BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012504
(462 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/458 (64%), Positives = 371/458 (81%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
+SR I+ L+Q SKT HL QLH+L LKT+ DHN +IS+FI + S+S+ F R +F+ LP
Sbjct: 1 MSRQIQILLQRSKTTTHLLQLHSLILKTAKDHNPDLISQFIFSISSVSIEFARLVFDRLP 60
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ P+FA+N++IRAY K+S IE++KLF +M + GL+PDNFTYPFVVKACGR L++G GG
Sbjct: 61 IRAPIFAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACGRSLVVGAGG 120
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
++HS+I K G DSD+Y+GNTLLRMYA + +A+ VF EM VRDVVSWSSMIAG+VAC+
Sbjct: 121 AMHSIIVKAGFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRDVVSWSSMIAGYVACN 180
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+DAL VF M LANE PNSVTLVSL+SACT L+N+ GESIHSY +VN + LDVALGT
Sbjct: 181 CQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVALGT 240
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
A++EMYSKCGH+EKA KVFN + EKNLQSWTIMISGLAD+ G AISLF +M QTGL+P
Sbjct: 241 AILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQP 300
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
DS+SFS ILSACSHLGLVDEG+ +F +M ++YNI+PTMEHYGCMVDM RAG+IEEAY I
Sbjct: 301 DSMSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEI 360
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+NMP EPN+VILRSF+GACRN G+V D+NL +LLL++EP+LGANYVLA+ VSSLSG
Sbjct: 361 IKNMPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGC 420
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
W+ AA+L V++ +KGL KVPG S V+V+ EE +E
Sbjct: 421 WNEAADLRVSMKEKGLKKVPGWSRVEVSGSHTEETIEE 458
>gi|356528208|ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 444
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/445 (61%), Positives = 328/445 (73%), Gaps = 3/445 (0%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP 65
I TLI SKT+ L QLH LFLKTSLDH+ IS+F+L S +ISL F S F++LP PP
Sbjct: 3 ICTLIHRSKTLTQLLQLHALFLKTSLDHHPFFISQFLLQSSTISLPFAASFFHSLPTLPP 62
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LFA+NTLIRA+A T S+ LF + + L PDNFTYPFV+KAC R + +GG++HS
Sbjct: 63 LFAWNTLIRAFAATPTPFHSLTLFRLLQTSPLNPDNFTYPFVLKACARSSSLPLGGTLHS 122
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K G S +++GN LL MYA C + A+ VF+EM RDVVSWSS+IA +VA +SP D
Sbjct: 123 LTLKTGFRSHRHVGNALLNMYAECYAVMSARMVFDEMTDRDVVSWSSLIAAYVASNSPLD 182
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A VF M + NE PNSVTLVSL+SACT +N+R GESIHSY NG+E+DVALGTAL E
Sbjct: 183 AFYVFREMGMENEQPNSVTLVSLLSACTKTLNLRVGESIHSYVTSNGIEMDVALGTALFE 242
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++KA VFN M +KNLQS TIMIS LAD+GR ISLF +M GL+ DS+S
Sbjct: 243 MYAKCGEIDKALLVFNSMGDKNLQSCTIMISALADHGREKDVISLFTQMEDGGLRLDSLS 302
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F+ ILSACSH+GLVDEGK YFD M RVY IKP++EHYGCMVD+LGRAG I+EAY II+ M
Sbjct: 303 FAVILSACSHMGLVDEGKMYFDRMVRVYGIKPSVEHYGCMVDLLGRAGFIQEAYDIIKGM 362
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P EPN VILRSFLGACRNHG V LDD+ L +LE ELGANYVL A+V S +W A
Sbjct: 363 PMEPNDVILRSFLGACRNHGWVPSLDDD---FLSELESELGANYVLTANVFSTCASWKDA 419
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
+L VA+ KGL KVPGCSWV+V +
Sbjct: 420 NDLRVAMKLKGLKKVPGCSWVEVQN 444
>gi|297746423|emb|CBI16479.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/358 (69%), Positives = 300/358 (83%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M + GL+PDNFTYPFVVKACGR L++G GG++HS+I K G DSD+Y+GNTLLRMYA
Sbjct: 1 MQRVGLKPDNFTYPFVVKACGRSLVVGAGGAMHSIIVKAGFDSDRYVGNTLLRMYANLNA 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+ +A+ VF EM VRDVVSWSSMIAG+VAC+ +DAL VF M LANE PNSVTLVSL+SA
Sbjct: 61 VGLARRVFNEMTVRDVVSWSSMIAGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSA 120
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
CT L+N+ GESIHSY +VN + LDVALGTA++EMYSKCGH+EKA KVFN + EKNLQSW
Sbjct: 121 CTRLLNIGVGESIHSYIIVNCIGLDVALGTAILEMYSKCGHIEKALKVFNSLTEKNLQSW 180
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
TIMISGLAD+ G AISLF +M QTGL+PDS+SFS ILSACSHLGLVDEG+ +F +M +
Sbjct: 181 TIMISGLADHSHGEDAISLFTQMEQTGLQPDSMSFSEILSACSHLGLVDEGQTFFSQMVK 240
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
+YNI+PTMEHYGCMVDM RAG+IEEAY II+NMP EPN+VILRSF+GACRN G+V D
Sbjct: 241 IYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRNDGRVFGFD 300
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+NL +LLL++EP+LGANYVLA+ VSSLSG W+ AA+L V++ +KGL KVPG S V+V+
Sbjct: 301 ENLRRLLLEIEPDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVS 358
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 137/265 (51%), Gaps = 4/265 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H++ +K D + + + + ++ ++ R +FN + V + +++++I Y +
Sbjct: 32 MHSIIVKAGFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRD-VVSWSSMIAGYVACN 90
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
C +++ +F M+ +P++ T ++ AC R L IG+G S+HS I + D +G
Sbjct: 91 CQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVALGT 150
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+L MY+ C I+ A VF + +++ SW+ MI+G DA+ +F +M+ P
Sbjct: 151 AILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQP 210
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+S++ ++SAC+ L V G++ S V + + + +V+M+++ G +E+A+++
Sbjct: 211 DSMSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEI 270
Query: 260 F-NLMREKNLQSWTIMISGLADNGR 283
N+ E N I ++GR
Sbjct: 271 IKNMPMEPNSVILRSFIGACRNDGR 295
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 278/448 (62%), Gaps = 7/448 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPL- 66
L+Q + L Q+HT LK L +N ++++F ++SL + + S + L
Sbjct: 35 LLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLY 94
Query: 67 --FAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
F +NTLIRAYA+T S + ++ L+ ML + P+ FTYPFV+KAC ++ +G +V
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKE-IDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H + K G D D ++ NT++ MY+ C I+ A+ VF+EMP D V+WS+MI G+
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++A+ +F M++A P+ +T+VS++SACT L + G+ I +Y + + V + A
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++M++KCG + KA K+F M EK + SWT +I G+A +GRG A LF +M +G+ PD
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F +LSACSH GLV+ G+ YF M + Y + P +EHYGCMVDM R GL++EA +
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV 394
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
RNMP EPN VILR+ + ACR HG+ L + + KLL+K EP +NYVL +++ + + +W
Sbjct: 395 RNMPIEPNPVILRTLVSACRGHGE-FKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSW 453
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+ ++ + KG+ KVPG + +++++
Sbjct: 454 EKKTKIREVMEVKGMKKVPGSTMIEIDN 481
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 278/442 (62%), Gaps = 13/442 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRS-LFNNLPVTPP----LFAYNTLIR 74
Q+H+L LK L HN ++++F TS ++H+ S LF N TPP F +NTLIR
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199
Query: 75 AYAKTSCS-IESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
A+A+T+ S +++ ++ M + + P+ FT+PFV+KAC + + +GG+VH+ + K G +
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259
Query: 134 SDKYIGNTLLRMYAACKEIDV-----AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
D ++ NTL+ MY C + AK VF+E PV+D V+WS+MI G+ + + A+
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVT 319
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M++ P+ +T+VS++SAC L + G+ + SY + V L AL++M++
Sbjct: 320 LFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFA 379
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG V++A KVF M+ + + SWT MI GLA +GRG A+ +F +M++ G+ PD ++F
Sbjct: 380 KCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIG 439
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH GLVD+G YF+ M +++I P +EHYGCMVDML RAG + EA +R MP E
Sbjct: 440 VLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE 499
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
PN VI RS + AC G+ L L +++ K L++ EP +NYVL +++ + W+ ++
Sbjct: 500 PNQVIWRSIVTACHARGE-LKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKV 558
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
++ KG+ K+PG + +++N+
Sbjct: 559 REMMDVKGMRKIPGSTMIEMNN 580
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 280/481 (58%), Gaps = 37/481 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
L+Q + L Q+H LKT L + S+ F + S SL + R++F+ + P
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-FRPN 82
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR Y+ + E++ L+ ML + + +T+PF++KAC + +H+
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHA 142
Query: 126 LIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEIDV 154
I K+G S+ Y N+LL +Y+ C EI++
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A +F MP R+++SW+SMI+G V P +AL +FHRM+ A ++V LVS + AC
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ IH+Y + +E+D LG L++MY+KCG +E+A +VF M EK + WT M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A +GRG A+ F KM G++P+ ++F+ IL+ACSH GLV E K F+ M R++
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
KP++EHYGCMVD+LGRAGL++EA +I NMP +PNA I + L AC HG L L +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN-LELGKQI 441
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
GK+L++++P G Y+ AS+ + +G W+ AA + + ++G++K+PGCS + VN G+A
Sbjct: 442 GKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN-GTAH 500
Query: 455 E 455
E
Sbjct: 501 E 501
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 286/487 (58%), Gaps = 41/487 (8%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-----FTRSLFNNL 60
I + +++ ++ LHQ H LK+ L H+T SR I S+S + H + S+F+ +
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLI-ASVSTNSHAQAIPYAHSIFSRI 68
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P P + +NT+IRAYA + ++ +F +ML + PD +T+ F +K+CG + G
Sbjct: 69 P-NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK------------------------ 156
+H + K GL D +I NTL+ +YA+C I+ A+
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 157 --------AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
VF E PV++VVSW++MI G+ S+ L +F M+ A P++ TLVS+
Sbjct: 188 GLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSV 247
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+SAC + + GE +H+Y NG+ +D + TALV+MYSKCG +EKA +VFN K++
Sbjct: 248 LSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDI 307
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+W +ISGL+ +G G +A+ +F++M+ G KP+ ++F +LSACS GL+DEG+ F+
Sbjct: 308 STWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNL 367
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M V+ I+PT+EHYGCMVD+LGR GL+EEA +++ MP + +V+ S LGACRNHG V
Sbjct: 368 MVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNV- 426
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L + + + LL+L P+ +++V +++ + G W E+ + +G+ K PGCS ++V
Sbjct: 427 ELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEV 486
Query: 449 NDGSAEE 455
DG+ E
Sbjct: 487 -DGTVYE 492
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/520 (37%), Positives = 289/520 (55%), Gaps = 74/520 (14%)
Query: 10 IQLSKTVHHLHQLHTLFLKT--SLDHNTCIISRF---ILTSLSISLHFTRSLFNNLPVTP 64
+Q K++ L Q+H +KT S D I +R SL I + SL L TP
Sbjct: 44 LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR-TP 102
Query: 65 PLFAYNTLIRAYAKTSC-SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L YN +IR A ++ SIE + ++ +ML G+ PDN+T PFV+KAC + G V
Sbjct: 103 NLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEV 162
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV----- 178
H K+GL SD Y+ NTL+RMYA C I A+ VF+ P RD+VSW++MI G+V
Sbjct: 163 HGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFA 222
Query: 179 -----------------------------ACDSPSDALKVFHRMKLAN------------ 197
C + A KVF M + N
Sbjct: 223 REGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLA 282
Query: 198 ------ES-------------PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
ES P+ VTLV+++++C +L + G+ +H+Y N + D
Sbjct: 283 QKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGF 342
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G ALV+MY+KCG +++A VF M K++ S+T MI GLA +G+G A+ LF++M + G
Sbjct: 343 IGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG 402
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++PD ++F +L+ACSH+GLV+EG+ YF++M+ +YN++P +EHYGCMVD+LGRAGLI EA
Sbjct: 403 IEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEA 462
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
IRNMP EP+A +L + LGAC+ HG+V L +++ K + K+EP YVL +++ S
Sbjct: 463 EEFIRNMPIEPDAFVLGALLGACKIHGKV-ELGESVMKKIEKIEPRKDGAYVLMSNIYSS 521
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSK 458
+ W A +L + ++ L K PGCS +++ DG E K
Sbjct: 522 ANRWRDALKLRKTMKERNLEKTPGCSSIEL-DGVIHEFQK 560
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 279/481 (58%), Gaps = 37/481 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
L+Q + L Q+H LKT L + S+ F + S SL + R++F+ + P
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-FRPN 82
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR Y+ + E++ L+ ML + + +T+PF++KAC +H+
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHA 142
Query: 126 LIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEIDV 154
I K+G S+ Y N+LL +Y+ C EI++
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A +F MP R+++SW+SMI+G V P +AL +FHRM+ A ++V LVS + AC
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ IH+Y + +E+D LG L++MY+KCG +E+A +VF M EK + WT M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A +GRG A+ F KM G++P+ ++F+ IL+ACSH GLV E K F+ M R++
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
KP++EHYGCMVD+LGRAGL++EA +I NMP +PNA I + L AC HG L L +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN-LELGKQI 441
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
GK+L++++P G Y+ AS+ + +G W+ AA + + ++G++K+PGCS + VN G+A
Sbjct: 442 GKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN-GTAH 500
Query: 455 E 455
E
Sbjct: 501 E 501
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 278/484 (57%), Gaps = 42/484 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLP 61
S H+ +L++ + HLHQ H L LD + ++SRFI S+ H++ S+F +
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTH-K 99
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ YNT+I+A + + E+I L++ +L + LR D ++ PFV+KA R L I +G
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------------------- 150
+H GL SD ++ L++MY++C
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVG 219
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++D A+ +FE MP R+V+SW+++IAG+ D P++A+ +F RM+L P+ + +++ +S
Sbjct: 220 DVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALS 279
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC L + GE IH+Y +GL V L AL++MY+KCG +EKA +VF M K++ +
Sbjct: 280 ACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVIT 339
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT MI GLA +G G A+ +F+ M + +KP+ I+F AILSAC H+GLV+ G+ YF M
Sbjct: 340 WTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMG 399
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
Y IKP ++HYGCM+D+LGRAG ++EA ++R MP E NA I S L A R HG
Sbjct: 400 TKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG----- 454
Query: 391 DDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
D LGK L+K+EP NY L +++ + W+ A + + G+ K+PG S +
Sbjct: 455 DAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCI 514
Query: 447 KVND 450
+VN+
Sbjct: 515 EVNN 518
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 278/484 (57%), Gaps = 42/484 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLP 61
S H+ +L++ + HLHQ H L LD + ++SRFI S+ H++ S+F +
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTH-K 99
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ YNT+I+A + + E+I L++ +L + LR D ++ PFV+KA R L I +G
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------------------- 150
+H GL SD ++ L++MY++C
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVG 219
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++D A+ +FE MP R+V+SW+++IAG+ D P++A+ +F RM+L P+ + +++ +S
Sbjct: 220 DVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALS 279
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC L + GE IH+Y +GL V L AL++MY+KCG +EKA +VF M K++ +
Sbjct: 280 ACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVIT 339
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT MI GLA +G G A+ +F+ M + +KP+ I+F AILSAC H+GLV+ G+ YF M
Sbjct: 340 WTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMG 399
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
Y IKP ++HYGCM+D+LGRAG ++EA ++R MP E NA I S L A R HG
Sbjct: 400 TKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG----- 454
Query: 391 DDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
D LGK L+K+EP NY L +++ + W+ A + + G+ K+PG S +
Sbjct: 455 DAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCI 514
Query: 447 KVND 450
+VN+
Sbjct: 515 EVNN 518
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 278/438 (63%), Gaps = 10/438 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTPPLFAYNTL 72
++H+++LH LKT ++ + R +L+ S SL + RS+F+ L P FA+NT+
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFD-LIAFPDTFAFNTI 59
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA+A +S S+ LF +M G+ PD+FT+PFV+KAC R + G +HSL+FK+G
Sbjct: 60 IRAHADSS-PSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGF 115
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSD Y+ N L+ Y C +D A VFEEMP RD+VSWSSMIA F +AL +F R
Sbjct: 116 DSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQR 175
Query: 193 MKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+L P+ V ++S+VSA + L ++ G+ I + NGLE V+LGTALV+M+S+CG
Sbjct: 176 MQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCG 235
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E++ +VF+ M E+N+ +WT +I+GLA +GR A+ +F +M G +PD ++F+ +L
Sbjct: 236 CIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLV 295
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH GLV EG + F+ + Y ++P EHYGCMVD+LGRAGL+ EA + MP PN+
Sbjct: 296 ACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNS 355
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+I R+ LGAC NH + L + + + + +L+ +YVL ++V G W A + +
Sbjct: 356 IIWRTLLGACVNHNYI-ELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNS 414
Query: 432 INQKGLNKVPGCSWVKVN 449
+ +K ++K PGCS + VN
Sbjct: 415 MREKRISKKPGCSLINVN 432
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 277/438 (63%), Gaps = 10/438 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTPPLFAYNTL 72
++H+++LH LKT ++ + R +L+ S SL + RS+F+ L P FA+NT+
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFD-LIAFPDTFAFNTI 59
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA+A +S S+ LF +M G+ PD+FT+PFV+KAC R + G +HSL+FK+G
Sbjct: 60 IRAHADSS-PSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGF 115
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSD Y+ N L+ Y C +D A FEEMP RD+VSWSSMIA F +AL +F R
Sbjct: 116 DSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQR 175
Query: 193 MKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+L P+ V ++S+VSA + L ++ G+ I + NGLE V+LGTALV+M+S+CG
Sbjct: 176 MQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCG 235
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E++ +VF+ M E+N+ +WT +I+GLA +GR A+ +F +M G +PD ++F+ +L
Sbjct: 236 CIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLV 295
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH GLV EG + F+ + Y ++P EHYGCMVD+LGRAGL+ EA + MP PN+
Sbjct: 296 ACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNS 355
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+I R+ LGAC NH + L + + + + +L+ +YVL ++V G W A + +
Sbjct: 356 IIWRTLLGACVNHNYI-ELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNS 414
Query: 432 INQKGLNKVPGCSWVKVN 449
+ +K ++K PGCS + VN
Sbjct: 415 MREKRISKKPGCSLINVN 432
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 276/447 (61%), Gaps = 12/447 (2%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLF---NNLPVTPP----L 66
T+ L Q+H LKT L +N I+++F TS ++ S+H+ S ++ TP
Sbjct: 30 TLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDA 89
Query: 67 FAYNTLIRAYAKTSCSIESIKLF-DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NTLIRAY++T S + LF ML+ G+ P+ FT+PFV+K C + +G VH
Sbjct: 90 FLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHG 149
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKE--IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ K G + D ++ NTL+ MY E + A+ VF++ P D V+WS+MIAGFV
Sbjct: 150 CVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCS 209
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
S A+ +F M++ P+ +T+VS++SAC L + G+ + SY + V L AL
Sbjct: 210 SRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNAL 269
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++M++KCG+V+KA K+F M + + SWT +I+GLA +GRG A+SLF +M++ G+ PD
Sbjct: 270 IDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDD 329
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F +LSACSH GLVD+G+ YF M R ++I P +EHYGCMVD+L R G ++EA+ ++
Sbjct: 330 VAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQ 389
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP EPN +I R+ + AC G+ L L +++ K L+K EP +NYVL +++ + W+
Sbjct: 390 KMPFEPNQIIWRTIITACHATGE-LKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWE 448
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
++ ++ +G+ KVPG + ++VN+
Sbjct: 449 KKTKVREMMDMRGMKKVPGSTMIEVNN 475
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 272/441 (61%), Gaps = 4/441 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H L +K + + + I + + + R +F+ + + +N++ Y K
Sbjct: 144 EQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMS-ERNVRTWNSMFAGYTK 202
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E +KLF EML+ +R D T V+ ACGR + +G ++ + + GL + +
Sbjct: 203 SGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTL 262
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+L+ MYA C ++D A+ +F++M RDVV+WS+MI+G+ +AL +FH M+ AN
Sbjct: 263 ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANI 322
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN +T+VS++S+C L + G+ +H + ++L V LGTAL++ Y+KCG VE + +
Sbjct: 323 DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIE 382
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M KN+ SWT++I GLA NG+G A+ F M++ ++P+ ++F +LSACSH GL
Sbjct: 383 VFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGL 442
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VDEG++ F M+R + I+P +EHYGCMVD+LGRAGLIEEA+ I+NMP +PNAVI R+ L
Sbjct: 443 VDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL 502
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
+C+ H V +++L +L++ LEP +Y+L +++ + G W+ A ++ + +KG+
Sbjct: 503 ASCKVHKNVEIGEESLKQLII-LEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Query: 439 KVPGCSWVKVNDGSAEEMSKE 459
K PGCS +++ DG E E
Sbjct: 562 KTPGCSLIEL-DGVIHEFFAE 581
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 210/367 (57%), Gaps = 13/367 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNNL--PVT 63
+++ KT+ L+++H +KT L + + ++ L S+ + S+F + P +
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P AYN +IR + E+I LF EM + ++PD FT+P ++K C R + G +
Sbjct: 90 P---AYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQI 146
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+LI K G S ++ NTL+ MYA C E++VA+ VF+EM R+V +W+SM AG+ +
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ +K+FH M + + VTLVS+++AC L ++ GE I+ Y GL+ + L T+L
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY+KCG V+ A ++F+ M +++ +W+ MISG + R A+ LF +M + + P+
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326
Query: 304 ISFSAILSACSHLGLVDEGK--NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
I+ +ILS+C+ LG ++ GK ++F + R +K T+ ++D + G +E + +
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKR---MKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 362 IRNMPTE 368
MP +
Sbjct: 384 FGKMPVK 390
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 280/447 (62%), Gaps = 6/447 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTP--P 65
++Q T+ L QLHT +K +N ++++F S ++ ++ + SL ++
Sbjct: 13 ILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYD 72
Query: 66 LFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F ++T+IRAYA++S S +I ++ ML G+ P+ + +PFV+KAC + +G +VH
Sbjct: 73 AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVH 132
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKE-IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ K G D D ++ NT++ MY C ++ A+ +F+EMP D V+W++MI G+
Sbjct: 133 GSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQS 192
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ A+ +F +M++A P+ VT+VS++SACT L + G+ I SY + V L AL
Sbjct: 193 AGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNAL 252
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+M++KCG V+KA +F M ++ + SWT +I GLA +GRG A+SLF +M +G+ P+
Sbjct: 253 VDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPED 312
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
I+F +LSACSH GLV+ G+ YF EM R + I P +EHYGCMVD+L RAGL+ EA +
Sbjct: 313 IAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVE 372
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP EPN +I R+ + ACR HG+ L L +++ K L++ EP +NYVL +++ +W+
Sbjct: 373 RMPIEPNPIIWRTLISACRVHGE-LKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWE 431
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
+++ VA+ +KG+ KVPG + +++++
Sbjct: 432 KKSKIRVAMGKKGIQKVPGSTMIELDN 458
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/465 (39%), Positives = 271/465 (58%), Gaps = 19/465 (4%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTP 64
+LI L Q+H L+T L + SR I S SL + + +F+ +P P
Sbjct: 40 SLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP-HP 98
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L+ +NTLIRAYA +S +S+ +F ML ++ PD FT+PF++KA + G +
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H ++ KV L SD +I N+L+ YA C E+ + VF P RDVVSW+SMI FV P
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL++F M+ N PN +T+V ++SAC + G +HSY N + + L A+
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAM 278
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI------------SGLADNGRGNYAISLF 291
++MY+KCG VE A ++F+ M EK++ SWT M+ GLA +G G AI+LF
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALF 338
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+KM + +KP++++F+ IL ACSH+GLV+EG+ +F++M VY + P ++HY CMVD+LGR
Sbjct: 339 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 398
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
AGL+EEA +I MP P A + + LGAC H V+ L + L++LEP YVL
Sbjct: 399 AGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV-LAEQACSQLIELEPGNHGAYVL 457
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+++ + +G WD + L + GL K PGCS ++V DG E
Sbjct: 458 LSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEV-DGIVHEF 501
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 286/456 (62%), Gaps = 17/456 (3%)
Query: 7 ETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFIL-TSLSISLHFTRSLFNNLPV 62
+TL+ L T++HL Q+H T +HN + + I+ ++S ++++ ++F+ +P
Sbjct: 13 QTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIP- 71
Query: 63 TPPLFAYNTLIRAYAK-TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P F +NT+IR + T+ S +I F M + RPDNFT+ F++K R + +G
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRM-QLAHRPDNFTFSFILKIIARLRFVNLGK 130
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H +FK G ++ Y+ N+L+ MY K+I++A +FEEM ++VSW+S+I V C
Sbjct: 131 QLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCG 190
Query: 182 SPSDALKVFHRMKLANES-----PNSVTLVSLVSACTSLINVRAGESIHSYAV--VNGLE 234
++A+ +F +M + P+ TLV +SAC ++ ++ G +HS+ VN
Sbjct: 191 KYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFG 250
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+++ ALV+MY+KCG VE+A++ F+ M+ KN+ SW +MI G A +G G A++LF +M
Sbjct: 251 ESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRM 310
Query: 295 IQTGL-KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + +PD I+F +L ACSH GLVDEG+ YF+ M R YNIKPT++HYGCMVD+LGRAG
Sbjct: 311 LHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAG 370
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L EAY +I++MP E NA+I R+ L ACRN+G V L + + K L++LEP+ ++YVL A
Sbjct: 371 LFVEAYELIKSMPVECNAIIWRTLLAACRNYGNV-ELGEKVRKHLMELEPDHSSDYVLLA 429
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKV-PGCSWVKV 448
++ + +G W+ ++ ++ ++ + K PG S++ +
Sbjct: 430 NMYASTGQWNEMSKERRSMQERRVRKPEPGNSFIGI 465
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 275/502 (54%), Gaps = 68/502 (13%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L Q+H + + NT + I S +S ++ + LF ++ P F +NT
Sbjct: 25 TIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHI-TEPDTFMWNT 83
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+IR A++ + +I L+ +M +RPD FT+PFV+KAC R + +G VH +F++G
Sbjct: 84 MIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLG 143
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKA-------------------------------VFE 160
+S+ ++ NTL+ +A C ++ VA+A +F+
Sbjct: 144 FESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFD 203
Query: 161 EMPV-------------------------------RDVVSWSSMIAGFVACDSPSDALKV 189
EMPV RDVV+W++MIAG+V C S AL++
Sbjct: 204 EMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEM 263
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMYS 248
F M+ E P+ VT++SL+SACT L ++ AG+ IH G +L V LG AL++MY+
Sbjct: 264 FEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYA 323
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + +A +VF MREK++ +W ++ GLA +G +I LF +M + ++PD I+F
Sbjct: 324 KCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVG 383
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH G V+EG+ YFD M YNI+P + HYGCMVD+LGRAGL+ EA+ I M E
Sbjct: 384 VLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE 443
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
PNA++ R+ LGACR HG V L LLK+ + +YVL +++ + G WD ++
Sbjct: 444 PNAIVWRTLLGACRIHGNV-ELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKV 502
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
++ G+ K GCS ++ ++
Sbjct: 503 RKLMDDSGVRKEAGCSLIEGDN 524
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 277/482 (57%), Gaps = 37/482 (7%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTP 64
+L++ + L Q+H LK + +SR + T S+ +L + R +F+ + +P
Sbjct: 16 SLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRIS-SP 74
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+NT+IRAY+ ++ E++ L+ +ML + + +T+PF++KAC + +H
Sbjct: 75 NTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIH 134
Query: 125 SLIFKVGLDSDKYIGNTLLRMYA-------------------------------ACKEID 153
I K G S+ Y N+LLR+YA C ++
Sbjct: 135 VQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVE 194
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+A +F+ MP ++V+SW+SMI GFV +AL + +M +A P+ +TL +SAC
Sbjct: 195 MAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACA 254
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L + G+ IH+Y N +++D LG AL++MY KCG ++KA VF+ + +K + +WT
Sbjct: 255 GLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTA 314
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+I G A +G+G+ A+ F +M + G+KP S +F+A+L+ACSH GLV+EGK+ F+ M+ Y
Sbjct: 315 IIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFY 374
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
N+KP MEHYGCMVD+LGRAG ++EA + +MP +PNA I S L AC H L L
Sbjct: 375 NMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKH-LELGKE 433
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
+GK L++L+PE Y+ AS+ + +G WD A+++ I KGL +PGCS + +N G A
Sbjct: 434 IGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLN-GVA 492
Query: 454 EE 455
E
Sbjct: 493 HE 494
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 266/447 (59%), Gaps = 4/447 (0%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTL 72
K + Q+H L LK+ N + + I + + R +F+ +P + A+N++
Sbjct: 135 KALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP-ERSIVAWNSM 193
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+ Y K E +KLF ++L+ + D+ T V+ ACGR + IG + I GL
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ + +L+ MYA C ++D A+ +F+EM RDVV+WS+MI+G+ D +AL +FH
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ N PN VT+VS++ +C L G+ +H Y ++L V LGT L++ Y+KCG+
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++++ +VF M KN+ +WT +I GLA+NG G A+ F+ M++ +KP+ ++F +LSA
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH LVD+G++ F+ M R ++I+P +EHYGCMVD+LGRAG +EEAY I NMP PNAV
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ R+ L +CR H + + +L + + +LEP +Y+L ++ +L G + A + I
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSL-EHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLI 552
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+K + K+PGCS +++ DG E E
Sbjct: 553 KEKEIKKIPGCSLIEL-DGVVHEFFSE 578
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 213/384 (55%), Gaps = 12/384 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTS--LDHNTCIISRFILTSLSI----SLHFTRSLFNNLPV 62
++Q KT L Q+H LKT LD II+ +L S ++ ++ + S+FN++
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDP---IITEAVLESAALLLPDTIDYALSIFNHID- 82
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P AYN +IR A ++ LF +M + ++ D FT+ V+KAC R + G
Sbjct: 83 KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQ 142
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH+LI K G S++++ NTL++MYA C +I VA+ VF+ MP R +V+W+SM++G+
Sbjct: 143 VHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGL 202
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+ +K+F ++ + VT++S++ AC L N+ GE I Y V GL + L T+
Sbjct: 203 WDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTS 262
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY+KCG V+ A K+F+ M ++++ +W+ MISG A R A++LF +M + + P+
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPN 322
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ ++L +C+ LG + GK + + +K T+ ++D + G I+ + +
Sbjct: 323 EVTMVSVLYSCAMLGAYETGK-WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF 381
Query: 363 RNMPTEPNAVILRSFLGACRNHGQ 386
+ M + N + + N+G+
Sbjct: 382 KEMSFK-NVFTWTALIQGLANNGE 404
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 281/485 (57%), Gaps = 43/485 (8%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH----FTRSLF 57
I RH+ + KT+ L Q+H + T + + + SR IL+ ++S H + R LF
Sbjct: 38 ILRHLSS----CKTLKDLTQIHAQTITTGIFSDNFVASR-ILSFAALSPHGSIPYARFLF 92
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLL 116
+ P +F NTLIRAYA + I+++ + EM ++ + PD T+P ++KAC
Sbjct: 93 YRI-RKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPS 151
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA--------------------- 155
+ +G ++HS +FK+G S+ + N L++MYA+C I+ A
Sbjct: 152 LRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGG 211
Query: 156 ----------KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
+ +FE MP RDVVSWS MI G+V + L +F M PN L
Sbjct: 212 YLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVL 271
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
V+ +SAC L + G+ I Y + L V LGTAL++MYSKCG VE+A +VF+ M+E
Sbjct: 272 VNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKE 331
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
KN+ +W+ MI+GLA NG+G A++LF++M G+KP+ ++F IL+ACSH LVDEG ++
Sbjct: 332 KNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSF 391
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
F M +Y +KP H+ CMVD+ GRAG++++A +I++MP +PN+ I + L ACR HG
Sbjct: 392 FHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
L + +GK LL+L+P G YVL +++ + G WD AEL + ++ ++K PGCS+
Sbjct: 452 DT-ELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSF 510
Query: 446 VKVND 450
+ + D
Sbjct: 511 IDLGD 515
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 276/448 (61%), Gaps = 5/448 (1%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
S+ V ++H +K L + + + + + ++ + R +F+ P L ++ T
Sbjct: 138 SRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSP-QRDLVSWTT 196
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK-V 130
+I+ Y K + E + LF EM L+ D T V+ +C R + +G +H I +
Sbjct: 197 MIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNS 256
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
++ D ++GN L+ MY C + + A+ VF+EMPV++VVSW+SMI+G ++L +F
Sbjct: 257 NVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMF 316
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+M+ P+ VTLV+++++C +L + G+ +H+Y N + D +G ALV+MY+KC
Sbjct: 317 RKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKC 376
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G +++A VF M K++ S+T MI GLA +G+G A+ LF++M + G++PD ++F +L
Sbjct: 377 GSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVL 436
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+ACSH+GLV+EG+ YF++M+ +YN++P +EHYGCMVD+LGRAGLI EA IRNMP EP+
Sbjct: 437 TACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPD 496
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
A +L + LGAC+ HG+V L +++ K + K+EP YVL +++ S + W A +L
Sbjct: 497 AFVLGALLGACKIHGKV-ELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 555
Query: 431 AINQKGLNKVPGCSWVKVNDGSAEEMSK 458
+ ++ L K PGCS +++ DG E K
Sbjct: 556 TMKERNLEKTPGCSSIEL-DGVIHEFQK 582
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 204/363 (56%), Gaps = 9/363 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKT--SLDHNTCIISRF---ILTSLSISLHFTRSLFNNLPVTP 64
+Q K++ L Q+H +KT S D I +R SL I + SL L TP
Sbjct: 29 LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR-TP 87
Query: 65 PLFAYNTLIRAYAKTSC-SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L YN +IR A ++ SIE + ++ +ML G+ PDN+T PFV+KAC + G V
Sbjct: 88 NLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEV 147
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H K+GL SD Y+ NTL+RMYA C I A+ VF+ P RD+VSW++MI G+V
Sbjct: 148 HGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFA 207
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTA 242
+ + +F M N + +TLV ++S+C L ++R G +H Y + N + LDV +G A
Sbjct: 208 REGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNA 267
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY KCG A KVF M KN+ SW MISGLA G+ ++ +F KM + G+KPD
Sbjct: 268 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 327
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ A+L++C++LG+++ GK + R I+ +VDM + G I++A +
Sbjct: 328 DVTLVAVLNSCANLGVLELGKWVHAYLDR-NQIRADGFIGNALVDMYAKCGSIDQACWVF 386
Query: 363 RNM 365
+ M
Sbjct: 387 QAM 389
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 170 WSSMIAGFVACDSPS-DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
++++I G ++ S + L V+ +M P++ T+ ++ AC VR GE +H A
Sbjct: 92 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 151
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ GL DV + L+ MY+ C + A KVF+ +++L SWT MI G G +
Sbjct: 152 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 211
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M L+ D ++ +LS+C+ LG + G+ + R N+ + +VDM
Sbjct: 212 GLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDM 271
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV---LYLDDNLGKLLLK 400
+ G A + + MP + N V S + GQ LY+ + +L +K
Sbjct: 272 YLKCGDANFARKVFQEMPVK-NVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 325
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 261/434 (60%), Gaps = 10/434 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRS---LFNNLPVTPPLFAYNT 71
V H+ Q+H L + L +T +++ I SLS S H + + L+N+L PP +N
Sbjct: 33 VKHVSQIHAQILVSGLQQDTNLLTELIRFCSLSPSKHLSYAHSLLYNSLDSLPP---WNF 89
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIR YA +I++F M K G+ P+NFT+PFV+KAC CL + G VH+ IFK G
Sbjct: 90 LIRGYASGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIFKFG 149
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
LD D Y+ N L+ +Y +CK I A VF+EMPVR +VSW+S+I V DA+ F
Sbjct: 150 LDCDVYVNNNLVHLYGSCKRIWDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAIWNFV 209
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+MK PN T+V ++S C + N+ G IHS + G+ L+ LGTALV+MY+K G
Sbjct: 210 KMKDFGFEPNETTMVIMLSLCAQIGNLSLGRWIHSQVIERGMTLNCQLGTALVDMYAKSG 269
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAIL 310
+ A VF+ M +KN+ +W+ MI GLA +G G + LF KM ++ + P+ ++F +L
Sbjct: 270 DLGYAKLVFDRMEKKNVWTWSAMILGLAQHGFGKEGLELFLKMKESVSICPNYVTFLGVL 329
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
ACSH GLVDEG YF EM + I+P + HYG MVD+LGRAG +EEAY+ + ++P +P+
Sbjct: 330 CACSHAGLVDEGFRYFYEMEHRHGIRPMVIHYGAMVDILGRAGNLEEAYNFLMDVPFQPD 389
Query: 371 AVILRSFLGACRNHGQVLY--LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
++ R+ L AC H + L D + K LL+LEP N+V+ A++ + +G W+TA +
Sbjct: 390 PILWRTLLSACNIHNANVSDGLVDKVRKKLLELEPRRSENFVIIANMYADAGMWETATNV 449
Query: 429 MVAINQKGLNKVPG 442
+ GL K+ G
Sbjct: 450 RRTMRDGGLKKIGG 463
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 254/410 (61%), Gaps = 2/410 (0%)
Query: 41 FILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPD 100
F L S + + +F+ + P +F +NT+IR YA++ + +++L+ +M + + PD
Sbjct: 81 FTLLSFCSPMSYAHQIFSQIQ-NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPD 139
Query: 101 NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
TYPF++KA + + + G VHS+ + G +S ++ NTL+ MYAAC + A +FE
Sbjct: 140 THTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFE 199
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
M R++V+W+S+I G+ P++AL +F M L P+ T+VSL+SAC L +
Sbjct: 200 LMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALAL 259
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G H Y V GL+ ++ G AL+++Y+KCG + +A KVF+ M EK++ SWT +I GLA
Sbjct: 260 GRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAV 319
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG G A+ LF ++ + GL P I+F +L ACSH G+VDEG +YF M Y I P +E
Sbjct: 320 NGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIE 379
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGCMVD+LGRAGL+++A+ I+NMP +PNAV+ R+ LGAC HG L L + LL+
Sbjct: 380 HYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH-LALGEVARAQLLQ 438
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
LEP+ +YVL +++ + W ++ + ++G+ K PG S V++ +
Sbjct: 439 LEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRN 488
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 280/493 (56%), Gaps = 53/493 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L + K+++HL Q+H+ +KT + N I ++ F + + + R LF+ +P P
Sbjct: 19 SLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIP-EP 77
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+F++N + + Y++ +C + L+ EML+ ++PD +TYPF+ K R + + +G +H
Sbjct: 78 SVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELH 137
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------------------ 160
+ K GLDS+ + N L+ MY+ C ID+A+ +F+
Sbjct: 138 CHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDV 197
Query: 161 ------------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+MP RD VSW++MI G++ + +AL +F M+ +
Sbjct: 198 ISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+ T+VS+++AC L + GE I +Y N ++ D +G AL++MY KCG+VE A
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMA 317
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+FN + +++ +WT M+ GLA NG G A+++F++M++ + PD +++ +LSAC+H
Sbjct: 318 LSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHT 377
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
G+VDEGK +F M + I+P + HYGCMVD+LG+AG ++EA+ II+NMP +PN+++ +
Sbjct: 378 GMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGA 437
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H + + + +L+LEP GA YVL ++ + WD EL + +G
Sbjct: 438 LLGACRIHKDAEMAERAIEQ-ILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRG 496
Query: 437 LNKVPGCSWVKVN 449
+ K PGCS +++N
Sbjct: 497 IKKTPGCSLIEMN 509
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 271/448 (60%), Gaps = 12/448 (2%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS--LHFTRSLFNNLPVTPP 65
+LI + L H +F ++S H + ++T + S + + +F+ +PV
Sbjct: 106 SLISMYAQNGRLEDAHKVFDRSS--HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKD- 162
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N +I YA+T E+++LF EM+KT +RPD T V+ AC + + +G VHS
Sbjct: 163 VVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHS 222
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I G S+ I N L+ +Y+ C +++ A +FE + +DVVSW+++I G+ + +
Sbjct: 223 WIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 282
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV----ALGT 241
AL +F M + ESPN VT+VS++ AC L + G IH Y ++ DV +L T
Sbjct: 283 ALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVY--IDKKLKDVTNAPSLRT 340
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L++MY+KCG +E A +VFN M K+L SW MI G A +GR N LF++M + G++P
Sbjct: 341 SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEP 400
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+F +LSACSH G +D G++ F M + Y+I P +EHYGCM+D+LG +GL +EA +
Sbjct: 401 DDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEM 460
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ MP EP+ VI S L ACR HG L L ++ + L+K+EPE +YVL +++ + +G
Sbjct: 461 IKTMPMEPDGVIWCSLLKACRRHGN-LELAESFARNLMKVEPENPGSYVLLSNIYATAGE 519
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
WD A++ +N KG+ KVPGCS ++++
Sbjct: 520 WDEVAKVRALLNGKGMKKVPGCSSIEID 547
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 184/352 (52%), Gaps = 45/352 (12%)
Query: 57 FNNLPVTPPLFA---------YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFV 107
F+ P +FA +NT++R YA +S + ++KL+ M+ GL P+++T+PF+
Sbjct: 13 FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM---------------------- 145
+K+C + G +H + K+G + D Y+ +L+ M
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 146 ---------YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
YA+ I A+ +F+E+PV+DVVSW++MI+G+ S +AL++F M
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ T+V+++SAC +V G +HS+ +G ++ + AL+++YSKCG VE A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+F + K++ SW +I G A+ LF +M+++G P+ ++ +IL AC+HL
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312
Query: 317 GLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
G +D G+ Y D+ + P++ ++DM + G IE A+ + +M
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM 362
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 258/436 (59%), Gaps = 9/436 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q H L L+T L HN S+ F+ S S L++ R LF + P F NT+IR YA
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQ-NPDPFICNTMIRGYA 87
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++ E++ L+ M++ G+ DN+TYPFV+ AC R + +G H + K G SD +
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLA 196
+ N L++ Y C A VF+E VRDVV+W+ MI + A + M KL
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLEL--DVALGTALVEMYSKCGHV 253
N P+ VT+VSLV AC L N+ G+ +HSY+ ++ E+ D+ L TALV+MY+KCG +
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSI 267
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A +VF MR +N+ +W +I GLA +G G AISLF +M L PD ++F A+L AC
Sbjct: 268 DLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCAC 327
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GLVDEG F M + I+P MEHYGC+VD+L RA +++A I NMP + N+V+
Sbjct: 328 SHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVL 387
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
+ LGACR+ G L + +G+ +++LEP+ YV+ +++ + WD A +L +
Sbjct: 388 WATLLGACRSGGH-FDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 446
Query: 434 QKGLNKVPGCSWVKVN 449
KG+ K PGCSW+++N
Sbjct: 447 NKGIEKTPGCSWIELN 462
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 270/452 (59%), Gaps = 6/452 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFN 58
+ H +L+ ++ L QL +KT L + ++++FI L + S+ LF+
Sbjct: 20 TTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFD 79
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+P P + +NT+ R YA+T + + LF ++L +GL PD++T+P ++KAC C +
Sbjct: 80 QIP-QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALE 138
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H L K+GL + Y+ TL+ MY AC E+D A+ VF+++ VV++++MI G+
Sbjct: 139 EGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYA 198
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
P++AL +F ++ N P VT++S++S+C L + G+ +H Y NG V
Sbjct: 199 RGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVK 258
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ TAL++MY+KCG ++ A VF M ++ Q+W+ MI A +G G A+SLF +M + G
Sbjct: 259 VDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+PD I+F +L ACSH GLV+EG YF M Y + P ++HYGCMVD+LGRAG +EEA
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
Y I +P P ++ R+ L AC +HG V L + + + +L+ G +Y++ +++ +
Sbjct: 379 YEFIVGLPIRPTPILWRTLLSACGSHGNV-ELGKRVIEQIFELDDSHGGDYIILSNLCAR 437
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+G W+ + +N++G+ K+PGCS V+VN+
Sbjct: 438 AGRWEDVNYVRKLMNERGVVKIPGCSSVEVNN 469
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 279/462 (60%), Gaps = 7/462 (1%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPV 62
+ ++ + +++ HL QLH ++T L+ N ++ + I+ S S+ + +F +
Sbjct: 54 VMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIE- 112
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F +NT+IR +T ++ + + M G DNFTY F+VK CG+ +G
Sbjct: 113 NPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQ 172
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H + K GL+ ++ NTL+ MY K+I+ A +FEEMP +V+W+++I V C
Sbjct: 173 IHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGR 232
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A+++F RM + P+ T V +SAC +L + G +HS GL V++ +
Sbjct: 233 YKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNS 292
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KP 301
L++MY+KCG VE A+++FN M+ +N+ SW MI GLA +G G+ A+ LF+KM++ L P
Sbjct: 293 LIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATP 352
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++F +L ACSH G+V+EG+ YFD M R YNI+PT++HYG MVD+LGRAGL+EEAY +
Sbjct: 353 NEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRL 412
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I++MP E N+++ R+ L ACR HG L L + + + LL+LEP+ ++YVL A++ + +G
Sbjct: 413 IKSMPIESNSIVWRTLLAACRVHGN-LELAEQVRQXLLELEPDHSSDYVLLANMYASAGQ 471
Query: 422 WDTAAELMVAINQKGLNK-VPGCSWVKVNDGSAEEMSKETAA 462
W+ + +++ +G+ K PG S++ EM A+
Sbjct: 472 WNKVXRVRKSMHIRGVQKPKPGNSYIGFQPSMRLEMESTEAS 513
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 263/474 (55%), Gaps = 36/474 (7%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L Q H+ ++ L + + R F S S L++ +F+ +P P + YNT
Sbjct: 32 TMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIP-HPDAYIYNT 90
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+ R Y + + I ++ ML + P+ FTYP +++AC I G +H+ + K G
Sbjct: 91 IFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFG 150
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS------------------- 172
+D + N L+ MY + ++ A+ VF+ MP RDVVSW+S
Sbjct: 151 FGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210
Query: 173 ------------MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
MIA +V + +A +F RM+L N + S++SACT L +
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IH Y +G+ELD L T +++MY KCG +EKA +VFN + +K + SW MI GLA
Sbjct: 271 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAM 330
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G+G AI LF +M + + PD I+F +LSAC+H GLV+EGK+YF M V +KP ME
Sbjct: 331 HGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGME 390
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
H+GCMVD+LGRAGL+EEA +I MP P+A +L + +GACR HG L + +GK +++
Sbjct: 391 HFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNT-ELGEQIGKKVIE 449
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
LEP YVL A++ + +G W+ A++ +N +G+ K PG S ++ G E
Sbjct: 450 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDE 503
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 266/484 (54%), Gaps = 68/484 (14%)
Query: 30 SLDHNTCIISRFILTS---LSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESI 86
+ NT + I S +S ++ + LF ++ P F +NT+IR A++ + +I
Sbjct: 5 GFNSNTSALRELIYASSIAISGTMAYAHQLFPHI-TEPDTFMWNTMIRGSAQSPSPLNAI 63
Query: 87 KLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMY 146
L+ +M +RPD FT+PFV+KAC R + +G VH +F++G +S+ ++ NTL+ +
Sbjct: 64 SLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFH 123
Query: 147 AACKEIDVAKA-------------------------------VFEEMPV----------- 164
A C ++ VA+A +F+EMPV
Sbjct: 124 ANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMIT 183
Query: 165 --------------------RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
RDVV+W++MIAG+V C S AL++F M+ E P+ VT
Sbjct: 184 GYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVT 243
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
++SL+SACT L ++ AG+ IH G +L V LG AL++MY+KCG + +A +VF M
Sbjct: 244 MLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGM 303
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
REK++ +W ++ GLA +G +I LF +M + ++PD I+F +L ACSH G V+EG+
Sbjct: 304 REKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGR 363
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
YFD M YNI+P + HYGCMVD+LGRAGL+ EA+ I M EPNA++ R+ LGACR
Sbjct: 364 QYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRI 423
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
HG V L LLK+ + +YVL +++ + G WD ++ ++ G+ K GC
Sbjct: 424 HGNV-ELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGC 482
Query: 444 SWVK 447
S ++
Sbjct: 483 SLIE 486
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 273/480 (56%), Gaps = 41/480 (8%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCI-----ISRFILTSLSISLHFTRSLFNN 59
I +L KT+ HL Q+H + HN+ S L+ L + +++F++
Sbjct: 69 QILSLFNPCKTLRHLKQVHAQIIT---HHNSPFQLSALASLSALSPFPTFLAYAKTIFHH 125
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L PP YN+LIRA + + +E++ L+ ML++GL+PD+ TYPFV+KAC +
Sbjct: 126 LQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWF 184
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA---------------------- 157
G VH+ + K G + D YI ++L+ +YA K++ AK
Sbjct: 185 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 244
Query: 158 ---------VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
VF+ M RDV+SW++MI G+ C P++AL +F +M+ P T+VSL
Sbjct: 245 HVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSL 304
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+SAC L + G +H+Y N +E++ +GTALV+MY+KCG + A +VFN M K++
Sbjct: 305 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 364
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+W +I+G+A +G A LF +M + G++P+ I+F AILSACSH G+VDEG+ D
Sbjct: 365 LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC 424
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M+ Y I+P +EHYGC++D+L RAG +EEA +I MP EPN L + LG CR HG
Sbjct: 425 MSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGN-F 483
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L + +GK L+ L+P Y+L +++ + + WD A ++ + G++KVPG S +++
Sbjct: 484 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 543
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 273/485 (56%), Gaps = 48/485 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSIS-LHFTRSLFNNLPVTP 64
+L Q + QLH LKT++ ++ + SR + + I+ L + RS+F+ +
Sbjct: 21 SLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ-RR 79
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
L +NT+I+ Y + S + I LF E++ L PDNFT P V+K C R ++ G +H
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 138
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------------------ 160
L K+G SD ++ +L+ MY+ C EID A+ VF+
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAM 198
Query: 161 ------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
+MP+ D+V+W+ MIAG+ DA+K+F M P+
Sbjct: 199 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 258
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
TLVS++SA + L + G IHSY NG ELD LGT+L+EMY+KCG +E A VF
Sbjct: 259 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 318
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+++K + WT +I GL +G N+A++LF +M +TGLKP++I F +L+AC+H GLVD+G
Sbjct: 319 IQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDG 378
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+ YFD M Y I+PT+EHYGC+VD+L RAG +EEA + I NMP PN VI S LG R
Sbjct: 379 RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSR 438
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
NHG++ + + + ++++ PE Y+L +++ + SG W+ + + + ++G K PG
Sbjct: 439 NHGKI-DIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPG 497
Query: 443 CSWVK 447
CS V+
Sbjct: 498 CSSVE 502
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 279/490 (56%), Gaps = 53/490 (10%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL--TSLSI-SLHFTRSLFNNLPVTPP 65
L++ K++ HL Q+ T L+T + +++F++ T SI +LH+ +FN + + P
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDI-PG 96
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF YN +I+A+ K +++ LF ++ + GL PDNFTYPFV KA G + G V+
Sbjct: 97 LFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYG 156
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K GL+ D Y+ N+L+ MYA + + VFEEMP RDVVSW+ +I+G+V C D
Sbjct: 157 FVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYED 216
Query: 186 ALKVFHRMKLANESP--NSVTLVSLVSA---CTSLINVR-------AGESIHSYAVVNG- 232
A+ VF ++ N+ P + S+VS C L R + + A++NG
Sbjct: 217 AVDVFR--QIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGY 274
Query: 233 ------------------------------LELDVALGTALVEMYSKCGHVEKAFKVFNL 262
L D +GTAL+EMY+KCG +EK+ ++FN
Sbjct: 275 VQFNRFDDAVALFREMQIKRVSPDRFTLVALLTDAVVGTALIEMYAKCGFIEKSLEIFNG 334
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
++EK+ SWT +I GLA NG+ + A+ LFA+M+QTG+KPD I+F +LSACSH GLV+EG
Sbjct: 335 LKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG 394
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLG 379
+ +F M VY I+P +EHYGC++D+LGRAG ++EA +I P N VI+ + L
Sbjct: 395 RKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLS 454
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR HG V + + + K L+ +E + + L A++ + + W+ ++ + G+ K
Sbjct: 455 ACRTHGNV-EMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKK 513
Query: 440 VPGCSWVKVN 449
VPGCS V+VN
Sbjct: 514 VPGCSSVEVN 523
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 267/443 (60%), Gaps = 5/443 (1%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNNLPVTPPL 66
I+ V L + ++ +L +T + S+ I +S LS + + +F+ P L
Sbjct: 14 IKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS-CTHHPNL 72
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F +NT+IR Y+ + I +I L+ +M G+ P+++T+ FV+KAC + L + G +HS
Sbjct: 73 FMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQ 132
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I KVGLD + + N L+++YAAC +D A +F+EMP D SWS+M++G+ +A
Sbjct: 133 IVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEA 192
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LK+F M+ N S ++ TL S+V C L + G+ +HSY G+++DV LGTALV M
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGM 252
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG ++ A KVF M E+++ +W+ MI+G A +G G A+ LF M ++ P+ ++F
Sbjct: 253 YSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LSACSH GLV++G F+ M Y I P ++HYGCMVD+ RAG++ A+ I+ MP
Sbjct: 313 TSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMP 372
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EPN V+ R+ LGAC+ HG L +++ + +LKL+P NYVL ++V + G W +
Sbjct: 373 IEPNVVLWRTLLGACKTHG-YKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVC 431
Query: 427 ELMVAINQKGLNKVPGCSWVKVN 449
++ + K K G S +++N
Sbjct: 432 QVRSLMKDKAPKKQHGWSSIEIN 454
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 292/521 (56%), Gaps = 69/521 (13%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSL 56
MI + + +L+Q + ++ + Q+H L +KTSLD N ++++ + + S L + RS+
Sbjct: 1 MIGKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSV 60
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGR-- 113
F+ +P +P F +NT+IRAY + ES+ LF +M P D+++ V++ACGR
Sbjct: 61 FDEIP-SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLK 119
Query: 114 -----------CLLIGIGGSVH------SLIFKVG--------LDS----DKYIGNTLLR 144
L IG+G + + K G LD D N LL
Sbjct: 120 DPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLA 179
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSW-------------------------------SSM 173
Y EI++A +F+ MP RD+VSW SSM
Sbjct: 180 EYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSM 239
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA + ++AL++FH M+LAN P+ VT+VS++SAC + + G+ IH N +
Sbjct: 240 IAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRI 299
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E+D+ LGT+LV+MY+KCG ++ + +VFN M +++ +W+ MI GLA++G G A+ F+K
Sbjct: 300 EIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSK 359
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
MI +KP+ ++F +LSACSH+GLVDEG YF M++VY++ P +EHYGC+VD+LGRAG
Sbjct: 360 MISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAG 419
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
++EA +I++MP P+A++ R+ LGACR + V ++ LL+LEP + NYVL +
Sbjct: 420 RLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVN-LLELEPHVDGNYVLLS 478
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
++ S + WD + + + KVPG S ++V++ E
Sbjct: 479 NIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHE 519
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 277/494 (56%), Gaps = 43/494 (8%)
Query: 3 SRHIE-TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNL 60
S HI+ L Q ++ HL +H L+ LD ++ ++++ + S + + +++ +F+
Sbjct: 9 SAHIKIRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQT 68
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P +F +NT+I ESI+++ M K GL PD+FT+PF++KAC R L +G
Sbjct: 69 K-EPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLG 127
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR--------------- 165
+H L+ K G +SD ++ +L+ +Y C ID A VF+++P +
Sbjct: 128 IKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGV 187
Query: 166 -----------------------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
D+VSWSSMI G+ + P +AL +F +M P+
Sbjct: 188 GKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDC 247
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+V ++ AC L + G + N + LGTAL++MY+KCG ++ A++VF
Sbjct: 248 YAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRG 307
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
MR+K++ W ISGLA +G A LF +M ++G++PD +F +L AC+H GLVDEG
Sbjct: 308 MRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEG 367
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+ YF+ M RV+ + P +EHYGCMVD+LGRAG ++EA+ ++++MP E NA++ + LG CR
Sbjct: 368 RQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCR 427
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
H ++ L K L+ LEP NYVL +++ S S W+ AA++ ++++G+ KVPG
Sbjct: 428 LHRDTQLVEGVL-KQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPG 486
Query: 443 CSWVKVNDGSAEEM 456
SW++V DG E
Sbjct: 487 YSWIEV-DGVVHEF 499
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 286/492 (58%), Gaps = 53/492 (10%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
KT+ L QLH +KT+ + + RF S L + R +F ++ P F+YN
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMH-RPNCFSYN 80
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
TLIRA ++++ +++ +F EM++ + P+ FT+P V KACGR + G VH L K
Sbjct: 81 TLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVK 140
Query: 130 VGLDSDKYIGNTLLRMYAACK--------------------------------------- 150
GLDSD+++ + ++RMY +C
Sbjct: 141 FGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMI 200
Query: 151 -------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
E++VA+ +F+EMP R VVSW+ MIAG+ +A++VF M++A PN V
Sbjct: 201 DGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYV 260
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TLVS++ A + L + G+ +H YAV N + +D LG+AL++MY+KCG +EKA +VF +
Sbjct: 261 TLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGL 320
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
++N+ +W+ +I+GLA +GR + F M + G+ P +++ +LSACSH GLV+EG+
Sbjct: 321 PKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGR 380
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
+FD M RV ++P +EHYGCMVD+LGRAGL+EE+ +I NMP +P+ VI ++ LGAC+
Sbjct: 381 WFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKM 440
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
HG V + + + L++L P +YV +++ + GNW+ A++ + + + + K PGC
Sbjct: 441 HGNV-EMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGC 499
Query: 444 SWVKVNDGSAEE 455
SW+++ DG E
Sbjct: 500 SWIEL-DGVIHE 510
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 235/381 (61%), Gaps = 1/381 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ AY K +E +++F ML+ G+ D T VV ACGR +G V +
Sbjct: 189 WNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVD 248
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ GL + + L+ MYA C EI A+ +F+ M RDVV+WS+MI+G+ D +AL
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+LA PN VT+VS++SAC L + G+ +HSY L L LGTALV+ Y+
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYA 368
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ A + F M KN +WT +I G+A NGRG A+ LF+ M + G++P ++F
Sbjct: 369 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG 428
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH LV+EG+ +FD MAR Y IKP +EHYGCMVD+LGRAGL++EAY IR MP E
Sbjct: 429 VLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE 488
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
PNAVI R+ L +C H V ++ L K ++ L P +YVL +++ + +G W AA +
Sbjct: 489 PNAVIWRALLSSCAVHRNVGIGEEAL-KQIISLNPSHSGDYVLLSNIYASAGQWKDAAMV 547
Query: 429 MVAINQKGLNKVPGCSWVKVN 449
+ +G+ K PGCS ++++
Sbjct: 548 RKEMKDRGIEKTPGCSLIELD 568
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 188/358 (52%), Gaps = 9/358 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSIS---LHFTRSLFNNLPVTPPLFA--YNTL 72
+L QLH +K+ + +L + + S L + SLF P PPL YN L
Sbjct: 31 YLPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGP-RPPLSTPCYNVL 89
Query: 73 IRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+RA+ +++ LF EML + D T +K+C R + +G V + K
Sbjct: 90 MRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKR 149
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL +D+++ ++L+ MYA+C ++ A+ VF+ VV W++++A ++ + +++F
Sbjct: 150 GLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMF 209
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M + + VTLVS+V+AC + + + G+ + + GL + L TAL++MY+KC
Sbjct: 210 KGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKC 269
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + KA ++F+ M+ +++ +W+ MISG + A+ LF++M ++P+ ++ ++L
Sbjct: 270 GEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVL 329
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
SAC+ LG ++ GK + R + T +VD + G I++A +MP +
Sbjct: 330 SACAVLGALETGK-WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ + + + A++ +I Y + E++ LF EM + P++ T V+ AC
Sbjct: 275 ARRLFDGMQ-SRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACA 333
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G VHS + + L +G L+ YA C ID A FE MPV++ +W++
Sbjct: 334 VLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 393
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVN 231
+I G +AL++F M+ A P VT + ++ AC+ V G S A
Sbjct: 394 LIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDY 453
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLA 279
G++ V +V++ + G V++A++ M E N W ++S A
Sbjct: 454 GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCA 502
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/434 (39%), Positives = 257/434 (59%), Gaps = 37/434 (8%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S SL + R +FN +P P F N++IR Y + ++I + M+ GL PD FT+P
Sbjct: 25 SGSLPYARLVFNQIP-NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS 83
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+ K+CG ++ G +H K+G SD YI NTL+ MY+ C + A+ VF++M +
Sbjct: 84 LFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 140
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLA--------------------------NE-- 198
VVSW++MI + D P +A+K+F RM++A NE
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200
Query: 199 ----SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ VT+ SL+ ACT L + G+ +H Y +E+DVALGTALV+MY+KCG +E
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +VF M EK++ +WT +I GLA G+G A+ LF +M + +KPD+I+F +L+ACS
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLV+EG YF+ M Y I+P++EHYGCMVDMLGRAG I EA +I+NMP P+ +L
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 380
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
L ACR HG L + + + L++L+P+ G YVL +++ S NW+ A ++ + +
Sbjct: 381 VGLLSACRIHGN-LVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 439
Query: 435 KGLNKVPGCSWVKV 448
+ + K PGCS ++V
Sbjct: 440 RNIKKPPGCSAIEV 453
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 283/450 (62%), Gaps = 10/450 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTL 72
++++++LH +K+S ++ + +L+ ++ SL + R +F+ +P +P AYNT+
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIP-SPDTIAYNTI 59
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR++++ S S+ F M G+ DNFT+PFV+KAC R + I +HSLI K GL
Sbjct: 60 IRSHSRFFPS-HSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGL 115
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSD ++ N L+ +Y C +++A VF+EM RD VSWS++IA F+ S+AL +F +
Sbjct: 116 DSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEK 175
Query: 193 MKLANES-PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+L ++ P+ VT++S++SA + L ++ G + ++ GL + VALGTAL++M+S+CG
Sbjct: 176 MQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCG 235
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++++ VF M +N+ +WT +I+GL +GR A+++F M ++G++PD ++FS +L
Sbjct: 236 SIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLV 295
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH GLV EG + F+ + +VY + P ++HYGCMVD+LGRAGL+ EAY + MP +PN+
Sbjct: 296 ACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNS 355
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+I R+ LGAC NH L L + + + K+ + VL ++V +G W A +
Sbjct: 356 IIWRTLLGACVNHNN-LGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSK 414
Query: 432 INQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ +K + K PGCS + V+ E +S + +
Sbjct: 415 MREKRIGKEPGCSSINVDQTIHEFVSGDNS 444
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 268/450 (59%), Gaps = 23/450 (5%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
L+Q + L Q+H LKT L + S+ F + S SL + R++F+ + P
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-FRPN 82
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR Y+ + E++ L+ ML + + +T+PF++KAC + +H+
Sbjct: 83 TFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHA 142
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K+G S+ Y N+LL +Y+ +I A+ +F+++ RD ++
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD-----------------TE 185
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +FHRM+ A ++V LVS + AC L + G+ IH+Y + +E+D LG L++
Sbjct: 186 ALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLID 245
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG +E+A +VF M EK + WT MISG A +GRG A+ F KM G++P+ ++
Sbjct: 246 MYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMT 305
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F+ IL+ACSH GLV E K F+ M R++ KP++EHYGCMVD+LGRAGL++EA +I NM
Sbjct: 306 FTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM 365
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +PNA I + L AC HG L L +GK+L++++P G Y+ AS+ + +G W+ A
Sbjct: 366 PVKPNAAIWGALLNACHIHGN-LELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQA 424
Query: 426 AELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
A + + ++G++K+PGCS + VN G+A E
Sbjct: 425 ARVRRQMKEQGVSKLPGCSVISVN-GTAHE 453
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 279/470 (59%), Gaps = 37/470 (7%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
++ L ++H +KT L +T SR + TS + +++ +F + P LF +NT+
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIR-NPNLFVWNTI 66
Query: 73 IRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
IR ++++S +I LF +M+ T +P TYP V KA + L G +H + K+
Sbjct: 67 IRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKL 126
Query: 131 GLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAVF 159
GL++D++I NT+L MY A C EID ++ +F
Sbjct: 127 GLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLF 186
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
++M +R+ VSW+SMI+G+V +A+++F RM+ P+ T+VSL++AC L +R
Sbjct: 187 DKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALR 246
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
GE IH Y V N L+ + TA+++MYSKCG ++KA +VF +K L W +I GLA
Sbjct: 247 QGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLA 306
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+GRGN A+ LF+K+ + LKPD +SF +L+AC+H G+VD K+YF M+ Y I+P++
Sbjct: 307 MSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSI 366
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+HY CMVD+LGRAGL+EEA +I++MP P+A+I S L +CR +G + + K +
Sbjct: 367 KHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNI-EMAKQAAKRVN 425
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+L+P ++++L ++V + +++ A E +++ +K ++K PGCS ++VN
Sbjct: 426 ELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVN 475
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 238/381 (62%), Gaps = 1/381 (0%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IR Y ++ + S+ ++ +M K G+ PD+ T+P V+K+ + +G ++H I +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G +S+ Y+ L+ MY C + A+ VF+E+P R++VSW+++I G+ + V
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M++A P VT+V ++ AC L + G I Y N L L+V +GTAL++MY+K
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAK 290
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG V++A K+F MR KN+ +W ++ISG A NGRG A+ F++MI KPD ++F +
Sbjct: 291 CGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L AC H GLV+EG+ YF M + ++P +EHYGCMVD+LGRAG ++EA +I+ M +P
Sbjct: 351 LCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQP 410
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
+ +I R LGACR HG + L + K LL+LEP G NYVL A++ + WD E+
Sbjct: 411 DPIIWRELLGACRIHGNI-QLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVR 469
Query: 430 VAINQKGLNKVPGCSWVKVND 450
++ + + KVPGCS +++++
Sbjct: 470 EMMDCRRVRKVPGCSSIEIDN 490
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P + ++N LI Y + I +F EM G +P T V+ AC
Sbjct: 197 RQVFDEIP-DRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAH 255
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G + I L + ++G L+ MYA C +D A+ +F+ M V++V +W+ +
Sbjct: 256 LGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVL 315
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNG 232
I+G+ AL+ F RM + P+ VT + ++ AC V G + S G
Sbjct: 316 ISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFG 375
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR--GNYAISL 290
L + +V++ + G +++A ++ M ++Q I+ L R GN +
Sbjct: 376 LRPRIEHYGCMVDLLGRAGFLDEAQQLIQAM---SMQPDPIIWRELLGACRIHGNIQLGE 432
Query: 291 FAKMIQTGLKPDS 303
FA L+P++
Sbjct: 433 FAIKKLLELEPNN 445
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 282/517 (54%), Gaps = 71/517 (13%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-----FTRSLFNNL 60
I + +++ ++ LHQ H LK+ L H+T SR I S+S + H + S+F+ +
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLI-ASVSTNSHAQAIPYAHSIFSRI 68
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P P + +NT+IRAYA + ++ +F +ML + PD +T+ F +K+CG + G
Sbjct: 69 P-NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 121 GSVHSLIFKVG-------------------------------LDSDKYIGNTLLRMYA-- 147
+H + K G L+ D N LL YA
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 148 -----ACKEIDV------------------------AKAVFEEMPVRDVVSWSSMIAGFV 178
AC D A+ VF E PV++VVSW++MI G+
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
S+ L +F M+ A P++ TLVS++SAC + + GE +H+Y NG+ +D
Sbjct: 248 HAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGF 307
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ TALV+MYSKCG +EKA +VFN K++ +W +ISGL+ +G G +A+ +F++M+ G
Sbjct: 308 VATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEG 367
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
KP+ ++F +LSACS GL+DEG+ F+ M V+ I+PT+EHYGCMVD+LGR GL+EEA
Sbjct: 368 FKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEA 427
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+++ MP + +V+ S LGACRNHG V L + + + LL+L P+ +++V +++ +
Sbjct: 428 EELVQKMPQKEASVVWESLLGACRNHGNV-ELAERVAQKLLELSPQESSSFVQLSNMYAS 486
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
G W E+ + +G+ K PGCS ++V DG+ E
Sbjct: 487 MGRWKDVMEVRQKMRAQGVRKDPGCSMIEV-DGTVYE 522
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/437 (36%), Positives = 265/437 (60%), Gaps = 4/437 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++HTL +K D + + + + L + L +F+++P + ++ +I Y
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIP-DKNVVSWTAIISGYIGV 191
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+I +F +L+ L PD+FT V+ AC + + G +H I ++G+ + ++G
Sbjct: 192 GKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVG 251
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+L+ MYA C ++ A++VF+ MP +D+VSW +MI G+ P +A+ +F +M+ N
Sbjct: 252 TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T+V ++SAC L + GE + N + LGTAL+++Y+KCG + +A++V
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEV 371
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M+EK+ W +ISGLA NG + LF ++ + G+KPD +F +L C+H GLV
Sbjct: 372 FKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLV 431
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG+ YF+ M R +++ P++EHYGCMVD+LGRAGL++EA+ +IRNMP E NA++ + LG
Sbjct: 432 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H + L K L++LEP NYVL +++ S + WD AA++ +++N+K + K
Sbjct: 492 ACRIHRDTQLAELAL-KQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQK 550
Query: 440 VPGCSWVKVNDGSAEEM 456
PGCSW++V DG E
Sbjct: 551 PPGCSWIEV-DGIVHEF 566
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 213/364 (58%), Gaps = 10/364 (2%)
Query: 28 KTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESI 86
+ L H+ +++ + S S ++TR LF+ + P +F +NT+IR C ++I
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIK-QPNIFLWNTMIRGLVSNDCFDDAI 97
Query: 87 KLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMY 146
+ + M G P+NFT+PFV+KAC R L + +G +H+L+ K G D D ++ +L+ +Y
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 147 AACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
A C ++ A VF+++P ++VVSW+++I+G++ +A+ +F R+ N +P+S T+V
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV 217
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
++SACT L ++ +GE IH + G+ +V +GT+LV+MY+KCG++EKA VF+ M EK
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK 277
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK--- 323
++ SW MI G A NG AI LF +M + +KPD + +LSAC+ LG ++ G+
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVS 337
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
D +YN P + ++D+ + G + A+ + + M E + V+ + +
Sbjct: 338 GLVDRNEFLYN--PVLGT--ALIDLYAKCGSMSRAWEVFKGM-KEKDRVVWNAIISGLAM 392
Query: 384 HGQV 387
+G V
Sbjct: 393 NGYV 396
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 273/481 (56%), Gaps = 36/481 (7%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNN 59
+ + L++ + L Q+H LK N +S +++ I +L +TR +F++
Sbjct: 10 TEQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDS 69
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+ +P +NT++RAY+ ++ ++ L+ +ML + +++T+PF++KAC
Sbjct: 70 IS-SPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEE 128
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI--------------------------- 152
+H+ I K G + Y N+LLR+YA I
Sbjct: 129 TQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIK 188
Query: 153 ----DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
D+A +F+ MP ++V+SW++MI GFV +AL + +M +A P+S+TL
Sbjct: 189 FGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCS 248
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+SAC L + G+ IH+Y N +++D LG L +MY KCG +EKA VF+ + +K +
Sbjct: 249 LSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCV 308
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+WT +I GLA +G+G A+ F +M + G+ P+SI+F+AIL+ACSH GL +EGK+ F+
Sbjct: 309 CAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFES 368
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M+ VYNIKP+MEHYGCMVD++GRAGL++EA I +MP +PNA I + L AC+ H
Sbjct: 369 MSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKH-F 427
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L +GK+L++L+P+ Y+ AS+ + +G W+ + I +GL PGCS + +
Sbjct: 428 ELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITL 487
Query: 449 N 449
N
Sbjct: 488 N 488
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 274/480 (57%), Gaps = 37/480 (7%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLP 61
H+ L + T+ L ++H LKT L + +S F TS +++ +F +
Sbjct: 26 HLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIH 85
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIG 120
+P LF++NT+IR ++++S +I LF +ML + ++P TYP V KA + L G
Sbjct: 86 -SPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYG 144
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYA-------------------------------AC 149
+H + K+GL D +I NT++ MYA C
Sbjct: 145 AQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKC 204
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
E+D ++ +F+EMP+R+ VSW+SMI+G+V +AL +F +M+ P+ T+VSL+
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLL 264
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
+A L ++ GE IH Y N EL+V + ++++MY KCG + +AF+VF + K L
Sbjct: 265 NASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLS 324
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW MI GLA NG N AI LF+++ + L+PD ++F +L+AC++ GLVD+ K YF M
Sbjct: 325 SWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLM 384
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
++ Y I+P+++HY CMVD LGRAGL+EEA +IRNMP P+A+I S L ACR HG V
Sbjct: 385 SKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNV-E 443
Query: 390 LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L K ++ L+ YVL +++ + S ++ A E +++ +K + K PGCS ++VN
Sbjct: 444 LAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVN 503
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 251/398 (63%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +PV + ++N +I YA+T C E+++LF+EM+K +RPD TY V+ AC
Sbjct: 150 QKLFDEIPVKD-VVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS + G DS+ I N L+ +Y+ C E++ A +F+ + +DV+SW+++
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTL 268
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 269 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 328
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VFN M K+L SW MI G A +GR + + LF
Sbjct: 329 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLF 388
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G++ F M + Y + P +EHYGCM+D+LG
Sbjct: 389 SRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 448
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE ++Y+L
Sbjct: 449 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV-ELAESFAQNLIKIEPENPSSYIL 507
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A + +N K + KVPGCS ++V+
Sbjct: 508 LSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 183/350 (52%), Gaps = 37/350 (10%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + S+F + P +NT+IR +A +S + S+ L+ M+ GL P+++T+PF++K
Sbjct: 14 LPYATSVFETIQ-EPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLK 72
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM------------------------ 145
+C + G +H + K+G D D Y+ +L+ M
Sbjct: 73 SCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVS 132
Query: 146 -------YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
YA+ +I A+ +F+E+PV+DVVSW++MI+G+ +AL++F M N
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ T V+++SAC ++ G +HS+ +G + ++ + AL+++YSKCG VE A
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F + K++ SW +I G A+ LF +M+++G P+ ++ ++L AC+HLG
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 319 VDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+D G+ Y D+ R+ + ++DM + G IE A+ + +M
Sbjct: 313 IDIGRWIHVYIDK--RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 281/494 (56%), Gaps = 52/494 (10%)
Query: 8 TLIQLSK---TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
T +QL K ++ + Q+H + L NT ++ I + + +L F R +F+ P
Sbjct: 57 TFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSL 116
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP---DNFTYPFVVKACGR-CLLIGI 119
PP +N +I+AY+KT S ES+ LF +ML G RP D +T+ FV AC R L G
Sbjct: 117 PPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGY 175
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS------- 172
G +VH ++ K G +SD ++GN+L+ MY+ + AK VF+EMP RDV++W+S
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAM 235
Query: 173 ------------------------MIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVS 207
M+AG+V ++AL+ F+ M +E PN LVS
Sbjct: 236 RGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVS 295
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++SAC L + G+ IH Y N + L + TAL++MY+KCG ++ A +VF+ + +++
Sbjct: 296 ILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRD 355
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L +WT MISGL+ +G G + F++M+ G KPD I+ +L+ CSH GLV+EG + F
Sbjct: 356 LLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFH 415
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+M ++ I P +EHYGC++D+LGRAG +E A+ I++MP EP+ V R+ L ACR HG V
Sbjct: 416 DMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDV 475
Query: 388 LYLDDNLGKLLLKLEPEL-----GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+LG+ ++ EL G YVL +++ + G W++ ++ A++Q+G PG
Sbjct: 476 -----DLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPG 530
Query: 443 CSWVKVNDGSAEEM 456
CSW+++ DG E
Sbjct: 531 CSWIEI-DGVVHEF 543
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 277/478 (57%), Gaps = 46/478 (9%)
Query: 12 LSKTVHHLH--QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLF 67
LS HHLH Q+H L +LD + +S+FI TSL +S + S+F+N P L
Sbjct: 31 LSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLS-SYAFSIFSN-KTHPDLR 88
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
YNT I+A +KTS I +I L+ + GLRPD+++ P V+KA + + +G +H+
Sbjct: 89 LYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQT 148
Query: 128 FKVGLDSDKYIGNTLLRMYAACK-------------------------------EIDVAK 156
LD D + +L++MY++C E+ A+
Sbjct: 149 VSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSAR 208
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
VF EMP R+V+SW+++IAG+ + P +A+++F +M+L P+ + +++++SAC L
Sbjct: 209 KVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLG 268
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ GE IH+Y +GL V+L AL++MY+K G++ +A +VF M++K++ +W+ +I+
Sbjct: 269 ALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIA 328
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
LA +G G AI +F +M + ++P+ ++F AILSACSH+G+VD G+ YFD+M +Y I+
Sbjct: 329 ALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIE 388
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P +EHYGCM+D+L RAG ++EA ++ +MP E NA+I S L A H D L +
Sbjct: 389 PKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHR-----DAELAQ 443
Query: 397 L----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L L KLEP NYVL ++ + G W+ + + + G+ K PG S +++N+
Sbjct: 444 LALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINN 501
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 237/363 (65%), Gaps = 5/363 (1%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ P+ FTYPFV+KAC + +G SVH + K G + + NTL+ MY C+
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 152 ----IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
I+ A+ VF+EM D VSWS+MI G+V SDA+ +F M++ P+ +T+VS
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++SACT L + G+ + SY ++ +V L AL++M++KCG V+KA +F MRE+N
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ SWT +I GLA +GRG A+++F +M+++G+ PD + F +LSACSH GLVD+GK YFD
Sbjct: 181 IVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD 240
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M + ++I P +EHYGCMVDML RAGL++EA ++ MP +PN V+ R+ + ACR HG+
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE- 299
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L L + + + L++ EP +NYVL +++ + +W+ + A++ KG+ K+PG + ++
Sbjct: 300 LKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIE 359
Query: 448 VND 450
+++
Sbjct: 360 LDN 362
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 11/239 (4%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ F R +F+ + + + +++ +I Y + S ++I LF EM G+ PD T V+
Sbjct: 65 IEFARKVFDEMYKSDSV-SWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLS 123
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + +G V S + K + + + N L+ M+A C ++D A +F M R++VS
Sbjct: 124 ACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVS 183
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI----- 224
W+S+I G +A+ VF M + +P+ V + L+SAC+ V G+
Sbjct: 184 WTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMR 243
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNG 282
+++V +E G +V+M + G V++A K M + N W +I+ +G
Sbjct: 244 KDFSIVPKIE---HYG-CMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 281/450 (62%), Gaps = 10/450 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTL 72
++++++LH +K+S ++ + +L+ ++ SL + R +F+ +P +P AYNT+
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIP-SPDTIAYNTI 59
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR++++ S S+ F M G+ DNFT+PFV+KAC R + I +HSLI K GL
Sbjct: 60 IRSHSRFFPS-HSLSYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGL 115
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
SD ++ N L+ +Y C +++A VF+EM RD VSWS++IA F+ S+AL +F +
Sbjct: 116 GSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEK 175
Query: 193 MKLANES-PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+L ++ P+ VT++S++SA + L ++ G + ++ G + VALGTAL++M+S+CG
Sbjct: 176 MQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCG 235
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++++ VF M +N+ +WT +I+GL +GR A+++F M ++G++PD ++FS +L
Sbjct: 236 SIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLV 295
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH GLV EG + F+ + +VY + P ++HYGCMVD+LGRAGL+ EAY + MP +PN+
Sbjct: 296 ACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNS 355
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+I R+ LGAC NH L L + + + K+ + VL ++V +G W A +
Sbjct: 356 IIWRTLLGACVNHNN-LGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSK 414
Query: 432 INQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ +K + K PGCS + V+ E +S + +
Sbjct: 415 MREKRIGKEPGCSSINVDQTIHEFVSGDNS 444
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 271/489 (55%), Gaps = 55/489 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
KT L QLH +F+KT + + I S + + R++F +P P F +NT
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMP-EPNCFCWNT 88
Query: 72 LIRAYAKTS---CSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++R A+T+ E++ LF ML G ++P+ FT+P V+KAC R + G +H LI
Sbjct: 89 ILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLI 148
Query: 128 FKVGLDSDKYIGNTLLRMYAACK------------------------------------- 150
K G D+++ + L+RMY C
Sbjct: 149 VKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWN 208
Query: 151 ----------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+I AK +F+EMP R VVSW+ MI+G+ +A+ +F M+ +N P
Sbjct: 209 IMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDP 268
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N VTLVS++ A + + G+ IH YA N +E+D LG+ALV+MYSKCG ++KA +VF
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVF 328
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ ++N +W+ +I A +GR AI F M + G+ P+ +++ ILSACSH GLV+
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+++F M +V ++P +EHYGCMVD+LGRAG +EEA +IRNMP EP+ VI ++ LGA
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGA 448
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C+ H L + + + + L++L P +YV +++ + GNW+ A + + + + K
Sbjct: 449 CKMHKN-LKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKD 507
Query: 441 PGCSWVKVN 449
PGCSW++++
Sbjct: 508 PGCSWIEIH 516
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 269/452 (59%), Gaps = 15/452 (3%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTP 64
+L++L ++ HL+Q+H+ + L +T ++++ I +SLS S L + +S+ ++ V P
Sbjct: 669 SLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDH-SVHP 727
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+N LIR YA ++ +++ ++ M G+RP++ T+PF++KAC C G VH
Sbjct: 728 VPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVH 787
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K GLD D Y+ N L+ Y +CK+I A VF+EMP R VVSW+++I V
Sbjct: 788 VEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLKLG 847
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A++ F +M+ P+ T+V ++ C + N+ G IHS + GL L+ LGTALV
Sbjct: 848 EAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALV 907
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KPDS 303
+MY+K G V A VF+ M+EKN+ +W+ MI GLA +G + LF M+++ L P+
Sbjct: 908 DMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNY 967
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F +L ACSH GLV +G YF EM Y IKP M HYG MVD+LGRAGL++EAY+ I
Sbjct: 968 VTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFIT 1027
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLG------KLLLKLEPELGANYVLAASVSS 417
MP +P+ ++ R+ L AC H + D+ G K LL+LEP N+V+ A++ +
Sbjct: 1028 KMPFQPDPIVWRTLLSACSIHD----VKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYA 1083
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+G W+ AA++ + GL K G S V+++
Sbjct: 1084 DAGMWEKAAKVRRVMRDGGLKKKAGESCVELS 1115
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 271/489 (55%), Gaps = 55/489 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
KT L QLH +F+KT + + I S + + R++F +P P F +NT
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMP-EPNCFCWNT 88
Query: 72 LIRAYAKTS---CSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++R A+T+ E++ LF ML G ++P+ FT+P V+KAC R + G +H LI
Sbjct: 89 ILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLI 148
Query: 128 FKVGLDSDKYIGNTLLRMYAACK------------------------------------- 150
K G D+++ + L+RMY C
Sbjct: 149 VKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWN 208
Query: 151 ----------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+I AK +F+EMP R VVSW+ MI+G+ +A+ +F M+ +N P
Sbjct: 209 IMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDP 268
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N VTLVS++ A + + G+ IH YA N +E+D LG+ALV+MYSKCG +++A +VF
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVF 328
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ ++N +W+ +I A +GR AI F M + G+ P+ +++ ILSACSH GLV+
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+++F M +V ++P +EHYGCMVD+LGRAG +EEA +IRNMP EP+ VI ++ LGA
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGA 448
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C+ H L + + + + L++L P +YV +++ + GNW+ A + + + + K
Sbjct: 449 CKMHKN-LKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKD 507
Query: 441 PGCSWVKVN 449
PGCSW++++
Sbjct: 508 PGCSWIEIH 516
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 260/443 (58%), Gaps = 3/443 (0%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+LI + L +F K+SL + +L L R LF +PV +
Sbjct: 172 SLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAV- 230
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I YA++ E++ F EM + + P+ T V+ AC + + +G V S I
Sbjct: 231 SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI 290
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
GL S+ + N L+ MY+ C ++D A+ +FE + +D++SW+ MI G+ +S +AL
Sbjct: 291 EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEAL 350
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-DVALGTALVEM 246
+F +M+ +N PN VT VS++ AC L + G+ IH+Y L L + +L T+L++M
Sbjct: 351 ALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDM 410
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG++E A +VF M+ K+L SW MISGLA +G N A+ LF +M G +PD I+F
Sbjct: 411 YAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITF 470
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GLV+ G+ F M Y+I P ++HYGCM+D+LGRAGL +EA +++NM
Sbjct: 471 VGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME 530
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+P+ I S LGACR HG V L + K L +LEPE YVL +++ + +G WD A
Sbjct: 531 MKPDGAIWGSLLGACRVHGNV-ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVA 589
Query: 427 ELMVAINQKGLNKVPGCSWVKVN 449
+ +N KG+ KVPGCS ++V+
Sbjct: 590 RIRTKLNDKGMKKVPGCSSIEVD 612
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 209/393 (53%), Gaps = 37/393 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNNLPVT 63
TL+ K+ +L Q+H+ +KT L HNT ++ +IS L + LF ++
Sbjct: 37 TLLSTCKSFQNLKQIHSQIIKTGL-HNTQFALSKLIEFCAISPFGNLSYALLLFESIE-Q 94
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +NT+IR + +S + +I + ML G+ P+++T+PF++K+C + G +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------I 152
H + K+GL+SD ++ +L+ MYA E +
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
D A+ +FEE+PVRD VSW++MIAG+ +AL F MK AN +PN T+V+++SAC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++ G + S+ +GL ++ L AL++MYSKCG ++KA +F + EK++ SW
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+MI G + A++LF KM Q+ ++P+ ++F +IL AC++LG +D GK + +
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ + ++DM + G IE A + M
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 260/444 (58%), Gaps = 9/444 (2%)
Query: 21 QLHTLFLKT----SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH LK+ N + F S + L + + N+L F +NT+IRAY
Sbjct: 11 QLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFF-HNTMIRAY 69
Query: 77 AKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
++T +++ LF ML T RPD FTYPF++K+C R +G +H LI+K GL+S
Sbjct: 70 SQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLES 129
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D+Y+ N L+ MY++C + A VF +M RDVVSW+SMI GFV D +A+++F M
Sbjct: 130 DRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMV 189
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
PN T+VS++ AC V G + + L+ + TAL++MY+KCG +
Sbjct: 190 EDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIG 249
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A KVF+ + K++ +WT MISGLA++G A++LF +M GL+PD + +A+LSAC
Sbjct: 250 SARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACR 309
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
+ G EG YF+ M Y IKPT++HYGCMVD+L R G ++EA IR MP EP+ V+
Sbjct: 310 NAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLW 369
Query: 375 RSFLGACRNHGQVLYLDDNL-GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
R+ + A + HG + + + + LLK++ + +YVL +V + +G W A++ +N
Sbjct: 370 RTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMN 429
Query: 434 QKGLNKVPGCSWVKVNDGSAEEMS 457
QKGL+K PGCS ++V DG E +
Sbjct: 430 QKGLSKPPGCSRIEV-DGLVHEFA 452
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 278/490 (56%), Gaps = 47/490 (9%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPL 66
I KT HL Q+H F+KT H+ + +F+ S + + R F+ + P
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIH-HPNC 80
Query: 67 FAYNTLIRAYAKTSC-------SIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIG 118
F++NT+IRA A + S+E++ F ML GL P+ FT+P V+KAC + I
Sbjct: 81 FSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIE 140
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---------------------------- 150
G +H + K+GL SD+++ + L+R+Y C
Sbjct: 141 EGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGY 200
Query: 151 ----EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
++ ++ +F+ MP + VVSW+ MI+G +A+++FH M+L + PN VTLV
Sbjct: 201 VRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLV 260
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-E 265
S++ A + L + G+ +H +A N +E+D LG+AL++MYSKCG ++KA +VF +R +
Sbjct: 261 SVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK 320
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
KN +W+ +I GLA +GR A+ F +M Q G+ P + + +LSACSH GLV+EG++
Sbjct: 321 KNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSI 380
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ M + + P +EHYGCMVD+LGRAG +EEA +I NMP +P+ VIL++ LGAC+ HG
Sbjct: 381 YYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHG 440
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
+ + + + K+L+ P +YV +++ + GNW+ ++ + + + + K PGCSW
Sbjct: 441 NI-EMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSW 499
Query: 446 VKVNDGSAEE 455
+++ DG E
Sbjct: 500 IEL-DGVIHE 508
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 266/440 (60%), Gaps = 6/440 (1%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++ L Q+ +KT L ++ I+++ I + S+ + LF +P P + +N
Sbjct: 38 SLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIP-QPDIVLFN 96
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
++ R Y++++ +++I LF + L L PD++T+P ++KAC G +H L K+
Sbjct: 97 SMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKL 156
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL+ + Y+ TL+ MYA C ++D A+ VF+E+ VVS++++I G+ P++AL +F
Sbjct: 157 GLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLF 216
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+++ PN VT++S++S+C L + G+ IH Y NGL+ V + TAL++MY+KC
Sbjct: 217 RQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKC 276
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G ++ A VF M ++ Q+W+ MI A +G+G +S+F +M + ++PD I+F +L
Sbjct: 277 GSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLL 336
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
ACSH GLVDEG YF M+ VY I P ++HYGCMVD+LGRAGL+ EAY I +P +P
Sbjct: 337 YACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPT 396
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
++ R+ L +C +HG L L + +L+L+ G +YV+ +++ + +G W+ L
Sbjct: 397 PILWRTLLSSCSSHGN-LELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRK 455
Query: 431 AINQKGLNKVPGCSWVKVND 450
+ KG K+PGCS ++V++
Sbjct: 456 LMIHKGAVKIPGCSSIEVDN 475
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 270/473 (57%), Gaps = 42/473 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++++HL Q+H L T L +++ I+ RF S S L + + LF+ +P P F YN
Sbjct: 27 QSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMP-QPNTFFYN 85
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS------VH 124
T+IR YAK+S + LF++M + + PD FT+ F++KA R + S +H
Sbjct: 86 TIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIH 145
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEID 153
+FK G S ++ N L+ +YA E++
Sbjct: 146 GAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELE 205
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+A+ VF++MP +DVVSW++M++G+ + +AL++F M A P+ VT+VS++SACT
Sbjct: 206 LARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACT 265
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+L +V G ++HSY NG V+L AL+ MY+KCG V++A++VFN M+ K+L +W
Sbjct: 266 NLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNS 325
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
MIS A++G A LF+ M+ +G+ PD I+F A+L A +H GLVDEG F M R Y
Sbjct: 326 MISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDY 385
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
I+ ++EHYGC+VDMLGRAG +EEAY +I MP N ++ + L ACR +G V + +
Sbjct: 386 GIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDV-NMGER 444
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ K LL+L+P+ G Y+L + SG A + A+ + G K PG SWV
Sbjct: 445 VVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 276/477 (57%), Gaps = 34/477 (7%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVTPPLFAYNTLIRAY 76
HLHQ H L +LDH+ ++S FI +S S+ + SLF +L P +F YNT+IRA
Sbjct: 26 HLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIFLYNTIIRAL 85
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ + SI LF+ + LRPD++++PF +KA R G HS + GL S
Sbjct: 86 SLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIRFGLHSHL 145
Query: 137 YIGNTLLRMYAACKEIDV--------------------------------AKAVFEEMPV 164
++ +L+RMY++ D A+ +F+ MP
Sbjct: 146 HVLVSLIRMYSSSHISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQ 205
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
R+++SW+++I+G+ + P A+ +F M+L N P+ +TL++++SAC L + GE I
Sbjct: 206 RNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWI 265
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+Y ++GL +V L AL++MY+K G++++A +F M+ K + +WT MI+GLA +G G
Sbjct: 266 RNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLG 325
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ +F++M + +KP+ I+F A+LSACSH+GLV +++F M Y I+P +EHYGC
Sbjct: 326 TQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGC 385
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
M+D+LGRAG ++EA +++ MP EPNA I S L A HG + L + K L++LEP
Sbjct: 386 MIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAM-LGERTLKHLIELEPN 444
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
NY L +++ + G W + + + +G+ K+PG S+++VN+ E ++ ET+
Sbjct: 445 NSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRVNEFIAGETS 501
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 247/402 (61%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R LFN + V + ++ +I AK+ E++ +F +M + GL+P+ TY ++
Sbjct: 496 SIKDARLLFNKM-VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSIL 554
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +H + + GL +D ++ NTL+ MY+ C + A+ VF+ M RD+V
Sbjct: 555 NACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIV 614
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
++++MI G+ A + +ALK+F R++ P+ VT +++++AC + ++ + IHS
Sbjct: 615 AYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLV 674
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +G D +LG ALV Y+KCG A VF+ M ++N+ SW +I G A +GRG +
Sbjct: 675 LKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVL 734
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M G+KPD ++F ++LSACSH GL++EG+ YF M+R + I PT+EHYGCMVD+
Sbjct: 735 QLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDL 794
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG ++E +I+ MP + N I + LGACR HG V + + + LKL+P+ A
Sbjct: 795 LGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVP-VAERAAESSLKLDPDNAAV 853
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YV + + + +G WD+AA+L + Q+G+ K PG SW++V D
Sbjct: 854 YVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGD 895
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 189/353 (53%), Gaps = 11/353 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+H R +F+ + T + ++ +I YA S + ++F +M + G+ P+ TY V+
Sbjct: 294 SIHEAREVFDKME-TKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVL 352
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
A + G +VHS I G +SD +G L++MYA C + VFE++ RD++
Sbjct: 353 NAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI 412
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W++MI G + +A +++H+M+ PN +T V L++AC + + G IHS
Sbjct: 413 AWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRV 472
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V +G D+++ AL+ MY++CG ++ A +FN M K++ SWT MI GLA +G G A+
Sbjct: 473 VKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEAL 532
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
++F M Q GLKP+ +++++IL+ACS +D G+ ++ + +V+M
Sbjct: 533 AVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNM 591
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
G +++A + M T+ + V + +G Y NLGK LKL
Sbjct: 592 YSMCGSVKDARQVFDRM-TQRDIVAYNAMIGG--------YAAHNLGKEALKL 635
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 44/372 (11%)
Query: 49 SLHFTRSLFNNLPVTP-PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFV 107
S+ R ++N L T + ++N ++ Y + E++KL EM + GL T +
Sbjct: 191 SIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRL 250
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
+ +C + G +H K L D + N +L MYA C I A+ VF++M + V
Sbjct: 251 LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSV 310
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+ +I G+ C A ++F +M+ PN +T +++++A + ++ G+++HS+
Sbjct: 311 VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSH 370
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ G E D+A+GTALV+MY+KCG + +VF + ++L +W MI GLA+ G A
Sbjct: 371 ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEA 430
Query: 288 ISLFAKMIQTGLKPDSISFSAILSAC---------------------------------- 313
++ +M + G+ P+ I++ +L+AC
Sbjct: 431 SEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISM 490
Query: 314 -SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT---EP 369
+ G + + + F++M R I T M+ L ++GL EA + ++M +P
Sbjct: 491 YARCGSIKDARLLFNKMVRKDIISWT-----AMIGGLAKSGLGAEALAVFQDMQQAGLKP 545
Query: 370 NAVILRSFLGAC 381
N V S L AC
Sbjct: 546 NRVTYTSILNAC 557
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 35/327 (10%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
+ + G R ++ Y ++K C + G VH I + D+Y N L+ MY C
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 152 IDVAKAVFEEM--PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
I+ A+ V+ ++ R V SW++M+ G+V +ALK+ M+ + T + L+
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S+C S + G IH A+ L DV + ++ MY+KCG + +A +VF+ M K++
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY---- 325
SWTI+I G AD G A +F KM Q G+ P+ I++ +L+A S + GK
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 326 ------------------------FDEMARVYN--IKPTMEHYGCMVDMLGRAGLIEEAY 359
+ + +V+ + + + M+ L G EEA
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 360 HIIRNMPTE---PNAVILRSFLGACRN 383
I M E PN + L AC N
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVN 458
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ V ++ NS + ++ C + ++ AG +H + + + LD AL+
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 246 MYSKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
MY +CG +E+A +V+N + E+ + SW M+ G G A+ L +M Q GL
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMAR---VYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
+ +LS+C ++ G+ E + ++++ C+++M + G I EA
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVA----NCILNMYAKCGSIHEARE 300
Query: 361 IIRNMPTE 368
+ M T+
Sbjct: 301 VFDKMETK 308
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 236/391 (60%), Gaps = 2/391 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I AY K +E +++F ML+ G+ D T VV ACGR +G V +
Sbjct: 188 WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVD 247
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ GL ++ + L+ MYA C E+ A+ +F+ M RDVV+WS+MI+G+ D +AL
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+LA PN VT+VS++SAC L + G+ +HSY L L + LGTALV+ Y+
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ A + F M KN +WT +I G+A NGRG A+ LF+ M + ++P ++F
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH LV+EG+ +FD M + Y IKP EHYGC+VD+LGRAGLI+EAY IR MP E
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
PNAVI R+ L +C H V ++ L K ++ L P +Y+L +++ + G W AA +
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEAL-KQIVSLNPSHSGDYILLSNIYASVGQWKNAAMI 546
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+ +G+ K PGCS +++ DG E E
Sbjct: 547 RKEMKDRGIEKTPGCSLIEL-DGVVVEFFAE 576
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 17 HHLHQLHTLFLKTS--LDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFA--YNT 71
+L QLH +K+ C S + S +L + SLF P PPL YN
Sbjct: 30 RYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGP-RPPLSTPCYNV 88
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+RA +++ LF EML + PD T +K+C R + +G + + K
Sbjct: 89 LMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKR 148
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL +D+++ ++L+ MYA+C+++ A+ +F+ + VV W+++I ++ + + +++F
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M + + +TLVS+V+AC + + + G+ + Y GL + L TAL++MY+KC
Sbjct: 209 KGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC 268
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + KA ++F+ M+ +++ +W+ MISG + A++LF++M ++P+ ++ ++L
Sbjct: 269 GELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVL 328
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
SAC+ LG ++ GK + R + T+ +VD + G I++A +MP +
Sbjct: 329 SACAVLGALETGK-WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + + + A++ +I Y + E++ LF EM + P++ T V+ AC
Sbjct: 275 RRLFDGMQ-SRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAV 333
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VHS I + L +G L+ YA C ID A FE MPV++ +W+++
Sbjct: 334 LGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 393
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNG 232
I G +AL++F M+ A+ P VT + ++ AC+ V G S G
Sbjct: 394 IKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYG 453
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLA 279
++ +V++ + G +++A++ M E N W ++S A
Sbjct: 454 IKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCA 501
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 249/398 (62%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +PV + ++N +I YA+T E+++LF +M+KT +RPD T VV AC +
Sbjct: 177 QKMFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ +Y+ C E++ A +FE +P +DV+SW+++
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTL 295
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 296 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 355
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VFN + K+L SW MI G A +GR + + +F
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G++ F M + Y + P +EHYGCM+D+LG
Sbjct: 416 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 475
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE +YVL
Sbjct: 476 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV-ELGESFAQNLIKIEPENPGSYVL 534
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A +N KG+ KVPGCS ++++
Sbjct: 535 LSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEID 572
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 201/390 (51%), Gaps = 41/390 (10%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAY 69
+ + L +H +KT L + +S+ I L+ L + S+F + P L +
Sbjct: 1 QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQ-EPNLLIW 59
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT+ R +A +S + ++KL+ M+ GL P+++T+PF++K+C + G +H + K
Sbjct: 60 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK 119
Query: 130 VGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAV 158
+G D D Y+ +L+ MY A+ I+ A+ +
Sbjct: 120 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKM 179
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+E+PV+DVVSW++MI+G+ + +AL++F M N P+ T+V++VSAC ++
Sbjct: 180 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 239
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G +HS+ +G ++ + AL+++YSKCG +E A +F + K++ SW +I G
Sbjct: 240 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNI 335
A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y D+ R+ +
Sbjct: 300 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RLKGV 357
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G IE A+ + ++
Sbjct: 358 ANASSLRTSLIDMYAKCGDIEAAHQVFNSI 387
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 267/447 (59%), Gaps = 16/447 (3%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL----PVTPPLFAYNTLIR 74
L ++H +K SL ++ ++++ + + H+ + + NL P F YN +IR
Sbjct: 75 LKKIHAHIVKFSLSQSSFLVTKMV----DVCNHYGETEYANLLFKGVADPNAFLYNAMIR 130
Query: 75 AYAKTSCSIESIKLFDEML-----KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
AY + +I ++ +ML + + PD FT+PFVVK+C + +G VH +FK
Sbjct: 131 AYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFK 190
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGFVACDSPSDAL 187
G S+ + N+L+ MY C +D A VFEEM RD + SW+++++G+ +DAL
Sbjct: 191 FGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADAL 250
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ F RM++ P+ ++LVS++ C L + G+ IH YA G ++ + AL+EMY
Sbjct: 251 EFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMY 310
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG +++ ++F+ M+E+++ SW+ MI GLA++GR AI LF +M + ++P I+F
Sbjct: 311 AKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFV 370
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L+AC+H GL++EG YF+ M R YNI+P +EHYGC+V++LG +G +++A +++ MP
Sbjct: 371 GLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPR 430
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P++ I S L +CR+HG L + + LL+LEP NYVL +++ + G WD +
Sbjct: 431 KPDSPIWGSLLSSCRSHGN-LKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSR 489
Query: 428 LMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ + K + K PGCS ++V++ E
Sbjct: 490 MRKLMRSKSMKKTPGCSSIEVDNMVQE 516
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 263/447 (58%), Gaps = 6/447 (1%)
Query: 8 TLIQL-SKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVT 63
+L+Q + + H L Q+H ++ + N + + F + SLS + + ++F +
Sbjct: 22 SLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIH-N 80
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P +F +NT+IR YA++ + + +M+ + + PD TYPF++KA + L + G ++
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS+ + G +S ++ N+LL +YAAC + + A VFE M RD+V+W+SMI GF P
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++AL +F M + P+ T+VSL+SA L + G +H Y + GL + + +L
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+++Y+KCG + +A +VF+ M E+N SWT +I GLA NG G A+ LF +M GL P
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSE 320
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
I+F +L ACSH G++DEG YF M I P +EHYGCMVD+L RAGL+++AY I+
Sbjct: 321 ITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQ 380
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
NMP +PNAVI R+ LGAC HG L L + LL LEP+ +YVL +++ + W
Sbjct: 381 NMPVQPNAVIWRTLLGACTIHGH-LGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWS 439
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
+ ++ + G+ K PG S V++ +
Sbjct: 440 DVQVIRRSMLKDGVKKTPGYSLVELGN 466
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 277/481 (57%), Gaps = 38/481 (7%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRF----ILTSLSISLHFTRSLFNNLPVTPP 65
+Q L Q+H LKT L ++ I++F I ++ S L + + +F+ P
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD-RPD 79
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +N +IR ++ + S+ L+ ML + + +T+P ++KAC +H+
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM------------ 173
I K+G ++D Y N+L+ YA +A +F+ +P D VSW+S+
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 174 -------------------IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
I+G+V D +AL++FH M+ ++ P++V+L + +SAC
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ IHSY + +D LG L++MY+KCG +E+A +VF +++K++Q+WT +
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A +G G AIS F +M + G+KP+ I+F+A+L+ACS+ GLV+EGK F M R YN
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
+KPT+EHYGC+VD+LGRAGL++EA I+ MP +PNAVI + L ACR H + L + +
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI-ELGEEI 438
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
G++L+ ++P G YV A++ ++ WD AAE + ++G+ KVPGCS + + +G+
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL-EGTTH 497
Query: 455 E 455
E
Sbjct: 498 E 498
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 263/457 (57%), Gaps = 11/457 (2%)
Query: 1 MISRHIETLIQLSKTVH-HLHQLHTLFLKTSL-----DHNTCIISRFILTSLSISLHFTR 54
I R +L+QL + L Q+H ++ + D N +I F L SLS + F
Sbjct: 32 FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLI--FALVSLSAPMSFAA 89
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGR 113
+FN + P +F +NT+IR +A++ +++LF +M + + PD T+PF+ KA +
Sbjct: 90 QIFNQIQ-APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAK 148
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + +G +HS++ + G DS +++ N+L+ MY+ + A VFE M RD V+W+S+
Sbjct: 149 LMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSV 208
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I GF P++AL ++ M P+ T+VSL+SAC L + GE +H Y V GL
Sbjct: 209 INGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGL 268
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ AL+++YSKCG+ A KVF+ M E+++ SWT +I GLA NG GN A+ LF +
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGE 328
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + GLKP I+F +L ACSH G++DEG NYF M Y I P +EH+GCMVD+L RAG
Sbjct: 329 LERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAG 388
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ +AY IRNMP PNAVI R+ LGAC HG L L + + +LE ++VL +
Sbjct: 389 KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH-LELGEVARAEIQRLEQRHSGDFVLLS 447
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + W + + KG+ K PG S V++ +
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKN 484
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 248/398 (62%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +PV + ++N LI YA+T E+++LF EM+KT ++PD T V+ AC +
Sbjct: 189 QKMFDEIPVKD-VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ +Y C E++ A +FE + +DV+SW+++
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTL 307
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 367
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VF+ M ++L SW MI G A +GR N A +F
Sbjct: 368 GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIF 427
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G++ F M Y I P +EHYGCM+D+LG
Sbjct: 428 SRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGH 487
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I +M +P+ VI S L AC+ HG V L ++ + L+K+EP+ +YVL
Sbjct: 488 SGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNV-ELGESFAQNLIKIEPKNSGSYVL 546
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A+ +N KG+ KVPGCS ++++
Sbjct: 547 LSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEID 584
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 205/397 (51%), Gaps = 43/397 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPV 62
+L+ KT+ L +H +KT L + +S+ I S+ +S HF S+F+++
Sbjct: 7 SLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSV-LSPHFDGLTYAISVFDSIQ- 64
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P L +NT+ R +A +S + ++ L+ M+ GL P+++T+PF++KAC + G
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKE 151
+H + K+G D D Y+ +L+ MY A+
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I A+ +F+E+PV+DVVSW+++I+G+ + +AL++F M N P+ T+V+++SA
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C ++ G +HS+ +G ++ + AL+++Y KCG VE A +F + K++ SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDE 328
+I G A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y D+
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + ++DM + G IE A + +M
Sbjct: 365 --RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 259/439 (58%), Gaps = 4/439 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
+K + H LH ++ S D+ + + + + + L + R +F+ + V + +++
Sbjct: 223 AKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV-SWSA 281
Query: 72 LIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + C E+++LFD+M LK + P T V++AC + + G +H I K+
Sbjct: 282 MIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D +GNTLL MYA C ID A F+EM +D VS+S++++G V + + AL +F
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+L+ P+ T++ ++ AC+ L ++ G H Y +V G D + AL++MYSKC
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + A +VFN M ++ SW MI G +G G A+ LF ++ GLKPD I+F +L
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S+CSH GLV EG+ +FD M+R ++I P MEH CMVD+LGRAGLI+EA+H IRNMP EP+
Sbjct: 522 SSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
I + L ACR H + L + + K + L PE N+VL +++ S +G WD AA + +
Sbjct: 582 VRIWSALLSACRIHKNI-ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRI 640
Query: 431 AINQKGLNKVPGCSWVKVN 449
GL K+PGCSW+++N
Sbjct: 641 TQKDWGLKKIPGCSWIEIN 659
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 204/390 (52%), Gaps = 22/390 (5%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH---FTRSLFNNLPV 62
+E IQ SK++ ++H FLK + + ++ ++ + LT L +S + R LF+ +P
Sbjct: 15 LEACIQ-SKSLTEAKKIHQHFLKNTSNADSSVLHK--LTRLYLSCNQVVLARRLFDEIP- 70
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P + +N +IRAYA +I L+ ML G+RP+ +TYPFV+KAC L I G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG---FVA 179
+HS GL+SD ++ L+ YA C + A+ +F M RDVV+W++MIAG +
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
CD DA+++ +M+ PNS T+V ++ + G+++H Y V + V +
Sbjct: 191 CD---DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTG 298
GT L++MY+KC + A K+F++M +N SW+ MI G + A+ LF +MI +
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDA 307
Query: 299 LKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ P ++ ++L AC+ L + G+ Y ++ V +I ++ M + G+I
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG----NTLLSMYAKCGVI 363
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++A M ++V + + C +G
Sbjct: 364 DDAIRFFDEM-NPKDSVSFSAIVSGCVQNG 392
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
Y +++AC + + +H K ++D + + L R+Y +C ++ +A+ +F+E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 163 PVRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
P V+ W+ +I + A + P D A+ ++H M PN T ++ AC+ L+ + G
Sbjct: 70 PNPSVILWNQIIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
IHS+A + GLE DV + TALV+ Y+KCG + +A ++F+ M +++ +W MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
G + A+ L +M + G+ P+S + +L + GK
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 263/457 (57%), Gaps = 11/457 (2%)
Query: 1 MISRHIETLIQLSKTVH-HLHQLHTLFLKTSL-----DHNTCIISRFILTSLSISLHFTR 54
I R +L+QL + L Q+H ++ + D N +I F L SLS + F
Sbjct: 32 FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLI--FALVSLSAPMSFAA 89
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGR 113
+FN + P +F +NT+IR +A++ +++LF +M + + PD T+PF+ KA +
Sbjct: 90 QIFNQIQ-APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAK 148
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + +G +HS++ + G DS +++ N+L+ MY+ + A VFE M RD V+W+S+
Sbjct: 149 LMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSV 208
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I GF P++AL ++ M P+ T+VSL+SAC L + GE +H Y V GL
Sbjct: 209 INGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGL 268
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ AL+++YSKCG+ A KVF+ M E+++ SWT +I GLA NG GN A+ LF +
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGE 328
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + GLKP I+F +L ACSH G++DEG NYF M Y I P +EH+GCMVD+L RAG
Sbjct: 329 LERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAG 388
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ +AY IRNMP PNAVI R+ LGAC HG L L + + +LE ++VL +
Sbjct: 389 KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH-LELGEVARAEIQRLEQRHSGDFVLLS 447
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + W + + KG+ K PG S V++ +
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKN 484
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 245/398 (61%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +PV + ++N +I YA T + E++ LF EM+KT ++PD T VV AC +
Sbjct: 189 QKMFDEIPVKD-VVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ 247
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I GL S+ I N L+ +Y+ C E++ A +F+ + +DV+SW++M
Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTM 307
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 308 IGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIK 367
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VFN M + L + MI G A +GR N A +F
Sbjct: 368 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIF 427
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G+ F M + Y I P +EHYGCM+D+LG
Sbjct: 428 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGH 487
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE +YVL
Sbjct: 488 LGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNV-ELGESFAQKLIKIEPENPGSYVL 546
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A + +N KG+ KVPGCS ++++
Sbjct: 547 LSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEID 584
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 206/396 (52%), Gaps = 41/396 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRF----ILTSLSISLHFTRSLFNNLPVT 63
+L+ KT+ L +H +KT L + +SR IL+ L + S+F +
Sbjct: 7 SLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ-E 65
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P L +NT+ R +A +S + +IKL+ M+ GL P+++T+PF++K+C + + G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 124 HSLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKEI 152
H + K+G + D Y+ +L+ MY A+ I
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+ A+ +F+E+PV+DVVSW+++I+G+ + +AL +F M N P+ T+V++VSAC
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
+++ G +HS+ +GL ++ + AL+++YSKCG VE A +F + K++ SW
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEM 329
MI G A+ LF +M+++G P+ ++ +IL AC+ LG +D G+ Y D+
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK- 364
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + ++DM + G IE A+ + +M
Sbjct: 365 -RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 260/446 (58%), Gaps = 5/446 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTP 64
+L++ + +HL ++H L + L +++ + R S S +L + SL +
Sbjct: 35 SLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHS 94
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+N +IR Y+ + E+I LF EM + G+RP+N T+PF++KAC + G H
Sbjct: 95 ATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFH 154
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
++ K GLD D Y+ NTL+ Y +CK + A+ VF+EM R +VSW+++I V
Sbjct: 155 AIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFD 214
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ F +M P+ T+V ++SAC L N+ G +HS V G+ L+V LGTA V
Sbjct: 215 EAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFV 274
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+K G V A VFN +++K++ +W+ MI GLA +G N AI LF M + + P+ +
Sbjct: 275 DMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELFTNMTSSPIVPNHV 334
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L ACSH GLVD+ +YF+ M RVY IKP M HYG MVD+LGRAG ++EAY +I +
Sbjct: 335 TFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMS 394
Query: 365 MPTEPNAVILRSFLGAC--RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
MP EP+ ++ R+ L AC R+ + + K LL+LEP+ G N V+ A+ + G W
Sbjct: 395 MPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRGGNVVMVANKFAELGMW 454
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKV 448
AA+ + +G+ K+ G S +++
Sbjct: 455 KQAADYRRTMKDRGIKKMAGESCIEL 480
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 266/462 (57%), Gaps = 34/462 (7%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L QLH LKT+ ++ +SR + + + S + + +F L + + +NT +R++A
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASE-VTHWNTCLRSFA 89
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ ++I LF + + + PD++T FV+KAC R L + G VH + K+GL S+ +
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMF 149
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----------------------------- 168
+ N ++ +YA C EI VA+ VF++MP RDV+
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209
Query: 169 --SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
SW+SMI G+ C +A+ +F M+ A PN VT+V+++ AC + N+ G IH
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
++ +G E ++ + L++MY KCG +E A ++F+ M E+ + SW+ MI+GLA +GR
Sbjct: 270 FSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAED 329
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A++LF KMI TG+KP++++F IL ACSH+G+V++G+ YF M R Y I P +EHYGCMV
Sbjct: 330 ALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+ RAGL++EA+ I NMP PN V+ + LG C+ H + L + + L KL+P
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNI-KLAEEATRHLSKLDPLND 448
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
YV+ +++ + +G W+ A + + +G+ K PG S + V
Sbjct: 449 GYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMV 490
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 260/446 (58%), Gaps = 5/446 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTP 64
+L+ + +HL ++H L + L +++ + R S S +L + SL +
Sbjct: 35 SLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHS 94
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+N +IR Y+ + E+I LF EM + G+RP+N T+PF++KAC + G H
Sbjct: 95 ATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFH 154
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
++ K GLD D Y+ NTL+ Y +CK + A+ VF+EM R +VSW+++I V
Sbjct: 155 AIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFD 214
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ F +M P+ T+V ++SAC L N+ G +HS V G+ L+V LGTA V
Sbjct: 215 EAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFV 274
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+K G V A VFN +++K++ +W+ MI GLA +G N AI LF M+ + + P+ +
Sbjct: 275 DMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELFTNMMSSPIVPNHV 334
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L ACSH GLVD+ +YF+ M RVY IKP M HYG MVD+LGRAG ++EAY +I +
Sbjct: 335 TFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMS 394
Query: 365 MPTEPNAVILRSFLGAC--RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
MP EP+ ++ R+ L AC R+ + + K LL+LEP+ G N V+ A+ + G W
Sbjct: 395 MPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRGGNVVMVANKFAELGMW 454
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKV 448
AA+ + +G+ K+ G S +++
Sbjct: 455 KQAADYRRTMKDRGIKKMAGESCIEL 480
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/439 (37%), Positives = 258/439 (58%), Gaps = 4/439 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
+K + H LH ++ S D+ + + + + + L + R +F+ + V + +++
Sbjct: 223 AKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV-SWSA 281
Query: 72 LIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + C E+++LFD+M LK + P T V++AC + + G +H I K+
Sbjct: 282 MIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D +GNTLL MYA C ID A F+ M +D VS+S++++G V + + AL +F
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+L+ P+ T++ ++ AC+ L ++ G H Y +V G D + AL++MYSKC
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + A +VFN M ++ SW MI G +G G A+ LF ++ GLKPD I+F +L
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S+CSH GLV EG+ +FD M+R ++I P MEH CMVD+LGRAGLI+EA+H IRNMP EP+
Sbjct: 522 SSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
I + L ACR H + L + + K + L PE N+VL +++ S +G WD AA + +
Sbjct: 582 VRIWSALLSACRIHKNI-ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRI 640
Query: 431 AINQKGLNKVPGCSWVKVN 449
GL K+PGCSW+++N
Sbjct: 641 TQKDWGLKKIPGCSWIEIN 659
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 204/390 (52%), Gaps = 22/390 (5%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH---FTRSLFNNLPV 62
+E IQ SK++ ++H FLK + + ++ ++ + LT L +S + R LF+ +P
Sbjct: 15 LEACIQ-SKSLTEAKKIHQHFLKNTSNADSSVLHK--LTRLYLSCNQVVLARRLFDEIP- 70
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P + +N +IRAYA +I L+ ML G+RP+ +TYPFV+KAC L I G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG---FVA 179
+HS GL+SD ++ L+ YA C + A+ +F M RDVV+W++MIAG +
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
CD DA+++ +M+ PNS T+V ++ + G+++H Y V + V +
Sbjct: 191 CD---DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTG 298
GT L++MY+KC + A K+F++M +N SW+ MI G + A+ LF +MI +
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA 307
Query: 299 LKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ P ++ ++L AC+ L + G+ Y ++ V +I ++ M + G+I
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG----NTLLSMYAKCGVI 363
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++A M ++V + + C +G
Sbjct: 364 DDAIRFFDXM-NPKDSVSFSAIVSGCVQNG 392
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
Y +++AC + + +H K ++D + + L R+Y +C ++ +A+ +F+E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 163 PVRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
P V+ W+ +I + A + P D A+ ++H M PN T ++ AC+ L+ + G
Sbjct: 70 PNPSVILWNQIIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
IHS+A + GLE DV + TALV+ Y+KCG + +A ++F+ M +++ +W MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
G + A+ L +M + G+ P+S + +L + GK
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 268/444 (60%), Gaps = 6/444 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNT-CIISRFILTSLSI--SLHFTRSLFNNLPVTPP 65
L++ K++ Q+H LK L ++ C S +LS S+ + S+F L P
Sbjct: 38 LVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLD-EPT 96
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR Y +I L+++ML+ + PDNFTYP V+KAC R +I G +H
Sbjct: 97 TFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHG 156
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+FK+GL+ D Y+ N+L+ MY C++I+++ A+F M + V SWS++IA + +
Sbjct: 157 HVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWE 216
Query: 186 ALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
L +F M + LV+++SACT L G H + N EL+VA+ T+L+
Sbjct: 217 CLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLM 276
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY KCG ++K +F M KN S++++ISGL +G G A+ +F++M++ GL+PD +
Sbjct: 277 DMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDV 336
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
++ ++LSACSH GLVDEG + FD+M Y I+PTM+HYGCMVD+ GRAGL+EEA+ ++++
Sbjct: 337 TYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQS 396
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP + N V+ RS L AC+ H L L + + L +L ++Y++ +++ + + W+
Sbjct: 397 MPIKANDVLWRSLLSACKVHDN-LKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWEN 455
Query: 425 AAELMVAINQKGLNKVPGCSWVKV 448
AA++ + +GL + PG S V+V
Sbjct: 456 AAKIRTKMINRGLIQTPGYSLVEV 479
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 267/433 (61%), Gaps = 7/433 (1%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS---LHFTRSLFNNLPVTPPLFAYNTLIRA 75
L Q+H ++ + N ++ + I+ + +++ S+F + P F +NT+IR
Sbjct: 4 LKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIG-DPDAFIFNTMIRG 62
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+ K + ++ + M + GL D+FT+ F++K CG+ L+ +G +H K GL+S
Sbjct: 63 FGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLNSH 122
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ NTL+ MY K+I+ ++ +FEE+P ++V+W+ +I V+C ++AL++F RM
Sbjct: 123 VFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLK 182
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
P+ T V ++SAC++L + G +HS G + +L++MY+KCG +++
Sbjct: 183 FGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQE 242
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KPDSISFSAILSACS 314
AF++FN M +KN +W MI GLA +G N A++LF+ M++ L PD I+F +LSACS
Sbjct: 243 AFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACS 302
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H G+VD+G +FD M + Y+I+PT++HYGCMVD+LGRAG +EEAY +I NMP + NA++
Sbjct: 303 HGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVW 362
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
R+ L ACR HG V L + K LL+LEP+ ++YVL A+ + +G W+ A + +++
Sbjct: 363 RTLLAACRLHGNV-ELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHK 421
Query: 435 KGLNKV-PGCSWV 446
+G+ K PG S V
Sbjct: 422 RGVQKPEPGNSVV 434
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 258/430 (60%), Gaps = 3/430 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +++ ++ + +++ + + + +++ LF +P+ + ++N +I Y+
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRD-VASWNAIIGGYSLN 300
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S E++ F+ M G++P++ T V+ AC + G +H + G +S+ +G
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA C ++ A +FE MP ++VV+W+++I+G+ P +AL +F M+
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+S +VS++ AC + + G+ IH Y + +G E +V +GT LV++Y+KCG+V A K+
Sbjct: 421 PDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKL 480
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M E+++ SWT MI +G G A++LF+KM +TG K D I+F+AIL+ACSH GLV
Sbjct: 481 FERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLV 540
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
D+G YF M Y + P +EHY C+VD+LGRAG ++EA II+NM EP+A + + LG
Sbjct: 541 DQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLG 600
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H + L + K L +L+P+ YVL +++ + + W+ A+L + +KG+ K
Sbjct: 601 ACRIHCNI-ELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKK 659
Query: 440 VPGCSWVKVN 449
PGCS V V+
Sbjct: 660 QPGCSVVAVH 669
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 182/324 (56%), Gaps = 10/324 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R +F+ +P + ++N +I Y++ E++ LF EM G++P++ T V+
Sbjct: 170 SLENARQVFDRMP-KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVM 228
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
C L + G +H + G++SD + N L+ MYA C ++ A +FE MP+RDV
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVA 288
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+++I G+ +AL F+RM++ PNS+T+VS++ AC L + G+ IH YA
Sbjct: 289 SWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYA 348
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +G E + +G ALV MY+KCG+V A+K+F M +KN+ +W +ISG + +G + A+
Sbjct: 349 IRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEAL 408
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GC 344
+LF +M G+KPDS + ++L AC+H +++GK Y I+ E
Sbjct: 409 ALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHG-----YTIRSGFESNVVVGTG 463
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTE 368
+VD+ + G + A + MP +
Sbjct: 464 LVDIYAKCGNVNTAQKLFERMPEQ 487
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 184/349 (52%), Gaps = 10/349 (2%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
+ T+ +S ++ F + + I Y K ++++L+ +M +TG+ PD
Sbjct: 61 VKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDK 120
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
+ V+KACG + G VH I G +SD +G L MY C ++ A+ VF+
Sbjct: 121 LVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDR 180
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP RDVVSW+++IAG+ P +AL +F M++ PNS TLVS++ C L+ + G
Sbjct: 181 MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG 240
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH YA+ +G+E DV + LV MY+KCG+V A K+F M +++ SW +I G + N
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+ + A++ F +M G+KP+SI+ ++L AC+HL +++G+ Y I+ E
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG-----YAIRSGFES 355
Query: 342 Y----GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+V+M + G + AY + MP + N V + + HG
Sbjct: 356 NDVVGNALVNMYAKCGNVNSAYKLFERMPKK-NVVAWNAIISGYSQHGH 403
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 270/490 (55%), Gaps = 44/490 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----------LHFTRSLFN 58
L+Q + L +H L+T L + + SR + +L + L + +F+
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFS 77
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+ P LF +N LIR ++ + ++ + +MLK+ + PDN T+PF++KA +
Sbjct: 78 QIQ-NPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVV 136
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G HS I + G +D Y+ N+L+ MYA C I A +F +MP RDVVSW+SM+AG+
Sbjct: 137 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 196
Query: 179 ACDSPSDALKVF----HR---------------------------MKLANESPNSVTLVS 207
C DA ++F HR MK N +VS
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++S+C L + GE H Y V + + +++ LGTALV+MY +CG +EKA +VF + +K+
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
SW+ +I GLA +G + AI F++M++ G P I+ +A+LSACSH GLVD+G ++
Sbjct: 317 SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYE 376
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M R Y I+P +EHYGC+VDMLGRAG + EA + I MP +PNA IL + LGAC+ +
Sbjct: 377 NMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNT 436
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ + +G +L++++PE YVL +++ + +G W+ L + +K + K PG S ++
Sbjct: 437 -EVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIE 495
Query: 448 VNDGSAEEMS 457
+ DG + S
Sbjct: 496 I-DGKINKFS 504
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 260/486 (53%), Gaps = 47/486 (9%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-----LHFTRSLFNNLPVTPPLFAYNTL 72
HL +H ++T + + SR I + S + + +F+ + P LF +N +
Sbjct: 32 HLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ-NPNLFIFNAM 90
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR ++ + ++ + + + GL PDN T+PF+VK+C + I +G H I K G
Sbjct: 91 IRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGF 150
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ D Y+ N+L+ MYA + + A +F+ M DVVSW+SMI GF C A K+F +
Sbjct: 151 EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210
Query: 193 MKLAN-------------------------------ESPNSVTLVSLVSACTSLINVRAG 221
M N N +VS++S+C L + G
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELG 270
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
E H Y V NG+ L++ LGTALV+MY++CG ++KA VF + E++ SWT +I+GLA +
Sbjct: 271 ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMH 330
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G ++ FA M++ GL P I+F+A+LSACSH GLV+ G F+ M R + ++P +EH
Sbjct: 331 GYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEH 390
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCMVD+LGRAG +EEA + MP +PNA + + LGACR H + + +GK+L++L
Sbjct: 391 YGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA-EIGERVGKILIQL 449
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK---------VNDGS 452
P+ YVL +++ + + W+ E+ + KGL K PG S ++ + D S
Sbjct: 450 LPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSS 509
Query: 453 AEEMSK 458
EM K
Sbjct: 510 HPEMDK 515
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 263/440 (59%), Gaps = 10/440 (2%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-----TRSLFNNLPVTPPLFA 68
K + + QLH L S+ +N ++ +L + +H +LF+ +P P+ +
Sbjct: 1093 KNICQIKQLHALITTNSVLYNNLTVANKLLY---VYVHHKCLTDAYALFDEMPQKNPV-S 1148
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ +I + K ++ K F E+++ G++PDN+T PFV+KAC + + +G +H ++
Sbjct: 1149 WSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVL 1208
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K GL D ++ L+ MYA CK I+ AK +F+ MP +D+V+W+ MI G+ C + ++L
Sbjct: 1209 KYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLV 1268
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F ++ P+ + +VS+V+AC L + +H Y N LDV LGTA+++MY+
Sbjct: 1269 LFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYA 1328
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG V+ A ++F+ M KN+ SW+ MI+ +G+G A+ LF M+ +G+ P++I+F +
Sbjct: 1329 KCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVS 1388
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH GLV++G M + ++P ++H+ CMVD+LGRAG + EA+ I NM E
Sbjct: 1389 LLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVE 1448
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+ + S LGACR H ++ L + K LL+L+P+ NY+L +++ + +G W A++
Sbjct: 1449 KDEGLWSSLLGACRIHKRI-DLAEKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKI 1507
Query: 429 MVAINQKGLNKVPGCSWVKV 448
+ ++ L K+PG +W+++
Sbjct: 1508 RDLMTKRKLKKIPGYTWIEL 1527
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 279/499 (55%), Gaps = 56/499 (11%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCI---ISRFILTSLSISLHFTRSLFNNLPVTPPL 66
I+ K++ L Q+H +KT H+ I I R TS + + S+F+ LP
Sbjct: 22 IKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLP-ERNC 80
Query: 67 FAYNTLIRAYAKTSCS-IESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
FA+NT+IRA A+T ++++ +F +ML + + P+ FT+P V+KAC + G VH
Sbjct: 81 FAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVH 140
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAAC-----------------------------KEIDV- 154
L+ K GL D+++ LLRMY C +E +V
Sbjct: 141 GLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVV 200
Query: 155 -----------------AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLA 196
A+ +F+ M R VVSW+ MI+G+ +A+++FHRM ++
Sbjct: 201 LCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG 260
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ PN VTLVS++ A + L + G+ +H YA N + +D LG+ALV+MY+KCG +EKA
Sbjct: 261 DVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKA 320
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF + + N+ +W +I GLA +G+ N + ++M + G+ P +++ AILSACSH
Sbjct: 321 IQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHA 380
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLVDEG+++F++M +KP +EHYGCMVD+LGRAG +EEA +I NMP +P+ VI ++
Sbjct: 381 GLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKA 440
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGA + H + + ++L+++ P YV +++ + SGNWD A + + +
Sbjct: 441 LLGASKMHKNI-KIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMD 499
Query: 437 LNKVPGCSWVKVNDGSAEE 455
+ K PGCSW+++ DG E
Sbjct: 500 IRKDPGCSWIEI-DGVIHE 517
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 249/402 (61%), Gaps = 3/402 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F +NT+IR +T ++ + + M G DNFTY F+VK CG+ +G
Sbjct: 13 NPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQ 72
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H + K GL+ ++ NTL+ MY K+I+ A +FEEMP +V+W+++I V C
Sbjct: 73 IHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGR 132
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A+++F RM + P+ T V +SAC +L + G +HS GL V++ +
Sbjct: 133 YKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNS 192
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KP 301
L++MY+KCG VE A+++FN M+ +N+ SW MI GLA +G G+ A+ LF+KM++ L P
Sbjct: 193 LIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATP 252
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++F +L ACSH G+V+EG+ YFD M R YNI+PT++HYG MVD+LGRAGL+EEAY +
Sbjct: 253 NEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRL 312
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I++MP E N+++ R+ L ACR HG L L + + + LL+LEP+ ++YVL A++ + +G
Sbjct: 313 IKSMPIESNSIVWRTLLAACRVHGN-LELAEQVRQQLLELEPDHSSDYVLLANMYASAGQ 371
Query: 422 WDTAAELMVAINQKGLNK-VPGCSWVKVNDGSAEEMSKETAA 462
W+ + +++ +G+ K PG S++ EM A+
Sbjct: 372 WNKVVRVRKSMHIRGVQKPKPGNSYIGFQPSMRLEMESTEAS 413
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+D A VF ++ D W++MI G P A + + RM++ E ++ T LV
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKV 60
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C L + G+ IH + +GLE V + LV MY +E A +F M + L +W
Sbjct: 61 CGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAW 120
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I GR AI LF +M+Q+GLKPD +F LSAC+ LG +D G+
Sbjct: 121 NTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGR-------- 172
Query: 332 VYNIKPTMEHYG---------CMVDMLGRAGLIEEAYHIIRNM 365
+ ++H G ++DM + G++E AY I M
Sbjct: 173 --RVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKM 213
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 266/446 (59%), Gaps = 4/446 (0%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
I TL + + + + Q+H T + H+ + ++ + + + L LFN +
Sbjct: 7 ISTLFK-CRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERD 65
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
P+ +++ +I + K + F E+++ G +PDNF+ PFV+KAC + + +G +H
Sbjct: 66 PV-SWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
S + K GL D ++ +TL+ MYA C ID AK +F+ MP +D+V+ + MIAG+ C P+
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
++ +F +M+ P+ V +V++V+AC L + +H Y LDV LGTA++
Sbjct: 185 ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMI 244
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG ++ + ++F+ M +KN+ SW+ MI +G+G A+ LF M+ +G+ P+ I
Sbjct: 245 DMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRI 304
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F ++L ACSH GLVD+G F M+ Y ++P ++HY CMVD+LGRAG +++A +I N
Sbjct: 305 TFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIEN 364
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
M E + I +FLGACR H QV L + KLLL L+ + +Y+L +++ + +G W
Sbjct: 365 MEVEKDEGIWCAFLGACRIHRQV-DLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKD 423
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
A++ + ++ L K+PG +W++V++
Sbjct: 424 VAKIRNLMAKRRLKKIPGYTWIEVDN 449
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 150/282 (53%), Gaps = 4/282 (1%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
F + +C I VH+ + G+ D + N LL M A K++ A +F +M R
Sbjct: 5 FFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER 64
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSWS MI GFV + F + A P++ +L ++ AC + + G IH
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
S + NGL LD + + LV+MY+KCG ++ A ++F+ M +K+L + T+MI+G A+ G+ N
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGC 344
+ LF +M + G PD ++ I++AC+ LG +++ + D + AR Y++ +E
Sbjct: 185 ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD--VELGTA 242
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
M+DM + G I+ + I M + N + + +GA HGQ
Sbjct: 243 MIDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHGQ 283
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 246/399 (61%), Gaps = 5/399 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + + ++N +I Y + E+++LF EM++T +RPD T V+ AC +
Sbjct: 169 RKVFDXI-TERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQ 227
Query: 114 CLLIGIGGSVHSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
I +G +H+L+ G S I N + +Y+ C ++++A +FE + +DVVSW++
Sbjct: 228 SGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNT 287
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVV 230
+I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 288 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRL 347
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G+ AL T+L++MY+KCG +E A +VFN M K+L SW MI G A +GR N A L
Sbjct: 348 KGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDL 407
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F++M + G++PD I+ +LSACSH GL+D G++ F + + YNI P +EHYGCM+D+LG
Sbjct: 408 FSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLG 467
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
AGL +EA II MP EP+ VI S L AC+ HG L L ++ + L+++EPE +YV
Sbjct: 468 HAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGN-LELAESFAQKLMEIEPENSGSYV 526
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L +++ + +G W+ A + +N KG+ KVPGCS ++++
Sbjct: 527 LLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEID 565
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 187/383 (48%), Gaps = 44/383 (11%)
Query: 23 HTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPVTPPLFAYNTLIRAYA 77
H +KT L HNT +L +S HF S+F P L +NT++R A
Sbjct: 2 HAQMVKTGL-HNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQ-EPNLLIWNTMLRGLA 59
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+S + ++++ M+ G P+ +T+PF++K+C + G +H+ + K+G + D+Y
Sbjct: 60 SSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119
Query: 138 IGNTLLRMYA---------------------ACK----------EIDVAKAVFEEMPVRD 166
+L+ MYA +C ++ A+ VF+ + RD
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VVSW++MI G+V +AL++F M N P+ TLVS++SAC ++ G IH+
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 227 YAVV-NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+G + + A + +YSKCG VE A +F + K++ SW +I G
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHY 342
A+ LF +M+++G P+ ++ ++L AC+HLG +D G+ Y D+ R+ +
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK--RLKGVTNGSALR 357
Query: 343 GCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G IE A+ + +M
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSM 380
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 259/443 (58%), Gaps = 16/443 (3%)
Query: 19 LHQLHTLFLKTSLDHNTCIISR---FILTSLS--ISLHFTRSLFNNLPVTPPLFAYNTLI 73
L Q+H ++ + + + + F L SL + + +F+ + +F +NTLI
Sbjct: 33 LRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 74 RAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
R YA+ S+ ++ L+ EM +G + PD TYPF++KA G+ + +G ++HS++ + G
Sbjct: 93 RGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGF 152
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
S Y+ N+LL +YA C ++ A VF++MP +D+V+W+S+I GF P +AL ++
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M L P+ T+VSL+SAC + + G+ H Y + GL ++ L+++Y++CG
Sbjct: 213 MDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILS 311
VE+A +F+ M +KN SWT +I GLA NG G AI LF M + GL P I+F IL
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILY 332
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G+V EG YF M+ Y I+P +EH+GCMVD+L RAG +++AY I MP +PN
Sbjct: 333 ACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNV 392
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAE 427
VI R+ LGAC HG D +L +L +L+LEP +YVL +++ + W +
Sbjct: 393 VIWRTLLGACTVHG-----DSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + + G+ KVPG S V+V +
Sbjct: 448 IRKQMLRDGVRKVPGHSLVEVGN 470
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 268/484 (55%), Gaps = 38/484 (7%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
+ + LI SKT+ HL Q+H + + LDH+ + + + S+ L ++ +LF
Sbjct: 30 TNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQ 89
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P +F + +I +A +++ + +ML G+ P+ FT+ ++K C I G
Sbjct: 90 -NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGK 144
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYA---------------------------AC----K 150
++HS K+G DSD Y+ LL +YA C
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHG 204
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
E+D A+ +F+ M RD V W+ MI G+ P++AL +F RM A PN VT++S++S
Sbjct: 205 ELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLS 264
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC L + +G +HSY NG++ +V +GTALV+MYSKCG +E A VF+ + +K++ +
Sbjct: 265 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 324
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W MI G A +G A+ LF M + GL P +I+F ILSAC H G V EG + F++M
Sbjct: 325 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 384
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
Y I+P +EHYGCMV++LGRAG +E+AY +++NM EP+ V+ + LGACR HG++ L
Sbjct: 385 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIA-L 443
Query: 391 DDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +LL+ Y+L +++ + GNWD A L + G+ K PGCS ++VN+
Sbjct: 444 GEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNN 503
Query: 451 GSAE 454
E
Sbjct: 504 KVHE 507
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 262/444 (59%), Gaps = 4/444 (0%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+LI + L H +F ++S H + + ++ R LF+ + V +
Sbjct: 105 SLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISV-KDVV 163
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I Y +T E+++L+ +M+KT ++PD T VV AC + I +G +HS I
Sbjct: 164 SWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWI 223
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
G S+ I N L+ +Y+ C E++ A +F+ + +DV+SW+++I G + +AL
Sbjct: 224 EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEAL 283
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVNGLELDVALGTALVE 245
+F M + ESPN VT++S++ AC L + G IH Y + G+ +L T+L++
Sbjct: 284 LLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLID 343
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG +E A +VF+ M ++L SW MI G A +G+ N A LF+KM + G+ PD I+
Sbjct: 344 MYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDIT 403
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSACSH G++D G++ F M++ Y I P +EHYGCM+D+LG GL +EA +IR M
Sbjct: 404 FVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTM 463
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P EP+ VI S L AC+ H V L ++ + L+K+EPE +YVL +++ + +G WD
Sbjct: 464 PMEPDGVIWCSLLKACKMHNNV-ELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQV 522
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
A++ +N KG+ K PGCS ++++
Sbjct: 523 AKIRTLLNDKGIKKAPGCSSIEID 546
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 185/353 (52%), Gaps = 37/353 (10%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + S+F + P L +NT+ R +A S S+ ++KL+ M+ GL P+++++PF++K
Sbjct: 15 LSYAISIFETIQ-EPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK 73
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE------------------ 151
+C + + G +H + K+G D D Y+ +L+ MYA
Sbjct: 74 SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133
Query: 152 -------------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
I+ A+ +F+E+ V+DVVSW++MI+G+V + +AL+++ M N
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ T+V++VSAC ++ G +HS+ +G ++ + L+++YSKCG VE A
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F + +K++ SW +I G A+ LF +M+++G P+ ++ ++L AC+HLG
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 319 VDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+D G+ Y ++ R+ + ++DM + G IE A + +M T
Sbjct: 314 IDIGRWIHVYINK--RLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR 364
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 246/422 (58%), Gaps = 14/422 (3%)
Query: 37 IISRFILTSLSISLHFTRS---------LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIK 87
++ +F+L SL +H S LF+ + V + A+N +I Y K E ++
Sbjct: 203 MVDQFVLNSL---IHMYASCGDVVAAHVLFHTVQVKG-VIAWNAMIAGYVKNGDWKEVVE 258
Query: 88 LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA 147
+F ML+ D T V ACGR +G + + G+ + + L+ MYA
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA 318
Query: 148 ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C E+D A+ +F+ M RDVV+WS+MI+G+ D +AL +F+ M+ +PN VT+VS
Sbjct: 319 KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVS 378
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++SAC L + G+ +HSY L L V LGTALV+ Y+KCG ++ A K F M +N
Sbjct: 379 VLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRN 438
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+WT +I G+A NGR A+ LF+ M++ ++P ++F +L ACSH LV+EG+ +F
Sbjct: 439 TWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFT 498
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M + Y I P +EHYGCMVD+LGRAGLI+EAY IRNMP EPNAV+ R+ L AC H V
Sbjct: 499 SMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNV 558
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
++ L K ++ L+P NY+L ++ + G W AA + + +KG+ K+PGCS ++
Sbjct: 559 EIGEEAL-KQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIE 617
Query: 448 VN 449
+
Sbjct: 618 LE 619
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 178/323 (55%), Gaps = 5/323 (1%)
Query: 47 SISLHFTRSLFNNLPVTPPLFA--YNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFT 103
S L + LF P PP A YN LIR++ + +++ LF EML T + PD T
Sbjct: 115 SAHLSYAIRLFRLGP-HPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHT 173
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
VK+C R + +G V + FK G D+++ N+L+ MYA+C ++ A +F +
Sbjct: 174 VANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ 233
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
V+ V++W++MIAG+V + +++F M + VTL+S+ +AC L + G+
Sbjct: 234 VKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQW 293
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
I YA G+ L TALV+MY+KCG ++KA ++F+ M +++ +W+ MISG + R
Sbjct: 294 IAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR 353
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+++F +M T + P+ ++ ++LSAC+ LG ++ GK + R ++ T+
Sbjct: 354 CREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGK-WVHSYIRRKDLPLTVILGT 412
Query: 344 CMVDMLGRAGLIEEAYHIIRNMP 366
+VD + G I++A +MP
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMP 435
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 267/445 (60%), Gaps = 4/445 (0%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPP 65
E L++ + +L Q+H + + L + ++++ I L + S+ + R LF +P P
Sbjct: 95 EALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVP-NPD 153
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +++L++ +K SI+++ + ML +G N+T+ V+KAC + +G +HS
Sbjct: 154 SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 213
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ G SD Y+ L+ +YA ++ VAK VF+ MP R +++W+S+I+G+ P +
Sbjct: 214 HVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQE 273
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
++ +FH M + P+S T+VSL+S+C+ L + G +H YA NG +L+V LGT+L+
Sbjct: 274 SIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 333
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY++CG+V KA +VF+ M+E+N+ +WT MISG +G G A+ LF +M G +P++I+
Sbjct: 334 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 393
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN- 364
F A+LSAC+H GL+D+G+ F M Y + P +EH CMVDM GRAGL+ +AY I+
Sbjct: 394 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 453
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
+P EP + S LGACR H + L + + +L +EPE +YV+ +++ +L+G D
Sbjct: 454 IPKEPGPAVWTSMLGACRMH-RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDR 512
Query: 425 AAELMVAINQKGLNKVPGCSWVKVN 449
+ + ++ L K G S +++N
Sbjct: 513 VEMVRNMMTRRRLKKQVGYSTIEIN 537
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 267/445 (60%), Gaps = 4/445 (0%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPP 65
E L++ + +L Q+H + + L + ++++ I L + S+ + R LF +P P
Sbjct: 31 EALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVP-NPD 89
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +++L++ +K SI+++ + ML +G N+T+ V+KAC + +G +HS
Sbjct: 90 SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 149
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ G SD Y+ L+ +YA ++ VAK VF+ MP R +++W+S+I+G+ P +
Sbjct: 150 HVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQE 209
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
++ +FH M + P+S T+VSL+S+C+ L + G +H YA NG +L+V LGT+L+
Sbjct: 210 SIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 269
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY++CG+V KA +VF+ M+E+N+ +WT MISG +G G A+ LF +M G +P++I+
Sbjct: 270 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 329
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN- 364
F A+LSAC+H GL+D+G+ F M Y + P +EH CMVDM GRAGL+ +AY I+
Sbjct: 330 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 389
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
+P EP + S LGACR H + L + + +L +EPE +YV+ +++ +L+G D
Sbjct: 390 IPKEPGPAVWTSMLGACRMH-RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDR 448
Query: 425 AAELMVAINQKGLNKVPGCSWVKVN 449
+ + ++ L K G S +++N
Sbjct: 449 VEMVRNMMTRRRLKKQVGYSTIEIN 473
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 243/402 (60%), Gaps = 8/402 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + + ++N +I Y + E+++LF EM++T +RPD T VV AC +
Sbjct: 150 RKVFDEI-TERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQ 208
Query: 114 CLLIGIGGSVHSLIFKV----GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
I +G VHS + G S I N L+ +Y+ C +++ A +FE + +DVVS
Sbjct: 209 SGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVS 268
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY-- 227
W+++I G+ + +AL +F M + E PN VTL+S++ AC L + G IH Y
Sbjct: 269 WNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYID 328
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ G+ + +L T+L++MY+KCG +E A +VFN M ++L SW MI G A +GR N A
Sbjct: 329 KKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAA 388
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
LF++M ++PD I+F +LSACSH GL+D G+ F M + YN+ P +EHYGCM+D
Sbjct: 389 FDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMID 448
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
+LG +GL +EA +I MP EP+ VI S L AC+ HG L L ++ + L+K+EPE
Sbjct: 449 LLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN-LELAESFAQKLIKIEPENSG 507
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+YVL +++ + +G W+ A + +N KG+ KVPGCS ++V+
Sbjct: 508 SYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 184/354 (51%), Gaps = 41/354 (11%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + S+F + P L +NT++R +A +S + +++++ M+ G P+++++PF++K
Sbjct: 14 LPYAISVFETIQ-EPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLK 72
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------ACKEIDV-- 154
+C + G +H+ + K+G D+Y+ +L+ MYA A DV
Sbjct: 73 SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132
Query: 155 ----------------AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
A+ VF+E+ RDVVSW++MI G+V +AL++F M N
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYA----VVNGLELDVALGTALVEMYSKCGHVE 254
P+ TLVS+VSAC ++ G +HS+ +G + + AL+++YSKCG VE
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
AF +F + K++ SW +I G A+ LF +M+++G P+ ++ ++L AC+
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 315 HLGLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
HLG +D G+ Y D+ + + ++ ++DM + G IE A+ + +M
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLR--TSLIDMYAKCGDIEAAHQVFNSM 364
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 232/382 (60%), Gaps = 3/382 (0%)
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + + I ++ ML + P+ FTYP +++AC I G +H+ + K G +
Sbjct: 68 GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGFVACDSPSDALKVFHR 192
D + N L+ MY + ++ A+ VF+ MP RD VSW++MIA +V + +A +F R
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+L N + S++SACT L + G+ IH Y +G+ELD L T +++MY KCG
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+EKA +VFN + +K + SW MI GLA +G+G AI LF +M + + PD I+F +LSA
Sbjct: 248 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
C+H GLV+EGK+YF M V +KP MEH+GCMVD+LGRAGL+EEA +I MP P+A
Sbjct: 308 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 367
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+L + +GACR HG L + +GK +++LEP YVL A++ + +G W+ A++ +
Sbjct: 368 VLGALVGACRIHGNT-ELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426
Query: 433 NQKGLNKVPGCSWVKVNDGSAE 454
N +G+ K PG S ++ G E
Sbjct: 427 NDRGVKKAPGFSMIESESGVDE 448
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 3/246 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP-LFAYNTLIRAYAK 78
Q+H LK + ++ I ++ SL R +F+N+P ++N +I AY +
Sbjct: 115 QIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQ 174
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++ E+ LFD M + D F ++ AC + G +H I K G++ D +
Sbjct: 175 SNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL 234
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
T++ MY C ++ A VF E+P + + SW+ MI G A+++F M+
Sbjct: 235 ATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMV 294
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAF 257
+P+ +T V+++SAC V G+ Y V GL+ + +V++ + G +E+A
Sbjct: 295 APDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEAR 354
Query: 258 KVFNLM 263
K+ N M
Sbjct: 355 KLINEM 360
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 35/248 (14%)
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G++ + + ++ RM + SPN T L+ AC + G+ IH++ + G
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM--REKNLQSWTIMISGLADNGRGNYAISLFA 292
D L+ MY +E+A +VF+ M R++N SW MI+ + R + A +LF
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGK----------------------------N 324
+M + D +++LSAC+ LG +++GK
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246
Query: 325 YFDEMARVYNIKPT--MEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLG 379
++ + V+N P + + CM+ L G E A + + M E P+ + + L
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306
Query: 380 ACRNHGQV 387
AC + G V
Sbjct: 307 ACAHSGLV 314
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 276/446 (61%), Gaps = 7/446 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
L + T+ L+QLH ++ D N +I + F S +++ +F+ +
Sbjct: 61 LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIE-NAD 119
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR + + + + + + ML+ G+ DNFT+ F++K G+ I +G +H
Sbjct: 120 GFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHV 179
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K+GLDS Y+ NTL+ MY K++++A+ +F+E+P D+V+W+++I V+C ++
Sbjct: 180 NILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNE 239
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F +M + P+ TLV +SAC++L + G +HS+ N +A+ +L++
Sbjct: 240 ALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLID 299
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK-PDSI 304
MY+KCG VE A ++FN + KN+ +W MI GLA +G A++LF+ M+ ++ PD +
Sbjct: 300 MYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGV 359
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F A+L AC++ G V+EG+ YFD M + +NI+PT++HYG MVD+LGRAG +EEAY +I++
Sbjct: 360 TFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP E NAVI R+ L AC+ HG V L + + +L++ + ++YVL A++ + SG W+
Sbjct: 420 MPMECNAVIWRTLLAACQMHGNV-ELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNE 478
Query: 425 AAELMVAINQKGLNK-VPGCSWVKVN 449
+ ++++KG+ K PG S++++N
Sbjct: 479 MIKTRKSMHRKGVEKPEPGNSYLEIN 504
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 264/483 (54%), Gaps = 37/483 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
L++ L +H L+T L + SR F + S + LH+ + + + P
Sbjct: 23 LLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQ-NPN 81
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF YN LIR + + S + + L+ GL PDN T+PF+VKAC + +G H
Sbjct: 82 LFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHG 141
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K G + D Y+ N+L+ MYA+ +I+ A++VF+ M DVVSW+ MIAG+ C
Sbjct: 142 QAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKS 201
Query: 186 ALKVFHRMKLAN---------------------ES----------PNSVTLVSLVSACTS 214
A ++F RM N E+ N +V ++S+C
Sbjct: 202 ARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAH 261
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + GE H Y + N L L++ LGTA+V+MY++CG+VEKA VF + EK++ WT +
Sbjct: 262 LGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTAL 321
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I+GLA +G A+ F++M + G P I+F+A+L+ACSH G+V+ G F+ M R +
Sbjct: 322 IAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHG 381
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
++P +EHYGCMVD+LGRAG + +A + MP +PNA I R+ LGACR H V + + +
Sbjct: 382 VEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNV-EVGERV 440
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
GK+LL+++PE +YVL +++ + + W + + KG+ K PG S +++ DG
Sbjct: 441 GKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEI-DGKVH 499
Query: 455 EMS 457
E +
Sbjct: 500 EFT 502
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 247/398 (62%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P+ + ++N +I YA+T + E+++LF EM+KT +RPD T VV AC +
Sbjct: 174 QKMFDEIPIKD-VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 232
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ +Y C E++ A +FE + +DV+SW+++
Sbjct: 233 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTL 292
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 293 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK 352
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ + T+L++MY+KCG +E A +VF+ + ++L SW MI G A +GR N A +F
Sbjct: 353 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIF 412
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + ++PD I+F +LSACSH G++D G++ F M Y I P +EHYGCM+D+LG
Sbjct: 413 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGH 472
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EP+ +YVL
Sbjct: 473 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV-ELGESYAQNLIKIEPKNPGSYVL 531
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A++ +N KG+ KVPGCS ++++
Sbjct: 532 LSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 569
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 192/382 (50%), Gaps = 41/382 (10%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
L +H +KT L + +S+ I L+ L + S+F + P L +NT+ R
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ-EPNLLIWNTMFR 61
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+A +S + ++ L+ M+ GL P+ +T+PF++K+C + G +H + K+G D
Sbjct: 62 GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121
Query: 135 DKYIGNTLLRMYAACKEIDVAKAV-------------------------------FEEMP 163
D Y+ +L+ MY ++ A+ V F+E+P
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
++DVVSW++MI+G+ + +AL++F M N P+ T+VS+VSAC ++ G
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+HS+ +G ++ + AL+++Y KCG VE A +F + K++ SW +I G
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNIKPTME 340
A+ LF +M+++G P+ ++ +IL AC+HLG ++ G+ Y ++ R+ +
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK--RLKGVANASS 359
Query: 341 HYGCMVDMLGRAGLIEEAYHII 362
H ++DM + G IE A +
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVF 381
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 267/470 (56%), Gaps = 35/470 (7%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNL-PVTPPLFAYNTLIRAY 76
L Q+H +KT+ + ++R ++ + + S H+ + +F + P F +N+ ++A
Sbjct: 44 LRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKAL 103
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
A+ I++I LF + + + PD FT V++AC L + G +H ++ KVG S+
Sbjct: 104 AEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNL 163
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV---------------------------- 168
Y+ N ++ +YA+C E+ A+ +FE+MP RDVV
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPER 223
Query: 169 ---SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
SW+SMIAG+V C +A+ +F +M+ A N VT+V++++AC L + G IH
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
Y+ +G + +V + L++MY KCG +E+A KVF M E+ + SW+ MI GLA +GR
Sbjct: 284 EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAE 343
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
A+ LF+ M Q G++P+ ++F +L ACSH+GL+ EG+ +F M R Y I P +EHYGCM
Sbjct: 344 EALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCM 403
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VD+L RAGL+ EA+ I NMP +PN V+ + LGACR H V ++ + K LL+L+P
Sbjct: 404 VDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAI-KHLLELDPLN 462
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
YV+ +++ + +G W+ A + + + + K PG S + V DG E
Sbjct: 463 DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV-DGVVHE 511
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 273/493 (55%), Gaps = 51/493 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLD---HNTCIISRFILTSLSISLHFTR---------- 54
T+I+ K++ LHQ+H + T L H++ ++ ILT+ + L T
Sbjct: 20 TVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALT 79
Query: 55 ----SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKA 110
S+FN +P P F YNT+IRA+ S + ++ +F M + + PD T+PF +KA
Sbjct: 80 GYALSVFNRIP-NPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKA 138
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------ACK------------- 150
C + + ++HS FK G +D ++ NTL+ +Y+ AC+
Sbjct: 139 CSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSY 198
Query: 151 -----------EIDVAKAVFEEMPVRDVVSWSSMIAGFV-ACDSPSDALKVFHRMKLANE 198
+ D A+ +F++MP+RD VSW +++AG+ + D DA+++F+RM ++
Sbjct: 199 NALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTV 258
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+++ LVS +SAC L + G+SIH Y N + ++ L T LV++Y+KCG +E A +
Sbjct: 259 RPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETARE 318
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F +KNL +W ++ GL +GRG+ ++ F++MI+ G+KPD +SF IL C H GL
Sbjct: 319 IFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGL 378
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V E +N+F EM VY + ++HYGCM D+LGRAGLI EA +I MP + + L
Sbjct: 379 VCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVL 438
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
G CR HG V + + + ++ L PE Y + A + + +G W+ A + ++ + +
Sbjct: 439 GGCRIHGNV-EIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVK 497
Query: 439 KVPGCSWVKVNDG 451
K PGCS V++N+G
Sbjct: 498 KNPGCSLVQLNNG 510
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 274/499 (54%), Gaps = 56/499 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCI---ISRFILTS--LSISLHFTRSLFNNLPVTPPLFA 68
+T+ L Q+H +F+K+ +T I RF TS L + +FN +P F+
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP-QRNCFS 92
Query: 69 YNTLIRAYAKTS--CSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+NT+IR ++++ ++ +I LF EM+ + P+ FT+P V+KAC + I G +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACK----------------------------------- 150
L K G D+++ + L+RMY C
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 151 ----------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+ A+ +F++M R VVSW++MI+G+ DA++VF MK + P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N VTLVS++ A + L ++ GE +H YA +G+ +D LG+AL++MYSKCG +EKA VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ +N+ +W+ MI+G A +G+ AI F KM Q G++P +++ +L+ACSH GLV+
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+ YF +M V ++P +EHYGCMVD+LGR+GL++EA I NMP +P+ VI ++ LGA
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR G V + + +L+ + P YV +++ + GNW +E+ + + +K + K
Sbjct: 453 CRMQGNV-EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
Query: 441 PGCSWVKVNDGSAEEMSKE 459
PGCS + + DG E E
Sbjct: 512 PGCSLIDI-DGVLHEFVVE 529
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 271/472 (57%), Gaps = 38/472 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNNLPVTPPLFAYNTLIR 74
L Q+H LKT L ++ I++F+ +S + L + + +F+ P F +N +IR
Sbjct: 59 LKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFD-RPDTFLWNLMIR 117
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
++ + S+ L+ ML + +T+P ++KAC + +H+ I K+G ++
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS---------------------- 172
D Y N+L+ YAA +A +F+ +P D VSW+S
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 173 ---------MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
MI+G+V +AL++FH M+ ++ P++V+L + +SAC L + G+
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IHSY + +D LG L++MY+KCG + +A +VF ++ K++Q+WT +ISG A +G
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGH 357
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
G AIS F +M + G+KP+ I+F+ +L+ACS+ GLV+EGK F M R YN+KPT+EHYG
Sbjct: 358 GREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYG 417
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
C+VD+L RAGL++EA I+ MP +PNAVI + L ACR H + L + +G++L+ ++P
Sbjct: 418 CVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI-ELGEEIGEILIAIDP 476
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
G YV A++ ++ WD AAE + ++G+ KVPGCS + + +G+ E
Sbjct: 477 YHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISL-EGTTHE 527
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 267/470 (56%), Gaps = 35/470 (7%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNL-PVTPPLFAYNTLIRAY 76
L Q+H +KT+ + ++R ++ + + S H+ + +F + P F +N+ ++A
Sbjct: 44 LRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKAL 103
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
A+ I++I LF + + + PD FT V++AC L + G +H ++ KVG S+
Sbjct: 104 AEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNL 163
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV---------------------------- 168
Y+ N ++ +YA+C E+ A+ +FE+MP RDVV
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPER 223
Query: 169 ---SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
SW+SMIAG+V C +A+ +F +M+ A N VT+V++++AC L + G IH
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
Y+ +G + +V + L++MY KCG +E+A KVF M E+ + SW+ MI GLA +GR
Sbjct: 284 EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAE 343
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
A+ LF+ M Q G++P+ ++F +L ACSH+GL+ EG+ +F M R Y I P +EHYGCM
Sbjct: 344 EALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCM 403
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VD+L RAGL+ EA+ I NMP +PN V+ + LGACR H V ++ + K LL+L+P
Sbjct: 404 VDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAI-KHLLELDPLN 462
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
YV+ +++ + +G W+ A + + + + K PG S + V DG E
Sbjct: 463 DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV-DGVVHE 511
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 246/398 (61%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +PV + ++N +I YA+T E+++LF EM+KT +RPD T VV AC +
Sbjct: 220 QKLFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N+L+ +Y+ C E++ A +FE + +DV+SW+++
Sbjct: 279 SGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTL 338
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E PN VT++S++ AC L + G IH Y +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
+L T+L++MY+KCG +E A +VFN + K+L SW MI G A +GR + A +F
Sbjct: 399 SATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIF 458
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACS G++D G++ F M + Y I P +EHYGCM+D+LG
Sbjct: 459 SRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGH 518
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I NM EP+ VI S L AC+ G V L ++ + L+K+EPE YVL
Sbjct: 519 SGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNV-ELGESFAQNLIKIEPENPGCYVL 577
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A++ +N KG+ KVPGCS ++++
Sbjct: 578 LSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 615
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 206/397 (51%), Gaps = 43/397 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPV 62
+L+ KT+ L +H +KT L HNT +L IS HF S+F +
Sbjct: 38 SLLHNCKTLQSLRLIHAQMIKTGL-HNTNYALSKLLELCVISPHFDGLPYAISVFETIQ- 95
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P L +NT+ R +A +S + ++KL+ M+ GL P+++T+PF++K+C + G
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155
Query: 123 VHSLIFKVGLDSDKYIGNTLL-------------------------------RMYAACKE 151
+H + K+G D D ++ +L+ + YA+
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I+ A+ +F+E+PV+DVVSW++MI+G+ + +AL++F M N P+ T+V++VSA
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C ++ G +HS+ +G ++ + +L+++YSKCG +E A +F + K++ SW
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDE 328
+I G A+ LF +M+++G +P+ ++ +IL AC+HLG +D G+ Y D+
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++ ++DM + G IE A+ + ++
Sbjct: 396 RLKSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSI 430
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 267/451 (59%), Gaps = 10/451 (2%)
Query: 7 ETLIQLSKTVHH---LHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNL 60
E LI L K+ H L Q+H + TS + + RF+ + S L ++R LF+ L
Sbjct: 28 EPLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFD-L 86
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P + YN ++RAY+ + +E + ++ +M + G+R D + F VK+C + L + G
Sbjct: 87 LTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFG 146
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+H+ IF G +D + +++ +Y+ C + + A +F+E+P +DVV+W+ +I+
Sbjct: 147 IQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRN 206
Query: 181 DSPSDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
DAL +F M+ P+ VT + L+ AC L + GE IH Y +G +
Sbjct: 207 KRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESN 266
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
L +L+ MYS+CG ++KA++VF+ M EKN+ SW+ MISGL+ NG G AI F +M + G
Sbjct: 267 LCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 326
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++P +F+A+LSACSH GLVDEG +FD M + + I P + HYGC+VD+LGRAG++++A
Sbjct: 327 VEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQA 386
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
Y +I +M P+A + R+ LGACR HG L + + + L++L+ + +YVL ++ S
Sbjct: 387 YELIMSMEVRPDATMWRTLLGACRIHGHG-NLGERIVEHLIELKSQEAGDYVLLLNIYSS 445
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+GNWD EL + +KG+ P C+ +++N
Sbjct: 446 AGNWDKVTELRKLMKEKGIYTTPCCTTIELN 476
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 267/450 (59%), Gaps = 15/450 (3%)
Query: 3 SRHIETLI--QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLF 57
SR + LI +L ++ HL Q+H +SL +++ IIS + ++SLS++ L F R+L
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + P +N L R Y+ + +ESI ++ EM + G++P+ T+PF++KAC L +
Sbjct: 71 LHSSDSTPS-TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G + + K G D D Y+GN L+ +Y CK+ A+ VF+EM R+VVSW+S++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
V + + F M P+ T+V L+SAC N+ G+ +HS +V LEL+
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNC 247
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-Q 296
LGTALV+MY+K G +E A VF M +KN+ +W+ MI GLA G A+ LF+KM+ +
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+ ++P+ ++F +L ACSH GLVD+G YF EM +++ IKP M HYG MVD+LGRAG +
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLA 412
EAY I+ MP EP+AV+ R+ L AC H D+ +G K L++LEP+ N V+
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHD--EDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
A+ + + W AAE+ + + + K+ G
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKIAG 455
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 253/440 (57%), Gaps = 35/440 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +FN++ P + ++ LI Y TS ++ +F + +GLRPD+F V ACG
Sbjct: 308 QKVFNHIQ-NPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGH 366
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------------------- 147
+ G VH ++F+ L SD +GN L+ MY+
Sbjct: 367 RKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSL 426
Query: 148 -----ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPN 201
C +I+ A+ +F+EMP+R+ VSW++MI G+V + P L++F M+ + P
Sbjct: 427 LNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPT 486
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T+V+++S C + G S+H Y L+LDV + AL++MY+K G + A K+F
Sbjct: 487 VITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQ 546
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M ++++ SWT MISGLA +G+G +A+ F+ M ++G P+ ++ ++LSACSH GLV E
Sbjct: 547 EMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVE 606
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++ F +M + + IKP ++HYGCMVD+LGRAGL+ EA +I +MP +P++VI RS L AC
Sbjct: 607 GRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSAC 666
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
HG L L + GK++++LEP+ Y+L ++ + W+ A + A+ + + K P
Sbjct: 667 LVHGN-LALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKP 725
Query: 442 GCSWVKVNDGSAEEMSKETA 461
GCSWV+VN G E E A
Sbjct: 726 GCSWVEVN-GVVHEFLAEDA 744
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 38/298 (12%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGL--DSDKYIGNTLLRMYAACKEIDVAKAVFE 160
T+ F+++ CG + +H +GL +++ LL Y A+ VF
Sbjct: 256 TFYFLLQKCGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 312
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
+ D+VSW+ +I+ ++ P A +F + + P+S +V VSAC ++
Sbjct: 313 HIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSN 372
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYS-------------------------------K 249
G +H L D +G AL++MYS K
Sbjct: 373 GRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 432
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK-PDSISFSA 308
C +E A ++F+ M +N SWT MI+G + LF +M G P I+ A
Sbjct: 433 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVA 492
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LS C+ +G D G + + + N+ + ++DM ++G + A I + MP
Sbjct: 493 VLSGCADIGAFDLGSSVHGYVNKT-NLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 549
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 240/398 (60%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R++F+ +PV + ++N +I Y +T E+++LF EM+KT +RPD T V+ A R
Sbjct: 149 RNMFDEIPVKD-VVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASAR 207
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ Y+ C E++ A +F + +DV+SW+ +
Sbjct: 208 SGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNIL 267
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 268 IGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLK 327
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MYSKCG +E A +VFN M K+L +W MI G A +GR N A +F
Sbjct: 328 GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIF 387
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + +KPD I+F +LSACSH G++D G++ F M Y I P +EHYGCM+D+LG
Sbjct: 388 SRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGH 447
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L + + L K+EP +YVL
Sbjct: 448 SGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNV-ELGEKFAQNLFKIEPNNPGSYVL 506
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A + +N KG+ KVPGCS ++++
Sbjct: 507 LSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEID 544
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 187/358 (52%), Gaps = 37/358 (10%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
IL+ L + S+F + P L +NT+ R +A + + ++KL+ M+ GL P++
Sbjct: 5 ILSPHFEGLPYAISVFETIQ-EPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNS 63
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM---------------- 145
+T+PF++K+C + G +H + K+G + D Y+ +L+ M
Sbjct: 64 YTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDR 123
Query: 146 ---------------YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
YA+ I+ A+ +F+E+PV+DVVSW++MI+G+V + +AL++F
Sbjct: 124 SSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELF 183
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M N P+ T+V+++SA ++ G +HS+ +G ++ + AL++ YSKC
Sbjct: 184 KEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC 243
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G +E A +F + K++ SW I+I G A+ LF +M+++G P+ ++ +IL
Sbjct: 244 GEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSIL 303
Query: 311 SACSHLGLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
AC+HLG +D G+ Y D+ R+ + ++DM + G IE A+ + +M
Sbjct: 304 HACAHLGAIDIGRWIHVYIDK--RLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 266/446 (59%), Gaps = 17/446 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTPP 65
++L ++ HL Q+H +SL +++ IIS I ++SLS + L F R+L + + P
Sbjct: 19 FLKLCSSIKHLLQIHGQIHVSSLQNDSFIISELIRVSSLSHTKDLAFARTLLLHSSDSTP 78
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+N L R Y+ + +ESI ++ EM + ++P+ T+PF++KAC L + G +
Sbjct: 79 S-TWNMLTRGYSSSDTPVESIWVYSEMKRRRIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G DSD Y+GN L+ +Y +CK+ A+ VF+EM R+VVSW+S++ V +
Sbjct: 138 EVLKHGFDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKFNL 197
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
++ F M P+ T+V L+SAC N+ G+ +HS +V LEL+ LGTALV+
Sbjct: 198 VVECFFEMIGRQFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVD 255
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSI 304
MY+K G ++ A VF M +KN+ +W+ MI GLA G A+ LF+KM+ ++ ++P+ +
Sbjct: 256 MYAKSGGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L ACSH GLVD+G YF EM + + IKP M HYG MVD+LGRAG + EAY I+
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGRAGRLNEAYDFIQK 375
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLG------KLLLKLEPELGANYVLAASVSSL 418
MP EP+AV+ R+ L AC H + +D+ G K L++LEP+ N V+ A+ +
Sbjct: 376 MPFEPDAVVWRTLLSACSIH----HDEDDKGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCS 444
+ WD AAE+ + + + K+ G S
Sbjct: 432 ARMWDEAAEVRRVMKETKMKKIAGES 457
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 254/440 (57%), Gaps = 35/440 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +FN++ P + ++ LI Y TS ++ +F + +GLRPD+F V ACG
Sbjct: 57 QKVFNHIQ-NPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGH 115
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------------------- 147
+ G VH ++F+ L SD +GN L+ MY+
Sbjct: 116 RKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSL 175
Query: 148 -----ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPN 201
C +I+ A+ +F+EMP+R+ VSW++MI G+V + P L++F M+ + P
Sbjct: 176 LNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPT 235
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T+V+++S C + G S+H Y L+LDV + AL++MY+K G + A K+F
Sbjct: 236 VITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQ 295
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M ++++ SWT MISGLA +G+G +A+ F+ M ++G+ P+ ++ ++LSACSH GLV E
Sbjct: 296 EMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVE 355
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++ F +M + + IKP ++HYGCMVD+LGRAGL+ EA +I +MP +P++VI RS L AC
Sbjct: 356 GRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSAC 415
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
HG L L + GK++++LEP+ Y+L ++ + W+ A + A+ + + K P
Sbjct: 416 LVHGN-LALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKP 474
Query: 442 GCSWVKVNDGSAEEMSKETA 461
GCSWV+VN G E E A
Sbjct: 475 GCSWVEVN-GVVHEFLAEDA 493
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 38/298 (12%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGL--DSDKYIGNTLLRMYAACKEIDVAKAVFE 160
T+ F+++ CG + +H +GL +++ LL Y A+ VF
Sbjct: 5 TFYFLLQKCGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 61
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
+ D+VSW+ +I+ ++ P A +F + + P+S +V VSAC ++
Sbjct: 62 HIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSN 121
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYS-------------------------------K 249
G +H L D +G AL++MYS K
Sbjct: 122 GRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 181
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK-PDSISFSA 308
C +E A ++F+ M +N SWT MI+G + LF +M G P I+ A
Sbjct: 182 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVA 241
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LS C+ +G D G + + + N+ + ++DM ++G + A I + MP
Sbjct: 242 VLSGCADIGAFDLGSSVHGYVNKT-NLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 298
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 249/399 (62%), Gaps = 2/399 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ + V + +++ ++ +AK I F E+++ G RPDN+T PFV++AC
Sbjct: 116 LFDGMCVRDSV-SWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 174
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H +++K GLD D ++ L+ MY C+EI+ A+ +F++M RD+V+W+ MI
Sbjct: 175 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIG 234
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ C +++L +F +M+ P+ V +V++V AC L + I Y +L
Sbjct: 235 GYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL 294
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV LGTA+++MY+KCG VE A ++F+ M EKN+ SW+ MI+ +G+G A+ LF M+
Sbjct: 295 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 354
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+G+ PD I+ +++L ACSH GLV+EG +F M Y+++ ++HY C+VD+LGRAG +
Sbjct: 355 SSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRL 414
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+EA +I++M E + + +FLGACR H V+ L + LL+L+ + +YVL +++
Sbjct: 415 DEALKLIKSMTIEKDEGLWGAFLGACRTHKDVV-LAEKAATSLLELQSQNPGHYVLLSNI 473
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ +G W+ A++ ++Q+ L K PG +W++V++ S +
Sbjct: 474 YANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQ 512
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 251/399 (62%), Gaps = 2/399 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ + V + +++ ++ +AK + F E+++ G RPDN+T PFV++AC
Sbjct: 792 LFDGMCVRDSV-SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLK 850
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H +++K GLD D ++ L+ MY C+EI+ A+ +F++M RD+V+W+ MI
Sbjct: 851 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIG 910
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ C + +++L +F +M+ P+ V +V++V AC L + +I Y +L
Sbjct: 911 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 970
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV LGTA+++M++KCG VE A ++F+ M EKN+ SW+ MI+ +G+G A+ LF M+
Sbjct: 971 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 1030
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
++G+ P+ I+ ++L ACSH GLV+EG +F M Y+++ ++HY C+VD+LGRAG +
Sbjct: 1031 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRL 1090
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+EA +I +M E + + +FLGACR H V L + LL+L+P+ +Y+L +++
Sbjct: 1091 DEALKLIXSMTXEKDEGLWGAFLGACRTHKDVX-LAEKAATSLLELQPQNPGHYILLSNI 1149
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ +G W+ A++ ++Q+ L K+PG +W++V++ S +
Sbjct: 1150 YANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQ 1188
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 160/332 (48%), Gaps = 18/332 (5%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
F + A C + VH+ G+ + + N L+ Y+ + +D A +F+ M VR
Sbjct: 64 FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSWS M+ GF + F + P++ TL ++ AC L N++ G IH
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
GL+LD + ALV+MY KC +E A +F+ M+E++L +WT+MI G A+ G+ N
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
++ LF KM + G+ PD ++ ++ AC+ LG + + + D+ + + + M
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR-IIDDYIQRKKFQLDVILGTAM 302
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
+DM + G +E A I M E N + + + A HGQ G+ L L P +
Sbjct: 303 IDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ--------GRKALDLFPMM 353
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
++ +L + T A L+ A + GL
Sbjct: 354 LSSGMLPDKI--------TLASLLYACSHAGL 377
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 10/289 (3%)
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G+ + + N L+ Y+ + +D A +F+ M VRD VSWS M+ GF + F
Sbjct: 765 GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ P++ TL ++ AC L N++ G IH GL+LD + ALV+MY KC
Sbjct: 825 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+E A +F+ M E++L +WT+MI G A+ G N ++ LF KM + G+ PD ++ ++
Sbjct: 885 REIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV 944
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
AC+ LG + + + D + R + + M+DM + G +E A I M E N
Sbjct: 945 FACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKN 1002
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+ + + A HGQ G+ L L P + + +L ++ +S
Sbjct: 1003 VISWSAMIAAYGYHGQ--------GRKALDLFPMMLRSGILPNKITLVS 1043
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 8/264 (3%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
+Q+ + +HH+ L LDH C + + + R LF+ + L +
Sbjct: 852 LQMGRLIHHIVYKFGL----DLDHFVCA-ALVDMYGKCREIEDARFLFDKM-XERDLVTW 905
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+I YA+ + ES+ LFD+M + G+ PD VV AC + + ++ I +
Sbjct: 906 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 965
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
D +G ++ M+A C ++ A+ +F+ M ++V+SWS+MIA + AL +
Sbjct: 966 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 1025
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTALVEMYS 248
F M + PN +TLVSL+ AC+ V G S + + DV T +V++
Sbjct: 1026 FPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLG 1085
Query: 249 KCGHVEKAFK-VFNLMREKNLQSW 271
+ G +++A K + ++ EK+ W
Sbjct: 1086 RAGRLDEALKLIXSMTXEKDEGLW 1109
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 12/266 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTC--IISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+Q+ + +HH+ L LDH C ++ ++ + R LF+ + L
Sbjct: 176 LQMGRLIHHIVYKFGL----DLDHFVCAALVDMYVKCR---EIEDARFLFDKMQ-ERDLV 227
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+ +I YA+ + ES+ LF++M + G+ PD VV AC + + + I
Sbjct: 228 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 287
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ D +G ++ MYA C ++ A+ +F+ M ++V+SWS+MIA + AL
Sbjct: 288 QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 347
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTALVEM 246
+F M + P+ +TL SL+ AC+ V G S + + DV T +V++
Sbjct: 348 DLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDL 407
Query: 247 YSKCGHVEKAFKVFNLMR-EKNLQSW 271
+ G +++A K+ M EK+ W
Sbjct: 408 LGRAGRLDEALKLIKSMTIEKDEGLW 433
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
T+L VR +H A V+G+ ++ + LV YS ++ A+ +F+ M ++ SW+
Sbjct: 749 TNLTQVR---QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWS 805
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR- 331
+M+ G A G F ++I+ G +PD+ + ++ AC L KN +M R
Sbjct: 806 VMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDL------KNL--QMGRL 857
Query: 332 ----VYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA---CR 382
VY ++H+ C +VDM G+ IE+A + M E + V +G C
Sbjct: 858 IHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECG 916
Query: 383 NHGQVLYLDDNL 394
N + L L D +
Sbjct: 917 NANESLVLFDKM 928
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 264/447 (59%), Gaps = 7/447 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI---LTSLSISLHFTRSLFNNLPVTP 64
+LI+ HL Q+H ++TSL N I +F+ S S + ++ +F+ + + P
Sbjct: 73 SLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQI-MKP 131
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
YN +IRAY+ + + L+ EM + G+ P+ + FV+K+C R + G +H
Sbjct: 132 SGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIH 191
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ I + G SD + TL+ +Y+ C + + A VF+E+P D VSW+ +I+ +
Sbjct: 192 ARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTR 251
Query: 185 DALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
DAL++F M+ + P+ VT + L+ AC +L + GE +H+Y +G + + L +
Sbjct: 252 DALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNS 311
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ MYS+CG +EKA+ +F M E+N+ SW+ MISG A +G G AI F +M Q G+ PD
Sbjct: 312 LITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPD 371
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ + +LSACSH GLVD+G +FD M++V+ I+P + HYGCMVD+LGRAGL+++AY +I
Sbjct: 372 DQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLI 431
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+M +P++ + R+ LGACR H + +G L++L+ + +YVL ++ S GNW
Sbjct: 432 MSMVIKPDSTLWRTLLGACRIHRHATLGERVIGH-LIELKAQEAGDYVLLLNIYSSVGNW 490
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVN 449
D +L + +KG+ PGCS +++
Sbjct: 491 DKVTDLRKFMKEKGIQTSPGCSTIELK 517
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 267/476 (56%), Gaps = 45/476 (9%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL----PVTPPLFAYNTLIR 74
L ++H +K SL ++ ++++ + + H + + NL P F YN +IR
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMV----DVCNHHAETEYANLLFKRVADPNAFLYNAMIR 85
Query: 75 AYAKTSCSIESIKLFDEML-----KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
AY + +I ++ +ML + + PD FT+PFVVK+C + +G VH +FK
Sbjct: 86 AYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFK 145
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP------ 183
G S+ + N+L+ MY C +D A VFEEM RD VSW+++I+G V
Sbjct: 146 FGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAI 205
Query: 184 -------------------------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
+DAL+ F RM++ P+ ++LVS++ AC L +
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGAL 265
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ IH YA G ++ + AL+EMY+KCG +++ ++F+ M E+++ SW+ MI GL
Sbjct: 266 ELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGL 325
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A++GR + AI LF +M + ++P+ I+F +LSAC+H GL++EG YF+ M R YNI+P
Sbjct: 326 ANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPG 385
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHYGC+V++LG +G +++A +I+ MP +P++ I S L +CR+H L + + L
Sbjct: 386 VEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSN-LEIAVIAMEHL 444
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
L+LEP NYVL +++ + G WD + + + K + K PGCS ++V++ E
Sbjct: 445 LELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQE 500
>gi|357487485|ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515365|gb|AES96988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 255/442 (57%), Gaps = 8/442 (1%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSI--SLHFTRSLFNNLPVTPPLFAYNT 71
++ LHQL SL ++T I+S+ + SLS +L R L + P ++N
Sbjct: 22 SITKLHQLQAQIHLNSLHNDTHILSQLVYFFSLSPFKNLSHARKLVFHFSNNPSPISWNI 81
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIR YA + IESI +F +M + G++P+ TYPF+ K+C L++ G VH+ + K G
Sbjct: 82 LIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHADLVKFG 141
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
LDSD Y+ N ++ Y CK+I A+ VF+EM VR +VSW+S++ V SD + F
Sbjct: 142 LDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFF 201
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M+ P+ ++V L+S C L + G +HS ++ G+ L V LGTALV+MY K G
Sbjct: 202 KMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSG 261
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM---IQTGLKPDSISFSA 308
+ A VF M ++N+ +W+ MI GLA +G A+ LF M + P+ +++
Sbjct: 262 ALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLG 321
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH G+VDEG YF +M V+ IKP M HYG MVD+LGRAG + EAY I++MP
Sbjct: 322 VLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFA 381
Query: 369 PNAVILRSFLGACRNHG--QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+ ++ R+ L AC H + D + K LL++EP+ G N V+ A++ + GNW+ AA
Sbjct: 382 PDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAA 441
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
+ + GL K+ G S V +
Sbjct: 442 NVRRVMRDGGLKKMAGESCVDL 463
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 256/435 (58%), Gaps = 5/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H K LD + + + + L + + S++ + +F +P + ++N+ I A AK
Sbjct: 578 QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV-SWNSFIGALAKY 636
Query: 80 SCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
S+ +++K F EM++ G RP+ T+ ++ A ++G+G +H+LI K + D I
Sbjct: 637 EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAI 696
Query: 139 GNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
N LL Y C++++ + +F M RD VSW+SMI+G++ A+ + M
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 756
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ + T +++SAC S+ + G +H+ AV LE DV +G+ALV+MY+KCG ++ A
Sbjct: 757 QKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYAS 816
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+ F LM +N+ SW MISG A +G G A+ +F +M Q G PD ++F +LSACSH+G
Sbjct: 817 RFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVG 876
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVDEG +F M VY + P +EH+ CMVD+LGRAG +++ I+ MP +PN +I R+
Sbjct: 877 LVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTV 936
Query: 378 LGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGA CR +G+ L K+L++LEP+ NYVL +++ + GNW+ E +A+ +
Sbjct: 937 LGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAA 996
Query: 437 LNKVPGCSWVKVNDG 451
+ K GCSWV + DG
Sbjct: 997 VKKDAGCSWVNMKDG 1011
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 5/334 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F +P + ++N++I E++ F M + G+ P NF+ + +C
Sbjct: 512 SVFQLMP-SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSL 570
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G +H FK GLD D + N LL +YA I+ + VF +MP D VSW+S I
Sbjct: 571 GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFI 630
Query: 175 AGFVACD-SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ S ALK F M A PN VT +++++A +S + G IH+ + +
Sbjct: 631 GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ-SWTIMISGLADNGRGNYAISLFA 292
D A+ AL+ Y KC +E +F+ M E+ + SW MISG +G + A+ L
Sbjct: 691 ADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVW 750
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M+Q G K D +F+ +LSAC+ + ++ G R ++ + +VDM +
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRAC-LESDVVVGSALVDMYAKC 809
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G I+ A MP N S + HG
Sbjct: 810 GKIDYASRFFELMPVR-NIYSWNSMISGYARHGH 842
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 2/205 (0%)
Query: 120 GGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH+ +F+ GL D+ IGN L+ MY C ID A +VF+ MP +D VSW+SMI+G
Sbjct: 474 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ +A+ FH MK P++ +++S +S+C+SL + G IH GL+LDV+
Sbjct: 534 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 593
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD-NGRGNYAISLFAKMIQT 297
+ AL+ +Y++ + + KVF M E + SW I LA A+ F +M+Q
Sbjct: 594 VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 653
Query: 298 GLKPDSISFSAILSACSHLGLVDEG 322
G +P+ ++F IL+A S ++ G
Sbjct: 654 GWRPNRVTFINILAAVSSFSVLGLG 678
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 20 HQLHTLFLKTSL-DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
HQ+H L LK S+ D N + + +F+ + ++N++I Y
Sbjct: 679 HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ +++ L M++ G + D FT+ V+ AC + G VH+ + L+SD +
Sbjct: 739 SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G+ L+ MYA C +ID A FE MPVR++ SW+SMI+G+ ALK+F RMK +
Sbjct: 799 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858
Query: 199 SPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
SP+ VT V ++SAC+ + V G + S V GL + + +V++ + G V+K
Sbjct: 859 SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918
Query: 258 KVFNLM-REKNLQSW-TIMISGLADNGRGNYAISLFAKMI 295
M + N+ W T++ + NGR AKM+
Sbjct: 919 DFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKML 958
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 182/372 (48%), Gaps = 16/372 (4%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAY 69
+ S +++ + LH KT + + I + I +L R LF+ +P L ++
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP-QKNLVSW 209
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI--GGSVHSLI 127
+ LI Y + E+ LF ++ +GL P++F ++AC +C GI G +H+ I
Sbjct: 210 SCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFI 269
Query: 128 FKVGLDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K+ SD + N L+ MY+ C ID A VF+E+ R+ V+W+S+I+ + A
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSA 329
Query: 187 LKVFHRMKLA----NESPNSVTLVSLVSACTSLIN--VRAGESIHSYAVVNGLELDVALG 240
K+F M++ N PN TL SLV+A SL + + E + + +G D+ +G
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVG 389
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
+ALV +++ G ++ A +F M ++N + ++ GLA +G A +F +M + ++
Sbjct: 390 SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVE 448
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDE----MARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+S S +LS + + EGK E + R + + +V+M G+ I+
Sbjct: 449 INSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID 508
Query: 357 EAYHIIRNMPTE 368
A + + MP++
Sbjct: 509 NACSVFQLMPSK 520
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 16/274 (5%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H ++K G D + NTL+ +Y + A+ +F+EMP +++VSWS +I+G+
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSL--INVRAGESIHSYAVVNGLELDVALG 240
P +A +F + + PN + S + AC ++ G IH++ D+ L
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 241 TALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM----I 295
L+ MYS C G ++ A +VF+ ++ +N +W +IS G A LF+ M +
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 296 QTGLKPDSISF-SAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHY--GCMVDMLGR 351
+ L+P+ + S + +ACS L D G ++M R+ + Y +V+ R
Sbjct: 342 ELNLRPNEYTLCSLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFL-GACRNH 384
GL++ A I + M + NAV + + G R H
Sbjct: 399 YGLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQH 431
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 239/386 (61%), Gaps = 1/386 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P LF +NT+IR Y+ + I +I L+ +M G+ P+++T+ FV+ AC + L + G +
Sbjct: 30 PNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQEL 89
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS I K GLD + + N L+++YAAC +D A +F+EMP D SWS+M++G+
Sbjct: 90 HSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQA 149
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ LK+ M+ N S ++ TL S+V C L + G+ +HSY G+++DV LGTAL
Sbjct: 150 VETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTAL 209
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V MYSKCG ++ A KVF M E+++ +W+IMI+G A +G A+ LF M ++ + P+
Sbjct: 210 VGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNC 269
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F+++LSA SH GLV++G F+ M Y I P ++HYGCMVD+ RAG++ A+ I+
Sbjct: 270 VTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQ 329
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP EPN V+ R+ LGAC+ HG L +++ + +LKL+P NYV ++V + G W
Sbjct: 330 TMPIEPNVVLWRTLLGACKTHG-YKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWS 388
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
+ ++ + +K K G S +++N
Sbjct: 389 SVCQVRSLMKEKAPKKQHGWSSIEIN 414
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
GHV A +F+ NL W +I G + + AI+L+ M G+ P+S +F +L
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+AC L + EG+ ++ + + ++ + G ++ A + MP EP+
Sbjct: 75 NACCKLLRLCEGQELHSQIVKA-GLDFETPLLNGLIKLYAACGCMDYACVMFDEMP-EPD 132
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-LGANYVLAASVSSLSGN 421
+ + + +GQ + + L KLL +++ E + ++ ASV + G+
Sbjct: 133 SASWSTMVSGYSQNGQAV---ETL-KLLREMQAENVSSDAFTLASVVGVCGD 180
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 267/476 (56%), Gaps = 45/476 (9%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL----PVTPPLFAYNTLIR 74
L ++H +K SL ++ ++++ + + H+ + + NL P F YN +IR
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMV----DVCNHYGETEYANLLFKGVADPNAFLYNAMIR 85
Query: 75 AYAKTSCSIESIKLFDEML-----KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
AY + +I ++ +ML + + PD FT+PFVVK+C + +G VH +FK
Sbjct: 86 AYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFK 145
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP------ 183
G S+ + N+L+ MY C +D A VFEEM RD VSW+++I+G V
Sbjct: 146 FGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAI 205
Query: 184 -------------------------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
+DAL+ F RM++ P+ ++LVS++ C L +
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGAL 265
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ IH YA G ++ + AL+EMY+KCG +++ ++F+ M+E+++ SW+ MI GL
Sbjct: 266 ELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGL 325
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A++GR AI LF +M + ++P I+F +L+AC+H GL++EG YF+ M R YNI+P
Sbjct: 326 ANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPG 385
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHYGC+V++LG +G +++A +++ MP +P++ I S L +CR+HG L + + L
Sbjct: 386 VEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGN-LKIAVIAMEHL 444
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
L+LEP NYVL +++ + G WD + + + K + K PGCS ++V++ E
Sbjct: 445 LELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQE 500
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 263/461 (57%), Gaps = 21/461 (4%)
Query: 6 IETLIQLSKT-----VHHLHQLHTLFLKTSLDHNTCIISR---FILTSLS--ISLHFTRS 55
+E I L +T + L Q+H ++ + + + + F L SL + +
Sbjct: 15 VEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHK 74
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRC 114
+F+ + +F +NTLIR YA+ SI + L+ EM +GL PD TYPF++KA
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G ++HS++ + G S Y+ N+LL +YA C ++ A VF++MP +D+V+W+S+I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF P +AL ++ M P+ T+VSL+SAC + + G+ +H Y + GL
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++ L+++Y++CG VE+A +F+ M +KN SWT +I GLA NG G AI LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 295 IQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
T GL P I+F IL ACSH G+V EG YF M Y I+P +EH+GCMVD+L RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+++AY I++MP +PN VI R+ LGAC HG D +L + +L+LEP +Y
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG-----DSDLAEFARIQILQLEPNHSGDY 429
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + W ++ + + G+ KVPG S V+V +
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 246/399 (61%), Gaps = 4/399 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + L ++N++I Y+K + E++ LF EM++ G +P+ + V+ ACG
Sbjct: 181 ARKVFDEIS-QKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G V + + + + ++G+ L+ MY C ++ A+ +F+ M +D V+W++
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ +A+K+F M++++ +P+ +TL+ ++SAC S+ + G+ + YA G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ DV +GTALV+MY+KCG ++ AF+VF M +KN SW MIS LA +G+ A++LF
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFK 419
Query: 293 KMIQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
M+ G + P+ I+F +LSAC H GLVDEG+ F M+ + + P +EHY CMVD+
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG +EEA+ + MP +P+ VIL + LGAC+ + + + + KLLL+LEP NYV
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNI-DISERVMKLLLELEPSNSGNYV 538
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + WD +A + + + QKG++K PGCSW+ +N
Sbjct: 539 ISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 207/389 (53%), Gaps = 13/389 (3%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
+S +L+Q ++ L Q+H L S+ + + + L + F+N+
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFL--YKIADLK-DFAYASVFFSNI- 86
Query: 62 VTPPLFAYNTLIR----AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ P +++N +IR A+ K+S ++E + M GL+P+N TYPF+ AC L +
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALE---FYSRMKFLGLKPNNLTYPFLFIACSNLLAV 143
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G H + + GLD D ++ ++L+ MYA C ++ A+ VF+E+ +D+VSW+SMI+G+
Sbjct: 144 ENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGY 203
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+A+ +F M A PN ++LVS++ AC L +++ G + + V N + L+
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G+AL+ MY KCG + A ++F+ M++K+ +W MI+G A NG AI LF M +
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
PD I+ ILSAC+ +G +D GK + A + + +VDM + G ++
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDN 382
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
A+ + MP + N V + + A HGQ
Sbjct: 383 AFRVFYGMPKK-NEVSWNAMISALAFHGQ 410
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 285/525 (54%), Gaps = 76/525 (14%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLF-LKTSLDHNTCIISRFILTSLSISLHFTRS--LFNN 59
R L + +++ + Q+H L L+ L + + +++++ + +F+
Sbjct: 8 QRRQPPLWRRCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQ 67
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNFTYPFVVKACGRCL 115
+P P LF YNTLIR A T+ +++ L+ M + G +RPD T+PFV++AC
Sbjct: 68 IP-RPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMG 126
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA------------------ 157
G G VH+ + K G +SD ++ N L+ M+A+C E+ VA A
Sbjct: 127 AGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMIT 186
Query: 158 -------------VFEEMPVRD-------------------------------VVSWSSM 173
+F+E PV+D VVSW++M
Sbjct: 187 GCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAM 246
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G V C S A+++F +M+ + P+ VT++SL+SAC ++ G +HS L
Sbjct: 247 ISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFL 306
Query: 234 E--LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
V LG AL++MY+KCG ++ A +VF +MR+K++ +W +I GLA +G +I +F
Sbjct: 307 RTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVF 366
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
KM++ ++PD I+F A+L ACSH G+VD+G+ YF+ M Y I+P ++HYGCMVDMLGR
Sbjct: 367 KKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGR 426
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
AGL++EA+ I M EPN+VI R+ LGACR HG++ L ++ + LLK + +YVL
Sbjct: 427 AGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEI-ELAEHANRQLLKARNDESGDYVL 485
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+++ + +G W + ++ ++ G+NK G + V DGSA+++
Sbjct: 486 LSNIYASAGEWSESEKMRKLMDDSGVNKQAGRT---VVDGSAKDL 527
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 259/443 (58%), Gaps = 17/443 (3%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
L QLH +K+ L + +++R + + L + R +F+ +P + YNTL+
Sbjct: 35 LAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIPTPGDVVWYNTLL 94
Query: 74 RAYAKTS-CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
R YA++S + E+ ++ ML+ G+ PD +T+ ++KAC G H + K G
Sbjct: 95 RGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGA 154
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD-VVSWSSMIAGFVACDSPSDALKVFH 191
+Y+ TL+ MYA C + A+A+F +P D VVS+++MI V P +AL +F
Sbjct: 155 ADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFR 214
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+ P SVT+ S++SAC L + G IH Y GL+ V + TAL++MY KCG
Sbjct: 215 EMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCG 274
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E A VF M ++ Q+W++MI A++ G AISLF +M + G++PD+++F +L
Sbjct: 275 SLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLY 334
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G+V EG YFD M R Y I P ++HYGC+ D+L R+G +E+AY I +P +P A
Sbjct: 335 ACSHSGMVSEGLQYFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTA 393
Query: 372 VILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
++ R+ L AC +HG V +LGK +L+L+ G++YV+ +++ + +G W+
Sbjct: 394 ILWRTLLSACGSHGAV-----DLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNR 448
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ +N+KG+ KVPGCS +++++
Sbjct: 449 VRKLMNEKGVVKVPGCSSIEIDN 471
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG----HVEKAFKVFNLMREKN 267
CTSL RA +H+ AV +GL AL T L+ + +K G H+ A +VF+ +
Sbjct: 29 CTSL---RALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIPTPG 85
Query: 268 LQSW-TIMISGLADNGRGNY-AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
W ++ G A + G A + A+M++ G+ PD+ +F ++L AC+ +EG+
Sbjct: 86 DVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQ 144
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 261/453 (57%), Gaps = 7/453 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLP 61
+ I +L+Q S+ ++ + +H ++ + ++ + + S ++ + +F
Sbjct: 39 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-YT 97
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ Y LI + + +E+I+L+ ML + PDN+ ++KACG L + G
Sbjct: 98 HNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGR 157
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----VRDVVSWSSMIAGF 177
VHS K+G S++ + ++ +Y C E+ A+ VFEEMP +D V W++MI GF
Sbjct: 158 EVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGF 217
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
V + + AL+ F M+ N PN T+V ++SAC+ L + G +HSY +EL++
Sbjct: 218 VRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNL 277
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G AL+ MYS+CG +++A VF+ M+++++ ++ MISGL+ NG+ AI LF M+
Sbjct: 278 FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGR 337
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
L+P +++F +L+ACSH GLVD G F MAR Y ++P +EHYGCMVD+LGR G +EE
Sbjct: 338 RLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEE 397
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
AY +IR M P+ ++L + L AC+ H + L L + + K L YVL + V +
Sbjct: 398 AYDLIRTMKMTPDHIMLGTLLSACKMH-KNLELGEQVAKELEDRGQADSGTYVLLSHVYA 456
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
SG W AA++ + + G+ K PGCS ++VN+
Sbjct: 457 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 489
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 245/399 (61%), Gaps = 4/399 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + L ++N++I Y+K + E++ LF EM++ G +P+ + V+ ACG
Sbjct: 181 ARKVFDEIS-QKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G V + + + + ++G+ L+ MY C ++ A+ +F+ M +D V+W++
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ +A+K+F M++++ +P+ +TL+ ++SAC S+ + G+ + YA G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ DV +GTALV+MY+KCG ++ AF+VF M KN SW MIS LA +G+ A++LF
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFK 419
Query: 293 KMIQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
M+ G + P+ I+F +LSAC H GLVDEG+ F M+ + + P +EHY CMVD+
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG +EEA+ + MP +P+ VIL + LGAC+ + + + + KLLL+LEP NYV
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNI-DISERVMKLLLELEPSNSGNYV 538
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + WD +A + + + QKG++K PGCSW+ +N
Sbjct: 539 ISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 207/389 (53%), Gaps = 13/389 (3%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
+S +L+Q ++ L Q+H L S+ + + + L + F+N+
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFL--YKIADLK-DFAYASVFFSNI- 86
Query: 62 VTPPLFAYNTLIR----AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ P +++N +IR A+ K+S ++E + M GL+P+N TYPF+ AC L +
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALE---FYSRMKFLGLKPNNLTYPFLFIACSNLLAV 143
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G H + + GLD D ++ ++L+ MYA C ++ A+ VF+E+ +D+VSW+SMI+G+
Sbjct: 144 ENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGY 203
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+A+ +F M A PN ++LVS++ AC L +++ G + + V N + L+
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G+AL+ MY KCG + A ++F+ M++K+ +W MI+G A NG AI LF M +
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
PD I+ ILSAC+ +G +D GK + A + + +VDM + G ++
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQ-VEIYASERGFQDDVYVGTALVDMYAKCGSLDN 382
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
A+ + MP + N V + + A HGQ
Sbjct: 383 AFRVFYGMPNK-NEVSWNAMISALAFHGQ 410
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 260/446 (58%), Gaps = 6/446 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTP 64
+L++ K++ Q+H LK L +++ S + + S S+ + S+F+ + P
Sbjct: 36 SLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIE-EP 94
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F YNT+IR + E++ L+ EML+ G+ PDNFTYPFV+KAC + + G +H
Sbjct: 95 GSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ +FK GL+ D ++ N L+ MY C I+ A VFE+M + V SWSS+I + +
Sbjct: 155 AHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWH 214
Query: 185 DALKVFHRMK-LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ L + M LVS +SACT L + G IH + N EL+V + T+L
Sbjct: 215 ECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY KCG +EK VF M KN S+T+MI+GLA +GRG A+ +F+ M++ GL PD
Sbjct: 275 IDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDD 334
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ + +LSACSH GLV+EG F+ M + IKPT++HYGCMVD++GRAG+++EAY +I+
Sbjct: 335 VVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIK 394
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP +PN V+ RS L AC+ H L + + + + +L +Y++ A++ + + W
Sbjct: 395 SMPIKPNDVVWRSLLSACKVHHN-LEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWA 453
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
A + + +K L + PG S V+ N
Sbjct: 454 NVARIRTEMAEKHLVQTPGFSLVEAN 479
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 261/453 (57%), Gaps = 7/453 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLP 61
+ I +L+Q SK ++ + +H ++ + ++ + + S ++ + +F
Sbjct: 32 QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-YT 90
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ Y LI + + ++I+L+ ML + PDN+ ++KACG L + G
Sbjct: 91 HNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGR 150
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----VRDVVSWSSMIAGF 177
VHS K+GL S++ + ++ +Y C E+ A+ VFEEMP +D V W++MI GF
Sbjct: 151 EVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGF 210
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
V + + AL+ F M+ N PN T+V ++SAC+ L + G +HSY +EL++
Sbjct: 211 VRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNL 270
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G AL+ MYS+CG +++A VF+ M+++++ ++ MISGL+ NG+ AI LF MI
Sbjct: 271 FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGR 330
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
L+P +++F +L+ACSH GLVD G F M R Y ++P +EHYGCMVD+LGR G +EE
Sbjct: 331 RLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEE 390
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
AY +IR M P+ ++L + L AC+ H + L L + + K+L YVL + V +
Sbjct: 391 AYDLIRTMKMTPDHIMLGTLLSACKMH-KNLELGEQVAKVLEDRGQADSGTYVLLSHVYA 449
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
SG W AA++ + + G+ K PGCS ++VN+
Sbjct: 450 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 482
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 257/432 (59%), Gaps = 6/432 (1%)
Query: 23 HTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H+L K +L + I + S + F R +F+ +P L ++N++I YAK C
Sbjct: 139 HSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIP-RRDLVSWNSMIAGYAKAGC 197
Query: 82 SIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E++++F EM + G PD + V+ ACG + +G V + + G+ + YIG+
Sbjct: 198 AREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGS 257
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MYA C ++ A+ +F+ M RDV++W+++I+G+ +A+ +FH MK +
Sbjct: 258 ALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTE 317
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +TL +++SAC ++ + G+ I YA G + D+ + TAL++MY+KCG + A +VF
Sbjct: 318 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVF 377
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT--GLKPDSISFSAILSACSHLGL 318
M +KN SW MIS LA +G+ A+SLF M G +P+ I+F +LSAC H GL
Sbjct: 378 KEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGL 437
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+EG FD M+ ++ + P +EHY CMVD+L RAG + EA+ +I MP +P+ V L + L
Sbjct: 438 VNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALL 497
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
GACR+ V + + + +++L+++P NY++++ + + W+ +A + + + QKG+
Sbjct: 498 GACRSKKNV-DIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGIT 556
Query: 439 KVPGCSWVKVND 450
K PGCSW++V +
Sbjct: 557 KTPGCSWIEVEN 568
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 209/377 (55%), Gaps = 10/377 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDH-NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
SKT+ +H + +K+S+ N ++S+ I + + LF+++ P +A+N
Sbjct: 31 SKTLQQVHA--QMVVKSSIHSPNNHLLSKAIHLK---NFTYASLLFSHIAPHPNDYAFNI 85
Query: 72 LIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+IRA T ++ LF M+ L P+NFT+PF +C ++ + HSL+FK+
Sbjct: 86 MIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKL 145
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
L SD + ++L+ MY+ C + A+ VF+E+P RD+VSW+SMIAG+ +A++VF
Sbjct: 146 ALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVF 205
Query: 191 HRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
M + P+ ++LVS++ AC L ++ G + + V G+ L+ +G+AL+ MY+K
Sbjct: 206 GEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK 265
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG + A ++F+ M +++ +W +ISG A NG + AISLF M + + + I+ +A+
Sbjct: 266 CGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAV 325
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
LSAC+ +G +D GK DE A + + ++DM + G + A + + MP +
Sbjct: 326 LSACATIGALDLGKQ-IDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP-QK 383
Query: 370 NAVILRSFLGACRNHGQ 386
N + + A +HG+
Sbjct: 384 NEASWNAMISALASHGK 400
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 260/464 (56%), Gaps = 15/464 (3%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL--P 61
+H L+ S T L Q LK+ L N+ +++R S S + L L P
Sbjct: 23 QHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAPALLDPLVTALLRP 82
Query: 62 VTP-PLFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
P F NTLIRA+A + S + + F ML+ + P+ FT+PF++KAC L
Sbjct: 83 SVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACA--ALP 140
Query: 118 G---IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE--IDVAKAVFEEMPVRDVVSWSS 172
G +G H+ K G +D+Y+ NTL+ MY+ + A+ VF+ MP V+WS+
Sbjct: 141 GSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSA 200
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+V SDA+ +F M+ + VT++ +++A T L + + + G
Sbjct: 201 MIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ V L AL++ +KCG V+ A VF M+++++ SWT +I LA GRG A+ +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G+ PD ++F +L+ACSH G+VDEG YFD M Y I+P +EHYGCMVDM GRA
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G++E A +R MP +PN VI RS + ACR HG+ L L +++ + LL P ANY++
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGR-LELGESITRSLLHEYPAHEANYIML 439
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
++V +L+ W +E+ ++++G+ KVPGCS V++ DG E
Sbjct: 440 SNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVEL-DGEVHEF 482
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 261/464 (56%), Gaps = 15/464 (3%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL--P 61
+H L+ S T L Q LK+ L N+ +++R S S + L L P
Sbjct: 23 QHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAPALLDPLVAALLRP 82
Query: 62 VTP-PLFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
P F NTLIRA+A + S + + F ML+ + P+ FT+PF++KAC L
Sbjct: 83 SVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACA--ALP 140
Query: 118 G---IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE--IDVAKAVFEEMPVRDVVSWSS 172
G +G H+ K G +D+Y+ NTL+ MY+ + A+ VF+ MP V+WS+
Sbjct: 141 GSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSA 200
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+V SDA+++F M+ + VT++ +++A T L + + + G
Sbjct: 201 MIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ V L AL++ +KCG V+ A VF M+++++ SWT +I LA GRG A+ +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G+ PD ++F +L+ACSH G+VDEG YFD M Y I+P +EHYGCMVDM GRA
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G++E A +R MP +PN VI RS + ACR HG+ L L +++ + LL P ANY++
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGR-LELGESITRSLLHEYPAHEANYIML 439
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
++V +L+ W +E+ ++++G+ KVPGCS V++ DG E
Sbjct: 440 SNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVEL-DGEVHEF 482
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 232/381 (60%), Gaps = 1/381 (0%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IR Y + + S+ +F M K + PD+ T+P V+KA + G+G +H ++ +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G D Y L+ +Y C I A +F+EMP R+ V+W+++I G+ A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M P+ T+V ++SAC+ L G+ IH + N L L+V +GTAL++MY+K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG V + KVF +REKN+ +W ++ISG A NG+G+ A+ F++M+ KPD ++F +
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L AC H GLV EG+ F M + + ++P +EHYGCMVD+LGRAGL+EEA +I++M EP
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
+ +I R+ L ACR HG L + + K L++LEP G NYVL +++ S W +L
Sbjct: 358 DPIIWRALLCACRVHGNT-KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 430 VAINQKGLNKVPGCSWVKVND 450
+N +G+ KVPGCS +++N+
Sbjct: 417 GMMNLRGIRKVPGCSSIEINN 437
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 14/289 (4%)
Query: 25 LFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE 84
++ T+L H C T LSIS LF+ +P + +N LI Y ++
Sbjct: 124 VYTSTALVHLYC-------TCLSISD--ASQLFDEMPERNAV-TWNALITGYTHNRKFVK 173
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
+I F ML G +P T V+ AC G +H I+ L + ++G L+
Sbjct: 174 AIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALID 233
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MYA C + + VFEE+ ++V +W+ +I+G+ AL+ F RM + N P+ VT
Sbjct: 234 MYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVT 293
Query: 205 LVSLVSACTSLINVRAGE-SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
+ ++ AC V G S GL+ + +V++ + G +E+A ++ M
Sbjct: 294 FLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSM 353
Query: 264 R-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
E + W ++ +G + ++I+ L+P++ +LS
Sbjct: 354 SIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNNGENYVLLS 400
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 280/501 (55%), Gaps = 52/501 (10%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNT---CIISR---FILTSLSISLHFTRSLFNN 59
+ TLI+ K + + +HT LK+ + H + +R F S S ++ ++F+
Sbjct: 22 LSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHM 81
Query: 60 LPVTPPLFAYNTLIRAYA------KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ P L YN +IR+Y ++C +++ L+ +ML G+ P+N T+PF+VK C R
Sbjct: 82 IKY-PELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSR 140
Query: 114 CLLIG-IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G +G +H+ + K G +D ++GN+L+ ++ A+ VF+EM VRDVVSW+S
Sbjct: 141 LQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNS 200
Query: 173 MIAGF-------------------------------VACDSPSDALKVFHRMKLANES-- 199
M+ G+ V ++L++FH M+ +
Sbjct: 201 MVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDV 260
Query: 200 --PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ +T+ S++SAC L ++ G+ +H+Y N +E DV +GTALV MY KCG V++A
Sbjct: 261 VKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAI 320
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
++FN M EK+ +WT MIS A +G G A F +M + G+KP+ ++F +LSACSH G
Sbjct: 321 EIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSG 380
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G+ FD M RVY+I+P + HY CMVD+L RA L +EA +IR+MP +P+ + +
Sbjct: 381 LVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGAL 440
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
LG C+ HG + L + + L+ LEP A Y+ + +G +D A + ++ ++G+
Sbjct: 441 LGGCQMHGNI-KLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGI 499
Query: 438 N-KVPGCSWVKVNDGSAEEMS 457
K+PGCS +++N G +E S
Sbjct: 500 ETKIPGCSIIEIN-GVVQEFS 519
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 246/398 (61%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P+ + ++N +I YA+T + E+++LF EM+KT +RPD T VV AC +
Sbjct: 189 QKMFDEIPIKD-VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 247
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ +Y C E++ A +FE + +DV+SW+++
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTL 307
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK 367
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ + T+L++MY+KCG +E A +VF+ + ++L SW MI G A +GR N A +F
Sbjct: 368 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIF 427
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + ++PD I+F +LSACSH G++D G++ F M Y I P +EHYGCM+D+LG
Sbjct: 428 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGH 487
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ + V L ++ + L+K+EP+ +YVL
Sbjct: 488 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANV-ELGESYAQNLIKIEPKNPGSYVL 546
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A++ +N KG+ KVPGCS ++++
Sbjct: 547 LSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 584
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 198/393 (50%), Gaps = 41/393 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVT 63
+L+ KT+ L +H +KT L + +S+ I L+ L + S+F +
Sbjct: 7 SLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ-E 65
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P L +NT+ R +A +S + ++ L+ M+ GL P+ +T+PF++K+C + G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV------------------------- 158
H + K+G D D Y+ +L+ MY ++ A+ V
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185
Query: 159 ------FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
F+E+P++DVVSW++MI+G+ + +AL++F M N P+ T+VS+VSAC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++ G +HS+ +G ++ + AL+++Y KCG VE A +F + K++ SW
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEM 329
+I G A+ LF +M+++G P+ ++ +IL AC+HLG ++ G+ Y ++
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK- 364
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
R+ + H ++DM + G IE A +
Sbjct: 365 -RLKGVANASSHRTSLIDMYAKCGDIEAAQQVF 396
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 259/450 (57%), Gaps = 34/450 (7%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L QLH LKT+ ++ +SR + + + S + + +F L + + +NT +R++A
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASE-VTHWNTCLRSFA 89
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ ++I LF + + + PD++T FV+KAC R L + G VH + K+GL S+ +
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMF 149
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----------------------------- 168
+ N ++ +YA C EI VA+ VF++MP RDV+
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209
Query: 169 --SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
SW+SMI G+ C +A+ +F M+ A PN VT+V+++ AC + N+ G IH
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
++ +G E ++ + L++MY KCG +E A ++F+ M E+ + SW+ MI+GLA +GR
Sbjct: 270 FSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAED 329
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A++LF KMI TG+KP++++F IL ACSH+G+V++G+ YF M R Y I P +EHYGCMV
Sbjct: 330 ALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+ RAGL++EA+ I NMP PN V+ + LG C+ H V L + + L KL+P
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNV-KLAEEATRHLSKLDPLND 448
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKG 436
YV+ +++ + +G W+ A + + +G
Sbjct: 449 GYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 244/396 (61%), Gaps = 4/396 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +PV + ++N I YA+T E+++LF +M+KT +RPD T V+ AC +
Sbjct: 191 MFDEIPVKD-VVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSG 249
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
I +G VHS I G + I N L+ +Y+ C E++ A +F+ + +DV+SW+++I
Sbjct: 250 SIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIG 309
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVNGL 233
G+ + +AL +F M + E PN VT++S++SAC L + G IH Y + G+
Sbjct: 310 GYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGV 369
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L T+L++MY+KCG +E A +VF+ M ++L SW MI G A +GR N A +F++
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSR 429
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G++PD I+F +LSACSH G++D G++ F M R Y + P +EHYGCM+D+ G +G
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSG 489
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE +YVL +
Sbjct: 490 LFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNV-ELGESYAQNLIKIEPENPGSYVLLS 548
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++ + + W+ A+ +N KG+ KVPGCS ++++
Sbjct: 549 NIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEID 584
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 43/397 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPV 62
+L+ KT+ L +H +KT L HNT +L +S HF S+F+ +
Sbjct: 7 SLLHXCKTLQSLRIIHAQMIKTGL-HNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ- 64
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P L +NT+ R +A +S + ++KL+ M+ GL P+++T+PF++K+C + G
Sbjct: 65 EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKE 151
+H + K G D D YI +L+ MY A+
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I+ A +F+E+PV+DVVSW++ I+G+ + +AL++F +M N P+ T+V+++SA
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C ++ G +HS+ +G ++ + AL+++YSKCG +E A +F + K++ SW
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDE 328
+I G A+ LF M+++G KP+ ++ +ILSAC+HLG +D G+ Y D+
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + ++DM + G IE A + +M
Sbjct: 365 --RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/493 (35%), Positives = 267/493 (54%), Gaps = 58/493 (11%)
Query: 10 IQLSKTVHHLHQLHTL---------FLKTSLDHNTCIISR---FILTSLSISLHFTRSLF 57
I LS HLH H L + T +T SR F S I L ++ +F
Sbjct: 27 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 86
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + + F +NT++RAY +++ + +++ L+ M+K + PDN+TYP VV+AC LL
Sbjct: 87 DRIENSNG-FMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 145
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G +H + KVG DSD Y+ NTL+ MYA C + A+ +F+E PV D VSW+S++AG+
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 205
Query: 178 VACDSPSDALKVFHRMKLANESP------------------------------------- 200
V D +V KL NE
Sbjct: 206 V---KKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 262
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS----KCGHVEKA 256
+ V +VS++SAC L V+ G+ IH + G+E V L AL+ MYS KCG VE A
Sbjct: 263 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENA 322
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VFN M EK + SW +I GLA NG ++ +F++M G+ P+ I+F +L AC H+
Sbjct: 323 LEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHM 382
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLVDEG+ +F M + I+P ++HYGCMVD+LGRAGL+ EA +I +MP P+ +
Sbjct: 383 GLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGA 442
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGAC+ HG + + +G+ L++L+P+ +VL +++ + G+W+ E+ + Q+G
Sbjct: 443 LLGACKKHGDT-EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 501
Query: 437 LNKVPGCSWVKVN 449
+ K PGCS ++ N
Sbjct: 502 VVKTPGCSLIEAN 514
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/433 (37%), Positives = 251/433 (57%), Gaps = 3/433 (0%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+LI + L +F K+SL + +L L R LF +PV +
Sbjct: 172 SLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAV- 230
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I YA++ E++ F EM + + P+ T V+ AC + + +G V S I
Sbjct: 231 SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI 290
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
GL S+ + N L+ MY+ C ++D A+ +FE + +D++SW+ MI G+ +S +AL
Sbjct: 291 EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEAL 350
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-DVALGTALVEM 246
+F +M+ +N PN VT VS++ AC L + G+ IH+Y L L + +L T+L++M
Sbjct: 351 ALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDM 410
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG++E A +VF M+ K+L SW MISGLA +G N A+ LF +M G +PD I+F
Sbjct: 411 YAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITF 470
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GLV+ G+ F M Y+I P ++HYGCM+D+LGRAGL +EA +++NM
Sbjct: 471 VGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME 530
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+P+ I S LGACR HG V L + K L +LEPE YVL +++ + +G WD A
Sbjct: 531 MKPDGAIWGSLLGACRVHGNV-ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVA 589
Query: 427 ELMVAINQKGLNK 439
+ +N KG+ K
Sbjct: 590 RIRTKLNDKGMKK 602
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 209/393 (53%), Gaps = 37/393 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNNLPVT 63
TL+ K+ +L Q+H+ +KT L HNT ++ +IS L + LF ++
Sbjct: 37 TLLSTCKSFQNLKQIHSQIIKTGL-HNTQFALSKLIEFCAISPFGNLSYALLLFESIE-Q 94
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +NT+IR + +S + +I + ML G+ P+++T+PF++K+C + G +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------I 152
H + K+GL+SD ++ +L+ MYA E +
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
D A+ +FEE+PVRD VSW++MIAG+ +AL F MK AN +PN T+V+++SAC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++ G + S+ +GL ++ L AL++MYSKCG ++KA +F + EK++ SW
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+MI G + A++LF KM Q+ ++P+ ++F +IL AC++LG +D GK + +
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ + ++DM + G IE A + M
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 263/461 (57%), Gaps = 21/461 (4%)
Query: 6 IETLIQLSKT-----VHHLHQLHTLFLKTSLDHNTCIISR---FILTSLS--ISLHFTRS 55
+E I L +T + L Q+H ++ + + + + F L SL + +
Sbjct: 15 VEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHK 74
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRC 114
+F+ + +F +NTLIR YA+ SI + L+ EM +GL PD TYPF++KA
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G ++HS++ + G S Y+ N+LL +YA C ++ A VF++MP +D+V+W+S+I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF P +AL ++ M P+ T+VSL+SAC + + G+ +H Y + GL
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++ L+++Y++CG VE+A +F+ M +KN SWT +I GLA NG G AI LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 295 IQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
T GL P I+F IL ACSH G+V EG YF M Y I+P +EH+GCMVD+L RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+++AY I++MP +PN VI R+ LGAC HG D +L + +L+LEP +Y
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG-----DSDLAEFARIQILQLEPNHSGDY 429
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + W ++ + + G+ KVPG S V+V +
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 260/449 (57%), Gaps = 15/449 (3%)
Query: 21 QLHTLFLKTSL---DHNTCIISRFILTSLSIS--LHFTRSLFNNLPVTPPLFAYNTLIRA 75
QLH LK+ +H F ++LS S L++ R + L TP F YNT+IRA
Sbjct: 11 QLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLH-TPNSFYYNTMIRA 69
Query: 76 YAKTSCSIESIKLF------DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
Y+ ++ + LF D+ RPD+FTYPFV+KAC + G +H L+FK
Sbjct: 70 YSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIHGLVFK 129
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G+ SD+YI N L+ +Y+ E ++A VF++MP RDVVSW+S+I GFV D P +A+++
Sbjct: 130 SGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRL 189
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M PN VT+ S++ AC + GE IHS+ + + TAL++MY+K
Sbjct: 190 FTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAK 249
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG ++ A +VF+ EK++ WT +I+GLA +G AI F M ++ +K D + +A+
Sbjct: 250 CGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAV 309
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
LSA + GLV EG +F + + + IKPT++HYGC+VDML RAG +++A IR MP EP
Sbjct: 310 LSAYRNAGLVSEGLLFFRRLKK-HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEP 368
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKL-LLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+AV+ R+ + C+ G V + + +L LL ++ +YVL +V + +G W+ A+
Sbjct: 369 DAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYVLLENVYAATGKWEEKAKT 428
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
+ Q+GL K P CS +++ DG E +
Sbjct: 429 RELMYQRGLMKPPACSRIEI-DGVVHEFT 456
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 263/452 (58%), Gaps = 6/452 (1%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLF 67
+ L + + Q+H +KT + +S ++ S+ S+H + +F+ P L
Sbjct: 120 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECP-HRDLV 178
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ TLI+A+ K +++ F EM LR D T V+ AC + +G VHS I
Sbjct: 179 SWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYI 238
Query: 128 -FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ + +D ++GN LL MY C +++ A VF+EMPV++VV+W++MI+G +A
Sbjct: 239 RHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREA 298
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L F M+ P+ VTLV ++++C +L + G+ +H+Y N + D +G AL++M
Sbjct: 299 LDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDM 358
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG +++AF+VF M+ +++ S+T MI GLA +G N+A +F++M + G++P+ ++F
Sbjct: 359 YAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTF 418
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH GLV EGK YF +M+ Y ++P EHYGCM+D+LGRAGL++EA II M
Sbjct: 419 LGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKME 478
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+ + LGACR HG V + +++ + L +L+P+ Y+L ++ S W A
Sbjct: 479 IRPDVFACGALLGACRIHGNV-DIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDAL 537
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEMSK 458
++ + K + K PGCS ++V DG E K
Sbjct: 538 KIRKTMKNKKMRKTPGCSLIEV-DGVVHEFRK 568
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 195/360 (54%), Gaps = 9/360 (2%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI----SLHFTRSLF--NNLPVTPPLF 67
K++ HL Q+H + +KT +I + I S S L + RS+ ++ L
Sbjct: 17 KSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQFCLS 76
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
N +IR+ ++ S ++ ++ +EML GL PD FT P V+KA I G +H+
Sbjct: 77 LCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARS 136
Query: 128 FKVGLDS-DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G+ + Y+ NTL+R+Y+ C I + VF+E P RD+VSW+++I F S A
Sbjct: 137 IKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRA 196
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVE 245
++ F M + TLV ++SAC++L ++ G+ +HSY ++ DV +G AL++
Sbjct: 197 VEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLD 256
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KC + A+KVF+ M KN+ +W MISGLA GR A+ F M G+KPD ++
Sbjct: 257 MYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVT 316
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+L++C++LG+++ GK M R + + ++DM + G I+EA+ + +M
Sbjct: 317 LVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESM 375
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 278/484 (57%), Gaps = 39/484 (8%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFN 58
IS ++ +L+ K++ L QLH + + L + IS+ + ++LS S ++++ +F+
Sbjct: 13 ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
L +P +F++NT+IR Y+ + I+S+ +F +ML+ G+ PD TYPF+VKA R L
Sbjct: 73 QLS-SPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQE 131
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---------------------------- 150
G SVH+ I K G +SD++I N+L+ MYAAC
Sbjct: 132 TGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYA 191
Query: 151 ---EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
E+ +A+ FE M +DV SWSS+I G+V S+A+ +F +M+ A N VT+VS
Sbjct: 192 KCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVS 251
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--E 265
+ AC + + G I+ Y V NGL L + L T+LV+MY+KCG +E+A +F + +
Sbjct: 252 VSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQ 311
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
++ W +I GLA +G ++ LF +M G+ PD +++ +L+AC+H GLV E +
Sbjct: 312 TDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFF 371
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
F+ +++ + PT EHY CMVD+L RAG + AY I MPTEP A +L + L C NH
Sbjct: 372 FESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINH- 429
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
+ L L + +G+ L++LEP Y+ +++ ++ WD A + A+ ++G+ K PG S+
Sbjct: 430 RNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSF 489
Query: 446 VKVN 449
V+++
Sbjct: 490 VEIS 493
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 256/439 (58%), Gaps = 4/439 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
SK ++ QLH F + +N + ++ + L ++S SL R+LF+ +P LF +N
Sbjct: 60 SKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP-KQNLFLWNV 118
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIR YA +I L+ +ML GLRPDNFT PFV+KAC IG G S+H + K G
Sbjct: 119 LIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG 178
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+ D ++G L+ MYA C + A VF+++ VRD V W+SM+A + P +++ +
Sbjct: 179 WERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCR 238
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M P TLV+++S+ + + G IH + +G + + + TAL++MY+KCG
Sbjct: 239 EMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCG 298
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
V+ A +F +REK + SW +I+G A +G A+ LF KM + +PD I+F +L+
Sbjct: 299 SVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLA 357
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACS L+DEG+ ++ M R Y I PT++HY CM+D+LG G ++EAY +IRNM +P++
Sbjct: 358 ACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDS 417
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+ + L +C+ HG V + L K L++LEP+ NYV+ A++ + SG W+ +L
Sbjct: 418 GVWGALLNSCKIHGNVELAELALEK-LIELEPDDSGNYVILANMYAQSGKWEGVEKLRQV 476
Query: 432 INQKGLNKVPGCSWVKVND 450
+ K + K CSW++V +
Sbjct: 477 MIDKRIKKNIACSWIEVKN 495
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 155/305 (50%), Gaps = 4/305 (1%)
Query: 101 NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
++ Y ++++C + G +H+ + +G+ ++ + L+ +YA + A+ +F+
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
++P +++ W+ +I G+ A + P D A+ ++H+M P++ TL ++ AC++L +
Sbjct: 107 KIPKQNLFLWNVLIRGY-AWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIG 165
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G SIH Y + +G E D+ +G AL++MY+KCG V A +VF+ + ++ W M++ A
Sbjct: 166 EGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYA 225
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
NG + +ISL +M G++P + ++S+ + + + G+ R + +
Sbjct: 226 QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR-HGFQSND 284
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+ ++DM + G ++ A + + E V + + HG + D K+
Sbjct: 285 KVKTALIDMYAKCGSVKVALALFERL-REKRVVSWNAIITGYAMHGLAVGALDLFDKMRK 343
Query: 400 KLEPE 404
+ P+
Sbjct: 344 EDRPD 348
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 270/435 (62%), Gaps = 7/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
Q H L +K+ LD + C+ + + S+ R +F+ +PV + ++ +I Y
Sbjct: 166 QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV-HNVMSWTAIITGY 224
Query: 77 AKTS-CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ C E+I+LF EM++ ++P++FT+ V+KAC I +G V++L+ K+ L S
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASI 284
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN+L+ MY+ C ++ A+ F+ + +++VS+++++ + + +A ++F+ ++
Sbjct: 285 NCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG 344
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A N+ T SL+S +S+ + GE IHS + +G + ++ + AL+ MYS+CG++E
Sbjct: 345 AGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEA 404
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF+VFN M + N+ SWT MI+G A +G A+ F KM++ G+ P+ +++ A+LSACSH
Sbjct: 405 AFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSH 464
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GL+ EG +F M + I P MEHY C+VD+LGR+G +EEA ++ +MP + +A++LR
Sbjct: 465 VGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLR 524
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+FLGACR HG + L + +++L+ +P A Y+L +++ + +G W+ AE+ + ++
Sbjct: 525 TFLGACRVHGN-MDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKER 583
Query: 436 GLNKVPGCSWVKVND 450
L K GCSW++V +
Sbjct: 584 NLTKEAGCSWIEVEN 598
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 15/303 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +++ LI YA + E+I F +ML+ G P+ + + V +AC I +G +
Sbjct: 7 LVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFG 66
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ K G +SD +G L+ M+ +++ A VF+ MP R+VV+W+ MI F
Sbjct: 67 FLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS 126
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
DA+ +F M L+ P+ TL +VSAC + + G H + +GL+LDV +G +L
Sbjct: 127 RDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSL 186
Query: 244 VEMYSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY-AISLFAKMIQTGL 299
V+MY+KC G V+ A KVF+ M N+ SWT +I+G +G + AI LF +M+Q +
Sbjct: 187 VDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQV 246
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLI 355
KP+ +FS++L AC++L + + E +K + C ++ M R G +
Sbjct: 247 KPNHFTFSSVLKACANLSDI-----WLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 356 EEA 358
E A
Sbjct: 302 ENA 304
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 14/211 (6%)
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RD+VSWS++I+ + + +A+ F M PN + AC++ N+ G+ I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 225 HSYAVVNG-LELDVALGTALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+ + G E DV +G AL++M+ K G +E A+KVF+ M ++N+ +WT+MI+ G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME-- 340
A+ LF M+ +G PD + S ++SAC+ +GL+ G+ + +K ++
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF-----HCLVMKSGLDLD 179
Query: 341 -HYGC-MVDMLGRA---GLIEEAYHIIRNMP 366
GC +VDM + G +++A + MP
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+++L SW+ +IS A+N + AIS F M++ G P+ F+ + ACS+ + GK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 325 YFDEMARVYNIKPTMEHYGC-MVDMLGRA-GLIEEAYHIIRNMP 366
F + + + + GC ++DM + G +E AY + MP
Sbjct: 64 IFGFLLKTGYFESDV-CVGCALIDMFVKGNGDLESAYKVFDRMP 106
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 276/494 (55%), Gaps = 38/494 (7%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
+R+I +L K + L ++H +K SL + ++++ + + ++ + + LF L
Sbjct: 11 NRYITSLKNCFK-ITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQL- 68
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK---TGLRPDNFTYPFVVKACGRCLLIG 118
+ P +F YN +IR YA +I +F +ML + PD FT+PFV+K+C L
Sbjct: 69 LHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHR 128
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------ACK--------------------- 150
+G VH L++K G D N L+ MY ACK
Sbjct: 129 LGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYV 188
Query: 151 ---EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
+++ A+ +F++MPVR +VSW++MI G+ DAL VF M++ P+ +++++
Sbjct: 189 KLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIA 248
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++ AC L + G+ IH YA NG + AL+EMY+KCG +++A+ +F+ + EK+
Sbjct: 249 VLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKD 308
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ SW+ MI GLA++G+G AI LF +M + + P+ I+F +L ACSH GL DEG YFD
Sbjct: 309 VISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFD 368
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M+ Y+I+P +EHYGC++D+LGR+G + +A I MP +P++ I S L +CR H +
Sbjct: 369 VMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH-RN 427
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L + K L++LEPE NYVL A++ + G W+ + + I K + K PG S ++
Sbjct: 428 LQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIE 487
Query: 448 VNDGSAEEMSKETA 461
VN+ E +S + +
Sbjct: 488 VNNVVQEFVSSDDS 501
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 252/417 (60%), Gaps = 17/417 (4%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK-----TSCSIESIKLFDEMLKTG 96
+++S +LHF+ + F +NTLIRA+ + T + I +F M G
Sbjct: 7 LISSTHPTLHFSHPTLES-------FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG 59
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK 156
++PD T+PF++++ L+ +G SVH+ I + GL D ++ +L+ MY++ +D+A+
Sbjct: 60 VQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMAR 119
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA---NESPNSVTLVSLVSACT 213
+F MP R+V+SWS MI G+V C +AL +F M++ + PN T+ +++AC
Sbjct: 120 NLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACG 179
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWT 272
L + G+ H+Y G+ +DV LGTAL++MY+KCG VEKA VF NL K++ +W+
Sbjct: 180 RLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWS 239
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MISGLA +G + LF+KMI G++P++++F A+ AC H GLV EGK+Y M
Sbjct: 240 AMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTED 299
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y+I PT++HYGCMVD+ GRAG I+EA++++++MP EP+ ++ + L R HG + +
Sbjct: 300 YSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCEL 359
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L K L++LEP YVL ++V + G W+ + + G+ KVPGCS ++V
Sbjct: 360 ALKK-LIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVG 415
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 271/491 (55%), Gaps = 52/491 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL-----FNNLPV 62
+L+ T+ + Q+H + + +N +F+ T I+LH T +L N
Sbjct: 14 SLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVAT---IALHNTTNLDYANKLLNHNN 70
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG---LRPDNFTYPFVVKACGRCLLIGI 119
P LF N++IRAY+K+S +S + +L + L PDN+T+ F+V+ C +
Sbjct: 71 NPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVT 130
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------------------------A 148
G VH + K G + D ++ L+ MYA
Sbjct: 131 GLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAK 190
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
C +ID A+ +F+EMP RD V+W++MIAG+ C +AL VFH M++ N V++V +
Sbjct: 191 CGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLV 250
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+SACT L + G +H+Y + + V LGTALV+MY+KCG+V++A +VF M+E+N+
Sbjct: 251 LSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNV 310
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+W+ I GLA NG G ++ LF M + G++P+ I+F ++L CS +GLV+EG+ +FD
Sbjct: 311 YTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDS 370
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M VY I P +EHYG MVDM GRAG ++EA + I +MP P+ + L ACR +
Sbjct: 371 MRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACR-----M 425
Query: 389 YLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
Y + LG++ +++LE + YVL +++ + NW++ + L + KG+ K+PGCS
Sbjct: 426 YKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCS 485
Query: 445 WVKVNDGSAEE 455
++V DG E
Sbjct: 486 VIEV-DGEVHE 495
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 265/450 (58%), Gaps = 11/450 (2%)
Query: 13 SKTVHHLH---QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
++ H+ H LH+L +KT D + + + + L S + L R +F+ +P + +
Sbjct: 112 TRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVS 170
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +I Y ++ C E++ LF +L+ GLRPD+FT ++ AC R + G + +
Sbjct: 171 WTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMR 230
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ G + ++ +L+ MYA C ++ A+ VF+ M +DVV WS++I G+ + P +AL
Sbjct: 231 ESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALD 290
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL--DVALGTALVEM 246
VF M+ N P+ +V + SAC+ L + G + +++G E + LGTAL++
Sbjct: 291 VFFEMQRENVRPDCYAMVGVFSACSRLGALELGN--WARGLMDGDEFLSNPVLGTALIDF 348
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG V +A +VF MR K+ + +ISGLA G A +F +M++ G++PD +F
Sbjct: 349 YAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTF 408
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L C+H GLVD+G YF M+ V+++ PT+EHYGCMVD+ RAGL+ EA +IR+MP
Sbjct: 409 VGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMP 468
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
E N+++ + LG CR H L +++ K L++LEP +YVL +++ S S WD A
Sbjct: 469 MEANSIVWGALLGGCRLHKDT-QLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAE 527
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
++ ++NQKG+ K+PGCSWV+V DG E
Sbjct: 528 KIRSSLNQKGMQKLPGCSWVEV-DGVVHEF 556
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 201/369 (54%), Gaps = 14/369 (3%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTL 72
K++H Q H L L+ L +T +I+ + +SL + + +F P P +F YNTL
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTP-HPNIFLYNTL 72
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVG 131
IR +++ ++ M + G PDNFT+PFV+KAC R +G S+HSL+ K G
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
D D ++ L+ +Y+ + A+ VF+E+P ++VVSW+++I G++ +AL +F
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+ P+S TLV ++ AC+ + ++ +G I Y +G +V + T+LV+MY+KCG
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E+A +VF+ M EK++ W+ +I G A NG A+ +F +M + ++PD + + S
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFS 312
Query: 312 ACSHLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
ACS LG ++ G + D + N P + ++D + G + +A + + M +
Sbjct: 313 ACSRLGALELGNWARGLMDGDEFLSN--PVLGT--ALIDFYAKCGSVAQAKEVFKGMRRK 368
Query: 369 P----NAVI 373
NAVI
Sbjct: 369 DCVVFNAVI 377
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%)
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L ++ + H + GL D L L+ + A VF N+ +
Sbjct: 12 GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+I G+ N A+S++A M Q G PD+ +F +L AC+ L
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRL 114
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/457 (38%), Positives = 255/457 (55%), Gaps = 21/457 (4%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTP 64
+L+ +++ L Q+ + L +T ++S + SLS S L RS F + TP
Sbjct: 21 SLLNSCRSMDQLRQIQAQVHVSGLYQDTRVLSELVYFCSLSPSKNLRHARS-FVHHAATP 79
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
++N LIR YA + +E+ +F +M + G P+ T+PF++K+C + G VH
Sbjct: 80 SPISWNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVASALFEGKQVH 139
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K GLDSD Y+GN L+ Y CK+I A+ VF EMP R VVSW+S++ V
Sbjct: 140 ADAVKCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEMPERTVVSWNSVMTACVESLWLG 199
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
D + F RM P+ ++V L+SAC L + G +HS V+ G+ L V LGTALV
Sbjct: 200 DGIGYFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALV 259
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-----GL 299
+MY K G + A VF M +N+ +W+ MI GLA +G G A+ LFA M +
Sbjct: 260 DMYGKSGALGYARDVFERMENRNVWTWSAMILGLAQHGFGEEALELFAIMNNNNNDNRDI 319
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+P+ +++ +L ACSH G+VDEG YF +M V+ IKP M HYG MVD+LGRAG +EEAY
Sbjct: 320 RPNYVTYLGVLCACSHAGMVDEGYQYFHDMECVHGIKPLMTHYGAMVDVLGRAGRLEEAY 379
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG-------KLLLKLEPELGANYVLA 412
I++MP EP+ V+ R+ L AC H + D+ G KLLLK EP G N V+
Sbjct: 380 EFIQSMPIEPDPVVWRTLLSACTVHD----VHDHTGIGERVSKKLLLK-EPRRGGNLVIV 434
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ + G W+ AA + + G+ KV G S V +
Sbjct: 435 ANMYAEVGMWEEAANVRRVMRDGGMKKVAGESCVDLG 471
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 274/484 (56%), Gaps = 35/484 (7%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVT 63
H + +Q T L Q+H LK+ L + +++F+ LS S + +F N
Sbjct: 13 HNLSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDR 72
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +N +IR + + S+ L+ ML + +T+PF++KAC +
Sbjct: 73 PDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQI 132
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEI 152
H+ I K G D Y N+L+ YA E+
Sbjct: 133 HAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEM 192
Query: 153 DVAKAVFEEMPVRD-VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
D+A +F +MP ++ +SW++MI+G+V +AL++FH M+ +N P++V+L S +SA
Sbjct: 193 DMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSA 252
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L + G+ IHSYA +D L L++MY+KCG +E+A VF M+ K++Q W
Sbjct: 253 CSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVW 312
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
T +ISG A +G G AIS F +M G+KP++I+F+A+L+ACS+ GLV+EGK+ F+ + R
Sbjct: 313 TALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIER 372
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
YN+KPT+EHYGCMVD+LGRAGL+ EA I+ MP +PNAVI S L AC+ H + L
Sbjct: 373 DYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNI-ELG 431
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
+ +G++L++++ G YV A++ ++ WD AAE + ++G+ KVPGCS + + +G
Sbjct: 432 EKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISL-EG 490
Query: 452 SAEE 455
+ E
Sbjct: 491 TTHE 494
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 269/477 (56%), Gaps = 47/477 (9%)
Query: 27 LKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE- 84
L +LD + ++SRFI S+ + + SLF ++ P ++ YN +I+A + + +
Sbjct: 2 LLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKA 61
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
SI L++ + GLRPD++++PF +KA R I G +HS + GL SD ++ ++
Sbjct: 62 SIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQ 121
Query: 145 MYAA---------------------------------CKEIDV--AKAVFEEMPVRDVVS 169
MY++ K D+ A+ +FE MP R+V+S
Sbjct: 122 MYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVIS 181
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+++I G+ + P DA+ +F RM+L N P+ + ++ ++AC L + GE I Y
Sbjct: 182 WTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYID 241
Query: 230 VNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
GL ++ L AL++MY+K G ++ A +VF M K + +WT MI+GLA +G G A+
Sbjct: 242 RLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEAL 301
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F++M + +KP+ I+F AILSACSH+GLV G+ YF+ M Y I+P +EHYGCM+D+
Sbjct: 302 EMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDL 361
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
LGRAG ++EA ++ MP EPNAVI S L AC HG D LG+L LL+LEP+
Sbjct: 362 LGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHG-----DPELGELALQHLLELEPD 416
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
NY L +++ + G W+ + + + G+ K+PG S ++VN+ E ++ E +
Sbjct: 417 NSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEIS 473
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 257/439 (58%), Gaps = 3/439 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
S +H ++H+ K + + + I + S S+ R +F+ + V + ++
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTA 399
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I AK+ E++ ++ EM + G+ P+ TY ++ AC + G +H + + G
Sbjct: 400 MIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAG 459
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
L +D ++GNTL+ MY+ C + A+ VF+ M RD+V++++MI G+ A + +ALK+F
Sbjct: 460 LATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFD 519
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
R++ P+ VT +++++AC + ++ IH+ G D ++G ALV Y+KCG
Sbjct: 520 RLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCG 579
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
A VF M ++N+ SW +I G A +GRG A+ LF +M G+KPD ++F ++LS
Sbjct: 580 SFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLS 639
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH GL++EG+ YF M++ + I PT+EHYGCMVD+LGRAG ++EA +I+ MP + N
Sbjct: 640 ACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANT 699
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
I + LGACR HG V + + + LKL+ + YV + + + +G WD+AA+L
Sbjct: 700 RIWGALLGACRIHGNVP-VAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKL 758
Query: 432 INQKGLNKVPGCSWVKVND 450
+ Q+G+ K PG SW++V D
Sbjct: 759 MEQRGVTKEPGRSWIQVGD 777
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 3/333 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F L V L A+NT+I A+ E+ +++++M + G+ P+ TY ++ AC
Sbjct: 282 RQVFEKL-VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +HS + K G SD + N L+ MY+ C I A+ VF++M +DV+SW++M
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAM 400
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G ++AL V+ M+ A PN VT S+++AC+S + G IH V GL
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D +G LV MYS CG V+ A +VF+ M ++++ ++ MI G A + G A+ LF +
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + GLKPD +++ +L+AC++ G ++ + + R +V + G
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCG 579
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+A + M T+ N + + +G HG+
Sbjct: 580 SFSDASIVFEKM-TKRNVISWNAIIGGSAQHGR 611
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ + + ++ I YA S + ++F +M + G+ P+ TY V+
Sbjct: 176 SIEEAREVFDKME-KKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
A + G +VHS I G +SD +G L++MYA C + VFE++ RD++
Sbjct: 235 NAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI 294
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W++MI G +A +V+++M+ PN +T V L++AC + + G+ IHS
Sbjct: 295 AWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRV 354
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
G D+ + AL+ MYS+CG ++ A VF+ M K++ SWT MI GLA +G G A+
Sbjct: 355 AKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEAL 414
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVD 347
+++ +M Q G++P+ +++++IL+ACS ++ G+ ++ V T H G +V+
Sbjct: 415 TVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV--VEAGLATDAHVGNTLVN 472
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
M G +++A + M + + V + +G Y NLGK LKL
Sbjct: 473 MYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGG--------YAAHNLGKEALKL 517
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 205/445 (46%), Gaps = 64/445 (14%)
Query: 18 HLHQLHTLFLKTSLDHNT--CIISRFILTSLSISLHFTRSLFNNLP-VTPPLFAYNTLIR 74
+HQ H + +T D T +I+ +I S+ R ++ L + + ++N ++
Sbjct: 44 QVHQ-HIIQHRTVPDQYTVNALINMYIQCG---SIEEARQVWKKLSYMERTVHSWNAMVV 99
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + +++KL +M + GL PD T + +C + G +H + GL
Sbjct: 100 GYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLF 159
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D + N +L MYA C I+ A+ VF++M + VVSW+ I G+ C A ++F +M+
Sbjct: 160 DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
PN +T +S+++A +S ++ G+++HS + G E D A+GTALV+MY+KCG +
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYK 279
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC- 313
+VF + ++L +W MI GLA+ G A ++ +M + G+ P+ I++ +L+AC
Sbjct: 280 DCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACV 339
Query: 314 ----------------------------------SHLGLVDEGKNYFDEMARVYNIKPTM 339
S G + + + FD+M R I T
Sbjct: 340 NSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWT- 398
Query: 340 EHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGAC----------RNHGQ 386
M+ L ++G EA Y ++ EPN V S L AC R H Q
Sbjct: 399 ----AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQ 454
Query: 387 V----LYLDDNLGKLLLKLEPELGA 407
V L D ++G L+ + G+
Sbjct: 455 VVEAGLATDAHVGNTLVNMYSMCGS 479
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 35/334 (10%)
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
++ + + + G + ++ Y ++K C + G VH I + D+Y N L+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 145 MYAACKEIDVAKAVFEEMPV--RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
MY C I+ A+ V++++ R V SW++M+ G++ ALK+ +M+ +P+
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T++S +S+C S + G IH A+ GL DV + ++ MY+KCG +E+A +VF+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +K++ SWTI I G AD GR A +F KM Q G+ P+ I++ ++L+A S + G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 323 K----------------------------NYFDEMARVYN--IKPTMEHYGCMVDMLGRA 352
K + + +V+ + + + M+ L
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 353 GLIEEAYHIIRNMPTE---PNAVILRSFLGACRN 383
G EEA + M E PN + L AC N
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 232/381 (60%), Gaps = 1/381 (0%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IR Y + + S+ +F M K + PD+ T+P V+KA + G+G +H ++ +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G D Y L+ +Y C I A +F+EMP R+ V+W+++I G+ A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M P+ T+V ++SAC+ L G+ IH + N L L+V +GTAL++MY+K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG V + KVF +REKN+ +W ++ISG A NG+G+ A+ F++M+ KPD ++F +
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L AC H GLV EG+ F M + + ++P +EHYGCMVD+LGRAGL+EEA +I++M EP
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
+ +I R+ L ACR HG L + + K L++LEP G NYVL +++ S W +L
Sbjct: 358 DPIIWRALLCACRVHGNT-KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 430 VAINQKGLNKVPGCSWVKVND 450
++ +G+ KVPGCS +++N+
Sbjct: 417 GMMSLRGIRKVPGCSSIEINN 437
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 14/289 (4%)
Query: 25 LFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE 84
++ T+L H C T LSIS LF+ +P + +N LI Y ++
Sbjct: 124 VYTSTALVHLYC-------TCLSISD--ASQLFDEMPERNAV-TWNALITGYTHNRKFVK 173
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
+I F ML G +P T V+ AC G +H I+ L + ++G L+
Sbjct: 174 AIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALID 233
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MYA C + + VFEE+ ++V +W+ +I+G+ AL+ F RM + N P+ VT
Sbjct: 234 MYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVT 293
Query: 205 LVSLVSACTSLINVRAGE-SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
+ ++ AC V G S GL+ + +V++ + G +E+A ++ M
Sbjct: 294 FLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSM 353
Query: 264 R-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
E + W ++ +G + ++I+ L+P++ +LS
Sbjct: 354 SIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNNGENYVLLS 400
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 266/459 (57%), Gaps = 8/459 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVT 63
L++ + Q+H F+K SL ++ + +L + S+++ S+F +
Sbjct: 37 LLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYAASIFRGID-D 95
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F + T+IR Y ++ ++EM++ G+ PDNFTYP ++KAC R I G +
Sbjct: 96 PCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQI 155
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GL++D ++ N+L+ MY C E++++ VFE++ + SWSSM + V
Sbjct: 156 HGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMW 215
Query: 184 SDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
S+ L +F M + N +VS +SAC + + G SIH + + N EL++ + T+
Sbjct: 216 SECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTS 275
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY KCG ++ A +F M ++N +++ MISG A +G G A+ +F++MI+ GL+PD
Sbjct: 276 LVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPD 335
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ + ++L+ACSH GLV EG+ F EM + ++PT EHYGC+VD+LGRAGL+EEA I
Sbjct: 336 HVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 395
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+++P E N V+ RSFL CR H Q + L + LLKL +Y+L +++ S + W
Sbjct: 396 QSIPIEQNDVVWRSFLSQCRVH-QNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMW 454
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
D A I KGL + PG S VKV + +S++ +
Sbjct: 455 DDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRS 493
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 270/466 (57%), Gaps = 52/466 (11%)
Query: 19 LHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
L QLH +KT+ + + RF S L + R +F ++ P F+YNTLIRA
Sbjct: 4 LKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMH-RPNCFSYNTLIRA 62
Query: 76 YAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
++++ +++ +F EM++ + P+ FT+P V KACGR + G VH L K GLDS
Sbjct: 63 LSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDS 122
Query: 135 DKYIGNTLLRMYAACK-------------------------------------------- 150
D+++ + ++RMY +C
Sbjct: 123 DEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVR 182
Query: 151 --EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
E++VA+ +F+EMP R VVSW+ MIAG+ +A++VF M++A PN VTLVS+
Sbjct: 183 IGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSV 242
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+ A + L + G+ +H YAV N + +D LG+AL++MY+KCG +EKA +VF + ++N+
Sbjct: 243 LPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNV 302
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+W+ +I+GLA +GR + F M + G+ P +++ +LSACSH GLV+EG+ +FD
Sbjct: 303 VTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDH 362
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M RV ++P +EHYGCMVD+LGRAGL+EE+ +I NMP +P+ VI ++ LGAC+ HG V
Sbjct: 363 MVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNV- 421
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
+ + + L++L P +YV +++ + GNW+ A++ + + +
Sbjct: 422 EMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKE 467
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 253/410 (61%), Gaps = 6/410 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT-SCSIESIKLFDEMLKTGLR-PDNFTYPF 106
++++ RS+F +P P +F++N+LI+ Y++ + S E I LF ++ +TG P++FT F
Sbjct: 39 NINYARSVFAQIP-HPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+KAC G G VHS + K G S ++ +L+ Y C+EI A+ VFEEMPVR+
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+V+W++MI+G + +A+++F M+ A P+++TLVS+VSAC + G +H+
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHA 217
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
Y + D+ L TALV+MY+KCG +E+A +VF M K+ +W+ MI G A +G
Sbjct: 218 YIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQD 277
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
AI F +M++T + PD ++F A+LSAC+H GLV G+ ++ M + I+P++EHYGC V
Sbjct: 278 AIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHYGCKV 336
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+L R+GL+EEAY I M PNA RS L C+ ++L L + + + LL+LEP
Sbjct: 337 DLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKK-KLLNLGEIVARYLLELEPLNA 395
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
NY++ +++ S W+ +EL + +K + VPGCS ++V DG E
Sbjct: 396 ENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEV-DGVVHEF 444
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 240/390 (61%), Gaps = 6/390 (1%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ LI Y +T E+I LF LK + P+ T+ V+ ACGR + +G VH L+
Sbjct: 173 SWTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLV 229
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+K +GN L+ MY C+ + A+ +F+E+P RD+VSW+S+I+G V C P D+L
Sbjct: 230 YKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSL 289
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F+ M+++ P+ + L S++SAC SL + G + Y G+E D+ +GTALV+MY
Sbjct: 290 ELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMY 349
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG +E A +FN + +N+ +W ++ GLA +G G+ A+ F MI G++P+ ++F
Sbjct: 350 AKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFL 409
Query: 308 AILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
AIL+AC H GLV EG++YF +M ++ +N P +EHYGCM+D+L RAGL++EAY IRNMP
Sbjct: 410 AILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMP 469
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+ +I + L AC+ +G V L + LL+L+ + YVL +++ + + WD
Sbjct: 470 LPPDVLIWGALLSACKANGNV-ELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVT 528
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ + KG+ K PG S ++V DG A E
Sbjct: 529 RVRRLMKDKGIRKFPGSSVIEV-DGEAHEF 557
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 196/380 (51%), Gaps = 9/380 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPL 66
I KT+ L Q+H + + L H+ ++S+ F + + + N +
Sbjct: 12 IHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGF-VDYAFDFLNQTDLHVGT 70
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
YNTLI AYA + + ++ ++ G PD +T+P V+KAC + L + G VH +
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K+G D Y+ N+LL Y+ C + A VF+EM VRDVVSW+ +I+G+V +A
Sbjct: 131 AVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEA 190
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F +M + PN T VS++ AC + + G+ +H + + +G ALV+M
Sbjct: 191 INLFLKMDVV---PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDM 247
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KC + +A K+F+ + ++++ SWT +ISGL + ++ LF M +G++PD I
Sbjct: 248 YVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LSAC+ LG +D G+ + E I+ + +VDM + G IE A HI +P
Sbjct: 308 TSVLSACASLGALDYGR-WVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP 366
Query: 367 TEPNAVILRSFLGACRNHGQ 386
N + LG HG
Sbjct: 367 NR-NIFTWNALLGGLAMHGH 385
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ LP + ++ ++I + +S++LF +M +G+ PD V+ AC
Sbjct: 257 ARKLFDELP-DRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACA 315
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G V I + G++ D +IG L+ MYA C I++A +F +P R++ +W++
Sbjct: 316 SLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNA 375
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
++ G +ALK F M A PN VT +++++AC V G S +
Sbjct: 376 LLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQP 435
Query: 233 LELDVALG--TALVEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNG 282
L ++++ + G +++A+K + N+ ++ W ++S NG
Sbjct: 436 FNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANG 488
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 265/443 (59%), Gaps = 12/443 (2%)
Query: 15 TVHHLHQLHTLFLKTSL--DHNTC--IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++ H H+L K +L D +T +I+ + L S R +F+ +P + ++N
Sbjct: 137 SLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVAS---ARKVFDEIPHRDSV-SWN 192
Query: 71 TLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
++I YAK C+ E++++F EM + G PD + ++ ACG + +G V + +
Sbjct: 193 SMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVE 252
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G+ + YIG+ L+ MYA C E++ A+ +F+ M RDV++W+++I+G+ +A+ +
Sbjct: 253 RGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILL 312
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
FH MK + N +TL +++SAC ++ + G+ I YA G + D+ + TAL++MY+K
Sbjct: 313 FHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 372
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT--GLKPDSISFS 307
G ++ A +VF M +KN SW MIS LA +G+ A+SLF M G +P+ I+F
Sbjct: 373 SGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFV 432
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LSAC H GLVDEG FD M+ ++ + P +EHY CMVD+L RAG + EA+ +IR MP
Sbjct: 433 GLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPE 492
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+ V L + LGACR+ V + + + +++L+++P NY++++ + + W+ +A
Sbjct: 493 KPDKVTLGALLGACRSKKNV-DIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSAR 551
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + + QKG+ K PGCSW++V +
Sbjct: 552 MRLLMRQKGITKTPGCSWIEVEN 574
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 213/387 (55%), Gaps = 12/387 (3%)
Query: 7 ETLIQLSK---TVHHLHQLHTLFLKTSLDH--NTCIISRFILTSLSISLHFTRSLFNNLP 61
E L+ L+K + L Q+HT + S H N ++S+ I + ++ LF+++
Sbjct: 25 ECLVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLK---NFPYSSLLFSHIA 81
Query: 62 VTPPLFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P +A+N +IRA T + ++ LF M+ L PDNFT+PF +C +
Sbjct: 82 PHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHA 141
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+ HSL+FK+ L SD + ++L+ YA C + A+ VF+E+P RD VSW+SMIAG+
Sbjct: 142 CAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKA 201
Query: 181 DSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+A++VF M + P+ ++LVSL+ AC L ++ G + + V G+ L+ +
Sbjct: 202 GCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYI 261
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G+AL+ MY+KCG +E A ++F+ M +++ +W +ISG A NG + AI LF M + +
Sbjct: 262 GSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCV 321
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+ I+ +A+LSAC+ +G +D GK DE A + + ++DM ++G ++ A
Sbjct: 322 TANKITLTAVLSACATIGALDLGKQ-IDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQ 380
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ ++MP + N + + A HG+
Sbjct: 381 RVFKDMP-QKNEASWNAMISALAAHGK 406
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 271/492 (55%), Gaps = 36/492 (7%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
+R + TL K + L ++H +K SL + ++++ + ++S + + +F L
Sbjct: 8 NRFVTTLRNCPK-IAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLE 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIG 120
P +F+YN +IR Y +I +F++ML T PD FT+PFV+K+C L +G
Sbjct: 67 -NPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLG 125
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------------------ 150
VH+ + K G + N L+ MY C
Sbjct: 126 QQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRL 185
Query: 151 -EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
++ A+ VF+EMP R +VSW++MI G+ +DAL +F M++ P+ ++++S++
Sbjct: 186 GQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVL 245
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
AC L + G+ IH Y+ +G + + ALVEMY+KCG +++A+ +FN M EK++
Sbjct: 246 PACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVI 305
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW+ MI GLA++G+G AI +F M + G+ P+ ++F +LSAC+H GL +EG YFD M
Sbjct: 306 SWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVM 365
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
Y+++P +EHYGC+VD+LGR+G +E+A I MP +P++ S L +CR H L
Sbjct: 366 RVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHN-LE 424
Query: 390 LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + LLKLEPE NYVL A++ + W+ + + I K + K PGCS ++VN
Sbjct: 425 IAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVN 484
Query: 450 DGSAEEMSKETA 461
+ E +S + +
Sbjct: 485 NLVQEFVSGDDS 496
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 259/446 (58%), Gaps = 6/446 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTP 64
+L++ K++ Q+H LK L +++ S + T S S+ + S+F + P
Sbjct: 35 SLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIE-EP 93
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F YNT+IR + E++ L+ EML+ G+ PDNFTYPFV+KAC + G +H
Sbjct: 94 GSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIH 153
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ +FK GL+ D ++ N L+ MY C I+ A VFE+M + V SWSS+I + +
Sbjct: 154 AHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWH 213
Query: 185 DALKVFHRMK-LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ L + M LVS +SACT L + G IH + N EL+VA+ T+L
Sbjct: 214 ECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSL 273
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY K G +EK VF M +KN S+T++I+GLA +GRG A+S+F+ M++ GL PD
Sbjct: 274 IDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDD 333
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ + +LSACSH GLV+EG F+ + + IKPT++HYGCMVD++GRAG+++ AY +I+
Sbjct: 334 VVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIK 393
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP +PN V+ RS L AC+ H L + + + + KL +Y++ A++ + + W
Sbjct: 394 SMPIKPNDVVWRSLLSACKVHHN-LEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWA 452
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
A + + +K L + PG S V+ N
Sbjct: 453 DVARIRTEMAEKHLVQTPGFSLVEAN 478
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 259/435 (59%), Gaps = 10/435 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILT-SLSI--SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q H LK L ++ S + T +LS S+ + S+F + P F +NT++R +
Sbjct: 6 QSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMD-EPGSFZFNTMMRGHV 64
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
K + E++ + EM + G++PDNFTYP ++KAC R + G VH+ I K+GL++D +
Sbjct: 65 KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 124
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L+ MY C EI V AVFE+M R V SWS++I + SD L++ M +N
Sbjct: 125 VQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM--SN 182
Query: 198 ES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
E LVS++SACT L + G S+H + + N L+V + T+L+EMY KCG +
Sbjct: 183 EGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLY 242
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
K +F M +KN S+++MISGLA +G G + +F +M++ GL+PD I + +L+ACS
Sbjct: 243 KGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACS 302
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLV EG F+ M + I+PT++HYGCMVD++GRAG I+EA +I++MP EPN V+
Sbjct: 303 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 362
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
RS L A + H L + K L KL+ + ++YV+ +++ + + W+ A +
Sbjct: 363 RSLLSASKVHNN-LQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFS 421
Query: 435 KGLNKVPGCSWVKVN 449
KGL++ PG S V+V
Sbjct: 422 KGLSQRPGFSLVEVK 436
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 249/398 (62%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +PV + ++N +I YA+T E+++LF +M+KT +RPD T VV AC +
Sbjct: 220 QKLFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VH I G S+ I N L+ +Y+ C E++ A +FE +P +DV+SW+++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VFN + K+L SW MI G A +GR + + LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G++ F M + Y + P +EHYGCM+D+LG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE +YVL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV-ELGESFAENLIKIEPENPGSYVL 577
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A+ +N KG+ KVPGCS ++++
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 203/396 (51%), Gaps = 41/396 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVT 63
+L+ KT+ L +H +K L + +S+ I L+ L + S+F +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ-E 96
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P L +NT+ R +A +S + ++KL+ M+ GL P+++T+PFV+K+C + G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 124 HSLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKEI 152
H + K+G D D Y+ +L+ MY A+ I
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+ A+ +F+E+PV+DVVSW++MI+G+ + +AL++F M N P+ T+V++VSAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++ G +H + +G ++ + AL+++YSKCG +E A +F + K++ SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEM 329
+I G A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y D+
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK- 395
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + ++DM + G IE A+ + ++
Sbjct: 396 -RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 235/381 (61%), Gaps = 2/381 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ ++I YA+ S S++LF EM K G+ PD FT ++ AC L+ G VH+ I
Sbjct: 319 SWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ + SD ++ N L+ MYA C + A +VF EM V+D+VSW++MI G+ P++AL
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEAL 438
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ N PNS+T+ ++ AC SL + G+ IH + + NG LD + ALV+MY
Sbjct: 439 NLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 497
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG + A +F+++ EK+L SWT+MI+G +G G+ AI+ F +M +G++PD +SF
Sbjct: 498 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 557
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+IL ACSH GL+DEG +F+ M I+P EHY C+VD+L RAG + +AY I+ MP
Sbjct: 558 SILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPI 617
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP+A I + L CR + V L + + + + +LEPE YVL A++ + + W+ +
Sbjct: 618 EPDATIWGALLCGCRIYHDV-KLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKK 676
Query: 428 LMVAINQKGLNKVPGCSWVKV 448
L I ++GL K PGCSW+++
Sbjct: 677 LRERIGRRGLRKNPGCSWIEI 697
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 182/375 (48%), Gaps = 38/375 (10%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ L + ++N++I Y S + + LF++ML G+ D T VV C
Sbjct: 205 RKLFDELG-DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
++ +G ++H K + + N LL MY+ ++ A VFE M R VVSW+SM
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ ++++FH M+ SP+ T+ +++ AC + G+ +H+Y N +
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D+ + AL++MY+KCG + A VF+ M+ K++ SW MI G + N N A++LF +
Sbjct: 384 QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE 443
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR---------------------- 331
M Q KP+SI+ + IL AC+ L ++ G+ + R
Sbjct: 444 M-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGA 502
Query: 332 ------VYNIKPTME--HYGCMVDMLGRAGLIEE---AYHIIRNMPTEPNAVILRSFLGA 380
++++ P + + M+ G G E A++ +RN EP+ V S L A
Sbjct: 503 LGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYA 562
Query: 381 CRNHGQVLYLDDNLG 395
C + G LD+ G
Sbjct: 563 CSHSG---LLDEGWG 574
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 161/342 (47%), Gaps = 58/342 (16%)
Query: 81 CSIESIKLFDEMLKTGLRPDN--FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
C + +++ E++ +PD TY V++ C I G +HS+I ++ D +
Sbjct: 79 CELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVL 138
Query: 139 GNTLLRMYAAC------------------------------------------------- 149
G+ L+ MY C
Sbjct: 139 GSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
+ ++ A+ +F+E+ RDV+SW+SMI+G+V+ L +F +M L + + T+VS+V
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV 258
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
+ C++ + G ++H YA+ ++ L L++MYSK G++ A +VF M E+++
Sbjct: 259 AGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV 318
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYF 326
SWT MI+G A G + ++ LF +M + G+ PD + + IL AC+ GL++ GK NY
Sbjct: 319 SWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
E ++ + ++DM + G + +A+ + M +
Sbjct: 379 KE----NKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 257/446 (57%), Gaps = 6/446 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTP 64
+L++ K++ ++H LK L +++ S + + S S+ + S+F + P
Sbjct: 36 SLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIE-EP 94
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F YNT+IR + E++ L+ EML+ G+ PDNFTYPFV+KAC + + G +H
Sbjct: 95 GSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ +F GL+ D ++ N L+ MY C I+ A VFE+M + V SWSS+I + +
Sbjct: 155 AHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWH 214
Query: 185 DALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ L + M + LVS +SACT L + G IH + N EL+V + T+L
Sbjct: 215 ECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY KCG +EK VF M KN S+T+MI+GLA +GRG A+ +F+ M++ GL PD
Sbjct: 275 IDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDD 334
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ + +LSACSH GLV EG F+ M + IKPT++HYGCMVD++GRAG+++EAY +I+
Sbjct: 335 VVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIK 394
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP +PN V+ RS L AC+ H L + + + KL +Y++ A++ + + W
Sbjct: 395 SMPIKPNDVVWRSLLSACKVHHN-LEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWA 453
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
A + + +K L + PG S V+ N
Sbjct: 454 NVARIRTEMVEKNLVQTPGFSLVEAN 479
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 263/447 (58%), Gaps = 4/447 (0%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLF 67
L+ + V H+ Q+H + + I ++ + T + ++ SLF+ L +
Sbjct: 9 LLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSK- 67
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ ++ +AK F E+L+ G+ PDN+T PFV++ C + IG +H ++
Sbjct: 68 TWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVV 127
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL SD ++ +L+ MYA C ++ A+ +FE M +D+V+W+ MI + C++ ++L
Sbjct: 128 LKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNA-YESL 186
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F RM+ P+ V +V++V+AC L + + Y V NG LDV LGTA+++MY
Sbjct: 187 VLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMY 246
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG VE A +VF+ M+EKN+ SW+ MI+ +GRG AI LF M+ + P+ ++F
Sbjct: 247 AKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFV 306
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L ACSH GL++EG +F+ M + ++P ++HY CMVD+LGRAG ++EA +I M
Sbjct: 307 SLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
E + + + LGACR H + + L + LL+L+P+ +YVL +++ + +G W+ A+
Sbjct: 367 EKDERLWSALLGACRIHSK-MELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAK 425
Query: 428 LMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ Q+ L K+PG +W++V++ + +
Sbjct: 426 FRDMMTQRKLKKIPGWTWIEVDNKTYQ 452
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 277/527 (52%), Gaps = 80/527 (15%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH----FTRSLFNN 59
R L + +++ + Q+H L + + + I S S+ + R +F+
Sbjct: 9 RRQPALWRRCRSLRQIKQVHALMVLRGFLSDPSALRELIFAS-SVGVRGGTAHARLVFDR 67
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK------TGLRPDNFTYPFVVKACGR 113
+P P F YNTLIR A + +++ ++ M + G+RPD T+PFV++AC
Sbjct: 68 IP-HPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAA 126
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC------------------------ 149
G VH+ + K G +SD ++ N L+ M+A C
Sbjct: 127 MGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAM 186
Query: 150 -------KEIDVAKAVFEEMPVR-------------------------------DVVSWS 171
+I A+ +F+E PV+ DVVSW+
Sbjct: 187 ISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWN 246
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AV 229
+MI+G+V C S A+++F +M+ E P++VT++SL+SAC ++ AG +H +
Sbjct: 247 AMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGR 306
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+ + LG AL++MY+KCG + A +VF LM++KN+ +W +I GLA +G AI
Sbjct: 307 FSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAID 366
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
+F KM+Q +KPD I+F A+L ACSH G+VD+G YF+ M + Y I+P ++HYGCMVDML
Sbjct: 367 VFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDML 426
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
RAGL++EA+ I M EPN VI R+ LGACR HG+ L L ++ + LLK + ++
Sbjct: 427 SRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGE-LELAEHANQELLKARSDASGDF 485
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
VL +++ + G W + + ++ G+NK GC+ V DGS++++
Sbjct: 486 VLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCA---VVDGSSKDV 529
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 244/402 (60%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S++ R +F+NL + + ++ +I AYA++ E+ +L +M + G +P+ TY ++
Sbjct: 179 SINEARRIFDNL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSIL 237
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + VH GL+ D +G L++MYA ID A+ VF+ M VRDVV
Sbjct: 238 NACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVV 297
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI F +A +F +M+ P+++ +S+++AC S + + IH +A
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +GLE+DV +GTALV MYSK G ++ A VF+ M+ +N+ SW MISGLA +G G A+
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M G+KPD ++F A+LSACSH GLVDEG++ + M +VY I+P + H CMVD+
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDL 477
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + EA I NM +P+ + LG+CR +G V L + + K LKL+P+ A
Sbjct: 478 LGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNV-ELGELVAKERLKLDPKNAAT 536
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + +G WD + + + ++G+ K PG SW++V++
Sbjct: 537 YVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDN 578
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 210/406 (51%), Gaps = 45/406 (11%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K+ ++ N +++ + + L R +F+ L V ++N +I Y +
Sbjct: 49 QVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL-VKKSGASWNAMIAGYVEH 107
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ++++LF EM G++P+ TY ++KAC + G VH+ I GL+SD +G
Sbjct: 108 KHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVG 167
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
LLRMY C I+ A+ +F+ + D++SW+ MI + + +A ++ +M+
Sbjct: 168 TALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFK 227
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN++T VS+++AC S ++ + +H +A+ GLELDV +GTALV+MY+K G ++ A V
Sbjct: 228 PNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVV 287
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC------ 313
F+ M+ +++ SW +MI A++GRG+ A LF +M G KPD+I F +IL+AC
Sbjct: 288 FDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL 347
Query: 314 -----------------------------SHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
S G +D+ + FD M +V N+ +
Sbjct: 348 EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM-KVRNVVS----WNA 402
Query: 345 MVDMLGRAGLIEEAYHIIRNMPT---EPNAVILRSFLGACRNHGQV 387
M+ L + GL ++A + R M +P+ V + L AC + G V
Sbjct: 403 MISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLV 448
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 169/345 (48%), Gaps = 43/345 (12%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
E+I + L+ GL D+F Y V+K C + + VH I K ++ + ++ N LL
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
+Y C + A+ VF+ + + SW++MIAG+V DA+++F M PN+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T + ++ AC SL ++ G+ +H+ GLE DV +GTAL+ MY KCG + +A ++F+ +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL----- 318
++ SWT+MI A +G G A L +M Q G KP++I++ +IL+AC+ G
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 319 ------------------------------VDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+D+ + FD M +V ++ + M+
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM-KVRDVVS----WNVMIGA 305
Query: 349 LGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQVLYL 390
G EAY + M TE P+A++ S L AC + G + ++
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWV 350
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 267/459 (58%), Gaps = 8/459 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVT 63
L++ + Q+H F+K SL +++ + +L + S+++ S+F +
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID-D 94
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +NT+IR Y E++ ++EM++ G PDNFTYP ++KAC R I G +
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GL++D ++ N+L+ MY C E++++ AVFE++ + SWSSM++
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 184 SDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
S+ L +F M N +VS + AC + + G SIH + + N EL++ + T+
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY KCG ++KA +F M ++N +++ MISGLA +G G A+ +F+KMI+ GL+PD
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ + ++L+ACSH GLV EG+ F EM + ++PT EHYGC+VD+LGRAGL+EEA I
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+++P E N VI R+FL CR Q + L + LLKL +Y+L +++ S W
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVR-QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMW 453
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
D A I KGL + PG S V++ + +S++ +
Sbjct: 454 DDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 259/464 (55%), Gaps = 15/464 (3%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL--P 61
+H L++ S T L Q LK+ L N +++R S S + L ++L P
Sbjct: 32 QHCLRLLERSSTPASLLQSFAFLLKSGLHSNPLVVTRLFAASASAAPALLEPLVSSLLGP 91
Query: 62 VTP-PLFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
P F NTLIR + + S + F ML+ + P+ FT+PF++K+C L
Sbjct: 92 SLPLDAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCA--ALP 149
Query: 118 G---IGGSVHSLIFKVGLDSDKYIGNTLLRMYA--ACKEIDVAKAVFEEMPVRDVVSWSS 172
G +G H+ K G +D Y+ NTL+ MY+ + A+ VFE MP V+WS+
Sbjct: 150 GSPDVGLQAHAAALKFGFAADHYVSNTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSA 209
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+V SDA+ +F M+++ P+ VT++ +++A L + + + G
Sbjct: 210 MIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFVEREG 269
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ V L AL++ +KCG V+ A VF M E+ + SWT +I LA GRG A+ +F
Sbjct: 270 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFE 329
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G+ PD ++F +L+ACSH G+VDEG+ YFD M Y I+P +EHYGCMVDM GRA
Sbjct: 330 EMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRA 389
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G++E+ +R MP +PN +I R+ + ACR HG+ L L +++ + LL P ANYV+
Sbjct: 390 GMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGR-LELGESITRNLLNEFPAHEANYVML 448
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
++V +L+ W +E+ ++++G+ KVPGCS V++ DG E
Sbjct: 449 SNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVEL-DGEVHEF 491
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 267/459 (58%), Gaps = 8/459 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVT 63
L++ + Q+H F+K SL +++ + +L + S+++ S+F +
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID-D 94
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +NT+IR Y E++ ++EM++ G PDNFTYP ++KAC R I G +
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GL++D ++ N+L+ MY C E++++ AVFE++ + SWSSM++
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 184 SDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
S+ L +F M N +VS + AC + + G SIH + + N EL++ + T+
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY KCG ++KA +F M ++N +++ MISGLA +G G A+ +F+KMI+ GL+PD
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ + ++L+ACSH GLV EG+ F EM + ++PT EHYGC+VD+LGRAGL+EEA I
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+++P E N VI R+FL CR Q + L + LLKL +Y+L +++ S W
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVR-QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMW 453
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
D A I KGL + PG S V++ + +S++ +
Sbjct: 454 DDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 264/448 (58%), Gaps = 14/448 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL------SISLHFTRSLFNNLPV 62
L+Q + LHQ+H + + SRF+LT L + S+ +TR +F +P
Sbjct: 18 LLQAGPRLKLLHQVHAHVIVSGYG-----CSRFLLTKLLNLACAAGSISYTRQIFLIVP- 71
Query: 63 TPPLFAYNTLIRAYAK-TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P F + +LIR+ +K + S+ S+ + M+ + + P N+T+ V+K+C + + G
Sbjct: 72 NPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGR 131
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H + G SD Y+ L+ Y C + A+ VF++M R VV+W+SMI+G+
Sbjct: 132 IIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNG 191
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+A+++F RMK PNS T VS++SAC L G +H YAV NGL+L+V LGT
Sbjct: 192 FAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGT 251
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L+ MY++CG+V KA +VF+ M+E+N+ +WT MISG NG G+ A+ LF +M + GL P
Sbjct: 252 SLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLP 311
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+SI+F A+LSAC+H GLV+EG+ F+ M Y + P +EH+ C+VDMLGRAGL++EAY+
Sbjct: 312 NSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNF 371
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ + EP I + LGAC+ H L + + L EP A+YV+ +++ +L+G
Sbjct: 372 IKEIHEEPAPAIWTAMLGACKMHKN-FGLGAQVAEHRLASEPGNPAHYVILSNIYALAGR 430
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
D + + +K L K G S + ++
Sbjct: 431 MDQVEMVRDNMIRKCLKKQVGYSTIDLD 458
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 245/400 (61%), Gaps = 4/400 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + L ++N++I Y++ + +++ LF EM G PD T ++ ACG
Sbjct: 180 ARRVFDEIS-EKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACG 238
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+G+G + + + +D + ++G+ L+ MY C ++ A+ VF+ M +DVV+W++
Sbjct: 239 DLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNA 298
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ +A+ +F M+ + +P+ +TLV ++SAC S+ + G+ + +YA G
Sbjct: 299 MITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERG 358
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ D+ + TAL++MY+KCG ++ A +VF M +KN SW MIS LA +GR ++SLF
Sbjct: 359 LQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFK 418
Query: 293 KMIQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
+M + G ++P+ ISF +LSAC H GLVDEG+ FD M+ + + P +EH+ CMVD+L
Sbjct: 419 RMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLA 478
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG + EA+ I MP +P+ V+L + LGAC+ V + + + +LL++EP NY+
Sbjct: 479 RAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNV-DVSERVMHMLLEMEPLNSGNYI 537
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + + WD +A + V + Q+G+ K PGCSW+++ +
Sbjct: 538 ISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIEN 577
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 215/380 (56%), Gaps = 7/380 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+L++ + L Q+HT + ++ ++ RFI + LF+ +P P +
Sbjct: 36 SLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLK---DFNNASLLFSQIPY-PNEY 91
Query: 68 AYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
A+N +IR T +I+ + +M G+RP+NFTYPFV AC L++ G HS
Sbjct: 92 AFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSG 151
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K GL +D ++ ++L+ MY+ C E+ A+ VF+E+ +D+VSW+SMI+G+ DA
Sbjct: 152 VLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDA 211
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F M+ A P+ +TLVS++ AC L ++ G I + V N ++L+ +G+AL+ M
Sbjct: 212 VGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGM 271
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG + A +VF+ M +K++ +W MI+G A NG + AI LF+ M ++G+ PD I+
Sbjct: 272 YGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITL 331
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSAC+ +G +D GK + D A ++ + ++DM + G +++A + +MP
Sbjct: 332 VGVLSACASIGALDFGK-WLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMP 390
Query: 367 TEPNAVILRSFLGACRNHGQ 386
+ N V + + A HG+
Sbjct: 391 -QKNEVSWNAMISALAFHGR 409
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 255/433 (58%), Gaps = 3/433 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L + H L +++ I+++F + +S + + +F ++P P F +N +IR +A
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIP-NPCSFLWNVMIRGFA 794
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S++L+ +M++ GL+PD F +PF +K+C + G +H + G +D +
Sbjct: 795 TDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLF 854
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ MYA C +I+ A+ VF++M VRD+VSW+SMI+G+ S+ L F M+ +
Sbjct: 855 VDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG 914
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
PN V+++S++ AC +L +R GE HSY + G E D+ + TA+++MYSKCG ++ A
Sbjct: 915 VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F+ K+L W+ MI+ +G G AI LF +M++ G++P ++F+ +LSACSH G
Sbjct: 975 CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
L++EGK YF M + I + +Y CMVD+LGRAG + EA +I NMP EP+A I S
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
LGACR H L L + + L L+P +VL +++ + W+ ++ + ++G
Sbjct: 1095 LGACRIHNN-LDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGA 1153
Query: 438 NKVPGCSWVKVND 450
NK+ G S V+ ++
Sbjct: 1154 NKIQGFSLVEYDN 1166
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 236/432 (54%), Gaps = 4/432 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L ++ D + +++ + L + + +LF+ +P + +++T+I YA
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMIACYANNE 286
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E++ LF EM++ P++ T ++AC + G +H + G + D +
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST 346
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C D A +F+ +P +DVVSW ++++G+ ++ VF M P
Sbjct: 347 ALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQP 406
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++V +V +++A + L + +H Y V +G +V +G +L+E+YSKCG + A K+F
Sbjct: 407 DAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLF 466
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGLV 319
M +++ W+ MI+ +GRG A+ +F +M++ + ++P++++F +ILSACSH GLV
Sbjct: 467 KGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLV 526
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG FD M Y ++P EH+G MVD+LGR G + +A II MP + + LG
Sbjct: 527 EEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLG 586
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H + + + K L L+P Y+L +++ ++ G WD AEL I ++GL K
Sbjct: 587 ACRIHHNI-EMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645
Query: 440 VPGCSWVKVNDG 451
+ G S V+V G
Sbjct: 646 MFGQSMVEVRGG 657
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 200/373 (53%), Gaps = 7/373 (1%)
Query: 1 MISRHIET-LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFN 58
M SR + L Q + QLH+ KT + H+T ++ L + SL R +F+
Sbjct: 1 MRSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLI 117
P P + +N+ +R+Y + E+++LF M+ T G PDNFT P +KAC ++
Sbjct: 61 ETP-HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119
Query: 118 GIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+G +H K + SD ++G+ L+ +Y+ C ++ A VFEE D V W+SM+ G
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179
Query: 177 FVACDSPSDALKVFHRMKLAN-ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ + P +AL +F +M + + + VTLVS+VSAC L+NV+AG +H + +
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ L +L+ +Y+K G + A +F+ M EK++ SW+ MI+ A+N N A++LF +MI
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ +P+S++ + L AC+ ++EGK ++A + ++DM +
Sbjct: 300 EKRFEPNSVTVVSALQACAVSRNLEEGKK-IHKIAVWKGFELDFSVSTALIDMYMKCSCP 358
Query: 356 EEAYHIIRNMPTE 368
+EA + + +P +
Sbjct: 359 DEAVDLFQRLPKK 371
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 179/359 (49%), Gaps = 35/359 (9%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGS 122
P + +++ Y + + E++ LF +M+ + D T VV AC + L + G
Sbjct: 168 PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSC 227
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH L+ + D D + N+LL +YA +A +F +MP +DV+SWS+MIA + ++
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 287
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++AL +FH M PNSVT+VS + AC N+ G+ IH AV G ELD ++ TA
Sbjct: 288 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTA 347
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY KC ++A +F + +K++ SW ++SG A NG ++ +F M+ G++PD
Sbjct: 348 LIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 407
Query: 303 SISFSAILSACSHLGLVDE-------------------GKNYFDEMARVYNIKPTMEHYG 343
+++ IL+A S LG+ + G + + ++ ++ ++ +
Sbjct: 408 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 467
Query: 344 CMV--------------DMLGRAGLIEEAY-HIIRNMPTEPNAVILRSFLGACRNHGQV 387
M+ + GR G E + +++N PN V S L AC + G V
Sbjct: 468 GMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLV 526
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 5/176 (2%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
LV L AC N R+ +HS G+ D T L +Y+KC ++ A KVF+
Sbjct: 6 VLVDLFQACN---NGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEG 322
N+ W + + + LF MI T G PD+ + L AC+ L +++ G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
K + I M +V++ + G + EA + P+ V+ S +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF-QRPDTVLWTSMV 177
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 247/398 (62%), Gaps = 2/398 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ +PV + ++N +I YA+ S E++ LF++M K + P+ T V+ AC
Sbjct: 214 ARQLFDEMPVKD-VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + +G S+ S I GL S+ + N L+ MY+ C ++ A+ +F++M RDV+SW+
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ S +AL +F M + P +T +S++ +C L + G+ IH+Y N
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ +L T+L+++Y+KCG++ A +VF+ M+ K+L SW MI GLA +G+ + A LF+
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
KM G++P+ I+F ILSAC H GLVD G+ +F M + Y I P +HYGCM+D+LGRA
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRA 512
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL EEA +++NM +P+ I S LGACR+HG+V L + + + L +LEP+ YVL
Sbjct: 513 GLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRV-ELGELVAERLFELEPDNPGAYVLL 571
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + +G WD A + +N +G+ KVPGC+ ++V++
Sbjct: 572 SNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 223/447 (49%), Gaps = 70/447 (15%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTP 64
L+ +++ Q+H +KT L HNT + F S S + + SLFN++ P
Sbjct: 35 LLSKCQSIRTFKQIHAHIIKTGL-HNTLFALSKLIEFSAVSRSGDISYAISLFNSIE-EP 92
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF +N++IR + + ++ F M+ +G+ P+++T+PF++K+C + G +H
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEI-------------------------------D 153
+ + K+G SD +I +L+ MYA E+ D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F+EMPV+DVVSW++MIAG+ +AL +F M+ AN PN T+VS++SAC
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+ G S+ S+ GL ++ L AL++MYSKCG ++ A ++F+ M E+++ SW +
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNY 325
MI G A++LF +M+ +G++P I+F +IL +C+HLG +D G KN+
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 326 -----------FDEMARVYNIK-----------PTMEHYGCMVDMLGRAGLIEEAYHIIR 363
D A+ NI ++ + M+ L G ++A+ +
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452
Query: 364 NMPT---EPNAVILRSFLGACRNHGQV 387
M + EPN + L AC++ G V
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLV 479
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV--FEEMPVR 165
+K +C I +H+ I K GL + + + L+ A + D++ A+ F +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
++ W+SMI G SP+ AL F RM + PNS T L+ +C L + G+ IH
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 226 SYAVVNGLELDVALGTALVEMYSKC-------------------------------GHVE 254
++ + G DV + T+L+ MY++ G+++
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+A ++F+ M K++ SW MI+G A GR A+ LF M + + P+ + ++LSAC+
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 315 HLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+D G +++ ++ N+K ++DM + G ++ A + +M
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLV----NALIDMYSKCGDLQTARELFDDM 322
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 267/484 (55%), Gaps = 43/484 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L + H L +K +L + ++++ I + + + + LF + + P + YN +IRA
Sbjct: 4 LKKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEV-IDPNAYLYNAMIRACT 62
Query: 78 KTSCSIESIKLFDEMLKTG---------LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
S +I + +ML+ + PD FT+PFVVKAC R L +G VH+ F
Sbjct: 63 HNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFF 122
Query: 129 KVGLDSDKYIGNTLLRMYAACK-------------------------------EIDVAKA 157
K G S N L+ MY C ++ A+A
Sbjct: 123 KFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARA 182
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F+EMP R +VSW+++I+G+ S DAL VF M++A P+ +++S++ AC L
Sbjct: 183 LFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGA 242
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ G+ IH + NGL + AL+EMY+KCG +++A ++F+ MR +++ SW+ MI G
Sbjct: 243 LETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGG 302
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
LA++G+ AI++F +M QT +KP+ I+F +LSAC+H G +EG YFD M + ++I+P
Sbjct: 303 LANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEP 362
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
+EHYG +VD+LGRAG + +A I+ MP +P++ I S L +CR H + + +
Sbjct: 363 EIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAM-EH 421
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
L +LEP+ NYVL +++ + G WD + + + K + K PGCS ++VN+ + E +S
Sbjct: 422 LEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVS 481
Query: 458 KETA 461
+ +
Sbjct: 482 GDDS 485
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 275/476 (57%), Gaps = 49/476 (10%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI----SLHFTRSLFNNLPVTPPLFAYN 70
T+ L Q+HT + L +N ++ +F+ S+++ +L ++ + + P LFA N
Sbjct: 21 TLKELKQIHTQLVINGLLNNRELLGQFV-ASIAVRNPTNLLYSNQILDQC-AKPTLFALN 78
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++IRAY+K+ +S + ++++L++ + PDN+T+ F+V+ C + G +VH +
Sbjct: 79 SMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSACEA-GPAVHGALI 137
Query: 129 KVGLDSDKYIGNTLLRMYA-------------------------------ACKEIDVAKA 157
K G + D ++ + L+ MYA C +I A+
Sbjct: 138 KHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARN 197
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F+ MP RD VSW++MIAG+ +AL +F M++ N V+++S+V+ACT L
Sbjct: 198 LFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGA 257
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ G+ H+Y N +++ V LGTALV+MY KCG+V++A KVF M EKN+ +W+ I G
Sbjct: 258 LDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGG 317
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
LA NG G + LF+ M G+ P+ I+F ++L CS +G VDEG+++FD M R + I+P
Sbjct: 318 LAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEP 377
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
+EHYGCMVD+ GRAG +EEA + I MP +P+A + L ACR +Y + LG+
Sbjct: 378 RLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACR-----MYKNMELGEF 432
Query: 398 ----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L+++E + YV +++ + +GNWD + + ++ +G++K+PGCS ++VN
Sbjct: 433 ASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVN 488
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 274/484 (56%), Gaps = 38/484 (7%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPL 66
+LI SK+V HL Q+H L+ L HN + + + ++ L + +FN P +
Sbjct: 52 SLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD-EPNV 110
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F+++ +I ++ ++ + + +ML G+ P+ FT+ V+K+C + G +H
Sbjct: 111 FSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQ 166
Query: 127 IFKVGLDSDKYIG-------------------------------NTLLRMYAACKEIDVA 155
K+GL SD Y+ T+L Y+ E+D A
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
+++FE M RDVV W+ MI G+ P+++LK+F RM +A PN VT+++++SAC L
Sbjct: 227 RSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQL 286
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ +G IHSY G++++V +GTAL++MYSKCG +E A VF+ +R+K++ +W MI
Sbjct: 287 GALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMI 346
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
G A +G +A+ LF +M +TG KP I+F ILSAC H GLV+EG+++F M Y I
Sbjct: 347 VGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGI 406
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
+P +EHYGCMV++LGRAG +EEAY +++NM + V+ + LG CR H + L + +
Sbjct: 407 EPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNI-KLGEEIA 465
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
K L+ + YVL +++ + +GNW+ A++ + + G+ K GCS ++V++ E
Sbjct: 466 KFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEF 525
Query: 456 MSKE 459
++ E
Sbjct: 526 VAGE 529
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 265/450 (58%), Gaps = 6/450 (1%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNL 60
H +L+ +++ L Q+ +KT+L + ++++ I L + + LF+ +
Sbjct: 31 HPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
+ + +N + R YA+++ + LF E+L +GL PD++T+ ++KAC + G
Sbjct: 91 -LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG 149
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+H K+GL+ + YI TL+ MYA C +++ A+ VF+EM +VS++++I G+
Sbjct: 150 MGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 209
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
P++AL +F ++ +N P VT++S++ +C L + G+ IH Y G + V +
Sbjct: 210 SQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVN 269
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
TAL++M++KCG + A +F MR ++ Q+W+ MI A +G G AIS+F +M + G++
Sbjct: 270 TALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVR 329
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD I+F +L ACSH GLV++G+ YF M++ Y I P ++HYGCMVD+LGRAG ++EAY+
Sbjct: 330 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYN 389
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+ + + ++ R+ L AC HG V + + + + +L+ G +YV+ +++ + G
Sbjct: 390 FVDKLEIKATPILWRTLLSACSTHGNV-EMAKRVIERIFELDDAHGGDYVILSNLYARVG 448
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVND 450
W+ L + +G+ KVPGCS V+VN+
Sbjct: 449 RWEDVNHLRKLMKDRGVVKVPGCSSVEVNN 478
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 264/471 (56%), Gaps = 43/471 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH +K N + + I L SLS + R +F+ + +N +I Y ++
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDR-SSKGDVVTWNVMISGYNRS 198
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
ES+KLFDEM + + P + T V+ AC + + +G VH + + ++ + +
Sbjct: 199 KQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLE 258
Query: 140 NTLLRMYAACKEID-------------------------------VAKAVFEEMPVRDVV 168
N L+ MYAAC ++D +A+ F++MP RD V
Sbjct: 259 NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFV 318
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI G++ + + L +F M+ AN P+ T+VS+++AC L + GE I +Y
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
N +++D +G AL++MY CG+VEKA ++FN M ++ SWT +I GLA NG G A+
Sbjct: 379 DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEAL 438
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F++M++ + PD ++ +L AC+H G+VD+GK +F M + I+P + HYGCMVD+
Sbjct: 439 DMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
LGRAG ++EA+ +I+NMP +PN+++ S LGACR H D+ + ++ +L+LEPE
Sbjct: 499 LGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH-----RDEEMAEMAAQQILELEPE 553
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
GA YVL ++ + W+ E+ + +G+ K PGCS +++N GS E
Sbjct: 554 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMN-GSVHE 603
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 199/396 (50%), Gaps = 42/396 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL---HFTRSLFNNLPVTP 64
+LI+ K++ L Q+H+ + T L N + ++ I L + R +F+ +P P
Sbjct: 24 SLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP-GP 82
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F +N +I+ Y++ C ++ ++ EML+ G+ PD +TYPF++K R + G +H
Sbjct: 83 NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
I K+G S+ ++ N L+ +Y+ E+ VA+ VF+ DVV+W+ MI+G+
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+++K+F M+ P+S+TLVS++SAC+ L ++ G+ +H Y +E L AL+
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALI 262
Query: 245 EMYSKCGHVEKAFKVFNLMR-------------------------------EKNLQSWTI 273
+MY+ CG ++ A +F+ M+ E++ SWT
Sbjct: 263 DMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTA 322
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDEMA 330
MI G R +SLF +M +KPD + +IL+AC+HLG ++ G K Y D+
Sbjct: 323 MIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDK-- 380
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
IK ++DM G +E+A I MP
Sbjct: 381 --NEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMP 414
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 279/482 (57%), Gaps = 48/482 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNNLPVT 63
++++ T+ L Q+HT L L ++ ++ +F+ S++++ LH++ + +N
Sbjct: 14 SMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFV-ASIALNNPNNLHYSNQVLDN-SQN 71
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGG 121
P LF +N++IRA++K+S S + +L + L PDN+T+ F+V+ + L G G
Sbjct: 72 PTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGS 131
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYA------ACK------------------------- 150
SVH K G + D ++ + L+ MYA AC
Sbjct: 132 SVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMG 191
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A+ +F++M +D ++W++MI+G+V C +AL +F+ M+ N V++VS++S
Sbjct: 192 DVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLS 251
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC+ L + G H+Y N L + + LGTAL++MY+KCG++ KA +VF M+EKN+ +
Sbjct: 252 ACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYT 311
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W+ I GLA NG G + LF+ M Q ++P+ I+F ++L CS +GLV+EG+ +F+ M+
Sbjct: 312 WSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMS 371
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
+VY I+P +EHYGCMVD+ GRAG ++EA + I +MP P+ + L AC+ +Y
Sbjct: 372 KVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACK-----IYR 426
Query: 391 DDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ +G+L +++LE + YVL +++ + S +WD + + +N KG+ K PGCS +
Sbjct: 427 NMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVI 486
Query: 447 KV 448
+V
Sbjct: 487 EV 488
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 266/481 (55%), Gaps = 47/481 (9%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLH-FTRSLFNNLPVTPPLFAYNTL 72
++ + Q+H + L+ ++++ + LT L + + + R +F + P F + L
Sbjct: 52 INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNP-FLWTAL 110
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS-LIFKVG 131
IR YA +ES+ L++ M + G+ P +FT+ ++KAC L + +G VH+ I G
Sbjct: 111 IRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGG 170
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEM----------------------------- 162
SD Y+GNTL+ MY C + VF+EM
Sbjct: 171 FGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFD 230
Query: 163 --PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
P++D+V+W++M+ G+ P +AL+VF RM+ A + VTLV ++SAC L +
Sbjct: 231 GLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKY 290
Query: 221 GESIHSYAVVNGL--ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ A +G +V +G+AL++MY+KCG VE A+KVF M E+N+ S++ MI G
Sbjct: 291 ANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGF 350
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G A+ LF +M++T +KP+ ++F +L+ACSH G+V++G+ F M + + P+
Sbjct: 351 AMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPS 410
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL- 397
+HY CMVD+LGRAG +EEA ++++ MP P+ + + LGACR HG + ++ ++
Sbjct: 411 EDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG-----NPDMAQIA 465
Query: 398 ---LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
L +LEP NY+L +++ + +G WD +++ + KGL K PGCSWV+ G
Sbjct: 466 ASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIH 525
Query: 455 E 455
E
Sbjct: 526 E 526
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 263/445 (59%), Gaps = 5/445 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKT---SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP 65
LI + L Q+ +K+ + NT +I+ + S+ + R LF+ + P
Sbjct: 37 LISKCNSERELMQIQAYAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMS-EPD 95
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ +N++ R Y++++ +E LF E+L+ L PDN+T+P ++KAC + G +H
Sbjct: 96 IVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHC 155
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K+G+D + Y+ TL+ MY C+++D A+ VF+ + VV +++MI G+ + P++
Sbjct: 156 LSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNE 215
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F M+ N PN +TL+S++S+C L ++ G+ IH YA +G V + TAL++
Sbjct: 216 ALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALID 275
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M++KCG ++ A +F MR K+ Q+W+ MI A++G+ ++ +F +M ++PD I+
Sbjct: 276 MFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEIT 335
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +L+ACSH GLV+EG+ YF M + I P+++HYG MVD+LGRAG +E+AY I +
Sbjct: 336 FLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKL 395
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P P ++ R L AC +H L L + + + +L+L+ G +YV+ +++ + + W+
Sbjct: 396 PISPTPMLWRILLAACSSHNN-LELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAV 454
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
L + + KVPGCS ++VN+
Sbjct: 455 DSLRKVMKDRKAVKVPGCSSIEVNN 479
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 264/448 (58%), Gaps = 10/448 (2%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSI--SLHFTRSLFNNLPVTP 64
+L++ + Q H LK L ++ S + T +LS S+ + S+F +
Sbjct: 36 SLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELG 95
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F +NT++R + K + E++ + EM + G++PDNFTYP ++KAC R + G VH
Sbjct: 96 S-FQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ I K+GL++D ++ N+L+ MY C EI V AVFE+M R V SWS++I + S
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 214
Query: 185 DALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
D L++ M +NE LVS++SACT L + G S+H + + N L+V + T
Sbjct: 215 DCLRLLGDM--SNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVET 272
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L+EMY KCG + K +F M +KN S+++MISGLA +G G + +F +M++ GL+P
Sbjct: 273 SLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP 332
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I + +L+ACSH GLV EG F+ M + I+PT++HYGCMVD++GRAG I+EA +
Sbjct: 333 DDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALEL 392
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I++MP EPN V+ RS L A + H L + K L KL+ + ++YV+ +++ + +
Sbjct: 393 IKSMPMEPNDVLWRSLLSASKVHNN-LQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQR 451
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W+ A+ + KGL++ PG S V+V
Sbjct: 452 WEDVAKTRTNMFSKGLSQRPGFSLVEVK 479
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 268/482 (55%), Gaps = 40/482 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
S+ + ++ + T+ L +H L + +L H+ +++ RF S + LH+ LF+
Sbjct: 182 SQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQ 241
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL---- 115
+ P F YNTLIR Y+K+S +S++LF++M + + PD FT+ F++K R
Sbjct: 242 IH-QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 300
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA--------------------------- 148
LI +H + K+G ++ N L+ +YAA
Sbjct: 301 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 360
Query: 149 ----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
E+++A+ VF EMP RDVVSW+ M++G+ +AL++F M+ P+ V
Sbjct: 361 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 420
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+VS++SACTSL ++ G +H Y NG V+L AL++MY+KCG ++ A++VFN M
Sbjct: 421 MVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 480
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
K+L +W MIS A++G A +F M+ +G++PD ++F A+L+A +H G VD+G
Sbjct: 481 RKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYG 540
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
F+ M R Y ++ +EHYGCMVDMLGRAG +EEAY +I +M N V+ + L ACR +
Sbjct: 541 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 600
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G V + + + K L++L+P+ G Y+L + +G A EL A++ G K GCS
Sbjct: 601 GDV-EMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCS 659
Query: 445 WV 446
WV
Sbjct: 660 WV 661
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 267/504 (52%), Gaps = 70/504 (13%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNNLPVTP 64
+L Q L QLH + L+ T ++ I S +S ++ + LF + P
Sbjct: 18 SLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQIS-QP 76
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+F +NT+IR A+T ++ L+ +M G+RPD FT+ FV+KAC + + +G +H
Sbjct: 77 DIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIH 136
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------ID 153
+ K G S+ ++ NTL+ +A C + +D
Sbjct: 137 GKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLD 196
Query: 154 VAKAVFEEMPV-------------------------------RDVVSWSSMIAGFVACDS 182
VA+ +F+EMP+ +DVV+W++MIAG+V
Sbjct: 197 VARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRL 256
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--YAVVNGLELDVALG 240
+AL++F M+ + P+ VT++S++SA L ++ G+ IH + + G +L V L
Sbjct: 257 NKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCG-DLSVLLS 315
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL++MY+KCG + A +VF MR+K+ SW +I GLA +G +I+LF +M++ +K
Sbjct: 316 NALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMK 375
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ I+F A+L ACSH G V EG+ YF+ M V+ I+P ++HYGCMVD+LGRAGL+ EA+
Sbjct: 376 PNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFD 435
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
I M EPNA+I R+ LGACR HG V L + LLK+ + +YVL +++ + G
Sbjct: 436 FIDTMEIEPNAIIWRTLLGACRVHGDV-ELGRRANEQLLKMRKDESGDYVLLSNIYASQG 494
Query: 421 NWDTAAELMVAINQKGLNKVPGCS 444
WD ++ ++ G+ K G S
Sbjct: 495 EWDGVQKVRKLMDDGGVKKKVGHS 518
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 244/398 (61%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P+ + ++N +I YA+ E+++LF+EM+K ++PD T V+ C
Sbjct: 164 QKMFDEIPIKD-VVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH 222
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ +G +HS I G S+ + N L+ +Y+ C E++ A +FE + +DV+SW+++
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTL 282
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL VF M E+PN VT++S++ AC L + G IH Y +
Sbjct: 283 IGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 342
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ + +L T+L++MY+KCG++E A +VF+ + K+L S MI G A +GR + A L
Sbjct: 343 GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLL 402
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH GL D G+ F M Y I+P +EHYGCM+D+LGR
Sbjct: 403 SRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGR 462
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I +M EP+ VI S L AC+ H + L L + + + L+K+EP+ +YVL
Sbjct: 463 SGLFKEAEELINSMTMEPDGVIWGSLLKACKIH-KNLELGELIAQKLMKIEPKNPGSYVL 521
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + S WD A + +N KGL KVPGCS ++++
Sbjct: 522 LSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEID 559
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 186/354 (52%), Gaps = 37/354 (10%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
ILT L + S+F ++ P ++NT+IR +A +S I ++ L+ M+ GL P++
Sbjct: 20 ILTPYFHGLPYAISVFKSIQ-EPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNS 78
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------- 147
+T+PF+ K+C + G +H+ I K GL D ++ +L+ MYA
Sbjct: 79 YTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDT 138
Query: 148 -----------------ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
+ +D A+ +F+E+P++DVVSW++MI+G+ +AL++F
Sbjct: 139 SSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELF 198
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ M + P+ T+ +++S CT NV G IHS+ +G ++ L AL+++YSKC
Sbjct: 199 NEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC 258
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G +E+A +F ++ K++ SW +I G A A+ +F +M++ G P+ ++ +IL
Sbjct: 259 GEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSIL 318
Query: 311 SACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
AC+HLG +D G+ Y D+ ++ I ++DM + G IE A +
Sbjct: 319 PACAHLGAIDIGRWIHVYIDK--KLKGIITNTSLQTSLIDMYAKCGNIEAANQV 370
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 235/387 (60%), Gaps = 10/387 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N LIR+YA E+I + EM G+ PD T+P ++KAC G + +
Sbjct: 86 SWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKIQVDV 145
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GLD + Y+ NT++ Y +CK I A+ +F+EM R VVSW+++++ V + +D+
Sbjct: 146 MKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSF 205
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F +M+ + P+ T+V L+SAC+ L N+ G +HS + G+ ++ LGTALV+MY
Sbjct: 206 GLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMY 265
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V +A VF+ M E+N+ +W+ MI GLA +G A+ LF KM Q+ + P+ ++F
Sbjct: 266 AKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFL 325
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L ACSH GLVD+G +F +M V+ I+P M HYG MVD+L RAG ++EAY+ I NMP
Sbjct: 326 GVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPV 385
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLG------KLLLKLEPELGANYVLAASVSSLSGN 421
E + V+ R+ L AC HG ++DN G K LL+LEP N+V+ A++ + G
Sbjct: 386 EADPVVWRTLLSACTIHG----INDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGK 441
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
WD AA + + GL K+ G S ++V
Sbjct: 442 WDKAANVRRTMKDTGLKKMAGESCIEV 468
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 258/443 (58%), Gaps = 10/443 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDH----NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
++ +H ++H L+ LD +T ++ + ++ R++F+ +PV + +
Sbjct: 132 ARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCG---AVEAARAVFDCMPVRNSV-S 187
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I YA + E++ LF M++ G+ + + ++ACG + VH L+
Sbjct: 188 WNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV 247
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV-VSWSSMIAGFVACDSPSDAL 187
+VGL S+ + N L+ YA CK D+A VF E+ + +SW++MI GF + P DA
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F RM+L N P+S TLVS++ A + + IH Y++ + L+ DV + TAL++MY
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMY 367
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG V A ++F+ R++++ +W MI G +G G A+ LF +M TG P+ +F
Sbjct: 368 SKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFL 427
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L+ACSH GLVDEG+ YF M + Y ++P MEHYG MVD+LGRAG ++EA+ I+NMP
Sbjct: 428 SVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPI 487
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP + + LGAC+ H V L + +++ +L PE G +VL A++ + + W A
Sbjct: 488 EPGISVYGAMLGACKLHKNV-ELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVAR 546
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ A+ +KGL K PG S +++ +
Sbjct: 547 VRTAMEKKGLQKTPGWSIIQLKN 569
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 2/232 (0%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
T+ ++K C + G +VH+ + GL S+ L MY C+ A+ VF+ M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMK--LANESPNSVTLVSLVSACTSLINVRA 220
P RD V+W++++AG+ PS A++ RM+ E P+SVTLVS++ AC + A
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
+H++A+ GL+ V + TA+++ Y KCG VE A VF+ M +N SW MI G AD
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
NG A++LF +M+Q G+ S A L AC LG +DE + + + RV
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 132/266 (49%), Gaps = 4/266 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKAC 111
R +F+ +P + A+N ++ YA+ +++ M + G RPD+ T V+ AC
Sbjct: 71 RRVFDRMP-SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ VH+ + GLD + +L Y C ++ A+AVF+ MPVR+ VSW+
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+MI G+ + ++A+ +F RM ++++ + AC L + +H V
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ-SWTIMISGLADNGRGNYAISL 290
GL +V++ AL+ Y+KC + A +VFN + K + SW MI G N A L
Sbjct: 250 GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERL 309
Query: 291 FAKMIQTGLKPDSISFSAILSACSHL 316
FA+M ++PDS + +++ A + +
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADI 335
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 265/458 (57%), Gaps = 11/458 (2%)
Query: 6 IETLIQLSKTVHH---LHQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFN 58
+ET+I K+V H L Q+H ++T+L + +SR L+ +++ F
Sbjct: 3 LETVISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFG 62
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
L P + YNT+IRA + + + + L+ +M + G+ D + F VK+C R L +
Sbjct: 63 QLS-HPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLP 121
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH IFK G D + ++ +Y+ C+ A VF+EMP RD V+W+ MI+ +
Sbjct: 122 GGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCI 181
Query: 179 ACDSPSDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+ DAL +F M+ ++ P+ VT + L+ AC L + GE IH Y + G
Sbjct: 182 RNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDA 241
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ L +L+ MYS+CG ++KA++VF M KN+ SW+ MISGLA NG G AI F +M++
Sbjct: 242 LNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLR 301
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+ PD +F+ +LSACS+ G+VDEG ++F M+R + + P + HYGCMVD+LGRAGL++
Sbjct: 302 IGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLD 361
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
+AY +I +M +P++ + R+ LGACR HG V + +G L++L+ + +YVL ++
Sbjct: 362 KAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGH-LIELKAQEAGDYVLLLNIY 420
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
S +G+W+ AE+ + K + PGCS +++ E
Sbjct: 421 SSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHE 458
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 244/425 (57%), Gaps = 33/425 (7%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LFN + + +++ LI Y + E++ +F EM G+R D V+ AC
Sbjct: 260 LFNEMD-EKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLS 318
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA--------------------------- 148
++ G +H L+ ++G++S + N L+ MY+
Sbjct: 319 IVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMIS 378
Query: 149 ----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
C ++ A+A+F+ MP +D+VSWS++I+G+ D S+ L +FH M+L P+
Sbjct: 379 GCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETI 438
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVS++SACT L + G+ +H+Y NGL+++V LGT L++MY KCG VE A +VFN M
Sbjct: 439 LVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME 498
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
EK + SW +I GLA NG ++ +F++M G+ P+ I+F +L AC H+GLVDEG+
Sbjct: 499 EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRC 558
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+F M + I+P ++HYGCMVD+LGRAGL+ EA +I +MP P+ + LGAC+ H
Sbjct: 559 HFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKH 618
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G + + +G+ L++L+P+ +VL +++ + G+W+ E+ + Q+G+ K PGCS
Sbjct: 619 GDT-EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCS 677
Query: 445 WVKVN 449
++ N
Sbjct: 678 LIEAN 682
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 188/390 (48%), Gaps = 54/390 (13%)
Query: 10 IQLSKTVHHLHQLHTL---------FLKTSLDHNTCIISR---FILTSLSISLHFTRSLF 57
I LS HLH H L + T +T SR F S I L ++ +F
Sbjct: 39 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 98
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + + F +NT++RAY +++ + +++ L+ M+K + PDN+TYP VV+AC LL
Sbjct: 99 DRIENSNG-FMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 157
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G +H + KVG DSD Y+ NTL+ MYA C + A+ +F+E PV D VSW+S++AG+
Sbjct: 158 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 217
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
V +A +F +M N + A S+I V
Sbjct: 218 VKKGDVEEAKLIFDQMPQRN-----------IVASNSMI--------------------V 246
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
LG K G V +A+K+FN M EK++ SW+ +ISG NG A+ +F +M
Sbjct: 247 LLG--------KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 298
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G++ D + ++LSAC+HL +V GK + R+ I+ + ++ M +G I +
Sbjct: 299 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM-GIESYVNLQNALIHMYSGSGEIMD 357
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
A + N + + S + C G V
Sbjct: 358 AQKLF-NGSHNLDQISWNSMISGCMKCGSV 386
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R+LF+ +P + +++ +I YA+ C E++ LF EM +RPD V+
Sbjct: 385 SVEKARALFDVMP-EKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVI 443
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH+ I K GL + +G TLL MY C ++ A VF M + V
Sbjct: 444 SACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS 503
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE-SIHSY 227
SW+++I G +L +F MK PN +T + ++ AC + V G S
Sbjct: 504 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNY 286
+G+E +V +V++ + G + +A K+ M ++ +W ++ +G
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623
Query: 287 AISLFAKMIQTGLKPDSISFSAILS 311
+ K+I+ L+PD F +LS
Sbjct: 624 GERVGRKLIE--LQPDHDGFHVLLS 646
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 261/474 (55%), Gaps = 45/474 (9%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ Q+H ++ L + ++++ I LT + + + L P F + +IR
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS-LIFKVGLDS 134
YA ES + M + G+ P +FT+ + KACG L + +G VH+ I G S
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEM-------------------------------P 163
D Y+GN+++ +Y C + A+ VF+EM P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
++D+V+W++M+ G+ P +AL+ F +M+ + VTL ++SAC L V+
Sbjct: 237 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 224 IHSYAVVNGL--ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
I A +G +V +G+AL++MYSKCG ++A+KVF +M+E+N+ S++ MI G A +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GR + A+ LF M++T ++P+ ++F ILSACSH GLV++G+ F +M + + + P+ +H
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDH 416
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL---- 397
Y CMVD+LGRAG +EEA +++ MP EPN + + LGACR HG + ++ ++
Sbjct: 417 YACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG-----NPDIAQIAANE 471
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
L KLEP NY+L +++ + +G W+ ++L I +KG K PGCSW + +G
Sbjct: 472 LFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNG 525
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 44/312 (14%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA-----VFEEMPVRDVV 168
C L VH+ I + GL Y+ L+RM ++DV VF ++ +
Sbjct: 52 CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT---KVDVPMGSYPLLVFGQVNYPNPF 108
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W++MI G+ S++ + RM+ P S T +L AC + +N+ G+ +H+
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168
Query: 229 V-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE---------------------- 265
+ + G D+ +G +++++Y KCG + A KVF+ M E
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 266 ---------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
K++ +WT M++G A NGR A+ F KM G++ D ++ + ++SAC+ L
Sbjct: 229 SGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
G V N+ ++A P+ ++DM + G +EAY + M E N
Sbjct: 289 GAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM-KERNVFSY 346
Query: 375 RSFLGACRNHGQ 386
S + HG+
Sbjct: 347 SSMILGYAMHGR 358
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 251/433 (57%), Gaps = 1/433 (0%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ L +LH + L N + + FI + +L T + ++N L+
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCG 382
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
YA+ S +++ L+ +M +GL PD FT ++ AC R + G +H + GL D
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+IG +LL +Y C + A+ +F+ M R +VSW+ MIAG+ P +A+ +F +M
Sbjct: 443 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
P + ++ + AC+ L +R G+ +H +A+ L D+ + +++++MY+K G +
Sbjct: 503 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 562
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+ ++F+ +REK++ SW ++I+G +GRG A+ LF KM++ GLKPD +F+ IL ACSH
Sbjct: 563 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 622
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
GLV++G YF++M ++NI+P +EHY C+VDMLGRAG I++A +I MP +P++ I
Sbjct: 623 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWS 682
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
S L +CR HG L L + + LL+LEPE NYVL +++ + SG WD + +
Sbjct: 683 SLLSSCRIHGN-LGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 741
Query: 436 GLNKVPGCSWVKV 448
GL K GCSW++V
Sbjct: 742 GLQKDAGCSWIEV 754
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 163/310 (52%), Gaps = 12/310 (3%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
I++ + +H + T F + NT II+ + S+ S +R +F+ L LF +
Sbjct: 14 IEVGRRLHEMVSASTQFCNDFV-LNTRIITMY---SMCGSPSDSRMVFDKLR-RKNLFQW 68
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N ++ AY + +++ +F E++ T +PDNFT P V+KAC L +G+G +H +
Sbjct: 69 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 128
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+ L SD ++GN L+ MY C ++ A VFE MP R++VSW+S+I GF ++
Sbjct: 129 KMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFN 188
Query: 189 VFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
F M + ES P+ TLV+++ C ++ G ++H AV GL ++ + +L++M
Sbjct: 189 AFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDM 248
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT---GLKPDS 303
YSKC + +A +F+ +KN+ SW MI G A L KM QT +K D
Sbjct: 249 YSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKM-QTEDAKMKADE 307
Query: 304 ISFSAILSAC 313
+ +L C
Sbjct: 308 FTILNVLPVC 317
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 140/265 (52%), Gaps = 5/265 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGR 113
+F ++P L ++N++I +++ ES F EML + PD T V+ C
Sbjct: 158 VFEHMP-ERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG 216
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I G +VH L K+GL+ + + N+L+ MY+ C+ + A+ +F++ +++VSW+SM
Sbjct: 217 EEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSM 276
Query: 174 IAGFVACDSPSDALKVFHRMKL--ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
I G+ + + +M+ A + T+++++ C +++ + +H Y+ +
Sbjct: 277 IGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRH 336
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
GL+ + + A + Y++CG + + +VF+LM K + SW ++ G A N A+ L+
Sbjct: 337 GLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 396
Query: 292 AKMIQTGLKPDSISFSAILSACSHL 316
+M +GL PD + ++L ACS +
Sbjct: 397 LQMTDSGLDPDWFTIGSLLLACSRM 421
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 208 LVSACTSLINVRAGESIHSY-AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
L+ AC ++ G +H + D L T ++ MYS CG + VF+ +R K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGLVDEG-KN 324
NL W ++S N A+S+F+++I T KPD+ + ++ AC+ GL+D G
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQ 121
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
MA ++ + ++ M G+ GL+EEA + +MP E N V S + +
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICGFSEN 180
Query: 385 G 385
G
Sbjct: 181 G 181
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 235/387 (60%), Gaps = 10/387 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N LIR+YA E+I + EM G+ PD T+P ++KAC G + +
Sbjct: 727 SWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKIQVDV 786
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GLD + Y+ NT++ Y +CK I A+ +F+EM R VVSW+++++ V + +D+
Sbjct: 787 MKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSF 846
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F +M+ + P+ T+V L+SAC+ L N+ G +HS + G+ ++ LGTALV+MY
Sbjct: 847 GLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMY 906
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V +A VF+ M E+N+ +W+ MI GLA +G A+ LF KM Q+ + P+ ++F
Sbjct: 907 AKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFL 966
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L ACSH GLVD+G +F +M V+ I+P M HYG MVD+L RAG ++EAY+ I NMP
Sbjct: 967 GVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPV 1026
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLG------KLLLKLEPELGANYVLAASVSSLSGN 421
E + V+ R+ L AC HG ++DN G K LL+LEP N+V+ A++ + G
Sbjct: 1027 EADPVVWRTLLSACTIHG----INDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGK 1082
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
WD AA + + GL K+ G S ++V
Sbjct: 1083 WDKAANVRRTMKDTGLKKMAGESCIEV 1109
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 258/429 (60%), Gaps = 5/429 (1%)
Query: 23 HTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K LD + + I + + + F R +F+ + L ++N++I Y+K
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMG-DRDLVSWNSMISGYSKMGF 209
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
+ E+I LF EM + G PD T V+ ACG +G+G V + + ++ + Y+G+
Sbjct: 210 TKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSA 269
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
L+ MY C ++ A+ VF+ MP +DVV+W+++I G+ + ++A+ +F+ M+ A P+
Sbjct: 270 LIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPD 329
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
VT++ ++SAC+++ + G+ + ++A GL+ DV + +AL++MY+KCG ++ A +VF
Sbjct: 330 RVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFE 389
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG--LKPDSISFSAILSACSHLGLV 319
M KN SW MIS LA +G+ A+SLF +M + ++P+ I+F +LSAC H GLV
Sbjct: 390 SMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLV 449
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG+ F+ M + + P +EHY CMVD+ RAGL+ EA+ +I+ MP +P+ ++L S LG
Sbjct: 450 DEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLG 509
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ + + + +L L++E NYV+++ + + WD +A++ V + Q G++K
Sbjct: 510 ACQRRRNA-DVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSK 568
Query: 440 VPGCSWVKV 448
PGCSW+ +
Sbjct: 569 TPGCSWIDI 577
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 217/386 (56%), Gaps = 7/386 (1%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
++ + +LI+ K+ + L Q+H L S+ ++S+ I L + +FN L
Sbjct: 32 LTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLK---DLAYASLVFNQL- 87
Query: 62 VTPPLFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P ++A+N ++R A T + ++L+ ++ GL+ +NFTYPF+ ACG + G
Sbjct: 88 TKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHG 147
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
H L+FK GLD D+Y+ ++L+ MYA C E+ A+ VF+EM RD+VSW+SMI+G+
Sbjct: 148 KIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKM 207
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+A+ +F M+ P+ +TLVS++ AC L ++ G + + + +E++ +G
Sbjct: 208 GFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMG 267
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
+AL++MY KCG + A +VF+ M K++ +W +I+G A NG N AI LF M + G
Sbjct: 268 SALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPH 327
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD ++ +LSACS +G +D GK + + A ++ + ++DM + G +++A
Sbjct: 328 PDRVTMIEVLSACSTIGALDLGK-WVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVR 386
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQ 386
+ +MP + N V + + A HGQ
Sbjct: 387 VFESMPHK-NEVSWNAMISALAFHGQ 411
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 267/460 (58%), Gaps = 20/460 (4%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNN 59
+R I +L+Q ++ LH++H L HN I + F S+S SL + + +F+
Sbjct: 23 ARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHR 82
Query: 60 L--PVTPPLFAYNTLIRAYAKTSC--SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRC 114
+ P TP A+N++IR ++++ +++I ++ ML RPD +T+ F++KAC
Sbjct: 83 IHNPQTP---AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEA 139
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G VH I + G D D + L+R YA I+ A VFEEMP RD+VSW+SMI
Sbjct: 140 KEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMI 199
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ + +ALK++ +M+++N + TLVSL+S+C + + G +H +A L
Sbjct: 200 SCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLV 259
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++ +G AL++MY+KCG + A +FN M ++++ +W MI G +GRG+ AI+ F M
Sbjct: 260 ENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSM 319
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G++P+SI+F +L CSH GLV EG YF M+ +N+KP ++HYGCMVD+ GRAG
Sbjct: 320 LMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGK 379
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYV 410
++EA +IR+ P++ + V+ R+ LG+C+ H V +G++ ++ +LG+ + V
Sbjct: 380 LKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNV-----EIGEMAMRNLVQLGSLGAGDCV 434
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L + + + + + A + I +G+ PG SW++V D
Sbjct: 435 LLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGD 474
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 267/460 (58%), Gaps = 20/460 (4%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNN 59
+R I +L+Q ++ LH++H L HN I + F S+S SL + + +F+
Sbjct: 5 ARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHR 64
Query: 60 L--PVTPPLFAYNTLIRAYAKTSC--SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRC 114
+ P TP A+N++IR ++++ +++I ++ ML RPD +T+ F++KAC
Sbjct: 65 IHNPQTP---AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEA 121
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G VH I + G D D + L+R YA I+ A VFEEMP RD+VSW+SMI
Sbjct: 122 KEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMI 181
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ + +ALK++ +M+++N + TLVSL+S+C + + G +H +A L
Sbjct: 182 SCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLV 241
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++ +G AL++MY+KCG + A +FN M ++++ +W MI G +GRG+ AI+ F M
Sbjct: 242 ENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSM 301
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G++P+SI+F +L CSH GLV EG YF M+ +N+KP ++HYGCMVD+ GRAG
Sbjct: 302 LMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGK 361
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYV 410
++EA +IR+ P++ + V+ R+ LG+C+ H V +G++ ++ +LG+ + V
Sbjct: 362 LKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNV-----EIGEMAMRNLVQLGSLGAGDCV 416
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L + + + + + A + I +G+ PG SW++V D
Sbjct: 417 LLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGD 456
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 274/504 (54%), Gaps = 74/504 (14%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTS---------LSISLHFTRSLFNNLPVTPPL 66
V L Q+H L + L N + + +LT+ S + + +F +P P
Sbjct: 14 VGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIP-QPDT 72
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------------GR 113
F +NT IR +++ + ++ L+ +M + ++PDNFT+PFV+KAC GR
Sbjct: 73 FMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGR 132
Query: 114 CLLIGIGGSV----HSLIF-------KVGLD----SDK---------------------- 136
L +G G +V L+F KV D SDK
Sbjct: 133 VLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVA 192
Query: 137 ------------YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
N ++ +Y E++ A+ +F+E P++D+VSW+++I G+V +
Sbjct: 193 RKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNR 252
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTAL 243
+AL++F M E P+ VT++SL+SAC L ++ +GE +H+ + +N +L LG AL
Sbjct: 253 EALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNAL 312
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY+KCG++ KA +VF L+R+K++ SW +ISGLA +G ++ LF +M T + PD
Sbjct: 313 VDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDE 372
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F +L+ACSH G VDEG YF M Y I+PT+ H GC+VDMLGRAGL++EA++ I
Sbjct: 373 VTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIA 432
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+M EPNA++ RS LGAC+ HG V L + LL++ + +YVL ++V + G WD
Sbjct: 433 SMKIEPNAIVWRSLLGACKVHGDV-ELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWD 491
Query: 424 TAAELMVAINQKGLNKVPGCSWVK 447
A + ++ G+ K G S+V+
Sbjct: 492 GAENVRKLMDDNGVTKNRGSSFVE 515
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 16/291 (5%)
Query: 107 VVKACGRCLLIGIG--GSVHSLIFKVGLDSD-----KYIGNTLLRMY---AACKEIDVAK 156
+ K GR + +G +H+L+ GL S+ K + T + M A I A
Sbjct: 2 IRKRRGRSTITNVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYAL 61
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
+F ++P D W++ I G P A+ ++ +M + P++ T ++ ACT L
Sbjct: 62 QMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLF 121
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
V G ++H + G +V + L+ ++KCG ++ A +F+ + ++ +W+ +I+
Sbjct: 122 WVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIA 181
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G A G + A LF +M K D +S++ +++ + G ++ + FDE +
Sbjct: 182 GYAQRGDLSVARKLFDEMP----KRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVS 237
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
G ++ L R L E + + + P+ V + S L AC + G +
Sbjct: 238 WNALIGGYVLRNLNREAL--ELFDEMCGVGECPDEVTMLSLLSACADLGDL 286
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 247/385 (64%), Gaps = 11/385 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+NT+IR Y+++ E+I L+ M+ G+ P +NFT+PF++ +C R + G VHS I
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G +SD ++ N L+ +Y+ +++A+ +F+E VRD+VS+++MI G+ + P AL
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEM 246
+F M+ ++E VTLV+++SAC L G+ ++ + NG+ + L A+++M
Sbjct: 122 CLFGEMQNSDE----VTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 247 YSKCGHVEKAFKVFNLMREKNLQS---WTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
Y+KCG ++ A ++F + KN+++ + MI+GLA +G G AI++F ++I TGLKPD
Sbjct: 178 YAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 236
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F +L AC H GL++EGK F+ M Y IKP MEHYGCMVD+LGR G +EEAY +++
Sbjct: 237 VTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQ 296
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP E N+VI R+ L ACR HG V + + G+ LL++E + GA YVL +++ + + W+
Sbjct: 297 KMPFEANSVIWRALLSACRTHGNV-KIGEIAGQKLLEMEAQHGARYVLLSNILADANQWE 355
Query: 424 TAAELMVAINQKGLNKVPGCSWVKV 448
A ++ + G+ K PG S++++
Sbjct: 356 EARQVRKVMEDHGIRKPPGWSYIEL 380
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 11/269 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
H++H+ +K + + + + I L S+ +L+ R+LF+ + L +YNT+I+ YA+
Sbjct: 55 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLVSYNTMIKGYAE 113
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKY 137
+ ++ LF EM + D T V+ AC R +G ++ + G + +
Sbjct: 114 VNQPESALCLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 169
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+ ++ MYA C ID A +F + ++ ++SMIAG A+ VF +
Sbjct: 170 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 229
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESI-HSYAVVNGLELDVALGTALVEMYSKCGHVE 254
P+ VT V ++ AC + G+ + S G++ + +V++ + G +E
Sbjct: 230 TGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLE 289
Query: 255 KAFKVFNLMR-EKNLQSWTIMISGLADNG 282
+A+ + M E N W ++S +G
Sbjct: 290 EAYDLVQKMPFEANSVIWRALLSACRTHG 318
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 250/406 (61%), Gaps = 16/406 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P+ + ++N +I YA+T ++++LF EM+KT ++PD T VV AC +
Sbjct: 161 QKMFDEIPIKD-VVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQ 219
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VHS I G S+ I N L+ +Y+ C E++ A + E + +DV+SW+++
Sbjct: 220 SGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTL 279
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 280 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 339
Query: 232 GLELDVA--LGTALVEMYSKCGHVEKAFKV-----FNLMREKNLQSWTIMISGLADNGRG 284
G+ + A L T+L++MY+KCG ++ A +V FN ++L +W MI G A +GR
Sbjct: 340 GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN----RSLSTWNAMIFGFAMHGRA 395
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
N A +F++M + G++PD I+F +LSACSH G++D G+N F M + YNI P +EHYGC
Sbjct: 396 NAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGC 455
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
M+D+LG +GL +EA +I MP EP+ VI S L AC+ HG L L ++ K L+K+EPE
Sbjct: 456 MIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN-LELGESFAKKLIKIEPE 514
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGL-NKVPGCSWVKVN 449
+YVL +++ + +G W+ ++ +N KG+ KVPGCS ++++
Sbjct: 515 NPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEID 560
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 179/354 (50%), Gaps = 35/354 (9%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
IL+ L + S+F +P P +N + R +A +S + ++KL+ M+ GL P+
Sbjct: 17 ILSPHFDGLPYAISVFETIP-EPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNF 75
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------- 151
FT+PF++K+C + G +H + K+G D D Y+ +L+ MYA
Sbjct: 76 FTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDR 135
Query: 152 ---------------------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
I+ A+ +F+E+P++DVVSW++MI+G+ + AL++F
Sbjct: 136 SSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELF 195
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M N P+ T+ ++VSAC ++ G +HS+ +G ++ + AL+++YSKC
Sbjct: 196 KEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC 255
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G VE A ++ + K++ SW +I G A+ LF +M+++G P+ ++ +IL
Sbjct: 256 GEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 315
Query: 311 SACSHLGLVDEGKN---YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
AC+HLG +D G+ Y D+ + + ++DM + G I+ A +
Sbjct: 316 PACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV 369
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 260/452 (57%), Gaps = 16/452 (3%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV-----TPP 65
Q + ++HHL Q H L L+T ++ I + + ++S + S ++L V P
Sbjct: 63 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 122
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +N +I+ + + ++I L+ EM+ RP+ +TYP V+KAC ++ G VH+
Sbjct: 123 VFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHA 182
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPS 184
+ K GL D +I ++ +RMYA+ + A+ + ++ D V F+
Sbjct: 183 HLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFM------ 236
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL++FH+M+ P L S++SAC +L + G IH+YA N ++LD LGT+LV
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 296
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG ++ A++VF M K + SW MI GLA +GR AI LF+KM + P+ I
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEI 353
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L+AC+H GLV +G F+ M + Y ++P +EHYGC+VD+LGRAGL+ EA ++ +
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 413
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
+PTEP + + LGACR HG V L + +GK+LL+LEP+ Y L +++ + +G W+
Sbjct: 414 IPTEPTPAVWGALLGACRKHGNV-ELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEE 472
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
E+ + ++G+ PG S + + G +
Sbjct: 473 VGEVRKLMKERGIKTTPGTSIIDLGRGEVHKF 504
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 240/395 (60%), Gaps = 2/395 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + V + ++ T+I AYA+ E+IKLF M ++P+ T V+ AC R
Sbjct: 192 RKVFDKM-VNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACAR 250
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ VH I + G+ + + L+ +Y C +A+ +F +MP +++ W+ M
Sbjct: 251 SRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIM 310
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G V +AL +F+ M+L+ + VT+ SL+ ACT L + G+ +H Y +
Sbjct: 311 INGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI 370
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E+DVALGTALV+MY+KCG +E A +VF M EK++ +WT +I GLA G+G A+ LF +
Sbjct: 371 EVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHE 430
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + +KPD+I+F +L+ACSH GLV+EG YF+ M Y I+P++EHYGCMVDMLGRAG
Sbjct: 431 MQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAG 490
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
I EA +I+NMP P+ +L L ACR HG L + + + L++L+P+ G YVL +
Sbjct: 491 RIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN-LVVAERAAQQLIELDPKNGGTYVLLS 549
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
++ S NW+ A ++ + ++ + K PGCS ++V
Sbjct: 550 NIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEV 584
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 201/365 (55%), Gaps = 10/365 (2%)
Query: 9 LIQLSK--TVHHLHQLHTLFLKTSL---DHNTCIISRFILTSLSISLHFTRSLFNNLPVT 63
L+ L K T+ L Q+H L+T L + I F S SL + R +FN +P
Sbjct: 44 LLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIP-N 102
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F N++IR Y + ++I + M+ GL PD FT+P + K+CG ++ G +
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQL 159
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H K+G SD YI NTL+ MY+ C + A+ VF++M + VVSW++MI + D P
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A+K+F RM++A+ PN +TLV++++AC ++ + +H Y G+ L +AL
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+++Y KCG A +FN M EKNL W IMI+G ++ A+SLF +M +G+K D
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++ +++L AC+HLG ++ GK + I+ + +VDM + G IE A + +
Sbjct: 340 VTMASLLIACTHLGALELGK-WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 398
Query: 364 NMPTE 368
MP +
Sbjct: 399 EMPEK 403
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 275/527 (52%), Gaps = 99/527 (18%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLI 73
+ QLH LKT++ ++ + SR + + I+ L + RS+F+ + L +NT+I
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ-RRSLIHWNTII 85
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-- 131
+ Y + S + I LF E++ L PDNFT P V+K C R ++ G +H L K+G
Sbjct: 86 KCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144
Query: 132 -----------------------------LDSDKYIGNTLLRMYAACKEIDVA------- 155
+D D + N+L+ YA C EID+A
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM 204
Query: 156 ------------------------KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+ +F++MP R++VSW++MI G++ AL++F+
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFY 264
Query: 192 RMKLAN-------------------------------ESPNSVTLVSLVSACTSLINVRA 220
+M + + P+ TLVS++SA + L +
Sbjct: 265 QMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGK 324
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IHSY NG ELD LGT+L+EMY+KCG +E A VF +++K + WT +I GL
Sbjct: 325 GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGI 384
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G N+A++LF +M +TGLKP++I F +L+AC+H GLVD+G+ YFD M Y I+PT+E
Sbjct: 385 HGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE 444
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGC+VD+L RAG +EEA + I NMP PN VI S LG RNHG++ + + + +++
Sbjct: 445 HYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKI-DIGEYAAQRVIE 503
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ PE Y+L +++ + SG W+ + + + ++G K PGCS V+
Sbjct: 504 VAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVE 550
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 262/470 (55%), Gaps = 40/470 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L +H L + +L H+ +++ RF S + LH+ LF+ + P F YNT
Sbjct: 7 TMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIH-QPNTFFYNT 65
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL----LIGIGGSVHSLI 127
LIR Y+K+S +S++LF++M + + PD FT+ F++K R LI +H +
Sbjct: 66 LIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAV 125
Query: 128 FKVGLDSDKYIGNTLLRMYAA-------------------------------CKEIDVAK 156
K+G ++ N L+ +YAA E+++A+
Sbjct: 126 LKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELAR 185
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
VF EMP RDVVSW+ M++G+ +AL++F M+ P+ V +VS++SACTSL
Sbjct: 186 QVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLG 245
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
++ G +H Y NG V+L AL++MY+KCG ++ A++VFN M K+L +W MIS
Sbjct: 246 DLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMIS 305
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
A++G A +F M+ +G++PD ++F A+L+A +H G VD+G F+ M R Y ++
Sbjct: 306 ACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVE 365
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
+EHYGCMVDMLGRAG +EEAY +I +M N V+ + L ACR +G V + + + K
Sbjct: 366 AGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDV-EMGERVLK 424
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
L++L+P+ G Y+L + +G A EL A++ G K GCSWV
Sbjct: 425 KLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 245/417 (58%), Gaps = 18/417 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L R +F+ V L ++N++I Y + + E++ + EM G++PD T VV
Sbjct: 129 DLDGARKMFDKSCVRD-LVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 187
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE-------- 160
+C + + +G H I + GL + N L+ MY C ++ A+ +F+
Sbjct: 188 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 247
Query: 161 --------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
EMP +DVV W++MI G+V + +AL +F+ M+ N +P+ VT+VS +SAC
Sbjct: 248 SWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSAC 307
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
+ L + G IH Y + L L+VALGTAL++MY+KCG + KA +VF + +N +WT
Sbjct: 308 SQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWT 367
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+ISGLA +G + AI+ F++MI + PD ++F +LSAC H GLV+EG+ YF +M+
Sbjct: 368 AIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSK 427
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
+N+ P ++HY CMVD+LGRAGL+EEA +I++MP E +AV+ + ACR HG VL + +
Sbjct: 428 FNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL-MGE 486
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LL+++P YVL A++ + W A + + Q+G+ K PGCS ++VN
Sbjct: 487 RAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVN 543
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 185/353 (52%), Gaps = 27/353 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKAC 111
T LFN P F++N IR + + E++ L+ +L+ G +PDN+TYP + KAC
Sbjct: 32 TNILFNTR--NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKAC 89
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
R LI +G + + +G DSD ++ N ++ + +C ++D A+ +F++ VRD+VSW+
Sbjct: 90 ARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWN 149
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
SMI G+V +AL + MK+ P+ VT++ +VS+C L ++ G H Y N
Sbjct: 150 SMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN 209
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI----------------MI 275
GL+L V L AL++MY KCG++E A K+F+ M K + SWT MI
Sbjct: 210 GLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMI 269
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDEMARV 332
G RG A++LF +M + PD ++ + LSACS LG +D G +Y ++
Sbjct: 270 GGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 329
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
N+ ++DM + G I +A + + +P N++ + + HG
Sbjct: 330 LNVALGT----ALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHG 377
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 259/474 (54%), Gaps = 45/474 (9%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ Q+H ++ L + ++++ I LT + + + L P F + +IR
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS-LIFKVGLDS 134
YA ES + M + G+ P +FT+ + KACG L + +G VH+ I G S
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS----------------------- 171
D Y+GN+++ +Y C + A+ VF+EM RDVVSW+
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 172 --------SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+M+ G+ P +AL+ F +M+ + VTL ++SAC L V+
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 224 IHSYAVVNGL--ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
I A +G +V +G+AL++MYSKCG ++A+KVF +M+E+N+ S++ MI G A +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GR + A+ LF M++T ++P+ ++F ILSACSH GLV++G+ F +M + + + P+ +H
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDH 416
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL---- 397
Y CMVD+LGRAG +EEA +++ MP EPN + + LGACR HG + ++ ++
Sbjct: 417 YACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG-----NPDIAQIAANE 471
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
L KLEP NY+L +++ + +G W+ ++L I +KG K PGCSW + +G
Sbjct: 472 LFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNG 525
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 44/312 (14%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA-----VFEEMPVRDVV 168
C L VH+ I + GL Y+ L+RM ++DV VF ++ +
Sbjct: 52 CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLT---KVDVPMGSYPLLVFGQVNYPNPF 108
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W++MI G+ S++ + RM+ P S T +L AC + +N+ G+ +H+
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168
Query: 229 V-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE---------------------- 265
+ + G D+ +G +++++Y KCG + A KVF+ M E
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 266 ---------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
K++ +WT M++G A NGR A+ F KM G++ D ++ + ++SAC+ L
Sbjct: 229 SGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
G V N+ ++A P+ ++DM + G +EAY + M E N
Sbjct: 289 GAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM-KERNVFSY 346
Query: 375 RSFLGACRNHGQ 386
S + HG+
Sbjct: 347 SSMILGYAMHGR 358
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 234/380 (61%), Gaps = 2/380 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +LI AYA+ S E+I+LF EM + G+ PD FT V+ AC + G VH+ I
Sbjct: 67 WTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIR 126
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + S+ ++ N L+ MYA C ++ A +VF EMPV+D++SW++MI G+ P++AL
Sbjct: 127 ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALS 186
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M L + P+ TL ++ AC SL ++ G+ +H + + NG D + ALV+MY
Sbjct: 187 LFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYV 245
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG A +F+++ K+L +WT+MI+G +G GN AI+ F +M Q G++PD +SF +
Sbjct: 246 KCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFIS 305
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
IL ACSH GL+DEG +F+ M N+KP +EHY C+VD+L R+G + AY I++MP E
Sbjct: 306 ILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIE 365
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A I + L CR H V L + + + + +LEPE YVL A+ + + W+ +L
Sbjct: 366 PDATIWGALLSGCRIHHDV-KLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKL 424
Query: 429 MVAINQKGLNKVPGCSWVKV 448
I ++GL K PGCSW++V
Sbjct: 425 RQKIGRRGLKKNPGCSWIEV 444
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 2/262 (0%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++AC C + +G +VH K + NTLL MYA C +D A VF+ M VR
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VV+W+S+IA + +A+++FH M SP+ T+ +++ AC ++ G+ +H+
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
Y N ++ ++ + AL++MY+KCG +E A VF M K++ SW MI G + N N
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+SLF M+ +KPD + + IL AC+ L +D GK + R + +V
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILR-NGFFSDQQVANALV 241
Query: 347 DMLGRAGLIEEAYHIIRNMPTE 368
DM + G+ A + +PT+
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTK 263
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ S+F +PV + ++NT+I Y+K S E++ LF +M+ ++PD T ++
Sbjct: 149 SMEDANSVFLEMPVKD-IISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACIL 206
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH I + G SD+ + N L+ MY C +A+ +F+ +P +D++
Sbjct: 207 PACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLI 266
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W+ MIAG+ ++A+ F+ M+ A P+ V+ +S++ AC+ HS
Sbjct: 267 TWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS-----------HS-- 313
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-----NLQSWTIMISGLADNGR 283
G +++ ++ FN+M+++ L+ + ++ LA +G+
Sbjct: 314 ----------------------GLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGK 351
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSAC-------------SHL-GLVDEGKNYFDEM 329
A M ++PD+ + A+LS C H+ L E Y+ +
Sbjct: 352 LAMAYKFIKSM---PIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLL 408
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGL 354
A Y E + +GR GL
Sbjct: 409 ANTYAEAEKWEEVKKLRQKIGRRGL 433
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+VS++ AC + +V G ++H V + L++MY+KCG ++ A VF+LM
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+ + +WT +I+ A G + AI LF +M + G+ PD + + +L AC+ G ++ GK+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + R +++ + ++DM + G +E+A + MP +
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK 163
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 266/503 (52%), Gaps = 77/503 (15%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
L Q+H + + N + I ++S ++++ +F + P +F +NT++R
Sbjct: 29 LKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQI-TEPDIFMWNTMMRG 87
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+++ + + L+ +M G++PD FT+ F++K C R G VH + K G + +
Sbjct: 88 SSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVN 147
Query: 136 KYIGNTLLRM-------------------------------YAACKEIDVAKAVFEEMPV 164
++ NTL+ YA E+ VA+ +F+EMPV
Sbjct: 148 SFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPV 207
Query: 165 RD-------------------------------VVSWSSMIAGFVACDSPSDALKVFHRM 193
+D VV+W++MIAG+V AL++F M
Sbjct: 208 KDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEM 267
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIH-SYAVVNGLELDVALGTALVEMYSKCGH 252
+ E P+ VT++SL+SAC L +++ G +H S + + +L V LG ALV+MY+KCG
Sbjct: 268 RNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGS 327
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILS 311
+E A +VF MREK++ +W +I GLA +G +I LFA+M +KP+ I+F ++
Sbjct: 328 IEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIV 387
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G V+EG+ YF M Y+I+P M H+GCMVD+LGRAGL+ EA+ +I M EPNA
Sbjct: 388 ACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNA 447
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+I R+ LGACR HG V LG+L LLKL + +YVL +++ + +G WD A E
Sbjct: 448 IIWRTLLGACRVHGNV-----ELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEE 502
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ ++ G+ K G S ++ +D
Sbjct: 503 VRKLMDDGGVRKEAGRSLIEADD 525
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 260/476 (54%), Gaps = 41/476 (8%)
Query: 14 KTVH-HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
K +H HL + HT+F + +C+IS I +L L + +F + P LF YN+
Sbjct: 32 KIIHAHLIRAHTIF---DVFAASCLISISINKNL---LDYAAQVFYQIQ-NPNLFIYNSF 84
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR ++ + +S + + + GL PDN TYPF+VKAC + + +G H I + G
Sbjct: 85 IRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGF 144
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSD Y+ N+L+ MY+ +I A VF + DVVSW+SM+AG++ + A K+F +
Sbjct: 145 DSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 193 MKLAN-------------------------------ESPNSVTLVSLVSACTSLINVRAG 221
M N N +VS++++C L + G
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
E H Y + N + +++ LGTALV+MY++CG ++KA VF+ + ++ SWT +I+G A +
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G A+ F++M + GL P I+F+A+LSACSH GLV+ G F+ M R Y I+P +EH
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEH 384
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCMVD+LGRAG + EA + MP +PNA I + LGACR H + + GK L++L
Sbjct: 385 YGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNS-EIAERAGKTLIEL 443
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
+PE YVL +++ + + W+ + + ++G+ K PG + ++ DG + +
Sbjct: 444 KPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEM-DGKVHKFT 498
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 270/468 (57%), Gaps = 36/468 (7%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
T+ L ++H+ +KT L +T SR + S + +++ +F + P +FA+NT+
Sbjct: 34 TMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQ-NPNIFAWNTI 92
Query: 73 IRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
IR ++++S SI L+ +ML T ++P TYP V KA + L G +H + K+G
Sbjct: 93 IRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLG 152
Query: 132 LDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAVFE 160
L++D +I NT+L MY A C +D ++ +F+
Sbjct: 153 LENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFD 212
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
+M +R+ VSW+SMI+G+V DAL++F +M++ P+ T+VSL++AC L +R
Sbjct: 213 KMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQ 272
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
GE IH Y V EL+ + TA+++MYSKCG ++KA +VF + L W MI GLA
Sbjct: 273 GEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAM 332
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG+ N A+ LF+ + + L+PD +SF A+L+AC H G+VD+ K+YF M Y IKP ++
Sbjct: 333 NGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIK 392
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
H+ CMVD+LGRAGL+EEA +IR+M +P+A+I S L +C +G + + L++
Sbjct: 393 HFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNI-KMAKRAANHLIE 451
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L P +++VL A+ + + N++ A + + + + + K PGCS ++V
Sbjct: 452 LNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEV 499
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 258/460 (56%), Gaps = 12/460 (2%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL--P 61
+H L++ S + Q LK+ L N +++R +S + + L L P
Sbjct: 43 QHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAAAAPALLEPLVAALLVP 102
Query: 62 VTP-PLFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
P F NTLIRA+A + S + + F ML++ P+ FT+PF++KAC
Sbjct: 103 SVPIDAFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACA--AFP 160
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYA--ACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
G+G H+ K G +D+Y+ NTL+ MY+ + + A+ VF+ M V+WS+MI
Sbjct: 161 GVGVQAHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIG 220
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V SDA+ +F M+ + P+ VT++ +++A L + + + G+
Sbjct: 221 GYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGK 280
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
V L AL++ +KCG ++ A VF M+E+ + SWT +I LA GRG A+++F +M
Sbjct: 281 SVTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMK 340
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
G++PD ++F +L+ACSH G+VDEG YF+ M Y I P +EHYGCMVDM GRAG++
Sbjct: 341 TAGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMV 400
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
E A + MP +PN +I R+ + ACR HG+ L L + + + LL P ANYV+ ++V
Sbjct: 401 ERAMEFVHKMPMKPNPIIWRTLVAACRAHGR-LELGETITRNLLNEYPAHEANYVMLSNV 459
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
+L+ W +E+ ++++G+ KVPGCS V++ DG E
Sbjct: 460 YALTRRWKEKSEIRREMSKRGIKKVPGCSLVEL-DGEVHE 498
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 263/453 (58%), Gaps = 20/453 (4%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
++ LH +K + N + FIL +S + + ++ P+ F YN +I
Sbjct: 12 VYNLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPYNAVI 71
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG---RCLLIGIGGSVHSLIFKV 130
R A + S+ ++ LF M +T + D+FT+P ++K+ C +H+L+ K+
Sbjct: 72 RHVALHAPSL-ALALFSHMHRTNVPFDHFTFPLILKSSKLNPHC--------IHTLVLKL 122
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G S+ Y+ N L+ Y + + +F+EMP RD++SWSS+I+ F P +AL +F
Sbjct: 123 GFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLF 182
Query: 191 HRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+M+L P+ V ++S++SA +SL + G +H++ G+ L V+LG+AL++MYS
Sbjct: 183 QQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYS 242
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG ++++ KVF+ M +N+ +WT +I+GLA +GRG A+ F M+++GLKPD I+F
Sbjct: 243 RCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMG 302
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH GLV+EG+ F M Y I+P +EHYGCMVD+LGRAG++ EA+ + M
Sbjct: 303 VLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVR 362
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
PN+VI R+ LGAC NH +L L + + + +L+P +YVL ++ GNW +
Sbjct: 363 PNSVIWRTLLGACVNH-NLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGV 421
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
++ + + K PG S V ++ + E +S + +
Sbjct: 422 RNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNS 454
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 266/447 (59%), Gaps = 18/447 (4%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILT--SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
+++LH +KT N + F LT + + + ++ LP P F+YNT+I+
Sbjct: 4 VYKLHATLIKTGQHQNPHSLRPFFLTCSNYPAAARYAATVLLRLPTPPDPFSYNTIIKHV 63
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ T +I LF M + + D+FT+P ++K LL SLIFK+G D++
Sbjct: 64 SPTG----AISLFSHMHRNSVPFDHFTFPLILKHHHHHLLH-------SLIFKLGFDTNI 112
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ N L+ Y + +DVA +F+EM RD+VSWS++I+ V + P++AL VF +M++
Sbjct: 113 FVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMG 172
Query: 197 NESP----NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
+ + ++S++SA +SL + G +HS+ V G+ + V LGTAL+ MYS+CG
Sbjct: 173 HRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGL 232
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++++ KVF+ M E+N+ +WT +I+GLA +GR A+ +F +M ++GLKPD F +L A
Sbjct: 233 IDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVA 292
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH GLV++G F+ M + IKP +EHYGCMVD+LGRAGLI EA+ + MP +PN+V
Sbjct: 293 CSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSV 352
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
I R+ LGAC NH L L + + +++L+P +YVL ++ GNW A L ++
Sbjct: 353 IWRTLLGACVNHNH-LGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSM 411
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEMSKE 459
Q + K PG S+V ++ E +S +
Sbjct: 412 KQNRIVKEPGLSFVHIDQVVHEFVSGD 438
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 264/481 (54%), Gaps = 42/481 (8%)
Query: 7 ETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL---SISLHFTRSLFNNL 60
+TLI L K++ L ++H L + + I S+ +L S + L ++ L N+
Sbjct: 14 QTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNV 73
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P P F +NTLIRA++ T SI +F +ML+ G+ PD TYPF+VKA + L +G
Sbjct: 74 P-NPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELG 132
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR--------------- 165
+VH I K G + DK+I N+L+ MYA+C++I A+ VF+EMP +
Sbjct: 133 MAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKC 192
Query: 166 ----------------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
DVVSWSS+I G+V +A+ +F RM N VTLVS +
Sbjct: 193 GDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSAL 252
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL--MREKN 267
AC L + G +H Y V N L L + L T+LV+MY+KCG + +A VF ++E +
Sbjct: 253 CACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEAD 312
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ W +I GLA +G A++LF +M G+ PD I++ +LS C+H GLV+E +FD
Sbjct: 313 VLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFD 372
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ R + + P +EHY CMVD L RAG + EAY + MP +P + +L + L C HG+
Sbjct: 373 CL-RKHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGK- 430
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L + +G+ L++L+P YV +++ + WD A + A+ +KG+ K PG S+++
Sbjct: 431 LDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIE 490
Query: 448 V 448
V
Sbjct: 491 V 491
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 244/432 (56%), Gaps = 2/432 (0%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H+HQ+ + +L NT I FI S+ L + L P +F N+LIRA++
Sbjct: 26 HIHQIQAQLIVQNLHSNTTIAHHFITACQSLGLLDSALLLFTHHSKPHVFICNSLIRAFS 85
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++ M + P+NFT+PF++K+ + G +H+ + K+G D Y
Sbjct: 86 HNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKGLSEGQCIHTHVVKLGQFDDIY 145
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+LL +YA+C ++ + VF+EMP RDVVSW+ +I G+ + + DAL F +M+ A
Sbjct: 146 VQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITGYRSAERYDDALIAFEQMQYAG 205
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
PN VT+V+ +SAC + G IH + +G E DV LGT+L++MY KCG +E+
Sbjct: 206 VVPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDMYGKCGRIEEGL 265
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF M+EKN+ +W +I GLA G A+ F +M Q G+K D ++ A+L ACSH G
Sbjct: 266 VVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEGIKADEVTLIAVLCACSHSG 325
Query: 318 LVDEGKNYFDE-MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+V G+ F M Y P ++HY C++D+L RAG+++EA ++ MP EPN V+ +
Sbjct: 326 MVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQEAMEVMTRMPFEPNKVMWGA 385
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
FL CR HG L L + + L++LEP GA YVL +++ + G W ++ + + G
Sbjct: 386 FLAGCRAHGD-LELSEFAARKLVELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGG 444
Query: 437 LNKVPGCSWVKV 448
L K GCS +++
Sbjct: 445 LTKDLGCSSIEL 456
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 236/396 (59%), Gaps = 5/396 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKA-CGRC 114
+F+ L V + +N +I A+ C E++ LF +M + G PD T+ ++ A G
Sbjct: 392 IFDKLAVRN-VTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEE 450
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L + VHS GL D +GN L+ MYA C AK VF++M R+V +W+ MI
Sbjct: 451 ALEWVK-EVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMI 508
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G +A +F +M P++ T VS++SAC S + + +HS+AV GL
Sbjct: 509 SGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLV 568
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ +G ALV MY+KCG V+ A +VF+ M E+++ SWT+MI GLA +GRG A+ LF KM
Sbjct: 569 SDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKM 628
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G KP+ SF A+LSACSH GLVDEG+ F + + Y I+PTMEHY CMVD+LGRAG
Sbjct: 629 KLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQ 688
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+EEA H I NMP EP + LGAC +G L + + K LKL+P+ + YVL ++
Sbjct: 689 LEEAKHFILNMPIEPGDAPWGALLGACVTYGN-LEMAEFAAKERLKLKPKSASTYVLLSN 747
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +GNW+ + + ++G+ K PG SW++V++
Sbjct: 748 IYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDN 783
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 144/243 (59%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I YA+ + +++K++ +M + G +P+ TY ++KAC + + G +H+ I + G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
SD + L+ MY C ID A+ +F++M R+V+SW+ MI G +A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M+ PNS T VS+++A S + + +HS+AV GL LD+ +G ALV MY+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++ A VF+ M E+++ SWT+MI GLA +GRG A SLF +M + G P+ ++ +IL+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 312 ACS 314
A +
Sbjct: 241 ASA 243
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 178/388 (45%), Gaps = 51/388 (13%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S S+ R +F+ + V +F++ +I A+ E+ LF +M + G P+ TY
Sbjct: 179 SGSIDDARVVFDGM-VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLS 237
Query: 107 VVKACGRCLLIGIGG-----SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
++ A + G VH K G SD +GN L+ MYA C ID A+ VF+
Sbjct: 238 ILNASA---ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDG 294
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
M RDV+SW++MI G +A +F +M+ P+S T +SL++ S
Sbjct: 295 MCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWV 354
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +H +AV GL D+ +G+A V MY +CG ++ A +F+ + +N+ +W MI G+A
Sbjct: 355 KEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQ 414
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSA----------------CSHLGLVD----- 320
G A+SLF +M + G PD+ +F ILSA GLVD
Sbjct: 415 KCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGN 474
Query: 321 -------------EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
K FD+M ++ + + M+ L + G EA+ + M
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDM-----VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLR 529
Query: 368 E---PNAVILRSFLGACRNHGQVLYLDD 392
E P+A S L AC + G + ++ +
Sbjct: 530 EGIVPDATTYVSILSACASTGALEWVKE 557
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 164/328 (50%), Gaps = 16/328 (4%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ + V + ++ +I A E+ F +M + G P+++TY ++ A
Sbjct: 87 IFDKM-VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAG 145
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ VHS GL D +GN L+ MYA ID A+ VF+ M RD+ SW+ MI
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIG 205
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLV--SACTSLINVRAGESIHSYAVVNGL 233
G +A +F +M+ PN T +S++ SA TS + + +H +A G
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGF 265
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D+ +G AL+ MY+KCG ++ A VF+ M ++++ SW MI GLA NG G+ A ++F K
Sbjct: 266 ISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLK 325
Query: 294 MIQTGLKPDSISFSAILSACSHLG---LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
M Q G PDS ++ ++L+ G V E + E+ V +++ V M
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVG----SAFVHMYI 381
Query: 351 RAGLIEEAYHI-----IRNMPTEPNAVI 373
R G I++A I +RN+ T NA+I
Sbjct: 382 RCGSIDDAQLIFDKLAVRNVTT-WNAMI 408
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 267/511 (52%), Gaps = 73/511 (14%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV-----TPP 65
Q + ++HHL Q H L L+T ++ I + + ++S + S ++L V P
Sbjct: 42 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 101
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------------- 111
+F +N +I+ + + ++I L+ EM+ RP+ +TYP V+KAC
Sbjct: 102 VFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHA 161
Query: 112 -----------------------------GRCLLIGIGGSVHSLIFKVGLDSDKYIG--- 139
R +L GG V ++ + +D G
Sbjct: 162 HLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE 221
Query: 140 ------------------NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
N ++ ++ C ++VA+ F+EM RD +SWS+MI G++
Sbjct: 222 AARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEG 281
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL++FH+M+ P L S++SAC +L + G IH+YA N ++LD LGT
Sbjct: 282 CFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT 341
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MY+KCG ++ A++VF M K + SW MI GLA +GR AI LF+KM + P
Sbjct: 342 SLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINP 398
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F +L+AC+H GLV +G F+ M + Y ++P +EHYGC+VD+LGRAGL+ EA +
Sbjct: 399 NEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 458
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ ++PTEP + + LGACR HG V L + +GK+LL+LEP+ Y L +++ + +G
Sbjct: 459 VSSIPTEPTPAVWGALLGACRKHGNV-ELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 517
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
W+ E+ + ++G+ PG S + + G
Sbjct: 518 WEEVGEVRKLMKERGIKTTPGTSIIDLGRGE 548
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 256/483 (53%), Gaps = 42/483 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPVT 63
L+ KT+ L ++H L L N IS I S + F R LF+ +P
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYA---EFGRPADAGRLFDEIP-H 81
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ +L+ + K ++I +F + +G RPD F + A G IG V
Sbjct: 82 PDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVV 141
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC--- 180
H LIF+ GLDS+ + N L+ MY C + + A+ VF+ M V+D V+W SM+ G++ C
Sbjct: 142 HGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 181 ----------------------------DSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
P AL++F +M L PN +T+V ++SAC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
+ + G +IH Y + ++ + AL++MY+K G + AF VF ++ K+ +WT
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWT 321
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MIS G G A+ LF M+++G+ P+S++F ++LSACSH GL+ EG+ FD+M V
Sbjct: 322 TMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREV 381
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y+I P +EHYGCMVD+LGR GL+EEA +I +M EP+ VI RS L AC HG L +
Sbjct: 382 YHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGND-RLAE 440
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
GK ++K EP YVL ++ +LS W A ++ + + + K PGCSW++V DG
Sbjct: 441 IAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEV-DGV 499
Query: 453 AEE 455
E
Sbjct: 500 VHE 502
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 241/401 (60%), Gaps = 3/401 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + S+F + P F +NT+IR Y ++ L+ EML+ G+ DNFTYP +
Sbjct: 34 SMDYACSIFRQID-QPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC I G +H IFK GL+ D ++ N+L+ MY C +I+++ +VFE M RDV
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVA 152
Query: 169 SWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
SWS++IA + S+ L VF M + + P LVS++SACT L + G H
Sbjct: 153 SWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVT 212
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ N E++V + T+L++MY KCG +EK +F M +KN S+++MI+GLA +GRG A
Sbjct: 213 LLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEA 272
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ +F+ M++ GLKPD + + +LSAC+H GLVDEG F+ M + I+PT++HYGC+V
Sbjct: 273 LQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVH 332
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
++GRAG++ +A IR+MP +PN V+ R L AC+ H L + + K L +L
Sbjct: 333 LMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHN-LEIGEIAAKSLGELNSSNPG 391
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+YV+ +++ + + W+ A++ + +KG + PG S V+V
Sbjct: 392 DYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQV 432
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 248/402 (61%), Gaps = 8/402 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACG 112
+ LF+ +P + ++N +I Y +T E+++LF EM+ T +RPD T VV AC
Sbjct: 175 QKLFDEIP-GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACA 233
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ I +G VHS I G S+ I N L+ +Y+ E++ A +F+ + +DV+SW++
Sbjct: 234 QSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNT 293
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVV 230
+I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 294 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKL 353
Query: 231 NGLELDVA-LGTALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIMISGLADNGRGNYAI 288
G+ +V+ L T+L++MY+KCG ++ A +VF+ M ++L +W MISG A +GR N A
Sbjct: 354 KGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAF 413
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F++M G++PD I+F +LSACSH G++D G+N F M R Y I P +EHYGCM+D+
Sbjct: 414 DIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDL 473
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LG +GL +EA +I MP EP+ VI S L AC+ HG L L ++ K L+K+EP +
Sbjct: 474 LGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN-LELGESFAKKLIKIEPGNSGS 532
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGL-NKVPGCSWVKVN 449
YVL +++ + +G W+ A++ +N KG+ KVPGCS ++++
Sbjct: 533 YVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEID 574
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 217/426 (50%), Gaps = 48/426 (11%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPVTPPLFAYNTLIRAY 76
+H +KT L HNT +L +S HF S+F+ + P L +NT+ R +
Sbjct: 7 IHAQMIKTGL-HNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQ-EPNLLIWNTMFRGH 64
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
A +S + ++KL+ M+ GL PD++T+PF++K+C + + G +H + K+G D D
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 137 YIGNTLLRMYA-------ACKEIDV------------------------AKAVFEEMPVR 165
Y+ +L+ MYA A K D+ A+ +F+E+P +
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGESI 224
DVVSW++MI+G+V + +AL++F M + N P+ T+V++VSAC ++ G +
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
HS+ +G ++ + AL+++YSK G VE A ++F+ + K++ SW +I G
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEMAR--VYNIKPTM 339
A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y ++ + V N+
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
++DM + G I+ A + + + + + + HG+ D ++ +
Sbjct: 365 T---SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421
Query: 400 K-LEPE 404
+EP+
Sbjct: 422 NGIEPD 427
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 249/428 (58%), Gaps = 33/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ V L ++N++I Y + + E+ L+ +M + + PD T VV A
Sbjct: 209 ARKLFDESCVRD-LVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASA 267
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------ 160
+ + +G +H I ++GL+ + N L+ MY CK I+ AK +FE
Sbjct: 268 QLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTT 327
Query: 161 -------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
EMP +DVV W+++I GFV +AL +FH M+ ++ +P+
Sbjct: 328 MVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPD 387
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T+V+ +SAC+ L + G +H Y + L ++VALGTALV+MY+KCG+++KA +VF
Sbjct: 388 KITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFE 447
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M +N +WT +I GLA +G+ + AIS F++MI GL PD I+F +LSAC H GLVD+
Sbjct: 448 EMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQ 507
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++YF +M Y I P ++HY C+VD+LGRAG +EEA +IR+MP EP+AV+ +
Sbjct: 508 GRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGS 567
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R HG V ++ + LL+L+P G YVL A++ + W+ A ++ + ++G+ K P
Sbjct: 568 RIHGNV-HMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTP 626
Query: 442 GCSWVKVN 449
GCS +++N
Sbjct: 627 GCSSIEMN 634
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 44/417 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ ++ + ++H + T L + +SR F S +L + + NN
Sbjct: 59 SLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN-AANL 117
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGGSV 123
F++N IR Y ++ I ++ L+ ML+ G PDN+TYP + K C L +
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ ++G DSD ++ N ++ + +C E+ A+ +F+E VRD+VSW+S+I G+V C
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A ++++M N P+ VT++ +VSA L N+ G +H GL L V L AL
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 244 VEMYSKC-------------------------------GHVEKAFKVFNLMREKNLQSWT 272
++MY KC G +E A ++FN M EK++ W
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWN 357
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDEM 329
+I G R A++LF +M + + PD I+ LSACS LG +D G +Y D+
Sbjct: 358 ALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK- 416
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+N+ + +VDM + G I++A + MP N++ + + HGQ
Sbjct: 417 ---HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQ 469
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 249/428 (58%), Gaps = 33/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ V L ++N++I Y + + E+ L+ +M + + PD T VV A
Sbjct: 209 ARKLFDESCVRD-LVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASA 267
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------ 160
+ + +G +H I ++GL+ + N L+ MY CK I+ AK +FE
Sbjct: 268 QLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTT 327
Query: 161 -------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
EMP +DVV W+++I GFV +AL +FH M+ ++ +P+
Sbjct: 328 MVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPD 387
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T+V+ +SAC+ L + G +H Y + L ++VALGTALV+MY+KCG+++KA +VF
Sbjct: 388 KITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFE 447
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M +N +WT +I GLA +G+ + AIS F++MI GL PD I+F +LSAC H GLVD+
Sbjct: 448 EMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQ 507
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++YF +M Y I P ++HY C+VD+LGRAG +EEA +IR+MP EP+AV+ +
Sbjct: 508 GRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGS 567
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R HG V ++ + LL+L+P G YVL A++ + W+ A ++ + ++G+ K P
Sbjct: 568 RIHGNV-HMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTP 626
Query: 442 GCSWVKVN 449
GCS +++N
Sbjct: 627 GCSSIEMN 634
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 201/417 (48%), Gaps = 44/417 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ ++ + ++H + T L + +SR F S +L + + NN
Sbjct: 59 SLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN-AANL 117
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGGSV 123
+F++N IR Y ++ I ++ L+ ML+ G PDN+TYP + K C L +
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ ++G DSD ++ N ++ + +C E+ A+ +F+E VRD+VSW+S+I G+V C
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A ++++M N P+ VT++ +VSA L N+ G +H GL L V L AL
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 244 VEMYSKC-------------------------------GHVEKAFKVFNLMREKNLQSWT 272
++MY KC G +E A ++FN M EK++ W
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWN 357
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDEM 329
+I G R A++LF +M + + PD I+ LSACS LG +D G +Y D+
Sbjct: 358 ALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK- 416
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+N+ + +VDM + G I++A + MP N++ + + HGQ
Sbjct: 417 ---HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQ 469
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 262/455 (57%), Gaps = 13/455 (2%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS--RFILTSLSI-SLHFTRSLFNN 59
S I +LI ++ L Q+ +KT ++ T + F ++ +I S+ +F+
Sbjct: 35 SSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDK 94
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + +NT+ R YA+ + +I L ++L +GL PD++T+ ++KAC R +
Sbjct: 95 IP-QPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEE 153
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H L K+G+ + Y+ TL+ MY AC ++D A+ VF+++ VV+++++I
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCAR 213
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P++AL +F ++ + P VT++ +S+C L + G IH Y NG + V +
Sbjct: 214 NSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKV 273
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
TAL++MY+KCG ++ A VF M ++ Q+W+ MI A +G G+ AIS+ +M + +
Sbjct: 274 NTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKV 333
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+PD I+F IL ACSH GLV+EG YF M Y I P+++HYGCM+D+LGRAG +EEA
Sbjct: 334 QPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEAC 393
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK----LEPELGANYVLAASV 415
I +P +P ++ R+ L +C +HG V + KL+++ L+ G +YV+ +++
Sbjct: 394 KFIDELPIKPTPILWRTLLSSCSSHGNV-----EMAKLVIQRIFELDDSHGGDYVILSNL 448
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ +G WD L + KG KVPGCS ++VN+
Sbjct: 449 CARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNN 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK- 249
H A P S +++SL+ CTSL R + I +Y + L T L+ +
Sbjct: 24 HEPNTAALEPPSSSILSLIPKCTSL---RELKQIQAYTIKTHQNNPTVL-TKLINFCTSN 79
Query: 250 --CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
++ A ++F+ + + ++ + M G A AI L ++++ +GL PD +FS
Sbjct: 80 PTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFS 139
Query: 308 AILSACSHLGLVDEGKN 324
++L AC+ L ++EGK
Sbjct: 140 SLLKACARLKALEEGKQ 156
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 266/445 (59%), Gaps = 5/445 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
L+Q ++ LHQ+H + + + ++++ + L + S+ +TR +F +P P F
Sbjct: 18 LLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVP-NPDSF 76
Query: 68 AYNTLIRAYAKT-SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+ +LI++ +K+ + SI S+ + M+ + + P N+T+ V+K+C + G VH
Sbjct: 77 LFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGH 136
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ G D Y+ L+ +Y C ++ A+ VF+++ R +V+W+SMI+G+ +A
Sbjct: 137 VLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEA 196
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F RMK P+S T VS++SAC L G +H Y V NGL+L+V LGT+L+ M
Sbjct: 197 IGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINM 256
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y +CG+V KA +VF+ M+E+N+ +WT MISG NG G+ A+ LF +M + GL P+SI+F
Sbjct: 257 YIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITF 316
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR-NM 365
A+LSAC+H GLV+EG+ F + Y++ P +EH C+VDMLGRAGL++EAY+ I+ +
Sbjct: 317 VAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEI 376
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P P IL + LGAC+ H L + + LL EPE A+YV+ +++ +L+G D
Sbjct: 377 PENPAPAILTAMLGACKMHKN-FDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQV 435
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
+ + +K L K G S V+V+
Sbjct: 436 EIVRNNMIRKCLKKQVGYSTVEVDQ 460
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 261/443 (58%), Gaps = 13/443 (2%)
Query: 21 QLHTLFLKTSLDHNTCI---ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +KT L N + + RF S I +F+ P L ++ TLI+AY+
Sbjct: 159 QIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEA--VEKVFDQGP-HWDLISWTTLIQAYS 215
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD--SD 135
K E+I F M T D T V+ AC + +G + + + D SD
Sbjct: 216 KMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSD 272
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++GN LL MY C + +A+ +F MPV+++VSW+SMI+G +AL +F RM+
Sbjct: 273 VFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQT 332
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
P+SVTLV ++++C +L ++ G+ +HSY N ++ D + ALV+MY+KCG +++
Sbjct: 333 MGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQ 392
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF VF M+ K++ S+T MI G A +G+ + A+++F++M + G++PD ++ +LSACSH
Sbjct: 393 AFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSH 452
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
GL++EG+ +F +M+R+Y+++P EHYGCMVD+LGRAGLI EA MP P+A +
Sbjct: 453 AGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWG 512
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
S LGAC+ H +V L + + + L+++EPE Y+L +++ S + W A + A+ Q
Sbjct: 513 SLLGACKIHAKV-ELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQN 571
Query: 436 GLNKVPGCSWVKVNDGSAEEMSK 458
+ K PGCS ++V DG E K
Sbjct: 572 NIKKTPGCSSIEV-DGMVHEFRK 593
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 205/376 (54%), Gaps = 26/376 (6%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTC---IIS--RFILTSLSISLHFTRSLFN----- 58
L+ K+V + Q+H +K + +T IIS I + L +H S+ N
Sbjct: 32 LLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQNLWYAS 91
Query: 59 ---NLPVTPPLFAYNTLIRAYAKTSCSIESI-KLFDEMLKTGLRPDNFTYPFVVKACGRC 114
N P++ +N +I++ + ++ + I L+ +ML GL PD +T P+++KAC +
Sbjct: 92 SLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQS 151
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+H+ K GL S+ ++ NTL+R YA I+ + VF++ P D++SW+++I
Sbjct: 152 HAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLI 211
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ PS+A+ F RM N + + +TLV ++SAC+ L + G+ I +Y + +
Sbjct: 212 QAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFD 268
Query: 235 L--DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ DV LG AL++MY KCG A ++F+LM KNL SW MISGLA G A+ +F
Sbjct: 269 VHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFR 328
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDML 349
+M GLKPDS++ +L++C++LG ++ GK +Y D+ ++K +VDM
Sbjct: 329 RMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDK----NHMKADGYVANALVDMY 384
Query: 350 GRAGLIEEAYHIIRNM 365
+ G I++A+ + + M
Sbjct: 385 AKCGSIDQAFMVFQAM 400
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
++ +M L SP++ TL L+ AC+ IH++++ GL ++ + L+
Sbjct: 123 FSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRF 182
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+ G +E KVF+ +L SWT +I + G + AI+ F +M T D ++
Sbjct: 183 YAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTL 239
Query: 307 SAILSACSHLGLVDEGKN---YFD--------------------------EMAR-VYNIK 336
+LSACS LG GK Y D +AR ++++
Sbjct: 240 VVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLM 299
Query: 337 PT--MEHYGCMVDMLGRAGLIEEAYHIIRNMPT---EPNAVILRSFLGACRNHGQVLYLD 391
P + + M+ L GL +EA H+ R M T +P++V L L +C N G D
Sbjct: 300 PVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLG-----D 354
Query: 392 DNLGK 396
LGK
Sbjct: 355 LELGK 359
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 235/403 (58%), Gaps = 2/403 (0%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S + R +F+ + + + ++NTL+ A+ E++ +M + G RPD+FT
Sbjct: 117 STAFESVRKVFDEM-IERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLST 175
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+ C + G VH F+ G DSD ++G++L+ MYA C D + VF+ +PVRD
Sbjct: 176 VLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 235
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+ W+S++AG S +AL +F RM A P VT SL+ C +L ++R G+ +H+
Sbjct: 236 HILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHA 295
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
Y + G E +V + ++L++MY KCG + A +F+ M ++ SWT MI G A +G
Sbjct: 296 YVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPARE 355
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF +M KP+ I+F A+L+ACSH GLVD+G YF M+ Y I PT+EH+ +
Sbjct: 356 ALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALA 415
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D LGRAG ++EAY+ I M +P A + + L ACR H + L + + K +++LEP
Sbjct: 416 DTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTM-LAEEVAKKIMELEPRSI 474
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++V+ +++ S SG W+ AA L ++ +KG+ K P CSW++V
Sbjct: 475 GSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVK 517
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 31/325 (9%)
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNF--TYPFVVKACGRCLLIGIGGSVHSLIFKV 130
IRA A +++ LF M + + + P +K+C L +G S+H+L +
Sbjct: 20 IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79
Query: 131 GLDSDKYIGNTLLRMYA--ACKEIDVA-----------------KAVFEEMPVRDVVSWS 171
G +D++ N LL +Y C +D + VF+EM RDVVSW+
Sbjct: 80 GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+++ G +AL +M P+S TL +++ +V+ G +H +A N
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRN 199
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G + DV +G++L++MY+ C + + KVF+ + ++ W +++G A NG A+ +F
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVD 347
+M+Q G++P ++FS+++ C +L + GK Y I E ++D
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQL-----HAYVICGGFEDNVFISSSLID 314
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAV 372
M + G I A+ I M + P+ V
Sbjct: 315 MYCKCGEISIAHCIFDKM-SSPDVV 338
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA---CTSLINVRAGESIHS 226
W+ I A DA+ +F RM+ A+ +P S SL +A C +L G S+H+
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMR-ASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74
Query: 227 YAVVNGLELDVALGTALVEMYSK--CGHV-----------------EKAFKVFNLMREKN 267
A+ +G D AL+ +Y K C ++ E KVF+ M E++
Sbjct: 75 LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG----- 322
+ SW ++ G A+ GR + A+ KM + G +PDS + S +L + V G
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194
Query: 323 ---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+N FD V + ++DM + + + N+P + ++ S L
Sbjct: 195 FAFRNGFDSDVFVGS---------SLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLA 244
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
C +G V ++ LG L+ + V +S+ + GN
Sbjct: 245 GCAQNGSV---EEALGIFRRMLQAGVRPVPVTFSSLIPVCGN 283
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 258/462 (55%), Gaps = 11/462 (2%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNL--P 61
+H L++ S + Q LK+ L N +++R +S + + L L P
Sbjct: 28 QHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAAAAPALLEPLVAALLRP 87
Query: 62 VTP-PLFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL-L 116
P F NTLIRA+A + S + + F ML++ + P+ FT+PF++KAC
Sbjct: 88 SVPIDAFLVNTLIRAHAASPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGF 147
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA--ACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G+G H+ K G +D+Y+ NTL+ MY+ + + A+ VF+ M VV+WS+MI
Sbjct: 148 PGVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMI 207
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+V SDA+ +F M+ + P+ VT++ +++A L + + + G+
Sbjct: 208 GGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIG 267
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
V L AL++ +KCG V+ A VF M E+ + SWT +I LA GRG A+++F M
Sbjct: 268 KSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAM 327
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G++PD + F +L+ACSH G+VDEG YFD M Y I P +EHYGCMVDM GRAG+
Sbjct: 328 KTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGM 387
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+E A I MP +PN +I R+ + ACR HG+ L L +++ + LL P ANYV+ ++
Sbjct: 388 VERAMEFIHTMPMKPNPIIWRTLVAACRAHGR-LELGESITRNLLNEYPAHEANYVMLSN 446
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
V +L+ W +E+ ++++G+ KVPGCS V++ DG E
Sbjct: 447 VYALTQRWKEKSEIRREMSKRGIKKVPGCSLVEL-DGEVHEF 487
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 261/479 (54%), Gaps = 33/479 (6%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLP 61
+ I +L+Q S+ ++ + +H ++ + ++ + + S ++ + +F
Sbjct: 49 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-YT 107
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ Y LI + + +E+I+L+ ML + PDN+ ++KACG L + G
Sbjct: 108 HNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGR 167
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP------------------ 163
VHS K+G S++ + ++ +Y C E+ A+ VFEEMP
Sbjct: 168 EVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGL 227
Query: 164 ------------VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+D V W++MI GFV + + AL+ F M+ N PN T+V ++SA
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSA 287
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L + G +HSY +EL++ +G AL+ MYS+CG +++A VF+ M+++++ ++
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 347
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MISGL+ NG+ AI LF M+ L+P +++F +L+ACSH GLVD G F MAR
Sbjct: 348 NTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMAR 407
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y ++P +EHYGCMVD+LGR G +EEAY +IR M P+ ++L + L AC+ H + L L
Sbjct: 408 DYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMH-KNLELG 466
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + K L YVL + V + SG W AA++ + + G+ K PGCS ++VN+
Sbjct: 467 EQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 525
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 243/409 (59%), Gaps = 5/409 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACG 112
R +F+ + L ++N+L+ YAK + E++++F + + +G PD + V+ ACG
Sbjct: 172 RKVFDEI-TEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACG 230
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G V + + G+ + YIG+ L+ MY+ C E+ ++ +F+ MP RD ++W++
Sbjct: 231 ELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNA 290
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
I+ + +A+ +FH MK PN VTL +++SAC S+ + G+ + YA G
Sbjct: 291 AISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG 350
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ D+ + TAL++MY+KCG +E A +VFN M KN SW MIS LA +G+ A+SLF
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410
Query: 293 KMIQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
+M G +P+ I+F ++LSAC H GLVDEG FD M+ ++ + P +EHY CMVD+L
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLS 470
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG + EA+ +I MP +P+ V L + AC+ V + + + ++LL+L+P NY+
Sbjct: 471 RAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNV-DIGERVIQMLLELDPSNSGNYI 529
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+++ + WD AA + + + G+ K PGCSW++V + E +S +
Sbjct: 530 ISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 217/384 (56%), Gaps = 13/384 (3%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRS--LFNNLPVTP 64
+L++ + L Q+HT F S+ ++S+ SISL FT S +F+++ P
Sbjct: 26 SLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQ------SISLKDFTYSTLIFSHITPHP 79
Query: 65 PLFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+A+N ++RA T ++ L+ +M + P+NFT+PFV AC I +
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GLD+D + N+++ MY C E VA+ VF+E+ +D+VSW+S+++G+
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199
Query: 184 SDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A++VF R++ + P+ ++LVS++ AC L ++ G + + V G++++ +G+A
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ MYSKCG + + ++F+ M ++ +W IS A NG + AISLF M + G+ P+
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ +A+LSAC+ +G +D GK DE A ++ + ++DM + G +E A +
Sbjct: 320 KVTLTAVLSACASIGALDLGKQ-MDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVF 378
Query: 363 RNMPTEPNAVILRSFLGACRNHGQ 386
+MP + +A + + A +HG+
Sbjct: 379 NDMPRKNDAS-WNAMISALASHGK 401
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 238/390 (61%), Gaps = 1/390 (0%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+L T + ++N L+ YA+ S +++ L+ +M +GL PD FT ++ AC R +
Sbjct: 268 DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLH 327
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H + GL D +IG +LL +Y C + A+ +F+ M R +VSW+ MIAG+
Sbjct: 328 YGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYS 387
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
P +A+ +F +M P + ++ + AC+ L +R G+ +H +A+ L D+
Sbjct: 388 QNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 447
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ +++++MY+K G + + ++F+ +REK++ SW ++I+G +GRG A+ LF KM++ G
Sbjct: 448 VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG 507
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
LKPD +F+ IL ACSH GLV++G YF++M ++NI+P +EHY C+VDMLGRAG I++A
Sbjct: 508 LKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDA 567
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+I MP +P++ I S L +CR HG L L + + LL+LEPE NYVL +++ +
Sbjct: 568 LRLIEEMPGDPDSRIWSSLLSSCRIHGN-LGLGEKVANKLLELEPEKPENYVLISNLFAG 626
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
SG WD + + GL K GCSW++V
Sbjct: 627 SGKWDDVRRVRGRMKDIGLQKDAGCSWIEV 656
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 178/316 (56%), Gaps = 7/316 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
I++ + +H + T F + NT II+ + S+ S +R +F+ L LF +
Sbjct: 121 IEVGRRLHEMVSASTQFCNDFV-LNTRIITMY---SMCGSPSDSRMVFDKLR-RKNLFQW 175
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N ++ AY + +++ +F E++ T +PDNFT P V+KAC L +G+G +H +
Sbjct: 176 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 235
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVA-KAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+ L SD ++GN L+ MY C ++ A K VF+ M + V SW++++ G+ P AL
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 295
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++ +M + P+ T+ SL+ AC+ + ++ GE IH +A+ NGL +D +G +L+ +Y
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 355
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
CG A +F+ M ++L SW +MI+G + NG + AI+LF +M+ G++P I+
Sbjct: 356 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 415
Query: 308 AILSACSHLGLVDEGK 323
+ ACS L + GK
Sbjct: 416 CVCGACSQLSALRLGK 431
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSY-AVVNGLELDVALGTALVEMYSKCGHVEK 255
+ + S + L+ AC ++ G +H + D L T ++ MYS CG
Sbjct: 100 DSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSD 159
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACS 314
+ VF+ +R KNL W ++S N A+S+F+++I T KPD+ + ++ AC+
Sbjct: 160 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 219
Query: 315 HLGLVDEG-KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
GL+D G MA ++ + ++ M G+ GL+EEA
Sbjct: 220 --GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 262
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 285/492 (57%), Gaps = 49/492 (9%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTS--LDHNTC--IISRFILTSLSISLHFTRSLFN 58
S+ +L++ +T+ + Q+H+ + ++ LD IIS F ++S + + LF
Sbjct: 10 SQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSS-NADISHAYKLFL 68
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+LP F +NT+IR + + + + ++ L+ ML+TG P+N+T+ FV++AC +G
Sbjct: 69 SLP-HRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVG 127
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYA---------------ACKEI----------- 152
+ H+ + K+G +S ++ N L+ +YA C+++
Sbjct: 128 LAS--HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYV 185
Query: 153 -----DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
+ A+ +F++MP R+ VSWS+MI G+V +AL++F+ ++L PN +V
Sbjct: 186 KSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVG 245
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++AC+ L ++ G IH+Y NG ELD LGTALV+MY+KCG +E A VF M +K+
Sbjct: 246 ALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKD 305
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
++T +ISGLA++G+ AI LF +M + P+ ++F +LSACS +GLVDEG F+
Sbjct: 306 AFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFN 365
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M+ VY I+P ++HYGCMVD+LGRAGL+EEA ++R MP EP++ +L + L +CR HG V
Sbjct: 366 CMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDV 425
Query: 388 LYLDDNLGKLLLKLEPELGAN----YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
LGK ++ E G + +VL +++ + S WD ++ + K + KVPGC
Sbjct: 426 -----ELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGC 480
Query: 444 SWVKVNDGSAEE 455
S +++ DGS E
Sbjct: 481 SSIEI-DGSVSE 491
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 137/326 (42%), Gaps = 58/326 (17%)
Query: 108 VKACGRCL-------LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA--V 158
VKA RCL + +HS + D + ++ ++A D++ A +
Sbjct: 7 VKASQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKL 66
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F +P R W+++I FV + + AL ++ M PN+ T ++ ACT N
Sbjct: 67 FLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTD--NS 124
Query: 219 RAGESIHSYAVVNGLE-------------------------------LDVALGTALVEMY 247
G + H+ + G E DV TAL+ Y
Sbjct: 125 PVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGY 184
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K GHVE A ++F+ M E+N SW+ MI+G G A+ LF + TGL+P+
Sbjct: 185 VKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIV 244
Query: 308 AILSACSHLGLVDEGK---NYFD----EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
L+ACS+LG +D G+ Y D E+ RV +VDM + G IE A
Sbjct: 245 GALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGT--------ALVDMYAKCGCIEIACS 296
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQ 386
+ MP + +A S + NHGQ
Sbjct: 297 VFEKMP-DKDAFAFTSLISGLANHGQ 321
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 244/411 (59%), Gaps = 3/411 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L F + +F+ + + L ++NTLI Y++ + E ++LFD M ++ D T ++
Sbjct: 74 QLGFAQKMFDGM-LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKII 132
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC S+ I + L+ D Y+GNTL+ MY + A+ +F+ MP RDV+
Sbjct: 133 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVI 192
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+SMI G+ SDA+K+F M A P+ VT+ S++SAC L + G ++H Y
Sbjct: 193 SWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYI 252
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+G++ D+ +G +L++MY KCG VEKA +VF+ M++K+ SWT +ISGLA NG N A+
Sbjct: 253 RRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSAL 312
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF++M++ G++P +F IL AC+H GLV++G YF+ M V+ + P M+HYGC+VD+
Sbjct: 313 DLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDL 372
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L R+G I++AY I+ MP P+ V+ R L AC+ HG V+ L + K LL+L+P N
Sbjct: 373 LSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVV-LAEIATKRLLELDPCDSGN 431
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
YVL ++ + WD A ++ + + K G S ++V DG S+E
Sbjct: 432 YVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEV-DGMVSNYSQE 481
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 148/250 (59%), Gaps = 1/250 (0%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
I S+H K+G +S ++ N L+ MYA C ++ A+ +F+ M RD+VSW+++I G+
Sbjct: 42 ISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYS 101
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ + L++F M AN ++VT+V ++ AC+ L + +S+ Y N LE+DV
Sbjct: 102 QYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVY 161
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
LG L++MY + G++ A K+F+ M ++++ SWT MI+G + + + A+ LF +M+
Sbjct: 162 LGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK 221
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KPD ++ +++LSAC+HLG +D G + R + ++ + ++DM + G++E+A
Sbjct: 222 VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKA 280
Query: 359 YHIIRNMPTE 368
+ M +
Sbjct: 281 LEVFHRMKDK 290
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA-GESIHSYAVVNGLELDVALG 240
SP D + H + + +++ +LV A T+ IN SIH +A+ G E + +
Sbjct: 3 SPCDRRQKSHFLFIIVALSSTIAPAALVVALTTNINASTISSSIHVHALKLGFESYLFVS 62
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL+ MY+ CG + A K+F+ M +++L SW +I G + + + LF M +K
Sbjct: 63 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 122
Query: 301 PDSISFSAILSACSHLG---LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
D+++ I+ ACSHLG D Y E N++ + ++DM GR G +
Sbjct: 123 ADAVTMVKIILACSHLGDWEFADSMVKYIKE----NNLEIDVYLGNTLIDMYGRLGNLTA 178
Query: 358 AYHIIRNMP 366
A + NMP
Sbjct: 179 ARKLFDNMP 187
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 243/409 (59%), Gaps = 5/409 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACG 112
R +F+ + L ++N+L+ YAK + E++++F + + +G PD + V+ ACG
Sbjct: 172 RKVFDEI-TEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACG 230
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G V + + G+ + YIG+ L+ MY+ C E+ ++ +F+ MP RD ++W++
Sbjct: 231 ELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNA 290
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
I+ + +A+ +FH MK PN VTL +++SAC S+ + G+ + YA G
Sbjct: 291 AISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG 350
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ D+ + TAL++MY+KCG +E A +VFN M KN SW MIS LA +G+ A+SLF
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410
Query: 293 KMIQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
+M G +P+ I+F ++LSAC H GLVDEG FD M+ ++ + P +EHY CMVD+L
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLS 470
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG + EA+ +I MP +P+ V L + AC+ V + + + ++LL+L+P NY+
Sbjct: 471 RAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNV-DIGERVIQMLLELDPSNSGNYI 529
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+++ + WD AA + + + G+ K PGCSW++V + E +S +
Sbjct: 530 ISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 217/384 (56%), Gaps = 13/384 (3%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRS--LFNNLPVTP 64
+L++ + L Q+HT F S+ ++S+ SISL FT S +F+++ P
Sbjct: 26 SLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQ------SISLKDFTYSTLIFSHITPHP 79
Query: 65 PLFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+A+N ++RA T ++ L+ +M + P+NFT+PFV AC I +
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GLD+D + N+++ MY C E VA+ VF+E+ +D+VSW+S+++G+
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199
Query: 184 SDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A++VF R++ + P+ ++LVS++ AC L ++ G + + V G++++ +G+A
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ MYSKCG + + ++F+ M ++ +W IS A NG + AISLF M + G+ P+
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ +A+LSAC+ +G +D GK DE A ++ + ++DM + G +E A +
Sbjct: 320 KVTLTAVLSACASIGALDLGKQ-MDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVF 378
Query: 363 RNMPTEPNAVILRSFLGACRNHGQ 386
+MP + +A + + A +HG+
Sbjct: 379 NDMPRKNDAS-WNAMISALASHGK 401
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 261/479 (54%), Gaps = 33/479 (6%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLP 61
+ I +L+Q SK ++ + +H ++ + ++ + + S ++ + +F
Sbjct: 49 QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-YT 107
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P ++ Y LI + + ++I+L+ ML + PDN+ ++KACG L + G
Sbjct: 108 HNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGR 167
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP------------------ 163
VHS K+GL S++ + ++ +Y C E+ A+ VFEEMP
Sbjct: 168 EVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGL 227
Query: 164 ------------VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+D V W++MI GFV + + AL+ F M+ N PN T+V ++SA
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSA 287
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L + G +HSY +EL++ +G AL+ MYS+CG +++A VF+ M+++++ ++
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 347
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MISGL+ NG+ AI LF MI L+P +++F +L+ACSH GLVD G F M R
Sbjct: 348 NTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTR 407
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y ++P +EHYGCMVD+LGR G +EEAY +IR M P+ ++L + L AC+ H + L L
Sbjct: 408 DYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMH-KNLELG 466
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + K+L YVL + V + SG W AA++ + + G+ K PGCS ++VN+
Sbjct: 467 EQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 525
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 275/518 (53%), Gaps = 70/518 (13%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLS----ISLHFTRSLFNNLP 61
I + + +K++ + Q H LKT L H+T S+ + + + ++ + S+ N +
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIE 71
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+P F +N++IRAYA +S ++ +F EML + PD +++ FV+KAC G
Sbjct: 72 -SPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 130
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS--------- 172
+H L K L +D ++ NTL+ +Y ++A+ V + MPVRD VSW+S
Sbjct: 131 QIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKG 190
Query: 173 ----------------------MIAGFVACDSPSDALKVFHRMKLAN------------- 197
MI+G+ A +A +VF M + +
Sbjct: 191 LVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAH 250
Query: 198 -------------------ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
E P+ TLV+++SAC SL ++ GE +H Y +G+E++
Sbjct: 251 VGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 310
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ TALV+MYSKCG ++KA +VF ++++ +W +I+GL+ +G G A+ +F++M+ G
Sbjct: 311 VATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEG 370
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
KP+ I+F +LSAC+H+GL+D+ + F+ M VY I+PT+EHYGCMVD+LGR G EEA
Sbjct: 371 FKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEA 430
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
++ +P + +++L S LGAC+ G+ L + + LL+ P + YV +++ +
Sbjct: 431 EELVNEVPADEASILLESLLGACKRFGK-LEQAERIANRLLESNPRESSGYVQMSNLYAS 489
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
G WD A E+ + + + K PGCS ++V DG E
Sbjct: 490 HGRWDEAMEVRGKMRAERVKKNPGCSMIEV-DGVVHEF 526
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 275/532 (51%), Gaps = 79/532 (14%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNN 59
R L + +++ + Q+H L + ++ + I S + R +F+
Sbjct: 8 QRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDR 67
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-------LRPDNFTYPFVVKACG 112
+P P F YNTLIR A + +++ ++ M + LRPD T+PFV++AC
Sbjct: 68 IP-HPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC----------------------- 149
G VH+ + K G +SD ++ N L+ M+A
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 150 --------KEIDVAKAVFEEMPVR-------------------------------DVVSW 170
+I A+ +F+E PV+ DVVSW
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--A 228
++MI+G+V C S A+++F +M+ E P++VT++SL+SAC ++ AG +H +
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSG 306
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + ALG AL++MY+KCG + A +VF LM++KN+ +W +I GLA +G +I
Sbjct: 307 RFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
++F KM+Q +KPD I+F A+L+ACSH G+VD+G YF M + Y I+P ++HYGCMVDM
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L R GL++EA+ I M EPN VI R+ LGACR HG++ L ++ + LLK + +
Sbjct: 427 LSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEI-ELAEHANRELLKARSDASGD 485
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKET 460
+VL +++ + G W + + ++ G+NK G + V D S++++ + +
Sbjct: 486 FVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRA---VIDSSSKDLMRSS 534
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 275/532 (51%), Gaps = 79/532 (14%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS---LSISLHFTRSLFNN 59
R L + +++ + Q+H L + ++ + I S + R +F+
Sbjct: 8 QRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDR 67
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-------LRPDNFTYPFVVKACG 112
+P P F YNTLIR A + +++ ++ M + LRPD T+PFV++AC
Sbjct: 68 IP-HPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC----------------------- 149
G VH+ + K G +SD ++ N L+ M+A
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 150 --------KEIDVAKAVFEEMPVR-------------------------------DVVSW 170
+I A+ +F+E PV+ DVVSW
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--A 228
++MI+G+V C S A+++F +M+ E P++VT++SL+SAC ++ AG +H +
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSG 306
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + ALG AL++MY+KCG + A +VF LM++KN+ +W +I GLA +G +I
Sbjct: 307 RFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
++F KM+Q +KPD I+F A+L+ACSH G+VD+G YF M + Y I+P ++HYGCMVDM
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L R GL++EA+ I M EPN VI R+ LGACR HG++ L ++ + LLK + +
Sbjct: 427 LSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEI-ELAEHANRELLKARSDASGD 485
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKET 460
+VL +++ + G W + + ++ G+NK G + V D S++++ + +
Sbjct: 486 FVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRA---VIDSSSKDLMRSS 534
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 231/382 (60%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+N +I AY + ++ F +LK G++P++ T+ ++ C + +G VH LI
Sbjct: 481 AWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLI 540
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL+SD ++ N L+ M+ C ++ AK +F +MP RD+VSW+++IAGFV A
Sbjct: 541 MKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAF 600
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F M+ + P+ +T L++AC S + G +H+ + DV +GT L+ MY
Sbjct: 601 DYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG +E A +VF+ + +KN+ SWT MI+G A +GRG A+ LF +M Q G+KPD I+F
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
LSAC+H GL++EG ++F M + +NI+P MEHYGCMVD+ GRAGL+ EA I M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP++ + + LGAC+ H V L + + L+L+P +V+ +++ + +G W A+
Sbjct: 780 EPDSRVWGALLGACQVHLNV-ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAK 838
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + +G+ K PG SW++V+
Sbjct: 839 MRKVMLDRGVVKKPGQSWIEVD 860
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 184/334 (55%), Gaps = 5/334 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+++ ++++N L+ Y + E+ KL ++M++ ++PD T+ ++ AC
Sbjct: 165 KQIFDDMR-EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +++LI K G D+D ++G L+ M+ C +I A VF+ +P RD+V+W+SM
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G A +F RM+ P+ V VSL+ AC + G+ +H+ G
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ ++ +GTA++ MY+KCG +E A +VF+L++ +N+ SWT MI+G A +GR + A F K
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRA 352
MI++G++P+ ++F +IL ACS + G+ D + Y + ++ M +
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKC 461
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G +++A+ + + ++ N V + + A H Q
Sbjct: 462 GSLKDAHRVFEKI-SKQNVVAWNAMITAYVQHEQ 494
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 197/381 (51%), Gaps = 16/381 (4%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-------TRSLFNNLPVTPP 65
++ V +L+ L LK D + F+ T+L I++H +F+NLP T
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDL-----FVGTAL-INMHIKCGDIGDATKVFDNLP-TRD 276
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L + ++I A+ ++ LF M + G++PD + +++AC + G VH+
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ +VG D++ Y+G +L MY C ++ A VF+ + R+VVSW++MIAGF +
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A F++M + PN VT +S++ AC+S ++ G+ I + + G D + TAL+
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++ A +VF + ++N+ +W MI+ + + + A++ F +++ G+KP+S +
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F++IL+ C ++ GK + + ++ + +V M G + A ++ +M
Sbjct: 517 FTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 366 PTEPNAVILRSFLGACRNHGQ 386
P + V + + HG+
Sbjct: 576 PKR-DLVSWNTIIAGFVQHGK 595
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 175/345 (50%), Gaps = 33/345 (9%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N ++ +K E++++ + + + ++ TY +++ C + +G G +++ I K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G+ D ++ NTL+ MYA C AK +F++M +DV SW+ ++ G+V +A K+
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
+M + P+ T VS+++AC NV G +++ + G + D+ +GTAL+ M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG + A KVF+ + ++L +WT MI+GLA +GR A +LF +M + G++PD ++F ++
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 310 LSACSHLGLVDEGKNYFDEMARV---------------YNIKPTMEH------------- 341
L AC+H +++GK M V Y +ME
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 342 --YGCMVDMLGRAGLIEEAYHIIRNM---PTEPNAVILRSFLGAC 381
+ M+ + G I+EA+ M EPN V S LGAC
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 166/326 (50%), Gaps = 16/326 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I +A+ E+ F++M+++G+ P+ T+ ++ AC + G + I
Sbjct: 380 SWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ G SD + LL MYA C + A VFE++ ++VV+W++MI +V + +AL
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F + PNS T S+++ C S ++ G+ +H + GLE D+ + ALV M+
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF 559
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
CG + A +FN M +++L SW +I+G +G+ A F M ++G+KPD I+F+
Sbjct: 560 VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-------MVDMLGRAGLIEEAYH 360
+L+AC+ + EG+ R++ + T + C ++ M + G IE+A+
Sbjct: 620 GLLNACASPEALTEGR-------RLHAL-ITEAAFDCDVLVGTGLISMYTKCGSIEDAHQ 671
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQ 386
+ +P + N S + HG+
Sbjct: 672 VFHKLP-KKNVYSWTSMITGYAQHGR 696
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 41/310 (13%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
++L K VH L + L++ L + ++S F+ L ++LFN++P L ++
Sbjct: 530 LELGKWVHFL--IMKAGLESDLHVSNALVSMFVNCG---DLMSAKNLFNDMP-KRDLVSW 583
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT+I + + + + F M ++G++PD T+ ++ AC + G +H+LI +
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
D D +G L+ MY C I+ A VF ++P ++V SW+SMI G+ +AL++
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALEL 703
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F++M+ P+ +T V +SAC H+ + GL
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACA-----------HAGLIEEGL---------------- 736
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
H ++ K FN+ E ++ + M+ G N A+ KM ++PDS + A+
Sbjct: 737 --HHFQSMKEFNI--EPRMEHYGCMVDLFGRAGLLNEAVEFIIKM---QVEPDSRVWGAL 789
Query: 310 LSACS-HLGL 318
L AC HL +
Sbjct: 790 LGACQVHLNV 799
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 272/516 (52%), Gaps = 78/516 (15%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPV 62
+ L L+ T HLHQ H + + L + ++R + L+ + L +++F +
Sbjct: 16 QALTALTAT-SHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLHTH- 73
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F +NT+I A ++T ++S+ + ML G PDNFT+PF++K+ +G
Sbjct: 74 NPSPFMFNTIIMASSRT---LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQ 130
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKE------------------------------- 151
+H+ + K GLD D ++ N ++ +Y++ +E
Sbjct: 131 LHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSG 190
Query: 152 -IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK---------------- 194
ID A+ +F+ MP+++ VSW++MI+G+ ++A K+F M
Sbjct: 191 QIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQ 250
Query: 195 --LANES--------------PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ NE+ PN LVS VSAC L + G +HSY L ++V
Sbjct: 251 LGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVT 310
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
LGT L++MY KCG + A VFNLM E+N+ SW MI+GLA NG G A++LF KM G
Sbjct: 311 LGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVG 370
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
P++I+F A+L+ CSH GL+ EG+ F M +VY IKP ++HYGCMVD+LGRAGL++EA
Sbjct: 371 PSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEA 430
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+ MP +P++ + + +GACR HGQV L + LGK L+ LEP G Y L ++ +
Sbjct: 431 LDFVEKMPMKPHSELWGALVGACRIHGQV-ELGEELGKRLIDLEPHHGGRYALLCNIFAA 489
Query: 419 SGNWDTAAELMVAINQKGLN--KVPGCSWVKVNDGS 452
+ WD A MV +KG K PG + + +GS
Sbjct: 490 AQRWDDVA--MVRDLEKGRKVLKNPGNNGLGAEEGS 523
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 257/457 (56%), Gaps = 47/457 (10%)
Query: 41 FILTSLSISLHFTRS---------LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDE 91
FIL SL +HF +F N+P + ++N++I A+ + C E+++LF E
Sbjct: 172 FILNSL---IHFYAKCGELGLGYRVFVNIPRRD-VVSWNSMITAFVQGGCPEEALELFQE 227
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M ++P+ T V+ AC + G VHS I + + + N +L MY C
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFV-------------------------------AC 180
++ AK +F++MP +D+VSW++M+ G+ C
Sbjct: 288 VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQC 347
Query: 181 DSPSDALKVFHRMKLANES-PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P +AL++FH ++L+ + P+ VTLVS +SAC L + G IH Y G++L+ L
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
T+L++MY KCG ++KA VF+ + K++ W+ MI+GLA +G G AI+LF+KM + +
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV 467
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KP++++F+ IL ACSH+GLV+EG+ +F++M VY + P ++HY CMVD+LGRAGL+EEA
Sbjct: 468 KPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 527
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+I MP P A + + LGAC H V+ L + L++LEP YVL +++ + +
Sbjct: 528 ELIEKMPMAPAASVWGALLGACTIHENVV-LAEQACSQLIELEPGNHGAYVLLSNIYAKA 586
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
G WD + L + GL K PGCS ++V DG E
Sbjct: 587 GKWDRVSGLRKLMRDVGLKKEPGCSSIEV-DGIVHEF 622
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 180/334 (53%), Gaps = 9/334 (2%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT---SLSISLHFTRSLFNNLPVTP 64
+LI L Q+H L+T L + SR I S SL + + +F+ +P P
Sbjct: 40 SLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP-HP 98
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L+ +NTLIRAYA +S +S+ +F ML ++ PD FT+PF++KA + G +
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H ++ KV L SD +I N+L+ YA C E+ + VF +P RDVVSW+SMI FV P
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL++F M+ N PN +T+V ++SAC + G +HSY N + + L A+
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY+KCG VE A ++F+ M EK++ SWT M+ G A G + A +F M D
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ----DI 334
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
+++A++SA G E F E+ KP
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKP 368
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYA--ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+H+ + + GL D + + L+ A +D A+ VF+++P ++ +W+++I + +
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112
Query: 180 CDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+P +L +F RM + + P+ T L+ A + L + G++ H + L DV
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ +L+ Y+KCG + ++VF + +++ SW MI+ G A+ LF +M
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KP+ I+ +LSAC+ + G+ + R I ++ M+DM + G +E+A
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIER-NRIGESLTLSNAMLDMYTKCGSVEDA 291
Query: 359 YHIIRNMPTE 368
+ MP +
Sbjct: 292 KRLFDKMPEK 301
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 267/511 (52%), Gaps = 73/511 (14%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV-----TPP 65
Q + ++HHL Q H L L+T ++ I + + ++S + S ++L V P
Sbjct: 43 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 102
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------------- 111
+F +N +I+ + + ++I L+ EM+ RP+ +TYP V+KAC
Sbjct: 103 VFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHA 162
Query: 112 -----------------------------GRCLLIGIGGSVHSLIFKVGLDSDKYIG--- 139
R +L GG V ++ + +D G
Sbjct: 163 HLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE 222
Query: 140 ------------------NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
N ++ ++ C ++VA+ F+EM RD +SWS+MI G++
Sbjct: 223 AARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEG 282
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL++FH+M+ P L S++SAC +L + G IH+YA N ++LD LGT
Sbjct: 283 CFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT 342
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MY+KCG ++ A++VF M K + SW MI GLA +GR AI LF+KM + P
Sbjct: 343 SLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYP 399
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F +L+AC+H GLV +G F+ M + Y ++P +EHYGC+VD+LGRAGL+ EA +
Sbjct: 400 NEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 459
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ ++PTEP + + LGACR HG V L + +GK+LL+LEP+ Y L +++ + +G
Sbjct: 460 VSSIPTEPTPAVWGALLGACRKHGNV-ELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 518
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
W+ E+ + ++G+ PG S + + G
Sbjct: 519 WEEVGEVRKLMKERGIKTTPGTSIIDLGRGE 549
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 231/382 (60%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+N +I AY + ++ F +LK G++P++ T+ ++ C + +G VH LI
Sbjct: 481 AWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLI 540
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL+SD ++ N L+ M+ C ++ AK +F +MP RD+VSW+++IAGFV A
Sbjct: 541 MKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAF 600
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F M+ + P+ +T L++AC S + G +H+ + DV +GT L+ MY
Sbjct: 601 DYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG +E A +VF+ + +KN+ SWT MI+G A +GRG A+ LF +M Q G+KPD I+F
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
LSAC+H GL++EG ++F M + +NI+P MEHYGCMVD+ GRAGL+ EA I M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP++ + + LGAC+ H V L + + L+L+P +V+ +++ + +G W A+
Sbjct: 780 EPDSRVWGALLGACQVHLNV-ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAK 838
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + +G+ K PG SW++V+
Sbjct: 839 MRKVMLDRGVVKKPGQSWIEVD 860
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 184/334 (55%), Gaps = 5/334 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+++ ++++N L+ Y + E+ KL ++M++ ++PD T+ ++ AC
Sbjct: 165 KQIFDDMR-EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +++LI K G D+D ++G L+ M+ C +I A VF+ +P RD+V+W+SM
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G A +F RM+ P+ V VSL+ AC + G+ +H+ G
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ ++ +GTA++ MY+KCG +E A +VF+L++ +N+ SWT MI+G A +GR + A F K
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRA 352
MI++G++P+ ++F +IL ACS + G+ D + Y + ++ M +
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKC 461
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G +++A+ + + ++ N V + + A H Q
Sbjct: 462 GSLKDAHRVFEKI-SKQNVVAWNAMITAYVQHEQ 494
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 197/381 (51%), Gaps = 16/381 (4%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-------TRSLFNNLPVTPP 65
++ V +L+ L LK D + F+ T+L I++H +F+NLP T
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDL-----FVGTAL-INMHIKCGDIGDATKVFDNLP-TRD 276
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L + ++I A+ ++ LF M + G++PD + +++AC + G VH+
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ +VG D++ Y+G +L MY C ++ A VF+ + R+VVSW++MIAGF +
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A F++M + PN VT +S++ AC+S ++ G+ I + + G D + TAL+
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++ A +VF + ++N+ +W MI+ + + + A++ F +++ G+KP+S +
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F++IL+ C ++ GK + + ++ + +V M G + A ++ +M
Sbjct: 517 FTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 366 PTEPNAVILRSFLGACRNHGQ 386
P + V + + HG+
Sbjct: 576 PKR-DLVSWNTIIAGFVQHGK 595
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 175/345 (50%), Gaps = 33/345 (9%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N ++ +K E++++ + + + ++ TY +++ C + +G G +++ I K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G+ D ++ NTL+ MYA C AK +F++M +DV SW+ ++ G+V +A K+
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
+M + P+ T VS+++AC NV G +++ + G + D+ +GTAL+ M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG + A KVF+ + ++L +WT MI+GLA +GR A +LF +M + G++PD ++F ++
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 310 LSACSHLGLVDEGKNYFDEMARV---------------YNIKPTMEH------------- 341
L AC+H +++GK M V Y +ME
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 342 --YGCMVDMLGRAGLIEEAYHIIRNM---PTEPNAVILRSFLGAC 381
+ M+ + G I+EA+ M EPN V S LGAC
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 166/326 (50%), Gaps = 16/326 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I +A+ E+ F++M+++G+ P+ T+ ++ AC + G + I
Sbjct: 380 SWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ G SD + LL MYA C + A VFE++ ++VV+W++MI +V + +AL
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F + PNS T S+++ C S ++ G+ +H + GLE D+ + ALV M+
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF 559
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
CG + A +FN M +++L SW +I+G +G+ A F M ++G+KPD I+F+
Sbjct: 560 VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-------MVDMLGRAGLIEEAYH 360
+L+AC+ + EG+ R++ + T + C ++ M + G IE+A+
Sbjct: 620 GLLNACASPEALTEGR-------RLHAL-ITEAAFDCDVLVGTGLISMYTKCGSIEDAHQ 671
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQ 386
+ +P + N S + HG+
Sbjct: 672 VFHKLP-KKNVYSWTSMIAGYAQHGR 696
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 41/310 (13%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
++L K VH L + L++ L + ++S F+ L ++LFN++P L ++
Sbjct: 530 LELGKWVHFL--IMKAGLESDLHVSNALVSMFVNCG---DLMSAKNLFNDMP-KRDLVSW 583
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT+I + + + + F M ++G++PD T+ ++ AC + G +H+LI +
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
D D +G L+ MY C I+ A VF ++P ++V SW+SMIAG+ +AL++
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALEL 703
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F++M+ P+ +T V +SAC H+ + GL
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACA-----------HAGLIEEGL---------------- 736
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
H ++ K FN+ E ++ + M+ G N A+ KM ++PDS + A+
Sbjct: 737 --HHFQSMKEFNI--EPRMEHYGCMVDLFGRAGLLNEAVEFIIKM---QVEPDSRVWGAL 789
Query: 310 LSACS-HLGL 318
L AC HL +
Sbjct: 790 LGACQVHLNV 799
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 264/457 (57%), Gaps = 13/457 (2%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
L++ KT+ L Q+H + T L +T +SR +L S +I S+FN++P P +F
Sbjct: 15 LLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTHALSIFNHIP-NPTIFL 73
Query: 69 YNTLIRAYAKTSCSIE-SIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
YNTLI + A + L+ +L T L+P+ FT+P + KACG + G ++H+
Sbjct: 74 YNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTH 133
Query: 127 IFK-VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA-----C 180
+ K + D ++ LL YA C ++ + +F ++ D+ SW+S+++ +V C
Sbjct: 134 VLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAIC 193
Query: 181 DSPSDALKV---FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+ S +L+V F M+ + N VTLV+L+SAC L + G H Y + + L+L+
Sbjct: 194 EDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNH 253
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+GTAL++MYSKCG ++ A ++F+ + ++ + MI G A +G G+ A+ LF KM
Sbjct: 254 FVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLE 313
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
GL PD ++ + +CSH+GLV+EG + F+ M VY ++P +EHYGC+VD+LGRAG + E
Sbjct: 314 GLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLRE 373
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
A + NMP +PNAVI RS LGA R HG L + + + K L++LEPE NYVL +++ +
Sbjct: 374 AEERVLNMPMKPNAVIWRSLLGAARVHGN-LEIGEVVLKHLIQLEPETSGNYVLLSNMYA 432
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
WD + + G+NKVPG S V+V E
Sbjct: 433 SINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHE 469
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 255/483 (52%), Gaps = 42/483 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-----SLFNNLPVT 63
L+ KT+ L ++H L L N IS I S + F R LF+ +P
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYA---EFGRPADAGRLFDEIP-H 81
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ +L+ + K ++I +F + +G RPD F + A G IG V
Sbjct: 82 PDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVV 141
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC--- 180
H LIF+ GLDS+ + N L+ MY C + + A+ VF+ M V+D V+W SM+ G++ C
Sbjct: 142 HGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGV 201
Query: 181 ----------------------------DSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
P AL++F +M L PN +T+V ++SAC
Sbjct: 202 DSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSAC 261
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
+ + G +IH Y + ++ + AL++MY+K G + AF VF ++ K+ +WT
Sbjct: 262 ADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWT 321
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MIS G G A+ LF M+++G+ P+S++F ++LSACSH GL+ EG+ FD+M V
Sbjct: 322 TMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREV 381
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y+I P +EHYGCMVD+LGR GL+EEA +I +M EP+ VI RS L AC HG L +
Sbjct: 382 YHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGND-RLAE 440
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
G ++K EP YVL ++ +LS W A ++ + + + K PGCSW++V DG
Sbjct: 441 IAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEV-DGV 499
Query: 453 AEE 455
E
Sbjct: 500 VHE 502
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 253/448 (56%), Gaps = 22/448 (4%)
Query: 19 LHQLHTLFLKTS--LDHNTCIISRFIL------TSLSISLHFTRSLFNNLPVTPPLFAYN 70
L QLH + +K L + ++R + L + R +F+ +P + YN
Sbjct: 44 LAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYN 103
Query: 71 TLIRAYAKTS----CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
TL+R YA+ C+ E+ ++F M++ G+ PD +T+ ++KAC G H +
Sbjct: 104 TLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGV 163
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G +Y+ TL+ MYA C ++ A+ +F+ M VVS+++MI V P +A
Sbjct: 164 AVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEA 223
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F M+ P SVTL+S++SAC L + G IH Y L+ V + TAL++M
Sbjct: 224 LVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDM 283
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG +E A VF M ++ Q+W++M+ A++G G AIS+F +M + G+KPD ++F
Sbjct: 284 YAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTF 343
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH G+V EG YFD M R Y I ++HYGC+ D+L R+G +E AY I +P
Sbjct: 344 LGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELP 402
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNW 422
+P A++ R+ L AC HG V ++GK +L+L+ G +YV+ +++ + +G W
Sbjct: 403 IKPTAILWRTLLSACAGHGDV-----DMGKRVFERILELDDSHGGDYVIFSNLCANTGRW 457
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +++KG+ KVPGCS +++++
Sbjct: 458 EEMNMVRKLMSEKGVVKVPGCSSIEIDN 485
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 248/402 (61%), Gaps = 2/402 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + + +++ +I AY +++ LF ML +G+ PD T ++ AC
Sbjct: 185 AREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACS 243
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G +H +++K GLD D ++ L+ MY C+EI+ A+ +F++MP RD+V+W+
Sbjct: 244 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTV 303
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ C + +++L +F +M+ P+ V +V++V AC L + +I Y
Sbjct: 304 MIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 363
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+LDV LGTA+++M++KCG VE A ++F+ M EKN+ SW+ MI+ +G+G A+ LF
Sbjct: 364 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 423
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M+++G+ P+ I+ ++L ACSH GLV+EG +F M Y+++ ++HY C+VD+LGRA
Sbjct: 424 MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRA 483
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G ++EA +I +M E + + +FLGACR H V+ L + LL+L+P+ +Y+L
Sbjct: 484 GRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVV-LAEKAATSLLELQPQNPGHYILL 542
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+++ + +G W+ A+ ++Q+ L K+PG +W++V++ S +
Sbjct: 543 SNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQ 584
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 188/333 (56%), Gaps = 19/333 (5%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
++ +AK I F E+++ G RPDN+T PFV++AC + +G +H +++K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
LD D ++ L+ MY C+EI+ A+ +F++M RD+V+W+ MI G+ C +++L +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M+ P+ V +V++V AC L + I Y +LDV LGTA+++MY+KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
VE A ++F+ M EKN+ SW+ MI+ +G+G A+ LF M+ +G+ PD I+ +++L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 312 ACSHLGLVDEGKNYFDEMAR-----VYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRN 364
ACS L KN +M R VY ++H+ C +VDM G+ IE+A +
Sbjct: 241 ACSDL------KNL--QMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDK 292
Query: 365 MPTEPNAVILRSFLGA---CRNHGQVLYLDDNL 394
MP E + V +G C N + L L D +
Sbjct: 293 MP-ERDLVTWTVMIGGYAECGNANESLVLFDKM 324
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 20/412 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTC--IISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
+Q+ + +HH+ L LDH C ++ ++ + R LF+ + L
Sbjct: 46 LQMGRLIHHIVYKFGL----DLDHFVCAALVDMYVKCR---EIEDARFLFDKMQ-ERDLV 97
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+ +I YA+ + ES+ LF++M + G+ PD VV AC + + + I
Sbjct: 98 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 157
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ D +G ++ MYA C ++ A+ +F+ M ++V+SWS+MIA + AL
Sbjct: 158 QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 217
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M + P+ +TL SL+ AC+ L N++ G IH GL+LD + ALV+MY
Sbjct: 218 DLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 277
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KC +E A +F+ M E++L +WT+MI G A+ G N ++ LF KM + G+ PD ++
Sbjct: 278 GKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 337
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++ AC+ LG + + + D + R + + M+DM + G +E A I M
Sbjct: 338 TVVFACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRME- 395
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
E N + + + A HGQ G+ L L P + + +L ++ +S
Sbjct: 396 EKNVISWSAMIAAYGYHGQ--------GRKALDLFPMMLRSGILPNKITLVS 439
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 247/436 (56%), Gaps = 8/436 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H + +K+ LD + + + + + S +F R +FN++ L ++N++I + A++
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSCAQS 365
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVV-----KACGRCLLIGIGGSVHSLIFKVGLDS 134
S ES+ LF ++L GL+PD+FT + KACG +L+ G +H+ K G DS
Sbjct: 366 SLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 425
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D ++ + +L MY C ++ A VF + D V+W+SMI+G V + AL+++HRM+
Sbjct: 426 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 485
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ P+ T +L+ A + + + G +H+ + D +GT+LV+MY+KCG++E
Sbjct: 486 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 545
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A+++F M +N+ W M+ GLA +G A++LF M G++PD +SF ILSACS
Sbjct: 546 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 605
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GL E Y M Y I+P +EHY C+VD LGRAGL++EA +I MP + +A I
Sbjct: 606 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 665
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
R+ LGACR G V + L LEP A YVL +++ + + WD + + +
Sbjct: 666 RALLGACRIQGDV-ETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKR 724
Query: 435 KGLNKVPGCSWVKVND 450
K + K PG SW+ V +
Sbjct: 725 KNVKKDPGFSWIDVKN 740
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 17/350 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCS-----IESIKLFDEMLKTGL-RPDNF 102
SL R +F+ P L +N ++ AYA + S E + LF +L+ L
Sbjct: 127 SLSSARQVFDTTP-ERDLVTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRM 184
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
T V+K C + VH K+GL+ D ++ L+ +Y+ C + A+ +F+ M
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC--TSLINVRA 220
RDVV W+ M+ G+V +A ++F + P+ ++ +++ C ++
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ +H AV +GL+ DV++ +LV MYSK G A +VFN M+ +L SW MIS A
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364
Query: 281 NGRGNYAISLFAKMIQTGLKPD-----SISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
+ +++LF ++ GLKPD SI+ + AC L L+D+GK +
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKA-GF 423
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ ++DM + G + A I+ N + P+ V S + C ++G
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNG 472
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 5/207 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G H+ I G D ++ N LL MY+ C + A+ VF+ P RD+V+W++++ +
Sbjct: 95 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 154
Query: 179 ACDSPSDA-----LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
A +D L +F ++ + S +TL ++ C + + A E +H YA+ GL
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E DV + ALV +YSKCG + A +F+ MRE+++ W +M+ G G A LF++
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 274
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVD 320
++GL+PD S IL+ C G D
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGTDD 301
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 262/470 (55%), Gaps = 39/470 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIR 74
V +++ +K+ L+ +T + + + + + R +F +P + ++N LI
Sbjct: 148 VREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMP-QRDVVSWNVLIS 206
Query: 75 AYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
Y K +++ +F M + + LRP+ T + AC ++ +G +H + + L
Sbjct: 207 GYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLG 265
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD-----------S 182
IGN L+ MY C + +A+ +F +MP++ V+ W+SM++G+V C S
Sbjct: 266 FTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERS 325
Query: 183 P--------------------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P DA+ +F M++ SP+ TLV+L++ C L + G+
Sbjct: 326 PVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGK 385
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH Y N + +D +GTAL+EMY+KCG +EK+ ++FN ++EK+ SWT +I GLA NG
Sbjct: 386 WIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNG 445
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ + A+ LFA+M+QTG+KPD I+F +LSACSH GLV+EG+ +F M VY I+P +EHY
Sbjct: 446 KTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHY 505
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLGACRNHGQVLYLDDNLGKLLL 399
GC++D+LGRAG ++EA +I P N VI+ + L ACR HG V + + + K L+
Sbjct: 506 GCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNV-EMGERVAKRLV 564
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+E + + L A++ + + W+ ++ + G+ KVPGCS V+VN
Sbjct: 565 GIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVN 614
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 211/401 (52%), Gaps = 44/401 (10%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL--TSLSI-SLHFTRSLFNNLPVTPP 65
L++ K++ HL Q+ T L+T + +++F++ T SI +LH+ +FN + + P
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDI-PG 96
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF YN +I+A+ K +++ LF ++ + GL PDNFTYPFV KA G + G V+
Sbjct: 97 LFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYG 156
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K GL+ D Y+ N+L+ MYA + + VFEEMP RDVVSW+ +I+G+V C D
Sbjct: 157 FVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYED 216
Query: 186 ALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
A+ VF RM+ + PN T+VS +SAC +L + G+ IH Y V L + +G ALV
Sbjct: 217 AVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY-VREQLGFTIKIGNALV 275
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG---------------------- 282
+MY KCGH+ A ++FN M K + WT M+SG + G
Sbjct: 276 DMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTA 335
Query: 283 ---------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMA 330
R + A++LF +M + PD + A+L+ C+ LG +++GK Y DE
Sbjct: 336 MINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENK 395
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+ + +++M + G IE++ I + + A
Sbjct: 396 IMIDAVVGT----ALIEMYAKCGFIEKSLEIFNGLKEKDTA 432
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 237/400 (59%), Gaps = 7/400 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
LH + +F+ +P + ++ T+I AY+ + ++++ ML+ G+RP+ FTY V++
Sbjct: 16 LHDAQDVFDKMP-DRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLR 74
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + +H I K+GLDSD ++ + L+ +Y+ E++ A VF+EM D+V
Sbjct: 75 ACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVV 131
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WSS+IAGF +AL++F RMK A TL S++ ACT L + G +H + +
Sbjct: 132 WSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVL 191
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+ D+ L AL++MY KCG +E A VF M EK++ SW+ MI+GLA NG A+
Sbjct: 192 --KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALK 249
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF M G+KP+ ++ +L ACSH GLV+EG YF M ++ I P EHYGCM+D+L
Sbjct: 250 LFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLL 309
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GRAG + EA +I M EP+AV R+ L ACR H V + + K +L+L+P+ Y
Sbjct: 310 GRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV-DVAIHAAKQILRLDPQDAGTY 368
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
VL +++ + + W+ AE+ + +G+ K PGCSW++V+
Sbjct: 369 VLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVS 408
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 6/229 (2%)
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ N L+ MY + A+ VF++MP R+VVSW++MI+ + A AL+ M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
PN T S++ AC L N+R +H + GL+ DV + +AL+++YS+ G +E A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF+ M +L W+ +I+G A N G+ A+ LF +M + G + +++L AC+ L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
L++ G+ V + ++DM + G +E+A + M
Sbjct: 178 ALLELGRQVH---VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM 223
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 245/431 (56%), Gaps = 33/431 (7%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ V L ++N++I Y + + E++ + EM G++PD T VV
Sbjct: 158 LDGARKMFDKSCVRD-LVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVS 216
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI----------------- 152
+C + + +G H I + GL + N L+ MY C +
Sbjct: 217 SCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVS 276
Query: 153 --------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
D+A +F+EMP +DVV W++MI G+V + +AL +F+ M+ N
Sbjct: 277 WTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI 336
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P+ VT+VS +SAC+ L + G IH Y + L L+VALGTAL++MY+KCG + KA +
Sbjct: 337 NPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQ 396
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF + +N +WT +ISGLA +G + AI+ F++MI + PD ++F +LSAC H GL
Sbjct: 397 VFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGL 456
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+EG+ YF +M+ +N+ P ++HY CMVD+LGRAGL+EEA +I++MP E +AV+ +
Sbjct: 457 VEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALF 516
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR HG VL + + LL+++P YVL A++ + W A + + Q+G+
Sbjct: 517 FACRIHGNVL-MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVE 575
Query: 439 KVPGCSWVKVN 449
K PGCS ++VN
Sbjct: 576 KTPGCSSIEVN 586
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 209/417 (50%), Gaps = 46/417 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVT 63
+L++ K++ L Q+ + + T L + SR I ++ + T LFN
Sbjct: 11 SLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTR--N 68
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F++N IR + + E++ L+ +L+ G +PDN+TYP + KAC R LI +G
Sbjct: 69 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+ + +G DSD ++ N ++ + +C ++D A+ +F++ VRD+VSW+SMI G+V
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 188
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+AL + MK+ P+ VT++ +VS+C L ++ G H Y NGL+L V L A
Sbjct: 189 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANA 248
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG-------------------- 282
L++MY KCG++E A K+F+ M K + SWT M+ G A +G
Sbjct: 249 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPW 308
Query: 283 -----------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDE 328
RG A++LF +M + PD ++ + LSACS LG +D G +Y ++
Sbjct: 309 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 368
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
N+ ++DM + G I +A + + +P N++ + + HG
Sbjct: 369 HELSLNVALGT----ALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHG 420
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 273/498 (54%), Gaps = 49/498 (9%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDH---NTCIISRFILT---SLSISLHFTRSLFNN 59
+ LI+ K + L + HT LK+ H +I+R + S S + ++F+
Sbjct: 21 LSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHM 80
Query: 60 LPVTPPLFAYNTLIRAYAKTSCS-----IESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+ P L AYN +IRAY +++ L+ +M + P+ T+PF++K C +
Sbjct: 81 IK-NPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQW 139
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM- 173
L G ++H+ + K G D Y+ N+L+ +Y A + A+ VF+EM V DVV+W+SM
Sbjct: 140 LDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMV 199
Query: 174 ------------------------------IAGFVACDSPSDALKVFHRMKLANES---P 200
I G S ++L++FH M++ ++ P
Sbjct: 200 IGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKP 259
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +T+ S++SAC L + G+ +H Y NG+E DV +GTALV MY KCG V+KAF++F
Sbjct: 260 DKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIF 319
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M EK+ +WT+MIS A +G G A + F +M + G+KP+ ++F +LSAC+H GLV+
Sbjct: 320 EEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVE 379
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G+ FD M RVY+I+P + HY CMVD+L RA L +E+ +IR+MP +P+ + + LG
Sbjct: 380 QGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGG 439
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL-NK 439
C+ HG V L + + L+ LEP A YV + + +G +D A + + +K + K
Sbjct: 440 CQMHGNV-ELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKK 498
Query: 440 VPGCSWVKVNDGSAEEMS 457
+PGCS +++N G +E S
Sbjct: 499 IPGCSMIEIN-GEVQEFS 515
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 274/499 (54%), Gaps = 46/499 (9%)
Query: 2 ISRHIETL-IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSL 56
+ H+E + +++ L Q H+ ++ L + +I I S S +L + L
Sbjct: 20 VQMHVEPFHFEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKL 79
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSC--SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
F+++P P F YNT+I+ + + + + L+ ML+ + P+NFT+P ++ AC +
Sbjct: 80 FDSIP-QPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK- 137
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
I G +H+ +FK G + N+L+ MY + ++ A+ VF +P D VSW+S+I
Sbjct: 138 --IQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLI 195
Query: 175 AGF-------------------------------VACDSPSDALKVFHRMKLANESP-NS 202
+G+ V + +A +F RMK N + +
Sbjct: 196 SGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDK 255
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+++SACT L + G+ IH Y NG+ELD L TA+V+MY KCG +EKA +VF+
Sbjct: 256 FVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHS 315
Query: 263 MRE--KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ + + SW MI GLA +G G AI LF +M + + PD I+F +L+AC+H GLV+
Sbjct: 316 LPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVE 375
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+NYF M RVY I+P MEH+GCMVD+LGRAG++ EA +I MP P+ +L + LGA
Sbjct: 376 EGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGA 435
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C+ H + L + +G+ +++LEP YVL A++ + +G W+ AA++ ++ +G+ K
Sbjct: 436 CKKHRNI-ELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKA 494
Query: 441 PGCSWVKVNDGSAEEMSKE 459
PG S +++ E ++ E
Sbjct: 495 PGFSMIELQGTVHEFIAGE 513
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 238/397 (59%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P T ++N +I YA+ S E++ LF+ M++ G+ + + ++ACG
Sbjct: 216 RVVFDWMP-TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGE 274
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH L+ ++GLDS+ + N L+ MY+ CK +D+A VF+E+ R VSW++M
Sbjct: 275 LGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G DA+++F RM+L N P+S TLVS++ A + + IH Y++ L
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ DV + TAL++MY+KCG V A +FN RE+++ +W MI G +G G A+ LF +
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+ P+ +F ++LSACSH GLVDEG+ YF M Y ++P MEHYG MVD+LGRAG
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
++EA+ I+ MP +P + + LGAC+ H V +++ K + +L P+ G +VL A
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK-IFELGPQEGVYHVLLA 573
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + + W A + A+ + GL K PG S +++ +
Sbjct: 574 NIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ +RA A S ++ F M G P T+ ++K C + G +VH+ +
Sbjct: 27 HHARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLA 86
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G+DS+ L MYA C+ A+ VF+ MPVRD V+W++++AG+ A++
Sbjct: 87 ARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAME 146
Query: 189 VFHRMKLAN-ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ RM+ E P+S+TLVS++ AC + + A H++A+ +GLE V + TA+++ Y
Sbjct: 147 MVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG + A VF+ M KN SW MI G A NG A++LF +M++ G+ +S
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII----R 363
A L AC LG +DEG + + R+ + + ++ M + ++ A H+ R
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDR 325
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLY 389
NA+IL C L+
Sbjct: 326 RTQVSWNAMILGCAQNGCSEDAVRLF 351
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACG 112
R +F+ +PV + A+N L+ YA+ + ++++ M + G RPD+ T V+ AC
Sbjct: 114 RRVFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ H+ + GL+ + +L Y C +I A+ VF+ MP ++ VSW++
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ +AL +F+RM V++++ + AC L + G +H V G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ +V++ AL+ MYSKC V+ A VF+ + + SW MI G A NG A+ LF
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDM 348
+M +KPDS + +++ A L D Y+I+ ++ ++DM
Sbjct: 353 RMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G + A I+ N E + + + + +HG
Sbjct: 408 YAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG 443
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 253/448 (56%), Gaps = 48/448 (10%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK-----TSCSIESIKLFDEMLKTG 96
+++S +LHF+ + F +NTLIRA+ + T + I +F M G
Sbjct: 7 LISSTHPTLHFSHPTLES-------FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG 59
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK 156
++PD T+PF++++ L+ +G SVH+ I + GL D ++ +L+ MY++C + A+
Sbjct: 60 VQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFAR 119
Query: 157 AVFEE-------------------------------MPVRDVVSWSSMIAGFVACDSPSD 185
VF+E MP R+V+SWS MI G+V C +
Sbjct: 120 QVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKE 179
Query: 186 ALKVFHRMKLA---NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
AL +F M++ + PN T+ +++AC L + G+ H+Y G+ +DV LGTA
Sbjct: 180 ALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTA 239
Query: 243 LVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
L++MY+KCG VEKA VF NL K++ +W+ MISGLA +G + LF+KMI G++P
Sbjct: 240 LIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRP 299
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
++++F A+ AC H GLV EGK+Y M Y+I PT++HYGCMVD+ GRAG I+EA+++
Sbjct: 300 NAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNV 359
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+++MP EP+ ++ + L R HG + + L K L++LEP YVL ++V + G
Sbjct: 360 VKSMPMEPDVLVWGALLSGSRMHGDIETCELALKK-LIELEPTNSGAYVLLSNVYAKRGR 418
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W+ + + G+ KVPGCS ++V
Sbjct: 419 WEDVRHVRDLMETMGIKKVPGCSLIEVG 446
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 241/419 (57%), Gaps = 41/419 (9%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG------S 122
++ LIRA ++++ ++ L+ +L+ GL P T P ++K+ L + G +
Sbjct: 40 HDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMA--LSPAVPGAAVLALT 97
Query: 123 VHSLIFKVGLDS--------------------------------DKYIGNTLLRMYAACK 150
VH+ K+GLD D NTL+ YA
Sbjct: 98 VHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAG 157
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
+ A+A+F+EMP R+ VSWS+M+ G+V +AL++F RM+ + P+ LV +++
Sbjct: 158 RLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLA 217
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC + G+ +H Y +G+++++ GTALV+MYSKCG V+ A VF M+ KN+ +
Sbjct: 218 ACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLA 277
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT MI GLA +GRG+ A+ LFA+M +G++PD I+F +L AC+H GLVD+G+ FD M
Sbjct: 278 WTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMV 337
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
R Y IKP +EHYGCMVD+L R G + EA +I+ MP EP+A+I + + CR H V +
Sbjct: 338 RKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFA 397
Query: 391 DDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + K + LEP+ YVL +++ + SG +A E+ + +KG++K PGCS V+VN
Sbjct: 398 -EYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVN 455
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 44/266 (16%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R+LF+ +P + +++ ++ Y + E++++F M +RPD+ V+ AC
Sbjct: 162 ARALFDEMPARNAV-SWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACA 220
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + G VH + G+ + + G L+ MY+ C E+ +A VFE M ++V++W++
Sbjct: 221 QHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTT 280
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G S+A+ +F +M+ + P+ + + ++ ACT
Sbjct: 281 MIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACT------------------- 321
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-----NLQSWTIMISGLADNGRGNYA 287
G V+K ++F+ M K ++ + M+ LA NG A
Sbjct: 322 ----------------HAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEA 365
Query: 288 ISLFAKMIQTGLKPDSISFSAILSAC 313
+ KM ++PD++ + A+++ C
Sbjct: 366 KEMIQKM---PMEPDALIWGALMAGC 388
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 248/448 (55%), Gaps = 37/448 (8%)
Query: 33 HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM 92
HN I LS++ +FN V L +N++I K +IE+IK++ EM
Sbjct: 196 HNASITMLLSCGELSVAY----DVFNKSRVRD-LVTWNSMITGCVKRGLAIEAIKIYKEM 250
Query: 93 LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI 152
+RP+ T ++ +C + + +G H I + GL+ + N L+ MY C E+
Sbjct: 251 EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGEL 310
Query: 153 -------------------------------DVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
DVA+ + ++P + VV W+++I+G V
Sbjct: 311 LTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAK 370
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL +FH M++ P+ VT+V+ +SAC+ L + G IH Y + L +DVALGT
Sbjct: 371 QGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGT 430
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MY+KCG++ +A +VF + ++N +WT +I GLA +G A+S F+KMI G+ P
Sbjct: 431 ALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVP 490
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+F +LSAC H GLV+EG+ YF EM+ +N+ P ++HY CMVD+LGRAG +EEA +
Sbjct: 491 DEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEEL 550
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
++NMP +A +L + ACR +G V + + LL+++P+ NYVL AS+ S +
Sbjct: 551 VKNMPMAADAAVLGALFFACRVYGNV-QIGERTAFKLLEIDPQDSGNYVLLASMYSEAKM 609
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W A +N KG+ K PGCS V++N
Sbjct: 610 WKEARSARKLMNDKGVEKTPGCSLVEIN 637
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 191/399 (47%), Gaps = 47/399 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHF-TRSLFNNLPVT 63
++++ K++ L Q+ + T L N SR F S S L + TR L+ +
Sbjct: 62 SILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELN 121
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKAC----GRCLLIG 118
+F++N IR Y ++ L+ ML G L+PDN TYP ++K C CL +G
Sbjct: 122 --VFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLG 179
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+ G V K G + D ++ N + M +C E+ VA VF + VRD+V+W+SMI G V
Sbjct: 180 VLGHV----LKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCV 235
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+A+K++ M+ PN +T++ ++S+C+ + ++ G+ H Y +GLE +
Sbjct: 236 KRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP 295
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG---------------- 282
L AL++MY KCG + A +F+ M +K L SWT M+ G A G
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 283 ---------------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+G A++LF +M ++PD ++ LSACS LG +D G
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH 415
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R + + + +VDM + G I A + +P
Sbjct: 416 YIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIP 453
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 238/397 (59%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P T ++N +I YA+ S E++ LF+ M++ G+ + + ++ACG
Sbjct: 216 RVVFDWMP-TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGE 274
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH L+ ++GLDS+ + N L+ MY+ CK +D+A VF+E+ R VSW++M
Sbjct: 275 LGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G DA+++F RM+L N P+S TLVS++ A + + IH Y++ L
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ DV + TAL++MY+KCG V A +FN RE+++ +W MI G +G G A+ LF +
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+ P+ +F ++LSACSH GLVDEG+ YF M Y ++P MEHYG MVD+LGRAG
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
++EA+ I+ MP +P + + LGAC+ H V +++ K + +L P+ G +VL A
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK-IFELGPQEGVYHVLLA 573
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + + W A + A+ + GL K PG S +++ +
Sbjct: 574 NIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 156/310 (50%), Gaps = 6/310 (1%)
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
++ F M G P T+ ++K C + G +VH+ + G+DS+ L
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN-ESPNSV 203
MYA C+ A+ VF+ MPVRD V+W++++AG+ A+++ RM+ E P+S+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TLVS++ AC + + A H++A+ +GLE V + TA+++ Y KCG + A VF+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
KN SW MI G A NG A++LF +M++ G+ +S A L AC LG +DEG
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII----RNMPTEPNAVILRSFLG 379
+ + R+ + + ++ M + ++ A H+ R NA+IL
Sbjct: 283 RVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 380 ACRNHGQVLY 389
C L+
Sbjct: 342 GCSEDAVRLF 351
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACG 112
R +F+ +PV + A+N L+ YA+ + ++++ M + G RPD+ T V+ AC
Sbjct: 114 RRVFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ H+ + GL+ + +L Y C +I A+ VF+ MP ++ VSW++
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ +AL +F+RM V++++ + AC L + G +H V G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ +V++ AL+ MYSKC V+ A VF+ + + SW MI G A NG A+ LF
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDM 348
+M +KPDS + +++ A L D Y+I+ ++ ++DM
Sbjct: 353 RMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G + A I+ N E + + + + +HG
Sbjct: 408 YAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG 443
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 274/524 (52%), Gaps = 70/524 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI----SLHFTRSLFNNL 60
H +L+Q K L QLHTL +KTSL R +L+ S SL++ + LF+ +
Sbjct: 33 HAISLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTV 92
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIG 118
+ F Y T+I+AYA E+ + ML + + P++FT+ +V AC + +
Sbjct: 93 DIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVF 152
Query: 119 IGGSVHSLI----FKVGLDS----------------------DKYIG------NTLLRMY 146
G H+ + F+ G+ S DK G N L+ Y
Sbjct: 153 EGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGY 212
Query: 147 AACKEIDVAKAVFEEMPVRDVVSW-------------------------------SSMIA 175
++D A+ +F+EMP RDVVSW S++I
Sbjct: 213 VKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIK 272
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G++ S AL++F M++A + V + +L+SAC L + G +H Y +G+++
Sbjct: 273 GYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKV 332
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D L TAL++MYSKCG ++ A+KVF +K + W+ MI GLA + G AI LFAKMI
Sbjct: 333 DAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMI 392
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G++P I++ IL+AC+H GLVD G F+ M KP M+HYGC+VD+LGRAGL+
Sbjct: 393 ECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLL 452
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+A+ ++ MP + + I R+ L AC+ H V L + +G++L+K+EP+ NYVL ++V
Sbjct: 453 HDAFRVVETMPVKADPAIWRALLSACKLHRNV-ELGEQVGRILIKMEPQNDMNYVLFSNV 511
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+ WD + +L + +G+ K PGCS +++N E +S++
Sbjct: 512 YAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRD 555
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 258/443 (58%), Gaps = 16/443 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLH-----FTRSL--FNNLPVTPPLFAYNTLI 73
++H+L +K DH+ F+ TSL +SL+ F +L F+++P + ++ +I
Sbjct: 135 KIHSLLVKAGYDHDV-----FVKTSL-LSLYVKCDNFDDALKVFDDIP-DKNVVSWTAII 187
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
Y + E+I F ++L+ GL+PD+F+ V+ AC R G + I G+
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ ++ +LL MY C ++ A +F MP +D+VSWS+MI G+ P AL +F +M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ N P+ T+V ++SAC +L + G S N + LGTAL++MYSKCG V
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+A+++F M++K+ W M+ GL+ NG SLF+ + + G++PD +F +L C
Sbjct: 368 TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+H G V+EG+ +F+ M RV+++ P++EHYGCMVD+LGRAGL+ EA+ +I NMP +PNAV+
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
+ LG C+ H +L + + K L++LEP NYV +++ S + W+ A ++ +
Sbjct: 488 WGALLGGCKLHKDT-HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 434 QKGLNKVPGCSWVKVNDGSAEEM 456
++ + K+ CSW+++ DG E
Sbjct: 547 EQQIQKIRACSWIEI-DGIVHEF 568
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 216/395 (54%), Gaps = 9/395 (2%)
Query: 1 MISRHIETLIQLSKTVHHLHQL---HTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSL 56
+ S+ +E LS ++ +QL H L+ LD + +++ + +L S ++++ +
Sbjct: 11 VFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLV 70
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + P +F +NT+IR C ++I L+ M G P+NFT PFV+KAC R L
Sbjct: 71 FSQVK-EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ +G +HSL+ K G D D ++ +LL +Y C D A VF+++P ++VVSW+++I G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+++ +A+ F ++ P+S +LV +++AC L + +GE I Y +G+ +
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
V + T+L++MY KCG++E+A +F+ M EK++ SW+ MI G A NG A+ LF +M
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLI 355
LKPD + +LSAC+ LG +D G M R + P + ++DM + G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSV 367
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRN-HGQVLY 389
+A+ I M + V +G N H + ++
Sbjct: 368 TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVF 402
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 237/415 (57%), Gaps = 32/415 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +N++I K +IE+IK++ EM +RP+ T ++ +C + + +G H
Sbjct: 224 LVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHC 283
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEI-------------------------------DV 154
I + GL+ + N L+ MY C E+ DV
Sbjct: 284 YIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDV 343
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ + ++P + VV W+++I+G V +AL +FH M++ P+ VT+V+ +SAC+
Sbjct: 344 AREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQ 403
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G IH Y + L +DVALGTALV+MY+KCG++ +A +VF + ++N +WT +
Sbjct: 404 LGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAV 463
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I GLA +G A+S F+KMI G+ PD I+F +LSAC H GLV+EG+ YF EM+ +N
Sbjct: 464 ICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFN 523
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
+ P ++HY CMVD+LGRAG +EEA +++NMP +A +L + ACR +G V + +
Sbjct: 524 VSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNV-QIGERT 582
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LL+++P+ NYVL AS+ S + W A +N KG+ K PGCS V++N
Sbjct: 583 AFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEIN 637
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 191/399 (47%), Gaps = 47/399 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHF-TRSLFNNLPVT 63
++++ K++ L Q+ + T L N SR F S S L + TR L+ +
Sbjct: 62 SILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELN 121
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKAC----GRCLLIG 118
+F++N IR Y ++ L+ ML G L+PDN TYP ++K C CL +G
Sbjct: 122 --VFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLG 179
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+ G V K G + D ++ N + M +C E+ VA VF + VRD+V+W+SMI G V
Sbjct: 180 VLGHV----LKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCV 235
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+A+K++ M+ PN +T++ ++S+C+ + ++ G+ H Y +GLE +
Sbjct: 236 KRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP 295
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG---------------- 282
L AL++MY KCG + A +F+ M +K L SWT M+ G A G
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 283 ---------------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+G A++LF +M ++PD ++ LSACS LG +D G
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH 415
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R + + + +VDM + G I A + +P
Sbjct: 416 YIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIP 453
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 261/454 (57%), Gaps = 28/454 (6%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSL--FNNLP 61
+L++L K++H +K +D + T ++S + FT +L FN +
Sbjct: 444 SLLKLGKSIH------CFTVKADMDSDLSTGTALVSMYAKCGF-----FTAALTTFNRMS 492
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ + +N+LI YA+ +I +F ++ + + PD T VV AC + G
Sbjct: 493 -SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVAC 180
+H LI K+G +SD ++ N L+ MYA C + A+ +F + +D V+W+ +IA ++
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+A+ FH+M+L N PNSVT VS++ A L R G + H+ + G + +G
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
+L++MY+KCG ++ + K+FN M K+ SW M+SG A +G G+ AI+LF+ M ++ ++
Sbjct: 672 NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
DS+SF ++LSAC H GLV+EG+ F M+ Y+IKP +EHY CMVD+LGRAGL +E
Sbjct: 732 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVS 416
I+ MP EP+A + + LG+CR H V LG++ L+KLEP A++V+ +S+
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNV-----KLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ SG W A + +N GL K PGCSWV++ +
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTP 64
H L+ K ++ L Q+H + + H+ I L SL RS+F++ P P
Sbjct: 34 HYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTP-NP 92
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+N++IRAY ++ E+++++ M++ GL PD +T+ FV+KAC L + G H
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFH 152
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
I + GL+ D +IG L+ MY+ ++ A+ VF++MP RDVV+W++MIAG + P
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC 212
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ F M+L P+SV+L++L L N+ SIH Y V + A+ L+
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGY--VFRRDFSSAVSNGLI 270
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
++YSKCG V+ A +VF+ M +++ SW M++G A NG + LF KM ++ + +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 305 S-FSAILSACSHLGLVDEGK 323
S SA L+A + L ++GK
Sbjct: 331 SAVSAFLAAAETIDL-EKGK 349
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 146/269 (54%), Gaps = 1/269 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + V ++ T++ YA C +E ++LFD+M +R + + A
Sbjct: 283 RRVFDQM-VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + +DSD + L+ MYA C E + AK +F + RD+V+WS++
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA V P +AL +F M+ PN VTL+S++ AC L ++ G+SIH + V +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM 461
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D++ GTALV MY+KCG A FN M +++ +W +I+G A G AI +F K
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEG 322
+ + + PD+ + ++ AC+ L +D+G
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQG 550
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 2/301 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L A++ +I A +T E++ LF EM ++P+ T ++ AC L+ +G S+H
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K +DSD G L+ MYA C A F M RD+V+W+S+I G+ P +
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ +F++++L+ +P++ T+V +V AC L ++ G IH V G E D + AL++
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALID 574
Query: 246 MYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + A +FN K+ +W ++I+ NG AIS F +M P+S+
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F ++L A ++L EG + + ++ + T+ ++DM + G ++ + +
Sbjct: 635 TFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLDYSEKLFNE 693
Query: 365 M 365
M
Sbjct: 694 M 694
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 152/279 (54%), Gaps = 11/279 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT----YP 105
L R +F+ +P + A+N +I +++ E++ F M G+ P + + +P
Sbjct: 180 LKRAREVFDKMP-KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+ K I + S+H +F+ D + N L+ +Y+ C ++DVA+ VF++M +
Sbjct: 239 GICKLSN----IELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSW +M+AG+ + L++F +MKL N N V+ VS A I++ G+ IH
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
A+ ++ D+ + T L+ MY+KCG EKA ++F ++ ++L +W+ +I+ L G
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
A+SLF +M +KP+ ++ +IL AC+ L L+ GK+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH+ +V+G + ++ T L+ +YS + A VF+ + W MI +
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ N A+ ++ M++ GL+PD +F+ +L AC+ + EG + E+ R +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMP 366
G +VDM + G ++ A + MP
Sbjct: 169 G-LVDMYSKMGDLKRAREVFDKMP 191
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 267/465 (57%), Gaps = 12/465 (2%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E +++ V L Q+H + TS + ++++ I + S ++ +T LF ++P+ P
Sbjct: 13 EAIVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPL-PD 71
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +N++I++ +K + + + ML + + P N+T+ V+K+C + IG VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHC 131
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
G D Y+ L+ Y+ C +++ A+ VF+ MP + VV+W+S+++GF D
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAED 191
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++VF++M+ + P+S T VSL+SAC + G +H Y V GL+++V LGTAL+
Sbjct: 192 AIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALIN 251
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSI 304
+YS+CG V KA +VF+ M+E N+ +WT MIS +G G A+ LF KM G P+++
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNV 311
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F A+LSAC+H GLV++G++ + M Y + P +EH+ C+VDMLGRAG ++EAY I+
Sbjct: 312 TFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQ 371
Query: 365 MPTEPNAV---ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ NA + + LGAC+ H + L + K L+ LEPE ++V+ +++ +LSG
Sbjct: 372 LDATGNATAPALWTAMLGACKMH-RNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGK 430
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGS-----AEEMSKETA 461
D + + + + L K G S ++V + + +E +ET
Sbjct: 431 TDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETG 475
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 247/431 (57%), Gaps = 4/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH + + +N + ++ + S+ SL LF+ +P LF +N LIRAYA
Sbjct: 79 QLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP-KGNLFLWNVLIRAYAWN 137
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+I L+ +ML+ GL+PDNFT PFV+KAC IG G +H + + G + D ++G
Sbjct: 138 GPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVG 197
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ MYA C + A+ VF+++ RD V W+SM+A + P ++L + M
Sbjct: 198 AALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVR 257
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P TLV+++S+ + + G IH + +G + + + TAL++MY+KCG V+ A +
Sbjct: 258 PTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVL 317
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +REK + SW +I+G A +G A+ LF +M++ +PD I+F L+ACS L+
Sbjct: 318 FERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLL 376
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG+ ++ M R I PT+EHY CMVD+LG G ++EAY +IR M P++ + + L
Sbjct: 377 DEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLN 436
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+C+ HG V + L K L++LEP+ NYV+ A++ + SG W+ A L + KG+ K
Sbjct: 437 SCKTHGNVELAEVALEK-LIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKK 495
Query: 440 VPGCSWVKVND 450
CSW++V +
Sbjct: 496 NIACSWIEVKN 506
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 169/367 (46%), Gaps = 26/367 (7%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
IL+ LS SL N PV+P F L +++A + F P N
Sbjct: 15 ILSILSFSL-------NLFPVSPYYF----LHQSFATQLIPQHKVDSFPS------SPSN 57
Query: 102 -FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
+ Y ++++C + G +H+ + ++G+ + + L+ Y+ C + A +F+
Sbjct: 58 HYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFD 117
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
++P ++ W+ +I + A+ ++H+M P++ TL ++ AC++L +
Sbjct: 118 KIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGE 177
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IH + +G E DV +G ALV+MY+KCG V A VF+ + +++ W M++ A
Sbjct: 178 GRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQ 237
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR---VYNIKP 337
NG + ++SL +M G++P + ++S+ + + + G+ R YN K
Sbjct: 238 NGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKV 297
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
++DM + G ++ A + + E V + + HG + D ++
Sbjct: 298 KT----ALIDMYAKCGSVKVACVLFERL-REKRVVSWNAIITGYAMHGLAVEALDLFERM 352
Query: 398 LLKLEPE 404
+ + +P+
Sbjct: 353 MKEAQPD 359
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 257/443 (58%), Gaps = 16/443 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLH-----FTRSL--FNNLPVTPPLFAYNTLI 73
++H+L +K DH+ F+ TSL +SL+ F +L F+++P + ++ +I
Sbjct: 135 KIHSLLVKAGYDHDV-----FVKTSL-LSLYVKCDNFDDALKVFDDIP-DKNVVSWTAII 187
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
Y + E+I F ++L+ GL+PD+F+ V+ AC R G + I G+
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ ++ +LL MY C ++ A +F MP +D+VSWS+MI G+ P AL +F +M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ N P+ T+V ++SAC +L + G S N + LGTAL++MYSKCG V
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+A+++F M+ K+ W M+ GL+ NG SLF+ + + G++PD +F +L C
Sbjct: 368 TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+H G V+EG+ +F+ M RV+++ P++EHYGCMVD+LGRAGL+ EA+ +I NMP +PNAV+
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
+ LG C+ H +L + + K L++LEP NYV +++ S + W+ A ++ +
Sbjct: 488 WGALLGGCKLHKDT-HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 434 QKGLNKVPGCSWVKVNDGSAEEM 456
++ + K+ CSW+++ DG E
Sbjct: 547 EQQIQKIRACSWIEI-DGIVHEF 568
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 216/395 (54%), Gaps = 9/395 (2%)
Query: 1 MISRHIETLIQLSKTVHHLHQL---HTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSL 56
+ S+ +E LS ++ +QL H L+ LD + +++ + +L S ++++ +
Sbjct: 11 VFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLV 70
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + P +F +NT+IR C ++I L+ M G P+NFT PFV+KAC R L
Sbjct: 71 FSQVK-EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ +G +HSL+ K G D D ++ +LL +Y C D A VF+++P ++VVSW+++I G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+++ +A+ F ++ P+S +LV +++AC L + +GE I Y +G+ +
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
V + T+L++MY KCG++E+A +F+ M EK++ SW+ MI G A NG A+ LF +M
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLI 355
LKPD + +LSAC+ LG +D G M R + P + ++DM + G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSV 367
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRN-HGQVLY 389
+A+ I M + V +G N H + ++
Sbjct: 368 TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVF 402
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 271/482 (56%), Gaps = 55/482 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAY 69
K++ L Q+H +KT+L ++ +SR I L+ +S L + S+F+ + P F +
Sbjct: 17 KSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ-HPNSFIF 75
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-----TGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LI+ ++ TS +ES+ L+ ML +G+ F+ P V+KACG+ L G VH
Sbjct: 76 FALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFDEGRQVH 132
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS-- 182
+ K L D ++GN+++RMY EI++A+ VF+ MP RDVVSW+SMIAG++
Sbjct: 133 GQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIE 192
Query: 183 -----------------------------PSDALKVFHRMKLANESPNSVTLVSLVSACT 213
P AL +F M P+ +VS++SA
Sbjct: 193 LAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIA 252
Query: 214 SLINVRAGESIHSYAVVNGLELDVA-LGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSW 271
L V G+ +H+Y +N +EL +G+AL++MYSKCG++E A+ VF ++ +N+ W
Sbjct: 253 DLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDW 312
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MISGLA +G A+ +F +M + ++P+ I+F +LS CSH GLV+EG+ YF+ M
Sbjct: 313 NSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHE 372
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y I P ++HYGCM+D+ GRAG +E+A +I+NMP E + + ++ L A HG +
Sbjct: 373 KYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHI---- 428
Query: 392 DNLGK----LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+GK ++L P+ ++YVL +++ + +G WD A++ + + Q+G+ K+ GCS +
Sbjct: 429 -EIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 487
Query: 448 VN 449
VN
Sbjct: 488 VN 489
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 264/452 (58%), Gaps = 11/452 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCII--SRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
L Q+H ++ HN+ + SR + S I + +FN + P F +NTLI A
Sbjct: 41 LKQIHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDYACRVFNQID-NPNSFMWNTLIGAC 99
Query: 77 AKTSCSIE-SIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
A++ E +I++F ML+ G + PD T+PF++KAC + G H+ IFK+GLD
Sbjct: 100 ARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDL 159
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D Y+GN+L+ +YA+C + +A VFE+MP+R +VSW+ MI +V +ALK+F M+
Sbjct: 160 DVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQ 219
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG---LELDVALGTALVEMYSKCG 251
+ E P+ T+ S+VSAC + + G H+Y + + DV + ++LV+MYSKCG
Sbjct: 220 NSFE-PDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCG 278
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAIL 310
+ A +VF M + +L SW MI LA +GRG A+ F+++++ P+S++F +L
Sbjct: 279 SLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVL 338
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
SAC+H G+V +G+ YFD M Y I+P +EHYGC+VD+L R+G I+EA ++ NM +P+
Sbjct: 339 SACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPD 398
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN-YVLAASVSSLSGNWDTAAELM 429
AVI RS L AC + L + + +L+ E + + YV+ + V + + W+ +
Sbjct: 399 AVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIR 458
Query: 430 VAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ G+ K PGCS ++++ S E + +T+
Sbjct: 459 KVMTDMGVTKEPGCSSIEIDGISHEFFAGDTS 490
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 236/390 (60%), Gaps = 6/390 (1%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ LI Y KT E+I LF L+ + P+ T+ ++ ACG+ + +G +H L+
Sbjct: 177 SWTGLISGYVKTGLFNEAISLF---LRMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLV 233
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
FK + + N +L MY C + A+ +F+EMP +D++SW+SMI G V C SP ++L
Sbjct: 234 FKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESL 293
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F +M+ + P+ V L S++SAC SL + G +H Y + ++ DV +GT LV+MY
Sbjct: 294 DLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMY 353
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG ++ A ++FN M KN+++W I GLA NG G A+ F ++++G +P+ ++F
Sbjct: 354 AKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFL 413
Query: 308 AILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
A+ +AC H GLVDEG+ YF+EM + +YN+ P +EHYGCMVD+L RAGL+ EA +I+ MP
Sbjct: 414 AVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMP 473
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+ IL + L + +G V + + L K L +E + YVL +++ + + W
Sbjct: 474 MPPDVQILGALLSSRNTYGNVGFTQEML-KSLPNVEFQDSGIYVLLSNLYATNKKWAEVR 532
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ + QKG++K PG S ++V DG + E
Sbjct: 533 SVRRLMKQKGISKAPGSSIIRV-DGMSHEF 561
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 195/376 (51%), Gaps = 11/376 (2%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRF--ILTSLSISLHFTRSLFNNLPVTPPL 66
LI + Q+H L ++L N ++++ L +H+ + +
Sbjct: 15 LIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSLSS 74
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F N LI YA +I ++ ++ G PD +T+P V+K+C + IG HS+
Sbjct: 75 FPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSV 134
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K GL D Y+ NTL+ +Y+ C + A VFE+M VRDVVSW+ +I+G+V ++A
Sbjct: 135 SVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEA 194
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--YAVVNGLELDVALGTALV 244
+ +F RM N PN T VS++ AC L + G+ IH + + G EL V A++
Sbjct: 195 ISLFLRM---NVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVC--NAVL 249
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY KC V A K+F+ M EK++ SWT MI GL ++ LF++M +G +PD +
Sbjct: 250 DMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGV 309
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+++LSAC+ LGL+D G+ + E + IK + +VDM + G I+ A I
Sbjct: 310 ILTSVLSACASLGLLDCGR-WVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNG 368
Query: 365 MPTEPNAVILRSFLGA 380
MP++ N +++G
Sbjct: 369 MPSK-NIRTWNAYIGG 383
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P + ++ ++I + ES+ LF +M +G PD V+ AC
Sbjct: 262 RKMFDEMP-EKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACAS 320
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L+ G VH I + D +IG TL+ MYA C ID+A+ +F MP +++ +W++
Sbjct: 321 LGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAY 380
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
I G +ALK F + + PN VT +++ +AC
Sbjct: 381 IGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTAC 419
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 228/383 (59%), Gaps = 1/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I+ YA+ + E++ LF M+ G+ + + + ACG + G VH L+
Sbjct: 395 SWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELL 454
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++GL+S+ + N L+ MY CK D+A VF+E+ + VSW++MI G S DA+
Sbjct: 455 VRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAV 514
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F RM+L N P+S TLVS++ A + + IH Y++ L+ DV + TAL++MY
Sbjct: 515 RLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMY 574
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V A +FN R++++ +W MI G +G G A+ LF +M +G P+ +F
Sbjct: 575 AKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFL 634
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++LSACSH GLVDEG+ YF M Y ++P MEHYG MVD+LGRAG + EA+ I+ MP
Sbjct: 635 SVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPM 694
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP + + LGAC+ H V L + + + +LEPE G +VL A++ + + W A
Sbjct: 695 EPGISVYGAMLGACKLHKNV-ELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVAR 753
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ A+ +KGL K PG S V++ +
Sbjct: 754 VRTAMEKKGLQKTPGWSIVQLKN 776
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 149/278 (53%), Gaps = 6/278 (2%)
Query: 61 PVTPPLFA----YNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCL 115
P+T A ++ +RA A S ++ F M +G P T+ ++K C
Sbjct: 180 PITAATHAAPDDHHARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARA 239
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +VH+ + GL + L MYA C+ A+ VF+ MP RD V+W++++A
Sbjct: 240 DLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVA 299
Query: 176 GFVACDSPSDALKVFHRMKLAN-ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+ A+ + RM+ + E P++VTLVS++ AC + A +H++AV G +
Sbjct: 300 GYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFD 359
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
V + TA++++Y KCG V+ A KVF+ M+++N SW MI G A+NG A++LF +M
Sbjct: 360 EQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRM 419
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+ G+ +S A L AC LG +DEG+ + + R+
Sbjct: 420 VGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACG 112
R +F+ +P + A+N L+ YA+ + ++ + M + G RPD T V+ AC
Sbjct: 280 RRVFDRMPARDRV-AWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+G VH+ + G D + +L +Y C +D A+ VF+ M R+ VSW++
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ ++AL +F RM V++++ + AC L + G +H V G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
LE +V + AL+ MY KC + A +VF+ + K SW MI G NG A+ LF+
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518
Query: 293 KMIQTGLKPDSISFSAILSA 312
+M +KPDS + +I+ A
Sbjct: 519 RMQLENVKPDSFTLVSIIPA 538
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H ++ LD + +++ I + + + RSLFN+ + +N +I Y
Sbjct: 551 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS-ARDRHVITWNAMIHGYGSHG 609
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS-VHSLIFKVGLDSDKYIG 139
+++LF+EM +G P+ T+ V+ AC L+ G S+ GL+
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHY 669
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
T++ + ++ A + ++MP+ +S + G A K+ ++LA ES
Sbjct: 670 GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLG---------ACKLHKNVELAEES 720
Query: 200 PNSV 203
+
Sbjct: 721 AQRI 724
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 266/482 (55%), Gaps = 40/482 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
S+ + ++ + + L +H + +L ++ +++ RF S + LH+ LF+
Sbjct: 241 SQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQ 300
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL---- 115
+ P F YNTLIR Y+K+S +S++LF++M + + PD FT+ F++K R
Sbjct: 301 IH-QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 359
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA--------------------------- 148
LI +H + K+G ++ N L+ +YAA
Sbjct: 360 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 419
Query: 149 ----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
E+++A+ VF+EMP RDVVSW+ M++G+ +AL++F M+ P+ V
Sbjct: 420 AHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 479
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+V ++SACTSL ++ G +H Y NG V+L AL++MY+KCG ++ A++VFN M
Sbjct: 480 MVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 539
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
K+L +W MIS A++G A +F M+ +G++PD ++F A+L+A +H G VD+G
Sbjct: 540 RKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYG 599
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
F+ M R Y ++ +EHYGCMVDMLGRAG +EEAY +I +M N V+ + L ACR +
Sbjct: 600 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 659
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G V + + + K L++L+P+ G Y+L + +G A EL A++ G K GCS
Sbjct: 660 GDV-EMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCS 718
Query: 445 WV 446
WV
Sbjct: 719 WV 720
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 202/481 (41%), Gaps = 108/481 (22%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
S+ + ++ + + L +H + +L ++ +++ RF S + LH+ LF+
Sbjct: 87 SQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQ 146
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL---- 115
+ P F YNTLIR Y+K+S +S++LF++M + + PD FT+ F++K R
Sbjct: 147 IH-QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 205
Query: 116 LIGIGGSVHSLIFKVGLDSDKY----------------IGNTLLRMYAACKEIDVAKAV- 158
LI +H G+D DKY +L M AC + K +
Sbjct: 206 LIVASDEIHG----AGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIH 261
Query: 159 ------------------------------------FEEMPVRDVVSWSSMIAGFVACDS 182
F ++ + ++++I G+ S
Sbjct: 262 ARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSS 321
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACT----SLINVRAGESIHSYAVVNGLELDVA 238
PS ++++F++M+ P+ T L+ + L + A + IH + G +
Sbjct: 322 PSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLF 381
Query: 239 LGTALVEMYS-------------------------------KCGHVEKAFKVFNLMREKN 267
+ AL+ +Y+ + G +E A +VF+ M E++
Sbjct: 382 VMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERD 441
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KN 324
+ SWT+M+SG A R A+ LF +M G++PD ++ ++SAC+ LG ++ G
Sbjct: 442 VVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHR 501
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
Y DE + + ++DM + G ++ A+ + NM + + + S + AC NH
Sbjct: 502 YIDENGFGWMVSLC----NALIDMYAKCGCMDLAWQVFNNMERK-SLITWNSMISACANH 556
Query: 385 G 385
G
Sbjct: 557 G 557
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 240/402 (59%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L + LF+ + P ++++ ++ YAK +F E+L++G D+++ P V+
Sbjct: 100 ALEDAQELFDGMSKRHP-YSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVI 158
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+AC + G +H + K GLD ++ TL+ MYA CK ++ A +F +M RD+
Sbjct: 159 RACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLA 218
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W+ MI P ++L F RM+ P+ V LV++V AC L + ++IH+Y
Sbjct: 219 TWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYI 278
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
G LDV LGTA+++MY+KCG VE A +F+ M+ +N+ +W+ MI+ +G+G A+
Sbjct: 279 NGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKAL 338
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF M+++G+ P+ I+F ++L ACSH GL++EG+ +F M Y + P ++HY CMVD+
Sbjct: 339 ELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDL 398
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG ++EA +I MP E + V+ + LGACR H L L + + + LLKL+ + +
Sbjct: 399 LGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRH-LDLAERVARSLLKLQSQKPGH 457
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + +G W+ A+ + + GL K+PG +W++V +
Sbjct: 458 YVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGE 499
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
+C +L VR +H+ NG ++A+ L+ MY + G +E A ++F+ M +++ S
Sbjct: 62 SCRNLFQVR---QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYS 118
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W++++ G A G +F +++++G D S ++ AC L + G+ +
Sbjct: 119 WSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR-----LI 173
Query: 331 RVYNIKPTME--HYGC--MVDMLGRAGLIEEAYHIIRNM 365
+K ++ H+ C +VDM R ++E+A+ I M
Sbjct: 174 HCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM 212
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 228/382 (59%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+Y ++I YA+ + E++KLF+EM + G+ PD +T V+ C R L+ G VH I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ + D ++ N L+ MYA C + A+ VF EM V+D++SW+++I G+ ++AL
Sbjct: 424 KENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEAL 483
Query: 188 KVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+F+ + + SP+ T+ ++ AC SL G IH Y + NG D + +LV+M
Sbjct: 484 SLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A +F+ + K+L SWT+MI+G +G G AI+LF +M Q G++PD ISF
Sbjct: 544 YAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISF 603
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++L ACSH GLVDEG +F+ M I+PT+EHY C+VDML R G + +AY I NMP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMP 663
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+A I + L CR H V L + + + + +LEPE YVL A++ + + W+
Sbjct: 664 IPPDATIWGALLCGCRIHHDV-KLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVK 722
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
L I Q+GL K PGCSW+++
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEI 744
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 212/452 (46%), Gaps = 45/452 (9%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTL 72
++V+ QLH LK+ + + + L + + R +F+ + + ++N++
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEM-TERDVISWNSI 267
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I Y + + + +F +ML +G+ D T V C LI +G +VH K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF 327
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ NTLL MY+ C ++D AK VF EM R VVS++SMIAG+ +A+K+F
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ SP+ T+ ++++ C + G+ +H + N + D+ + AL++MY+KCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGS 447
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA-KMIQTGLKPDSISFSAILS 311
+ +A VF+ MR K++ SW +I G + N N A+SLF +++ PD + + +L
Sbjct: 448 MREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLP 507
Query: 312 ACSHLGLVDEGKN---------YFDE------------------MARVYNIKPTMEH--- 341
AC+ L D+G+ YF + +AR+ T +
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVS 567
Query: 342 YGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD-----N 393
+ M+ G G +EA ++ +R EP+ + S L AC + G V D+ N
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLV---DEGWRFFN 624
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+ + K+EP + +Y + + +GN A
Sbjct: 625 IMRHECKIEPTV-EHYACIVDMLARTGNLSKA 655
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 2/310 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ + + LF +N L+ AK+ SI LF +M+ +G+ D++T+ V K+
Sbjct: 151 VFDQVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H I K G +GN+L+ Y +D A+ VF+EM RDV+SW+S+I
Sbjct: 210 SVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIIN 269
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V+ L VF +M + + T+VS+ + C + G ++H + V
Sbjct: 270 GYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSR 329
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ L++MYSKCG ++ A VF M +++ S+T MI+G A G A+ LF +M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G+ PD + +A+L+ C+ L+DEGK E + ++ + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARNRLLDEGKR-VHEWIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 356 EEAYHIIRNM 365
EA + M
Sbjct: 449 REAELVFSEM 458
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 11/300 (3%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT +R + ++ ++KL K + P T V++ C + G V + I
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G D +G+ L MY C ++ A VF+++ + + W+ ++ S ++ +
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M + +S T + + +SL +V GE +H Y + +G ++G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
V+ A KVF+ M E+++ SW +I+G NG +S+F +M+ +G++ D + ++
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKP--TMEHYGC--MVDMLGRAGLIEEAYHIIRNM 365
+ C+ L+ G+ + +K + E C ++DM + G ++ A + R M
Sbjct: 303 FAGCADSRLISLGR-----AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R LF+++ + L ++ +I Y E+I LF++M + G+ PD ++ ++
Sbjct: 549 ALLLARLLFDDI-TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL 607
Query: 109 KACGRCLLIGIGGSVHSLI---FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV- 164
AC L+ G +++ K+ + Y ++ M A + A E MP+
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA--CIVDMLARTGNLSKAYRFIENMPIP 665
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
D W +++ G ++ H +KLA V
Sbjct: 666 PDATIWGALLCG----------CRIHHDVKLAERVAEKV 694
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 260/448 (58%), Gaps = 12/448 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCII----SRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
HL Q+H + L+TSL N+ + SR L+ + ++++ +F+ + P L NT+I
Sbjct: 26 HLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQ-RLNPTLSHCNTMI 84
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDN-FTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
RA++ + E +LF + + P N + F +K C + + G +H IF G
Sbjct: 85 RAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGF 144
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
SD + TL+ +Y+ C+ A VF+E+P RD VSW+ +I+ ++ D L +F +
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDK 204
Query: 193 MKLANE---SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
MK + P++VT + + AC +L + G+ +H + NGL + L LV MYS+
Sbjct: 205 MKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR 264
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG ++KA++VFN MRE+N+ SWT MISGLA NG G AI F +M++ G+ P+ + + +
Sbjct: 265 CGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 310 LSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
LSACSH GLVDEG +FD M + + IKP + HYGC+VD+LGRA L+++AY +I++M +
Sbjct: 325 LSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMK 384
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P++ I R+ LGACR HG V L + + L++ + E +YVL + S G W+ EL
Sbjct: 385 PDSTIWRTLLGACRVHGNV-ELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTEL 443
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ +K + PGCS +++ G+ E
Sbjct: 444 RSLMKKKRIQTNPGCSAIELQ-GTVHEF 470
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 274/476 (57%), Gaps = 43/476 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVT 63
+++ K++ L Q+H +KT+L ++ +SR I L+ +S L + S+F+ +
Sbjct: 11 SVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ-H 69
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-----TGLRPDNFTYPFVVKACGRCLLIG 118
P F + LI+ ++ TS +ES+ L+ ML +G+ F+ P V+KACG+ L
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFD 126
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH + K L D ++GN+++RMY EI++A+ VF+ MP RDVVSW+SMIAG++
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 179 ACDSPSDALKVFHRMKLANE-------------------SPNSVTLVSLVSACTSLINVR 219
A ++F M + P+ +VS++SA L V
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVE 246
Query: 220 AGESIHSYAVVNGLELDVA-LGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISG 277
G+ +H+Y +N +EL +G+AL++MYSKCG++E A+ VF ++ +N+ W MISG
Sbjct: 247 EGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISG 306
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
LA +G A+ +F +M + ++P+ I+F +LS CSH GLV+EG+ YF+ M Y I P
Sbjct: 307 LAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVP 366
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK- 396
++HYGCM+D+ GRAG +E+A +I+NMP E + + ++ L A HG + +GK
Sbjct: 367 RIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHI-----EIGKS 421
Query: 397 ---LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++L P+ ++YVL +++ + +G WD A++ + + Q+G+ K+ GCS + VN
Sbjct: 422 AALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVN 477
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 237/407 (58%), Gaps = 2/407 (0%)
Query: 44 TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT 103
T S +L R +F+ + + + ++NTL+ A+ E++ L +M + G RPD+FT
Sbjct: 115 TGSSTALESVRKVFDEM-IERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFT 173
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
V+ C + G VH + G D+D ++G++L+ MYA C D + VF+ +P
Sbjct: 174 LSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLP 233
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
VRD + W+S++AG S +AL +F RM P VT SL+ C +L ++R G+
Sbjct: 234 VRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQ 293
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+Y + G E +V + ++L++MY KCG + A +F+ M ++ SWT MI G A +G
Sbjct: 294 LHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGP 353
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF +M KP+ I+F A+L+ACSH GLVD+G YF M+ Y I PT+EH
Sbjct: 354 AREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCA 413
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
+ D+LGRAG ++EAY+ I M +P A + + L ACR H + L + + K +++LEP
Sbjct: 414 ALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTM-LAEEVAKKIMELEP 472
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++V+ +++ S SG W+ AA L ++ +KG+ K P CSW++V +
Sbjct: 473 RSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKN 519
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 35/349 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNF--TYPFVVKACGRCLLIGIGG 121
PP ++ IR A ++I LF M + + P +K+C L +G
Sbjct: 12 PPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGA 71
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACK---------------------EIDVAKAVFE 160
S+H+L + G +D++ N LL +Y CK ++ + VF+
Sbjct: 72 SLHALAIRSGAFADRFTANALLNLY--CKLPCSYLHSTGVTSVGGTGSSTALESVRKVFD 129
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
EM RDVVSW++++ G +AL + +M P+S TL S++ +V+
Sbjct: 130 EMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKR 189
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H +AV NG + DV +G++L++MY+ C + + KVF+ + ++ W +++G A
Sbjct: 190 GSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQ 249
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG A+ +F +M+QTG++P ++FS+++ C +L + GK Y I+ E
Sbjct: 250 NGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQL-----HAYVIRGGFE 304
Query: 341 H----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++DM + G I A+HI M P+ V + + HG
Sbjct: 305 DNVFISSSLIDMYCKCGEISIAHHIFDRM-CSPDVVSWTAMIMGYALHG 352
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/455 (34%), Positives = 256/455 (56%), Gaps = 27/455 (5%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFIL------TSLSISLHFTRSLFNNLPVTPPLFA 68
T+ L QLH +K+ L + ++R + + L + R +F+ +P +
Sbjct: 43 TLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVW 102
Query: 69 YNTLIRAYAKTSCS-------IESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
YNTL+R YA+ S + E+ ++F ML+ G+ PD +T+ ++KAC G
Sbjct: 103 YNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGR 162
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
H + KVG +Y+ TL+ MYA C + A+ +F + VVS+++MI V
Sbjct: 163 QAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSS 222
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--VAL 239
P +AL +F M+ SVTL+S++SAC L + G IH Y V ++LD V +
Sbjct: 223 RPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEY--VRKVQLDSLVKV 280
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
TAL++MY KCG +E A VF M ++ Q+W++MI A++ G AISLF +M + G+
Sbjct: 281 NTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGI 340
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KPD ++F +L ACSH GLV EG YFD M R + + P ++HYGC+ D+L R+G ++ AY
Sbjct: 341 KPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAY 399
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASV 415
I +P +P A++ R+ L AC + G D +LGK +L+L+ G +YV+ +++
Sbjct: 400 EFIDELPIKPTAILWRTLLSACGSRG-----DADLGKQVFERILELDDSHGGDYVIFSNL 454
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ +G W+ + +N+KG+ KVPGCS ++V++
Sbjct: 455 CANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDN 489
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 267/472 (56%), Gaps = 40/472 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFIL--TSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
T++H HQ++ +KT L N +R + S S ++++ LF +P P L+++NT+
Sbjct: 40 TINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMP-NPNLYSWNTI 98
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA++++S +I LF +ML + ++P TYP V KA + G +H + K+GL
Sbjct: 99 IRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGL 158
Query: 133 DSDKYIGNTLLRMYA-----------------------------------ACKEIDVAKA 157
+D++I NT++ MYA C EID ++
Sbjct: 159 QNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRN 218
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F++M R VSW+SMI+G+V +AL++F++M++ + T+VSL++AC L
Sbjct: 219 LFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGA 278
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G+ +H Y N EL+V + TA+++MY KCG VE A +VF + L W +I G
Sbjct: 279 LQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIG 338
Query: 278 LADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
LA NG A F+K+ + LKPDS+SF +L+AC HLG +++ ++YF+ M Y I+
Sbjct: 339 LAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIE 398
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P+++HY C+VD+LG+AGL+EEA +I+ MP +P+A+I S L +CR H V + +
Sbjct: 399 PSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNV-QIARRAAQ 457
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ +L P + YVL ++V + S ++ A E + + + K PGCS +++
Sbjct: 458 RVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIEL 509
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKV 259
N L L + CT++ + I+ + + GL L+ +A AL S G++ A+K+
Sbjct: 27 NHPCLTMLQNHCTTINHFH---QIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKL 83
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M NL SW +I + + +AISLF M+ + ++P +++ ++ A + LG
Sbjct: 84 FVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHA 143
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHII 362
G RV + + + C ++ M GL+ EA +
Sbjct: 144 HYGAQLH---GRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVF 185
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 260/454 (57%), Gaps = 28/454 (6%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSL--FNNLP 61
+L++L K++H +K +D + T ++S + FT +L FN +
Sbjct: 444 SLLKLGKSIH------CFTVKADMDSDLSTGTALVSMYAKCGF-----FTAALTTFNRMS 492
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ + +N+LI YA+ +I +F ++ + + PD T VV AC + G
Sbjct: 493 -SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVAC 180
+H LI K+G +SD ++ N L+ MYA C + A+ +F + +D V+W+ +IA ++
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+A+ FH+M+L N PNSVT VS++ A L R G + H+ + G + +G
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
+L++MY+KCG + + K+FN M K+ SW M+SG A +G G+ AI+LF+ M ++ ++
Sbjct: 672 NSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
DS+SF ++LSAC H GLV+EG+ F M+ Y+IKP +EHY CMVD+LGRAGL +E
Sbjct: 732 IDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVS 416
I+ MP EP+A + + LG+CR H V LG++ L+KLEP A++V+ +S+
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNV-----KLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ SG W A + +N GL K PGCSWV++ +
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTP 64
H L+ K ++ L Q+H + + H+ I L SL RS+F++ P P
Sbjct: 34 HYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTP-NP 92
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+N++IRAY ++ E+++++ M++ GL PD +T+ FV+KAC L + G H
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFH 152
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
I + GL+ D +IG L+ MY+ ++ A+ VF++MP RDVV+W++MIAG + P
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC 212
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ F M+L P+SV+L++L L N+ SIH Y V + A+ L+
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGY--VFRRDFSSAVSNGLI 270
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
++YSKCG V+ A +VF+ M +++ SW M++G A NG + LF KM ++ + +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 305 S-FSAILSACSHLGLVDEGK 323
S SA L+A + L ++GK
Sbjct: 331 SAVSAFLAAAETIDL-EKGK 349
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 146/269 (54%), Gaps = 1/269 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + V ++ T++ YA C +E ++LFD+M +R + + A
Sbjct: 283 RRVFDQM-VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + +DSD + L+ MYA C E + AK +F + RD+V+WS++
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA V P +AL +F M+ PN VTL+S++ AC L ++ G+SIH + V +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM 461
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D++ GTALV MY+KCG A FN M +++ +W +I+G A G AI +F K
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEG 322
+ + + PD+ + ++ AC+ L +D+G
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQG 550
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 1/258 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L A++ +I A +T E++ LF EM ++P+ T ++ AC L+ +G S+H
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K +DSD G L+ MYA C A F M RD+V+W+S+I G+ P +
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ +F++++L+ +P++ T+V +V AC L ++ G IH V G E D + AL++
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALID 574
Query: 246 MYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + A +FN K+ +W ++I+ NG AIS F +M P+S+
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Query: 305 SFSAILSACSHLGLVDEG 322
+F ++L A ++L EG
Sbjct: 635 TFVSVLPAAAYLAAFREG 652
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 152/279 (54%), Gaps = 11/279 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT----YP 105
L R +F+ +P + A+N +I +++ E++ F M G+ P + + +P
Sbjct: 180 LKRAREVFDKMP-KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+ K I + S+H +F+ D + N L+ +Y+ C ++DVA+ VF++M +
Sbjct: 239 GICKLSN----IELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSW +M+AG+ + L++F +MKL N N V+ VS A I++ G+ IH
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
A+ ++ D+ + T L+ MY+KCG EKA ++F ++ ++L +W+ +I+ L G
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
A+SLF +M +KP+ ++ +IL AC+ L L+ GK+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH+ +V+G + ++ T L+ +YS + A VF+ + W MI +
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ N A+ ++ M++ GL+PD +F+ +L AC+ + EG + E+ R +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMP 366
G +VDM + G ++ A + MP
Sbjct: 169 G-LVDMYSKMGDLKRAREVFDKMP 191
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 247/436 (56%), Gaps = 9/436 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L D + + ++ I + S S+ + R +F+ ++ +N L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR-KRTIYVWNALFRALTLA 156
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--GRCLL--IGIGGSVHSLIFKVGLDSD 135
E + L+ +M + G+ D FTY +V+KAC C + + G +H+ + + G S
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-- 193
YI TL+ MYA +D A VF MPVR+VVSWS+MIA + +AL+ F M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ + SPNSVT+VS++ AC SL + G+ IH Y + GL+ + + +ALV MY +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
E +VF+ M ++++ SW +IS +G G AI +F +M+ G P ++F ++L AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GLV+EGK F+ M R + IKP +EHY CMVD+LGRA ++EA ++++M TEP +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
S LG+CR HG V L + + L LEP+ NYVL A + + + WD + +
Sbjct: 457 WGSLLGSCRIHGNV-ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 434 QKGLNKVPGCSWVKVN 449
+GL K+PG W++V
Sbjct: 516 HRGLQKLPGRCWMEVR 531
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N LI++ K ++I++ + P TY ++ CG + VH I
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G D D ++ L+ MY+ +D A+ VF++ R + W+++ + L +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 190 FHRMKLANESPNSVTLVSLVSACT----SLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ +M + T ++ AC ++ ++ G+ IH++ G V + T LV+
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ--TGLKPDS 303
MY++ G V+ A VF M +N+ SW+ MI+ A NG+ A+ F +M++ P+S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMAR--VYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
++ ++L AC+ L +++GK + R + +I P + +V M GR G +E +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVGQRV 342
Query: 362 IRNM 365
M
Sbjct: 343 FDRM 346
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LK R+ SP+ T L+ C ++ +H + + NG + D L T L+ M
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YS G V+ A KVF+ R++ + W + L G G + L+ KM + G++ D ++
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 307 SAILSAC-------SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM---VDMLGRAGLIE 356
+ +L AC +HL +GK + R + H M VDM R G ++
Sbjct: 182 TYVLKACVASECTVNHLM---KGKEIHAHLTR----RGYSSHVYIMTTLVDMYARFGCVD 234
Query: 357 EAYHIIRNMP 366
A ++ MP
Sbjct: 235 YASYVFGGMP 244
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 265/492 (53%), Gaps = 39/492 (7%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLH-FTRSLFN 58
+ I T + K + + Q+H L LD + ++++ I LT L+I + + S+FN
Sbjct: 45 LESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFN 104
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+ P F YN LIR Y ES + + M K G+ P +FT+ + KACG + +G
Sbjct: 105 QVNYPNP-FLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 119 IGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS----- 172
+G +H VG D ++GN+++ MY C ++ + VF+EMP RDV+SW+
Sbjct: 164 LGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAY 223
Query: 173 --------------------------MIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
M++GF P +A+ F +M+ + +TL+
Sbjct: 224 VKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLI 283
Query: 207 SLVSACTSLINVRAGESIHSYAVVN--GLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
++SAC L + + I A + G + V +G+AL++MYSKCG V A++VF M+
Sbjct: 284 GVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMK 343
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
E+N+ S++ MI G A +GR + A+ LF +M++T +KP+ ++F +L+ACSH G+V++G
Sbjct: 344 ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQ 403
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
F+ M + Y IKP+ +HY CMVD+LGRAG ++EA+ +++ MP EP+ + + LGACR H
Sbjct: 404 IFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIH 463
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ + L +LEP NY+L A++ + G W+ + + + +GL K P S
Sbjct: 464 -KSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFS 522
Query: 445 WVKVNDGSAEEM 456
W++ G E
Sbjct: 523 WIESEKGMVHEF 534
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 267/487 (54%), Gaps = 48/487 (9%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTP 64
I TL++ T L Q+H ++ L + IIS+F+ S+S +T S+FN + +P
Sbjct: 76 ISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVS-SP 134
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+NT I+ Y++ ++ LF M ++ PD FTYP ++KAC + + G + H
Sbjct: 135 STVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFH 194
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF------- 177
+ G+ D ++ +L+ +Y C EI A+ VF+EM R+VVSW++MIAG+
Sbjct: 195 GSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLV 254
Query: 178 ------------------------VACDSPSDALKVFHRMKLANES-------------P 200
V C A K+F M N P
Sbjct: 255 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKP 314
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA-LGTALVEMYSKCGHVEKAFKV 259
+ +VSL+SAC+ + ++ + + Y + +++ A + AL++M +KCG +++A K+
Sbjct: 315 DEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKL 374
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M +++L S+ M+ GL+ +G G A+SLF++M+ GL PD ++F+ IL+ACS GLV
Sbjct: 375 FEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLV 434
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG YF+ M Y+I P+ +HY CMVD+LGRAG ++EAY ++++MP EP+A + LG
Sbjct: 435 DEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLG 494
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + L + + L +LEP+ NYVL +++ + + W + L + ++G+ K
Sbjct: 495 ACKLHCDI-ELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRK 553
Query: 440 VPGCSWV 446
+PGCSW+
Sbjct: 554 IPGCSWI 560
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 265/446 (59%), Gaps = 8/446 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLP-VTPPLFAYNTL 72
+H ++H+ LK + H + ++++ S ++ R++F+ LP + + ++N++
Sbjct: 143 LHKGREIHSSTLKLGV-HLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSM 201
Query: 73 IRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
I Y ++ ++K+F E+L G L PD T + CGR L+ +G +H L G
Sbjct: 202 ISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSG 261
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
D ++G++L+ MY+ C +I+ A+ VF+ +P R+ V W+SMIAG+ D +A+++F
Sbjct: 262 FVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFR 321
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M++ + ++ T+ ++SAC + G IH Y N +E+D+ AL+ MYSKCG
Sbjct: 322 EMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCG 381
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAIL 310
++KA ++F+ + + ++ SW+ +ISGLA NG + A+ LF++M + + ++P+ I+F +L
Sbjct: 382 DIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVL 441
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
AC+H G VD+G YF+ M ++YN+ P +EHYGCMVD+LGRA L+ EA IR +P +P+
Sbjct: 442 CACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPD 501
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
VI RS L ACRNHG + L + K + +LEP VL ++V + + W +
Sbjct: 502 VVIWRSLLFACRNHGNI-ELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRK 560
Query: 431 AINQKGLNKVPGCSWVKVNDGSAEEM 456
+ + + K PGCS+V++ DG E+
Sbjct: 561 DMATQRIKKQPGCSFVEI-DGLVHEL 585
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 192/322 (59%), Gaps = 6/322 (1%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
F+R+LF + P +F++N + RAY+++S E+I L++ ML+ G PDN+++PFV+KAC
Sbjct: 79 FSRTLFFQIH-KPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKAC 137
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP--VRDVVS 169
R L+ G +HS K+G+ D ++ N L+ +++C ++ A+AVF+ +P VRDVVS
Sbjct: 138 ARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVS 197
Query: 170 WSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+SMI+G++ ALKVF + + SP+ VTLVS +S C L + G+ IH
Sbjct: 198 WNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLF 257
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+G LDV +G++L++MYSKCG +E A KVF+ + +N WT MI+G A + AI
Sbjct: 258 TGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAI 317
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M G D+ + + +LSAC H G + +G+ + +I+ + ++ M
Sbjct: 318 ELFREMQIGGFAADAATIACVLSACGHWGALAQGR-WIHLYCERNSIEMDLNARNALIGM 376
Query: 349 LGRAGLIEEAYHIIRNMPTEPN 370
+ G I++A I + T+P+
Sbjct: 377 YSKCGDIQKALEIFHGL-TQPD 397
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 241/414 (58%), Gaps = 6/414 (1%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT 95
C+I+ + S S + R LF+++P ++N++I YA E++ LFD+ML+
Sbjct: 245 CLITGY---SKSGDVEEARRLFDSMPRRTSA-SWNSMIACYAHGGEFREALTLFDQMLRE 300
Query: 96 GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
G P+ T V C + + G + I + L + + L+ MY C+ ID A
Sbjct: 301 GASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEA 359
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
+ F+ MP RDVV+WS+MIAG+ P ++L++F RMK N PN VTLV ++SAC L
Sbjct: 360 RHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 419
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ GE I +Y L L LG+AL++MY+KCGHV +A VFN M +K + +W MI
Sbjct: 420 GSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMI 479
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
GLA NG AI+L+ KM+ G++P+ ++F A+L+AC+H GLVD+G +F+EM + ++
Sbjct: 480 RGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHV 539
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
P +EH C+VD+L ++G + EAY I +M EPNAVI + L ACR H V G
Sbjct: 540 SPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAG 599
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
K L+ LEP + YVL +++ + +G W E+ + K L K+ SW++++
Sbjct: 600 K-LVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 652
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 172/398 (43%), Gaps = 66/398 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +P P + +K S E I++ + + G + P V+K+C +
Sbjct: 128 RHLFDVVP-RPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----- 168
G H G+ D ++ L+ YA ++D A F+EMPV+D +
Sbjct: 187 SAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCL 246
Query: 169 --------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
SW+SMIA + +AL +F +M SPN+
Sbjct: 247 ITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T+ ++ S C ++ G ++ L+ +V + TAL+EMY KC +++A F+
Sbjct: 307 ITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFDR 365
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +++ +W+ MI+G + NGR + ++ LF +M T KP+ ++ +LSAC+ LG + G
Sbjct: 366 MPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 425
Query: 323 K---NYFD----------------------EMARVYNIKPTMEH-----YGCMVDMLGRA 352
+ NY + +AR ++ ME + M+ L
Sbjct: 426 EQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALN 485
Query: 353 GLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHGQV 387
G E+A + R M +PN V + L AC + G V
Sbjct: 486 GFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLV 523
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 240/397 (60%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F +P + +YNT+I YA++ +++++ EM T L+PD+FT V+
Sbjct: 196 RRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + + G+DSD YIG++L+ MYA I+ ++ VF + RD +SW+S+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+AG+V ++AL++F +M A P +V S++ AC L + G+ +H Y + G
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++ + +ALV+MYSKCG+++ A K+F+ M + SWT +I G A +G G+ A+SLF +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G+KP+ ++F A+L+ACSH+GLVDE YF+ M +VY + +EHY + D+LGRAG
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEAY+ I M EP + + L +C H + L L + + + + ++ E YVL
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVH-KNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + +G W A+L + + +KGL K P CSW+++ +
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 43/400 (10%)
Query: 6 IETLIQLS---KTVHHLHQLHTLFLKT-SLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
I+TLI+ K+ QLH F++T SL H + I I T+L + LF L
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHE-ALLLFKTLK 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+PP+ A+ ++IR + S +++ F EM +G PD+ +P V+K+C + + G
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYA---------------------------------A 148
SVH I ++G+D D Y GN L+ MYA
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 149 CK---EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
C ID + VFE MP +DVVS++++IAG+ DAL++ M + P+S TL
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
S++ + ++V G+ IH Y + G++ DV +G++LV+MY+K +E + +VF+ +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
++ SW +++G NGR N A+ LF +M+ +KP +++FS+++ AC+HL + GK
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ R + +VDM + G I+ A I M
Sbjct: 366 HGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 271/510 (53%), Gaps = 69/510 (13%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSL 56
++S +L++ K++ L Q+ + + T L + SR I ++ + T L
Sbjct: 48 VLSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNIL 107
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCL 115
FN P F++N IR + + E++ L+ +L+ G +PDN+TYP + KAC R
Sbjct: 108 FNTR--NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLS 165
Query: 116 LIGIGGSVHSLIFKVGLDS-------------------------DK-------------- 136
LI +G + + +G DS DK
Sbjct: 166 LIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMIN 225
Query: 137 -YIGN--------------------TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
Y GN T++ YA +D+A +F+EMP +DVV W++MI
Sbjct: 226 GYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIG 285
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V + +AL +F+ M+ N +P+ VT+VS +SAC+ L + G IH Y + L L
Sbjct: 286 GYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSL 345
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+VALGTAL++MY+KCG + KA +VF + +N +WT +ISGLA +G + AI+ F++MI
Sbjct: 346 NVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMI 405
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ PD ++F +LSAC H GLV+EG+ YF +M+ +N+ P ++HY CMVD+LGRAGL+
Sbjct: 406 DNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLL 465
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
EEA +I++MP E +AV+ + ACR HG VL + + LL+++P YVL A++
Sbjct: 466 EEAEELIKSMPIEADAVVWGALFFACRIHGNVL-MGERAASKLLQMDPHDSGIYVLLANM 524
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
+ W A + + Q+G+ K P SW
Sbjct: 525 YGEAEMWKEAGKARKLMRQRGVEKTPD-SW 553
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 259/446 (58%), Gaps = 5/446 (1%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E L S L ++H + ++T ++++ + + + + + R +F+ +P P
Sbjct: 15 ELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMP-KPR 73
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +NTL + Y + ES+ L+ +M G+RPD FTYPFVVKA + ++ G S+H+
Sbjct: 74 IFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHA 133
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G + + L+ MY E+ A+ +FE M V+D+V+W++ IA V + +
Sbjct: 134 HVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAI 193
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+ F++M +S T+VS++SAC L ++ GE I+ A +E ++ + A ++
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLD 253
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+ KCG E A +F+ M+++N+ SW+ MI G A NG A++LF M GL+P+ ++
Sbjct: 254 MHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVT 313
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARV--YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
F +LSACSH GLV+EGK YF M R+ N++P EHY CMVD+LGR+GL+EEAY I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
M EP+ I + LGAC H ++ L + +L++ P++G+ +VL +++ + +G WD
Sbjct: 374 KMRVEPDTGIWGALLGACAVHRDMI-LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
++ + + G KV S V+ +
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVEFD 458
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 237/397 (59%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F +P + +YNT+I YA++ +++++ EM + L+PD FT V+
Sbjct: 160 RKVFELMP-RKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSE 218
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + + G+DSD YIG++L+ MYA I+ ++ VF + RD +SW+S+
Sbjct: 219 YVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSL 278
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+AG+V ++AL++F +M A P +V S++ AC L + G+ +H Y + G
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++ + +ALV+MYSKCG+++ A K+F+ M + SWT +I G A +G G+ A+SLF +
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G+KP+ ++F A+L+ACSH+GLVDE YF+ M +VY + +EHY + D+LGRAG
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEAY I M EP + + L +C H L L + + + + ++ E YVL
Sbjct: 459 KLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKN-LELAEKVAEKIFTIDSENMGAYVLMC 517
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + +G W A+L + + +KGL K P CSW+++ +
Sbjct: 518 NMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKN 554
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 203/364 (55%), Gaps = 7/364 (1%)
Query: 6 IETLIQ---LSKTVHHLHQLHTLFLKT-SLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
I+TLI+ K+ QLH F++T SL H + I I T+L + LH +F L
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKL-LHEALLVFKTLE 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+PP+ A+ ++IR + S ++ F EM +G PD+ +P V+K+C + + G
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
SVH I ++G+D D Y GN L+ MY+ ID + VFE MP +DVVS++++IAG+
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG 185
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
DAL++ M ++ P++ TL S++ + ++V G+ IH Y + G++ DV +G+
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGS 245
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MY+K +E + +VF+ + ++ SW +++G NGR N A+ LF +M+ ++P
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+++FS+++ AC+HL + GK + R + +VDM + G I+ A I
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGRNIFIASALVDMYSKCGNIQAARKI 364
Query: 362 IRNM 365
M
Sbjct: 365 FDRM 368
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 255/430 (59%), Gaps = 5/430 (1%)
Query: 23 HTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K L+ H+ + S + S R +FN +P + + ++N +++AY +
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIP-SRDVVSWNAMMKAYGRVGM 209
Query: 82 SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E ++ +M+K G + P+ T V+ AC + +G V G+++D +G+
Sbjct: 210 NGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGS 269
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C EI A+ VF+ + +DVV+W++MI G+ ++A+ +FH MK A P
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCP 329
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TL ++SAC+++ + G + YA GL +V +GTALV+MY+KCG ++KA +VF
Sbjct: 330 DKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVF 389
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLV 319
MR KN+ SW +I GLA NG+G+ AI F M + GLKPD I+F +LSAC H GLV
Sbjct: 390 RKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLV 449
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+GK +F+ + + I P +EHY CMVD+L R+G +EE + I +P + +AV+L + L
Sbjct: 450 KDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLA 509
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR V + + + +++LEP NYV+++ + + SG D +A++ + ++G+NK
Sbjct: 510 ACRKCKNV-EIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGPMRERGVNK 568
Query: 440 VPGCSWVKVN 449
PGCSWV+++
Sbjct: 569 TPGCSWVEIS 578
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 245/466 (52%), Gaps = 38/466 (8%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
HQ+H L L + S+ + + S + + S+FN + P +N++IRAYA+
Sbjct: 90 HQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG-EPSSLLFNSMIRAYAR 148
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ ++ + M G D FT+PFV+K+ L + +G VH LI ++GL D Y+
Sbjct: 149 YGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 208
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK---- 194
+L+ +Y C EI+ A VF+ M +RDV SW++++AG+ AL +F RM
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 268
Query: 195 --------------LANES---------------PNSVTLVSLVSACTSLINVRAGESIH 225
LA ++ PN VT++S++ AC L + G IH
Sbjct: 269 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGR 283
A GL + ++ AL MY+KCG + A F+ + EKNL +W MI+ A G
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
G A+S F +MIQ G++PD I+F+ +LS CSH GLVD G YF+ M+ Y+I P +EHY
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
C+ D+LGRAG + EA ++ MP I S L ACR H + L + + + L LEP
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH-RNLEMAETAARKLFVLEP 507
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
E NYVL +++ + +G W +L + +G K PGCSW+++N
Sbjct: 508 ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEIN 553
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 33/250 (13%)
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
++ +G VH+ + GL +G+ ++ YA+ +ID + +VF + + ++SMI
Sbjct: 85 MLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ + + M + + T ++ + L++V G+ +H + GL+
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFN-------------------------------LMR 264
D+ + T+L+ +Y KCG + A KVF+ M
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQ--TGLKPDSISFSAILSACSHLGLVDEG 322
+N+ SWT MISG + +G A+SLF +M++ +G++P+ ++ ++L AC+ L ++ G
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324
Query: 323 KNYFDEMARV 332
+ + R+
Sbjct: 325 RQIHELACRM 334
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A P ++ + T L ++ G +H++ ++ GL+ +G+ +V Y+ G ++
Sbjct: 64 APGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDS 123
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+ VFN + E + + MI A G ++ + M G D +F +L +
Sbjct: 124 SVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVE 183
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
L V GK + R+ ++ + ++ + G+ G I +A + NM
Sbjct: 184 LLSVWMGKCVHGLILRI-GLQFDLYVATSLIILYGKCGEINDAGKVFDNM 232
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 262/480 (54%), Gaps = 41/480 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS--------LHFTRSLFNNL 60
L+Q + L +H L+T L + + SR + + S L + +F+ +
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P LF +N LIR ++ + ++ + +MLK+ + PDN T+PF++KA + +G
Sbjct: 78 Q-NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
HS I + G +D Y+ N+L+ MYA C I A +F +M RDVVSW+SM+AG+ C
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 181 DSPSDALKVF----HR---------------------------MKLANESPNSVTLVSLV 209
+A ++F HR MK N +VS++
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S+C L + GE + Y V + + +++ LGTALV+M+ +CG +EKA VF + E +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW+ +I GLA +G + A+ F++MI G P ++F+A+LSACSH GLV++G ++ M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
+ + I+P +EHYGC+VDMLGRAG + EA + I M +PNA IL + LGAC+ +
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT-E 435
Query: 390 LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + +G +L+K++PE YVL +++ + +G WD L + +K + K PG S ++++
Sbjct: 436 VAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 271/494 (54%), Gaps = 56/494 (11%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCI---ISRFILTS--LSISLHFTRSLFNNLPVTP 64
I +T+ L Q+H +F+K+ +T I RF TS L + +FN +P
Sbjct: 23 INTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP-QR 81
Query: 65 PLFAYNTLIRAYAKTS--CSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGG 121
F++NT+IR ++++ ++ +I LF EM+ + P+ FT+P V+KAC + I G
Sbjct: 82 NCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGK 141
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------------------- 150
+H L K G D+++ + L+RMY C
Sbjct: 142 QIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEV 201
Query: 151 --------------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ A+ +F++M R VVSW++MI+G+ DA++VF MK
Sbjct: 202 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKG 261
Query: 197 NE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ PN VTLVS++ A + L ++ GE +H YA +G+ +D LG+AL++MYSKCG +EK
Sbjct: 262 EDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 321
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A VF + +N+ +W+ MI+G A +G+ AI F KM Q G++P +++ +L+ACSH
Sbjct: 322 AIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 381
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
GLV+EG+ YF +M V ++P +EHYGCMVD+LGR GL++EA I NMP +P+ VI +
Sbjct: 382 AGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWK 441
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR H V + + +L+ + P YV +++ + GNW +E+ + + +
Sbjct: 442 ALLGACRMHRNV-EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEM 500
Query: 436 GLNKVPGCSWVKVN 449
+ K PGCSW+ ++
Sbjct: 501 DIRKDPGCSWIDID 514
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 237/402 (58%), Gaps = 5/402 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + + ++ L+ A+ + +E++ + EM T P+ T V+ ACG
Sbjct: 172 ARKVFDEM-AERDVVSWTALLSAFTRGGMFMEALGVLAEMDVT---PNEVTLASVLVACG 227
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G +VH F+ + + +GN LL MY C+++D+A+ VF+ + RD+VSW+
Sbjct: 228 NLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTV 287
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+G V C PS+AL+VF+ M+++ P+ V L +++SAC SL + +G +H Y G
Sbjct: 288 MISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKG 347
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E DV +GT++V+MY KCG ++ A +F M KN+ SW +I+G A +GRG A+ F
Sbjct: 348 IEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFD 407
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M+ +GL P+ ++F +L AC H GLV EG+ F+ M + Y + P +HYGCMVD+LGRA
Sbjct: 408 RMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRA 467
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GLI+EAY +I+ MP P + L AC+ HG++ + L + +LE YVL
Sbjct: 468 GLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMH-IHELESSGNGIYVLL 526
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+++ ++S W + +N+KG+ K PG S ++VN + E
Sbjct: 527 SNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCE 568
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 165/305 (54%), Gaps = 12/305 (3%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML-----KTGLRPDNFTYPFVVKACGRCLLIGI--GG 121
+N LI + + + F +L G RPD +T P +KAC R L G+ G
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACAR-LGGGLREGC 138
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
H++ K G + N L+ Y AC + A+ VF+EM RDVVSW+++++ F
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGG 198
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL V M + +PN VTL S++ AC +L RAG+++H + EL++ +G
Sbjct: 199 MFMEALGVLAEMDV---TPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGN 255
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++MY KC ++ A +VF+++ +++ SWT+MISGL R + A+ +F M +G+KP
Sbjct: 256 ALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKP 315
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D + S +LSAC+ LG ++ G+ + E I+ + +VDM + G ++ A I
Sbjct: 316 DKVVLSTVLSACASLGALESGR-WVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSI 374
Query: 362 IRNMP 366
+ MP
Sbjct: 375 FQEMP 379
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ L + + ++ +I + E++++F+ M +G++PD V+
Sbjct: 267 LDLARRVFDML-LARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLS 325
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + G VH I + G++ D ++G +++ MY C +D A ++F+EMP+++V S
Sbjct: 326 ACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSS 385
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI----- 224
W+++I GF +AL F RM + PN VT ++++ AC V+ G +
Sbjct: 386 WNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMT 445
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNGR 283
SY + + G +V++ + G +++A+ V M + + +W ++S +GR
Sbjct: 446 KSYKLS---PWEDHYGC-MVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGR 501
Query: 284 GNYA 287
+++
Sbjct: 502 MDFS 505
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 242/432 (56%), Gaps = 37/432 (8%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L ++ +LF P +F + +I +A +++ + +ML G+ P+ FT+ ++K
Sbjct: 25 LDYSVALFGRTQ-NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK 83
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA---------------------- 147
C I G ++HS K+G DSD Y+ LL +YA
Sbjct: 84 LCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVS 139
Query: 148 -----AC----KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
C E+D A+ +F+ M RD V W+ MI G+ P++AL +F RM A
Sbjct: 140 LTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA 199
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN VT++S++SAC L + +G +HSY NG++ +V +GTALV+MYSKCG +E A
Sbjct: 200 KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARL 259
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ + +K++ +W MI G A G A+ LF M + GL P +I+F ILSAC H G
Sbjct: 260 VFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGW 319
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V EG + F++M Y I+P +EHYGCMV++LGRAG +E+AY +++NM EP+ V+ + L
Sbjct: 320 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 379
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
GACR HG++ L + + +LL+ Y+L +++ + GNWD A L + G+
Sbjct: 380 GACRLHGKIA-LGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438
Query: 439 KVPGCSWVKVND 450
K PGCS ++VN+
Sbjct: 439 KEPGCSSIEVNN 450
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 44/254 (17%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L R YA+ +D + A+F V W+++I G AL + +M
Sbjct: 13 DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN+ T S++ C + G+++HS AV G + D+ + T L+++Y++ G V A ++
Sbjct: 73 PNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQL 128
Query: 260 FNLMREKNLQS-------------------------------WTIMISGLADNGRGNYAI 288
F+ M EK+L S W +MI G NG N A+
Sbjct: 129 FDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEAL 188
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYG-C 344
LF +M++ KP+ ++ ++LSAC LG ++ G+ +Y + +N+ H G
Sbjct: 189 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV-----HVGTA 243
Query: 345 MVDMLGRAGLIEEA 358
+VDM + G +E+A
Sbjct: 244 LVDMYSKCGSLEDA 257
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L Y+ G ++ + +F + ++ WT +I G A G A++ +A+M+ G++P+
Sbjct: 15 LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPN 74
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ +FS+IL C ++ GK + ++ G ++D+ R G + A +
Sbjct: 75 AFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTG-LLDVYARGGDVVSAQQLF 129
Query: 363 RNMPTEPNAVILRSFLGACRNHGQV 387
MP E + V L + L HG++
Sbjct: 130 DTMP-EKSLVSLTAMLTCYAKHGEL 153
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 265/461 (57%), Gaps = 12/461 (2%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNL 60
H+ +LI S HL Q+H L L+TSL N+ + +SR L+ + ++++ +F+
Sbjct: 13 HLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQ- 71
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN-FTYPFVVKACGRCLLIGI 119
+ P L NT+IRA++ + E +LF + + P N + F +K C + +
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG 131
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H IF G SD + TL+ +Y+ C+ A VF+E+P RD VSW+ + + ++
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 180 CDSPSDALKVFHRMKLANE---SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
D L +F +MK + P+ VT + + AC +L + G+ +H + NGL
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ L LV MYS+CG ++KA++VF MRE+N+ SWT +ISGLA NG G AI F +M++
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLI 355
G+ P+ + + +LSACSH GLV EG +FD M + + IKP + HYGC+VD+LGRA L+
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
++AY +I++M +P++ I R+ LGACR HG V L + + L++L+ E +YVL +
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV-ELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
S G W+ EL + +K ++ PGCS +++ G+ E
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ-GTVHEF 470
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 224/388 (57%), Gaps = 32/388 (8%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M+ G++P+ FT VVKAC + G H+ I K+G +SD + L+ MYA C
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 152 IDVAKAVFE-------------------------------EMPVRDVVSWSSMIAGFVAC 180
++ A VF+ EM RDVVSW+++IAG+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
++L VF++M+ + + S++SAC L + G H+Y V +G LD+ +G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
+ALV+MY+K G +E A +VF+ M ++N SW +I+G A +GRGN A+ LF +M+Q G+K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ ISF +LSACSH GLV+EG+ YF+ M + Y I P + HY CM+D+LGRAG ++EA +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
I MP EP+ + + LGACR HG L + + LL +E ++ YVL +++ + +G
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNT-ELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKV 448
WD AA++ + +G+ K PG SW++V
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEV 387
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 246/436 (56%), Gaps = 9/436 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L D + + ++ I + S S+ + R +F+ ++ +N L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR-KRTIYVWNALFRALTLA 156
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--GRCLL--IGIGGSVHSLIFKVGLDSD 135
E + L+ +M + G+ D FTY +V+KAC C + G +H+ + + G +S
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSH 216
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-- 193
YI TL+ MYA +D A VF MPVR+VVSWS+MIA + +AL+ F M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMT 276
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ + SPNSVT+VS++ AC SL + G IH Y + GL+ + + +ALV MY +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ +VF+ M ++++ SW +IS +G G AI +F +M+ G P ++F ++L AC
Sbjct: 337 DVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GLV+EGK F+ M R + IKP +EHY CMVD+LGRA ++EA ++++M TEP +
Sbjct: 397 SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
S LG+CR HG V L + + L LEP+ NYVL A + + + WD + +
Sbjct: 457 WGSLLGSCRIHGNV-ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 434 QKGLNKVPGCSWVKVN 449
+GL K+PG W++V
Sbjct: 516 HRGLQKLPGRCWMEVR 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 24/336 (7%)
Query: 51 HFTRSLFNNLPVTPPL--FAYNTLI---RAYAKTS--------CSIESIKLFDEMLKTGL 97
++T + P+ PPL A N L A AK S C +K +L
Sbjct: 14 YYTVNFLPRSPLKPPLCSVALNNLSISSGAGAKISNNQLIQSLCKEGKLKQALRVLSQES 73
Query: 98 RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P TY ++ CG + G VH I G D D ++ L+ MY+ +D A+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT---- 213
VF++ R + W+++ + L ++ +M + T ++ AC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+ ++ G+ IH++ G V + T LV+MY++ G V+ A VFN M +N+ SW+
Sbjct: 194 TADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSA 253
Query: 274 MISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI+ A NG+ A+ F +M+ P+S++ ++L AC+ L +++G+ + R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILR 313
Query: 332 --VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +I P + +V M GR G ++ + M
Sbjct: 314 RGLDSILPVI---SALVTMYGRCGKLDVGQRVFDRM 346
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LK R+ SP+ T L+ C ++ G +H + + NG + D L T L+ M
Sbjct: 62 LKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGM 121
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YS G V+ A KVF+ R++ + W + L G G + L+ KM + G++ D ++
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 307 SAILSAC-------SHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEA 358
+ +L AC HL +GK + R YN + +VDM R G ++ A
Sbjct: 182 TYVLKACVASECTADHL---TKGKEIHAHLTRRGYNSHVYI--MTTLVDMYARFGCVDYA 236
Query: 359 YHIIRNMPTE 368
++ MP
Sbjct: 237 SYVFNGMPVR 246
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 250/435 (57%), Gaps = 14/435 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H LK + +T +S + T S+ + S+F + P F YNT+IR
Sbjct: 16 QVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQID-EPSSFDYNTMIRGNV 74
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E++ L+ +M++ G+ PD FTYPFV+KAC ++ G VH +FK+GL+ D
Sbjct: 75 NDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVI 134
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L+ MY C EI A VF M + V SWS++I + ++ L + +M
Sbjct: 135 VQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEG 194
Query: 198 ESP-NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
TLV+++SACT L + G+ IH + N EL+V + T+L++MY K G +EK
Sbjct: 195 RCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKG 254
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF M EKN S+T+MISGLA +GRG A+ +F++MI+ GL PD + + + SACSH
Sbjct: 255 LRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHA 314
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV+EG F M + I+PT++HYGCMVD+LGR G+++EAY +I++M +PN VI RS
Sbjct: 315 GLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRS 374
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
L AC+ H + +GK+ L L +Y++ A++ + + WD A++ +
Sbjct: 375 LLSACKVHHNL-----EIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKL 429
Query: 433 NQKGLNKVPGCSWVK 447
++ L + PG S ++
Sbjct: 430 AERNLVQTPGFSLIE 444
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 233/400 (58%), Gaps = 10/400 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N LI A+A+ +S+ LF M+ +G+ PD FT ++ AC R + G +H +
Sbjct: 469 SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ GL+ D++IG +L+ +Y C + + K +F++M + +V W+ MI GF + P +AL
Sbjct: 529 LRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEAL 588
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F +M P + + ++ AC+ + +R G+ +HS+A+ L D + AL++MY
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG +E++ +F+ + EK+ W ++I+G +G G AI LF M G +PDS +F
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L AC+H GLV EG Y +M +Y +KP +EHY C+VDMLGRAG + EA ++ MP
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP++ I S L +CRN+G L + + + K LL+LEP NYVL +++ + G WD +
Sbjct: 769 EPDSGIWSSLLSSCRNYGD-LEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRK 827
Query: 428 LMVAINQKGLNKVPGCSWVK---------VNDGSAEEMSK 458
+ + + GL+K GCSW++ V+DGS E K
Sbjct: 828 VRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKK 867
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 162/308 (52%), Gaps = 8/308 (2%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNT 71
K +H ++H L + N ++S I+ S S +R +F+ LF YN
Sbjct: 106 KNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAK-EKDLFLYNA 164
Query: 72 LIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y++ + ++I LF E+L T L PDNFT P V KAC + +G +VH+L K
Sbjct: 165 LLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA 224
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G SD ++GN L+ MY C ++ A VFE M R++VSW+S++ + VF
Sbjct: 225 GGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284
Query: 191 HRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
R+ ++ E P+ T+V+++ AC ++ VR G +H A G+ +V + +LV+MY
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISF 306
SKCG++ +A +F++ KN+ SW +I G + G L +M + ++ + ++
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 307 SAILSACS 314
+L ACS
Sbjct: 405 LNVLPACS 412
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 5/322 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKAC 111
R+LF+ + + ++NT+I Y+K +L EM + +R + T V+ AC
Sbjct: 353 ARALFD-MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
Query: 112 -GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
G L+ + +H F+ G D+ + N + YA C +D A+ VF M + V SW
Sbjct: 412 SGEHQLLSLK-EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+++I P +L +F M + P+ T+ SL+ AC L +R G+ IH + +
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
NGLELD +G +L+ +Y +C + +F+ M K+L W +MI+G + N A+
Sbjct: 531 NGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDT 590
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F +M+ G+KP I+ + +L ACS + + GK A ++ ++DM
Sbjct: 591 FRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKE-VHSFALKAHLSEDAFVTCALIDMYA 649
Query: 351 RAGLIEEAYHIIRNMPTEPNAV 372
+ G +E++ +I + + AV
Sbjct: 650 KCGCMEQSQNIFDRVNEKDEAV 671
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 6/257 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+++ACG I +G VH+L+ L +D + ++ MY+AC ++ VF+ +
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESI 224
D+ ++++++G+ DA+ +F + A + +P++ TL + AC + +V GE++
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H+ A+ G D +G AL+ MY KCG VE A KVF MR +NL SW ++ ++NG
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 285 NYAISLFAKMI---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+F +++ + GL PD + ++ AC+ +G V G +A I +
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHGLAFKLGITEEVTV 336
Query: 342 YGCMVDMLGRAGLIEEA 358
+VDM + G + EA
Sbjct: 337 NNSLVDMYSKCGYLGEA 353
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 143/313 (45%), Gaps = 7/313 (2%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L+ L+ + I IS L S+ + +F+ + L +N +I +++
Sbjct: 523 EIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKME-NKSLVCWNVMITGFSQN 581
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ F +ML G++P V+ AC + + +G VHS K L D ++
Sbjct: 582 ELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVT 641
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ MYA C ++ ++ +F+ + +D W+ +IAG+ A+++F M+
Sbjct: 642 CALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGR 701
Query: 200 PNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+S T + ++ AC V G + + + G++ + +V+M + G + +A K
Sbjct: 702 PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALK 761
Query: 259 VFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC-SHL 316
+ N M E + W+ ++S + G + K+++ L+P+ +LS + L
Sbjct: 762 LVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE--LEPNKAENYVLLSNLYAGL 819
Query: 317 GLVDEGKNYFDEM 329
G DE + M
Sbjct: 820 GKWDEVRKVRQRM 832
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 267/490 (54%), Gaps = 45/490 (9%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
++Q K + L +H +K SL ++ ++++ + + + L + LF + P +
Sbjct: 20 ILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVK-EPNGY 78
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLK-------TGLRPDNFTYPFVVKACGRCLLIGIG 120
YN +IRA+ +I + EML+ + PD FT+PFV+K+C + +G
Sbjct: 79 LYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLG 138
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------------------ 150
VH+ + K G S+ + N L+ MY C
Sbjct: 139 KQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGV 198
Query: 151 -EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
++ A A+F+ MP R +VSW++MI+G+ S +DAL VF +M++ P+ ++++S++
Sbjct: 199 GQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVL 258
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
AC L + G+ IH Y NGL ++ AL+EMYSKCG + +A+++F+ M + ++
Sbjct: 259 PACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVI 318
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW+ MI GLA++G+ AI LF +M + ++P+ I+F +LSAC+H G +EG YFD M
Sbjct: 319 SWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSM 378
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
++ Y+I+P +EHYGC+VD+LGRAG + +A +I MP +P++ I S L +CR H
Sbjct: 379 SKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSN--- 435
Query: 390 LDDNLGKL--LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
LD + + L +LEP+ NYVL +++ + WD + + I K + K PG S +
Sbjct: 436 LDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLID 495
Query: 448 VNDGSAEEMS 457
+N+ E +S
Sbjct: 496 INNVVQEFVS 505
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 239/402 (59%), Gaps = 12/402 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L LF+ +P + ++ T+I AY+ + +++K M + G+RP+ FTY V++
Sbjct: 106 LEEAEDLFDEMP-ERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLR 163
Query: 110 ACGRCLLIGIGG--SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
AC G+ +H I K GL+SD ++ + L+ +Y+ ++D A VF+EMP RD+
Sbjct: 164 ACD-----GLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDL 218
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
V W+S+I GF ++AL +F RMK A + TL S++ ACT L + G +H +
Sbjct: 219 VVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH 278
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ + D+ L AL++MY KCG +E A F+ M EK++ SW+ M++GLA NG A
Sbjct: 279 VL--KFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQA 336
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ LF M ++G +P+ I+ +L ACSH GLV++G YF M +++ + P EHYGC++D
Sbjct: 337 LELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLID 396
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
+LGRAG ++EA +I M EP++V R+ LGACR H V L K +++LEPE
Sbjct: 397 LLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNV-DLAIYAAKKIIELEPEDAG 455
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y+L +++ + + W+ AE+ + +G+ K PGCSW++V+
Sbjct: 456 TYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVD 497
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 7/275 (2%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
+++ D M + G+ D TY ++K C + G VH IF G + ++ NTLL
Sbjct: 38 RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
MY ++ A+ +F+EMP R+VVSW++MI+ + + ALK M PN
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMF 156
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T S++ AC L N+R +H + GLE DV + +AL+++YSK ++ A VF+ M
Sbjct: 157 TYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
++L W +I G A N GN A++LF +M + G D + +++L AC+ L L++ G+
Sbjct: 214 PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
V + ++DM + G +E+A
Sbjct: 274 QVH---VHVLKFDQDLILNNALIDMYCKCGSLEDA 305
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 226/387 (58%), Gaps = 1/387 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ P + +N L+ + + +++ F M G+ P+ T + ACG+ + +G
Sbjct: 460 IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H + + ++ +G+ L+ MY+ C ++VA +VF E+ RDVV W+S+I+
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL + M L+N N+VT+VS + AC+ L +R G+ IH + + GL+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L++MY +CG ++K+ ++F+LM +++L SW +MIS +G G A++LF + GLKP
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKP 699
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F+ +LSACSH GL++EG YF M Y + P +E Y CMVD+L RAG E
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP EPNA + S LGACR H L + + L +LEP+ NYVL A++ S +G
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNP-DLAEYAARYLFELEPQSSGNYVLMANIYSAAGR 818
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ AA++ + ++G+ K PGCSW++V
Sbjct: 819 WEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ LI + E++ +F +M+ G++P++ T V AC L+ G +
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Query: 124 HSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H KV LDSD +GN+L+ YA C+ ++VA+ F + D+VSW++M+AG+ S
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGS 444
Query: 183 PSD-----------------------------------ALKVFHRMKLANESPNSVTLVS 207
+ AL+ F RM PN+ T+
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++AC + N++ G+ IH Y + N +EL +G+AL+ MYS C +E A VF+ + ++
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ W +IS A +GR A+ L +M + ++ ++++ + L ACS L + +GK
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R + ++DM GR G I+++ I MP
Sbjct: 625 FIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C + + +G VH+ + G+D +++G+ LL +Y ++ A+ +F++M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R+V SW++++ + + +K+F+ M P+ + AC+ L N R G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
++ Y + G E + + ++++M+ KCG ++ A + F + K++ W IM+SG G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ + M +G+KPD ++++AI+S + G +E YF EM + + KP + +
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRN-----HGQVLY 389
++ + G EA + R M E PN++ + S + AC N HG+ ++
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 166/360 (46%), Gaps = 45/360 (12%)
Query: 8 TLIQLSKTVHHLH---QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVT 63
+++Q + +++L Q+H + +D + SR + + R +F+ +
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-E 152
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+F++ ++ Y E+IKLF M+ G+RPD+F +P V KAC +G V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ + +G + + + ++L M+ C +D+A+ FEE+ +DV W+ M++G+ +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
ALK MKL+ P+ VT +++S
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISG-------------------------------- 300
Query: 244 VEMYSKCGHVEKAFKVFNLMR-----EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
Y++ G E+A K F M + N+ SWT +I+G NG A+S+F KM+ G
Sbjct: 301 ---YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KP+SI+ ++ +SAC++L L+ G+ +V + + +VD + +E A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A + M L N S++ C L N+R G +H+ VVNG+++ LG+ L
Sbjct: 71 NNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRL 130
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+E+Y + G VE A ++F+ M E+N+ SWT ++ G I LF M+ G++PD
Sbjct: 131 LEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDH 190
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
F + ACS L GK+ +D M + + G ++DM + G ++ A
Sbjct: 191 FVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIA 244
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 265/458 (57%), Gaps = 11/458 (2%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLK-----TSLDHNTCIISRFILTSLSISLHFTRSLFNN 59
I LI+ +++ L Q+H L +S+ C I F S + + R LF+
Sbjct: 59 RIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQ 118
Query: 60 LPVTPPLFAYNTLIRAYAKTSC-SIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLI 117
+ P +F++N++IR +++ S E + LF +M++ G P+ FT FV+KAC +
Sbjct: 119 IQ-RPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSAL 177
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH+ + K G S ++ L+ YA C++I +A VF+E+ R++V+WS+MI+G+
Sbjct: 178 EEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGY 237
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
++AL +F M+ A P+ VT+VS++SAC + + G+ +H+Y +E D+
Sbjct: 238 ARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDL 297
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
L TALV MY+KCG +E+A +VF+ M K+ ++W+ MI GLA NG A+ F +M +
Sbjct: 298 ELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEA 357
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+KP+ ++F +LSAC+H GLV EG+ Y+ M + I P+ME YGCMVD+L RA L+E+
Sbjct: 358 KVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVED 416
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
A ++ MP PN VI R+ L C+ + L + + + LL+LEP NY+L +++ +
Sbjct: 417 ACTLVETMPISPNPVIWRTLLVGCKK-SKNLDKSEVVAQRLLELEPHNAENYILLSNLYA 475
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
W+ +++ + G+ VPGCS ++V DG E
Sbjct: 476 SMSQWEKMSQVRKKMKGMGIKAVPGCSSIEV-DGLVHE 512
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 248/433 (57%), Gaps = 4/433 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
++++H ++T L + + S FI + S+ R LF+ L V + +N +I A
Sbjct: 543 VNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRH-VTTWNAMIGGAA 601
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ C E++ LF +M + G PD T+ ++ A + VHS GL D
Sbjct: 602 QQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLR 660
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+GN L+ Y+ C + AK VF++M R+V +W+ MI G DA F +M
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P++ T VS++SAC S + + +H++AV GL D+ +G ALV MY+KCG ++ A
Sbjct: 721 IVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDAR 780
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF+ M E+++ SWT+MI GLA +GRG A+ F KM G KP+ S+ A+L+ACSH G
Sbjct: 781 SVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAG 840
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVDEG+ F M + Y I+PTMEHY CMVD+LGRAGL+EEA I NMP EP+ +
Sbjct: 841 LVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGAL 900
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
LGAC +G L + + K LKL+P+ + YVL +++ + +G W+ + + +KG+
Sbjct: 901 LGACVTYGN-LEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGI 959
Query: 438 NKVPGCSWVKVND 450
K PG SW++V++
Sbjct: 960 RKEPGRSWIEVDN 972
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 201/414 (48%), Gaps = 27/414 (6%)
Query: 46 LSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK----TGLRPDN 101
LSIS F LP L N + A+ + ++ + K MLK G+ D+
Sbjct: 61 LSISGCFKSEKHKYLP--SVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDS 118
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
F+Y +++ C + I + VH I K G++ + Y+ N LLR+Y C + A+ VF++
Sbjct: 119 FSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDK 178
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
+ +++ W++MI G+ DA++V+ +M+ PN +T +S++ AC +N++ G
Sbjct: 179 LLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWG 238
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH++ + +G + DV + TALV MY KCG +E A +F+ M E+N+ SWT+MI GLA
Sbjct: 239 KKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHY 298
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GRG A LF +M + G P+S ++ +IL+A + G ++ K + +
Sbjct: 299 GRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRV 357
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
+V M ++G I++A + M TE + +G HG+ G+ L
Sbjct: 358 GNALVHMYAKSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGR--------GQEAFSL 408
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
++ N L + LS +N + WVKV AEE
Sbjct: 409 FLQMQRNGCLPNLTTYLS-----------ILNASAIASTSALEWVKVVHKHAEE 451
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 174/385 (45%), Gaps = 45/385 (11%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S S+ R +F+ + +F++ +I A+ E+ LF +M + G P+ TY
Sbjct: 368 SGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLS 426
Query: 107 VVKACGRCLLIGIG--GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
++ A + VH + G SD IGN L+ MYA C ID A+ VF+ M
Sbjct: 427 ILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD 486
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RDV+SW++M+ G +A VF +M+ P+S T +SL++ S + +
Sbjct: 487 RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEV 546
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H +AV GL D +G+A + MY +CG ++ A +F+ + +++ +W MI G A G
Sbjct: 547 HKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCG 606
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSA----------------CSHLGLVD-------- 320
A+SLF +M + G PD+ +F ILSA + GLVD
Sbjct: 607 REALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALV 666
Query: 321 ----------EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE-- 368
K FD+M ++ + + M+ L + G +A+ M E
Sbjct: 667 HTYSKCGNVKYAKQVFDDM-----VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGI 721
Query: 369 -PNAVILRSFLGACRNHGQVLYLDD 392
P+A S L AC + G + ++ +
Sbjct: 722 VPDATTYVSILSACASTGALEWVKE 746
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 243/398 (61%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P L +N LI AYA +C + ++ +M+++ ++P+ T ++ C
Sbjct: 134 QQIFDEMP-QRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILSVCSS 192
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +VH + K ++ D ++ N L+ +Y+ C I A VF+ MP+R+VVSW+S+
Sbjct: 193 LRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSL 252
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+ + P++AL F +M+ N P+ +T++ +V C+ L + GE I Y V GL
Sbjct: 253 INGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKIGL 312
Query: 234 -ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ A+ AL++M++KCG++ +A ++F+ M EK + SWTIMI GLA +G G A+ F
Sbjct: 313 LKESPAIANALMDMHAKCGNINRACQIFDGMEEKTIVSWTIMIQGLAMHGHGLSALVRFC 372
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + G KPDS+ F ++LSACSH GLVDEG F M Y+I P MEHYGCMVD+L RA
Sbjct: 373 QMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHISPWMEHYGCMVDILCRA 432
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL++EA+ ++NMP +P+ ++ R+ LGAC G + L + + L +L P+ +YVL
Sbjct: 433 GLVDEAFKFVQNMPIKPDMIVWRTLLGACHTQGNI-SLANQVMNYLCELGPKKSEDYVLL 491
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKV-PGCSWVKVN 449
+++ + + WD E+ + +G+ K PGCS+++ +
Sbjct: 492 SNLFASNAEWDNVGEVRKEMGDRGVTKQDPGCSFIEAD 529
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 183/336 (54%), Gaps = 3/336 (0%)
Query: 33 HNTCIISRFILTSLSISLHFTRSLFNNLPVTPP---LFAYNTLIRAYAKTSCSIESIKLF 89
HN + S+ +++ SI+L T S+ + + +NT+IR Y + + E+I ++
Sbjct: 8 HNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILVY 67
Query: 90 DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC 149
+ + K GL+ D +T FV+KACG +I G +H IFK+G + + I LL +Y
Sbjct: 68 NHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLNLYGLF 127
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
E + +F+EMP RD+V W+++IA + + P +V + M +N PN VT VS++
Sbjct: 128 DEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSIL 187
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S C+SL +R G+++H Y N +E DV + AL+ +YSKCG + A +VF LM +N+
Sbjct: 188 SVCSSLRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVV 247
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SWT +I+G +DN N A+ F +M ++PD I+ ++ CS L + G+ +
Sbjct: 248 SWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYV 307
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++ +K + ++DM + G I A I M
Sbjct: 308 VKIGLLKESPAIANALMDMHAKCGNINRACQIFDGM 343
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 233/430 (54%), Gaps = 1/430 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
Q+HT +KT N + S I T + + ++ LI YA+ +
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E++K F EML G++ DN + + AC + G +H+ + G D IGN
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN 555
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ +YA C I A FE++ +D +SW+ +I+GF DALKVF +M A
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ T S VSA ++ N++ G+ IH+ + G + D+ + AL+ Y+KCG +E A + F
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M EKN SW MI+G + +G GN A++LF KM Q G P+ ++F +LSACSH+GLV
Sbjct: 676 CEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVT 735
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G YF+ M++ + + P HY C+VD++ RAG + A I MP EP+A I R+ L A
Sbjct: 736 KGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSA 795
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C H V + + + LL+LEPE A YVL +++ ++SG WD + + +G+ K
Sbjct: 796 CTVHKNV-EVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854
Query: 441 PGCSWVKVND 450
PG SW++V +
Sbjct: 855 PGRSWIEVKN 864
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 165/323 (51%), Gaps = 2/323 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
T + +N ++ A+ K ES ++F +M GL P+ FTYP +++ C + +G
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ + K G + Y+ + L+ MYA ++D A + + DVVSW+++I+G+ +
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++ALK F M +++ S +SAC + + G IH+ + V+G D+++G A
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV +Y++CG +++A+ F + K+ SW +ISG A +G A+ +FA+M + L+
Sbjct: 557 LVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEAS 616
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+F + +SA +++ + +GK M +E ++ + G IE+A
Sbjct: 617 FFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675
Query: 363 RNMPTEPNAVILRSFLGACRNHG 385
MP E N V + + HG
Sbjct: 676 CEMP-EKNDVSWNAMITGYSQHG 697
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 192/402 (47%), Gaps = 7/402 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L K T + + + L S + +F+ + + ++N+LI A+
Sbjct: 234 QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV-SFNSLISGLAQQ 292
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S +++LF +M + L+PD T ++ AC + G +HS + K G+ SD +
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
LL +Y C +I A +F +VV W+ M+ F D+ S++ ++F +M++
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI 412
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T S++ CTS+ + GE IH+ + G + +V + + L++MY+K G ++ A +
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ E ++ SWT +ISG A + A+ F +M+ G++ D+I FS+ +SAC+ + +
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++G+ + V + +V + R G I+EAY + + + S+ G
Sbjct: 533 NQGRQ-IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSI----SWNG 587
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
Q Y +D L +L A++ S S + N
Sbjct: 588 LISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAAN 629
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 173/336 (51%), Gaps = 13/336 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+NL T ++ +I +++ E+I LF EM G+ P + + V+ C +
Sbjct: 167 RKVFDNL-CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTK 225
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L +G +H+L+FK G + Y+ N L+ +Y+ A+ VF +M +D VS++S+
Sbjct: 226 IKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSL 285
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G AL++F +MK P+ VT+ SL+SAC S + GE +HSY + G+
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D+ + AL+++Y C ++ A ++F + +N+ W +M+ + + +F +
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ 405
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGC--MVDM 348
M GL P+ ++ +IL C+ +G +D G+ ++ + +N+ Y C ++DM
Sbjct: 406 MQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV------YVCSVLIDM 459
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+ G ++ A+ I+R + TE + V + + H
Sbjct: 460 YAKHGKLDTAHVILRTL-TEDDVVSWTALISGYAQH 494
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 4/350 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH LK + + + ++ + ++ L +F ++P + +++ +I + +
Sbjct: 31 KLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMP-NRSVRSWDKIISGFMEK 89
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYI 138
S + LF M++ + P ++ V++AC G + I +H+ I GL I
Sbjct: 90 KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ +YA I A+ VF+ + +D VSW +MI+GF +A+ +F M A
Sbjct: 150 SNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGI 209
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P S++S CT + GE +H+ G L+ + ALV +YS+ + A K
Sbjct: 210 FPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M+ K+ S+ +ISGLA G + A+ LF KM + LKPD ++ +++LSAC+ G
Sbjct: 270 VFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGA 329
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ +G+ + + I M G ++D+ I+ A+ + TE
Sbjct: 330 LCKGEQLHSYVIKA-GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE 378
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N T + L+ C + ++ + +H + G + L LV++Y G ++ KVF
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
M ++++SW +ISG + N + LF+ MI+ + P ISF+++L ACS
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 268/468 (57%), Gaps = 42/468 (8%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
H++H+ +K + + + + I L S+ +L+ R+LF+ + L +YNT+I+ YA+
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLVSYNTMIKGYAE 189
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK--VGLDSDK 136
+ ++ LF EM +G+ PD FT+ + C +G +H+ ++K +DS+
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249
Query: 137 YIGNTLLRMYAACK--------------------------------EIDVAKAVFEEMPV 164
+ + ++ MYA C EI+VA+ +F M
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RDV+SW++MI+G+ S+AL++F M+ P+ VTLV+++SAC L G+ +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 225 HSYAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS---WTIMISGLAD 280
+ + NG+ + L A+++MY+KCG ++ A ++F + KN+++ + MI+GLA
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGLAQ 428
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G G AI++F ++I TGLKPD ++F +L AC H GL++EGK F+ M Y IKP ME
Sbjct: 429 HGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQME 488
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGCMVD+LGR G +EEAY +++ MP E N+VI R+ L ACR HG V + + G+ LL+
Sbjct: 489 HYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNV-KIGEIAGQKLLE 547
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+E + GA YVL +++ + + W+ A ++ + G+ K PG S++++
Sbjct: 548 MEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIEL 595
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 215/422 (50%), Gaps = 51/422 (12%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTP 64
L++ K+ Q+H + L H ISR I L L +R LF+ + P
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC-P 73
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSV 123
LF +NT+IR Y+++ E+I L+ M+ G+ P +NFT+PF++ +C R + G V
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS I K G +SD ++ N L+ +Y+ +++A+ +F+E VRD+VS+++MI G+ + P
Sbjct: 134 HSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 193
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--YAVVNGLELDVALGT 241
AL +F M+ + P+ T V+L S C+ L G+ IH+ Y + ++ ++ L +
Sbjct: 194 ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253
Query: 242 ALVEMYSKCGHV---EKAF-----------------------------KVFNLMREKNLQ 269
A+V+MY+KCG + E+ F K+FN M E+++
Sbjct: 254 AIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI 313
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SWT MISG + G+ + A+ LF +M G+KPD ++ A+LSAC+ LG D GK + +
Sbjct: 314 SWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373
Query: 330 AR--VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR----NMPTEPNAVILRSFLGACRN 383
V+N + ++DM + G I+ A I R NM T + S +
Sbjct: 374 IENGVFNQNTILT--AAVMDMYAKCGSIDSALEIFRRVGKNMKT---GFVFNSMIAGLAQ 428
Query: 384 HG 385
HG
Sbjct: 429 HG 430
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R++F + + A+N +I AY + ++ F +LK G++PD+ T+ ++
Sbjct: 457 SLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
C + +G V SLI + G +SD +I N L+ M+ C ++ A +F +MP RD+V
Sbjct: 516 NVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLV 575
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+++IAGFV A F M+ + P+ +T L++AC S + G +H+
Sbjct: 576 SWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALI 635
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
L+ DV +GT L+ MY+KCG ++ A VF+ + +KN+ SWT MI+G A +GRG A+
Sbjct: 636 TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEAL 695
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M Q G+KPD I+F LSAC+H GL+ EG ++F+ M + +NI+P MEHYGCMVD+
Sbjct: 696 ELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDL 754
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAGL+ EA I M +P++ + + LGAC+ H V L + + + L+L+P
Sbjct: 755 FGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDV-ELAEKVAQKKLELDPNDDGV 813
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
YV+ +++ + +G W ++ + +G+ K PG SW++V+
Sbjct: 814 YVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVD 854
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 183/331 (55%), Gaps = 3/331 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P ++++N L+ Y + E+ +L ++M++ G++PD +T+ +++ AC
Sbjct: 159 KQIFDEMP-DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ GG + SLI G D+D ++G L+ M+ C +D A VF +P RD+++W+SM
Sbjct: 218 AKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSM 277
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G A +F M+ P+ V VSL+ AC + G+ +H+ GL
Sbjct: 278 ITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGL 337
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ ++ +GTAL+ MY+KCG +E A +VFNL++ +N+ SWT MI+G A +GR A F K
Sbjct: 338 DTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNK 397
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
MI++G++P+ ++F +IL ACS + +G+ D + + I ++ M + G
Sbjct: 398 MIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTA-LLSMYAKCG 456
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+ +A ++ + ++ N V + + A H
Sbjct: 457 SLMDARNVFERI-SKQNVVAWNAMITAYVQH 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 172/331 (51%), Gaps = 3/331 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FNNLP L + ++I A+ ++ LF M + G++PD + ++KAC
Sbjct: 262 VFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G VH+ + +VGLD++ Y+G LL MY C ++ A VF + R+VVSW++MIA
Sbjct: 321 ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
GF +A F++M + PN VT +S++ AC+ ++ G IH + G
Sbjct: 381 GFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D + TAL+ MY+KCG + A VF + ++N+ +W MI+ + + + A++ F ++
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALL 500
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G+KPDS +F++IL+ C ++ GK + + + + +V M G +
Sbjct: 501 KEGIKPDSSTFTSILNVCKSPDALELGK-WVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
A ++ +MP E + V + + HG+
Sbjct: 560 MSAMNLFNDMP-ERDLVSWNTIIAGFVQHGE 589
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 2/328 (0%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
NL + ++ +I +A+ E+ F++M+++G+ P+ T+ ++ AC R +
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H I K G +D + LL MYA C + A+ VFE + ++VV+W++MI +V
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYV 484
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ +A+ F + P+S T S+++ C S + G+ + S + G E D+
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH 544
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ ALV M+ CG + A +FN M E++L SW +I+G +G +A F M ++G
Sbjct: 545 IRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG 604
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KPD I+F+ +L+AC+ + EG+ + + G ++ M + G I++A
Sbjct: 605 VKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTG-LISMYTKCGSIDDA 663
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ + N+P + N S + HG+
Sbjct: 664 HLVFHNLPKK-NVYSWTSMITGYAQHGR 690
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 33/312 (10%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
TY +++ C + +G G +H+ I + D ++ N L+ MYA C + AK +F+EM
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P +DV SW+ ++ G+V +A ++ +M P+ T V +++AC NV G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+ S + G + D+ +GTAL+ M+ KCG V+ A KVFN + ++L +WT MI+GLA +
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---------- 332
+ A +LF M + G++PD ++F ++L AC+H +++GK M V
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 333 -----YNIKPTMEH---------------YGCMVDMLGRAGLIEEAYHIIRNM---PTEP 369
Y +ME + M+ + G +EEA+ M EP
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 370 NAVILRSFLGAC 381
N V S LGAC
Sbjct: 406 NRVTFMSILGAC 417
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 227/398 (57%), Gaps = 3/398 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF +P L ++N +I YA+ E+++L+ +M G++P T+ ++ AC
Sbjct: 385 RELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G +H I + G+ S+ ++ N L+ MY C + A+ VFE RDV+SW+SM
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM 503
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG S A K+F M+ P+++T S++S C + + G+ IH +GL
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGL 563
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+LDV LG AL+ MY +CG ++ A VF+ ++ +++ SWT MI G AD G AI LF +
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 294 MIQTGLK-PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M G + PD +F++ILSAC+H GLV EG F M Y + PT+EHYGC+V +LGRA
Sbjct: 624 MQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRA 683
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
+EA +I MP P+A + + LGACR HG + L ++ LKL A Y+L
Sbjct: 684 RRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIA-LAEHAANNALKLNARNPAVYILL 742
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++V + +G WD A++ + +G+ K PG SW++V++
Sbjct: 743 SNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDN 780
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 58/400 (14%)
Query: 59 NLPVTPPLFA---------YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+LP +FA YNT++ YA+ + E + LF +M G+ PD TY ++
Sbjct: 178 DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
A ++ G +H L + GL+SD +G L+ M C ++D AK F+ + RDVV
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVV 297
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
++++IA +A + ++RM+ + N T +S+++AC++ + AG+ IHS+
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G DV +G AL+ MY++CG + KA ++F M +++L SW +I+G A A+
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
L+ +M G+KP ++F +LSAC++ +GK +++ R IK +++M
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMY 476
Query: 350 GRAGLIEEAYHI----------------------------------IRNMPTEPNAVILR 375
R G + EA ++ ++N EP+ +
Sbjct: 477 RRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFA 536
Query: 376 SFLGACRN----------HGQV----LYLDDNLGKLLLKL 401
S L C+N HG++ L LD NLG L+ +
Sbjct: 537 SVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 171/318 (53%), Gaps = 2/318 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN LI A A+ ++E+ + + M G+ + TY ++ AC + G +HS I
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ G SD IGN L+ MYA C ++ A+ +F MP RD++SW+++IAG+ + +A++
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+ P VT + L+SAC + G+ IH + +G++ + L AL+ MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +A VF + +++ SW MI+G A +G A LF +M L+PD+I+F++
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LS C + ++ GK + ++ + +++M R G +++A ++ ++
Sbjct: 538 VLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QH 595
Query: 369 PNAVILRSFLGACRNHGQ 386
+ + + +G C + G+
Sbjct: 596 RDVMSWTAMIGGCADQGE 613
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 12/326 (3%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+F +P + ++N+LI YA+ ++ +LF+EM G P+ TY ++ AC
Sbjct: 83 QVFKEMP-RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +HS I K G D + N+LL MY C ++ A+ VF + RDVVS+++M+
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ + L +F +M SP+ VT ++L+ A T+ + G+ IH V GL
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ +GTALV M +CG V+ A + F + ++++ + +I+ LA +G A + +M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGR 351
G+ + ++ +IL+ACS ++ GK ++ E +++ ++ M R
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG----NALISMYAR 377
Query: 352 AGLIEEAYHIIRNMPTEP----NAVI 373
G + +A + MP NA+I
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAII 403
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 98 RP---DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
RP D TY +++ C R L+ +H+ + + G+ D ++ N L+ MY C+ +
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VF+EMP RDV+SW+S+I+ + A ++F M+ A PN +T +S+++AC S
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ G+ IHS + G + D + +L+ MY KCG + +A +VF + +++ S+ M
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
+ A + LF +M G+ PD +++ +L A + ++DEGK ++
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEG 259
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ + +V M R G ++ A + + + + V+ + + A HG
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQHGH 310
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 227/384 (59%), Gaps = 1/384 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++N L+ + +++F++ML G P+ +T+ ++++C + +G VH+
Sbjct: 497 LISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 556
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K LD + ++G L+ MYA + ++ A+ +F + RD+ +W+ ++AG+
Sbjct: 557 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 616
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+K F +M+ PN TL S +S C+ + + +G +HS A+ G D+ + +ALV+
Sbjct: 617 AVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVD 676
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG VE A VF+ + ++ SW +I G + +G+G A+ F M+ G PD ++
Sbjct: 677 MYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVT 736
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSACSH+GL++EGK +F+ ++++Y I PT+EHY CMVD+LGRAG E I M
Sbjct: 737 FIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEM 796
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
N +I + LGAC+ HG + + + K L +LEPE+ +NY+L +++ + G WD
Sbjct: 797 KLTSNVLIWETVLGACKMHGNIEFGERAAMK-LFELEPEIDSNYILLSNMFAAKGMWDDV 855
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
+ ++ +G+ K PGCSWV+VN
Sbjct: 856 TNVRALMSTRGVKKEPGCSWVEVN 879
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 174/323 (53%), Gaps = 2/323 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + +++ +I + S E+ ++F M +G+ P+ FT +V A + G S+
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ + K G + D + N L+ MY + VFE RD++SW+++++GF ++
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
L++F++M +PN T +S++ +C+SL +V G+ +H+ V N L+ + +GTAL
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY+K +E A +FN + +++L +WT++++G A +G+G A+ F +M + G+KP+
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ ++ LS CS + +D G+ MA M +VDM + G +E+A +
Sbjct: 634 FTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFD 692
Query: 364 NMPTEPNAVILRSFLGACRNHGQ 386
+ + + V + + HGQ
Sbjct: 693 GLVSR-DTVSWNTIICGYSQHGQ 714
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 149/269 (55%), Gaps = 1/269 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S ++ +F +P + ++ LI + ++ LF EM + G+ + FTY +
Sbjct: 178 SANYACKVFGEIP-ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATAL 236
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC CL + G VH+ KVG SD ++G+ L+ +YA C E+ +A+ VF MP ++ V
Sbjct: 237 KACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAV 296
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++++ GF L +F RM + + + TL +++ C + N+RAG+ +HS A
Sbjct: 297 SWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLA 356
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ G ELD + LV+MYSKCG A KVF + + ++ SW+ +I+ L G+ A
Sbjct: 357 IRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAA 416
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F +M +G+ P+ + ++++SA + LG
Sbjct: 417 EVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N L+ +A+ + + + LF M + + FT V+K C + G VHSL
Sbjct: 297 SWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLA 356
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++G + D++I L+ MY+ C A VF + DVVSWS++I +A
Sbjct: 357 IRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAA 416
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+VF RM+ + PN TL SLVSA T L ++ GESIH+ G E D + ALV MY
Sbjct: 417 EVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMY 476
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G V+ +VF ++L SW ++SG DN + + +F +M+ G P+ +F
Sbjct: 477 MKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFI 536
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNM 365
+IL +CS L VD GK ++ V N + G +VDM + +E+A I +
Sbjct: 537 SILRSCSSLSDVDLGKQVHAQI--VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 148/285 (51%), Gaps = 6/285 (2%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C + G ++H + K G++ D ++ N+L+ +YA C + A VF E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDVVSW+++I GFVA S A+ +F M+ N T + + AC+ +++ G+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+ A+ G D+ +G+ALV++Y+KCG + A +VF M ++N SW +++G A G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY- 342
++LF +M + + + S +L C++ G + G+ R I ++ +
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIR---IGCELDEFI 367
Query: 343 -GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
C+VDM + GL +A + + +P+ V + + GQ
Sbjct: 368 SCCLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSAIITCLDQKGQ 411
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 262/474 (55%), Gaps = 40/474 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI---LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K+++ + Q H + T L + ++ + + S SL + LF+ +P P +F YN
Sbjct: 26 KSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIP-KPDVFIYN 84
Query: 71 TLIRAYAK-TSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
T+I+A+A + S S+++F M++ +G P+ +T+ FV KACG L + G +
Sbjct: 85 TMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAI 144
Query: 129 KVGLDSDKYIGNTLLRMYA-------------------------------ACKEIDVAKA 157
K+GL+S+ ++ N ++RMYA EI AK
Sbjct: 145 KIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKE 204
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F+EM RDVVSW+++IAG+V +AL +FH M PN TL S ++AC +L+
Sbjct: 205 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA 264
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ--SWTIMI 275
+ G IH Y + ++++ L +L++MY+KCG ++ A KVF+ L+ W MI
Sbjct: 265 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 324
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
G A +G+ AI LF +M + P+ ++F A+L+ACSH LV+EG+ YF MA Y I
Sbjct: 325 GGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGI 384
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
+P +EHYGCMVD+LGR+GL++EA + NMP P+A I + LGACR H + +G
Sbjct: 385 EPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDI-ERGQRIG 443
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
K++ +L+ + +VL A++ S SG WD A + I G K PGCS +++N
Sbjct: 444 KIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELN 497
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 242/402 (60%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + R LF + P + +N++ R Y++ + +E LF E+L+ G+ PDN+T+P ++
Sbjct: 78 SMSYARHLFEAMS-EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + G +H L K+GLD + Y+ TL+ MY C+++D A+ VF+ + VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+++MI G+ + P++AL +F M+ PN +TL+S++S+C L ++ G+ IH YA
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ V + TAL++M++KCG ++ A +F MR K+ Q+W+ MI A++G+ ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I+F +L+ACSH G V+EG+ YF +M + I P+++HYG MVD+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L RAG +E+AY I +P P ++ R L AC +H L L + + + + +L+ G +
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN-LDLAEKVSERIFELDDSHGGD 435
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YV+ +++ + + W+ L + + KVPGCS ++VN+
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 223/388 (57%), Gaps = 1/388 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P L ++N L+ + + ++F +ML G +P+ FT+ V+++C L G
Sbjct: 214 TNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGK 273
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ I K D D ++G L+ MYA + ++ A F+ + RD+ SW+ +I+G+ D
Sbjct: 274 QVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTD 333
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A+K F +M+ PN TL S +S C+ + + G +H+ AV G D+ +G+
Sbjct: 334 QAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGS 393
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV++Y KCG +E A +F + +++ SW +ISG + +G+G A+ F M+ G+ P
Sbjct: 394 ALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMP 453
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +F +LSACS +GLV+EGK FD M+++Y I P++EHY CMVD+LGRAG E
Sbjct: 454 DEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIF 513
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I M P ++I + LGAC+ HG V + + K L ++EP + ++Y+L +++ + G
Sbjct: 514 IEEMNLTPYSLIWETVLGACKLHGNVDF-GEKAAKKLFEMEPMMDSSYILLSNIFASKGR 572
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
WD + + +G+ K PGCSWV+V+
Sbjct: 573 WDDVRNIRALMTSRGIKKEPGCSWVEVD 600
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 191/376 (50%), Gaps = 24/376 (6%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV-----TPPLFAYNTLIRAY 76
LH L L++ C I F+ SL ++++ L V P + A++ +I
Sbjct: 73 LHALALRSG-----CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGL 127
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ E+ +LF M + G RP+ FT +V + G S+H I K G +SD
Sbjct: 128 DQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDN 187
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N L+ MY + ++ VFE M D+VSW+++++GF + ++F++M L
Sbjct: 188 LVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLE 247
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
PN T +S++ +C+SL++ G+ +H++ + N + D +GTALV+MY+K +E A
Sbjct: 248 GFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDA 307
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
F+ + +++ SWT++ISG A + A+ F +M + G+KP+ + ++ LS CSH+
Sbjct: 308 GVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHM 367
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYG------CMVDMLGRAGLIEEAYHIIRNMPTEPN 370
++ G+ +++ + H+G +VD+ G+ G +E A I + + + +
Sbjct: 368 ATLENGR-------QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISR-D 419
Query: 371 AVILRSFLGACRNHGQ 386
V + + HGQ
Sbjct: 420 IVSWNTIISGYSQHGQ 435
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 4/310 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ LF +P + ++N L+ YA+ + +KLF +M + + FT V+K
Sbjct: 1 MELAERLFFGMPEKNGV-SWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK 59
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C + G +H+L + G + D+++G +L+ MY+ C + A VF ++ DVV+
Sbjct: 60 GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WS+MI G +A ++FH M+ PN TL SLVS T++ ++R G+SIH
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G E D + L+ MY K VE KVF M +L SW ++SG D+
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDM 348
+F +M+ G KP+ +F ++L +CS L + GK + + N + G +VDM
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHI--IKNSSDDDDFVGTALVDM 297
Query: 349 LGRAGLIEEA 358
+A +E+A
Sbjct: 298 YAKARCLEDA 307
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 58/331 (17%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL------FNNLPVTPPLFAYNTLIR 74
Q+H +K S D + F+ T+L R L F+ L V +F++ +I
Sbjct: 274 QVHAHIIKNSSDDDD-----FVGTALVDMYAKARCLEDAGVAFDRL-VNRDIFSWTVIIS 327
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
YA+T + +++K F +M + G++P+ +T + C + G +H++ K G
Sbjct: 328 GYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFG 387
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D ++G+ L+ +Y C ++ A+A+F+ + RD+VSW+++I+G+ AL+ F M
Sbjct: 388 DIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMML 447
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
P+ T + ++SAC+ + G VE
Sbjct: 448 SEGIMPDEATFIGVLSACSFM-----------------------------------GLVE 472
Query: 255 KAFKVFNLMRE-----KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
+ K F+ M + +++ + M+ L G+ N + +F + + L P S+ + +
Sbjct: 473 EGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN-EVKIFIE--EMNLTPYSLIWETV 529
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
L AC G VD G+ +++ ++P M+
Sbjct: 530 LGACKLHGNVDFGEK---AAKKLFEMEPMMD 557
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+E A ++F M EKN SW +++G A G G + LF KM + K + S +L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 313 CSHLGLVDEGK----------------------NYFDEMARVYNI--------KPTMEHY 342
C++ G + EGK + + + VY+ P + +
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 343 GCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
M+ L + G +EA +H++R PN L S + N G + Y
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRY 170
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 265/470 (56%), Gaps = 42/470 (8%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-----FTRSLFNNLPVTPPLFAYNTL 72
L Q+ +KT++ + ++F+ +L S H + + +FN + +P F +N +
Sbjct: 3 QLKQIQAQMIKTAIITEPKLATKFL--TLCTSPHVGDLLYAQRVFNGI-TSPNTFMWNAI 59
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRAY+ + + + +ML + + +++T+PF+++AC L +G VH L+ K+G
Sbjct: 60 IRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGF 119
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFE-------------------------------E 161
SD + N LL +YA C EI A+ +F+ +
Sbjct: 120 GSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLD 179
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP+++VVSW+S+I+G V +AL + + M+ A + V + SL++AC +L + G
Sbjct: 180 MPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQG 239
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLA 279
+H Y + NG+++D +G ALV MY KCG +E+A VF ++ +K++ WT MI G A
Sbjct: 240 RWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFA 299
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+GRG A+ F +M + G++P+SI+F+A+L ACS+ GLV+EGK F M YN+ P++
Sbjct: 300 IHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSI 359
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
EHYGCMVD+LGR+G ++EA +I+ MP +P+AVI + L AC H L L +G L+
Sbjct: 360 EHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFL-LGSQVGAHLV 418
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + Y+ A++ + G W AAE+ + + G+ PG S V +N
Sbjct: 419 EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLN 468
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 261/466 (56%), Gaps = 21/466 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPV 62
RH +L+Q K + + ++ ++ + ++ + ++ S+ + +F++
Sbjct: 33 RHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQ- 91
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P ++ Y LI + + I L+ +M+ + L PD++ V+KACG L + G
Sbjct: 92 NPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGRE 151
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS------------- 169
VHS + K+GL S++ I L+ +Y C + A+ VF+EMP RDVV+
Sbjct: 152 VHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGI 211
Query: 170 -----WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
W++MI G V + AL+VF M+ + PN VT+V ++SAC+ L ++ G +
Sbjct: 212 KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWV 271
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
SY + +EL+ +G AL+ MYS+CG +++A +VF M+EKN+ ++ MI G A +G+
Sbjct: 272 RSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKS 331
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF +I+ G P S++F +L+ACSH GL + G F MA+ Y I+P +EHYGC
Sbjct: 332 VEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGC 391
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+LGR G +EEAY IR M P+ V+L + L AC+ HG L L + + K L+ +
Sbjct: 392 MVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGN-LELAERVAKSLVACKNA 450
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L ++ S SG W AAE+ + ++G+ K PGCS ++VN+
Sbjct: 451 DSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNN 496
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 243/433 (56%), Gaps = 34/433 (7%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFV 107
S+ R LF+ V L ++NTLI Y + E++++F M+ G + PD T V
Sbjct: 170 SMAEARKLFDGSHVRD-LVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------- 160
V + + +G +H + G+ + N ++ MY C +++ AK+VFE
Sbjct: 229 VSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288
Query: 161 ------------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
EMP RDV W++++ G+V C +AL++FH M+ A
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+ +T+V+L+SAC+ L + G +H Y + L V LGT LV+MYSKCG++EKA
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKA 408
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF + EKN +WT MISGLA++G + AI F +MI+ GL+PD I+F +LSAC H
Sbjct: 409 IRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHA 468
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV EG+ +F M Y+++ M+HY CMVD+LGRAG ++EA H++ MP EP+AV+ +
Sbjct: 469 GLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGA 528
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
ACR HG + L + L++L+P YVL A++ + + A ++ V + G
Sbjct: 529 LFFACRMHGNIT-LGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLG 587
Query: 437 LNKVPGCSWVKVN 449
+ KVPGCS +++N
Sbjct: 588 VEKVPGCSCIELN 600
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 175/364 (48%), Gaps = 46/364 (12%)
Query: 63 TPPLFA--YNTLIRAYA---KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
TPP A YN +RA + + L+ +L++ RPD+ T+PF++KAC R
Sbjct: 78 TPPDSASPYNAALRALSLCTDRGLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQER 136
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G +V + +G +D ++ N + A C + A+ +F+ VRD+VSW+++I G+
Sbjct: 137 NYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGY 196
Query: 178 VACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
V P +AL++F RM +P+ VT++ +VS L ++ G +H Y +G+
Sbjct: 197 VRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCT 256
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG-------------- 282
V L +++MY KCG +E+A VF + +K + SWT MI G A G
Sbjct: 257 VRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPE 316
Query: 283 -----------------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--- 322
RG A+ LF M + ++PD I+ +LSACS LG ++ G
Sbjct: 317 RDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWV 376
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+Y D ++ +VDM + G IE+A + + +P E NA+ + +
Sbjct: 377 HHYIDRRRVSLSVMLGTN----LVDMYSKCGNIEKAIRVFKEIP-EKNALTWTAMISGLA 431
Query: 383 NHGQ 386
NHG
Sbjct: 432 NHGH 435
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 258/479 (53%), Gaps = 40/479 (8%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH---FTRSLFN 58
I I L+ +KT HL Q+H FL+ L H+ I+S F+ S+ SLH + ++FN
Sbjct: 8 IESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFV--SVCTSLHQIPYATTIFN 65
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLI 117
+ P + +N++I+A++ +S F+ M T + PDNFT+P ++KA
Sbjct: 66 HTH-HPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDY 124
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
+G +H+ + +G + LL +Y+ C +++ A VF+EM R+VV W+ MI GF
Sbjct: 125 DLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGF 184
Query: 178 VACDSPSDALKVFHRMK-------------LANE------------------SPNSVTLV 206
LK+F RM LA P+ TLV
Sbjct: 185 CKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLV 244
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDV-ALGTALVEMYSKCGHVEKAFKVFNLMRE 265
+++ C L +V AGE IHSYA GL V ++G +LV+ Y KCG++E A+KVFN M +
Sbjct: 245 TVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTK 304
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
KN+ SW MISGL NG+G + LF KM + G+ P +F +L+ C+H G VD+G+
Sbjct: 305 KNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREI 364
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
FD M + + P +EHYGC+VD+LGR G ++EAY +IRNMP PNA + + L ACR HG
Sbjct: 365 FDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHG 424
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ + K L++LEP NYVL ++V + W+ ++ V + G+ K PG S
Sbjct: 425 D-REVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQS 482
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 225/387 (58%), Gaps = 1/387 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ P + +N L+ + + +++ F M G+ P+ T + ACG+ + +G
Sbjct: 460 IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H + + ++ +G+ L+ MY+ C ++VA +VF E+ RDVV W+S+I+
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL + M L+N N+VT+VS + AC+ L +R G+ IH + + GL+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L++MY +CG ++K+ ++F+LM +++L SW +MIS +G G A++LF GLKP
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKP 699
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F+ +LSACSH GL++EG YF M Y + P +E Y CMVD+L RAG E
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP EPNA + S LGACR H L + + L +LEP+ NYVL A++ S +G
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNP-DLAEYAARYLFELEPQSSGNYVLMANIYSAAGR 818
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ AA++ + ++G+ K PGCSW++V
Sbjct: 819 WEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ LI + E++ +F +M+ G++P++ T V AC L+ G +
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Query: 124 HSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H KV LDSD +GN+L+ YA C+ ++VA+ F + D+VSW++M+AG+ S
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGS 444
Query: 183 PSD-----------------------------------ALKVFHRMKLANESPNSVTLVS 207
+ AL+ F RM PN+ T+
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++AC + N++ G+ IH Y + N +EL +G+AL+ MYS C +E A VF+ + ++
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ W +IS A +GR A+ L +M + ++ ++++ + L ACS L + +GK
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R + ++DM GR G I+++ I MP
Sbjct: 625 FIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C + + +G VH+ + G+D +++G+ LL +Y ++ A+ +F++M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R+V SW++++ + + +K+F+ M P+ + AC+ L N R G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
++ Y + G E + + ++++M+ KCG ++ A + F + K++ W IM+SG G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ + M +G+KPD ++++AI+S + G +E YF EM + + KP + +
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRN-----HGQVLY 389
++ + G EA + R M E PN++ + S + AC N HG+ ++
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 166/360 (46%), Gaps = 45/360 (12%)
Query: 8 TLIQLSKTVHHLH---QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVT 63
+++Q + +++L Q+H + +D + SR + + R +F+ +
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-E 152
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+F++ ++ Y E+IKLF M+ G+RPD+F +P V KAC +G V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ + +G + + + ++L M+ C +D+A+ FEE+ +DV W+ M++G+ +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
ALK MKL+ P+ VT +++S
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISG-------------------------------- 300
Query: 244 VEMYSKCGHVEKAFKVFNLMR-----EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
Y++ G E+A K F M + N+ SWT +I+G NG A+S+F KM+ G
Sbjct: 301 ---YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KP+SI+ ++ +SAC++L L+ G+ +V + + +VD + +E A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A + M L N S++ C L N+R G +H+ VVNG+++ LG+ L
Sbjct: 71 NNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRL 130
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+E+Y + G VE A ++F+ M E+N+ SWT ++ G I LF M+ G++PD
Sbjct: 131 LEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDH 190
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEM 329
F + ACS L GK+ +D M
Sbjct: 191 FVFPKVFKACSELKNYRVGKDVYDYM 216
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 236/417 (56%), Gaps = 37/417 (8%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI----GIGGSVH 124
+N LIRA A ++ ++ L+ +L+ G P T P ++K+ + G+ +VH
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 125 SLIFKVGLDS--------------------------------DKYIGNTLLRMYAACKEI 152
+ K+GL D NTL+ YA +
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
A+A+F+EMP R+ VSWS+M+ G+V +AL +F RM+ P+ LV +++AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L + G+ +H Y N + + V LGTALV+MY+KCG ++ A +VF +M+EKN+ +WT
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI GLA +GRG+ A+ LF++M + G+KPD I+F L AC+H GLVD+G+ FD M R
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRK 473
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y IKP +EHYGCMVD+L R GL+ EA ++ MP +P+A+I + + CR H V L +
Sbjct: 474 YGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV-ELAE 532
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ K ++LEP+ YVL ++ + SG +A E+ + +KG++K PGCS V++
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIK 589
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 34/261 (13%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R+LF+ +P + +++ ++ Y + E++ LF M G+RPD+ V+ AC
Sbjct: 296 ARALFDEMPARNAV-SWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACA 354
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ ++ G VH + + ++G L+ MYA C E+ +A VF+ M ++V++W++
Sbjct: 355 QLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTT 414
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G S+AL++F +M+ P+ + + + ACT H+ V G
Sbjct: 415 MIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACT-----------HTGLVDKG 463
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
EL M K G K ++ + M+ LA NG N A +
Sbjct: 464 REL-------FDSMVRKYGIKPK------------IEHYGCMVDLLARNGLLNEAREMVE 504
Query: 293 KMIQTGLKPDSISFSAILSAC 313
KM +KPD++ + A+++ C
Sbjct: 505 KMP---MKPDALIWGALMAGC 522
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 240/423 (56%), Gaps = 42/423 (9%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGG 121
P LFA N++IRA+ K+ +S + +L +G L+PDN+T F+V+AC + G
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------------CK 150
VH + + G D+D ++ L+ +YA C
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A+ +FE MP RD ++W++MI+G+ +AL VFH M+L N V ++S++S
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
ACT L + G HSY N +++ V L T LV++Y+KCG +EKA +VF M EKN+ +
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W+ ++GLA NG G + LF+ M Q G+ P++++F ++L CS +G VDEG+ +FD M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
+ I+P +EHYGC+VD+ RAG +E+A II+ MP +P+A + S L A R +Y
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR-----MYK 423
Query: 391 DDNLG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ LG K +L+LE YVL +++ + S +WD + + ++ KG+ K PGCS +
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
Query: 447 KVN 449
+VN
Sbjct: 484 EVN 486
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 267/479 (55%), Gaps = 39/479 (8%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTP 64
+L+ K++ L +LH + + L H I + + ++LS S + ++ +F+ + +P
Sbjct: 19 SLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQIS-SP 77
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+F++N +IR Y+ + I S+ +F +ML+ G+ PD TYPF+VKA R G SVH
Sbjct: 78 TIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSVH 137
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACK-------------------------------EID 153
+ I K G +SD++I N+L+ MYA+C E+
Sbjct: 138 AQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMA 197
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+A+ VFE M RDV SWSS I G+V +A+ VF +M+ N VT+VS++SAC
Sbjct: 198 MAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACA 257
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--EKNLQSW 271
L ++ G +H Y + N L + + L T+LV+MY+KCG +E+A VF + + ++ W
Sbjct: 258 HLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIW 317
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI GLA +G ++ LF +M G++ D I++ +L+AC+H GLV E N+F+ + +
Sbjct: 318 NAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVK 377
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
+ PT EHY CMVD+L RAG + AY I +P EP A +L + C NH + L
Sbjct: 378 -RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINH-RNFDLA 435
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ +G+ L++L+P Y+ ++V ++ WD + + A+ ++G+ K PG S+V++++
Sbjct: 436 ETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISE 494
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 257/437 (58%), Gaps = 6/437 (1%)
Query: 17 HHLHQL-HTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
HL + H L K L+ H+ + S + S R +FN +P + + ++N +++
Sbjct: 144 RHLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIP-SRDVVSWNAMMK 202
Query: 75 AYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
AY + + E ++ +M+K G + P+ T V+ AC + +G V G++
Sbjct: 203 AYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGME 262
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+D +G+ L+ MY C EI A+ VF+ + +DVV+W++MI G+ ++A+ +FH M
Sbjct: 263 TDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNM 322
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
K A P+ +TL ++SAC+++ + G + YA GL +V +GTALV+MY+KCG +
Sbjct: 323 KKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDL 382
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSA 312
+KA +VF MR KN+ SW +I GLA NG+G+ AI F M + GLKPD I+F +LSA
Sbjct: 383 DKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSA 442
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
C H GLV +GK +F+ + + I P +EHY CMVD L R+G +EE + I +P + +AV
Sbjct: 443 CVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAV 502
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+L + L ACR V + + + +++LEP NYV+++ + + SG D +A++ +
Sbjct: 503 MLGALLAACRKCKNV-EIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGLM 561
Query: 433 NQKGLNKVPGCSWVKVN 449
++G+NK PGCSWV+++
Sbjct: 562 RERGVNKTPGCSWVEIS 578
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 227/382 (59%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+Y ++I YA+ + E++KLF+EM + G+ PD +T V+ C R L+ G VH I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L D ++ N L+ MYA C + A+ VF EM V+D++SW+++I G+ ++AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 188 KVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+F+ + + SP+ T+ ++ AC SL G IH Y + NG D + +LV+M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A +F+ + K+L SWT+MI+G +G G AI+LF +M Q G++ D ISF
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++L ACSH GLVDEG +F+ M I+PT+EHY C+VDML R G + +AY I NMP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+A I + L CR H V L + + + + +LEPE YVL A++ + + W+
Sbjct: 664 IPPDATIWGALLCGCRIHHDV-KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
L I Q+GL K PGCSW+++
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEI 744
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 185/358 (51%), Gaps = 6/358 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTL 72
++VH QLH LK+ + + + L + + R +F+ + + ++N++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSI 267
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I Y + + + +F +ML +G+ D T V C LI +G +VHS+ K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ NTLL MY+ C ++D AKAVF EM R VVS++SMIAG+ +A+K+F
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ SP+ T+ ++++ C + G+ +H + N L D+ + AL++MY+KCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILS 311
+++A VF+ MR K++ SW +I G + N N A+SLF +++ PD + + +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMPTE 368
AC+ L D+G+ + R N + H +VDM + G + A+ + ++ ++
Sbjct: 508 ACASLSAFDKGREIHGYIMR--NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 163/310 (52%), Gaps = 2/310 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ + + LF +N L+ AK+ SI LF +M+ +G+ D++T+ V K+
Sbjct: 151 VFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H I K G +GN+L+ Y + +D A+ VF+EM RDV+SW+S+I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V+ L VF +M ++ + T+VS+ + C + G ++HS V
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ L++MYSKCG ++ A VF M ++++ S+T MI+G A G A+ LF +M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G+ PD + +A+L+ C+ L+DEGK E + ++ + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 356 EEAYHIIRNM 365
+EA + M
Sbjct: 449 QEAELVFSEM 458
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT +R + ++ ++KL K + P T V++ C + G V + I
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G D +G+ L MY C ++ A VF+E+ + + W+ ++ S ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M + +S T + + +SL +V GE +H + + +G ++G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
V+ A KVF+ M E+++ SW +I+G NG +S+F +M+ +G++ D + ++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 310 LSACSHLGLVDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ C+ L+ G K F R N ++DM + G ++ A +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNT---------LLDMYSKCGDLDSAKAV 353
Query: 362 IRNM 365
R M
Sbjct: 354 FREM 357
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 242/401 (60%), Gaps = 9/401 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ LF+ +P + ++ T+I AY+K ++++L ML+ +RP+ +TY V++
Sbjct: 112 LNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+C + + +H I K GL+SD ++ + L+ ++A E + A +VF+EM D +
Sbjct: 171 SCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 170 WSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+S+I GF A +S SD AL++F RMK A TL S++ ACT L + G H +
Sbjct: 228 WNSIIGGF-AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V + D+ L ALV+MY KCG +E A +VFN M+E+++ +W+ MISGLA NG A+
Sbjct: 287 V--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M +G KP+ I+ +L ACSH GL+++G YF M ++Y I P EHYGCM+D+
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LG+AG +++A ++ M EP+AV R+ LGACR ++ L + K ++ L+PE
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV-LAEYAAKKVIALDPEDAGT 463
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y L +++ + S WD+ E+ + +G+ K PGCSW++VN
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+K ++ +S T L+ C S V G I + NG + L L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY K + A ++F+ M ++N+ SWT MIS + A+ L M++ ++P+ +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 306 FSAILSACS--------HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+S++L +C+ H G++ EG ++ + ++D+ + G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVFAKLGEPED 212
Query: 358 AYHIIRNMPTEPNAVILRSFLGA 380
A + M T +A++ S +G
Sbjct: 213 ALSVFDEMVT-GDAIVWNSIIGG 234
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 273/493 (55%), Gaps = 47/493 (9%)
Query: 3 SRHIETLIQLSKTVHHLHQL--HTLFLKTSLDHNTC--IISRFILTSLSISLHFTRSLFN 58
SR + +L+ T+ H+ Q+ H T D IIS F S + LF
Sbjct: 13 SRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIIS-FCAVSAQGDISHAYLLFL 71
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+LP F +NT++RA+ + L+ ML TG P+N+T+ F+++AC + +
Sbjct: 72 SLPRRTS-FIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLS 130
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID------------------------- 153
G +H+ ++G ++ ++ N LL +YA+C +D
Sbjct: 131 FGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYA 190
Query: 154 ------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
VA+ +F+EMP ++ VSWS+MI G+ +AL++F+ M++A PN +V
Sbjct: 191 KSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVG 250
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++AC L + G IH+Y N + LD LGTAL++MY+KCG VE A +VF+ M +++
Sbjct: 251 ALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRD 310
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ ++T +ISGLA++G AI +F +M G+ P+ ++F +LSACS +GLV+EG F
Sbjct: 311 VFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFK 370
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M +Y I+P ++HYGC+VD+LGRAG++E+A ++R MP EP++ +L + L ACR HG V
Sbjct: 371 SMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDV 430
Query: 388 LYLDDNLGKLLLKLEPEL----GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
LGK ++ E G +VL +++ + + W+ A++ + +K + KVPGC
Sbjct: 431 -----ELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGC 485
Query: 444 SWVKVNDGSAEEM 456
S ++V DG+ E
Sbjct: 486 SLIEV-DGAVFEF 497
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 249/444 (56%), Gaps = 13/444 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI------SLHFTRSLFNNLPVTPPL 66
S +++ ++H +K D +S F+ +L+ L + +LF + + +
Sbjct: 230 SGALNYGREIHAQAMKKGFD-----VSSFVANTLATMYNKCGKLEYGLTLFEKMSMRD-V 283
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++ T+I + +++ F M ++ + P+ +T+ V+ C I G +H+L
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I +GL + + N+++ MYA C ++ + +F EM RD+VSWS++IAG+ S+A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEA 403
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
++ M++ P L S++SAC ++ + G+ +H+Y + GLE + +AL+ M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG +E+A ++F+ ++ SWT MI+G A++G I LF K+ + GL+PDS++F
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GLVD G +YF+ M++ Y I P+ EHYGCM+D+L RAG + +A H+I MP
Sbjct: 524 IGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ V+ + L ACR HG V + +L+LEP ++ A++ + G W AA
Sbjct: 584 FHRDDVVWSTLLRACRVHGDV-ERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642
Query: 427 ELMVAINQKGLNKVPGCSWVKVND 450
++ + KG+ K PG SW+KV D
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKD 666
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 185/356 (51%), Gaps = 11/356 (3%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
L+ V++ LH +KT L ++ + S + + + + + R +F+ +P+ + ++
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN-VVSWT 186
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I + + E++ F EM ++ + D++T+ +KAC + G +H+ K
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D ++ NTL MY C +++ +FE+M +RDVVSW+++I V A++ F
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ ++ SPN T +++S C +L + GE +H+ + GL +++ +++ MY+KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + + +F+ M +++ SW+ +I+G G + A L + M G KP + +++L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG----CMVDMLGRAGLIEEAYHII 362
SAC ++ +++ GK Y + +EH +++M + G IEEA I
Sbjct: 427 SACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R +F+ + + ++ TLI Y + S E++ LF M +++GLR D F KACG
Sbjct: 69 RRMFDKMSQKDEI-SWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G +H K GL + ++G+ LL MY +I + VF EMP+R+VVSW++
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G V +AL F M + +S T + AC + G IH+ A+ G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
++ + L MY+KCG +E +F M +++ SWT +I+ L G+ A+ F
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+M ++ + P+ +F+A++S C++L ++ G+
Sbjct: 308 RMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 244/444 (54%), Gaps = 4/444 (0%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYN 70
LS+ V QLH L + L + + +R + S L R LF+ +P +F +N
Sbjct: 75 LSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWN 134
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
LIRAYA+ +I+L+ EML G + PDNFTYP V+KAC L +G G VH + +
Sbjct: 135 VLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMR 194
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+D ++ L+ MYA C +D A AVF+ VRD V W+SMIA P++AL +
Sbjct: 195 TSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALAL 254
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
M +P VTLVS +SA + G +H Y G L T+L++MY+K
Sbjct: 255 CRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAK 314
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSA 308
G V A +F+ + + L SW MI G +G ++A LF +M + + PD I+F
Sbjct: 315 SGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVG 374
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSAC+H G+V E K FD M VY+IKP ++HY C+VD+LG +G +EA +I+ M +
Sbjct: 375 VLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVK 434
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P++ I + L C+ H V + L K L++LEPE NYVL +++ + SG W+ AA +
Sbjct: 435 PDSGIWGALLNGCKIHKNVELAELALHK-LIELEPEDAGNYVLLSNIYAQSGKWEEAARV 493
Query: 429 MVAINQKGLNKVPGCSWVKVNDGS 452
+ +GL K+ CSW+++ S
Sbjct: 494 RKLMTNRGLKKIIACSWIELKGKS 517
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++++C + G +H+ + GL D + L+ +YA+C + VA+ +F+EMP
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 164 VR-DVVSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRA 220
+ +V W+ +I + A D P +A +R LA S P++ T ++ AC +L+++ A
Sbjct: 126 NQGNVFLWNVLIRAY-ARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGA 184
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H + DV + L++MY+KCG V++A+ VF+ ++ W MI+
Sbjct: 185 GREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQ 244
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISF 306
NGR A++L M G+ P ++
Sbjct: 245 NGRPAEALALCRNMAAEGIAPTIVTL 270
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +++ +C VR G +H+ +V+GL LD L T LV++Y+ CG V A ++F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 261 NLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGL 318
+ M + N+ W ++I A +G AI L+ +M+ G ++PD+ ++ +L AC+ L
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ G+ D RV + + C ++DM + G ++EA+ + + T +AV+ S
Sbjct: 182 LGAGREVHD---RVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVF-DSTTVRDAVVWNS 237
Query: 377 FLGACRNHGQ 386
+ AC +G+
Sbjct: 238 MIAACGQNGR 247
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 248/436 (56%), Gaps = 3/436 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + F+ + P ++ LI AY
Sbjct: 96 QLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDA 155
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+E+I + +G+RPD+FT V+ AC R + G V + K G+ + ++
Sbjct: 156 GRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVA 215
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+D A+ VF++M +DVV+W +M+ G+ + P +AL++F M++
Sbjct: 216 TAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMR 275
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T+ +SACT L + G + + + + LGTAL++MY+KCG +A+ V
Sbjct: 276 PDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMV 335
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR +++ W MI GL G A +L +M ++G+ + +F +L +C+H GLV
Sbjct: 336 FQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLV 395
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I+P +EHYG MVD+L RAGL++EA+ +I++MP E NAV+ + LG
Sbjct: 396 KDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLG 455
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H L +++ K L++LEP NYV+ +++ S SG W+ AA+L + + KG+ K
Sbjct: 456 GCKIHRNA-DLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEK 514
Query: 440 VPGCSWVKVNDGSAEE 455
VP SWV++ DG E
Sbjct: 515 VPASSWVEL-DGKVHE 529
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 146/288 (50%), Gaps = 19/288 (6%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T+PF +K+ R + G +H+ K+ S+ ++ +LL +YA C + A+
Sbjct: 72 PSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQK 131
Query: 158 VFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
F+EM VSW+++I ++ +A+ V + P+S T V +++AC +
Sbjct: 132 AFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVA 191
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
++ GE + + A G+ +V + TA V++Y KCG ++KA VF+ M+ K++ +W M+
Sbjct: 192 DLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVG 251
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G A NG A+ LF M G++PD + + LSAC+ LG +D G+ RV +
Sbjct: 252 GYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGR-------RVVGML 304
Query: 337 PTMEHYG------CMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
E G ++DM + G EA+ + + M NA+IL
Sbjct: 305 QWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMIL 352
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 247/434 (56%), Gaps = 9/434 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L + D + + ++ I + S ++ R +F+ ++ +N L RA A
Sbjct: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTR-KRTIYVWNALFRALALAG 149
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--GRCLL--IGIGGSVHSLIFKVGLDSDK 136
+ ++L+ M G+ D FTY +++KAC CL+ + G +H+ I + G +
Sbjct: 150 RGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHV 209
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ TL+ MYA + A AVF+EMPV++VVSWS+MIA + P +AL++F M L
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269
Query: 197 NES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
PNSVT+VS++ AC + + G+ IH+Y + GL+ + + +AL+ MY++CG +E
Sbjct: 270 THDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLE 329
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+F+ M +K++ W +IS +G G AI +F +MI G P ISF ++L ACS
Sbjct: 330 SGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLV+EGK F+ M + + I+P++EHY CMVD+LGRA ++EA II ++ EP +
Sbjct: 390 HTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVW 449
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S LGACR H V L + K L KLEP NYVL A + + + WD + ++
Sbjct: 450 GSLLGACRIHCHV-ELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDS 508
Query: 435 KGLNKVPGCSWVKV 448
+ L KVPG SW++V
Sbjct: 509 RELQKVPGRSWIEV 522
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 168/354 (47%), Gaps = 22/354 (6%)
Query: 40 RFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP 99
R+ + LS+S F+ P TPP N LI++ C ++K +L P
Sbjct: 18 RYSTSKLSVSS------FSFNPSTPPNSNNNHLIQSL----CKQGNLKQALYLLSHESNP 67
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
T ++ + R + VH L+ G D D ++ L+ M++ +D A+ VF
Sbjct: 68 TQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVF 127
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS---LI 216
++ R + W+++ +D L+++ RM + S + T L+ AC + L+
Sbjct: 128 DKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLV 187
Query: 217 N-VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ ++ G+ IH++ + +G V + T L++MY++ G V A VF+ M KN+ SW+ MI
Sbjct: 188 SFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMI 247
Query: 276 SGLADNGRGNYAISLFAKMIQTGLK--PDSISFSAILSACSHLGLVDEGKNYFDEMAR-- 331
+ A NG+ A+ LF +M+ P+S++ ++L AC+ +++GK + R
Sbjct: 248 ACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRG 307
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ +I P + ++ M R G +E I M + + V+ S + + HG
Sbjct: 308 LDSILPVI---SALITMYARCGKLESGQLIFDRM-HKKDVVLWNSLISSYGLHG 357
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 236/417 (56%), Gaps = 37/417 (8%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI----GIGGSVH 124
+N LIRA A ++ ++ L+ +L+ G P T P ++K+ + G+ +VH
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 125 SLIFKVGLDS--------------------------------DKYIGNTLLRMYAACKEI 152
+ K+GL D NTL+ YA +
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
A+A+F+EMP R+ VSWS+M+ G+V +AL +F RM+ P+ LV +++AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L + G+ +H Y N + + V LGTALV+MY+KCG ++ A +VF +M+EKN+ +WT
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI GLA +GRG+ A+ LF++M + G+KPD I+F L AC+H GLVD+G+ FD M R
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRK 473
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y IKP +EHYGCMVD+L R GL+ EA ++ MP +P+A+I + + CR H V L +
Sbjct: 474 YGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV-ELAE 532
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ K ++LEP+ YVL ++ + SG +A E+ + +KG++K PGCS V++
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIK 589
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 34/261 (13%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R+LF+ +P + +++ ++ Y + E++ LF M G+RPD+ V+ AC
Sbjct: 296 ARALFDEMPARNAV-SWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACA 354
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ ++ G VH + + ++G L+ MYA C E+ +A VF+ M ++V++W++
Sbjct: 355 QLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTT 414
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G S+AL++F +M+ P+ + + + ACT H+ V G
Sbjct: 415 MIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACT-----------HTGLVDKG 463
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
EL M K G K ++ + M+ LA NG N A +
Sbjct: 464 REL-------FDSMVRKYGIKPK------------IEHYGCMVDLLARNGLLNEAREMVE 504
Query: 293 KMIQTGLKPDSISFSAILSAC 313
KM +KPD++ + A+++ C
Sbjct: 505 KM---PMKPDALIWGALMAGC 522
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 242/401 (60%), Gaps = 9/401 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ LF+ +P + ++ T+I AY+K ++++L ML+ +RP+ +TY V++
Sbjct: 112 LNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+C + + +H I K GL+SD ++ + L+ ++A E + A +VF+EM D +
Sbjct: 171 SCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 170 WSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+S+I GF A +S SD AL++F RMK A TL S++ ACT L + G H +
Sbjct: 228 WNSIIGGF-AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V + D+ L ALV+MY KCG +E A +VFN M+E+++ +W+ MISGLA NG A+
Sbjct: 287 V--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M +G KP+ I+ +L ACSH GL+++G YF M ++Y I P EHYGCM+D+
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LG+AG +++A ++ M EP+AV R+ LGACR ++ L + K ++ L+PE
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV-LAEYAAKKVIALDPEDAGT 463
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y L +++ + S WD+ E+ + +G+ K PGCSW++VN
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+K ++ +S T L+ C S V G I + NG + L L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY K + A ++F+ M ++N+ SWT MIS + A+ L M++ ++P+ +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 306 FSAILSACS--------HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+S++L +C+ H G++ EG ++ + ++D+ + G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVFAKLGEPED 212
Query: 358 AYHIIRNMPTEPNAVILRSFLGA 380
A + M T +A++ S +G
Sbjct: 213 ALSVFDEMVT-GDAIVWNSIIGG 234
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 252/403 (62%), Gaps = 8/403 (1%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAY---AKTSCSIESIKLFDEMLKTGLR-PDNFTYPFV 107
+ R+LF+ +P P F YN+LIRA A + + +++ ++ ML+ G P++FT F
Sbjct: 76 YARNLFDQIP-EPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFA 134
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRD 166
+KAC +G G +HS F+ GL+ Y+ LL +YA C+E+ +A+ VF+ M ++
Sbjct: 135 LKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 194
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+ +WS+MI G+ ++AL +F M+ A+ +P+ VT+VS++SAC + G +H+
Sbjct: 195 LAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHA 254
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+ G+ +D+ L TAL++MY+KCG +E+A VF+ M E++ ++W+ MI GLA +G
Sbjct: 255 FIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEV 314
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF++M++ ++P++++F +LSAC+H GLV+EG+ Y+ M + IKP+ME+YGCMV
Sbjct: 315 ALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMV 373
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+ R+ L++EAY + M PN+VI R+ L A +N + + + K LL+LEP
Sbjct: 374 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNR-FDIVQSASKKLLELEPCNP 432
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
NYVL +++ + + WD + + + + +N V GCS +++N
Sbjct: 433 ENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEIN 475
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 237/434 (54%), Gaps = 34/434 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ +P P L ++ +L+ + + E+I LF ++ G RPD F + A
Sbjct: 66 ARKLFDEIP-NPDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASS 124
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE--------------------- 151
+G +VH LIF++GLD + +GN L+ MY+ C +
Sbjct: 125 GAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGS 184
Query: 152 ----------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
+D A + F+++PVR VV+W+++I G V P AL++F RM L P
Sbjct: 185 MLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPT 244
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
VT+V ++SAC + + G IH Y L++ + AL++MY+K GH+E AF VF
Sbjct: 245 HVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQ 304
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
++ K+ +WT MIS G G A+ LF M++ G+ P+S++F ++LSACSH GL++E
Sbjct: 305 EVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEE 364
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G FD M ++Y I P +EHYGCM+D+LGR GL+EEA +I +M EP+ VI RS L AC
Sbjct: 365 GIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSAC 424
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
G L + GK ++K EP YVL ++ + S W A E+ + + K P
Sbjct: 425 LVRGNN-RLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKP 483
Query: 442 GCSWVKVNDGSAEE 455
GCSW+++ DG+ E
Sbjct: 484 GCSWIEI-DGAVHE 496
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 123 VHSLIFKVGLDS-DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H+L GL + + + R YA + A+ +F+E+P D++S++S+++ + D
Sbjct: 33 IHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLMSLHLQLD 92
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ +A+ +F R+ A P+ +V +SA + + G ++H GL+ +V +G
Sbjct: 93 NQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGN 152
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKN-------------------------------LQS 270
AL++MYS+CG E A KVF+ M K+ + +
Sbjct: 153 ALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVA 212
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFD 327
WT +I+G + A+ LF +M+ G +P ++ +LSAC+ +G +D G+ Y
Sbjct: 213 WTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLGRVIHGYGS 272
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+ NI + ++DM ++G IE A+ + + + ++ +
Sbjct: 273 KCNASLNIIVS----NALMDMYAKSGHIEMAFSVFQEVQSKDS 311
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 262/470 (55%), Gaps = 41/470 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L Q H + T L+ + +++FI S + L + S+F + P P + +NT+IRA +
Sbjct: 31 LKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPF-PNTYLHNTMIRALS 89
Query: 78 ----KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
+ + SI +I ++ + +PD FT+PFV+K R + G VH G D
Sbjct: 90 LVDERNAHSI-AITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFD 148
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV-------------------------- 167
S ++ L++MY++C + A+ VF+EM VRDV
Sbjct: 149 SSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMM 208
Query: 168 -------VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
VSW+ +I+G+ S+A++VF RM + N P+ VTL++++SAC L ++
Sbjct: 209 PCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLEL 268
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
GE I SY G+ V+L A+++MY+K G++ KA +VF + E+N+ +WT +I+GLA
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLAT 328
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G G A+ +F +M++ G+KP+ ++F AILSACSH+G VD G +F+ M Y I P +E
Sbjct: 329 HGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIE 388
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGCM+D+LGRAG + EA +I++MP E NA I S L A H + + L + L+K
Sbjct: 389 HYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQ-LIK 447
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
LEP NY+L A++ S G WD + + + G+ K+ G S ++V +
Sbjct: 448 LEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVEN 497
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 249/442 (56%), Gaps = 8/442 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
LI L + VH + + F + NT + + S L +++F + + +
Sbjct: 160 LISLGRAVHSI-GVKACFSREDRFCNTLLD----MYSKCGDLDSAKAVFREMS-DRSVVS 213
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y ++I YA+ + E++KLF+EM + G+ PD +T V+ C R L+ G VH I
Sbjct: 214 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 273
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ L D ++ N L+ MYA C + A+ VF EM V+D++SW+++I G+ ++AL
Sbjct: 274 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 333
Query: 189 VFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F+ + + SP+ T+ ++ AC SL G IH Y + NG D + +LV+MY
Sbjct: 334 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 393
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG + A +F+ + K+L SWT+MI+G +G G AI+LF +M Q G++ D ISF
Sbjct: 394 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 453
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L ACSH GLVDEG +F+ M I+PT+EHY C+VDML R G + +AY I NMP
Sbjct: 454 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 513
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A I + L CR H V L + + + + +LEPE YVL A++ + + W+
Sbjct: 514 PPDATIWGALLCGCRIHHDV-KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 572
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
L I Q+GL K PGCSW+++
Sbjct: 573 LRKRIGQRGLRKNPGCSWIEIK 594
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 166/313 (53%), Gaps = 3/313 (0%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTL 72
++VH QLH LK+ + + + L + + R +F+ + + ++N++
Sbjct: 58 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSI 116
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I Y + + + +F +ML +G+ D T V C LI +G +VHS+ K
Sbjct: 117 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ NTLL MY+ C ++D AKAVF EM R VVS++SMIAG+ +A+K+F
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ SP+ T+ ++++ C + G+ +H + N L D+ + AL++MY+KCG
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILS 311
+++A VF+ MR K++ SW +I G + N N A+SLF +++ PD + + +L
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 312 ACSHLGLVDEGKN 324
AC+ L D+G+
Sbjct: 357 ACASLSAFDKGRE 369
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 162/309 (52%), Gaps = 2/309 (0%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + + LF +N L+ AK+ SI LF +M+ +G+ D++T+ V K+
Sbjct: 1 FDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 59
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ G +H I K G +GN+L+ Y + +D A+ VF+EM RDV+SW+S+I G
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+V+ L VF +M ++ + T+VS+ + C + G ++HS V +
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
L++MYSKCG ++ A VF M ++++ S+T MI+G A G A+ LF +M +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+ PD + +A+L+ C+ L+DEGK E + ++ + ++DM + G ++
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 357 EAYHIIRNM 365
EA + M
Sbjct: 299 EAELVFSEM 307
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 235/382 (61%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I Y+ S I+LF M + G+RP T ++ AC R + + +G +H I
Sbjct: 467 SWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYI 526
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ +++D ++ ++L+ +Y C I A+ VF+ MP +VVSW+ MI+G+V S +AL
Sbjct: 527 IRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEAL 586
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ A P+++T S++ AC+ L + G+ IH++ + + LE++ + AL++MY
Sbjct: 587 VIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMY 646
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V++A +FN + E++ SWT MI+ +G+ A+ LF KM Q+ KPD ++F
Sbjct: 647 AKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFL 706
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP- 366
AILSACSH GLVDEG YF++M Y KP +EHY C++D+LGR G + EAY I++ P
Sbjct: 707 AILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ +L + AC H + L L + +G+LL++ +P+ + Y++ +++ + WD
Sbjct: 767 IREDVGLLSTLFSACHLHKK-LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVR 825
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
++ + I + GL K PGCSW++V
Sbjct: 826 KVRLKIKELGLKKNPGCSWIEV 847
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 192/337 (56%), Gaps = 11/337 (3%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P + ++N +I Y + ++++LF+EM +G +PD+ T V+ +C R L
Sbjct: 355 LFDEMP-ERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + + G D ++ + L+ MY C +++AK VFE++ ++VVSW+SMIA
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ +++F RM P TL S++ AC+ +N++ G+ IH Y + N +E
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA 533
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ + ++L+++Y KCG++ A VF M + N+ SW +MISG G A+ +F M
Sbjct: 534 DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 593
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDMLGR 351
+ G+KPD+I+F+++L ACS L ++++GK + + I+ +E G ++DM +
Sbjct: 594 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAK 648
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
G ++EA HI +P E + V S + A +HGQ
Sbjct: 649 CGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQAF 684
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 187/349 (53%), Gaps = 7/349 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRS---LFNNLPVTPPLFAYNTLIRAYAK 78
+H + L +N + I +L S H +S +F + + +N L+ A K
Sbjct: 217 IHQKIVSLGLQNNITLCKSLI--NLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274
Query: 79 TSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
IE +++F +L L+PD FTYP V+KAC +G G VH+ + K G D
Sbjct: 275 NFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVV 334
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ ++ + MYA C + A +F+EMP RDV SW+++I+ + P AL++F MK++
Sbjct: 335 VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSG 394
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+SVTL +++S+C L+++ G+ IH V +G LD + +ALV+MY KCG +E A
Sbjct: 395 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF ++ KN+ SW MI+G + G I LF +M + G++P + S+IL ACS
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ GK + R ++ + ++D+ + G I A ++ +NMP
Sbjct: 515 NLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 137/251 (54%), Gaps = 7/251 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE--EMPVRDVVSWSSMIAG 176
+G +H I +GL ++ + +L+ +Y +C AK VF+ E P+ D+ W+ ++A
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAA 271
Query: 177 FVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ L+VFHR + P++ T S++ AC+ L V G+ +H++ + +G +
Sbjct: 272 CTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM 331
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV + ++ V MY+KC E A K+F+ M E+++ SW +IS +G+ A+ LF +M
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGL 354
+G KPDS++ + ++S+C+ L ++ GK E+ R + + + +VDM G+ G
Sbjct: 392 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGC 449
Query: 355 IEEAYHIIRNM 365
+E A + +
Sbjct: 450 LEMAKEVFEQI 460
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 257/460 (55%), Gaps = 34/460 (7%)
Query: 27 LKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIES 85
+K D N + FI + SL + R +F+ + + +N ++ Y + +S
Sbjct: 134 VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFD-MGDAWEVVTWNIMLSGYNRVKQFKKS 192
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
LF EM K G+ P++ T ++ AC + + G ++ I ++ + + N L+ M
Sbjct: 193 KMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDM 252
Query: 146 YAACKEIDVAKAVFEEM-------------------------------PVRDVVSWSSMI 174
+AAC E+D A++VF+ M P RD VSW++MI
Sbjct: 253 FAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMI 312
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G++ + +AL +F M+++N P+ T+VS+++AC L + GE + +Y N ++
Sbjct: 313 DGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK 372
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D +G AL++MY KCG+V KA KVF M K+ +WT MI GLA NG G A+++F+ M
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM 432
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
I+ + PD I++ +L AC+H G+V++G+++F M + IKP + HYGCMVD+LGRAG
Sbjct: 433 IEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGR 492
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+EEA+ +I NMP +PN+++ S LGACR H V L + K +L+LEPE GA YVL +
Sbjct: 493 LEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNV-QLAEMAAKQILELEPENGAVYVLLCN 551
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ + W+ ++ + ++G+ K PGCS +++N E
Sbjct: 552 IYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYE 591
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 209/397 (52%), Gaps = 46/397 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ K+++ L Q+H+ +K L + R F S + + R +F+ +P P
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP-QP 70
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF +NT+I+ Y++ + + ++ ML + ++PD FT+PF++K R + + G +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K G DS+ ++ + M++ C+ +D+A+ VF+ +VV+W+ M++G+
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG--LELDVALGTA 242
+ +F M+ SPNSVTLV ++SAC+ L ++ G+ I+ Y +NG +E ++ L
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY--INGGIVERNLILENV 248
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY---------------- 286
L++M++ CG +++A VF+ M+ +++ SWT +++G A+ G+ +
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308
Query: 287 ---------------AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDE 328
A++LF +M + +KPD + +IL+AC+HLG ++ G K Y D+
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ IK ++DM + G + +A + + M
Sbjct: 369 NS----IKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 261/435 (60%), Gaps = 7/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+ ++ L + C+ + + + S+ +R +F +P + ++ +I AY
Sbjct: 72 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAY 130
Query: 77 AKT-SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
A++ C E+I+LF +M+ +RP++F++ V+KACG G V+S K+G+ S
Sbjct: 131 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 190
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN+L+ MYA ++ A+ F+ + +++VS+++++ G+ +A +F+ +
Sbjct: 191 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 250
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
++ T SL+S S+ + GE IH + G + + + AL+ MYS+CG++E
Sbjct: 251 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 310
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF+VFN M ++N+ SWT MI+G A +G A+ +F KM++TG KP+ I++ A+LSACSH
Sbjct: 311 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 370
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+G++ EG+ +F+ M + + I P MEHY CMVD+LGR+GL+ EA I +MP +A++ R
Sbjct: 371 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 430
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR HG L + +++L+ EP+ A Y+L +++ + +G W ++ ++ ++
Sbjct: 431 TLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 489
Query: 436 GLNKVPGCSWVKVND 450
L K GCSW++V +
Sbjct: 490 NLIKEAGCSWIEVEN 504
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 180/336 (53%), Gaps = 11/336 (3%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L + +I +A+ C+ ++I LF +M +G PD FTY V+ AC
Sbjct: 7 VFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---EIDVAKAVFEEMPVRDVVSWSS 172
L+ +G +HS + ++GL D +G +L+ MYA C +D ++ VFE+MP +V+SW++
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 173 MIAGFVA---CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
+I + CD +A+++F +M + PN + S++ AC +L + GE ++SYAV
Sbjct: 126 IITAYAQSGECD--KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G+ +G +L+ MY++ G +E A K F+++ EKNL S+ ++ G A N + A
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF ++ TG+ + +F+++LS + +G + +G+ + + K ++ M
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMY 302
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
R G IE A+ + M + N + S + HG
Sbjct: 303 SRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 337
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VF++MP R++V+W+ MI F DA+ +F M+L+ P+ T S++SACT
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC---GHVEKAFKVFNLMREKNLQSW 271
L + G+ +HS + GL LDV +G +LV+MY+KC G V+ + KVF M E N+ SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 272 TIMISGLADNGRGNY-AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
T +I+ A +G + AI LF KMI ++P+ SFS++L AC +L Y E
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQV 178
Query: 331 RVYNIKPTMEHYGC----MVDMLGRAGLIEEA 358
Y +K + C ++ M R+G +E+A
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDA 210
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 235/406 (57%), Gaps = 25/406 (6%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I YA+ +++ LF EM+K GL P+ T V+ AC C S+H
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+G D+Y+ N L+ MY+ ++D+++ +F+ M VRD VSW++MI G+V S+AL
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNAL 486
Query: 188 KVFHRMKLANES-----------------PNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+ H M+ + PN++TL++++ C +L + G+ IH+YA+
Sbjct: 487 VLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR 546
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
N L D+ +G+ALV+MY+KCG + + +VFN M KN+ +W ++I +G+G A+ L
Sbjct: 547 NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALEL 606
Query: 291 FAKMIQTG-----LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
F M+ KP+ ++F + +ACSH GL+ EG N F M + ++PT +HY C+
Sbjct: 607 FKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV 666
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
VD+LGRAG +EEAY ++ MP E + V S LGACR H Q + L + K LL LEP
Sbjct: 667 VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH-QNVELGEVAAKNLLHLEPN 725
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ ++YVL +++ S +G W+ A E+ + Q G+ K PGCSW++ D
Sbjct: 726 VASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 771
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 138/255 (54%), Gaps = 5/255 (1%)
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+R+ +++ E+I + EM +G RPDNF +P V+KA + G +H+ K G
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 133 DSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
S + NTL+ MY C I VF+ + RD VSW+S IA + AL+ F
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFR 183
Query: 192 RMKLANESPNSVTLVSLVSACTSL---INVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
M++ N +S TLVS+ AC++L +R G+ +H Y++ G + AL+ MY+
Sbjct: 184 AMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYA 242
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G V+ + +F ++++ SW MIS + + R + A++ F M+ G++ D ++ ++
Sbjct: 243 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 302
Query: 309 ILSACSHLGLVDEGK 323
+L ACSHL +D GK
Sbjct: 303 VLPACSHLERLDVGK 317
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC---GRCLLIGIGGSVH 124
++N+ I A + ++++ F M + +FT V AC G + +G +H
Sbjct: 161 SWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLH 220
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+VG D + N L+ MYA +D +KA+FE RD+VSW++MI+ F D S
Sbjct: 221 GYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFS 279
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTAL 243
+AL F M L + VT+ S++ AC+ L + G+ IH+Y + N L + +G+AL
Sbjct: 280 EALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSAL 339
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPD 302
V+MY C VE +VF+ + + ++ W MISG A NG A+ LF +MI+ GL P+
Sbjct: 340 VDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 399
Query: 303 SISFSAILSACSH 315
+ + ++++ AC H
Sbjct: 400 TTTMASVMPACVH 412
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 173/357 (48%), Gaps = 30/357 (8%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+++LF + V + ++NT+I +++++ E++ F M+ G+ D T V+ AC
Sbjct: 250 SKALFESF-VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACS 308
Query: 113 RCLLIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ +G +H+ + + L + ++G+ L+ MY C++++ + VF+ + R + W+
Sbjct: 309 HLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 368
Query: 172 SMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+MI+G+ AL +F M K+A PN+ T+ S++ AC ESIH YAV
Sbjct: 369 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK 428
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G + D + AL++MYS+ G ++ + +F+ M ++ SW MI+G +GR + A+ L
Sbjct: 429 LGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVL 488
Query: 291 FAKMIQT-----------------GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+M + KP++I+ +L C+ L + +GK Y
Sbjct: 489 LHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI-----HAY 543
Query: 334 NIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
I+ + +VDM + G + + + MP + N + + AC HG+
Sbjct: 544 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGK 599
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P R SW + + +A+ + M ++ P++ +++ A + L +++ GE
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 223 SIHSYAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
IH+ AV G V + LV MY KCG + KVF+ + +++ SW I+ L
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ A+ F M ++ S + ++ ACS+LG++
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 265/465 (56%), Gaps = 12/465 (2%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E +++ V L Q+H + T + ++++ I + S ++ +T LF ++P+ P
Sbjct: 13 EAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPL-PD 71
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +N++I++ +K + + + ML + + P N+T+ V+K+C + IG VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
G D Y+ L+ Y+ C +++ A+ VF+ MP + +V+W+S+++GF +
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++VF++M+ + P+S T VSL+SAC V G +H Y + GL+L+V LGTAL+
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSI 304
+YS+CG V KA +VF+ M+E N+ +WT MIS +G G A+ LF KM G P+++
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F A+LSAC+H GLV+EG++ + M + Y + P +EH+ CMVDMLGRAG ++EAY I
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 365 MPTEPNAV---ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ A + + LGAC+ H + L + K L+ LEP+ ++V+ +++ +LSG
Sbjct: 372 LDATGKATAPALWTAMLGACKMH-RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGK 430
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGS-----AEEMSKETA 461
D + + + + L K G S ++V + + +E +ET
Sbjct: 431 TDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETG 475
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 250/458 (54%), Gaps = 19/458 (4%)
Query: 3 SRHIETLIQLSKTVHHLH-----QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSL 56
SRH T L K V L Q H +K LD + + + I S L F L
Sbjct: 103 SRH--TFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + + +I + + + E++ F EM KTG+ + T V+KA G+
Sbjct: 161 FDGAE-DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 117 IGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G SVH L + G + D +IG++L+ MY C D A+ VF+EMP R+VV+W+++IA
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V + VF M ++ +PN TL S++SAC + + G +H Y + N +E+
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ GT L+++Y KCG +E+A VF + EKN+ +WT MI+G A +G A LF M+
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + P+ ++F A+LSAC+H GLV+EG+ F M +N++P +HY CMVD+ GR GL+
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
EEA +I MP EP V+ + G+C +L+ D LGK ++KL+P Y L
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSC-----LLHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ S S NWD A + + + + K PG SW++V
Sbjct: 515 LANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 199/391 (50%), Gaps = 19/391 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSL--DHNTCIISRFILTSLSISLHF--TRSLFNNLP 61
++TL+ L HL Q+H L L + + +SR + + + F R L L
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQ 63
Query: 62 VTPPLFAYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
T + +++LI ++ T S + M + G+ P T+P ++KA + L
Sbjct: 64 -TLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK-LRDSN 121
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
H+ I K GLDSD ++ N+L+ Y++ D A +F+ +DVV+W++MI GFV
Sbjct: 122 PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVA 238
S S+A+ F MK + N +T+VS++ A + +VR G S+H + G ++ DV
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G++LV+MY KC + A KVF+ M +N+ +WT +I+G + + + +F +M+++
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDMLGRAGL 354
+ P+ + S++LSAC+H+G + G+ Y IK ++E ++D+ + G
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRR-----VHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+EEA + + E N + + HG
Sbjct: 357 LEEAILVFERL-HEKNVYTWTAMINGFAAHG 386
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 249/464 (53%), Gaps = 42/464 (9%)
Query: 22 LHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+H +T L + ++ RF S L + ++F+ +P P F YNTLIRA++
Sbjct: 26 IHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMP-QPTTFFYNTLIRAHSH 84
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++ S F+ M + + PD F++ F++K+ R + + +H +FK G ++
Sbjct: 85 STTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS--RSFTMPLVHDIHGAVFKFGFCRHLHV 142
Query: 139 GNTLLRMYAA-----------------------------------CKEIDVAKAVFEEMP 163
N L+ +YA E+DVA+ VF+ MP
Sbjct: 143 QNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMP 202
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDVVSW+ M++ + P + L +F M+LA P+ VT++S++SAC L + G
Sbjct: 203 ERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRM 262
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H + NG VAL +L++MY KCG +E+A++VF+ + K+L +W M+ A++G
Sbjct: 263 VHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGY 322
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A LF MI +G+ PD ++ A+L A +H G VDEG F+ M R Y ++P +EHYG
Sbjct: 323 AEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYG 382
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
+VDMLGR+G ++EAY+++ +MP N VI + LGACR HG V + + + K LL+L+P
Sbjct: 383 AVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDV-GMGERVIKKLLELKP 441
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ G Y+L + +G A E+ A+ G K PGCSWV+
Sbjct: 442 DEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 255/471 (54%), Gaps = 39/471 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L Q+H +KT L +T SR F S S +++ +F + P F +NT
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNP-FVWNT 94
Query: 72 LIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+IR ++++S +I +F +ML ++P TYP V KA GR G +H ++ K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 130 VGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAV 158
GL+ D +I NT+L MY A C ID A+ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+EMP R+ VSW+SMI+GFV DAL +F M+ + P+ T+VSL++AC L
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G IH Y V N EL+ + TAL++MY KCG +E+ VF +K L W MI GL
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A+NG A+ LF+++ ++GL+PDS+SF +L+AC+H G V +F M Y I+P+
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
++HY MV++LG AGL+EEA +I+NMP E + VI S L ACR G V + K L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV-EMAKRAAKCL 453
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
KL+P+ YVL ++ + G ++ A E + + ++ + K GCS ++V+
Sbjct: 454 KKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 213 TSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
T +R + IH+ + GL D V L + + A+ VF + KN W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 272 TIMISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDEGKNYF--- 326
+I G + + AIS+F M+ +KP +++ ++ A LG +G+
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 327 --DEMARVYNIKPTMEHY----GCMVD-------MLG--------------RAGLIEEAY 359
+ + I+ TM H GC+++ M+G + GLI++A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 360 HIIRNMPTEPNAVILRSFL-GACRN 383
++ MP + N V S + G RN
Sbjct: 213 NLFDEMP-QRNGVSWNSMISGFVRN 236
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 261/435 (60%), Gaps = 7/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+ ++ L + C+ + + + S+ +R +F +P + ++ +I AY
Sbjct: 77 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAY 135
Query: 77 AKT-SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
A++ C E+I+LF +M+ +RP++F++ V+KACG G V+S K+G+ S
Sbjct: 136 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 195
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN+L+ MYA ++ A+ F+ + +++VS+++++ G+ +A +F+ +
Sbjct: 196 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 255
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
++ T SL+S S+ + GE IH + G + + + AL+ MYS+CG++E
Sbjct: 256 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 315
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF+VFN M ++N+ SWT MI+G A +G A+ +F KM++TG KP+ I++ A+LSACSH
Sbjct: 316 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 375
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+G++ EG+ +F+ M + + I P MEHY CMVD+LGR+GL+ EA I +MP +A++ R
Sbjct: 376 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 435
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR HG L + +++L+ EP+ A Y+L +++ + +G W ++ ++ ++
Sbjct: 436 TLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 494
Query: 436 GLNKVPGCSWVKVND 450
L K GCSW++V +
Sbjct: 495 NLIKEAGCSWIEVEN 509
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 180/336 (53%), Gaps = 11/336 (3%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L + +I +A+ C+ ++I LF +M +G PD FTY V+ AC
Sbjct: 12 VFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---EIDVAKAVFEEMPVRDVVSWSS 172
L+ +G +HS + ++GL D +G +L+ MYA C +D ++ VFE+MP +V+SW++
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 173 MIAGFVA---CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
+I + CD +A+++F +M + PN + S++ AC +L + GE ++SYAV
Sbjct: 131 IITAYAQSGECD--KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G+ +G +L+ MY++ G +E A K F+++ EKNL S+ ++ G A N + A
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF ++ TG+ + +F+++LS + +G + +G+ + + K ++ M
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMY 307
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
R G IE A+ + M + N + S + HG
Sbjct: 308 SRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 342
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VF++MP R++V+W+ MI F DA+ +F M+L+ P+ T S++SACT
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC---GHVEKAFKVFNLMREKNLQSW 271
L + G+ +HS + GL LDV +G +LV+MY+KC G V+ + KVF M E N+ SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 272 TIMISGLADNGRGNY-AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
T +I+ A +G + AI LF KMI ++P+ SFS++L AC +L Y E
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQV 183
Query: 331 RVYNIKPTMEHYGC----MVDMLGRAGLIEEA 358
Y +K + C ++ M R+G +E+A
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDA 215
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 262/471 (55%), Gaps = 37/471 (7%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-----------------LTSLSISLHFT--- 53
+ H Q+H LK L+HN + + I +S+ ++ FT
Sbjct: 142 RGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALI 201
Query: 54 ------------RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
R LF+ +PV + ++N +I YA++ E++ F+EM + + P+
Sbjct: 202 TGYASKGFLDEARELFDEIPVRD-VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260
Query: 102 FTYPFVVKACGRC-LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
T V+ AC + + +G V S I GL S+ + N L+ MY C +++ A +FE
Sbjct: 261 STMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
++ ++VVSW+ MI G+ +AL +F RM +N PN VT +S++ AC +L +
Sbjct: 321 KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDL 380
Query: 221 GESIHSYAVVN--GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ +H+Y N ++ VAL T+L++MY+KCG + A ++F+ M K+L +W MISG
Sbjct: 381 GKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGF 440
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G + A+ LF++M G PD I+F +L+AC H GL+ G+ YF M + Y + P
Sbjct: 441 AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPK 500
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+ HYGCM+D+ GRAGL +EA +++NM +P+ I S LGACR H ++ L +++ K L
Sbjct: 501 LPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRI-ELAESVAKHL 559
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+LEPE + YVL +++ + +G W+ A++ +N + KVPGCS ++V+
Sbjct: 560 FELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVD 610
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 208/400 (52%), Gaps = 43/400 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH----FTRSLFNNLPVT 63
TL+ KT+ L Q+H+ +KT L HNT ++ ++S H + SLF +
Sbjct: 33 TLLSNCKTLQTLKQIHSQIIKTGL-HNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR-N 90
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P +N +IR + + +++ + M+ +G P+ +T+P + K+C + G V
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------I 152
H+ + K+GL+ + ++ +L+ MYA E +
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
D A+ +F+E+PVRDVVSW++MI+G+ +A+ F M+ A +PN T++S++SAC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 213 T-SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
S +++ G + S+ GL ++ L L++MY KCG +E+A +F +++KN+ SW
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSW 330
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDE 328
+MI G A+ LF +M+Q+ + P+ ++F +IL AC++LG +D GK Y D+
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDK 390
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ ++K T+ + ++DM + G + A I M T+
Sbjct: 391 NMK--SMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK 428
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 263/445 (59%), Gaps = 17/445 (3%)
Query: 21 QLHTLFLKT-SLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH LK SLD N+ + S + + + R +F+ + + +N +I Y++
Sbjct: 236 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQ 294
Query: 79 TSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E++ LF M ++ GL ++ T VV AC R ++H + K GLD D++
Sbjct: 295 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 354
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK--- 194
+ NTL+ MY+ +ID+A +F +M RD+V+W++MI G+V + DAL + H+M+
Sbjct: 355 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414
Query: 195 --------LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ PNS+TL++++ +C +L + G+ IH+YA+ N L DVA+G+ALV+M
Sbjct: 415 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 474
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++ + KVF+ + +KN+ +W ++I +G G AI L M+ G+KP+ ++F
Sbjct: 475 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 534
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ +ACSH G+VDEG F M Y ++P+ +HY C+VD+LGRAG I+EAY ++ MP
Sbjct: 535 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 594
Query: 367 TEPN-AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+ N A S LGA R H L + + + L++LEP + ++YVL A++ S +G WD A
Sbjct: 595 RDFNKAGAWSSLLGASRIHNN-LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 653
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
E+ + ++G+ K PGCSW++ D
Sbjct: 654 TEVRRNMKEQGVRKEPGCSWIEHGD 678
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +NT++ + + +E+++ EM+ G+ PD FT V+ AC ++ G +H+
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
K G LD + ++G+ L+ MY CK++ + VF+ M R + W++MIAG+ +
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL +F M+ A NS T+ +V AC E+IH + V GL+ D + L
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ A ++F M +++L +W MI+G + A+ L KM
Sbjct: 360 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 419
Query: 296 ---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ LKP+SI+ IL +C+ L + +GK A N+ + +VDM +
Sbjct: 420 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 478
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
G ++ + + +P + N + + A HG
Sbjct: 479 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHG 510
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 129/236 (54%), Gaps = 5/236 (2%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY-IGNTLLRMYAACK 150
M+ G++PDN+ +P ++KA + +G +H+ ++K G D + NTL+ +Y C
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
+ VF+ + R+ VSW+S+I+ + + AL+ F M N P+S TLVS+V+
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 211 ACTSLI---NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
AC++L + G+ +H+Y + G EL+ + LV MY K G + + + ++
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
L +W ++S L N + A+ +M+ G++PD + S++L ACSHL ++ GK
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 68 AYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIG 120
++N+LI + CS E +++ F ML + P +FT VV AC + + +G
Sbjct: 79 SWNSLISSL----CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 134
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ + G + + +I NTL+ MY ++ +K + RD+V+W+++++
Sbjct: 135 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 193
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
+ +AL+ M L P+ T+ S++ AC+ L +R G+ +H+YA+ NG L+ + +
Sbjct: 194 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 253
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
G+ALV+MY C V +VF+ M ++ + W MI+G + N A+ LF M ++ G
Sbjct: 254 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 313
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
L +S + + ++ AC V G E + +K ++ ++DM R G
Sbjct: 314 LLANSTTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 368
Query: 355 IEEAYHIIRNM 365
I+ A I M
Sbjct: 369 IDIAMRIFGKM 379
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 253/478 (52%), Gaps = 40/478 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T++H QLH + +L ++ +I+ RFI T I +H L + +P F Y+
Sbjct: 23 TLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSA 82
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIRAYA+ SI+L+ ML + P +FT+ + L G +H F G
Sbjct: 83 LIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL---GSQLHLHAFLFG 139
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS-------------------- 171
+D Y+GNT++ MY +D A+ VF+EMP RDVV+W+
Sbjct: 140 FVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFV 199
Query: 172 -----------SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
SM+ G+ P AL+ F +M+ A + +TLV +SAC L
Sbjct: 200 GLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGY 259
Query: 221 GESIHSYAVVN--GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ I A + G +V +G+AL++MYSKCG+VE+A+ VF M+E N+ S++ MI G
Sbjct: 260 ADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGF 319
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +GR AI LF +M++ G+KP+ ++F + +ACSH G+V++G+ F M Y + PT
Sbjct: 320 AVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPT 379
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+HY CM D+LGRAG +E+A +++ MP EPN + + LGA HG + + + L
Sbjct: 380 ADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNP-DVAEIASRSL 438
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+LEP+ NY+L + +L+ WD + + + +K L K PGCSWV+ +G E
Sbjct: 439 FELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEF 496
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV---AKAVFEEMPVRDVVSW 170
C + +H+ I++ L Y+ LLR I V +F ++ + +
Sbjct: 21 CTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
S++I + +++++ M N SP S T +L S L N G +H +A +
Sbjct: 81 SALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKNPSLGSQLHLHAFL 137
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE------------------------- 265
G D+ +G ++ MY K G ++ A KVF+ M
Sbjct: 138 FGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACEL 197
Query: 266 ------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
K++ +WT M++G + N A+ F KM + G+ D I+ +SAC+ LG V
Sbjct: 198 FVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLG-V 256
Query: 320 DEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
++ E+A + ++DM + G +EEAY++ + M E N S
Sbjct: 257 SGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGM-KEMNVFSYSSM 315
Query: 378 LGACRNHGQ 386
+ HG+
Sbjct: 316 IVGFAVHGR 324
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 263/445 (59%), Gaps = 17/445 (3%)
Query: 21 QLHTLFLKT-SLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH LK SLD N+ + S + + + R +F+ + + +N +I Y++
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQ 381
Query: 79 TSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E++ LF M ++ GL ++ T VV AC R ++H + K GLD D++
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK--- 194
+ NTL+ MY+ +ID+A +F +M RD+V+W++MI G+V + DAL + H+M+
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 195 --------LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ PNS+TL++++ +C +L + G+ IH+YA+ N L DVA+G+ALV+M
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 561
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++ + KVF+ + +KN+ +W ++I +G G AI L M+ G+KP+ ++F
Sbjct: 562 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 621
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ +ACSH G+VDEG F M Y ++P+ +HY C+VD+LGRAG I+EAY ++ MP
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 367 TEPN-AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+ N A S LGA R H L + + + L++LEP + ++YVL A++ S +G WD A
Sbjct: 682 RDFNKAGAWSSLLGASRIHNN-LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
E+ + ++G+ K PGCSW++ D
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGD 765
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +NT++ + + +E+++ EM+ G+ PD FT V+ AC ++ G +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
K G LD + ++G+ L+ MY CK++ + VF+ M R + W++MIAG+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL +F M+ A NS T+ +V AC E+IH + V GL+ D + L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ A ++F M +++L +W MI+G + A+ L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 296 ---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ LKP+SI+ IL +C+ L + +GK A N+ + +VDM +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
G ++ + + +P + N + + A HG
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHG 597
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
L+R+ +++ E++ + +M+ G++PDN+ +P ++KA + +G +H+ ++K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 132 LDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
D + NTL+ +Y C + VF+ + R+ VSW+S+I+ + + AL+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 191 HRMKLANESPNSVTLVSLVSACTSLI---NVRAGESIHSYAVVNGLELDVALGTALVEMY 247
M N P+S TLVS+V+AC++L + G+ +H+Y + G EL+ + LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G + + + ++L +W ++S L N + A+ +M+ G++PD + S
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 308 AILSACSHLGLVDEGK 323
++L ACSHL ++ GK
Sbjct: 307 SVLPACSHLEMLRTGK 322
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 68 AYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIG 120
++N+LI + CS E +++ F ML + P +FT VV AC + + +G
Sbjct: 166 SWNSLISSL----CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ + G + + +I NTL+ MY ++ +K + RD+V+W+++++
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
+ +AL+ M L P+ T+ S++ AC+ L +R G+ +H+YA+ NG L+ + +
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
G+ALV+MY C V +VF+ M ++ + W MI+G + N A+ LF M ++ G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
L +S + + ++ AC V G E + +K ++ ++DM R G
Sbjct: 401 LLANSTTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 355 IEEAYHIIRNM 365
I+ A I M
Sbjct: 456 IDIAMRIFGKM 466
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPV-----RDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
LLR DVA AV + R W ++ V + +A+ + M +
Sbjct: 32 LLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL 91
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEK 255
P++ +L+ A L ++ G+ IH++ G +D V + LV +Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+KVF+ + E+N SW +IS L + A+ F M+ ++P S + ++++ACS+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 316 L 316
L
Sbjct: 212 L 212
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 248/444 (55%), Gaps = 13/444 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI------SLHFTRSLFNNLPVTPPL 66
S +++ ++H +K D +S F+ +L+ L + +LF + + +
Sbjct: 230 SGALNYGREIHAQAMKKGFD-----VSSFVANTLATMYNKCGKLEYGLTLFEKMSMRD-V 283
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++ T+I + +++ F M ++ + P+ +T+ V+ C I G +H+L
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I +GL + + N+++ MYA C ++ + +F EM RD+VSWS++IAG+ S+A
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEA 403
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
++ M++ P L S++SAC ++ + G+ +H+Y + GLE + +AL+ M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG +E+A ++F+ ++ SWT MI+G A++G I LF K+ + GL+PDS++F
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GLVD G YF+ M++ Y I P+ EHYGCM+D+L RAG + +A H+I MP
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ V+ + L ACR HG V + +L+LEP ++ A++ + G W AA
Sbjct: 584 FHRDDVVWSTLLRACRVHGDV-ERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642
Query: 427 ELMVAINQKGLNKVPGCSWVKVND 450
++ + KG+ K PG SW+KV D
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKD 666
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 186/356 (52%), Gaps = 11/356 (3%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
L+ V++ LH +KT L ++ + S + + + + + R +F+ +P+ + ++
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN-VVSWT 186
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I + + E++ F EM ++ + D++T+ +KAC + G +H+ K
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D ++ NTL MY C +++ +FE+M +RDVVSW+++I V A++ F
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ ++ SPN T +++S C +L + GE +H+ + GL +++ +++ MY+KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + + +F+ M +++ SW+ +I+G + G + A L + M G KP + +++L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG----CMVDMLGRAGLIEEAYHII 362
SAC ++ +++ GK Y + +EH +++M + G IEEA I
Sbjct: 427 SACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R +F+ + + ++ TLI Y + S E++ LF M +++GLR D F KACG
Sbjct: 69 RRMFDKMSQKDEI-SWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G +H K GL + ++G+ LL MY +I + VF EMP+R+VVSW++
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G V +AL F M + +S T + AC + G IH+ A+ G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
++ + L MY+KCG +E +F M +++ SWT +I+ L G+ A+ F
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+M ++ + P+ +F+A++S C++L ++ G+
Sbjct: 308 RMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 236/396 (59%), Gaps = 2/396 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ +LI AY + ++I+LF EM G+ PD ++ V+ AC + G VH+
Sbjct: 720 VVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN 779
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K + + N L+ MYA C ++ A VF ++PV+D+VSW++MI G+ P++
Sbjct: 780 YIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNE 839
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
ALK+F M+ P+ +T+ L+ AC SL + G IH + NG ++ + AL++
Sbjct: 840 ALKLFAEMQ-KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALID 898
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KCG + A +F+++ EK+L +WT+MISG +G GN AI+ F KM G+KPD I+
Sbjct: 899 MYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEIT 958
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F++IL ACSH GL++EG +F+ M N++P +EHY CMVD+L R G + +AY++I M
Sbjct: 959 FTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETM 1018
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P+A I + L CR H V L + + + + +LEP+ YVL A++ + + W+
Sbjct: 1019 PIKPDATIWGALLCGCRIHHDV-ELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEV 1077
Query: 426 AELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+L I ++GL K PGCSW++V +S +TA
Sbjct: 1078 KKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTA 1113
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 171/320 (53%), Gaps = 1/320 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R +F+++ +F +N ++ YAK ESI LF +M K G+ +++T+ ++
Sbjct: 501 ALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCIL 560
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
K +G +H ++K+G S + N+L+ Y E+D A +F+E+ RDVV
Sbjct: 561 KCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVV 620
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+SMI+G V AL+ F +M + + TLV+ V+AC ++ ++ G ++H
Sbjct: 621 SWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQG 680
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V +V L++MYSKCG++ A + F M +K + SWT +I+ G + AI
Sbjct: 681 VKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAI 740
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M G+ PD S +++L AC+ +D+G++ + + R N+ + ++DM
Sbjct: 741 RLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI-RKNNMALCLPVSNALMDM 799
Query: 349 LGRAGLIEEAYHIIRNMPTE 368
+ G +EEAY + +P +
Sbjct: 800 YAKCGSMEEAYLVFSQIPVK 819
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 178/371 (47%), Gaps = 5/371 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTLIR 74
V ++H K +++ I T S + LF+ L + ++N++I
Sbjct: 569 VGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELG-DRDVVSWNSMIS 627
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
S +++ F +ML + D T V AC + +G ++H K
Sbjct: 628 GCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR 687
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ NTLL MY+ C ++ A FE+M + VVSW+S+IA +V DA+++F+ M+
Sbjct: 688 EVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEME 747
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
SP+ ++ S++ AC ++ G +H+Y N + L + + AL++MY+KCG +E
Sbjct: 748 SKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSME 807
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+A+ VF+ + K++ SW MI G + N N A+ LFA+M Q +PD I+ + +L AC
Sbjct: 808 EAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACG 866
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
L ++ G+ + R + ++DM + G + A ++ +M E + +
Sbjct: 867 SLAALEIGRGIHGCILR-NGYSSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITW 924
Query: 375 RSFLGACRNHG 385
+ C HG
Sbjct: 925 TVMISGCGMHG 935
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 130/288 (45%), Gaps = 4/288 (1%)
Query: 81 CSIESIKLFDEMLKTGLRP--DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
C + ++ E+L+ + D Y +++ C + G VHS+I G+ + +
Sbjct: 429 CEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVL 488
Query: 139 GNTLLRMYAACKEIDVAKAVFEE-MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
G L+ MY +C + + +F+ + V W+ M++ + +++ +F +M+
Sbjct: 489 GAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLG 548
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ NS T ++ +L V + IH G + +L+ Y K G V+ A
Sbjct: 549 ITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAH 608
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
K+F+ + ++++ SW MISG NG + A+ F +M+ + D + ++AC+++G
Sbjct: 609 KLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVG 668
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ G+ + + + M + ++DM + G + +A M
Sbjct: 669 SLSLGRALHGQGVKACFSREVMFN-NTLLDMYSKCGNLNDAIQAFEKM 715
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R LF+ +P L + +I E+I F +M G++PD T+ ++
Sbjct: 905 SLVHARLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963
Query: 109 KACGRCLLIGIG-GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-D 166
AC L+ G G +S+I + ++ ++ + A + A + E MP++ D
Sbjct: 964 YACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPD 1023
Query: 167 VVSWSSMIAG 176
W +++ G
Sbjct: 1024 ATIWGALLCG 1033
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 263/445 (59%), Gaps = 17/445 (3%)
Query: 21 QLHTLFLKT-SLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH LK SLD N+ + S + + + R +F+ + + +N +I Y++
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQ 381
Query: 79 TSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E++ LF M ++ GL ++ T VV AC R ++H + K GLD D++
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK--- 194
+ NTL+ MY+ +ID+A +F +M RD+V+W++MI G+V + DAL + H+M+
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 195 --------LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ PNS+TL++++ +C +L + G+ IH+YA+ N L DVA+G+ALV+M
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 561
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++ + KVF+ + +KN+ +W ++I +G G AI L M+ G+KP+ ++F
Sbjct: 562 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 621
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ +ACSH G+VDEG F M Y ++P+ +HY C+VD+LGRAG I+EAY ++ MP
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 367 TEPN-AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+ N A S LGA R H L + + + L++LEP + ++YVL A++ S +G WD A
Sbjct: 682 RDFNKAGAWSSLLGASRIHNN-LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
E+ + ++G+ K PGCSW++ D
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGD 765
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +NT++ + + +E+++ EM+ G+ PD FT V+ AC ++ G +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
K G LD + ++G+ L+ MY CK++ + VF+ M R + W++MIAG+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL +F M+ A NS T+ +V AC E+IH + V GL+ D + L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ A ++F M +++L +W MI+G + A+ L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 296 ---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ LKP+SI+ IL +C+ L + +GK A N+ + +VDM +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
G ++ + + +P + N + + A HG
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHG 597
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
L+R+ +++ E++ + +M+ G++PDN+ +P ++KA + +G +H+ ++K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 132 LDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
D + NTL+ +Y C + VF+ + R+ VSW+S+I+ + + AL+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 191 HRMKLANESPNSVTLVSLVSACTSLI---NVRAGESIHSYAVVNGLELDVALGTALVEMY 247
M N P+S TLVS+V+AC++L + G+ +H+Y + G EL+ + LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G + + + ++L +W ++S L N + A+ +M+ G++PD + S
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 308 AILSACSHLGLVDEGK 323
++L ACSHL ++ GK
Sbjct: 307 SVLPACSHLEMLRTGK 322
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 68 AYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIG 120
++N+LI + CS E +++ F ML + P +FT VV AC + + +G
Sbjct: 166 SWNSLISSL----CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ + G + + +I NTL+ MY ++ +K + RD+V+W+++++
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
+ +AL+ M L P+ T+ S++ AC+ L +R G+ +H+YA+ NG L+ + +
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
G+ALV+MY C V +VF+ M ++ + W MI+G + N A+ LF M ++ G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
L +S + + ++ AC V G E + +K ++ ++DM R G
Sbjct: 401 LLANSTTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 355 IEEAYHIIRNM 365
I+ A I M
Sbjct: 456 IDIAMRIFGKM 466
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPV-----RDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
LLR DVA AV + R W ++ V + +A+ + M +
Sbjct: 32 LLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL 91
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEK 255
P++ +L+ A L ++ G+ IH++ G +D V + LV +Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+KVF+ + E+N SW +IS L + A+ F M+ ++P S + ++++ACS+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 316 L 316
L
Sbjct: 212 L 212
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 235/382 (61%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I Y+ S I+LF M + G+RP T ++ AC R + + +G +H I
Sbjct: 275 SWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYI 334
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ +++D ++ ++L+ +Y C I A+ VF+ MP +VVSW+ MI+G+V S +AL
Sbjct: 335 IRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEAL 394
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ A P+++T S++ AC+ L + G+ IH++ + + LE++ + AL++MY
Sbjct: 395 VIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMY 454
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V++A +FN + E++ SWT MI+ +G+ A+ LF KM Q+ KPD ++F
Sbjct: 455 AKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFL 514
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP- 366
AILSACSH GLVDEG YF++M Y KP +EHY C++D+LGR G + EAY I++ P
Sbjct: 515 AILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ +L + AC H + L L + +G+LL++ +P+ + Y++ +++ + WD
Sbjct: 575 IREDVGLLSTLFSACHLHKK-LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVR 633
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
++ + I + GL K PGCSW++V
Sbjct: 634 KVRLKIKELGLKKNPGCSWIEV 655
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 192/337 (56%), Gaps = 11/337 (3%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P + ++N +I Y + ++++LF+EM +G +PD+ T V+ +C R L
Sbjct: 163 LFDEMP-ERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 221
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + + G D ++ + L+ MY C +++AK VFE++ ++VVSW+SMIA
Sbjct: 222 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 281
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ +++F RM P TL S++ AC+ +N++ G+ IH Y + N +E
Sbjct: 282 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA 341
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ + ++L+++Y KCG++ A VF M + N+ SW +MISG G A+ +F M
Sbjct: 342 DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 401
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDMLGR 351
+ G+KPD+I+F+++L ACS L ++++GK + + I+ +E G ++DM +
Sbjct: 402 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAK 456
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
G ++EA HI +P E + V S + A +HGQ
Sbjct: 457 CGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQAF 492
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 190/358 (53%), Gaps = 7/358 (1%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRS---LFNNLPVTPPLFAY 69
SK + +H + L +N + I +L S H +S +F + + +
Sbjct: 16 SKYLKQGKLIHQKIVSLGLQNNITLCKSLI--NLYFSCHLFQSAKLVFQTIENPLDITLW 73
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N L+ A K IE +++F +L L+PD FTYP V+KAC +G G VH+ +
Sbjct: 74 NGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVI 133
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D + ++ + MYA C + A +F+EMP RDV SW+++I+ + P AL+
Sbjct: 134 KSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALE 193
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F MK++ P+SVTL +++S+C L+++ G+ IH V +G LD + +ALV+MY
Sbjct: 194 LFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYG 253
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A +VF ++ KN+ SW MI+G + G I LF +M + G++P + S+
Sbjct: 254 KCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSS 313
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
IL ACS + GK + R ++ + ++D+ + G I A ++ +NMP
Sbjct: 314 ILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 370
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 141/263 (53%), Gaps = 7/263 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE--EMPV 164
++K C + G +H I +GL ++ + +L+ +Y +C AK VF+ E P+
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGES 223
D+ W+ ++A + L+VFHR + P++ T S++ AC+ L V G+
Sbjct: 69 -DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H++ + +G +DV + ++ V MY+KC E A K+F+ M E+++ SW +IS +G+
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHY 342
A+ LF +M +G KPDS++ + ++S+C+ L ++ GK E+ R + + +
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS-- 245
Query: 343 GCMVDMLGRAGLIEEAYHIIRNM 365
+VDM G+ G +E A + +
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQI 268
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ L+SL+ C ++ G+ IH V GL+ ++ L +L+ +Y C + A VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 261 NLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGL 318
+ ++ W +++ N + +F +++ LKPD+ ++ ++L ACS LG
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 319 VDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMP 366
V GK M + IK V M + + E+A + MP
Sbjct: 122 VGYGK-----MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP 168
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 239/405 (59%), Gaps = 9/405 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL + R +F+ +P + ++ LI + S ++ LF ML GL F P +
Sbjct: 173 SLLYARRVFDAMPARNEV-TWSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSI 228
Query: 109 ----KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
+AC + +G +H+L+ K G+ +D GN+LL MYA ID A A+F+EM V
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+D VS+S++++G+V +A VF +M+ N P++ T+VSL+ AC+ L ++ G
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H ++ GL + ++ AL++MY+KCG ++ + +VFN+M +++ SW MI+G +G G
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A +LF +M G PD ++F +LSACSH GLV EGK++F M Y + P MEHY C
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 468
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+L R G ++EAY I++MP + + + LGACR + + L + +++ +L PE
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNI-DLGKKVSRMIQELGPE 527
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
N+VL +++ S +G +D AAE+ + +G K PGCSW+++N
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 60/343 (17%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ + P+N+T+PF +KAC G ++H GL +D ++ LL MY C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK--VFHRMKLANESPNSVTLVSLV 209
+ A +F MP RD+V+W++M+AG+ A+ + +M++ PN+ TLV+L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 210 SACTSLINVRAGESIHSYAVVNGLELD----------VALGTALVEMYSKCGHVEKAFKV 259
+ G S+H+Y + L + V LGTAL++MY+KCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG---LKPDSISFSAILSACSHL 316
F+ M +N +W+ +I G R A LF M+ G L P SI ++ L AC+ L
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACASL 238
Query: 317 -----------------------------------GLVDEGKNYFDEMARVYNIKPTMEH 341
GL+D+ FDEMA +K T+
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVS- 293
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPT---EPNAVILRSFLGAC 381
Y +V + G EEA+ + + M EP+A + S + AC
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 239/405 (59%), Gaps = 9/405 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL + R +F+ +P + ++ LI + S ++ LF ML GL F P +
Sbjct: 173 SLLYARRVFDAMPARNEV-TWSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSI 228
Query: 109 ----KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
+AC + +G +H+L+ K G+ +D GN+LL MYA ID A A+F+EM V
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+D VS+S++++G+V +A VF +M+ N P++ T+VSL+ AC+ L ++ G
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H ++ GL + ++ AL++MY+KCG ++ + +VFN+M +++ SW MI+G +G G
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A +LF +M G PD ++F +LSACSH GLV EGK++F M Y + P MEHY C
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 468
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+L R G ++EAY I++MP + + + LGACR + + L + +++ +L PE
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNI-DLGKKVSRMIQELGPE 527
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
N+VL +++ S +G +D AAE+ + +G K PGCSW+++N
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 60/343 (17%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ + P+N+T+PF +KAC G ++H GL +D ++ LL MY C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK--VFHRMKLANESPNSVTLVSLV 209
+ A +F MP RD+V+W++M+AG+ A+ + +M++ PN+ TLV+L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 210 SACTSLINVRAGESIHSYAVVNGLELD----------VALGTALVEMYSKCGHVEKAFKV 259
+ G S+H+Y + L + V LGTAL++MY+KCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG---LKPDSISFSAILSACSHL 316
F+ M +N +W+ +I G R A LF M+ G L P SI ++ L AC+ L
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACASL 238
Query: 317 -----------------------------------GLVDEGKNYFDEMARVYNIKPTMEH 341
GL+D+ FDEMA +K T+
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVS- 293
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPT---EPNAVILRSFLGAC 381
Y +V + G EEA+ + + M EP+A + S + AC
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 241/409 (58%), Gaps = 17/409 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL + R +F+ +P + ++ LI + S ++ LF ML GL F P +
Sbjct: 288 SLLYARRVFDAMPARNEV-TWSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSI 343
Query: 109 ----KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
+AC + +G +H+L+ K G+ +D GN+LL MYA ID A A+F+EM V
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+D VS+S++++G+V +A VF +M+ N P++ T+VSL+ AC+ L ++ G
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H ++ GL + ++ AL++MY+KCG ++ + +VFN+M +++ SW MI+G +G G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A +LF +M G PD ++F +LSACSH GLV EGK++F M Y + P MEHY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 583
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLK 400
MVD+L R G ++EAY I++MP + + + LGACR +Y + +LGK ++ +
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR-----VYKNIDLGKKVSRMIQE 638
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L PE N+VL +++ S +G +D AAE+ + +G K PGCSW+++N
Sbjct: 639 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 687
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 186/390 (47%), Gaps = 65/390 (16%)
Query: 49 SLHFTRS--LFNNLPVTPPLFAYNTLIRAYAKTS--CSIESIKLFDEMLKTGLRPDNFTY 104
S H +R+ LF+ +P +P + YN LIRAY+ +S + + + L+ ML+ + P+N+T+
Sbjct: 70 SGHLSRAHHLFDQIP-SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
PF +KAC G ++H GL +D ++ LL MY C + A +F MP
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 165 RDVVSWSSMIAGFVACDSPSDALK--VFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
RD+V+W++M+AG+ A+ + +M++ PN+ TLV+L+ + G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 223 SIHSYAVVNGLELD----------VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
S+H+Y + L + V LGTAL++MY+KCG + A +VF+ M +N +W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 273 IMISGLADNGRGNYAISLFAKMIQTG---LKPDSISFSAILSACSHL------------- 316
+I G R A LF M+ G L P SI ++ L AC+ L
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACASLDHLRMGEQLHALL 366
Query: 317 ----------------------GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
GL+D+ FDEMA +K T+ Y +V + G
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVS-YSALVSGYVQNGR 421
Query: 355 IEEAYHIIRNMPT---EPNAVILRSFLGAC 381
EEA+ + + M EP+A + S + AC
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 237/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+HT +K+ N + S I + + L R + L + ++ +I Y +
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++KLF EM G+R DN + + AC + G +H+ + G D IG
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +YA C A FE++ +D +SW+++I+GF +AL+VF +M A
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T S VSA + N++ G+ IH+ + G + + L+ +YSKCG +E A +
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M EKN+ SW MI+G + +G G+ A+SLF +M Q GL P+ ++F +LSACSH+GLV
Sbjct: 675 FFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLV 734
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M++ + + P EHY C+VD+LGRA L+ A I MP EP+A+I R+ L
Sbjct: 735 NEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLS 794
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC H + + + + LL+LEPE A YVL +++ ++SG WD + +G+ K
Sbjct: 795 ACTVHKNI-EIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKK 853
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 854 EPGRSWIEVKN 864
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 169/323 (52%), Gaps = 2/323 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
T + +N ++ AY + ES +F +M GL P+ +TYP +++ C + +G
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ + K G + Y+ + L+ MYA E+D A+ + + + DVVSW++MIAG+ D
Sbjct: 437 IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDL 496
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++ALK+F M+ +++ S +SAC + + G+ IH+ + ++G D+++G A
Sbjct: 497 FAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA 556
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV +Y++CG + A+ F + K+ SW +ISG A +G A+ +F++M Q G++ +
Sbjct: 557 LVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEAN 616
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+F + +SA ++ + +GK M + E ++ + + G IE+A
Sbjct: 617 LFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREF 675
Query: 363 RNMPTEPNAVILRSFLGACRNHG 385
MP E N V + + HG
Sbjct: 676 FEMP-EKNVVSWNAMITGYSQHG 697
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 177/351 (50%), Gaps = 3/351 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH +K L T + + + L S +L +F+ + + +YN+LI A+
Sbjct: 234 QLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRI-SYNSLISGLAQR 292
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S +++LF++M ++PD T ++ AC G +HS + K+G+ SD I
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+LL +Y C +I+ A F +VV W+ M+ + + S++ +F +M++
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T S++ CTSL + GE IH+ + +G + +V + + L++MY+K G ++ A +
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+RE+++ SWT MI+G + A+ LF +M G++ D+I FS+ +SAC+ + +
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQAL 532
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
++G+ + + + +V + R G ++AY + + N
Sbjct: 533 NQGQQ-IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN 582
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 36/400 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH K+ D + SR I L+ + LF+++P + F +N +I
Sbjct: 31 KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF-WNKVISGLLAK 89
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ + + LF M+ + PD T+ V++AC G + +H+ I G S +
Sbjct: 90 KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLV 149
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ +Y+ +D+AK VFE + ++D VSW +MI+G +A+ +F +M +
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P S++SACT + + GE +H + V GL + + ALV +YS+ G++ A +
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F+ M ++ S+ +ISGLA G + A+ LF KM +KPD ++ +++LSAC+ +G
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329
Query: 319 VDEGKN-------------------YFDEMARVYNIKPTMEHY-----------GCMVDM 348
+GK D + ++I+ E++ M+
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389
Query: 349 LGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHG 385
G+ G + E+Y I M E PN S L C + G
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 161/306 (52%), Gaps = 11/306 (3%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I ++ E+I LF +M K+ + P + + V+ AC + L +G +H I
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL S+ ++ N L+ +Y+ + A+ +F +M RD +S++S+I+G AL
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F +M+L P+ VT+ SL+SAC S+ G+ +HSY + G+ D+ + +L+++Y
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KC +E A + F +N+ W +M+ G + + +F +M GL P+ ++
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 308 AILSACSHLGLVDEGKNYFDEMAR---VYNIKPTMEHYGC--MVDMLGRAGLIEEAYHII 362
+IL C+ LG +D G+ ++ + +N+ Y C ++DM + G ++ A I+
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNV------YVCSVLIDMYAKHGELDTARGIL 473
Query: 363 RNMPTE 368
+ + E
Sbjct: 474 QRLREE 479
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N T + L C + ++ + +H+ +G + + LG+ L+++Y G V+ A K+F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+ + N+ W +ISGL + + LF+ MI + PD +F+++L ACS
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 250/442 (56%), Gaps = 12/442 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
L QLH +K L + +++R + + L + R +F+ +P YNTL+
Sbjct: 41 LAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAHLAYARQVFDRVPHPADAVWYNTLL 100
Query: 74 RAYAKTSCSIES-----IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
R YA++S S +++F ML+ G+ PD +T+ ++KAC G H+L
Sbjct: 101 RGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAV 160
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G Y+ TL+ MYA C + A+ +F VVS+++MIA V P +AL
Sbjct: 161 KLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALV 220
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ P SVT++S++SAC L + G +H Y GL V + TAL++MY+
Sbjct: 221 LFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYA 280
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A VF M K+ Q+W++MI A++G G AISLF +M + G+KPD I+F
Sbjct: 281 KCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLG 340
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH GLV EG YFD+M + + I P ++HYGC+ D+L R+G +E AY I +P
Sbjct: 341 VLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPIN 399
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P ++ R+ L AC HG L + + +LKL+ G +YV+ +++ + +G W+ +
Sbjct: 400 PTPILWRTLLSACGGHGD-FELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMV 458
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
+++KG+ KVPGCS +++++
Sbjct: 459 RKLMSEKGVVKVPGCSSIEIDN 480
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 254/451 (56%), Gaps = 4/451 (0%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
+ K + QLH + + N + ++ + L + SL LF+ + LF +N
Sbjct: 13 VRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS-KRNLFLWN 71
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+IR YA +I L+ +M GL PD FT+PFV+KAC + G +H + +
Sbjct: 72 VMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRS 131
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL+SD ++G L+ MYA C ++ A+ VF+++ RDVV W+SM+A + P ++L +
Sbjct: 132 GLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALC 191
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M P T V ++A + G+ +H Y+ +G E + + TAL++MY+K
Sbjct: 192 RVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKS 251
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G V A +F L+ EK + SW MI+G A +G N A+ LF +M + + PD I+F +L
Sbjct: 252 GSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVL 310
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+ACSH GL++EGK +F M +NI PT++HY CM+D+LG G +EEAY +I M EP+
Sbjct: 311 AACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPD 370
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
A + + L +C+ HG V + L K L++LEP+ G NYV+ +++ + +G WD A L
Sbjct: 371 AGVWGALLHSCKIHGNVEMGELALEK-LVELEPDDGGNYVILSNMYAQAGKWDGVARLRD 429
Query: 431 AINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ KGL K CSW++V + +S++T+
Sbjct: 430 LMMNKGLKKSIACSWIEVGNKVHAFLSEDTS 460
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 126/221 (57%), Gaps = 2/221 (0%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++++C I G +H+ I +VG+ + + L+ +Y C + A +F+ +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 164 VRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
R++ W+ MI G+ A + P + A+ ++++M+ P+ T ++ AC++L + G+
Sbjct: 64 KRNLFLWNVMIRGY-AWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH + +GLE DV +G AL++MY+KCG VE A +VF+ + E+++ W M++ + NG
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+ + +++L M GLKP +F ++A + GL+ +GK
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGK 223
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 241/398 (60%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ +P L +N LI AYA +C + ++ +M+ + ++P+ T ++ C
Sbjct: 134 QQIFDEMP-QRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVSILSVCSS 192
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +VH + K ++ D ++ N L+ +Y+ C I A VF+ MP+R+VVSW+S+
Sbjct: 193 LRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVVSWTSL 252
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+ + P++AL F +M+ N P+ +T++ +V C+ L + GE I Y V GL
Sbjct: 253 INGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKTGL 312
Query: 234 -ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ A+ L++M++KCG++++A ++F+ M EK + SWTIMI GLA G G A+ F
Sbjct: 313 VKESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMIQGLAMYGHGLSALVRFC 372
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + G KPDS+ F ++LSACSH GLVDEG F M Y+I P MEHYGCMVD+L RA
Sbjct: 373 QMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHIXPWMEHYGCMVDILCRA 432
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL++EA+ ++NMP +P+ ++ R+ LGAC G + L + + L +L P+ +YVL
Sbjct: 433 GLVDEAFKFVQNMPIKPDMIVWRTLLGACXXQGNI-SLANQVMNXLCELGPKKSEDYVLL 491
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKV-PGCSWVKVN 449
+++ + + WD E+ + +G+ K PGCS+++ +
Sbjct: 492 SNLFASNAEWDNVXEVRKEMGDRGVTKQDPGCSFIEAD 529
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 184/336 (54%), Gaps = 3/336 (0%)
Query: 33 HNTCIISRFILTSLSISLHFTRSLFNNLPVTPP---LFAYNTLIRAYAKTSCSIESIKLF 89
HN + S+ +++ SI+L T S+ + + +NT+IR Y + + E+I ++
Sbjct: 8 HNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILIY 67
Query: 90 DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC 149
+ + K GL+ D +T FV+KACG +I G +H IFK+G + + I LL MY
Sbjct: 68 NHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLSMYGLF 127
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
E + +F+EMP RD+V W+++IA + + P +V + M +N PN VT VS++
Sbjct: 128 DEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVSIL 187
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S C+SL +R G+++H Y N +E DV + AL+++YSKCG + A +VF LM +N+
Sbjct: 188 SVCSSLRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVV 247
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SWT +I+G +DN N A+ F +M ++PD I+ ++ CS L + G+ +
Sbjct: 248 SWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYV 307
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +K + ++DM + G I+ A I M
Sbjct: 308 VKTGLVKESPAIANVLMDMHAKCGNIKRACQIFDGM 343
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 269/511 (52%), Gaps = 69/511 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
H LI S T+ LHQ+H +L N+ ++++ I +S S+ SL + S+F
Sbjct: 42 HFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD-H 100
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P LF +N LIR A+ S S+ F ML+ +RPD T PFV+K+ + +G+G +
Sbjct: 101 PNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCL 160
Query: 124 HSLIFKVGLDSDKYIGNTLLRMY---------------------------------AACK 150
H + K+GL+ D ++ +L+ MY CK
Sbjct: 161 HGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCK 220
Query: 151 EIDVAKA--VFEEMPVRDVVSWSSMIAGFVA-----------CDSP-------------- 183
D++KA +FE MP R+ SW+S+I GFV P
Sbjct: 221 VGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGF 280
Query: 184 ------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
AL +F RM PN +T+VS + ACT + ++ GE IH+Y NG +L+
Sbjct: 281 SQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNR 340
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+GTALV+MY+KCG+++ A +VF + K+L +W++MI G A +G + A+ F KM
Sbjct: 341 GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA 400
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G+ PD + F AIL+ACSH G VD+G N+F+ M Y+I+PTM+HY +VD+LGRAG ++E
Sbjct: 401 GINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDE 460
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
A I++MP P+ VI + ACR H + + + + LL+LEP+ +YV ++V +
Sbjct: 461 ALSFIQSMPINPDFVIWGALFCACRAHKNI-EMAELTAEKLLQLEPKHPGSYVFLSNVYA 519
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
G W+ + + +G+ K PG S+++V
Sbjct: 520 AVGRWEDVERVRTLMKNRGVEKDPGWSYIEV 550
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 46/275 (16%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+ L+ A +L + IH+ ++ L + + T L+ ++ A +F
Sbjct: 43 FIPLIHASNTLPQL---HQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA-----------C 313
NL + +I GLA+N R ++S F M++ ++PD ++ +L + C
Sbjct: 100 HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRC 159
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA-- 371
H G++ G FD RV +VDM + G + + P A
Sbjct: 160 LHGGVMKLGLE-FDSFVRV-----------SLVDMYVKIGELGFGLQLFDESPQRNKAES 207
Query: 372 VILRSFL--GACRNHGQVLYLDDNLGKLLLKLEPELGA---NYVLAASVSSLSGNWDTAA 426
++L + L G C+ D + L + PE A N ++ V +G+ D A
Sbjct: 208 ILLWNVLINGCCK------VGDLSKAASLFEAMPERNAGSWNSLINGFVR--NGDLDRAR 259
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
EL V + +K + SW + +G ++ E A
Sbjct: 260 ELFVQMPEKNV-----VSWTTMINGFSQNGDHEKA 289
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 247/399 (61%), Gaps = 6/399 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIK-LFDEMLKTG-LRPDNFTYPFVVKAC 111
R+LF+ +P P F YN+LIRA + ++ ML+ G RP+ FT F +KAC
Sbjct: 78 RTLFDQIP-DPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKAC 136
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSW 170
G G +H+ + GL++ Y+ LL +YA C+++ +A+ VF+ M P + +V+W
Sbjct: 137 AAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVAW 196
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
S+MI G+ ++AL +F M+ P+ VT+V ++SAC + G+ +H+Y
Sbjct: 197 SAMINGYSRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDR 256
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G+ +D+ L TAL++MY+KCG +E+A VF+ M EK+ ++W+ MI G A +G A+ L
Sbjct: 257 KGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGL 316
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F++M++ ++P++++F +LSAC+H GLVD+G+ Y+ M + IKP+ME+YGCM+D+L
Sbjct: 317 FSRMLELKVRPNNVTFIGVLSACAHSGLVDDGRRYWSIMQNL-GIKPSMENYGCMIDLLC 375
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
R+GL+++AY + +MP PN++I R+ L AC++ ++ + ++ K LL+LEP NYV
Sbjct: 376 RSGLLDDAYSFVIDMPISPNSIIWRTLLVACKSSNRI-DIAESASKRLLELEPHNPENYV 434
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L +++ + + WD + L + + V GCS +++N
Sbjct: 435 LLSNLCASNSQWDRVSYLRKKMKDSNVTAVAGCSSIEIN 473
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 227/383 (59%), Gaps = 2/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ LI + ++E+++ F EM +G+ D T V+ A + G VH
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 128 FKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ G + D Y+G+ L+ MY+ C D A VF EMP R++VSW ++IAG+V C+ +A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LKVF M + PN T+ S ++AC L ++ G +H Y + L L+ LGTALV+M
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDM 350
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG V++A VF + K++ WT MI+GLA G +++LF++MI++ ++P+ ++F
Sbjct: 351 YSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTF 410
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSAC+H GLVDEG F M Y ++P ++HYGCMVD+LGRAG +EEA I +MP
Sbjct: 411 LGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMP 470
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EP + + C H + L +++G L+KL+P Y+L A++ S W+ AA
Sbjct: 471 MEPTPGVWGALFSGCMIH-KAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 427 ELMVAINQKGLNKVPGCSWVKVN 449
+ + KG++K PGCSW++VN
Sbjct: 530 NVRRLMKGKGVDKSPGCSWIEVN 552
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 197/358 (55%), Gaps = 11/358 (3%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
T HL Q ++ + + L H+T +S IL S + L +T LF+ L TP +F +NT+IR
Sbjct: 20 TFDHLKQTTSILITSGLAHHTFFLSD-ILRSATKDLGYTLLLFDRL-ATPYIFLWNTIIR 77
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
++ +S + + + G+ PD T+P ++KA + L ++ I K GLD
Sbjct: 78 GFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSK-LRNENPFQFYAHIVKFGLDF 136
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D ++ N+L+ +A C +D ++ +F E +DVVSW+++I G + +AL+ F M+
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-DVALGTALVEMYSKCGHV 253
+ + VT+VS++ A L +V G +H + V +G + DV +G+ALV+MYSKCG+
Sbjct: 197 SSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYC 256
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A KVFN M +NL SW +I+G R A+ +F +MI G++P+ + ++ L+AC
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTAC 316
Query: 314 SHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ LG +D+G+ Y D N K +VDM + G ++EA + +P +
Sbjct: 317 AQLGSLDQGRWLHEYVDRSKLGLNSKLGTA----LVDMYSKCGCVDEALLVFEKLPAK 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FN +P T L ++ LI Y + + E++K+F EM+ G+ P+ T + AC +
Sbjct: 262 VFNEMP-TRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + + L + +G L+ MY+ C +D A VFE++P +DV W++MI
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLE 234
G +L +F +M + PN VT + ++SAC V G + + + LE
Sbjct: 381 GLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLE 440
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISG 277
+V +V++ + G +E+A K M E W + SG
Sbjct: 441 PNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 270/511 (52%), Gaps = 69/511 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLP 61
H +L+ K + L Q+H LF+K +D ++ + IL S+S +L + R L P
Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIG 120
P F +NTL+R Y+++ S+ +F EM++ G + PD+F++ FV+KA + G
Sbjct: 67 -EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----------------- 163
+H K GL+S ++G TL+ MY C ++ A+ VF+EM
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 164 --------------VRDVVSWSSMIAGFVACDSPSDALKVF----HR------------- 192
VR+ SW+ M+AG++ A ++F HR
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 193 --------------MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
++ A SPN V+L ++SAC+ + G+ +H + G V+
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKN-LQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+ AL++MYS+CG+V A VF M+EK + SWT MI+GLA +G+G A+ LF +M
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G+ PD ISF ++L ACSH GL++EG++YF EM RVY+I+P +EHYGCMVD+ GR+G +++
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
AY I MP P A++ R+ LGAC +HG + L + + + L +L+P + VL ++ +
Sbjct: 426 AYDFICQMPIPPTAIVWRTLLGACSSHGNI-ELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+G W A + ++ + + K S V+V
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 249/457 (54%), Gaps = 36/457 (7%)
Query: 27 LKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIES 85
L+ LD + +++ S+ + R LF+ PV L ++NTLI Y + E+
Sbjct: 152 LRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRD-LVSWNTLIGGYVRRGNPAEA 210
Query: 86 IKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++LF M+ +RPD T V CG+ + +G +H + G+ + N L+
Sbjct: 211 LELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALM 270
Query: 144 RMYAACKEIDVAKAVFE-------------------------------EMPVRDVVSWSS 172
MY C +++AK+VFE EMP RDV W++
Sbjct: 271 DMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNA 330
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
++ G+V C +AL +FH M+ A+ P+ +T+V+L++AC+ L + G +H Y +
Sbjct: 331 LMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHR 390
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L VALGT+L++MY+KCG++EKA +F + EKN +WT MI GLA++G N AI F
Sbjct: 391 LVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFR 450
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
MI+ G KPD I+F +LSAC H GLV EG+ +F M Y+++ M+HY CM+D+LGRA
Sbjct: 451 TMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRA 510
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G ++EA ++ MP EP+AV+ + ACR G + L + L++++P YVL
Sbjct: 511 GHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNI-SLGEKAAMKLVEIDPSDSGIYVLL 569
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ + + A ++ + G+ KVPGCS +++N
Sbjct: 570 ANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELN 606
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 193/377 (51%), Gaps = 54/377 (14%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTS--------CSIESIKLFDEMLKTGL-RPDNFTYP 105
+L ++LP + AYN IRA + + + L+ +L++G RPD+ T+P
Sbjct: 74 ALLSSLPAS----AYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFP 129
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
F++KAC R G G + + + ++GLDSD ++ N + ++ A+ +F+ PVR
Sbjct: 130 FLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVR 189
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGES 223
D+VSW+++I G+V +P++AL++F RM + A P+ VT+++ VS C + ++ G
Sbjct: 190 DLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRR 249
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA---- 279
+H + +G+ V L AL++MY KCG +E A VF + + + SWT MI G A
Sbjct: 250 LHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGL 309
Query: 280 -DNGRGNY--------------------------AISLFAKMIQTGLKPDSISFSAILSA 312
D+ R + A+SLF +M + + PD I+ +L+A
Sbjct: 310 MDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTA 369
Query: 313 CSHLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
CS LG ++ G Y ++ V+++ ++DM + G IE+A HI + +P E
Sbjct: 370 CSQLGALEMGMWVHRYIEKHRLVFSVALGTS----LIDMYAKCGNIEKAIHIFKEIP-EK 424
Query: 370 NAVILRSFLGACRNHGQ 386
NA+ + + NHG
Sbjct: 425 NALTWTAMICGLANHGH 441
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 241/409 (58%), Gaps = 17/409 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL + R +F+ +P + ++ LI + S ++ LF ML GL F P +
Sbjct: 288 SLLYARRVFDAMPARNEV-TWSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSI 343
Query: 109 ----KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
+AC + +G +H+L+ K G+ +D GN+LL MYA ID A A+F+EM V
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+D VS+S++++G+V +A VF +M+ N P++ T+VSL+ AC+ L ++ G
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H ++ GL + ++ AL++MY+KCG ++ + +VFN+M +++ SW MI+G +G G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A +LF +M G PD ++F +LSACSH GLV EGK++F M Y + P MEHY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYIC 583
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLK 400
MVD+L R G ++EAY I++MP + + + LGACR +Y + +LGK ++ +
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR-----VYKNIDLGKKVSRMIQE 638
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L PE N+VL +++ S +G +D AAE+ + +G K PGCSW+++N
Sbjct: 639 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 687
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 186/390 (47%), Gaps = 65/390 (16%)
Query: 49 SLHFTRS--LFNNLPVTPPLFAYNTLIRAYAKTS--CSIESIKLFDEMLKTGLRPDNFTY 104
S H +R+ LF+ +P +P + YN LIRAY+ +S + + + L+ ML+ + P+N+T+
Sbjct: 70 SGHLSRAHHLFDQIP-SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
PF +KAC G ++H GL +D ++ LL MY C + A +F MP
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 165 RDVVSWSSMIAGFVACDSPSDALK--VFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
RD+V+W++M+AG+ A+ + +M++ PN+ TLV+L+ + G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 223 SIHSYAVVNGLELD----------VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
S+H+Y + L + V LGTAL++MY+KCG + A +VF+ M +N +W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 273 IMISGLADNGRGNYAISLFAKMIQTG---LKPDSISFSAILSACSHL------------- 316
+I G R A LF M+ G L P SI ++ L AC+ L
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACASLDHLRMGEQLHALL 366
Query: 317 ----------------------GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
GL+D+ FDEMA +K T+ Y +V + G
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVS-YSALVSGYVQNGR 421
Query: 355 IEEAYHIIRNMPT---EPNAVILRSFLGAC 381
EEA+ + + M EP+A + S + AC
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 256/474 (54%), Gaps = 39/474 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLH-FTRSLFNNLPVTPPLFAYNTL 72
++ + Q+H L+ LD + I+++ I LT L + + + R + + P F + +
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP-FLWTAV 120
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR YA E+I ++ M K + P +FT+ ++KACG + +G H+ F++
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA----------------- 175
Y+GNT++ MY C+ ID A+ VF+EMP RDV+SW+ +IA
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 176 --------------GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
GF P +AL+ F RM+ + + VT+ +SAC L +
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 222 ESIHSYAVVNGLELD--VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
+ A +G V +G+AL++MYSKCG+VE+A VF M KN+ +++ MI GLA
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 360
Query: 280 DNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+GR A+ LF M+ QT +KP++++F L ACSH GLVD+G+ FD M + + ++PT
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPT 420
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+HY CMVD+LGR G ++EA +I+ M EP+ + + LGACR H + + + L
Sbjct: 421 RDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNP-EIAEIAAEHL 479
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
+LEP++ NY+L ++V + +G+W + I +KGL K P SWV +G
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQ 533
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 47/313 (15%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK-EID-VAKAVFEEMPVRDVVSWS 171
C+ + +H + + GLD YI L+R +D A+ V E + R+ W+
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-V 230
++I G+ +A+ ++ M+ +P S T +L+ AC ++ ++ G H+ +
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE------------------------- 265
G V +G +++MY KC ++ A KVF+ M E
Sbjct: 179 RGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 266 ------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
K++ +WT M++G A N + A+ F +M ++G++ D ++ + +SAC+ LG
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG-- 295
Query: 320 DEGKNYFD---EMARVYNIKPTMEHY---GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
Y D ++A+ P+ +H ++DM + G +EEA ++ +M + N
Sbjct: 296 --ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-NVFT 351
Query: 374 LRSFLGACRNHGQ 386
S + HG+
Sbjct: 352 YSSMILGLATHGR 364
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF--KVFNLMR 264
SL+S IN+ + IH + + GL+ + T L+ +K G + +V ++
Sbjct: 51 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+N WT +I G A G+ + AI+++ M + + P S +FSA+L AC + ++ G+
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 325 YFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMP 366
+ + R+ + G M+DM + I+ A + MP
Sbjct: 171 FHAQTFRLRGF--CFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 236/405 (58%), Gaps = 5/405 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +PV + ++N +I Y ++ E+I F EM + + P+ T V+ ACG
Sbjct: 217 RRLFDEIPVKD-VVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGH 275
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+G + S + G S+ + N L+ MY C E D+A+ +F+ + +DV+SW++M
Sbjct: 276 TRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTM 335
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-G 232
I G+ +AL +F M +N PN VT + ++ AC L + G+ +H+Y N
Sbjct: 336 IGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLR 395
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ +L T+L++MY+KCG +E A +VF M +NL SW M+SG A +G A++LF+
Sbjct: 396 NSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFS 455
Query: 293 KMIQTGL-KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+M+ GL +PD I+F +LSAC+ GLVD G YF M + Y I P ++HYGCM+D+L R
Sbjct: 456 EMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLAR 515
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
A EEA +++NM EP+ I S L AC+ HG+V + + + + L +LEPE +VL
Sbjct: 516 AEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEF-GEYVAERLFQLEPENAGAFVL 574
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+++ + +G WD A + +N KG+ KVPGC+ +++ DG E
Sbjct: 575 LSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEI-DGDVHEF 618
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 205/394 (52%), Gaps = 36/394 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLF--NNLPV 62
L++ K ++ Q+H+L +KT L++ + S+ F S S L + SLF N
Sbjct: 33 NLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHH 92
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
+F +N+LIR Y+ +S + S+ LF ML G++P++ T+PF+ K+C + G
Sbjct: 93 KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQ 152
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE---------------------- 160
+H+ K+ L + ++ +++ MYA+ E+D A+ VF+
Sbjct: 153 LHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGC 212
Query: 161 ---------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
E+PV+DVVSW++MI+G+V +A+ F+ M+ AN PN T+V ++SA
Sbjct: 213 LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSA 272
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C + G+ I S+ NG ++ L AL++MY KCG + A ++F+ + EK++ SW
Sbjct: 273 CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW 332
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI G + A++LF M+++ +KP+ ++F IL AC+ LG +D GK + +
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK 392
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++DM + G IE A + R+M
Sbjct: 393 NLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM 426
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 263/475 (55%), Gaps = 36/475 (7%)
Query: 8 TLIQLSKT-VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTP 64
T++Q T + L ++H +KT L H+T SR + S S +++ LF +P +P
Sbjct: 29 TMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIP-SP 87
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
L+ +NT+IR ++++S +I LF +ML + + P TYP V KA + G +H
Sbjct: 88 NLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQLH 147
Query: 125 SLIFKVGLDSDKYIGNTLLRMYA-------------------------------ACKEID 153
+ K+GL+ D++I NT++ MYA C E+D
Sbjct: 148 GRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVD 207
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
++ +F+ MP R V+W+SMI+G+V +AL++F +M+ P+ T+VSL+SAC
Sbjct: 208 KSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACA 267
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L ++ GE +H Y EL+V + TA+++MY KCG + KA +VF + L W
Sbjct: 268 HLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNS 327
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+I GLA NG AI F+K+ + LKPD +SF +L+AC ++G V + ++YF M Y
Sbjct: 328 IIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKY 387
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
I+P+++HY CMV++LG+A L+EEA +I+ MP + + +I S L +CR HG V +
Sbjct: 388 EIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNV-EIAKR 446
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ + +L P + Y+L ++V + S ++ A E + + ++ K PGCS +++
Sbjct: 447 AAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIEL 501
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 247/431 (57%), Gaps = 41/431 (9%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LFN +F++N++I A++ S+E+++ F M K L+P+ T+P +K+C
Sbjct: 30 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L + G H G + D ++ + L+ MY+ C E+ A+ +F+E+ R++VSW+SMI
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 175 AGFVACDSPSDALKVF-------------------------------HRMKLANE-SPNS 202
G+V D AL+VF HRM E + N+
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
VTL +++ AC + R G+ IH + GLE +V +GT++++MY KCG VE A K F+
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
MREKN++SW+ M++G +G A+ +F +M G+KP+ I+F ++L+ACSH GL++EG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
++F M+ ++++P +EHYGCMVD+LGRAG ++EA+ +I+ M P+ V+ + LGACR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 383 NHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
H V +LG++ L +L+P+ YVL +++ + +G W+ + + + GL
Sbjct: 390 MHKNV-----DLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLV 444
Query: 439 KVPGCSWVKVN 449
K PG S V +
Sbjct: 445 KPPGFSLVDIK 455
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 251/434 (57%), Gaps = 5/434 (1%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS--LHFTRSLFNNLPVTPPLFAYNTLIRAY 76
L Q+H + T L +I++ + + + + + +TR LF ++P P F +++LI
Sbjct: 35 LQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIP-KPDTFLFHSLITLT 93
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+K S ES+ + ML + N+T+ V+K+ IG ++H ++ G D
Sbjct: 94 SKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDA 153
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
Y+ L+ YA + +A+ VF++MP + VV+W+SMI+G+ +A+++F M+
Sbjct: 154 YVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDL 213
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+S T VSL+SAC + + G +H Y N +L+V LGTAL+ MYS+CG+V KA
Sbjct: 214 GVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKA 273
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF+ M EKN+ +WT MISG +G G+ AI LF +M G +P++++F A+LSAC+H
Sbjct: 274 REVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHA 333
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM-PTEPNAVILR 375
GLVDEG+ F M + Y + P++EH CMVDMLGRAG + EAY I+N P EP +
Sbjct: 334 GLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWT 393
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGAC+ H L + + LL +EPE +YV+ +++ +L+G D ++ + +
Sbjct: 394 AMLGACKMHKN-FDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRN 452
Query: 436 GLNKVPGCSWVKVN 449
L K G S + V+
Sbjct: 453 RLKKEVGYSTIDVD 466
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 242/434 (55%), Gaps = 9/434 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H + + D + + ++ I + S+ R +F+ ++ +N L RA A
Sbjct: 100 VHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETR-ERTIYVWNALFRALAMVG 158
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL----IGIGGSVHSLIFKVGLDSDK 136
C E + L+ +M G+ D FTY FV+KAC L + G +H+ I + G +++
Sbjct: 159 CGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANI 218
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL- 195
++ TLL +YA + A +VF MP ++ VSWS+MIA F + P AL++F M L
Sbjct: 219 HVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLE 278
Query: 196 ANES-PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
A++S PNSVT+V+++ AC L + G+ IH Y + GL+ + + AL+ MY +CG +
Sbjct: 279 AHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEIL 338
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+VF+ M+ +++ SW +IS +G G AI +F MI G P ISF +L ACS
Sbjct: 339 MGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACS 398
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLV+EGK F+ M Y I P MEHY CMVD+LGRA ++EA +I +M EP +
Sbjct: 399 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVW 458
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S LG+CR H V L + LL +LEP NYVL A + + + W A +M +
Sbjct: 459 GSLLGSCRIHCNV-ELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEA 517
Query: 435 KGLNKVPGCSWVKV 448
+GL K+PGCSW++V
Sbjct: 518 RGLQKLPGCSWIEV 531
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 11/275 (4%)
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
P T+ ++ +C + + G VH + G D D ++ L+ MY ID A+ V
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT----S 214
F+E R + W+++ + L ++ +M + T ++ AC S
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ ++ G+ IH++ + +G E ++ + T L+++Y+K G V A VF M KN SW+ M
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLK--PDSISFSAILSACSHLGLVDEGKNYFDEMAR- 331
I+ A N A+ LF M+ P+S++ +L AC+ L +++GK + R
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315
Query: 332 -VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +I P + ++ M GR G I + NM
Sbjct: 316 GLDSILPVL---NALITMYGRCGEILMGQRVFDNM 347
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P T L+ +C ++ G +H V +G + D L T L+ MY + G +++A K
Sbjct: 75 NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARK 134
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC--SHL 316
VF+ RE+ + W + LA G G + L+ +M G+ D +++ +L AC S L
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL 194
Query: 317 GL--VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + +GK + R + + + ++D+ + G + A + MPT+
Sbjct: 195 SVSPLQKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK 247
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 248/443 (55%), Gaps = 9/443 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
QLH F+K+ N + F S S L++ R L N P + YNT+IRAY+ TS
Sbjct: 6 QLHAQFIKSQNQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYY-YNTIIRAYSHTS 64
Query: 81 CS---IESIKLFDEMLKTGL---RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+++ LF ML+ +PD FTY F +K+CGR L +H I K+G
Sbjct: 65 NPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGF 124
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D YI N L+ MY+ E+ +A+ VF+ M RDVVSW+SMIAGFV +A+++F RM
Sbjct: 125 DLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRML 184
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
N T++S++ C + G +H G++ + TAL+ MYSKCG +E
Sbjct: 185 EVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLE 244
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +VF+ + ++++ WT MI GLA +G AI LF +M +KPD + +LSA
Sbjct: 245 SAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYR 304
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
+ GLV EG +F+++ + Y++KP ++H+GCMVD+L + G +EEA I MP +P+AVI
Sbjct: 305 NAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIW 364
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLK-LEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
R+ + AC+ H + + L L+ + +Y+LA++V + +G W AE+ +N
Sbjct: 365 RTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMN 424
Query: 434 QKGLNKVPGCSWVKVNDGSAEEM 456
+KGL K PG S ++V DG E
Sbjct: 425 KKGLVKPPGSSRIEV-DGVVHEF 446
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 268/476 (56%), Gaps = 20/476 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNN 59
R I +L + + L QLH L+T+ + + + S S S +++ +F++
Sbjct: 30 RRILSLAETCSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLSSSFSDVNYAFRVFDS 89
Query: 60 LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLI 117
+ F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC +
Sbjct: 90 IE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGL 148
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH I K G D Y+ N L+ Y +C +D+A+ VF+EMP R +VSW+SMI
Sbjct: 149 SEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 208
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLE 234
V AL++F M+ + E P+ T+ S++SAC L ++ G H + + N +
Sbjct: 209 VRVGEYDSALQLFRDMQKSFE-PDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVA 267
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+DV + +L+EMY KCG + A +VF MR+ +L SW MI G A +G+ A++ F M
Sbjct: 268 MDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCM 327
Query: 295 IQTG--LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
++ G +KP+S++F A+L AC+H G+V++G+ YFD M R Y I+P +EHYGC++D+L RA
Sbjct: 328 VKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARA 387
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL-KLEPELGAN--- 408
G I EA ++ +MP +P+AVI RS L AC G + L + + + ++ +E +N
Sbjct: 388 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNC 447
Query: 409 ---YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YVL + V + + W+ + ++ G+ K PGCS +++N S E + +T+
Sbjct: 448 SGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGDTS 503
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 257/438 (58%), Gaps = 5/438 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPV-TPPLFAYNTLIRAYAK 78
QLH L +K L +T +++ I S S T RS+ ++ P ++NT+I Y
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIH 173
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ F +M K + D+ T + AC R ++ +G H+L+ G + + Y+
Sbjct: 174 AGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYM 233
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++L+ MYA C +++ A+ +F+ MP R+ V W+SMI+G+ +A+K+F M++A
Sbjct: 234 GSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGV 293
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+ ++VS+C + + G +H+Y ++GL D+++ +L++MYSKCG ++KA+
Sbjct: 294 KVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYD 353
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLG 317
+F M +++ SWT++I G A NG A+ LFA+M + G+ P+ I+F +L++CSH G
Sbjct: 354 IFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGG 413
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G +F M+ +Y I P +EHYGCMVD+LGRA L+ EA I+ MP P+AV+ RS
Sbjct: 414 LVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSL 473
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR G+V L + + + + LEP VL ++V + + W A ++ I
Sbjct: 474 LFACRTCGEV-GLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK 532
Query: 438 NKVPGCSWVKVNDGSAEE 455
K PGCS+++V DG E
Sbjct: 533 TKQPGCSFIEV-DGCVHE 549
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 153/283 (54%), Gaps = 6/283 (2%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
DN++ + R + +G +H+L K+GL SD ++ NTL+ MY++C A++V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 160 EEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+ P D VSW+++IAG++ P+ AL+ F +M + VTL++ + AC
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G+ H+ V NG E++ +G++L+ MY+KCG VE A ++F+ M ++N WT MISG
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISG 271
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
G+ AI LF M G+K D + S ++S+C +G +D G+ Y ++ +
Sbjct: 272 YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYCDIHGLGK 330
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN---AVILRSF 377
+ ++DM + G I++AY I M N VI+ F
Sbjct: 331 DISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGF 373
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 271/518 (52%), Gaps = 78/518 (15%)
Query: 15 TVHHLHQLHTLFLKTS--LDH--NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++ +L QLH L L++ DH + ++ + S + F +F+++P P +F +N
Sbjct: 45 SLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFS-NFDFALKVFSSIP-NPNVFIWN 102
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I+ + + ++I + M+ RP+ FTYP + KAC + G +H + K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161
Query: 131 GLDSDKYIGNTLLRMYAA------------------------------CKEIDVAKAVFE 160
G+ SD +I + ++MYA+ C ++ AK +F
Sbjct: 162 GIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFA 221
Query: 161 EMPV-------------------------------RDVVSWSSMIAGFVACDSPSDALKV 189
+MPV RD +SWSSM+ G+++ +AL++
Sbjct: 222 QMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEI 281
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M+ P L S+++AC+++ + G +H+Y N ++LD LGTAL++MY+K
Sbjct: 282 FQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG ++ ++VF M+E+ + +W MI GLA +GR A+ LF+K+ + +KP+ I+ +
Sbjct: 342 CGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGV 401
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L+AC+H G VD+G F M Y + P +EHYGCMVD+LGR+GL EA +I +MP +P
Sbjct: 402 LTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
NA + + LGACR HG L + +GK+LL+LEP+ YVL +++ + G +D +++
Sbjct: 462 NAAVWGALLGACRIHGN-FDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 430 VAINQKGLNKVPGCSWVKVN---------DGSAEEMSK 458
+ +G+ VPG S V +N DGS +M +
Sbjct: 521 KLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKE 558
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 258/444 (58%), Gaps = 11/444 (2%)
Query: 19 LHQLHTLFLK-----TSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
L Q+H L +S+ C I F S + + R LF+ + P +F++N++I
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQ-RPNIFSWNSMI 62
Query: 74 RAYAKTSC-SIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
R +++ S E + LF +M++ G P+ FT FV+KAC + G VH+ + K G
Sbjct: 63 RGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSG 122
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
S ++ L+ YA C++I +A VF+E+ R++V+WS+MI+G+ ++AL +F
Sbjct: 123 FGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFR 182
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+ A P+ VT+VS++SAC + + G+ +H+Y +E D+ L TALV MY+KCG
Sbjct: 183 DMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCG 242
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E+A +VF+ M K+ ++W+ MI GLA NG A+ F +M + +KP+ ++F +LS
Sbjct: 243 CIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLS 302
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC+H GLV EG+ Y+ M + I P+ME YGCMVD+L RA L+E+A ++ MP PN
Sbjct: 303 ACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNP 361
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
VI R+ L C+ + L + + + LL+LEP NY+L +++ + W+ +++
Sbjct: 362 VIWRTLLVGCKK-SKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKK 420
Query: 432 INQKGLNKVPGCSWVKVNDGSAEE 455
+ G+ VPGCS ++V DG E
Sbjct: 421 MKGMGIKAVPGCSSIEV-DGLVHE 443
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 256/440 (58%), Gaps = 5/440 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL--TSLSISLHFTRSLFNNLPVTPP 65
L+ S HL LH L+TSL N + S+ +L + L + S+F ++P
Sbjct: 16 ALLHSSPNPTHLRHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHSLSVFLHMP-HRN 74
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
++++N +I ++++ +SI LF +M PD FT P V++AC + +G SVH
Sbjct: 75 IYSWNIIIGEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHG 134
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L ++G++ ++ + L+ MY ++ A+ +F+EMP RD V W++M+AG+ + P
Sbjct: 135 LCVEMGMEKSLFVASALVFMYVTFGKVLDARVLFDEMPERDAVLWTAMLAGYAQHEEPML 194
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL VF +M A + + V ++SL+ AC L ++ G+S+H + L L + LG ALV
Sbjct: 195 ALSVFRQMVSAGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVY 254
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
Y KC + ++ +F+ M E+++ SW+ +I G +G + A+ LF +M G+KP+ ++
Sbjct: 255 FYVKCAALGYSYNLFDKMPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVT 314
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F LSAC+H G+V+ YF EM + Y + P ++HY CMVD LGRAG++E+A I M
Sbjct: 315 FLGALSACTHTGMVERAHTYF-EMMKEYGVAPELKHYACMVDCLGRAGMLEDAERFIEEM 373
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P E + +L + LG CR HG + + + K L+ LEPE +NYV+ A++ + +G ++ A
Sbjct: 374 PVEADGAVLGALLGGCRVHGNA-EVGERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDA 432
Query: 426 AELMVAINQKGLNKVPGCSW 445
++ + Q+ L+KVPGCS+
Sbjct: 433 EKVRQLMKQRKLSKVPGCSF 452
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 241/402 (59%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + R LF + P + +N++ R Y++ + +E LF E+L+ G+ PDN+T+P ++
Sbjct: 78 SMSYARHLFEAMS-EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + G +H L K+GLD + Y+ TL+ MY C+++D A+ VF+ + VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVV 196
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+++MI G+ + P++AL +F M+ PN +TL+S++S+C L ++ G+ IH YA
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ V + TAL++M++KCG ++ A +F MR K+ Q+W+ MI A++G+ ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I+F +L+ACSH G V+EG+ YF +M + I P+++HYG MVD+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L AG +E+AY I +P P ++ R L AC +H L L + + + + +L+ G +
Sbjct: 377 LSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN-LDLAEKVSERIFELDDSHGGD 435
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YV+ +++ + + W+ L + + KVPGCS ++VN+
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 252/450 (56%), Gaps = 35/450 (7%)
Query: 45 SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNF 102
S+S S+ R LF+ P + ++NTLI Y ++ E+++LF +++ G +RPD
Sbjct: 167 SVSGSMVLARRLFDESPARD-VVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEV 225
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE-- 160
T V C + + +G +H + G+ + N ++ MY C +++AK+VFE
Sbjct: 226 TMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERI 285
Query: 161 -----------------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
EMP RDV W++++AG+V +A+ +FH
Sbjct: 286 DNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+ + PN +T+V+L+SAC+ L + G +H Y + L L VALGT+LV+MY+KCG
Sbjct: 346 EMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCG 405
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+++KA +F + +KN +WT MI GLA++G + AI F +MI GL+PD I+F +LS
Sbjct: 406 NIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLS 465
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC H GLV EG+ +F M Y+++ M+HY CM+D+LGRAG ++EA ++ MP +P+A
Sbjct: 466 ACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDA 525
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
V+ + ACR HG + L + L++L+P YVL A++ + + A ++ V
Sbjct: 526 VVWGALFFACRMHGNIT-LGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVM 584
Query: 432 INQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ G+ KVPGCS +++N E + K+ +
Sbjct: 585 MRHLGVEKVPGCSCIELNGVVHEFIVKDKS 614
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 195/394 (49%), Gaps = 50/394 (12%)
Query: 55 SLFNNLPVTPPLFA--YNTLIRAYA----KTSCSIESIKLFDEML-KTGLRPDNFTYPFV 107
++ +LP +PP A YN RA + + + L+ +L + RPD+ T+PF+
Sbjct: 69 AILASLP-SPPDSASPYNAAFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFL 127
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
+KAC R G +V + K+G +D ++ N + ++ + +A+ +F+E P RDV
Sbjct: 128 LKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDV 187
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIH 225
VSW+++I G+V P +AL++F R+ ++ P+ VT++ VS C + ++ G+ +H
Sbjct: 188 VSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLH 247
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI---------- 275
+ G+ V L A+++MY KCG +E A VF + K + SWT MI
Sbjct: 248 EFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMME 307
Query: 276 ---------------------SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+G N +G AI+LF +M ++ + P+ I+ +LSACS
Sbjct: 308 DARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACS 367
Query: 315 HLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
LG ++ G +Y D + + ++ +VDM + G I++A I + +P + NA
Sbjct: 368 QLGALEMGMWVHHYIDR----HQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDK-NA 422
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLL-LKLEPE 404
+ + + NHG + +++ L L+P+
Sbjct: 423 LTWTAMICGLANHGHADEAIEYFQRMIDLGLQPD 456
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 251/431 (58%), Gaps = 5/431 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H +KT T + +R I L R + + +P + ++ +I Y++
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQ 130
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
T S E++ +F EM+++ +P+ FT+ V+ +C R +G+G +H LI K DS ++
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++LL MYA +I A+ +FE +P RDVVS +++IAG+ +AL++FHR+
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
SPN VT SL++A + L + G+ H + + L L +L++MYSKCG++ A +
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLG 317
+F+ M E+ SW M+ G + +G G + LF M + +KPD+++ A+LS CSH
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 318 LVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ D G N FD M A Y KP EHYGC+VDMLGRAG I+EA+ I+ MP++P A +L S
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H V + +++G+ L+++EPE NYV+ +++ + +G W + + QK
Sbjct: 431 LLGACRVHLSV-DIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKA 489
Query: 437 LNKVPGCSWVK 447
+ K PG SW++
Sbjct: 490 VTKEPGRSWIQ 500
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++ AC + G VH+ + K Y+ LL Y C ++ A+ V +EMP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
++VVSW++MI+ + S+AL VF M ++ PN T +++++C + G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IH V + + +G++L++MY+K G +++A ++F + E+++ S T +I+G A G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ +F ++ G+ P+ ++++++L+A S L L+D GK A + ++ + Y
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYA 289
Query: 344 C----MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
++DM + G + A + NMP E A+ + L HG LG+ +L
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG--------LGREVL 340
Query: 400 KL 401
+L
Sbjct: 341 EL 342
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 251/458 (54%), Gaps = 19/458 (4%)
Query: 3 SRHIETLIQLSKTVHHLH-----QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSL 56
SRH T L K V L Q H LK D + + + I + L F +
Sbjct: 103 SRH--TFPPLLKAVFKLRDANPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRV 160
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + ++ +I + + S+E++ F EM ++G+ + T V+KA +
Sbjct: 161 FDGTE-DKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAED 219
Query: 117 IGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G S+H + G + D +IG++L+ MY C D A+ VF+EMP R+VV+W+++IA
Sbjct: 220 VRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V + VF M ++ +PN TL S++SAC + + G +H Y + N +E+
Sbjct: 280 GYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEI 339
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ +GT L++ Y+KCG +E+A VF +REKN+ +WT MI+G A +G A+ LF M+
Sbjct: 340 NTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTML 399
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + P+ ++F +LSAC+H GLV+EG+ F M +N++P +HY CMVD+ GR GL+
Sbjct: 400 SSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLL 459
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
EEA +I MP EP + + G+C +++ D LGK ++KL+P Y L
Sbjct: 460 EEAKALIERMPMEPTNAVWGALFGSC-----LIHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ S S NWD A + + + + K PGCSW++V
Sbjct: 515 LANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVK 552
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 253/446 (56%), Gaps = 17/446 (3%)
Query: 21 QLHTLFLKTSLDHNTC---IISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNTLIRA 75
Q+H +K + H + F +LS L++ R L + P T + YNTL+RA
Sbjct: 11 QVHGQVVKLGMGHKDASRKLSKVFTFAALSPFGDLNYARLLLSTNP-TLNSYYYNTLLRA 69
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+++T L PDNFT+PF++K C R L +G +H+L+ K+G D
Sbjct: 70 FSQTPLPTPPFHALSLFLSMPSPPDNFTFPFLLKCCSRSKLPPLGKQLHALLTKLGFAPD 129
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
YI N LL MY+ ++ +A+++F+ MP RDVVSW+SMI G V D P +A+ +F RM
Sbjct: 130 LYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERMLQ 189
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA--LGTALVEMYSKCGHV 253
N T++S++ AC + G +H+ G+E+ + TALV+MY+K G +
Sbjct: 190 CGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGCI 249
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
A KVF+ + +++ WT MISGLA +G AI +F M +G+KPD + +A+L+AC
Sbjct: 250 ASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTAC 309
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+ GL+ EG F ++ R Y +KP+++H+GC+VD+L RAG ++EA + MP EP+ V+
Sbjct: 310 RNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDTVL 369
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLE-----PELGANYVLAASVSSLSGNWDTAAEL 428
R+ + AC+ HG D +L+ LE + +Y+LA++V + +G W AE+
Sbjct: 370 WRTLIWACKVHGDA----DRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKAEV 425
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAE 454
+N+KGL K PG S ++V+ G E
Sbjct: 426 RELMNKKGLVKPPGTSRIEVDGGVHE 451
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 269/508 (52%), Gaps = 69/508 (13%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTP 64
+L+ K + L Q+H LF+K +D ++ + IL S+S +L + R L P P
Sbjct: 2 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP-EP 60
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSV 123
F +NTL+R Y+++ S+ +F EM++ G + PD+F++ FV+KA + G +
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-------------------- 163
H K GL+S ++G TL+ MY C ++ A+ VF+EM
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 180
Query: 164 -----------VRDVVSWSSMIAGFVACDSPSDALKVF----HR---------------- 192
VR+ SW+ M+AG++ A ++F HR
Sbjct: 181 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 240
Query: 193 -----------MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
++ A SPN V+L ++SAC+ + G+ +H + G V++
Sbjct: 241 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 300
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKN-LQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL++MYS+CG+V A VF M+EK + SWT MI+GLA +G+G A+ LF +M G+
Sbjct: 301 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 360
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD ISF ++L ACSH GL++EG++YF EM RVY+I+P +EHYGCMVD+ GR+G +++AY
Sbjct: 361 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 420
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
I MP P A++ R+ LGAC +HG + L + + + L +L+P + VL ++ + +G
Sbjct: 421 FICQMPIPPTAIVWRTLLGACSSHGNI-ELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 479
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKV 448
W A + ++ + + K S V+V
Sbjct: 480 KWKDVASIRKSMIVQRIKKTTAWSLVEV 507
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 250/398 (62%), Gaps = 6/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACG 112
R+LF+ +P P F YN+LIRA S ++ ++ ML+ G RP++FT F +KAC
Sbjct: 129 RNLFDQIP-DPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGSPRPNSFTLAFALKACA 186
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWS 171
G G +H+ + GL + Y+ LL +YA C+++ +A+ VF+ M +++V+WS
Sbjct: 187 AVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWS 246
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+M++G+ ++AL +F M+ P+ VT+VS++SAC + G+ +H+Y
Sbjct: 247 AMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK 306
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +D+ L TAL++MY+KCG +E+A VF+ M EK+ ++W+ MI G A +G A+ LF
Sbjct: 307 GITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLF 366
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M++ ++P++++F +LSAC+H GLV++G+ Y+ M + IKP+ME+YGCMVD+L R
Sbjct: 367 SRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCR 425
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL+++AY + MP PN+VI R+ L AC++ ++ + ++ K LL+LEP NYVL
Sbjct: 426 SGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRI-DIAESATKRLLELEPHNPENYVL 484
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + WD + L + K + + G S +++N
Sbjct: 485 LSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEIN 522
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 250/398 (62%), Gaps = 6/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACG 112
R+LF+ +P P F YN+LIRA S ++ ++ ML+ G RP++FT F +KAC
Sbjct: 80 RNLFDQIP-DPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGSPRPNSFTLAFALKACA 137
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWS 171
G G +H+ + GL + Y+ LL +YA C+++ +A+ VF+ M +++V+WS
Sbjct: 138 AVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWS 197
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+M++G+ ++AL +F M+ P+ VT+VS++SAC + G+ +H+Y
Sbjct: 198 AMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK 257
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +D+ L TAL++MY+KCG +E+A VF+ M EK+ ++W+ MI G A +G A+ LF
Sbjct: 258 GITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLF 317
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M++ ++P++++F +LSAC+H GLV++G+ Y+ M + IKP+ME+YGCMVD+L R
Sbjct: 318 SRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCR 376
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL+++AY + MP PN+VI R+ L AC++ ++ + ++ K LL+LEP NYVL
Sbjct: 377 SGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRI-DIAESATKRLLELEPHNPENYVL 435
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + WD + L + K + + G S +++N
Sbjct: 436 LSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEIN 473
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 260/454 (57%), Gaps = 37/454 (8%)
Query: 31 LDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
LD N + FI L SL +++ R +F+ + + +N ++ Y + ES +LF
Sbjct: 167 LDSNLFVQKGFIHLFSLCGLVNYARKIFD-MGDGWEVVTWNVVLSGYNRFKRYEESKRLF 225
Query: 90 DEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL-DSDKYIGNTLLRMY 146
EM K + P++ T ++ AC + + G +++ K G+ + + + N L+ M+
Sbjct: 226 IEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMF 285
Query: 147 AACKEIDVAKAVFEEM-------------------------------PVRDVVSWSSMIA 175
A+C E+D A+ VF+EM P RD VSW++MI
Sbjct: 286 ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMID 345
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G++ + + L +F M+++N P+ T+VS+++AC L + GE +Y N ++
Sbjct: 346 GYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKN 405
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D +G AL++MY KCG+VEKA K+FN M++K+ +WT MI GLA+NG G A+++F+ M+
Sbjct: 406 DTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYML 465
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + PD I++ ++ AC+H+GLV +GK++F MA + IKP + HYGCMVD+LGRAG +
Sbjct: 466 EASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHL 525
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+EA +I NMP +PN+++ S LGACR H V L + +L+LEPE GA YVL ++
Sbjct: 526 KEALEVIMNMPVKPNSIVWGSLLGACRVHKNV-QLAEMAANEILELEPENGAVYVLLCNI 584
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ W + + ++G+ K+PGCS +++N
Sbjct: 585 YAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMN 618
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 222/423 (52%), Gaps = 51/423 (12%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTP 64
+L++ T++ ++Q+H+ +KT L N +++ I+ T S +++ R +F+ +P P
Sbjct: 40 SLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP-QP 98
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV- 123
+F +NT+I+ Y++ +CS + L+ ML ++PD FT+PF++K + + + G +
Sbjct: 99 SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLL 158
Query: 124 -HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H++I LDS+ ++ + +++ C ++ A+ +F+ +VV+W+ +++G+
Sbjct: 159 NHAVIHGF-LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKR 217
Query: 183 PSDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVAL 239
++ ++F M+ E SPNSVTLV ++SAC+ L ++ G+ I++ + G+ E ++ L
Sbjct: 218 YEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLIL 277
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA------------ 287
AL++M++ CG ++ A VF+ M+ +++ SWT +++G A+ R + A
Sbjct: 278 ENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDY 337
Query: 288 -------------------ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
++LF M + +KPD + +IL+AC+HLG ++ G E
Sbjct: 338 VSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELG-----E 392
Query: 329 MARVY----NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN- 383
A+ Y IK ++DM + G +E+A I M + +G N
Sbjct: 393 WAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNG 452
Query: 384 HGQ 386
HG+
Sbjct: 453 HGE 455
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 278/518 (53%), Gaps = 84/518 (16%)
Query: 14 KTVHHLHQLHTL-----FLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
+++ H+ Q+H + FL + + + + +I+ + +F+ +P P F
Sbjct: 19 RSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYL--VFDQIP-RPDRFM 75
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNFTYPFVVKACGRCLLIGIGGSVH 124
YNTLIR A T+ +++ L+ ML+ G +RPD T+PFV++AC G VH
Sbjct: 76 YNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVH 135
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAAC-------------------------------KEID 153
+ + K G +SD ++ N L+ M+A+C +I
Sbjct: 136 AHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIG 195
Query: 154 VAKAVFEEMPVRD-------------------------------VVSWSSMIAGFVACDS 182
A+ +F+E PV+D VVSW+ MI+G+V C S
Sbjct: 196 AARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGS 255
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS----YAVVNGLELDVA 238
AL++F +M+ E P+ VT++SL+SAC ++ G+ +HS NG V
Sbjct: 256 HLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFP--VV 313
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
LG AL++MY+KCG ++ A +VF MR+K++ +W ++ GLA +G +I +F KM++
Sbjct: 314 LGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGK 373
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++PD I+F A+L ACSH G+VD+G+ +F+ M Y ++P ++HYGCMVDMLGRAGL++EA
Sbjct: 374 VRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEA 433
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+ I M EPN+VI R+ L ACR HG++ L + + LLK + +YVL +++ +
Sbjct: 434 FEFIDTMKCEPNSVIWRTLLSACRVHGEI-ELAKHANRQLLKARNDESGDYVLLSNIYAS 492
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
G W + ++ ++ G+NK G ++V DGS +++
Sbjct: 493 VGEWFGSEKMRKLMDDSGVNKEAGQTFV---DGSVKDI 527
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 252/436 (57%), Gaps = 42/436 (9%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF +LP F +NT++RA+ + L+ ML TG P+N+T+ F+++AC +
Sbjct: 44 LFLSLPRRTS-FIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLS 102
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID---------------------- 153
+ G +H+ ++G ++ ++ N LL +YA+C +D
Sbjct: 103 DLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVIN 162
Query: 154 ---------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
VA+ +F+EMP ++ VSWS+MI G+ +AL++F+ M++A PN
Sbjct: 163 GYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGA 222
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+V ++AC L + G IH+Y N + LD LGTAL++MY+KCG VE A +VF+ M
Sbjct: 223 IVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEML 282
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
++++ ++T +ISGLA++G AI +F +M G+ P+ ++F +LSACS +GLV+EG
Sbjct: 283 DRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLR 342
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
F M +Y I+P ++HYGC+VD+LGRAG++E+A ++R MP EP++ +L + L ACR H
Sbjct: 343 IFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVH 402
Query: 385 GQVLYLDDNLGKLLLKLEPEL----GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
G V LGK ++ E G +VL +++ + + W+ A++ + +K + KV
Sbjct: 403 GDV-----ELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKV 457
Query: 441 PGCSWVKVNDGSAEEM 456
PGCS ++V DG+ E
Sbjct: 458 PGCSLIEV-DGAVFEF 472
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 135 DKYIGNTLLRMYAACKEIDVAKA--VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
D + ++ A + D++ A +F +P R W++M+ F P+ L ++
Sbjct: 19 DPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKY 78
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M PN+ T L+ AC L ++ G +H+ AV G E + L+ +Y+ C
Sbjct: 79 MLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNC 138
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++ A ++F+ +++ +WT +I+G A +G+ A LF +M + +++S+SA+++
Sbjct: 139 MDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE----KNAVSWSAMITG 194
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKP 337
+ +GL E F++M ++ +P
Sbjct: 195 YAQIGLFREALELFNDM-QIAGFRP 218
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 228/386 (59%), Gaps = 10/386 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I YA E++ LFD ML G RP+ T V C + + G V LI
Sbjct: 218 SWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLI 277
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L + + L+ MY C+ ID A+ F+ M RDVV+WS+MIAG+ P ++L
Sbjct: 278 GEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESL 336
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F RMK + PN VTLV ++SAC L + E I +YA L L LG+AL++MY
Sbjct: 337 ELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMY 396
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
++CGHV +A VF+ M +K + +W MI GLA NG AISL+ KM + G++P+ I+F
Sbjct: 397 TRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFV 456
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
A+L+AC+H GLVD+G +F+EM R + + P +EH C+VD+L ++G + EAY I +M
Sbjct: 457 ALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEV 516
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWD 423
EPNAVI + L +CR H V L KL LL +EP+ + YVL +++ + +G W
Sbjct: 517 EPNAVIWTTLLSSCRAHADV-----ELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWG 571
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
A E+ + K + K+ SW+K++
Sbjct: 572 DAREIRDLMRSKNVQKLSAYSWIKLD 597
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 176/398 (44%), Gaps = 66/398 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF+ +P P +T + + ++ S + ++ F M + G + P V K+C
Sbjct: 73 RNLFDAVPRPAPALC-STFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----- 168
G VH GL D ++ L+ YA +++ A +VF+EMPV+D +
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCL 191
Query: 169 --------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
SW+SMIA + +AL +F RM PN+
Sbjct: 192 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNA 251
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T+ S+ S C ++ G+ + + L+ +V + TAL+EMY KC ++ A + F+
Sbjct: 252 ITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDR 310
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG---LV 319
M ++++ +W+ MI+G A NGR ++ LF +M T +P+ ++ ++SAC+ LG LV
Sbjct: 311 MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELV 370
Query: 320 DEGKNYFD----------------------EMARVYNIKPTMEHYGC-----MVDMLGRA 352
++ NY + + R ++ ME G M+ L
Sbjct: 371 EQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMN 430
Query: 353 GLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQV 387
G E+A + M +PN + + L AC + G V
Sbjct: 431 GFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLV 468
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F+ +P S+ ++ S D L+ F M S + + +C
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMY--------------------------- 247
+ G +H +A+V GL DV + TALV+ Y
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCL 191
Query: 248 ----SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
SK G V+KA ++F+ M + SW MI+ A G A++LF +M+ G +P++
Sbjct: 192 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNA 251
Query: 304 ISFSAILSACSHLGLVDEGKNYFD 327
I+ +++ S C+ G +D GK D
Sbjct: 252 ITITSVFSICAKSGDLDTGKRVRD 275
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 226/382 (59%), Gaps = 2/382 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I A+ S ++ L DEM K LRPD T +V AC + + G +HS
Sbjct: 180 WNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYS 239
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++GLD + + N +L MY C +I+ A+ VF + +DV+SW+SM++G +AL
Sbjct: 240 KELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F +M+L + +TLV ++SAC + G+ IH + D+ L TALV+MY
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMY 359
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG ++ A +VF MR +N+ +W +I GLA +G G AISLF +M L PD ++F
Sbjct: 360 AKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFI 419
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
A+L ACSH GLVDEG F M + I+P MEHYGC+VD+L RA +++A I NMP
Sbjct: 420 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 479
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+ N+V+ + LGACR+ G L + +G+ +++LEP+ YV+ +++ + WD A +
Sbjct: 480 KANSVLWATLLGACRSGGH-FDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
L + KG+ K PGCSW+++N
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELN 560
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 200/370 (54%), Gaps = 7/370 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q H L L+T L HN S+ F+ S S L++ R LF + P F NT+IR YA
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQ-NPDPFICNTMIRGYA 87
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++ E++ L+ M++ G+ DN+TYPFV+ AC R + +G H + K G SD +
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLA 196
+ N L++ Y C A VF+E VRDVV+W+ MI + A + M KL
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ VT+VSLV AC L N+ G+ +HSY+ GL+ ++ + A+++MY KC +E A
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VFN +REK++ SWT M+SGLA +G A++LF KM ++ D I+ +LSAC+
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
G +D+GK Y + + I + +VDM + G I+ A + R M N +
Sbjct: 328 GALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNA 385
Query: 377 FLGACRNHGQ 386
+G HG
Sbjct: 386 LIGGLAMHGH 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +FN + + ++ +++ AK+ E++ LF +M + D T V+ AC +
Sbjct: 268 QEVFNRIR-EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H LI K ++ D + L+ MYA C ID+A VF M VR+V +W+++
Sbjct: 327 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 386
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G DA+ +F +M+ P+ VT ++L+ AC+ V G ++ A+ N
Sbjct: 387 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKF 445
Query: 234 ELDVALG--TALVEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
+++ + +V++ + V+ A + N+ + N W ++ G + A +
Sbjct: 446 QIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 505
Query: 291 FAKMIQTGLKPDSISFSAILS 311
++I+ L+PDS +LS
Sbjct: 506 GRRVIE--LEPDSCGRYVMLS 524
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 231/404 (57%), Gaps = 4/404 (0%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F N P P +YN LI + + ++ F M + GL PD F + V+ C
Sbjct: 157 SVFTNTP-EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTT 215
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +H K+ LDS +IGN ++ MY+ I A+ F + +DV+SW+++I
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Query: 175 AGFVACDSPSDALKVF-HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
A CD + L+VF H + N P+ T S ++AC L ++ G+ IH++ + L
Sbjct: 276 AACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRL 335
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D+ +G ALV MY+KCG + A+ +F+ M NL SW +I+G ++G G A+ LF +
Sbjct: 336 YQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQ 395
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M +G++PDS++F +L+AC+H GLVD+G+ YF+ M Y I P +EH+ C++DMLGRAG
Sbjct: 396 MNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAG 455
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ EA +R P + V+L S L A R HG V+ + + L K LLKL+P + YVL +
Sbjct: 456 RLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVV-IGERLAKWLLKLQPVTTSPYVLLS 514
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
++ + G WD+ AE + GL K PG S ++VN GS E+ +
Sbjct: 515 NLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVN-GSVEKFT 557
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 201/441 (45%), Gaps = 41/441 (9%)
Query: 12 LSKTVHHLHQ---------LHTLFLKTSLDHNTCIISRFILTSLSISLH--FTRSLFNNL 60
LS +HH + LH LKT + +S +L + H F R +F+ +
Sbjct: 6 LSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDV-FMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
L +++ +I Y + +I L+ +M L P+ + + V+ AC + +G
Sbjct: 65 -FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+HS K G +S ++ N+L+ MY C + A +VF P + VS++++I GFV
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
L+ F M+ P+ + ++ CT+ N++ G +H V L+ +G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA---DNGRGNYAISLFAKMI-Q 296
++ MYS+ +++A K F L+ EK++ SW +I+ + D+ +G + +F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKG---LRVFKHMTEE 297
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
T ++PD +F++ L+AC+ L + GK + R + + +V+M + G I
Sbjct: 298 TNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT-RLYQDLGVGNALVNMYAKCGCIG 356
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
AY I M N V + + NHG LG+ ++L ++ A+ + SV+
Sbjct: 357 YAYDIFSKM-VHHNLVSWNTIIAGFGNHG--------LGERAVELFEQMNASGIRPDSVT 407
Query: 417 SLSGNWDTAAELMVAINQKGL 437
+ L+ A N GL
Sbjct: 408 FIG--------LLTACNHAGL 420
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TL SL+ C+ +R G S+H+ + G + DV + ++ MY+KCGH A +VF+ M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
EKNL SW+ MISG G AI L+++M L P+ F++++SAC+ L V G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
+ + + ++ M + +A + N P EPN V
Sbjct: 122 KIHSRSLK-FGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCV 168
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 241/401 (60%), Gaps = 9/401 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ LF+ +P + ++ T+I AY+K ++++L ML+ G+RP+ +TY V++
Sbjct: 64 LNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + + +H I K GL+SD Y+ + L+ ++A E + A +VF+EM D +
Sbjct: 123 ACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179
Query: 170 WSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+S+I GF A +S SD AL++F RMK A TL S++ ACT L + G H +
Sbjct: 180 WNSIIGGF-AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 238
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V + D+ L ALV+MY KCG +E A +VFN M+E+++ +W+ MISGLA NG A+
Sbjct: 239 V--KYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEAL 296
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF M +G KP+ I+ +L ACSH GL+++G YF M ++Y I P EHYGCM+D+
Sbjct: 297 KLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDL 356
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LG+AG +++A ++ M EP+AV R+ LGACR ++ L + K ++ L+PE
Sbjct: 357 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV-LAEYAAKKVIALDPEDAGT 415
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y + +++ + S WD+ E+ + G+ K PGCSW++VN
Sbjct: 416 YTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVN 456
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+S T L+ C S V G I + NG + + L L+ MY K + A ++F
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS------ 314
+ M ++N+ SWT MIS + A+ L M++ G++P+ ++S++L AC+
Sbjct: 72 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR 131
Query: 315 --HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
H G++ EG ++ + ++D+ + G E+A + M T +A+
Sbjct: 132 MLHCGIIKEG------------LESDVYVRSALIDVFAKLGEPEDALSVFDEMVT-GDAI 178
Query: 373 ILRSFLGA 380
+ S +G
Sbjct: 179 VWNSIIGG 186
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 260/435 (59%), Gaps = 7/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+ ++ L + C+ + + + S+ +R +F +P + ++ +I AY
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAY 310
Query: 77 AKT-SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ C E+I+LF +M+ +RP++F++ V+KACG G V+S K+G+ S
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 370
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN+L+ MYA ++ A+ F+ + +++VS+++++ G+ +A +F+ +
Sbjct: 371 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 430
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
++ T SL+S S+ + GE IH + G + + + AL+ MYS+CG++E
Sbjct: 431 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 490
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF+VFN M ++N+ SWT MI+G A +G A+ +F KM++TG KP+ I++ A+LSACSH
Sbjct: 491 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 550
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+G++ EG+ +F+ M + + I P MEHY CMVD+LGR+GL+ EA I +MP +A++ R
Sbjct: 551 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 610
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR HG L + +++L+ EP+ A Y+L +++ + +G W ++ ++ ++
Sbjct: 611 TLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 669
Query: 436 GLNKVPGCSWVKVND 450
L K GCSW++V +
Sbjct: 670 NLIKEAGCSWIEVEN 684
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 22/360 (6%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
QL K VH +++ L+ ++ +++ I L S R +F + L +
Sbjct: 42 FQLGKLVHRK------LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVS 95
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ ++ +A S ++I F +ML+ G P+ + + V++AC +G ++ +
Sbjct: 96 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 155
Query: 129 KVG-LDSDKYIGNTLLRMYA-ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G L++D +G L+ M+ ++ A VF++MP R++V+W+ MI F DA
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 215
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F M+L+ P+ T S++SACT L + G+ +HS + GL LDV +G +LV+M
Sbjct: 216 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275
Query: 247 YSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY-AISLFAKMIQTGLKPD 302
Y+KC G V+ + KVF M E N+ SWT +I+ +G + AI LF KMI ++P+
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 335
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLIEEA 358
SFS++L AC +L Y E Y +K + C ++ M R+G +E+A
Sbjct: 336 HFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 152/286 (53%), Gaps = 11/286 (3%)
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
D M + PD TY ++K+C R +G VH + + GL+ D + NTL+ +Y+
Sbjct: 14 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73
Query: 149 CKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C + + A+ +FE M RD+VSWS+M++ F A+ F M PN +
Sbjct: 74 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 133
Query: 208 LVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSK-CGHVEKAFKVFNLMRE 265
++ AC++ GE I+ + V G LE DV +G L++M+ K G + A+KVF+ M E
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 193
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+NL +WT+MI+ A G AI LF M +G PD ++S++LSAC+ LGL+ GK
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253
Query: 326 FDEMARVYNIKPTME-HYGC-MVDMLGRA---GLIEEAYHIIRNMP 366
+RV + ++ GC +VDM + G ++++ + MP
Sbjct: 254 H---SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 10/217 (4%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A M N P+ T L+ +C N + G+ +H + +GLELD + L+
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 246 MYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+YSKCG E A +F M +++L SW+ M+S A+N AI F M++ G P+
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGR-AGLIEEAYHII 362
F+A++ ACS+ G+ + + + ++ + GC ++DM + +G + AY +
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYKVF 188
Query: 363 RNMPTEPNAV-----ILRSFLGACRNHGQVLYLDDNL 394
MP E N V I R C L+LD L
Sbjct: 189 DKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 224
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 250/436 (57%), Gaps = 7/436 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYAK 78
Q+H LK LD + + S +L + + FT L F+ +P + ++N++I A +
Sbjct: 509 QIHCDGLKLGLDTDVSV-SNALLALYAETGCFTECLKVFSLMPEYDQV-SWNSVIGALSD 566
Query: 79 TSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S+ +++K F +M++ G T+ ++ A L + +H+L+ K L D
Sbjct: 567 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 626
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
IGN LL Y C E++ + +F M RD VSW+SMI+G++ + A+ + M
Sbjct: 627 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 686
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ +S T +++SAC S+ + G +H+ + LE DV +G+ALV+MYSKCG ++ A
Sbjct: 687 GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 746
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+ F LM +N+ SW MISG A +G G A+ LF +M+ G PD ++F +LSACSH+
Sbjct: 747 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 806
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
G V+EG +F M+ VY + P +EH+ CMVD+LGRAG ++E I +MP +PN +I R+
Sbjct: 807 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 866
Query: 377 FLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
LGA CR +G+ L ++LL+LEP+ NYVL A++ + W+ A+ A+ +
Sbjct: 867 VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEA 926
Query: 436 GLNKVPGCSWVKVNDG 451
+ K GCSWV + DG
Sbjct: 927 AVKKEAGCSWVTMKDG 942
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 173/374 (46%), Gaps = 15/374 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILT--SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H ++T L+ N I ++ + S ++ S+F L V ++N+LI +
Sbjct: 407 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLISGLDQ 465
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
CS ++ + F M +TG P NFT + +C I +G +H K+GLD+D +
Sbjct: 466 NECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSV 525
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD-SPSDALKVFHRMKLAN 197
N LL +YA VF MP D VSW+S+I + S S A+K F +M
Sbjct: 526 SNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG 585
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ VT ++++SA +SL IH+ + L D A+G AL+ Y KCG + +
Sbjct: 586 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 645
Query: 258 KVFNLMRE-KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
K+F M E ++ SW MISG N + A+ L M+Q G + DS +F+ ILSAC+ +
Sbjct: 646 KIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASV 705
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
++ G I+ +E +VDM + G I+ A MP N
Sbjct: 706 ATLERGME-----VHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVY 759
Query: 373 ILRSFLGACRNHGQ 386
S + HG
Sbjct: 760 SWNSMISGYARHGH 773
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 159/320 (49%), Gaps = 21/320 (6%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H L KT + + + I S S + RS+F+ + + + ++N++I Y++
Sbjct: 195 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSI-SWNSIISVYSR 253
Query: 79 TSCSIESIKLFDEMLKTGL----RPDNFTY-PFVVKAC-----GRCLLIGIGGSVHSLIF 128
++ + LF M K GL +P+ +T+ + AC G C+L + V
Sbjct: 254 RGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVE---- 309
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D Y+ + L+ +A D AK +FE+M VR+VVS + ++ G V A K
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369
Query: 189 VFHRMK--LANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNGL-ELDVALGTALV 244
VFH MK + S + V L+S S + L R G +H++ + GL + VA+G LV
Sbjct: 370 VFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+K G + A VF LM EK+ SW +ISGL N A F +M +TG P +
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489
Query: 305 SFSAILSACSHLGLVDEGKN 324
+ + LS+C+ LG + G+
Sbjct: 490 TLISTLSSCASLGWIMLGEQ 509
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 2/201 (0%)
Query: 120 GGSVHSLIFKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH+ + + GL+ +K IGN L+ MYA I A +VFE M +D VSW+S+I+G
Sbjct: 405 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 464
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ DA + FHRM+ P++ TL+S +S+C SL + GE IH + GL+ DV+
Sbjct: 465 QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 524
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG-NYAISLFAKMIQT 297
+ AL+ +Y++ G + KVF+LM E + SW +I L+D+ + A+ F +M++
Sbjct: 525 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRG 584
Query: 298 GLKPDSISFSAILSACSHLGL 318
G ++F ILSA S L L
Sbjct: 585 GWGLSRVTFINILSAVSSLSL 605
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
HQ+H L LK L +T I + + ++ +F + T ++N++I Y
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 669
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+++ L M++ G R D+FT+ ++ AC + G VH+ + L+SD +
Sbjct: 670 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVV 729
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G+ L+ MY+ C ID A FE MP+R+V SW+SMI+G+ ALK+F RM L +
Sbjct: 730 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 789
Query: 199 SPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ VT V ++SAC+ + V G E S + V L V + +V++ + G +++
Sbjct: 790 PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 849
Query: 258 KVFNLMREK-NLQSW-TIMISGLADNGR 283
N M K N+ W T++ + NGR
Sbjct: 850 DFINSMPMKPNVLIWRTVLGACCRANGR 877
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 132/268 (49%), Gaps = 12/268 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG--IGGSV 123
L + LI Y + E+ F +M++ G P+++ + ++AC G +G +
Sbjct: 137 LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 196
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H LI K SD + N L+ MY +C + A++VF+ + +R+ +SW+S+I+ +
Sbjct: 197 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGD 256
Query: 183 PSDALKVFHRMKLA----NESPNSVTLVSLV-SACTSL-INVRAGESIHSYAVVNGLELD 236
A +F M+ + PN T SL+ +AC+S+ + E + + +G D
Sbjct: 257 AVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQD 316
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ + +ALV +++ G + A +F M +N+ S ++ GL +G A +F +M
Sbjct: 317 LYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD 376
Query: 297 -TGLKPDSISFSAILSACSHLGLVDEGK 323
G+ D S+ +LSA S +++EG+
Sbjct: 377 LVGINSD--SYVVLLSAFSEFSVLEEGR 402
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 14/254 (5%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H K G + ++ NTL+ +Y ++ A+ +F+EM R++V+W+ +I+G+
Sbjct: 93 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 152
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSAC--TSLINVRAGESIHSYAVVNGLELDVALG 240
P +A F M A PN S + AC + + G IH DV +
Sbjct: 153 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 212
Query: 241 TALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
L+ MY C A VF+ + +N SW +IS + G A LF+ M + GL
Sbjct: 213 NVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGL 272
Query: 300 ----KPDSISF-SAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHY--GCMVDMLGR 351
KP+ +F S I +ACS VD G ++M ARV + Y +V R
Sbjct: 273 GFSFKPNEYTFGSLITTACSS---VDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 352 AGLIEEAYHIIRNM 365
GL ++A +I M
Sbjct: 330 FGLTDDAKNIFEQM 343
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 202 SVTLVSLVSACTSLINVRAG-------ESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ TL S SLIN G +H ++ G ++ L L+ +Y + G +
Sbjct: 64 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 123
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A K+F+ M +NL +W +ISG NG+ + A + F M++ G P+ +F + L AC
Sbjct: 124 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 183
Query: 315 HLG 317
G
Sbjct: 184 ESG 186
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 230/401 (57%), Gaps = 6/401 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ +P + L +N +I Y+K +SI LF ++ + G+ D +TY V+
Sbjct: 197 ARKVFDGMP-SRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFA 255
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ VHSLI + G SD++ N L+ +Y+ C + A +FEE+P +DVVSW+
Sbjct: 256 ARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTV 315
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I GF+ +A+ +F++M+L + PNS T L+ AC + G H + G
Sbjct: 316 IIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFG 375
Query: 233 L-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
L DV +G+A+V+MYSKCG + A + F M E+++ SW +I G A NG G A+ L+
Sbjct: 376 LLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLY 435
Query: 292 AKMI---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+M+ +G+ P+ ++F +L ACSH GL+ EG +YF EM + IKPT EHY CMVD+
Sbjct: 436 NEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDL 495
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAGL++EA +I +P +P+ V+ + LGAC+ HG V + + L EP +N
Sbjct: 496 LGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDV-QMTRRTAEHLYTNEPRNSSN 554
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
YVL A+ + G W A E+ + +G+ K GCSWV++
Sbjct: 555 YVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIG 595
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 36/351 (10%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFD---------------- 90
S +L L + +P P + +YNT++ Y K E+IKLFD
Sbjct: 63 SQALSDAHKLLHFMP-QPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSG 121
Query: 91 ---------------EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+M + +RPDNFTY ++ C +G G VH+ I KV D D
Sbjct: 122 CVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLD 177
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+IG LLRMYA EI A+ VF+ MP R +V+W++MI+ + ++ +F ++
Sbjct: 178 AFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXR 237
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
S + T +++ + V +HS + G D ALV +YSKCG+V
Sbjct: 238 EGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVAS 297
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A ++F + ++++ SWT++I G +G A+ LF +M ++P+S +F +L AC+
Sbjct: 298 ASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACAD 357
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+G+++ + + + + +VDM + G + +A + MP
Sbjct: 358 ANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 252/436 (57%), Gaps = 5/436 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H +K LD + + + + L + + + + +F +P + ++N+ I A A
Sbjct: 476 QQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQV-SWNSFIGALAT 534
Query: 79 TSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S+ ++IK F EM++ G +P+ T+ ++ A L+ +G +H+LI K + D
Sbjct: 535 SEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNA 594
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
I NTLL Y C++++ + +F M RD VSW++MI+G++ A+ + M
Sbjct: 595 IENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQK 654
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ + TL +++SAC S+ + G +H+ A+ LE +V +G+ALV+MY+KCG ++ A
Sbjct: 655 GQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYA 714
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+ F LM +N+ SW MISG A +G G A+ LF +M Q G PD ++F +LSACSH+
Sbjct: 715 SRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHV 774
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLVDEG +F M VY + P +EH+ CMVD+LGRAG +++ I+ MP PNA+I R+
Sbjct: 775 GLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRT 834
Query: 377 FLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
LGA CR + + L K+L++LEP NYVL +++ + G W+ E +A+
Sbjct: 835 ILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNA 894
Query: 436 GLNKVPGCSWVKVNDG 451
+ K GCSWV + DG
Sbjct: 895 EVKKEAGCSWVTMKDG 910
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 167/347 (48%), Gaps = 19/347 (5%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNF 102
S S+ R +F + + ++N++I Y + +I + KLF M + RP+ +
Sbjct: 191 SASIDDARRVFEEIKMKTSA-SWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEY 249
Query: 103 TYPFVVKACGRCLLIGIG----GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
T+ +V C L+ G + + I K D Y+G+ L+ +A ID AK +
Sbjct: 250 TFCSLVTVA--CSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMI 307
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
FE+M R+ V+ + ++ G +A K+F MK E N+ + L+SA T N+
Sbjct: 308 FEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVE-INASSYAVLLSAFTEFSNL 366
Query: 219 ----RAGESIHSYAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
R G+ +H+Y + N L ++ + +G ALV +Y+KC ++ A +F LM K+ SW
Sbjct: 367 KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNS 426
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+ISGL N R A++ F M + G+ P S + LS+C+ LG + G+ E +
Sbjct: 427 IISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKC- 485
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+ + ++ + +EE + MP E + V SF+GA
Sbjct: 486 GLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP-EYDQVSWNSFIGA 531
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 13/340 (3%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
RS+F +P + ++N++I E++ F M + G+ P F+ + +C
Sbjct: 409 ARSIFQLMP-SKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
I +G +H K GLD D + N LL +YA ++ + VF MP D VSW+S
Sbjct: 468 SLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNS 527
Query: 173 MIAGFVACD-SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
I + S A+K F M A PN VT ++++SA +SL + G IH+ + +
Sbjct: 528 FIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKH 587
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ-SWTIMISGLADNGRGNYAISL 290
+ D A+ L+ Y KC +E +F+ M E+ + SW MISG NG + A+ L
Sbjct: 588 SVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGL 647
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMV 346
M+Q G + D + + +LSAC+ + ++ G I+ +E +V
Sbjct: 648 VWLMMQKGQRLDDFTLATVLSACASVATLERGME-----VHACAIRACLEAEVVVGSALV 702
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
DM + G I+ A MP N S + HG
Sbjct: 703 DMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGH 741
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 120 GGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH+ + + L D IGN L+ +YA C ID A+++F+ MP +D VSW+S+I+G
Sbjct: 373 GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ +A+ FH M+ P+ +++S +S+C SL + G+ IH + GL+LDV+
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN-YAISLFAKMIQT 297
+ AL+ +Y++ +E+ KVF LM E + SW I LA + AI F +M+Q
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552
Query: 298 GLKPDSISF 306
G KP+ ++F
Sbjct: 553 GWKPNRVTF 561
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 24/374 (6%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
S TV HQLH KT L + +++ F+ +S + LF+ +P L +
Sbjct: 52 SCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVS---AQKLFDEMP-QKNLVS 107
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC--LLIGIGGSVHSL 126
++ L+ YA+ E+ LF ++ GL P+++ ++AC ++ +G +H L
Sbjct: 108 WSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGL 167
Query: 127 IFKVGLDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K SD + N L+ MY+ C ID A+ VFEE+ ++ SW+S+I+ +
Sbjct: 168 ISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAIS 227
Query: 186 ALKVFHRMKLA----NESPNSVTLVSLVSACTSLIN--VRAGESIHSYAVVNGLELDVAL 239
A K+F M+ N PN T SLV+ SL++ + E + + + D+ +
Sbjct: 228 AFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYV 287
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G+ALV +++ G ++ A +F M ++N + ++ GLA +G A +F +M + +
Sbjct: 288 GSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLV 346
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY-----GCMVDMLGRAGL 354
+ ++ S++ +LSA + + EGK E+ Y I+ + +V++ +
Sbjct: 347 EINASSYAVLLSAFTEFSNLKEGKRKGQEV-HAYLIRNALVDVWILIGNALVNLYAKCNA 405
Query: 355 IEEAYHIIRNMPTE 368
I+ A I + MP++
Sbjct: 406 IDNARSIFQLMPSK 419
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H I+K GL SD + NTL+ ++ + A+ +F+EMP +++VSWS +++G+
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN--VRAGESIHSYAVVNGLELDVAL 239
P +A +F + A PN + S + AC L ++ G IH + D+ L
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179
Query: 240 GTALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM---- 294
L+ MYS C ++ A +VF ++ K SW +IS G A LF+ M
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239
Query: 295 IQTGLKPDSISFSAILS-ACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHY--GCMVDMLG 350
+ +P+ +F ++++ ACS LVD G ++M AR+ + Y +V
Sbjct: 240 TELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFL-GACRNH 384
R GLI+ A I M + NAV + + G R H
Sbjct: 297 RYGLIDSAKMIFEQMD-DRNAVTMNGLMVGLARQH 330
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 231/404 (57%), Gaps = 4/404 (0%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F N P P +YN LI + + ++ F M + GL PD F + V+ C
Sbjct: 157 SVFTNTP-EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTT 215
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +H K+ LDS +IGN ++ MY+ I A+ F + +DV+SW+++I
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Query: 175 AGFVACDSPSDALKVF-HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
A CD + L+VF H + N P+ T S ++AC L ++ G+ IH++ + L
Sbjct: 276 AACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRL 335
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D+ +G ALV MY+KCG + A+ +F+ M NL SW +I+G ++G G A+ LF +
Sbjct: 336 YQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQ 395
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M +G++PDS++F +L+AC+H GLVD+G+ YF+ M Y I P +EH+ C++DMLGRAG
Sbjct: 396 MNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAG 455
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ EA +R P + V+L S L A R HG V+ + + L K LLKL+P + YVL +
Sbjct: 456 RLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVV-IGERLAKWLLKLQPVTTSPYVLLS 514
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
++ + G WD+ AE + GL K PG S ++VN GS E+ +
Sbjct: 515 NLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVN-GSVEKFT 557
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 201/441 (45%), Gaps = 41/441 (9%)
Query: 12 LSKTVHHLHQ---------LHTLFLKTSLDHNTCIISRFILTSLSISLH--FTRSLFNNL 60
LS +HH + LH LKT + +S +L + H F R +F+ +
Sbjct: 6 LSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDV-FMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
L +++ +I Y + +I L+ +M L P+ + + V+ AC + +G
Sbjct: 65 -FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+HS K G +S ++ N+L+ MY C + A +VF P + VS++++I GFV
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
L+ F M+ P+ + ++ CT+ N++ G +H V L+ +G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA---DNGRGNYAISLFAKMI-Q 296
++ MYS+ +++A K F L+ EK++ SW +I+ + D+ +G + +F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKG---LRVFKHMTEE 297
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
T ++PD +F++ L+AC+ L + GK + R + + +V+M + G I
Sbjct: 298 TNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT-RLYQDLGVGNALVNMYAKCGCIG 356
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
AY I M N V + + NHG LG+ ++L ++ A+ + SV+
Sbjct: 357 YAYDIFSKM-VHHNLVSWNTIIAGFGNHG--------LGERAVELFEQMNASGIRPDSVT 407
Query: 417 SLSGNWDTAAELMVAINQKGL 437
+ L+ A N GL
Sbjct: 408 FIG--------LLTACNHAGL 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TL SL+ C+ +R G S+H+ + G + DV + ++ MY+KCGH A +VF+ M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
EKNL SW+ MISG G AI L+++M L P+ F++++SAC+ L V G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
+ + + ++ M + +A + N P EPN V
Sbjct: 122 KIHSRSLK-FGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCV 168
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 270/518 (52%), Gaps = 78/518 (15%)
Query: 15 TVHHLHQLHTLFLKTS--LDH--NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++ +L QLH L L++ DH + ++ + S + F +F+++P P +F +N
Sbjct: 45 SLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFS-NFDFALKVFSSIP-NPNVFIWN 102
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I+ + + ++I + M+ RP+ FTYP + KAC + G +H + K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161
Query: 131 GLDSDKYIGNTLLRMYAA------------------------------CKEIDVAKAVFE 160
G+ SD +I + + MYA+ C ++ AK +F
Sbjct: 162 GIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFA 221
Query: 161 EMPV-------------------------------RDVVSWSSMIAGFVACDSPSDALKV 189
+MPV RD +SWSSM+ G+++ +AL++
Sbjct: 222 QMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEI 281
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M+ P L S+++AC+++ + G +H+Y N ++LD LGTAL++MY+K
Sbjct: 282 FQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG ++ ++VF M+E+ + +W MI GLA +GR A+ LF+K+ + +KP+ I+ +
Sbjct: 342 CGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGV 401
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L+AC+H G VD+G F M Y + P +EHYGCMVD+LGR+GL EA +I +MP +P
Sbjct: 402 LTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
NA + + LGACR HG L + +GK+LL+LEP+ YVL +++ + G +D +++
Sbjct: 462 NAAVWGALLGACRIHGN-FDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 430 VAINQKGLNKVPGCSWVKVN---------DGSAEEMSK 458
+ +G+ VPG S V +N DGS +M +
Sbjct: 521 KLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKE 558
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 235/394 (59%), Gaps = 2/394 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ LP + + LI YA+ +++L ++M + + P+ TY +++ C L
Sbjct: 254 IFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPL 312
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G VH I + G + ++ N L+ MY C + A+ +F ++P RDVV+W++M+
Sbjct: 313 ALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVT 372
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ +A+ +F RM+ P+ +T S +++C+S ++ G+SIH V G L
Sbjct: 373 GYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV L +ALV MY+KCG ++ A VFN M E+N+ +WT MI+G A +GR A+ F +M
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK 492
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G+KPD ++F+++LSAC+H+GLV+EG+ +F M Y IKP +EHY C VD+LGRAG +
Sbjct: 493 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
EEA ++I MP +P + + L ACR H V + + +LKL+P+ YV +++
Sbjct: 553 EEAENVILTMPFQPGPSVWGALLSACRIHSDV-ERGERAAENVLKLDPDDDGAYVALSNI 611
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ +G ++ A ++ + ++ + K PG SW++V+
Sbjct: 612 YAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 645
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 208/375 (55%), Gaps = 6/375 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
+++ ++H LK+ + N + + + + + SL R +F+ + + ++ +
Sbjct: 110 RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR-DRNIVSWTAM 168
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I A+ + ++E+ K ++ M G +PD T+ ++ A L+ +G VH I K GL
Sbjct: 169 IEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGL 228
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ + +G +L+ MYA C +I A+ +F+++P ++VV+W+ +IAG+ AL++ +
Sbjct: 229 ELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEK 288
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ A +PN +T S++ CT+ + + G+ +H Y + +G ++ + AL+ MY KCG
Sbjct: 289 MQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGG 348
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+++A K+F + +++ +WT M++G A G + AI LF +M Q G+KPD ++F++ L++
Sbjct: 349 LKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTS 408
Query: 313 CSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
CS + EGK+ ++ Y++ ++ +V M + G +++A ++ N +E N
Sbjct: 409 CSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDA-RLVFNQMSERNV 465
Query: 372 VILRSFLGACRNHGQ 386
V + + C HG+
Sbjct: 466 VAWTAMITGCAQHGR 480
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 146/241 (60%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
E++ + + M+ G R + + +++ C R + G VH+ I K G+ ++Y+ NTLL
Sbjct: 79 EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
MYA C + A+ VF+ + R++VSW++MI FVA + +A K + MKLA P+ V
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T VSL++A T+ ++ G+ +H GLEL+ +GT+LV MY+KCG + KA +F+ +
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
EKN+ +WT++I+G A G+ + A+ L KM Q + P+ I++++IL C+ ++ GK
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318
Query: 324 N 324
Sbjct: 319 K 319
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL + + M L S L+ C L ++ G +H+ + +G++ + L L+
Sbjct: 79 EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + A +VF+ +R++N+ SWT MI + A + M G KPD +
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+F ++L+A ++ L+ G+ E+A+ ++P + +V M + G I +A I
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFD 256
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP-ELGANYVLAASV 415
+P E N V + GQV D +LL K++ E+ N + S+
Sbjct: 257 KLP-EKNVVTWTLLIAGYAQQGQV----DVALELLEKMQQAEVAPNKITYTSI 304
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 233/400 (58%), Gaps = 11/400 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + ++N++I YA E++ LFD ML G RP+ T V C +
Sbjct: 156 RRLFDGMERRTSA-SWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAK 214
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G V LI + L + + L+ MY C+ ID A+ F+ M RDVV+WS+M
Sbjct: 215 SGDLDTGKRVRDLIGEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTM 273
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ P ++L++F RMK + PN VTLV ++SAC L + E I +YA L
Sbjct: 274 IAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRL 333
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
L LG+AL++MY++CGHV +A VF+ M +K + +W MI GLA NG AISL+ K
Sbjct: 334 PLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEK 393
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G++P+ I+F A+L+AC+H GLVD+G +F+EM R + + P +EH C+VD+L ++G
Sbjct: 394 MAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSG 453
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+ EAY I +M EPNAVI + L +CR H V L KL LL +EP+ + Y
Sbjct: 454 GLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADV-----ELAKLASRKLLAMEPDNSSIY 508
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
VL +++ + +G W A E+ + K + K+ SW+K++
Sbjct: 509 VLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLD 548
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 175/398 (43%), Gaps = 66/398 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF+ +P P +T + + ++ S + ++ F M + G + P V K+C
Sbjct: 24 RNLFDAVPRPAPALC-STFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----- 168
G VH GL D ++ L+ YA +++ A + F+EMPV+D +
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCL 142
Query: 169 --------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
SW+SMIA + +AL +F RM PN+
Sbjct: 143 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNA 202
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T+ S+ S C ++ G+ + + L+ +V + TAL+EMY KC ++ A + F+
Sbjct: 203 ITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDR 261
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG---LV 319
M ++++ +W+ MI+G A NGR ++ LF +M T +P+ ++ ++SAC+ LG LV
Sbjct: 262 MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELV 321
Query: 320 DEGKNYFD----------------------EMARVYNIKPTMEHYGC-----MVDMLGRA 352
++ NY + + R ++ ME G M+ L
Sbjct: 322 EQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMN 381
Query: 353 GLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQV 387
G E+A + M +PN + + L AC + G V
Sbjct: 382 GFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLV 419
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F+ +P S+ ++ S D L+ F M S + + +C
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEM---------------------------- 246
+ G +H +A+V GL DV + TALV+
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCL 142
Query: 247 ---YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
YSK G V+KA ++F+ M + SW MI+ A G A++LF +M+ G +P++
Sbjct: 143 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNA 202
Query: 304 ISFSAILSACSHLGLVDEGKNYFD 327
I+ +++ S C+ G +D GK D
Sbjct: 203 ITITSVFSICAKSGDLDTGKRVRD 226
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 233/401 (58%), Gaps = 3/401 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S ++ +F +P + ++ LI + +++F++ML G P+ +T+ ++
Sbjct: 241 SANYACKVFGEIP-ERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISIL 298
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
++C + +G VH+ I K LD + ++G L+ MYA + ++ A+ +F + RD+
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLF 358
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W+ ++AG+ A+K F +M+ PN TL S +S C+ + + +G +HS A
Sbjct: 359 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 418
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ G D+ + +ALV+MY+KCG VE A VF+ + ++ SW +I G + +G+G A+
Sbjct: 419 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKAL 478
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
F M+ G PD ++F +LSACSH+GL++EGK +F+ ++++Y I PT+EHY CMVD+
Sbjct: 479 KAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDI 538
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG E I M N +I + LGAC+ HG + + + K L +LEPE+ +N
Sbjct: 539 LGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMK-LFELEPEIDSN 597
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y+L +++ + G WD + ++ +G+ K PGCSWV+VN
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 638
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 193/370 (52%), Gaps = 3/370 (0%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
H+ +H K + + I + F+ + F + L + N L+ +
Sbjct: 107 HYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGF 166
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
T + ++ ++L G P+ +T+ ++K C + G ++H + K G++ D
Sbjct: 167 CDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDS 226
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ N+L+ +YA C + A VF E+P RDVVSW+++I GFVA + L++F++M
Sbjct: 227 HLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQMLAE 285
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+PN T +S++ +C+SL +V G+ +H+ V N L+ + +GTALV+MY+K +E A
Sbjct: 286 GFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 345
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+FN + +++L +WT++++G A +G+G A+ F +M + G+KP+ + ++ LS CS +
Sbjct: 346 ETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI 405
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+D G+ MA M +VDM + G +E+A ++ + + V +
Sbjct: 406 ATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNT 463
Query: 377 FLGACRNHGQ 386
+ HGQ
Sbjct: 464 IICGYSQHGQ 473
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 157/318 (49%), Gaps = 5/318 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R + +P+ + +N + + E+++LF M T +R + F + ++
Sbjct: 39 SLQCARQVLEEMPIQD-VQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLI 97
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
A G S+H+ + K G +SD I N + MY + ++ F+ M + ++
Sbjct: 98 SAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLA 157
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
S +++++GF ++ ++ ++ + PN T +S++ C S ++ G++IH
Sbjct: 158 SRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQV 217
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +G+ D L +LV +Y+KCG A KVF + E+++ SWT +I+G G G+ +
Sbjct: 218 IKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GL 276
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVD 347
+F +M+ G P+ +F +IL +CS L VD GK ++ V N + G +VD
Sbjct: 277 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI--VKNSLDGNDFVGTALVD 334
Query: 348 MLGRAGLIEEAYHIIRNM 365
M + +E+A I +
Sbjct: 335 MYAKNRFLEDAETIFNRL 352
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 126 LIFKV---GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+IF+V G+ D ++ ++L+ +Y C+ + A+ V EEMP++DV W+ ++ + +S
Sbjct: 11 IIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLS---SANS 67
Query: 183 P---SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P +A+++F+ M+ N SL+SA SL + GESIH+ G E D+ +
Sbjct: 68 PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
A V MY K VE ++ F M +NL S ++SG D + + +++ G
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+P+ +F +IL C+ G ++EGK ++ + I P + +V++ + G A
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 360 HIIRNMP 366
+ +P
Sbjct: 247 KVFGEIP 253
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 233/397 (58%), Gaps = 3/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ P + A+ LI Y K C E++K F +M D T +++A
Sbjct: 162 RQVFDESPFQDTV-AWTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAAL 220
Query: 114 CLLIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G VH + G + D Y+ + L+ MY C + A VF E+P RDVV W+
Sbjct: 221 VGDADFGRWVHGFYVEAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTV 280
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
++AG+V + DAL+ F M N +PN TL S++SAC + + G +H Y N
Sbjct: 281 LVAGYVQSNKFQDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNK 340
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ ++V LGTALV+MY+KCG +++A +VF M KN+ +WT++I+GLA +G A+++F
Sbjct: 341 INMNVTLGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFC 400
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M+++G++P+ ++F +L+ACSH G V+EGK F+ M Y++KP M+HYGCMVDMLGRA
Sbjct: 401 CMLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRA 460
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G +E+A II NMP +P+ +L + GAC H + + +++G LL+ +P +Y L
Sbjct: 461 GYLEDAKQIIDNMPMKPSPGVLGALFGACLVH-KAFEMGEHIGNLLVNQQPNHSGSYALL 519
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ + NW+ AA++ + + K PG S ++V+
Sbjct: 520 ANLYKMCQNWEAAAQVRKLMKGLRVVKAPGYSRIEVD 556
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 211/386 (54%), Gaps = 34/386 (8%)
Query: 2 ISRHIETLIQLSK---TVHHLHQLHTLFLKTSL----DHNTCIISRFILTSLSISLHFTR 54
+ R TL+ L K T+ Q+ ++ + + L D+NT LT L + F++
Sbjct: 4 LPRWSNTLVSLFKKHQTLEQCKQIQSIIVTSGLYSTQDNNT-----LFLTKLLQCVPFSQ 58
Query: 55 S-------LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKL--FDEMLKTGLRPDNFTYP 105
+ LF+ + TP N +I A CS I L + ++ + G++PD T+P
Sbjct: 59 NQNTCLLLLFDTIN-TPNTRLLNKMIAA-----CSHPHISLLCYAKLRQKGVQPDKHTFP 112
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
++K + + +++ IFK+G D D +IGN L+ +A ++ A+ VF+E P +
Sbjct: 113 LLLKTFSKSIAQN-PFMIYAQIFKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQ 171
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D V+W+++I G+V D P +ALK F +M+L + S ++VT+ S++ A + + G +H
Sbjct: 172 DTVAWTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVH 231
Query: 226 SYAVVNG-LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+ V G ++LD + +AL++MY KCGH E A KVFN + +++ WT++++G + +
Sbjct: 232 GFYVEAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKF 291
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK--NYFDEMARVYNIKPTMEHY 342
A+ F M+ + P+ + S++LSAC+ +G +D+G+ + + E ++ N+ T+
Sbjct: 292 QDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKI-NMNVTLG-- 348
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTE 368
+VDM + G I+EA + NMP +
Sbjct: 349 TALVDMYAKCGSIDEALRVFENMPVK 374
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 229/397 (57%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F +P + ++NT+I A+ +++ + EM LRPD+FT V+
Sbjct: 190 RKVFEMMP-KRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + G D+D +IG++L+ MYA C +D + VF +P D +SW+S+
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG V + LK F +M +A PN V+ S++ AC L + G+ +H Y + +
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V + +ALV+MY+KCG++ A +F+ M ++ SWT MI G A +G AISLF +
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+KP+ ++F A+L+ACSH GLVDE YF+ M + Y I P +EHY + D+LGR G
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 488
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEAY I +M EP + + L ACR H + L + + K L ++P+ YVL +
Sbjct: 489 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNI-ELAEKVSKKLFTVDPQNIGAYVLLS 547
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ S +G W A +L +A+ KG+ K P CSW+++ +
Sbjct: 548 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKN 584
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 196/391 (50%), Gaps = 33/391 (8%)
Query: 7 ETLIQLSKTVH---HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT 63
+TL+Q +V QLH L+TSL + + + + S LH + +FN+LP
Sbjct: 9 KTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P A+ ++IR Y + S+ F +ML +G PD+ +P V+K+C + G SV
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYA---ACKEIDVAKAVFEE------------------- 161
H I ++G+ D Y N L+ MY+ + +E++ K VF+E
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 162 -------MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
MP RD+VSW+++I+G DAL + M A+ P+S TL S++
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+N+ G+ IH YA+ NG + DV +G++L++MY+KC V+ + +VF ++ + + SW +
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I+G NG + + F +M+ +KP+ +SFS+I+ AC+HL + GK + R
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS-R 367
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +VDM + G I A I M
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKM 398
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 260/435 (59%), Gaps = 7/435 (1%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+ ++ L + C+ + + + S+ +R +F +P + ++ +I AY
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAY 328
Query: 77 AKT-SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ C E+I+LF +M+ +RP++F++ V+KACG G V+S K+G+ S
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 388
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN+L+ MYA ++ A+ F+ + +++VS+++++ G+ +A +F+ +
Sbjct: 389 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 448
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
++ T SL+S S+ + GE IH + G + + + AL+ MYS+CG++E
Sbjct: 449 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 508
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF+VFN M ++N+ SWT MI+G A +G A+ +F KM++TG KP+ I++ A+LSACSH
Sbjct: 509 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 568
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+G++ EG+ +F+ M + + I P MEHY CMVD+LGR+GL+ EA I +MP +A++ R
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR HG L + +++L+ EP+ A Y+L +++ + +G W ++ ++ ++
Sbjct: 629 TLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 687
Query: 436 GLNKVPGCSWVKVND 450
L K GCSW++V +
Sbjct: 688 NLIKEAGCSWIEVEN 702
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 22/360 (6%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
QL K VH +++ L+ ++ +++ I L S R +F + L +
Sbjct: 60 FQLGKLVHRK------LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVS 113
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ ++ +A S ++I F +ML+ G P+ + + V++AC +G ++ +
Sbjct: 114 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 173
Query: 129 KVG-LDSDKYIGNTLLRMYA-ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G L++D +G L+ M+ ++ A VF++MP R++V+W+ MI F DA
Sbjct: 174 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 233
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F M+L+ P+ T S++SACT L + G+ +HS + GL LDV +G +LV+M
Sbjct: 234 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293
Query: 247 YSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY-AISLFAKMIQTGLKPD 302
Y+KC G V+ + KVF M E N+ SWT +I+ +G + AI LF KMI ++P+
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 353
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLIEEA 358
SFS++L AC +L Y E Y +K + C ++ M R+G +E+A
Sbjct: 354 HFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 152/286 (53%), Gaps = 11/286 (3%)
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
D M + PD TY ++K+C R +G VH + + GL+ D + NTL+ +Y+
Sbjct: 32 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91
Query: 149 CKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C + + A+ +FE M RD+VSWS+M++ F A+ F M PN +
Sbjct: 92 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151
Query: 208 LVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSK-CGHVEKAFKVFNLMRE 265
++ AC++ GE I+ + V G LE DV +G L++M+ K G + A+KVF+ M E
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+NL +WT+MI+ A G AI LF M +G PD ++S++LSAC+ LGL+ GK
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271
Query: 326 FDEMARVYNIKPTME-HYGC-MVDMLGRA---GLIEEAYHIIRNMP 366
+RV + ++ GC +VDM + G ++++ + MP
Sbjct: 272 H---SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 10/217 (4%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A M N P+ T L+ +C N + G+ +H + +GLELD + L+
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 246 MYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+YSKCG E A +F M +++L SW+ M+S A+N AI F M++ G P+
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGR-AGLIEEAYHII 362
F+A++ ACS+ G+ + + + ++ + GC ++DM + +G + AY +
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYKVF 206
Query: 363 RNMPTEPNAV-----ILRSFLGACRNHGQVLYLDDNL 394
MP E N V I R C L+LD L
Sbjct: 207 DKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 242
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 256/470 (54%), Gaps = 39/470 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIR 74
V +L L KT L+ +T + + I ++L + LF+ +P + ++N +I
Sbjct: 153 VSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMP-DRDVISWNVMIS 211
Query: 75 AYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
Y K ++I +F M + +GL PD T + AC + +G +H + + +
Sbjct: 212 GYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVK 270
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMP------------------------------ 163
IGN LL MY C + +A+AVFEEMP
Sbjct: 271 FTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGS 330
Query: 164 -VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
+RDVV W++MI G+V + +A+ +F M++ P+ +VSL++ C + G+
Sbjct: 331 PIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGK 390
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH + N + +D +GTAL+EMY+KCG +EKA ++F +R K+ SWT +I GLA NG
Sbjct: 391 WIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNG 450
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ + A+ LF+KM Q G++PD I+F +LSACSH GLV+EG+ +F+ M Y IKP +EHY
Sbjct: 451 KTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHY 510
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAV---ILRSFLGACRNHGQVLYLDDNLGKLLL 399
GC+VD+LGRAGL+ EA +I+ +P E A+ + S L ACR +G V + + + K L+
Sbjct: 511 GCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNV-EMGERVAKQLV 569
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
K E + + L A++ + + W+ ++ + G+ K PGCS ++V+
Sbjct: 570 KFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVD 619
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 202/399 (50%), Gaps = 50/399 (12%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K++ HL Q+H + L + +++ F + +L++ +F + P L YN
Sbjct: 48 KSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRY-PCLLIYN 106
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I+A+AK ++ LF ++ + GL PDNFTYPFV KA G + + L+ K
Sbjct: 107 LIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKT 166
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL+ D Y+ N+L+ MYA DV K +F+EMP RDV+SW+ MI+G+V C DA+ VF
Sbjct: 167 GLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVF 226
Query: 191 HRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
RM+ ES P+ T+VS +SACT+L + G+ IH Y V + ++ +G AL++MY
Sbjct: 227 CRMQ--EESGLMPDEATVVSTLSACTALKRLELGKKIHHY-VRDNVKFTPIIGNALLDMY 283
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG------------------------- 282
KCG + A VF M KN+ WT M+SG A+ G
Sbjct: 284 CKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMIN 343
Query: 283 ------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVY 333
R + A++LF +M +KPD ++L+ C+ G +++GK + DE
Sbjct: 344 GYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDE----- 398
Query: 334 NIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
N P G +++M + G IE+A I + + A
Sbjct: 399 NRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTA 437
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 252/430 (58%), Gaps = 20/430 (4%)
Query: 33 HNTCIISR---FILTSLSISLHFTRSLFNNL--PVTPPLFAYNTLIRAYAKTSC--SIES 85
HN I + F S+S SL + + +F+ + P TP A+N++IR ++++ +++
Sbjct: 428 HNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTP---AWNSMIRGFSQSPSPLQLQA 484
Query: 86 IKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
I ++ ML RPD +T+ F++KAC G VH I + G D D + L+R
Sbjct: 485 IVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIR 544
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
YA I+ A VFEEMP RD+VSW+SMI+ + +ALK++ +M+++N + T
Sbjct: 545 SYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFT 604
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVSL+S+C + + G +H +A L ++ +G AL++MY+KCG + A +FN M
Sbjct: 605 LVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMP 664
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
++++ +W MI G +GRG+ AI+ F M+ G++P+SI+F +L CSH GLV EG
Sbjct: 665 KRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQ 724
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
YF M+ +N+KP ++HYGCMVD+ GRAG ++EA +IR+ P++ + V+ R+ LG+C+ H
Sbjct: 725 YFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH 784
Query: 385 GQVLYLDDNLGKLLLKLEPELGA----NYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
V +G++ ++ +LG+ + VL + + + + + A + I +G+
Sbjct: 785 RNV-----EIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTT 839
Query: 441 PGCSWVKVND 450
PG SW++V D
Sbjct: 840 PGWSWIEVGD 849
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 251/447 (56%), Gaps = 10/447 (2%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI---LTSLSISLHFTRSLFNNLPVTPP 65
L+Q K + +H + + N + ++ + ++ R +F+ LP
Sbjct: 13 LLQRCKGTKTIKSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLP-DRD 71
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +NT+I+ YA +E++ +++ M +G+ + +T+PFV+KACG G ++H
Sbjct: 72 VFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGKKGQAIHG 131
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K GLD D ++GN L+ YA C EI ++ VF+ + +D+V+W+SMI+G+ D
Sbjct: 132 HVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAINGCADD 191
Query: 186 ALKVFHRMKLANE----SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
AL +FH M +P+S TLV+++ AC ++ G IHSY + +G+ELD ALG+
Sbjct: 192 ALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGS 251
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
L+ MY+ CG + A VF+ + +KN+ W +I +G + A+ +F+ +I +GL P
Sbjct: 252 GLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHP 311
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D + F +LSA SH G+V EG F++M Y ++ + EHY +VD+LGRAG + EA
Sbjct: 312 DGVIFLCLLSAFSHAGMVAEGMELFEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVEF 370
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
++NMP +P + + LGACR H + L + + + L L+P+ Y++ + +G
Sbjct: 371 VKNMPVQPGKDVYGALLGACRIHNNI-ELAEEIAEKLFVLDPDNAGRYIILVKMYEDAGK 429
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ AA L A+ +K + K GCS +++
Sbjct: 430 WENAARLRKALKEKNIRKPLGCSAIEL 456
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 239/427 (55%), Gaps = 33/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + P L + +IRAY + ++++LF M + GL PD VV ACG
Sbjct: 146 RQVFDEMR-QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGL 204
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA------------------ 155
+G+ ++H I K G++ D ++ +TL+ Y C +D A
Sbjct: 205 LGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTM 264
Query: 156 -------------KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
K +F+ MP RDVVSW+SMI GF +AL FH M+ + SPN+
Sbjct: 265 IHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNA 324
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+TL+S +SAC S + G IH+Y N + D +L ++L++MYSKCG ++KA ++F
Sbjct: 325 LTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
++L +WT ++ GLA +GRG A+ F+KM + ++PD ++ +LSAC+H GL+D+G
Sbjct: 385 STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF M +V+ + P +EHYGCMVD+LGR G ++EAY +I MP E N +I +FL ACR
Sbjct: 445 WWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACR 504
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
H V L + + LL L+P V+ +++ + WD + L I +KGL K PG
Sbjct: 505 VHNNV-ELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPG 563
Query: 443 CSWVKVN 449
CS ++VN
Sbjct: 564 CSSIEVN 570
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 42/336 (12%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEM--LKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+F +NT+IR + L M L+ GLRP+ T+ +++KA + G V
Sbjct: 54 VFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEV 113
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ + + G +++ LL Y AC + + VF+EM +V W+ +I +V P
Sbjct: 114 HASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFP 173
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL++F M+ +P+ V + ++VSAC L ++ +++H + +G+E+D + + L
Sbjct: 174 EKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTL 233
Query: 244 VEMYSKCGHVEKAFK-------------------------------VFNLMREKNLQSWT 272
+ Y +CG ++ A++ +F M ++++ SW
Sbjct: 234 ISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWN 293
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI G A G+ A++ F +M +G+ P++++ + LSAC+ G +D G
Sbjct: 294 SMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGA-----WIHA 348
Query: 333 YNIKPTMEHYG----CMVDMLGRAGLIEEAYHIIRN 364
Y K M G ++DM + G I++A I
Sbjct: 349 YVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 262/512 (51%), Gaps = 69/512 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
H LI S + H L Q+H + ++ ++ ++++FI + S+ S+ + S+F +
Sbjct: 44 HFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELK 103
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+ +N LIR A+ S SI F MLK + PD T+PFV+K+ G+G ++
Sbjct: 104 NS-YLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRAL 162
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE---------------------- 161
H I K GL+ D ++ +L+ MY +E+ A VF+E
Sbjct: 163 HCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCR 222
Query: 162 -------------MPVRDVVSWSSMIAGFVAC---------------------------- 180
MP +D SW+S+I GF+
Sbjct: 223 MGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGF 282
Query: 181 ---DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
P AL+ F M PN T+VS +SAC + + AG IH+Y NG +L++
Sbjct: 283 SQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNL 342
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+GTALV+MY+KCG++E A KVF+ +EK L W++MI G A +G A+ F M T
Sbjct: 343 VIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFT 402
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G KPDS+ F A+L+ACSH G V+EG +FD M R Y I+P+M+HY +VDMLGRAG ++E
Sbjct: 403 GTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDE 462
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
A IR MP P+ V+ + ACR H V + + K LL+LEP+ +YV ++ +
Sbjct: 463 ALKFIRAMPITPDFVVWGALFCACRTHKNV-EMAELASKKLLQLEPKHPGSYVFLSNAYA 521
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G WD A + V++ G +K PG S+++V+
Sbjct: 522 SVGRWDDAERVRVSMRDHGAHKDPGWSFIEVD 553
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 269/485 (55%), Gaps = 52/485 (10%)
Query: 8 TLIQLSKTVHHLHQLHT-LFLKTSL--DHNTCIISRFILTSLSISLHFTRSLFNNL---P 61
+L+ T + Q+H L++ +L DH ++ +F+ ++++S H N +
Sbjct: 19 SLLDSGTTFKEIRQIHAKLYVDGTLKDDH---LVGQFV-KAVALSDHTYLDYANQILDRS 74
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGI 119
P LFA N++IRA+ K+ +S + +L +G L+PDN+T F+V+AC +
Sbjct: 75 DKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRET 134
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAA------------------------------- 148
G VH + + G D+D ++ L+ +YA
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACAR 194
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
C ++ A+ +FE MP +D ++W++MI+G+ +AL +FH M+L N V+++S+
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+SACT L + G HSY N +++ V LGT LV++Y+KCG ++KA +VF M EKN+
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNV 314
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
+W+ ++GLA NG G + LF+ M Q G+ P++++F ++L CS +G VDEG+ +FD
Sbjct: 315 YTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDS 374
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M + I+P ++HYGC+VD+ RAG +E+A II+ MP + +A + S L A R +
Sbjct: 375 MRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASR-----M 429
Query: 389 YLDDNLG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
Y + LG K +L+LE YVL +++ + S +WD + + ++ KG+ K PGCS
Sbjct: 430 YKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCS 489
Query: 445 WVKVN 449
++VN
Sbjct: 490 VMEVN 494
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 206/358 (57%), Gaps = 9/358 (2%)
Query: 94 KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
+ G RP+ T+ ++ AC G +H L+ K G+ + + N L+ +Y ++
Sbjct: 630 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLI 689
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+ +FE++ V+++VSW++MI + + L F+ + P+ T ++++ C
Sbjct: 690 SSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCE 749
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+ VR + IH + G + + TAL+++Y+K G +E + VF + + +WT
Sbjct: 750 DIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTA 809
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
M++ A +G G AI F M+ GL PD ++F+ +L+ACSH GLV+EG+ YF+ M++ Y
Sbjct: 810 MLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRY 869
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
I+P ++HY CMVD++GR+GL+++AY +I+ MP EP++ + + LGACR +Y D
Sbjct: 870 RIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACR-----VYKDTQ 924
Query: 394 LG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
LG K L +LEP G NY++ +++ S SG W A+ + + QKGL + G S+++
Sbjct: 925 LGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIE 982
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF +L V L ++NT+I + + + E + F+ GL+PD T+ V++ C
Sbjct: 694 LFEDLSV-KNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIG 752
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
++ + +H LI G +++ I LL +YA ++ + VF E+ D ++W++M+A
Sbjct: 753 VVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLA 812
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+ DA+K F M SP+ VT L++AC+
Sbjct: 813 AYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACS 850
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 42/251 (16%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L + + NTCI + + L + L + ++F + +P A+ ++ AYA
Sbjct: 760 IHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEI-TSPDSMAWTAMLAAYATHG 818
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++IK F+ M+ GL PD+ T+ ++ AC L+ G +Y
Sbjct: 819 YGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEG---------------RYYFE 863
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
T+ + Y +D + D++ S ++ DA + M + P
Sbjct: 864 TMSKRYRIEPRLDHYSCMV------DLMGRSGLL---------QDAYGLIKEMPM---EP 905
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT---ALVEMYSKCGHVEKAF 257
+S +L+ AC + + G + A EL+ G L +YS G + A
Sbjct: 906 SSGVWGALLGACRVYKDTQLG----TKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDAS 961
Query: 258 KVFNLMREKNL 268
++ NLM++K L
Sbjct: 962 RIRNLMKQKGL 972
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 261/436 (59%), Gaps = 7/436 (1%)
Query: 20 HQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
QLH+ ++ L + C+ I+ + S+ S+ R +F+ + + +F++ +I
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFSWTAMITG 349
Query: 76 YA-KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y K E++ LF M+ T + P++FT+ +KAC + IG V + K+G S
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ N+L+ MYA ID A+ F+ + ++++S++++I + + +AL++F+ ++
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
++ T SL+S S+ + GE IH+ + +GL+L+ ++ AL+ MYS+CG++E
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
AF+VF M ++N+ SWT +I+G A +G A+ LF KM++ G++P+ +++ A+LSACS
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACS 589
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H+GLV+EG +F M + + P MEHY CMVD+LGR+G + EA I +MP + +A++
Sbjct: 590 HVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
R+FLGACR HG L L + K++++ EP A Y+L +++ + + WD + + A+ +
Sbjct: 650 RTFLGACRVHGN-LELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKE 708
Query: 435 KGLNKVPGCSWVKVND 450
K L K GCSWV+V +
Sbjct: 709 KNLIKEAGCSWVEVEN 724
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 15/314 (4%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F + + L +++ ++ +A + ++ F +M++ G P+ + + +AC
Sbjct: 122 SIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTA 181
Query: 115 LLIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSS 172
+ +G S+ + K G L SD +G L+ M+ + ++ A VFE+MP R+ V+W+
Sbjct: 182 EFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTL 241
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI + +A+ +F M L+ P+ TL ++SAC ++ + G+ +HS A+ +G
Sbjct: 242 MITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301
Query: 233 LELDVALGTALVEMYSKC---GHVEKAFKVFNLMREKNLQSWTIMISG-LADNGRGNYAI 288
L LD +G L+ MY+KC G + A K+F+ + + N+ SWT MI+G + G A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC---- 344
LF MI T + P+ +FS+ L AC++L + G+ F + +K C
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANS 416
Query: 345 MVDMLGRAGLIEEA 358
++ M R+G I++A
Sbjct: 417 LISMYARSGRIDDA 430
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++I + M+ G PD TY +K C R IG VH + + L D N+L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 144 RMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
+Y+ C + + A ++F+ M RD++SWS+M++ F + AL F M PN
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSKC-GHVEKAFKVF 260
+ AC++ V G+SI + V G L+ DV +G L++M+ K G + AFKVF
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M E+N +WT+MI+ L G AI LF +MI +G +PD + S ++SAC+++ L+
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288
Query: 321 EGKNYFDEMAR 331
G+ + R
Sbjct: 289 LGQQLHSQAIR 299
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 260/475 (54%), Gaps = 38/475 (8%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPL 66
++++ K + H+ +H ++T D + ++ I ++ S+ + +F+ + P +
Sbjct: 34 SVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS-NPNV 92
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+ Y +I + + S + + L+ M+ + PDN+ V+KAC + + +H+
Sbjct: 93 YLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQ 148
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----------------------- 163
+ K+G S + +G ++ +Y E+ AK +F+EMP
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 164 --------VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
++D V W++MI G V + AL++F M++ N S N T V ++SAC+ L
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ G +HS+ +EL +G AL+ MYS+CG + +A +VF +MR+K++ S+ MI
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
SGLA +G AI+ F M+ G +P+ ++ A+L+ACSH GL+D G F+ M RV+N+
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
+P +EHYGC+VD+LGR G +EEAY I N+P EP+ ++L + L AC+ HG + L + +
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN-MELGEKIA 447
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
K L + E YVL +++ + SG W + E+ ++ G+ K PGCS ++V++
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TL+S++ +C ++ +V SIH+ + + D + L+ + S V+ A+ VF+ +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
N+ +T MI G +GR +SL+ +MI + PD+ +++L AC
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 263/477 (55%), Gaps = 44/477 (9%)
Query: 16 VHHLHQLHTLFLKTSL-DHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLI 73
+H + QLH F+ + L +H++ R + + +++S + + RS+F +P +F YNT+I
Sbjct: 1 MHEVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLD-VFVYNTMI 59
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R +S+ LF+E+L L+PDN+TY FV+KAC + G VH I K G+
Sbjct: 60 RGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS 119
Query: 134 SDKYIGNTLLRMY--------AAC-----------------------KEIDVAKAVFEEM 162
+ +I ++L+ MY A C +D A+A+F++M
Sbjct: 120 PNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQM 179
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
+DV SWS++I G ++AL +F M +++ PN LVSL+SAC L + G
Sbjct: 180 KAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGR 239
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH+Y G ++ + L TAL++MY+KCG ++ +K F M +++ +W +ISG A G
Sbjct: 240 WIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYG 299
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ LF +M+ G+ P+ + F AILSACSH G V+EGK YF++M I+P++EHY
Sbjct: 300 QAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHY 359
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLL 398
GCMVD+LGRAG ++EA I +MP +PN+VI S L ACR H D N G + L
Sbjct: 360 GCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHN-----DLNRGSWAFRHL 414
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
++LEP G Y LA + +G A ++ I +G+ G S+++V DG+ E
Sbjct: 415 IELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEV-DGTIHE 470
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/448 (37%), Positives = 252/448 (56%), Gaps = 21/448 (4%)
Query: 16 VHHLHQLHTLFLKTSLDH--NTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTL 72
+ L QLH ++T+ H NT + IL S+ L + +F+ + P F +N L
Sbjct: 39 ISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIE-NPNSFMWNAL 97
Query: 73 IRAYAK-TSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
IRA A+ T +I L+ ML+ G + D T+PFV+KAC + G +H+ I K+
Sbjct: 98 IRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKL 157
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G DSD YI N+L+ YA C +D AK VF+ M R +VSW+ +I FV AL +F
Sbjct: 158 GFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLF 217
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ E P+ T+ S+ +AC AG S +VN DV L T+LV+MY KC
Sbjct: 218 GEMQKFFE-PDGYTIQSIANAC-------AGMGSLSLGIVN----DVLLNTSLVDMYCKC 265
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAI 309
G +E A ++F+ M ++++ SW MI G + +G A+ F M++T L P++I+F +
Sbjct: 266 GSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGV 325
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
LSAC+H GLV EG+ YFD M Y IKP +EHYGC+VD+L RAGLI+EA ++ NMP P
Sbjct: 326 LSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRP 385
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN-YVLAASVSSLSGNWDTAAEL 428
+ VI RS L AC + L + + + +L+ E + + YVL + V + + W+ +
Sbjct: 386 DLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMV 445
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ KG+ K PGCS +++ DG A E
Sbjct: 446 RKLMTDKGVVKEPGCSSIEI-DGVAHEF 472
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 255/460 (55%), Gaps = 14/460 (3%)
Query: 5 HIET-LIQLSKTVHHLHQLHTLFLKTSLDHN---TCIISRFILTSLSISLHFTRSLFNNL 60
H+ T LI + V L +F K++L T +I+ ++ + R LF+ +
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEG---HVDDARRLFDEI 219
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P + ++N +I Y ++ E++ F M + + P+ T V+ ACG + +G
Sbjct: 220 PAKD-VVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG 278
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+ S + G + + N L+ MY+ C EI A+ +F+ M +DV+ W++MI G+
Sbjct: 279 KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHL 338
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN----GLELD 236
+AL +F M N +PN VT ++++ AC SL + G+ +H+Y N G +
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNN 398
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
V+L T+++ MY+KCG VE A +VF M ++L SW MISGLA NG A+ LF +MI
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMIN 458
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G +PD I+F +LSAC+ G V+ G YF M + Y I P ++HYGCM+D+L R+G +
Sbjct: 459 EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFD 518
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA ++ NM EP+ I S L ACR HGQV + + + + L +LEPE YVL +++
Sbjct: 519 EAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEF-GEYVAERLFELEPENSGAYVLLSNIY 577
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ +G WD A++ +N KG+ KVPGC+ +++ DG E
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEI-DGVVHEF 616
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 199/386 (51%), Gaps = 40/386 (10%)
Query: 19 LHQLHTLFLKTSLDHNTCIIS----RFILTSLSISLHFTRSLFNNLPVTPP-LFAYNTLI 73
L Q+H+L +K+ L HNT F S S L + SLF+++ PP +F +NTLI
Sbjct: 41 LKQIHSLIIKSGL-HNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLI 99
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
RA++ T S+ LF +ML +GL P++ T+P + K+C + +H+ K+ L
Sbjct: 100 RAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALH 159
Query: 134 SDKYIGNTLLRMYAACKE-------------------------------IDVAKAVFEEM 162
++ +L+ MY+ E +D A+ +F+E+
Sbjct: 160 LHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEI 219
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P +DVVSW++MIAG+V +AL F RM+ A+ SPN T+VS++SAC L ++ G+
Sbjct: 220 PAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGK 279
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
I S+ G ++ L ALV+MYSKCG + A K+F+ M +K++ W MI G
Sbjct: 280 WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLS 339
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTM 339
A+ LF M++ + P+ ++F A+L AC+ LG +D GK Y D+ + +
Sbjct: 340 LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV 399
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++ M + G +E A + R+M
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSM 425
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 241/425 (56%), Gaps = 33/425 (7%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LFN + L +++ LI Y + E++ LF EM G+ D V+ AC R L
Sbjct: 245 LFNEMK-QKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLL 303
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE------------------------ 151
++ G VH L+ KVG+++ + N L+ MY++C+E
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363
Query: 152 -------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
I+ A+A+F+ MP +D VSWS+MI+G+ D ++ L +F M++ P+
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVS++SACT L + G+ IH+Y NGL++++ LGT L+ MY K G VE A +VF +
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
EK + +W +I GLA NG + ++ F++M + G+ P+ I+F A+L AC H+GLVDEG
Sbjct: 484 EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR 543
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+F+ M + + I P ++HYGCMVD+LGRAG+++EA +I +MP P+ + LGAC+ +
Sbjct: 544 HFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKY 603
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G + +G+ L++L P+ VL +++ + GNW E+ + Q G+ K PGCS
Sbjct: 604 GDN-ETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCS 662
Query: 445 WVKVN 449
++ +
Sbjct: 663 MIEAH 667
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 213/512 (41%), Gaps = 132/512 (25%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLS---ISLHFTRSLFNNLPV 62
+ET +Q + + +Q+ + + + ++ SR + S I+++ + +F+++
Sbjct: 29 LETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIE- 87
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F NT+++ Y + + ++I ++ ML++ + DN+TYP + ++C L G
Sbjct: 88 NPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKC 147
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+ + KVG DSD YI NTL+ MYA C + A+ VF+ V D+VSW+SM+AG+V +
Sbjct: 148 IQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGN 207
Query: 183 PSDALKVFHRMKLANESPNSVTLV------SLVSAC--------------TSLINVRAGE 222
+A V+ RM N ++ +V ++ AC ++LI+
Sbjct: 208 VEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQN 267
Query: 223 SIHSYAVV-------NGLELD-----------------------------------VALG 240
++ A++ NG+ +D V L
Sbjct: 268 EMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQ 327
Query: 241 TALVEMYSKCGHV-------------------------------EKAFKVFNLMREKNLQ 269
AL+ MYS C V EKA +F+ M +K+
Sbjct: 328 NALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNV 387
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW+ MISG A R + LF +M G KPD +++SAC+HL +D+GK +
Sbjct: 388 SWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGK-WIHAY 446
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE--------------------- 368
R +K + +++M + G +E+A + + + +
Sbjct: 447 IRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKS 506
Query: 369 -------------PNAVILRSFLGACRNHGQV 387
PN + + LGACR+ G V
Sbjct: 507 LKTFSEMKEHGVTPNEITFVAVLGACRHMGLV 538
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 124/260 (47%), Gaps = 5/260 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF+++P + +++ +I YA+ E++ LF EM G +PD V+ AC
Sbjct: 375 RALFDSMPDKDNV-SWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTH 433
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H+ I K GL + +G TL+ MY ++ A VF+ + + V +W+++
Sbjct: 434 LAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNAL 493
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNG 232
I G +LK F MK +PN +T V+++ AC + V G +S +
Sbjct: 494 ILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHK 553
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLF 291
+ ++ +V++ + G +++A ++ M ++ +W ++ G +
Sbjct: 554 IGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIG 613
Query: 292 AKMIQTGLKPDSISFSAILS 311
K+++ L PD F+ +LS
Sbjct: 614 RKLVE--LHPDHDGFNVLLS 631
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 253/433 (58%), Gaps = 9/433 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP--LFAYNTLIRAYAK 78
++H+L +K + + + + L +L F + F P ++ I Y
Sbjct: 129 KMHSLVVKAGCEADAFV--KISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVG 186
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+I +F +L+ GLRPD+F+ V+ AC R + G + I + G+ + ++
Sbjct: 187 VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFV 246
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
L+ Y C ++ A++VF+ M +++VSWSSMI G+ + P +AL +F +M
Sbjct: 247 ATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL--DVALGTALVEMYSKCGHVEKA 256
P+ +V ++ +C L + G+ + ++NG E + LGTAL++MY+KCG +++A
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWASN--LINGNEFLDNSVLGTALIDMYAKCGRMDRA 364
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
++VF MR+K+ W ISGLA +G A+ LF +M ++G+KPD +F +L AC+H
Sbjct: 365 WEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHA 424
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV+EG+ YF+ M V+ + P +EHYGCMVD+LGRAG ++EA+ +I++MP E NA++ +
Sbjct: 425 GLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGA 484
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LG CR H ++ L K L+ LEP NYVL +++ + S W+ AA++ ++++G
Sbjct: 485 LLGGCRLHRDTQLVEVVLKK-LIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERG 543
Query: 437 LNKVPGCSWVKVN 449
+ K+PG SW++V+
Sbjct: 544 VKKIPGYSWIEVD 556
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 208/369 (56%), Gaps = 11/369 (2%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT--PPL 66
LIQ + HL +H L+ LD +T ++++ + S + T F L T P +
Sbjct: 16 LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVL--RFSFNFGNTNYSFRILDQTKEPNI 73
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F +NT+IR C ESI+++ M K GL PD+FT+PFV+KAC R L +G +HSL
Sbjct: 74 FLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSL 133
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K G ++D ++ +L+ +Y C ID A VF+++P ++ SW++ I+G+V +A
Sbjct: 134 VVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREA 193
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F R+ P+S +LV ++SAC ++R+GE I Y NG+ +V + TALV+
Sbjct: 194 IDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDF 253
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG++E+A VF+ M EKN+ SW+ MI G A NG A+ LF KM+ GLKPD +
Sbjct: 254 YGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAM 313
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY---GCMVDMLGRAGLIEEAYHIIR 363
+L +C+ LG ++ G D + + N +++ ++DM + G ++ A+ + R
Sbjct: 314 VGVLCSCARLGALELG----DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369
Query: 364 NMPTEPNAV 372
M + V
Sbjct: 370 GMRKKDRVV 378
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 254/448 (56%), Gaps = 15/448 (3%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTL 72
+++ + Q+H LK +L H + + ++ + S+ T ++ FN + P + YNTL
Sbjct: 29 SLNQVKQIHAQVLKANL-HRESFVGQKLIAAFSLCRQMTLAVNVFNQIQ-DPDVLLYNTL 86
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA+ + S + + +F EM +G+ DNFTYPF++KAC + + + +H+ + K+G
Sbjct: 87 IRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGF 146
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
D ++ N+L+ Y E+ A+ +F+EMP RD VSW++++ G+V + A ++F +
Sbjct: 147 CLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEK 206
Query: 193 MKLANESPNSV----------TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
M N S T++S++SAC + G+ +H+ + + A
Sbjct: 207 MPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNA 266
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY+KCG +E A +F+ M K++ SW +I GLA +G G A+ LF++M G PD
Sbjct: 267 LIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPD 326
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F +L AC+H G VDEG +YF M R Y + P +EHYGCMVD+LGR G ++EA+ ++
Sbjct: 327 KVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLV 386
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+MP EPNA+I + LGACR H ++ + L+K E N + +++ + +G+W
Sbjct: 387 HSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDR-LVKSELSDSGNLSMLSNIYAAAGDW 445
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
D A + + + + K G S ++V+D
Sbjct: 446 DNFANIRLRMKSTSIQKPSGGSSIEVDD 473
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
RC + +H+ + K L + ++G L+ ++ C+++ +A VF ++ DV+ +++
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNT 85
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I V P A VF M+ + ++ T L+ AC+ + VR E IH+ G
Sbjct: 86 LIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMG 145
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
LD+ + +L++ Y K G + +A ++F+ M E++ SW ++ G G N A LF
Sbjct: 146 FCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFE 205
Query: 293 KM----------IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
KM ++ GLK D + +ILSAC+ GL+ GK + R K +
Sbjct: 206 KMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERT-RFKCSTPVS 264
Query: 343 GCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G +E A I M
Sbjct: 265 NALIDMYAKCGSLENALSIFHGM 287
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 264/476 (55%), Gaps = 35/476 (7%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNL 60
I R I L+ K+ HL Q+H FL+ L + I++ FI S + + + LF+
Sbjct: 8 IERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQ- 66
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P +F +N++I+A++ + +S+ LF M + PD +T+ ++K+C +G
Sbjct: 67 SHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLG 126
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF--- 177
V S +F+ G I ++ +Y C++++ A +F+EM RDVV W+ MI GF
Sbjct: 127 QCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKT 186
Query: 178 ------------------------VACDSPS----DALKVFHRMKLANESPNSVTLVSLV 209
++C + + +AL++F +M+ P+ VT+V+++
Sbjct: 187 GNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTML 246
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVA-LGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
C+ L + G+ IHSYA G + + +G +L++ Y KCG++EKA+ +F M K++
Sbjct: 247 PVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSV 306
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
SW +I G A NG+G +AI LF +M + LKP+ +F A+L+AC H GL+++G+ F
Sbjct: 307 VSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSS 366
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
MA Y I+P +EH+GCMVD+LGR G +EEA+ +I++MP +PNA + + LGACR HG L
Sbjct: 367 MAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN-L 425
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
L + K L+ LEP NYVL +++ + G W+ + + +K + K PG S
Sbjct: 426 KLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 259/449 (57%), Gaps = 10/449 (2%)
Query: 9 LIQLSKTVHHL------HQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
++ LS V HL ++H +K LD +T + + + + + ++ +F+ +
Sbjct: 369 IVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMR 428
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ + ++ T+I YA++S IE++++F E K G++ D +++AC I +
Sbjct: 429 IKDHI-SWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAK 487
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H + GL D + N ++ +Y C E+ + +FE + +D+V+W+SMI +
Sbjct: 488 QLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSG 546
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
++AL +F M+ + P+SV LVS++ A L ++ G+ +H + + ++ A+ +
Sbjct: 547 LLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVS 606
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MYS CG + A KVFN ++ K++ WT MI+ +G G AI LF +M+QTG+ P
Sbjct: 607 SLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTP 666
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +SF A+L ACSH LV+EGK Y D M Y ++P EHY C+VD+LGR+G EEAY
Sbjct: 667 DHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEF 726
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I++MP +P +V+ S LGACR H + L LL+LEP+ NYVL ++V + G
Sbjct: 727 IKSMPLKPKSVVWCSLLGACRVH-KNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGK 785
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVND 450
W+ A E+ I+++GL K P CSW+++ +
Sbjct: 786 WNNAKEVRARISERGLRKDPACSWIEIGN 814
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 189/393 (48%), Gaps = 34/393 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L +K LD +T + + I L +F + + ++N++I +
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQN 244
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++++ LF M + L +++T V++ C + +G +H+ + K G + +
Sbjct: 245 GMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC- 303
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N LL MY C +D A VF E+ +D +SW+SM++ +V ++A++ M
Sbjct: 304 NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQ 363
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +VSL SA L + G+ +H+YA+ L+ D +G L++MY KC ++E + V
Sbjct: 364 PDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV 423
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL--- 316
F+ MR K+ SWT +I+ A + R A+ +F + + G+K D + +IL ACS L
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483
Query: 317 -------------GLVD-----EGKNYFDEMARVYN---IKPTMEH-----YGCMVDMLG 350
GL+D + + E VY+ + T+E + M++
Sbjct: 484 LLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYA 543
Query: 351 RAGLIEEAYHIIRNMPT---EPNAVILRSFLGA 380
+GL+ EA + M + +P++V L S LGA
Sbjct: 544 NSGLLNEALVLFAEMQSTDVQPDSVALVSILGA 576
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYN--TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFV 107
L F + + TPP + T ++ K ++++L G P Y +V
Sbjct: 6 LSFPPNPYKKFSTTPPSISPPDPTSLKQLCKEGNLRQALRLLTSQ-TPGRSPPQEHYGWV 64
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGL--DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+ + G VH+ G D ++ LL MY C + A+ +F+ M R
Sbjct: 65 LDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSR 124
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGE 222
V SW+++I +++ S +AL V+ M+L+ S P+ TL S++ A + R G
Sbjct: 125 TVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGC 184
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE-KNLQSWTIMISGLADN 281
+H AV +GL+ + AL+ MY+KCG ++ A +VF LM + +++ SW MISG N
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQN 244
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
G A+ LF M + L +S + +L C+ L ++ G+
Sbjct: 245 GMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGR 286
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 266/512 (51%), Gaps = 70/512 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS-LSISLHFTRSLFNNLPVT 63
H +LI SKT+ LHQ+H + +L ++ I ++ I +S L S++ + ++FN+
Sbjct: 83 HFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHK-P 141
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
LF +N LIR S +I F ML++G++PD TYPFV+K+ +G ++
Sbjct: 142 KNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAI 201
Query: 124 HSLIFKVGLDSDKYIGNTLLRMY----------------------------------AAC 149
H +I + G++ D ++ +L+ MY C
Sbjct: 202 HCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCC 261
Query: 150 KEIDVAKAV--FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-------------- 193
K + KAV F+ MP ++ VSWS++I GF A+++F +M
Sbjct: 262 KAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDG 321
Query: 194 ---------------KLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
K+ E PN+ T+VS +SAC + + AG IH Y NGL L
Sbjct: 322 FSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLT 381
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
ALGTALV+MY+KCG++E A +VF +K++++WT+MI G A +G AI+ F +M+
Sbjct: 382 EALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMF 441
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+KPD + F A+L+AC H G VD G N+FD M Y I+P+M+HY +VDMLGR+G ++
Sbjct: 442 AGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLK 501
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA I MP P+ VI + ACR H + L K LLKLEP NY+ ++
Sbjct: 502 EALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNK-LLKLEPTHTGNYIFLSNAY 560
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ G W+ A + V + +G++K G S ++V
Sbjct: 561 AALGQWEDAERVRVLMQNRGVHKNSGWSCIEV 592
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P +SL+ +++ + IH+ +++ L + T L+ S + +
Sbjct: 78 TPTEAHFISLIHGSKTILQL---HQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLA 134
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
VFN + KNL ++ +I GL N AI F M+++G+KPD +++ +L + + L
Sbjct: 135 VFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGL 192
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 237/399 (59%), Gaps = 10/399 (2%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
++ LF+ + + ++ T+I + E++ LF +M + G+ D +T+ V+ ACG
Sbjct: 223 SKRLFHGMKERDSI-SWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACG 281
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G +H+LI + G + + ++G+ L+ MY C+ + A+AVF+ M ++VVSW++
Sbjct: 282 GLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTA 341
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
M+ G+ +A++VF M+ P+ TL S++S+C +L ++ G H A+V+G
Sbjct: 342 MLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSG 401
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L + + AL+ +Y KCG +E + ++F+ M ++ SWT ++SG A G+ N I LF
Sbjct: 402 LISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFE 461
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M+ GLKPD+++F A+LSACS GLV+ G+ YF+ M + + I P +HY CM+D+ GRA
Sbjct: 462 RMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRA 521
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGAN 408
G +EEA + I MP P+++ + L +CR LY ++ +GK LL+L+P+ A
Sbjct: 522 GRLEEAKNFINKMPFSPDSIGWATLLSSCR-----LYGNEEIGKWAAESLLELDPQNPAG 576
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
Y+L +S+ + G W A+L + +KG K PG SW+K
Sbjct: 577 YILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIK 615
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 189/409 (46%), Gaps = 66/409 (16%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH L +K+ + T + + I + ++ + R +F+ +P P F++NT++ AY+K+
Sbjct: 26 KLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMP-QPNSFSWNTMLSAYSKS 84
Query: 80 S-------------------------------CSIESIKLFDEMLKTG-LRPDNFTYPFV 107
+E++K ++ M+K G L + T+ +
Sbjct: 85 GDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTM 144
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE------ 161
+ + +G +H I K G + ++G++L+ MYA + VA VF+E
Sbjct: 145 LLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNV 204
Query: 162 -------------------------MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
M RD +SW++MI G + ++A+ +F M+
Sbjct: 205 VMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQE 264
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ + T S+++AC L ++ G+ IH+ + +G +V +G+ALV+MY KC V A
Sbjct: 265 GMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYA 324
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
VF M KN+ SWT M+ G NG A+ +F M + G++PD + +++S+C++L
Sbjct: 325 EAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANL 384
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++EG F A V + + ++ + G+ G IE++ + M
Sbjct: 385 ASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 139/309 (44%), Gaps = 45/309 (14%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++HTL +++ +HN + S + + S+ + ++F + + ++ ++ Y +
Sbjct: 291 EIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRM-ANKNVVSWTAMLVGYGQN 349
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S E++++F +M + G+ PD+FT V+ +C + G H GL S +
Sbjct: 350 GFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVS 409
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C I+ + +F+EM RD VSW+++++G+ ++ + +F RM +
Sbjct: 410 NALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLK 469
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++VT ++++SAC S+ G VE+ +
Sbjct: 470 PDAVTFIAVLSAC-----------------------------------SRAGLVERGQQY 494
Query: 260 FNLMREKN-----LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
F M + + +T MI GR A + KM PDSI ++ +LS+C
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM---PFSPDSIGWATLLSSCR 551
Query: 315 HLGLVDEGK 323
G + GK
Sbjct: 552 LYGNEEIGK 560
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 277/504 (54%), Gaps = 52/504 (10%)
Query: 3 SRHIETLIQLS----KTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSL 56
+R +E + S + L ++H ++ SL ++ + ++ + + H TR +
Sbjct: 9 TRQVEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATR-V 67
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-------DNFTYPFVVK 109
F+ + P L +N +I+AYA+ +++I ++ ML+ P D FTYPF++K
Sbjct: 68 FSQVR-EPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLK 126
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------ACKEIDV-- 154
ACG + + +G VH + + G +S+ + N+L+ MY +E DV
Sbjct: 127 ACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVS 186
Query: 155 ----------------AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
A+AVF MP + VVSW+++++G+ A S A++ F M++
Sbjct: 187 WNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGF 246
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ V++V+++ AC L + G I++Y + + + + ALVEMY+KCG +++A +
Sbjct: 247 EPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQ 306
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLG 317
+FN M EK++ SW+ M+ GLA +GR A+ LF +M + G +KP+ I+F +LSACSH G
Sbjct: 307 LFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAG 366
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
L+DEG +YFD M VY I+P +EHYGC+VD+L R+G I+ +I +MP +A I S
Sbjct: 367 LLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSV 426
Query: 378 LGACRNHGQVLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
L ACR+HG V D + + L+ LEPE N V+ A+V + + W A AI +
Sbjct: 427 LNACRSHGDV---DTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSR 483
Query: 436 GLNKVPGCSWVKVNDGSAEEMSKE 459
+ K PGCS ++V++ E ++ E
Sbjct: 484 SMRKTPGCSLIEVDNVVQEFVAGE 507
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 199 SPNSVT------LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
+P+S T +++ + AC S ++ +H++AV L L T +V + + G
Sbjct: 4 APSSATRQVEDAVMASLRACASFRDLL---RVHAHAVRLSLSQSSYLATQIVHLCNAHGR 60
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP-------DSIS 305
V A +VF+ +RE NL MI A N R AI+++ +M++ P D +
Sbjct: 61 VAHATRVFSQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFT 120
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +L AC L +D GK + R + +++M RAG + A + M
Sbjct: 121 YPFLLKACGGLMALDLGKQVHGHVVR-SGCESNAIVQNSLIEMYTRAGDLVLARKVFDGM 179
Query: 366 PTEPNAVILRSFLGACRNHGQV 387
E + V + + A GQ+
Sbjct: 180 -QERDVVSWNTVISAHARLGQM 200
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 263/452 (58%), Gaps = 4/452 (0%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLP 61
S E ++ + L Q H + T + ++++ + L+ + S+ +TR LF ++
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P F +N+LI+A +K S++++ + ML + + P +T+ V+KAC L+ IG
Sbjct: 70 -DPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGT 128
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VHS +F G SD ++ L+ YA VA+ VF+EMP R +V+W+SMI+G+
Sbjct: 129 LVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNG 188
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
++A++VF++M+ + P+S T VS++SAC+ L ++ G +H V +G+ ++V L T
Sbjct: 189 LANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLAT 248
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV M+S+CG V +A VF M E N+ WT MISG +G G A+ +F +M G+ P
Sbjct: 249 SLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVP 308
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+S++F A+LSAC+H GL+DEG++ F M + Y + P +EH+ CMVDM GR GL+ EAY
Sbjct: 309 NSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQF 368
Query: 362 IRNMPT-EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
++ + + E + + LGAC+ H L + + L+ EPE +YVL +++ +L+G
Sbjct: 369 VKGLNSDELVPAVWTAMLGACKMHKN-FDLGVEVAENLINAEPENPGHYVLLSNMYALAG 427
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
D + + Q+GL K G S + V++ S
Sbjct: 428 RMDRVESVRNVMIQRGLKKQVGYSTIDVDNRS 459
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 251/432 (58%), Gaps = 9/432 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K+ N + S + + + L +++ + + ++N+L+ + +
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 344
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI--GGSVHSLIFKVGLDSDKY 137
E+++LF M ++ D++T+P V+ C ++G SVH LI K G ++ K
Sbjct: 345 GLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC----VVGSINPKSVHGLIIKTGFENYKL 400
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N L+ MYA ++D A VFE+M +DV+SW+S++ G+ +S ++LK+F M++
Sbjct: 401 VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 460
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+P+ + S++SAC L + G+ +H + +GL ++ +LV MY+KCG ++ A
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F M+ K++ +WT +I G A NG+G ++ + M+ +G +PD I+F +L ACSH G
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAG 580
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVDEG+ YF +M +VY IKP EHY CM+D+ GR+G ++EA ++ M +P+A + +S
Sbjct: 581 LVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR H + L L + L +LEP YV+ +++ S S W+ A++ + KG+
Sbjct: 641 LSACRVH-ENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699
Query: 438 NKVPGCSWVKVN 449
K PGCSW+++N
Sbjct: 700 VKEPGCSWLEIN 711
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 157/300 (52%), Gaps = 3/300 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++ YA+ ++++ F M G+ + +T+P ++ AC L G VH I
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G S+ Y+ + L+ MYA C ++ AK + E M DVVSW+S++ GFV +AL+
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M N + T S+++ C ++ +S+H + G E + ALV+MY+
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G ++ A+ VF M EK++ SWT +++G A N ++ +F M TG+ PD ++
Sbjct: 411 KTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVAS 470
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
ILSAC+ L L++ GK + + ++ + Y +V M + G +++A I +M +
Sbjct: 471 ILSACAELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK 529
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 13/297 (4%)
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y K C +E+ LF M G + FT V++ C LI G +H + K G +
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEG 195
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFE--EMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ ++ L+ MYA CK + A+ +F+ E ++ V W++M+ G+ A++ F
Sbjct: 196 NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 255
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M N T ++++AC+S++ GE +H + V +G +V + +ALV+MY+KCG
Sbjct: 256 MHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD 315
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++ A + M + ++ SW ++ G +G A+ LF M +K D +F ++L+
Sbjct: 316 LKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNM 365
C +G ++ + IK E+Y +VDM + G ++ AY + M
Sbjct: 376 CV-VGSINP------KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM 425
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 45/287 (15%)
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV-------------ACDSP 183
Y N LL + +++ A+ +F++MP +D SW++MI+ +V C
Sbjct: 66 YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125
Query: 184 S------------------DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
S +A +F M+L + TL S++ C+SL ++ GE IH
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIH 185
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKA---FKVFNLMREKNLQSWTIMISGLADNG 282
+ V NG E +V + T LV+MY+KC V +A FK R KN WT M++G A NG
Sbjct: 186 GFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR-KNHVLWTAMVTGYAQNG 244
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH- 341
G A+ F M G++ + +F IL+ACS + F E + +K
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSV-----LARCFGEQVHGFIVKSGFGSN 299
Query: 342 ---YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+VDM + G ++ A +++ M + + V S + HG
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDD-DVVSWNSLMVGFVRHG 345
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 261/481 (54%), Gaps = 40/481 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLS-ISLH-FTRSLFNNLPVTP 64
+++ +++ ++H +L ++ ++++ + +T+L + LH + R LF+ L TP
Sbjct: 14 ILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLH-TP 72
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
FA+ LIRAYA +++ + M K + P +FT+ + AC +G +H
Sbjct: 73 NPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLH 132
Query: 125 SLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS------------ 171
+ +G SD Y+ N ++ MY C + A+ VF+EMP RDV+SW+
Sbjct: 133 AQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDM 192
Query: 172 -------------------SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+M+ G+ P DAL+VF R++ + VTLV ++SAC
Sbjct: 193 RAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISAC 252
Query: 213 TSLINVRAGESIHSYAVVNGLEL--DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
L + I A +G + +V +G+AL++MYSKCG+VE+A+ VF MRE+N+ S
Sbjct: 253 AQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFS 312
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
++ MI G A +GR AI LF M++TG+KP+ ++F +L+ACSH GLVD+G+ F M
Sbjct: 313 YSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASME 372
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
+ Y + PT E Y CM D+L RAG +E+A ++ MP E + + + LGA HG +
Sbjct: 373 KCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNP-DV 431
Query: 391 DDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ K L +LEP+ NY+L ++ + +G WD +++ + +K L K PG SWV+ +
Sbjct: 432 AEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKN 491
Query: 451 G 451
G
Sbjct: 492 G 492
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 39/317 (12%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV---AKAVFEEMP 163
VV+ RC + VH+ I+ L Y+ LLR+ A + + + +F ++
Sbjct: 11 VVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLH 70
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ +W+++I + S AL + M+ SP S T +L SAC ++ + G
Sbjct: 71 TPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQ 130
Query: 224 IHSYA-VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE----------------- 265
+H+ ++ G D+ + A+++MY KCG + A VF+ M E
Sbjct: 131 LHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIG 190
Query: 266 --------------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
K++ +WT M++G A N A+ +F ++ G++ D ++ ++S
Sbjct: 191 DMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVIS 250
Query: 312 ACSHLGLVDEGKNYFDEMARV--YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
AC+ LG + N+ ++A + + + ++DM + G +EEAY + + M E
Sbjct: 251 ACAQLG-ASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGM-RER 308
Query: 370 NAVILRSFLGACRNHGQ 386
N S + HG+
Sbjct: 309 NVFSYSSMIVGFAIHGR 325
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 226/383 (59%), Gaps = 2/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ LI + ++E+++ F EM +G+ D T V+ A + G VH
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 128 FKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ G + D Y+G+ L+ MY+ C D A VF EMP R++VSW ++IAG+V C+ +A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LKVF M + PN T+ S ++AC L ++ G +H Y + L L+ LGTALV+M
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDM 350
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG V++A VF + K++ WT MI+GLA G +++LF++MI++ ++P+ ++F
Sbjct: 351 YSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTF 410
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSAC+H GLVDEG F M Y ++P ++HYGCMVD+LGRAG +EEA I +MP
Sbjct: 411 LGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMP 470
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EP + + C H + L +++G L+KL+P Y+L A++ S W+ AA
Sbjct: 471 MEPTPGVWGALFSGCMIH-KAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 427 ELMVAINQKGLNKVPGCSWVKVN 449
+ + KG++K P CSW++VN
Sbjct: 530 NVRRLMKGKGVDKSPACSWIEVN 552
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 199/358 (55%), Gaps = 11/358 (3%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
T HL+Q ++ + + L H+T +S +L S + L +T LF+ L TP +F +NT++R
Sbjct: 20 TFDHLNQTTSILITSGLAHHTFFLSD-LLRSATKDLGYTLLLFDRL-ATPYIFLWNTIVR 77
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+++ +S + + + G+ PD T+P ++KA + L ++ I K GLD
Sbjct: 78 SFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSK-LRNENPFQFYAHIVKFGLDF 136
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D ++ N+L+ +A C +D ++ +F E +DVVSW+++I G + +AL+ F M+
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-DVALGTALVEMYSKCGHV 253
+ + VT+VS++ A L +V G +H + V +G + DV +G+ALV+MYSKCG+
Sbjct: 197 SSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYC 256
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A KVFN M +NL SW +I+G R A+ +F +MI G++P+ + ++ L+AC
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTAC 316
Query: 314 SHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ LG +D+G+ Y D N K +VDM + G ++EA + +P +
Sbjct: 317 AQLGSLDQGRWLHEYVDRSKLGLNSKLGTA----LVDMYSKCGCVDEALLVFEKLPAK 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FN +P T L ++ LI Y + + E++K+F EM+ G+ P+ T + AC +
Sbjct: 262 VFNEMP-TRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + + L + +G L+ MY+ C +D A VFE++P +DV W++MI
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLE 234
G +L +F +M + PN VT + ++SAC V G + + + LE
Sbjct: 381 GLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLE 440
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISG 277
+V +V++ + G +E+A K M E W + SG
Sbjct: 441 PNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 230/422 (54%), Gaps = 41/422 (9%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T+I YA CS E++++F+ ML + + P+ T VV AC + +G VH +
Sbjct: 326 WTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE 385
Query: 129 KVGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKA 157
+ + + N LL MY A C +++ A+
Sbjct: 386 EKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARR 445
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
F++ P ++ V WS+MIAG+ + P ++LK+FH M P TLVS++SAC L
Sbjct: 446 FFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTC 505
Query: 218 VRAGESIHSYAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G+ IH Y VV + L V L A+V+MY+KCG ++ A +VF+ M E+NL SW MI+
Sbjct: 506 LNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIA 565
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G A NGR AI++F +M G +P++I+F ++L+ACSH GL+ EG+ YFD M R Y IK
Sbjct: 566 GYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIK 625
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P HY CMVD+LGR GL+EEAY +I NMP +P + L ACR HG V L +
Sbjct: 626 PERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNV-----ELAR 680
Query: 397 L----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
L LL+L+PE YVL A+ + W + + KG+ K+PG S ++++ G
Sbjct: 681 LSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGF 740
Query: 453 AE 454
E
Sbjct: 741 VE 742
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 221/474 (46%), Gaps = 83/474 (17%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPP 65
+++ T+ L Q+ T + + +SR F + S LH+ ++FN + P
Sbjct: 163 IMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVE-QPN 221
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +NT+IR Y I + F M + + D+ ++ F +KAC + + G SV+
Sbjct: 222 TFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYC 281
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+++K+G D + + N L+ YA + A+ VF+E +DVV+W++MI G+ A D +
Sbjct: 282 VVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEE 341
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY------------------ 227
A++VF M L++ PN VTL+++VSAC+ + N+ G+ +H
Sbjct: 342 AMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLD 401
Query: 228 ------AVVNGLEL-------DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+V+ EL DV T++V Y+KCG +E A + F+ KN W+ M
Sbjct: 402 MYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAM 461
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMAR 331
I+G + N + ++ LF +M++ G+ P + ++LSAC L ++ G YF + +
Sbjct: 462 IAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF-VVGK 520
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHI------------------------------ 361
+ + T+E+ +VDM + G I+ A +
Sbjct: 521 IIPLSVTLEN--AIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAIN 578
Query: 362 ----IRNMPTEPNAVILRSFLGACRNHGQVL-----YLDDNLGKLLLKLEPELG 406
+RNM EPN + S L AC +HG ++ Y D+ K +K PE G
Sbjct: 579 VFDQMRNMGFEPNNITFVSLLTAC-SHGGLISEGREYFDNMERKYGIK--PERG 629
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 123/237 (51%), Gaps = 6/237 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R F+ P + ++ +I Y++ + ES+KLF EM++ G+ P T V+
Sbjct: 440 LESARRFFDQTPRKNAV-CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLS 498
Query: 110 ACGRCLLIGIGGSVHSLIFKVG--LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
ACG+ + +G +H F VG + + N ++ MYA C ID A VF MP R++
Sbjct: 499 ACGQLTCLNLGDWIHQY-FVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 557
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG-ESIHS 226
+SW++MIAG+ A A+ VF +M+ PN++T VSL++AC+ + G E +
Sbjct: 558 ISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDN 617
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNG 282
G++ + +V++ + G +E+A+K+ N+ + +W +++ +G
Sbjct: 618 MERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHG 674
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 232/368 (63%), Gaps = 21/368 (5%)
Query: 85 SIKLFDEMLKTG-----LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
SI L +M++ G LRP+ F P ++KACG G ++H++I K +SD YI
Sbjct: 349 SIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 408
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ MY+ C ++ A VF+ +P +VVSW+++IAGF +M
Sbjct: 409 SALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAGF-------------SQMLDQGFC 453
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+SVT+ SL+ ACT++ N+R G+ IH YA+V G+E DV + +ALV+MY+KCG++ +A +
Sbjct: 454 PSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKIL 513
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +M E+N +W +I G A++G N AI LF +M ++ K D ++F+A+L+ACSH G+V
Sbjct: 514 FYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMV 573
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+ G++ F +M Y I+P +EHY CMVD+LGRAG + EAY +I+ MP EP+ + + LG
Sbjct: 574 ELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 633
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACRNHG + L + + L +LEPE + +L +++ + +G W AA++ + Q+ K
Sbjct: 634 ACRNHGNI-ELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGK 692
Query: 440 VPGCSWVK 447
PGCSW++
Sbjct: 693 FPGCSWIE 700
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 158/305 (51%), Gaps = 19/305 (6%)
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
CGR + +G H + K+GL SD+++ +L+ MYA C E+D A V+++M D +
Sbjct: 123 CGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATC 182
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+ +I+ + A +VF ++ PN T ++++ C ++ ++ G+ +H++ V
Sbjct: 183 NCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVK 242
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
+ A+G AL+ +YSKCG +E+A VF + ++N+ SWT I+G +G A+
Sbjct: 243 MQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQ 302
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F+ M ++G++P+ +FS +L++C D GK R + + +H ++ +
Sbjct: 303 FSMMRESGIEPNEFTFSIVLASCG----CDLGKWM---KQRTSSNRWGGQH---LMSIFL 352
Query: 351 RAGLIEEAYHIIRNMPT--EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
+IEE N PT PN +L S L AC H +N+ ++LK E A
Sbjct: 353 LRKMIEEG-----NKPTSLRPNQFVLPSILKAC-GHLSDRRTGENMHTVILKNSFESDA- 405
Query: 409 YVLAA 413
Y+++A
Sbjct: 406 YIISA 410
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 160/356 (44%), Gaps = 42/356 (11%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N LI AYA+ +++ ++F ++ G RP+++TY ++ CG I G +H+ + K
Sbjct: 183 NCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVK 242
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+ S+ +GN LL +Y+ C ++ A+ VFE + R+++SW++ I GF ALK
Sbjct: 243 MQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQ 302
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLI----------NVRAGESIHSYAVVNGLELDVAL 239
F M+ + PN T ++++C + N G+ + S ++ + +
Sbjct: 303 FSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNK 362
Query: 240 GTA-------LVEMYSKCGHV---EKAFKVFNLMREKNLQSWTIMISGL----------- 278
T+ L + CGH+ + ++ + + +S +IS L
Sbjct: 363 PTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVE 422
Query: 279 ---------ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
+ N I+ F++M+ G P S++ S++L AC+++ + GK
Sbjct: 423 KACRVFDWIPNVVSWNTLIAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKE-IHGY 481
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
A V ++ + +VDM + G I EA + MP E N V S + NHG
Sbjct: 482 AMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHG 536
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 151 EIDVAKAVFEEMPVRDVVSWS-SMIAGFVACDSPSDALK---VFHR-----MKLANESPN 201
+++ A +FE+ P R VS + S +G D P + +K F R ++ P+
Sbjct: 55 DLNNACILFEKTPKRIGVSITESHRSG--CTDDPEEGVKEAGFFTRNETPHVEFGGGFPH 112
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+ S +S C V G H + V GL D + T+L++MY+KCG V+ A +V++
Sbjct: 113 RQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M + + +IS A NG A +F ++ G +P+ ++S +L+ C + + E
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
GK + ++ + T ++ + + G++EEA + N+
Sbjct: 233 GKQLHAHVVKMQYLSETAVG-NALLTLYSKCGMMEEAEIVFENL 275
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N+LI YA E+I+LF++M ++ + D+ T+ V+ AC ++ +G SL
Sbjct: 525 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG---ESLFR 581
Query: 129 KVGLDSDKYIGNTLLRMYAA-------CKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVAC 180
K+ +KY L YA ++ A + + MPV D W +++ AC
Sbjct: 582 KM---QEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG---AC 635
Query: 181 DSPSD----ALKVFHRMKLANESPNSVTLVS 207
+ + + H +L ESP S L+S
Sbjct: 636 RNHGNIELAEVAAEHLFELEPESPGSSLLLS 666
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 252/449 (56%), Gaps = 2/449 (0%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
S I T+ S + H+ Q+ + +L + I FI T + L + LF
Sbjct: 12 STRILTIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTCHHLHLLGSAFLFFTHIP 71
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P +F N+LIRA++ + + L+ M + + P+N+T+PFV+K+ + G S
Sbjct: 72 KPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQS 131
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH+ + K G SD Y+ NTL+ +YA+C ++ + K VF+EM DVVSW+ +I G+
Sbjct: 132 VHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFM 191
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
DAL VF +M+ A PN VT+V+ ++AC S + G IH + E+DV LGTA
Sbjct: 192 LDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTA 251
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY KCG +++A VF M+EKN+ +W + I+GLA G AI+ F +M + G++ D
Sbjct: 252 LIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEAD 311
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
++ A+LSACSH GLV+ G+ F + + P ++HY CMVD+L R G IEEA +
Sbjct: 312 DVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVM 371
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I++MP E + S L R HG L + + + L+++EPE G YV+ +++ + G
Sbjct: 372 IKDMPFEATRSMWGSLLTGSRAHGS-LEVSEIAARRLVEMEPENGGYYVVLSNIYAEMGK 430
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVND 450
W ++ + ++GL K G S V++ +
Sbjct: 431 WSEVEKVREIMKERGLKKDLGSSSVELQE 459
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 238/388 (61%), Gaps = 1/388 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
V + ++ +I Y + E + +F EM+ +G +P+ T V+ AC + +G
Sbjct: 190 VVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGK 249
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H K+G+D D + N L+ +Y C ++ A+++F+ M V+++VSW++MIA + +
Sbjct: 250 LIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNN 309
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ ++A+K+F RM+ + +T+VS++SAC SL + G +H GLE++V++
Sbjct: 310 AGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITN 369
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++MY+KCG+++ A +VF + +++ SWT MI A +G G A+ LF++M G+KP
Sbjct: 370 ALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKP 429
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+S +F+A+ +AC H GLV+EG+ +F+ M R Y+I P +EH CMVD+LGRAG + EAY
Sbjct: 430 NSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEF 489
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP EP+ + + LG+CR H L L + + + L L+P+ YVL +++ + +G
Sbjct: 490 IDKMPVEPDVSVWGALLGSCRIHSN-LELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGR 548
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W+ AA L + ++ L K+PG S V+VN
Sbjct: 549 WEDAARLRKLMEERELKKIPGHSLVEVN 576
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 213/386 (55%), Gaps = 5/386 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS--LSISLHFTRSLFNNL 60
SR L+ ++ L ++H L + N + ++ I+T+ L+ ++ + R +F+ +
Sbjct: 29 SRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQM 88
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P +F +NTLIR YA E++ L+ M GL PDN+T+PFVV++C + G
Sbjct: 89 P-KRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH I K G DSD ++ ++L+ MY+ E + VF EM VR++VSW+++IAG+V
Sbjct: 148 KEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQN 207
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ L VF M + PN+VTLVS++ AC L + G+ IH Y + G++ DV+L
Sbjct: 208 RYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLT 267
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL+ +Y KCG+VE A +F+ M +NL SW MI+ N G A+ LF +M +
Sbjct: 268 NALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVD 327
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
D I+ +++SAC+ LG ++ G+ + E+ + ++ + ++DM + G I+ A
Sbjct: 328 FDYITMVSVISACASLGALNTGR-WMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQ 386
+ +P + V S +GAC +HG
Sbjct: 387 VFERLPCR-SVVSWTSMIGACASHGH 411
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 254/444 (57%), Gaps = 5/444 (1%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E L S L ++H + L+T ++++ + + I + + R +F+ + P
Sbjct: 15 ELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH-KPR 73
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +NTL + Y + ES+ L+ +M G+RPD FTYPFVVKA + G ++H+
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G + L+ MY E+ A+ +FE M V+D+V+W++ +A V + +
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+ F++M +S T+VS++SAC L ++ GE I+ A ++ ++ + A ++
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+ KCG+ E A +F M+++N+ SW+ MI G A NG A++LF M GL+P+ ++
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARV--YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
F +LSACSH GLV+EGK YF M + N++P EHY CMVD+LGR+GL+EEAY I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP EP+ I + LGAC H ++ L + +L++ P++G+ +VL +++ + +G WD
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMI-LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 424 TAAELMVAINQKGLNKVPGCSWVK 447
++ + + G KV S V+
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVE 456
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 271/504 (53%), Gaps = 47/504 (9%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHT-LFLKTSLDHNTC----IISRFILTSLSIS------- 49
+S I TLI+ KT++ L+Q+H F K L C I+++ + +I
Sbjct: 26 LSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFS 85
Query: 50 -LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
LH+ S F+N+ P F YN +IR + S ++ ++ F +M + + PD +YPF +
Sbjct: 86 LLHYAVSTFDNIQ-NPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFAL 144
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------ACKEID-------- 153
KAC ++ + +HS +FK G SD Y+ N+L+ +Y+ AC+ D
Sbjct: 145 KACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVV 204
Query: 154 ----------------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
A+ +F+ MP+RD VSW S+IAG+ ++A+ +F M
Sbjct: 205 SYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLK 264
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+++ LVS +SAC L + G+ IH Y N ++ D L T LV+ Y+K G ++ A
Sbjct: 265 LEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAI 324
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
KVF L +K+L +W M+ G+A +G + ++ F++M++ G+KPD ISF +L CSH G
Sbjct: 325 KVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGG 384
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVDE K FDEM +Y ++ ++HYGCM D+L RAGLI+EA + + +P + +
Sbjct: 385 LVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGL 444
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI-NQKG 436
LG CR HG + + + K +++L+PE G Y + A+V + + W+ ++ ++ + +
Sbjct: 445 LGGCRIHGNI-EIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRA 503
Query: 437 LNKVPGCSWVKVNDGSAEEMSKET 460
+ K G S +++ + E ++ E+
Sbjct: 504 VKKNAGRSSIQLGGLTHEFLAGES 527
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 229/397 (57%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F +P + ++NT+I A+ +++ + EM LRPD+FT V+
Sbjct: 150 RKVFEMMP-KRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 208
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + G D+D +IG++L+ MYA C +D + VF +P D +SW+S+
Sbjct: 209 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 268
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG V + LK F +M +A PN V+ S++ AC L + G+ +H Y + +
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V + +ALV+MY+KCG++ A +F+ M ++ SWT MI G A +G AISLF +
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+KP+ ++F A+L+ACSH GLVDE YF+ M + Y I P +EHY + D+LGR G
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 448
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEAY I +M EP + + L ACR H + L + + K L ++P+ YVL +
Sbjct: 449 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNI-ELAEKVSKKLFTVDPQNIGAYVLLS 507
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ S +G W A +L +A+ KG+ K P CSW+++ +
Sbjct: 508 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKN 544
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 31/329 (9%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML +G PD+ +P V+K+C + G SVH I ++G+ D Y N L+ MY+
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+ EE V+ S M+ G P + K + L E V +
Sbjct: 61 L-------EEGGVQRFCD-SKMLGGI---PEPREIGKCSNSHDLPCELDERVAGIDQNGD 109
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK----CGHVEKAFKVFNLMREKN 267
+ N+ + + G DV YSK ++ KVF +M +++
Sbjct: 110 LNQMSNILYQVNTYKKVFDEGKTSDV---------YSKKEKESYYLGSLRKVFEMMPKRD 160
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ SW +ISG A NG A+ + +M L+PDS + S++L + + +GK
Sbjct: 161 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 220
Query: 328 EMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
R Y+ + ++DM + ++++ + +P + + + S + C +G
Sbjct: 221 YAIRNGYDADVFIG--SSLIDMYAKCTRVDDSCRVFYMLP-QHDGISWNSIIAGCVQNGM 277
Query: 387 VLYLDDNLGKLLLKLEPELGANYVLAASV 415
D+ L L ++ N+V +S+
Sbjct: 278 ---FDEGLKFFQQMLIAKIKPNHVSFSSI 303
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 252/469 (53%), Gaps = 48/469 (10%)
Query: 20 HQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
QLH LK L +N T ++ ++L L R +F+ P + +N +I A
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCG---QLDTARGVFDVCP-KADVITWNMIISA 193
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
Y K ES +LF M + P T V+ AC + + G VHS + ++S+
Sbjct: 194 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 253
Query: 136 KYIGNTLLRMYAACKE-------------------------------IDVAKAVFEEMPV 164
+ N ++ MYA C E IDVA+ F++MP
Sbjct: 254 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 313
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+D VSW++MI G++ + +AL++F M+ N P+ T+VS+++AC L + GE I
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 373
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+Y N ++ D+ + AL++MY KCG V+KA +F M +++ +WT MI GLA NG G
Sbjct: 374 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ +F+ M++ + PD I++ +LSAC+H GLVD+G+ YF M + I+P + HYGC
Sbjct: 434 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 493
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLK 400
+VD+L RAG ++EAY +I NMP + N+++ + L CR +Y + ++ K +L+
Sbjct: 494 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCR-----VYRESDMAEMVVKQILE 548
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LEP+ GA YVL ++ + W+ EL + KG+ K PGCS +++N
Sbjct: 549 LEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMN 597
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 207/418 (49%), Gaps = 45/418 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ +++ L Q+H +K L+ N + +R F T + R LF+ +P P
Sbjct: 23 SLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP-EP 81
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF +NT+IR Y++ + L+ EML+ G++PD +T+PF+ K R + + G +H
Sbjct: 82 NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLH 141
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K GL + ++ L++MY C ++D A+ VF+ P DV++W+ +I+ +
Sbjct: 142 GHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFE 201
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
++ ++F M+ P +VTLV ++SAC+ L ++R G+ +HSY +E ++ L A++
Sbjct: 202 ESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMI 261
Query: 245 EMYSKCGHVEKAFKV-------------------------------FNLMREKNLQSWTI 273
+MY+ CG ++ A + F+ M EK+ SWT
Sbjct: 262 DMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTA 321
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
MI G + R A+ LF M T +KPD + ++L+AC+HLG ++ G E R Y
Sbjct: 322 MIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-----EWIRTY 376
Query: 334 ----NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG-ACRNHGQ 386
IK + ++DM + G +++A I R M +G A HG+
Sbjct: 377 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 42/375 (11%)
Query: 35 TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
T I+S F T+L + R+ F+ +P ++ +I Y +++ E+++LF M
Sbjct: 289 TTIVSGF--TNLG-EIDVARNYFDKMP-EKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
T ++PD FT V+ AC + +G + + I + + +D ++ N L+ MY C ++D
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 404
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+++F EM RD +W++MI G AL +F M A+ P+ +T + ++SACT
Sbjct: 405 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 464
Query: 215 LINVRAGESIH-SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWT 272
V G +G+E ++A LV++ ++ G +++A++V N+ + N W
Sbjct: 465 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWG 524
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDS----ISFSAILSACSHLGLVDEGKNYFDE 328
+++G + A + ++++ L+PD+ + I +AC N E
Sbjct: 525 ALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKRW-------NDLRE 575
Query: 329 MARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ ++ K + GC +++M GR + F+ R+H Q
Sbjct: 576 LRQMMMDKGIKKTPGCSLIEMNGR----------------------VHEFVAGDRSHPQT 613
Query: 388 LYLDDNLGKLLLKLE 402
+D L K+ L+
Sbjct: 614 KNIDAKLDKMTQDLK 628
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 255/455 (56%), Gaps = 21/455 (4%)
Query: 16 VHHLHQLHTLFLKTSLDH--NTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTL 72
+ L QLH ++T+ H NT + IL S+ L + +F+ + P F +N L
Sbjct: 39 ISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIE-NPNSFMWNAL 97
Query: 73 IRAYAK-TSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
IRA A+ T +I L+ ML+ G + D T+PFV+KAC + G +H+ I K+
Sbjct: 98 IRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKL 157
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G DSD YI N+L+ YA C +D AK VF+ M R +VSW+ +I FV AL +F
Sbjct: 158 GFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLF 217
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-------VNGLELDVALGTAL 243
M+ E P+ T+ S+ +AC + ++ G H + + VN DV L T+L
Sbjct: 218 GEMQKFFE-PDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVN----DVLLNTSL 272
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPD 302
V+MY KCG +E A ++F+ M ++++ SW MI G + +G A+ F M++T L P+
Sbjct: 273 VDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPN 332
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+I+F +LSAC+H GLV EG+ YFD M Y IKP +EHYGC+VD+L RAGLI+EA ++
Sbjct: 333 AITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVV 392
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN-YVLAASVSSLSGN 421
NMP P+ VI RS L AC + L + + + +L+ E + + YVL + V + +
Sbjct: 393 SNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASR 452
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
W+ + + KG+ K PGCS +++ DG A E
Sbjct: 453 WNDVGMVRKLMTDKGVVKEPGCSSIEI-DGVAHEF 486
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 250/445 (56%), Gaps = 11/445 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTLIR 74
V + ++H LK L+ + + S + T L + S+ + +F L + + +N +I
Sbjct: 126 VMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVL-WNAMIN 184
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
YAK C E++++F M G+ P FT ++ + G +VH ++ K+G DS
Sbjct: 185 GYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDS 244
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ N L+ MY CK I A +FE + +D+ SW+S+I+ C L++F +M
Sbjct: 245 GVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKML 304
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--------VALGTALVEM 246
+ P+ VT+ +++ AC+ L + G IH Y ++NGL D + + A+++M
Sbjct: 305 GSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDM 364
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A K+F+ M +K++ SW IMI G +G A+ +F++M + KP+ ++
Sbjct: 365 YAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTL 424
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSAC+H G V G+ + +M + + PT+EHY C++DMLGRAG +E+AY I++ MP
Sbjct: 425 VGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMP 484
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ N V+ R+ LGACR HG L + + +L+LEPE +YVL ++V + G ++
Sbjct: 485 IQANPVVWRALLGACRLHGNA-ELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVL 543
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDG 451
E+ + ++ + K PGCSW+++ DG
Sbjct: 544 EVRKTMKEQNVKKTPGCSWIELKDG 568
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 145/258 (56%), Gaps = 3/258 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+FAYN +I + + + + + +M G+ PD +T+P VV+ C + + +H
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHG 134
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K+GL+ D ++G+ L+ Y ++ A+ VF E+ +RDVV W++MI G+ +
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+VF RM + +P+ T+ ++S S ++ G+++H + G + V++ AL++
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KC H+ A +F ++ EK++ SW +IS G + + LF KM+ +G+ PD ++
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 306 FSAILSACSHLGLVDEGK 323
+ +L ACSHL + G+
Sbjct: 315 ITTVLPACSHLAALMHGR 332
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF-EEMPVRDVVSWSSMIAGFV 178
G +HSL+ G +L+ MY+ C ++ A VF + R+V +++++I+GFV
Sbjct: 30 GKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFV 89
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ S + + +M+L P+ T +V C ++ V+ IH + GLELDV
Sbjct: 90 SNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVF 146
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G+ALV Y K G +E A KVF + +++ W MI+G A G + A+ +F +M G
Sbjct: 147 VGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKG 206
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEE 357
+ P + + ILS + G +D GK + ++ Y+ ++ + ++DM G+ I +
Sbjct: 207 VAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSN--ALIDMYGKCKHIGD 264
Query: 358 AYHIIRNMPTEPNAVILRSFLGA---CRNHGQVLYLDDNL 394
A II M E + S + C +H L L D +
Sbjct: 265 AL-IIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKM 303
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N V+ + +C N+ G+ +HS + G T+L+ MYSKCG + +A VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 261 -NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ E+N+ ++ +ISG NG + + KM G+ PD +F ++ C
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC 123
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 240/415 (57%), Gaps = 7/415 (1%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT 95
C+I+ + S S + R LF+++P ++N++I YA E++ LFD+ML+
Sbjct: 149 CLITGY---SRSGDVEEARRLFDSMPRKTSA-SWNSMIACYAHGGEFQEALTLFDQMLRE 204
Query: 96 GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
G P+ T V C + + G + + + L + + L+ MY C+ ID A
Sbjct: 205 GASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEA 263
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
+ F+ MP RDVV+WS+MIAG+ P ++L++F RMK N PN VTLV ++SAC L
Sbjct: 264 RREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 323
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ GE I SY L L LG+AL++MY+KCGHV +A VF+ M +K + +W MI
Sbjct: 324 GSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMI 383
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYN 334
GLA NG AI+L+ +M+ G++P+ I+F A+L+AC+H GLVD+G +F EM + +
Sbjct: 384 RGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQH 443
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
P +EH C+VD+L ++G + EAY I +M EPNAVI + L ACR H V
Sbjct: 444 ASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAA 503
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
GKL++ LEP + YVL +++ + +G W E+ + K L K+ SW++++
Sbjct: 504 GKLVV-LEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 168/398 (42%), Gaps = 66/398 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +P P + +K S E I+ + + G + P V+K+C
Sbjct: 32 RHLFDAVP-RPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----- 168
G H G+ D ++ L+ YA +D A FEEMP++D +
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 169 --------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
SW+SMIA + +AL +F +M SPN+
Sbjct: 151 ITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T+ ++ S C ++ G ++ L+ +V + TAL+EMY KC +++A + F+
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAIDEARREFDR 269
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +++ +W+ MI+G + NGR + ++ LF +M T KP+ ++ +LSAC+ LG + G
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 329
Query: 323 KN---YFD----------------------EMARVYNIKPTMEH-----YGCMVDMLGRA 352
+ Y + +AR ++ ME + M+ L
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389
Query: 353 GLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHGQV 387
G E+A + M +PN + + L AC + G V
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLV 427
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 231/383 (60%), Gaps = 2/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I Y + E++KLF +M+KT ++PD+ TY ++ + + +G +H +
Sbjct: 443 SWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDL 501
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+G +S+ + NTL+ MYA C E+ + VFE M RD+++W+++IA V + + L
Sbjct: 502 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 561
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++ RM+ +P+ T++S++ C+ L R G+ IH GLE DV +G L+EMY
Sbjct: 562 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 621
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG + +F+VF LM+ K++ +WT +IS G G A+ F +M G+ PD ++F
Sbjct: 622 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 681
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
AI+ ACSH GLV+EG NYF M + Y I+P +EHY C+VD+L R+ L+++A I +MP
Sbjct: 682 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 741
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P++ I + L ACR G + + + +++L P+ YVL ++V + G WD
Sbjct: 742 KPDSSIWGALLSACRMSGDT-EIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRS 800
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ +I +GL K PGCSW+++ +
Sbjct: 801 IRKSIKARGLKKDPGCSWMEIQN 823
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 219/433 (50%), Gaps = 21/433 (4%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT--RSLFNNLPVTPP---LFAY 69
T LH+LH+L + L H+ ++ I + HF S F+ + P ++ +
Sbjct: 87 TTTQLHKLHSLIITLGLHHSVIFSAKLI----AKYAHFRDPTSSFSVFRLASPSNNVYXW 142
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IRA E++ L+ E + L+PD +T+P V+ AC L + S+H +
Sbjct: 143 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLX 202
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G SD YIGN L+ MY ++D A+ VFEEMP+RDVVSW+S+I+G+ A ++AL++
Sbjct: 203 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 262
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
++R + P+S T+ S++ AC L +V G+ IH G++ DV + L+ MY K
Sbjct: 263 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 322
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
+ ++F+ M ++ SW MI G + G +I LF +M+ KPD ++ ++I
Sbjct: 323 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 381
Query: 310 LSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
L AC HLG ++ GK D M Y T + +++M + G + + + M +
Sbjct: 382 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNI--LINMYAKCGNLLASQEVFSGMKCK 439
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN---YVLAASVSSLSGNWDTA 425
++V S + +G D KL ++ ++ + YV+ S+S+ G+
Sbjct: 440 -DSVSWNSMINVYIQNGSF----DEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLG 494
Query: 426 AELMVAINQKGLN 438
EL + + G N
Sbjct: 495 KELHCDLAKMGFN 507
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F N+ + +NT+I + + +++ M G+ PD T ++ C
Sbjct: 532 VFENMKARD-IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 590
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
G +H IFK+GL+SD +GN L+ MY+ C + + VF+ M +DVV+W+++I+
Sbjct: 591 AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALIS 650
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLE 234
A++ F M+ A P+ V V+++ AC+ V G H +E
Sbjct: 651 ACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 710
Query: 235 LDVALGTALVEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V++ S+ ++KA + ++ + + W ++S +G A + +
Sbjct: 711 PRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSER 770
Query: 294 MIQTGLKPDSISFSAILS 311
+I+ L PD + ++S
Sbjct: 771 IIE--LNPDDTGYYVLVS 786
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 232/383 (60%), Gaps = 2/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I Y + E++KLF +M+KT ++PD+ TY ++ + + +G +H +
Sbjct: 384 SWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDL 442
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+G +S+ + NTL+ MYA C E+ + VFE M RD+++W+++IA V + + L
Sbjct: 443 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 502
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++ RM+ +P+ T++S++ C+ L R G+ IH GLE DV +G L+EMY
Sbjct: 503 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 562
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG + +F+VF LM+ K++ +WT +IS G G A+ F +M G+ PD ++F
Sbjct: 563 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 622
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
AI+ ACSH GLV+EG NYF M + Y I+P +EHY C+VD+L R+ L+++A I +MP
Sbjct: 623 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 682
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P++ I + L ACR G + + + + +++L P+ YVL +++ + G WD
Sbjct: 683 KPDSSIWGALLSACRMSGDT-EIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRS 741
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ +I +GL K PGCSW+++ +
Sbjct: 742 IRKSIKARGLKKDPGCSWMEIQN 764
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 219/433 (50%), Gaps = 21/433 (4%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT--RSLFNNLPVTPP---LFAY 69
T LH+LH+L + L H+ ++ I + HF S F+ + P ++ +
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLI----AKYAHFRDPTSSFSVFRLASPSNNVYLW 83
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IRA E++ L+ E + L+PD +T+P V+ AC L + S+H +
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G SD YIGN L+ MY ++D A+ VFEEMP+RDVVSW+S+I+G+ A ++AL++
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
++R + P+S T+ S++ AC L +V G+ IH G++ DV + L+ MY K
Sbjct: 204 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 263
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
+ ++F+ M ++ SW MI G + G +I LF +M+ KPD ++ ++I
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 322
Query: 310 LSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
L AC HLG ++ GK D M Y T + +++M + G + + + M +
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEVFSGMKCK 380
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN---YVLAASVSSLSGNWDTA 425
++V S + +G D KL ++ ++ + YV+ S+S+ G+
Sbjct: 381 -DSVSWNSMINVYIQNGSF----DEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLG 435
Query: 426 AELMVAINQKGLN 438
EL + + G N
Sbjct: 436 KELHCDLAKMGFN 448
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 139/309 (44%), Gaps = 9/309 (2%)
Query: 9 LIQLSKTVHHLH---QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
L+ +S + LH +LH K + N + + + + + + + +F N+
Sbjct: 422 LLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARD 481
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ +NT+I + + +++ M G+ PD T ++ C G +H
Sbjct: 482 -IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 540
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
IFK+GL+SD +GN L+ MY+ C + + VF+ M +DVV+W+++I+
Sbjct: 541 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 600
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTAL 243
A++ F M+ A P+ V V+++ AC+ V G H +E + +
Sbjct: 601 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 660
Query: 244 VEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
V++ S+ ++KA + ++ + + W ++S +G A + ++I+ L PD
Sbjct: 661 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPD 718
Query: 303 SISFSAILS 311
+ ++S
Sbjct: 719 DTGYYVLVS 727
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 238/418 (56%), Gaps = 41/418 (9%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A+A+ +C ++++LF +M + + P++ T V+ AC + L + G V S I
Sbjct: 194 SWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYI 253
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS----- 182
+ G+ D + N +L MY C +D A+ +F+EMP RDV SW+ M+ G+
Sbjct: 254 ERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAAR 313
Query: 183 --------------------------PSDALKVFHRMKLAN-ESPNSVTLVSLVSACTSL 215
P +AL +F+ ++L+ P+ VTLVS +SAC L
Sbjct: 314 LVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQL 373
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ G IH Y G+ L+ L ++LV+MY+KCG +EKA +VF + E+++ W+ MI
Sbjct: 374 GAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMI 433
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
+GL +GRG AI LF +M + +KP+S++F+ +L ACSH GLVDEG+ +F EM VY +
Sbjct: 434 AGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGV 493
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
P M+HY CMVD+LGRAG +EEA +I M T P+A + + LGAC H V LG
Sbjct: 494 VPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNV-----ELG 548
Query: 396 KL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+L LLKLEP VL +++ + +G W+ +EL + L K PGCS ++ N
Sbjct: 549 ELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEAN 606
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 222/419 (52%), Gaps = 41/419 (9%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNL 60
I + I + L ++H L+T L + S+ L+S S +L + R+LF+ +
Sbjct: 27 QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFS-TLDYARNLFDQI 85
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGI 119
P P L+ +NTLIRAYA +S +S +F ++L K P+ FT+PFV+KA +
Sbjct: 86 P-QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +VH + K+ D YI N+L+R Y AC ++ +A+ +F+ + +DVVSW+SMI+ F
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+ P DAL++F +M+ N PNSVT+V ++SAC +++ G + SY G+++D+ L
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTL 264
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA-------------------- 279
A+++MY+KCG V+ A K+F+ M E+++ SWTIM+ G A
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 280 -----------DNGRGNYAISLFAKMIQTGL-KPDSISFSAILSACSHLGLVDEGKNYFD 327
NG+ A+++F ++ + + KPD ++ + LSAC+ LG +D G +
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIH 383
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ I +VDM + G +E+A + ++ E + + + + HG+
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSV-EERDVYVWSAMIAGLGMHGR 441
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 3/213 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKAC 111
R +FN +PV + A+N LI AY + E++ +F+E+ L +PD T + AC
Sbjct: 312 ARLVFNAMPVKE-IAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ I +GG +H I + G+ + ++ ++L+ MYA C ++ A VF + RDV WS
Sbjct: 371 AQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWS 430
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVV 230
+MIAG A+ +F M+ A PNSVT +++ AC+ V G H V
Sbjct: 431 AMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV 490
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
G+ ++ +V++ + G +E+A ++ N M
Sbjct: 491 YGVVPEMKHYACMVDILGRAGFLEEAMELINEM 523
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 40/325 (12%)
Query: 43 LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNF 102
L+ SISL +L NNL LF + ++ K S S + ++ ML+TGL D F
Sbjct: 4 LSVPSISLQNFSTLNNNL-----LFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPF 58
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
+ + K + L ++ +D A+ +F+++
Sbjct: 59 S------------------------------ASKLFTASALSSFST---LDYARNLFDQI 85
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVF-HRMKLANESPNSVTLVSLVSACTSLINVRAG 221
P ++ +W+++I + + P + +F + + PN T ++ A + L R G
Sbjct: 86 PQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVG 145
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
++H A+ +D+ + +LV Y CG + A ++F + K++ SW MIS A
Sbjct: 146 TAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQG 205
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
A+ LF KM + + P+S++ +LSAC+ ++ G+ + R IK +
Sbjct: 206 NCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIER-KGIKVDLTL 264
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP 366
M+DM + G +++A + MP
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMP 289
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 227/387 (58%), Gaps = 3/387 (0%)
Query: 68 AYNTLIRAYAKTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++NT+I A A + S+ E+I++F EM++ G P+ T+ ++ + +H+L
Sbjct: 272 SWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHAL 331
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSD 185
I K + D I N LL Y E++ + +F M RD VSW+SMI+G++ +
Sbjct: 332 ILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCK 391
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ + M + + T +++SAC ++ + G +H+ A+ LE DV +G+ALV+
Sbjct: 392 AMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVD 451
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKCG ++ A + FNLM +NL SW MISG A +G G+ A+ LF +M +G PD I+
Sbjct: 452 MYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHIT 511
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSACSH+GLVDEG YF M VY + P +EHY CMVD+LGRAG +++ + I M
Sbjct: 512 FVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKM 571
Query: 366 PTEPNAVILRSFLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
P +PN +I R+ LGA CR +G+ L ++L ++P+ NYVL +++ + G W+
Sbjct: 572 PIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWED 631
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDG 451
A A+ + + K GCSWV + DG
Sbjct: 632 MARTRRAMREAAVKKEAGCSWVTMKDG 658
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ +P + + LI Y + ++ + EM+ G P+ F + ++AC
Sbjct: 54 ARKLFDEMPDRNGV-TWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQ 112
Query: 113 RCLLIGIGG-SVHSLIFKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
+L G VH + GL+ K +GN L+ MYA C +ID A++VF M +D VSW
Sbjct: 113 ESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSW 172
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+SMI G DA+K ++ M+ P++ L+S +S+C SL + G+ H +
Sbjct: 173 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIK 232
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG-NYAIS 289
GL++DV++ L+ +Y++ + + KVF+ M E++ SW +I LAD+G + AI
Sbjct: 233 LGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIE 292
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
+F +M++ G P+ ++F +L+ S L + + + YN+K ++
Sbjct: 293 VFLEMMRAGWSPNRVTFINLLATVSSLS-TSKLSHQIHALILKYNVKDDNAIENALLACY 351
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
G++G +E I M + V S +
Sbjct: 352 GKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H ++ L+ + I S + + S + + FN +PV L+++N++I YA+
Sbjct: 429 EVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRN-LYSWNSMISGYARH 487
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV-GLDSDKYI 138
+++LF M +G PD+ T+ V+ AC L+ G + +V GL
Sbjct: 488 GHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEH 547
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIA 175
+ ++ + E+D + +MP++ +++ W +++
Sbjct: 548 YSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLG 585
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 252/468 (53%), Gaps = 48/468 (10%)
Query: 21 QLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH LK L +N T ++ ++L L R +F+ P + +N +I AY
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCG---QLDTARGVFDVCP-KADVITWNMIISAY 215
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
K ES +LF M + P T V+ AC + + G VHS + ++S+
Sbjct: 216 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275
Query: 137 YIGNTLLRMYAACKE-------------------------------IDVAKAVFEEMPVR 165
+ N ++ MYA C E IDVA+ F++MP +
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSW++MI G++ + +AL++F M+ N P+ T+VS+++AC L + GE I
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+Y N ++ D+ + AL++MY KCG V+KA +F M +++ +WT MI GLA NG G
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
A+ +F+ M++ + PD I++ +LSAC+H GLVD+G+ YF M + I+P + HYGC+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKL 401
VD+L RAG ++EAY +I NMP + N+++ + L CR +Y + ++ K +L+L
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCR-----VYRESDMAEMVVKQILEL 570
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
EP+ GA YVL ++ + W+ EL + KG+ K PGCS +++N
Sbjct: 571 EPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMN 618
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 207/418 (49%), Gaps = 45/418 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ +++ L Q+H +K L+ N + +R F T + R LF+ +P P
Sbjct: 44 SLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP-EP 102
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF +NT+IR Y++ + L+ EML+ G++PD +T+PF+ K R + + G +H
Sbjct: 103 NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLH 162
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K GL + ++ L++MY C ++D A+ VF+ P DV++W+ +I+ +
Sbjct: 163 GHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFE 222
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
++ ++F M+ P +VTLV ++SAC+ L ++R G+ +HSY +E ++ L A++
Sbjct: 223 ESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMI 282
Query: 245 EMYSKCGHVEKAFKV-------------------------------FNLMREKNLQSWTI 273
+MY+ CG ++ A + F+ M EK+ SWT
Sbjct: 283 DMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTA 342
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
MI G + R A+ LF M T +KPD + ++L+AC+HLG ++ G E R Y
Sbjct: 343 MIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-----EWIRTY 397
Query: 334 ----NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG-ACRNHGQ 386
IK + ++DM + G +++A I R M +G A HG+
Sbjct: 398 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 42/375 (11%)
Query: 35 TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
T I+S F T+L + R+ F+ +P ++ +I Y +++ E+++LF M
Sbjct: 310 TTIVSGF--TNLG-EIDVARNYFDKMP-EKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
T ++PD FT V+ AC + +G + + I + + +D ++ N L+ MY C ++D
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 425
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+++F EM RD +W++MI G AL +F M A+ P+ +T + ++SACT
Sbjct: 426 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 485
Query: 215 LINVRAGESIH-SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWT 272
V G +G+E ++A LV++ ++ G +++A++V N+ + N W
Sbjct: 486 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWG 545
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDS----ISFSAILSACSHLGLVDEGKNYFDE 328
+++G + A + ++++ L+PD+ + I +AC N E
Sbjct: 546 ALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKRW-------NDLRE 596
Query: 329 MARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ ++ K + GC +++M GR + F+ R+H Q
Sbjct: 597 LRQMMMDKGIKKXPGCSLIEMNGR----------------------VHEFVAGDRSHPQT 634
Query: 388 LYLDDNLGKLLLKLE 402
+D L K+ L+
Sbjct: 635 KNIDAKLDKMTQDLK 649
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 233/383 (60%), Gaps = 1/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NT+I YA+ S E+ F +ML G+ P N + + AC + G VH L+
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ + D + N+L+ MY+ CK +D+A +VF + + VV+W++MI G+ ++AL
Sbjct: 371 DEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEAL 430
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ + P+S TLVS+++A L R + IH A+ ++ +V + TAL++ +
Sbjct: 431 NLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTH 490
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG ++ A K+F+LM+E+++ +W MI G NG G A+ LF +M +KP+ I+F
Sbjct: 491 AKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFL 550
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++++ACSH GLV+EG YF+ M Y ++PTM+HYG MVD+LGRAG +++A+ I++MP
Sbjct: 551 SVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPV 610
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P +L + LGACR H V L + L L+P+ G +VL A++ + + WD A
Sbjct: 611 KPGITVLGAMLGACRIHKNV-ELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVAR 669
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ A+ +KG+ K PGCS V++ +
Sbjct: 670 VRTAMEKKGIQKTPGCSLVELRN 692
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 176/320 (55%), Gaps = 10/320 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSL--DH--NTCIISRFI-LTSLSISLHFTRSLFNNLPVT 63
L++L ++ LHQ+ L +K +H T +IS F S++ + + + L V
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
Y+T+++ YAK S ++++ ++ M + P + + ++++ G L + G +
Sbjct: 110 -----YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H ++ G S+ + ++ +YA C++I+ A +FE MP RD+VSW++++AG+
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFA 224
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
A++V +M+ A + P+S+TLVS++ A L +R G SIH YA G E V + TA+
Sbjct: 225 RRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAM 284
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++ Y KCG V A VF M +N+ SW MI G A NG A + F KM+ G++P +
Sbjct: 285 LDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTN 344
Query: 304 ISFSAILSACSHLGLVDEGK 323
+S L AC++LG ++ G+
Sbjct: 345 VSMMGALHACANLGDLERGR 364
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 199/443 (44%), Gaps = 41/443 (9%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +P L ++NT++ YA+ + ++++ +M + G +PD+ T V+ A
Sbjct: 199 MFERMP-QRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLK 257
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ IG S+H F+ G + + +L Y C + A+ VF+ M R+VVSW++MI
Sbjct: 258 ALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMID 317
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ +A F +M P +V+++ + AC +L ++ G +H +
Sbjct: 318 GYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF 377
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV++ +L+ MYSKC V+ A VF ++ K + +W MI G A NG N A++LF +M
Sbjct: 378 DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ 437
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEG-------------KNYF------DEMARVYNIK 336
+KPDS + ++++A + L + + KN F D A+ I+
Sbjct: 438 SHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQ 497
Query: 337 PTME-----------HYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACR 382
+ + M+D G G EA ++ ++N +PN + S + AC
Sbjct: 498 TARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS 557
Query: 383 NHGQV---LYLDDNLGKLLLKLEPEL---GANYVLAASVSSLSGNWDTAAELMVAINQKG 436
+ G V +Y +++ K LEP + GA L L W ++ V
Sbjct: 558 HSGLVEEGMYYFESM-KENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITV 616
Query: 437 LNKVPGCSWVKVNDGSAEEMSKE 459
L + G + N E+ + E
Sbjct: 617 LGAMLGACRIHKNVELGEKTADE 639
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L ++T +D N + + I T ++ R LF+ L + +N +I Y
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFD-LMQERHVITWNAMIDGYGTNG 525
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG-GSVHSLIFKVGLDSDKYIG 139
E++ LF+EM ++P+ T+ V+ AC L+ G S+ GL+
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHY 585
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVR 165
++ + +D A ++MPV+
Sbjct: 586 GAMVDLLGRAGRLDDAWKFIQDMPVK 611
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 258/463 (55%), Gaps = 36/463 (7%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH + + L + + I TS S SLH R LF+ + P + YNT+ R YA
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAV-YHPSTYLYNTMFRVYAA 64
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG-------------RCLLIGIGGSV-- 123
+ + ++ L M + G PD +T+PF++KAC + L G+GG V
Sbjct: 65 SPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGHVFV 124
Query: 124 -HSLIFKVG----LDSDKYIGN-----------TLLRMYAACKEIDVAKAVFEEMPVRDV 167
+SLI G +DS + + + TLL YA ++ A+ VF+EMP R V
Sbjct: 125 ENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPERSV 184
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VS+S+M+A +V + +AL++F + P+ ++S++ AC +L + G ++S+
Sbjct: 185 VSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYSF 244
Query: 228 AV-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
G +D + TAL++M+ KCG +E A VF +EK++ WT M+SGLA +G G
Sbjct: 245 VCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQ 304
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
I F KM+ +G+KPD ++F A+LS CSH GLV+EG YFD M + ++PT+EH+GC+V
Sbjct: 305 LIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCVV 364
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+LGRAGLI++A +I MP EPNA I + L ACR + V + + + L+K EP G
Sbjct: 365 DLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNV-EVGELAAQWLIKDEPWNG 423
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A Y+ S+ +G WD ++ + + + G K PGCS ++V
Sbjct: 424 ALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVG 466
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 255/430 (59%), Gaps = 5/430 (1%)
Query: 23 HTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K L+ H+ + S + S R +F+ +P T + ++N +++AY +
Sbjct: 175 HALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIP-TRDVVSWNAMMKAYGRVGM 233
Query: 82 SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E ++F +M+K G + P+ T V+ AC + +G V + ++ D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
LL MY C EI A+ VF+ + +D+V+W++MI G+ ++A+ +FH M++A P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TL ++SAC+++ + G + YA GL +V +GTALV+MY+KCG ++KA +VF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLV 319
M KN+ SW +I GLA NGRG+ AI F M + GLKPD I+F +LSAC H GLV
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+GK +F+ + + I P +EHY CMVD+L R+G +EEA+ I +P + +AV+L + L
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR V + + + +++LEP NYV+++ + + S D +A++ + ++G+NK
Sbjct: 534 ACRKCKNV-EIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 440 VPGCSWVKVN 449
PGCSWV+V+
Sbjct: 593 TPGCSWVEVS 602
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 176/307 (57%), Gaps = 3/307 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F+YN IR +A +S S++LF ML++ +RPD++T PF++ A R + +
Sbjct: 115 APTAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARA 173
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+L+ K+GL+ + ++L+ MY+ + A+ VF+ +P RDVVSW++M+ +
Sbjct: 174 AHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 183 PSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ ++F M K +PN+VT+ +++AC ++ G + ++ +E+D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL+ MY KCG + +A +VF+ + +K++ +W MI+G A NG N AISLF M G++P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+ + +LSACS +G ++ G D A + + +VDM + G +++A +
Sbjct: 354 DKITLAGVLSACSAVGALELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 362 IRNMPTE 368
R MP +
Sbjct: 413 FRKMPCK 419
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 252/403 (62%), Gaps = 8/403 (1%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSI---ESIKLFDEMLKTGLR-PDNFTYPFV 107
+ R+LF+ +P P F YN+LIRA + + + +++ ++ ML+ G P++FT F
Sbjct: 79 YARNLFDQIP-EPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFA 137
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRD 166
+KAC +G G +HS F+ GL+ Y+ LL +YA C+E+ +A+ VF+ M ++
Sbjct: 138 LKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 197
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+ +WS+MI G+ ++AL +F M+ A+ +P+ VT+VS++SAC + G +H+
Sbjct: 198 LAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHA 257
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+ G+ +D+ L TAL++MY+KCG +E+A VF+ M E++ ++W+ MI GLA +G
Sbjct: 258 FIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEV 317
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF++M++ ++P++++F +LSAC+H GLV+EG+ Y+ M + IKP+ME+YGCMV
Sbjct: 318 ALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMV 376
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D+ R+ L++EAY + M PN+VI R+ L A +N + + + K LL+LEP
Sbjct: 377 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNR-FDIVQSASKKLLELEPCNP 435
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
NYVL +++ + + WD + + + + +N V GCS +++N
Sbjct: 436 ENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEIN 478
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 249/458 (54%), Gaps = 19/458 (4%)
Query: 3 SRHIETLIQLSKTVHHLH-----QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSL 56
SRH T L K V L Q H +K LD + + + I S L F L
Sbjct: 103 SRH--TFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + + +I + + + E++ F EM KTG+ + T V+KA G+
Sbjct: 161 FDGAE-DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 117 IGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G SVH L + G + D +IG++L+ MY C D A+ VF+EMP R+VV+W+++IA
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V + VF M ++ +PN TL S++SAC + + G +H Y + N +E+
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ GT L+++Y KCG +E+A VF + EKN+ +WT MI+G A +G A LF M+
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + P+ ++F A+LSAC+H GLV+EG+ F M +N++ +HY CMVD+ GR GL+
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLL 459
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
EEA +I MP EP V+ + G+C +L+ D LGK ++KL+P Y L
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSC-----LLHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ S S NWD A + + + + K PG SW++V
Sbjct: 515 LANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 199/391 (50%), Gaps = 19/391 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSL--DHNTCIISRFILTSLSISLHF--TRSLFNNLP 61
++TL+ L HL Q+H L L + + +SR + + + F R L L
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQ 63
Query: 62 VTPPLFAYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
T + +++LI ++ T S + M + G+ P T+P ++KA + L
Sbjct: 64 -TLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK-LRDSN 121
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
H+ I K GLDSD ++ N+L+ Y++ D A +F+ +DVV+W++MI GFV
Sbjct: 122 PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVA 238
S S+A+ F MK + N +T+VS++ A + +VR G S+H + G ++ DV
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G++LV+MY KC + A KVF+ M +N+ +WT +I+G + + + +F +M+++
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDMLGRAGL 354
+ P+ + S++LSAC+H+G + G+ Y IK ++E ++D+ + G
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRR-----VHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+EEA + + E N + + HG
Sbjct: 357 LEEAILVFERL-HEKNVYTWTAMINGFAAHG 386
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 248/443 (55%), Gaps = 12/443 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNT 71
S+++ QLH L + L +T + ++ + + L R LF+ +P +F +N
Sbjct: 75 SRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP-KRNVFLWNV 133
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIRAYA+ +I+L+ M+ G+ PDNFTYP +KAC L + G VH +
Sbjct: 134 LIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTH 193
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
D ++ L+ MYA C +D A+AVF+ + VRD V W+SMIA + P +AL +
Sbjct: 194 WGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCR 253
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M P TLVS +SA + G +H + G + L T+LV+MY+K G
Sbjct: 254 DMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSG 313
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAIL 310
V+ A +F + ++ L SW MI G +G + A+ LF KM ++ + PD+I+F +L
Sbjct: 314 WVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVL 373
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
SAC+H G+V E K +F M VY+IKPT++H+ C+VD+LG AG EEAY +I+ MP +P+
Sbjct: 374 SACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPD 433
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAA 426
+ I + L C+ H V LG+L L++LEPE NYVL +++ + SG W+ AA
Sbjct: 434 SGIWGALLNGCKIHKNV-----ELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAA 488
Query: 427 ELMVAINQKGLNKVPGCSWVKVN 449
+ + +GL K+ GCSW+++
Sbjct: 489 RVRKLMTNRGLKKIIGCSWIELK 511
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 37/317 (11%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y V+++C +G G +H + GL D + L+ +YAAC + A+ +F+ MP
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 164 VRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
R+V W+ +I + A D P + A++++ M P++ T + AC +L+++ G
Sbjct: 125 KRNVFLWNVLIRAY-ARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H + D+ + LV+MY+KCG V+ A VF+ +R ++ W MI+ NG
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY--------FD------- 327
R A+SL M G+ P + + +SA + + G+ FD
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303
Query: 328 ------------EMARVYN---IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---- 368
++ARV +K + + M+ G G +EA + M E
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363
Query: 369 PNAVILRSFLGACRNHG 385
P+ + L AC NHG
Sbjct: 364 PDNITFVGVLSAC-NHG 379
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 199 SPNSVT-LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
SPNS S++ +C + ++ G +H +V+GL D L T LV++Y+ CG V A
Sbjct: 58 SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
++F+ M ++N+ W ++I A +G AI L+ M+ G++PD+ ++ L AC+ L
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
++ G+ + RV + + C +VDM + G +++A + + ++V+
Sbjct: 178 DLETGREVHE---RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWN 233
Query: 376 SFLGACRNHGQ 386
S + A +G+
Sbjct: 234 SMIAAYGQNGR 244
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 255/430 (59%), Gaps = 5/430 (1%)
Query: 23 HTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K L+ H+ + S + S R +F+ +P T + ++N +++AY +
Sbjct: 175 HALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIP-TRDVVSWNAMMKAYGRVGM 233
Query: 82 SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E ++F +M+K G + P+ T V+ AC + +G V + ++ D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
LL MY C EI A+ VF+ + +D+V+W++MI G+ ++A+ +FH M++A P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TL ++SAC+++ + G + YA GL +V +GTALV+MY+KCG ++KA +VF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLV 319
M KN+ SW +I GLA NGRG+ AI F M + GLKPD I+F +LSAC H GLV
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+GK +F+ + + I P +EHY CMVD+L R+G +EEA+ I +P + +AV+L + L
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR V + + + +++LEP NYV+++ + + S D +A++ + ++G+NK
Sbjct: 534 ACRKCKNV-EIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 440 VPGCSWVKVN 449
PGCSWV+V+
Sbjct: 593 TPGCSWVEVS 602
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 175/307 (57%), Gaps = 3/307 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F+YN IR +A +S S++LF ML++ +RPD++T PF++ A R + +
Sbjct: 115 APTAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARA 173
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+L+ K+GL+ + ++L+ MY+ + A+ VF+ +P RDVVSW++M+ +
Sbjct: 174 AHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 183 PSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ ++F M K +PN VT+ +++AC ++ G + ++ +E+D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL+ MY KCG + +A +VF+ + +K++ +W MI+G A NG N AISLF M G++P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+ + +LSACS +G ++ G D A + + +VDM + G +++A +
Sbjct: 354 DKITLAGVLSACSAVGALELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 362 IRNMPTE 368
R MP +
Sbjct: 413 FRKMPCK 419
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 241/402 (59%), Gaps = 4/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ + R LF+ + P F +NT+++ Y K +++ ++ +M G+RPD FT+PFV+K
Sbjct: 85 MSYARQLFDEMHKPRP-FLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIK 143
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + G +H + K GL+ + L+ MY E+ A+ +F M RD+V+
Sbjct: 144 ACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVA 203
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+++IA V S AL+ F M +A P+SVT+VS +SAC L + GE I+ +A
Sbjct: 204 WNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAR 263
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G++ ++ + A ++M +KCG ++KA +F+ M ++N+ SW+ +I G A NG A++
Sbjct: 264 EEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALA 323
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV--YNIKPTMEHYGCMVD 347
LF++M G++P+ ++F A+LSACSH G V+EG YF+ MA+ NI+P EHY CMVD
Sbjct: 324 LFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVD 383
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
+LGR+G +EEAY+ I+ MP E + I + LGAC H Q + L ++ LL +L PE+ +
Sbjct: 384 LLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH-QNIKLGQHVADLLFELAPEIAS 442
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+VL +++ + +G W ++ + +KG KV S V+ N
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFN 484
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 265/472 (56%), Gaps = 20/472 (4%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNNLPVT 63
T++Q + L QLH L+T+ + + + S S S +++ +F+++
Sbjct: 30 TVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE-N 88
Query: 64 PPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGG 121
F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC G
Sbjct: 89 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 148
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH I K G D Y+ N L+ +Y +C +D+A+ VF+EMP R +VSW+SMI V
Sbjct: 149 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 208
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLELDVA 238
AL++F M+ + E P+ T+ S++SAC L ++ G H++ + + +DV
Sbjct: 209 EYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 267
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI--Q 296
+ +L+EMY KCG + A +VF M++++L SW MI G A +GR A++ F +M+ +
Sbjct: 268 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 327
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
++P+S++F +L AC+H G V++G+ YFD M R Y I+P +EHYGC+VD++ RAG I
Sbjct: 328 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 387
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-------LGANY 409
EA ++ +MP +P+AVI RS L AC G + L + + + ++ + + Y
Sbjct: 388 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 447
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
VL + V + + W+ + +++ G+ K PGCS +++N S E + +T+
Sbjct: 448 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 499
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 224/387 (57%), Gaps = 10/387 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ TLI Y +++F +ML + + F++ V+AC G +H+ +
Sbjct: 178 SWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAV 237
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G +S+ + N++L MY C A F EM RD+++W+++IAG+ +P+++L
Sbjct: 238 TKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER-SNPTESL 296
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
VF M+ SPN T S+++AC +L + G+ IH + GL+ ++AL AL++MY
Sbjct: 297 YVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMY 356
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG++ + +VF M ++L SWT M+ G +G G A+ LF KM+++G++PD + F
Sbjct: 357 SKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFM 416
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
AILSACSH GLVDEG YF M YNI P E YGC+VD+LGRAG +EEAY +I +MP
Sbjct: 417 AILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPF 476
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWD 423
+P+ + FLGAC+ H NLGKL +L L P + YV+ +++ + G W
Sbjct: 477 KPDECVWGPFLGACKAH-----TFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWG 531
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
A L + + G K G SWV+V +
Sbjct: 532 EFARLRKLMKRMGNKKETGRSWVEVGN 558
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 4/313 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF+ +P + A+ +I Y + + +F EM+ L P+ FT V+KAC
Sbjct: 63 RTLFDEMP-ERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKG 121
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRDVVSWSS 172
+ G VH L K GLD Y+ N L+ MYA C +D A VF + +++ VSW++
Sbjct: 122 MKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTT 181
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IAG+ D L+VF +M L N + V ACTS+ + GE +H+ +G
Sbjct: 182 LIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHG 241
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
E ++ + ++++MY +C +A + F M +++L +W +I+G + ++ +F+
Sbjct: 242 FESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFS 300
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M G P+ +F++I++AC+ L ++ G+ + R + + ++DM +
Sbjct: 301 MMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR-RGLDGNLALSNALIDMYSKC 359
Query: 353 GLIEEAYHIIRNM 365
G I +++ + M
Sbjct: 360 GNIADSHQVFGGM 372
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ TL++ Y I A+ +F+EMP RDVV+W+ MIAG+ +C++ + A VF M
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG-HVEKA 256
PN+ T+ S++ AC + + G +H A+ +GL+ + + AL++MY+ C ++ A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
VF + KN SWT +I+G G + +F +M+ ++ + SFS + AC+ +
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224
Query: 317 G 317
G
Sbjct: 225 G 225
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H ++ LD N + + I + S ++ + +F + L ++ ++ Y
Sbjct: 331 QQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS-RRDLVSWTAMMIGYGT 389
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF-KVGLDSDKY 137
E+++LFD+M+++G+RPD + ++ AC L+ G L+ + D+
Sbjct: 390 HGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQE 449
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPSDALKVFHRM 193
I ++ + +++ A + E MP + D W + A P+ HR+
Sbjct: 450 IYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRI 506
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 241/436 (55%), Gaps = 42/436 (9%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
LH R LF+ + P + YNT+ R YA + + ++ L ML+ G PD +T+PF++K
Sbjct: 38 LHHARLLFDAIH-HPSTYLYNTMFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLK 96
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID---------------- 153
AC + G +H K GL ++ N+L+ +Y + +D
Sbjct: 97 ACSALAHLPKGQELHCQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIAS 156
Query: 154 ---------------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
A+ VF+EMP R V+S+S+MIA +V + +AL +F +
Sbjct: 157 WTTLLACYANSCSVKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKI 216
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTALVEMYSKCGHVEKAF 257
P+ ++S++ AC +L + G ++SY + G +D + TAL++M+ KCG +E A
Sbjct: 217 EPSDSCVMSVLCACANLGALDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHAL 276
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF +EK++ WT M+SGLA +G G I F KM+ +G+KP+ ++F A+LS CSH G
Sbjct: 277 LVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSG 336
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV+EG YFD M + ++PT+EH+GC+VD+LGRAGLI++A +I MP EPNA I S
Sbjct: 337 LVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSL 396
Query: 378 LGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
L ACR +Y + +G+L L+K EP GA Y+ S+ +G WD ++ + +
Sbjct: 397 LNACR-----VYKNVEIGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMK 451
Query: 434 QKGLNKVPGCSWVKVN 449
+ G K PGCS ++V
Sbjct: 452 EVGCRKGPGCSLIEVG 467
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 255/430 (59%), Gaps = 5/430 (1%)
Query: 23 HTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K L+ H+ + S + S R +F+ +P T + ++N +++AY +
Sbjct: 175 HALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIP-TRDVVSWNAMMKAYGRVGM 233
Query: 82 SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ E ++F +M+K G + P+ T V+ AC + +G V + ++ D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
LL MY C EI A+ VF+ + +D+V+W++MI G+ ++A+ +FH M++A P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TL ++SAC+++ + G + YA GL +V +GTALV+MY+KCG ++KA +VF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLV 319
M KN+ SW +I GLA NGRG+ AI F M + GLKPD I+F +LSAC H GLV
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+GK +F+ + + I P +EHY CMVD+L R+G +EEA+ I +P + +AV+L + L
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR V + + + +++LEP NYV+++ + + S D +A++ + ++G+NK
Sbjct: 534 ACRKCKNV-EIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 440 VPGCSWVKVN 449
PGCSWV+V+
Sbjct: 593 TPGCSWVEVS 602
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 175/307 (57%), Gaps = 3/307 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F+YN IR +A +S S++LF ML++ +RPD++T PF++ A R + +
Sbjct: 115 APTAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARA 173
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+L+ K+GL+ + ++L+ MY+ + A+ VF+ +P RDVVSW++M+ +
Sbjct: 174 AHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 183 PSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ ++F M K +PN VT+ +++AC ++ G + ++ +E+D +G+
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL+ MY KCG + +A +VF+ + +K++ +W MI+G A NG N AISLF M G++P
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+ + +LSACS +G ++ G D A + + +VDM + G +++A +
Sbjct: 354 DKITLAGVLSACSAVGALELGSE-LDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 362 IRNMPTE 368
R MP +
Sbjct: 413 FRKMPCK 419
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 227/382 (59%), Gaps = 3/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NTLI + + E++++F+EML G+ PD T V+ AC + + G VHS I
Sbjct: 290 SWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYI 349
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
G+ D + N+L+ MYA C ++ A+ VF+ M +DVVSW+ M+ G+V + A
Sbjct: 350 KDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAF 409
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F MK+A + + LVSL+SAC+ L + G IHSY + D+ L +ALV+MY
Sbjct: 410 NLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMY 469
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISF 306
+KCG ++ A ++F M+ K SW MI GLA NG G A+ LF +M++ KPD I+
Sbjct: 470 AKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITL 529
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
A+L AC+H+G+VDEG YF M+ + + P EHYGC+VD+LGRAG+++EA+H I+ MP
Sbjct: 530 KAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMP 588
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EPN VI S L ACR H + + L +G+ ++ + P +VL +++ + WD
Sbjct: 589 IEPNPVIWGSLLAACRVHHR-MDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVE 647
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
+ + +G+ K PG S V+V
Sbjct: 648 HVRGLMGSRGIEKTPGHSSVQV 669
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 167/330 (50%), Gaps = 12/330 (3%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLF 57
I H+ + + HL +LH ++ L ++ + R I S + + + R +F
Sbjct: 16 IRHHLLAYLDACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVF 75
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + P F +N +IR Y+ +++ +F EM + G+ PDN+T
Sbjct: 76 DGM-AQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYT--MAAVVSASAAFA 132
Query: 118 GI-----GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G+ G ++H+L+ ++G SD ++ + L+ Y A + + A VFEEM RDVVSW+S
Sbjct: 133 GLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTS 192
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+ C LK+ M+ PN VT++SL+SAC V G +++ G
Sbjct: 193 MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFG 252
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E DV + AL+ MY+KCG + A + F M + +SW +I G N A+ +F
Sbjct: 253 IEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFE 312
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+M+ G+ PD I+ ++LSAC+ LG + +G
Sbjct: 313 EMLLHGVTPDGITLVSVLSACAQLGELRKG 342
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 184/374 (49%), Gaps = 48/374 (12%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ ++I A A+ + +K+ EM G+ P+ T ++ ACG+ + G V++
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYN 246
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G+++D I N L+ MY C + A F+ MP R SW+++I GFV +
Sbjct: 247 QVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKE 306
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F M L +P+ +TLVS++SAC L +R G +HSY NG+ D L +L+
Sbjct: 307 ALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLIN 366
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A +VF M +K++ SWT+M+ G + A +LF +M + ++
Sbjct: 367 MYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMA 426
Query: 306 FSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++LSACS LG +D+G+ +Y +EM N+ + +VDM + G I+ A I
Sbjct: 427 LVSLLSACSQLGALDKGREIHSYIEEM----NVAKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 363 RNMP-----------------------------------TEPNAVILRSFLGACRNHGQV 387
R M +P+ + L++ LGAC + G V
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 388 ------LYLDDNLG 395
YL +LG
Sbjct: 543 DEGLRYFYLMSSLG 556
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 133/252 (52%), Gaps = 7/252 (2%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYA---ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+H + + L SD ++ L+ + A A ++ A+ VF+ M + W+ MI G+ +
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR---AGESIHSYAVVNGLELD 236
C++P DAL VF M+ SP++ T+ ++VSA + ++ G++IH+ G D
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
V + + LV Y V++A KVF M E+++ SWT MIS A G + + + ++M
Sbjct: 156 VFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+ P+ ++ ++LSAC VDEG+ ++++ + + I+ ++ ++ M + G +
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK-FGIEADVDIRNALISMYTKCGCLS 274
Query: 357 EAYHIIRNMPTE 368
+A + MP
Sbjct: 275 DALEAFQAMPAR 286
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 249/466 (53%), Gaps = 40/466 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIR 74
++ L Q+ L+ ++H + I++ L I S+ + LF+ +P P +F YN LI+
Sbjct: 1 MNRLKQIQAYTLRNGIEHT----KQLIVSLLQIPSIPYAHKLFDFIP-KPTVFLYNKLIQ 55
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
AY+ + L+ +M G P+ ++ F+ AC G +H+ K G
Sbjct: 56 AYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGC 115
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D + L+ MYA + +A+ F+EM VRDV +W+SMIAG+ C AL++F M
Sbjct: 116 DVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMP 175
Query: 195 LANES--------------------------------PNSVTLVSLVSACTSLINVRAGE 222
N + PN VTL S++ AC +L + GE
Sbjct: 176 ARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGE 235
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADN 281
I YA NG ++ + AL+EMY++CG ++KA+ VF + +NL SW MI GLA +
Sbjct: 236 RIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVH 295
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GR + AI LF KM++ G PD ++F +L AC+H G+V EG+++F+ M R ++I P +EH
Sbjct: 296 GRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEH 355
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCMVD+LGRAG + EA+ +I MP EP++V+ + LGAC HG V + G L +L
Sbjct: 356 YGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGA-LFEL 414
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
EP NYV+ +++ + +G WD A L + + K G S+++
Sbjct: 415 EPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIE 460
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 224/387 (57%), Gaps = 10/387 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ TLI Y +++F +ML + + F++ V+AC G +H+ +
Sbjct: 162 SWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAV 221
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G +S+ + N++L MY C A F EM RD+++W+++IAG+ +P+++L
Sbjct: 222 TKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER-SNPTESL 280
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
VF M+ SPN T S+++AC +L + G+ IH + GL+ ++AL AL++MY
Sbjct: 281 YVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMY 340
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG++ + +VF M ++L SWT M+ G +G G A+ LF KM+++G++PD + F
Sbjct: 341 SKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFM 400
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
AILSACSH GLVDEG YF M YNI P E YGC+VD+LGRAG +EEAY +I +MP
Sbjct: 401 AILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPF 460
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWD 423
+P+ + FLGAC+ H NLGKL +L L P + YV+ +++ + G W
Sbjct: 461 KPDECVWGPFLGACKAH-----TFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWG 515
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
A L + + G K G SWV+V +
Sbjct: 516 EFARLRKLMKRMGNKKETGRSWVEVGN 542
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 160/322 (49%), Gaps = 19/322 (5%)
Query: 60 LPVTPPLFAYNTLIRAY-------------AKTSCS--IESIKLFDEMLKTGLRPDNFTY 104
+P P + A TLI++Y TSC+ + +F EM+ L P+ FT
Sbjct: 38 IPKGPSVLA-TTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTI 96
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMP 163
V+KAC + G VH L K GLD Y+ N L+ MYA C +D A VF +
Sbjct: 97 SSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIH 156
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+++ VSW+++IAG+ D L+VF +M L N + V ACTS+ + GE
Sbjct: 157 LKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQ 216
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+ +G E ++ + ++++MY +C +A + F M +++L +W +I+G +
Sbjct: 217 LHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSN 275
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
++ +F+ M G P+ +F++I++AC+ L ++ G+ + R + +
Sbjct: 276 PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR-RGLDGNLALSN 334
Query: 344 CMVDMLGRAGLIEEAYHIIRNM 365
++DM + G I +++ + M
Sbjct: 335 ALIDMYSKCGNIADSHQVFGGM 356
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H ++ LD N + + I + S ++ + +F + L ++ ++ Y
Sbjct: 315 QQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS-RRDLVSWTAMMIGYGT 373
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF-KVGLDSDKY 137
E+++LFD+M+++G+RPD + ++ AC L+ G L+ + D+
Sbjct: 374 HGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQE 433
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPSDALKVFHRM 193
I ++ + +++ A + E MP + D W + A P+ HR+
Sbjct: 434 IYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRI 490
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 232/397 (58%), Gaps = 4/397 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+++P ++N++I YA E++ LFD+ML+ G P+ T V C +
Sbjct: 164 RRLFDSMPRKTSA-SWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAK 222
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G + + + L + + L+ MY C+ ID A+ F+ MP RDVV+WS+M
Sbjct: 223 TGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTM 281
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ P ++L++F RMK N PN VTLV ++SAC L + GE I SY L
Sbjct: 282 IAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTL 341
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
L LG+AL++MY+KCGHV +A VF+ M +K + +W MI GLA NG AI+L+ +
Sbjct: 342 PLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGE 401
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRA 352
M+ G++P+ I+F A+L+AC+H GLVD+G +F EM + + P +EH C+VD+L ++
Sbjct: 402 MVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKS 461
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G + EAY I +M EPNAVI + L ACR H V GKL++ LEP + YVL
Sbjct: 462 GRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVV-LEPNSSSIYVLL 520
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W E+ + K L K+ SW++++
Sbjct: 521 SNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 169/398 (42%), Gaps = 66/398 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +P P + +K S E I+ + + G + P V+K+C
Sbjct: 32 RHLFDAVP-RPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----- 168
G H G+ D ++ L+ YA +D A FEEMP++D +
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 169 --------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
SW+SMIA + +AL +F +M SPN+
Sbjct: 151 IIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T+ ++ S C ++ G ++ L+ +V + TAL+EMY KC +++A + F+
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAIDEARREFDR 269
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +++ +W+ MI+G + NGR + ++ LF +M T KP+ ++ +LSAC+ LG + G
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 329
Query: 323 K---NYFD----------------------EMARVYNIKPTMEH-----YGCMVDMLGRA 352
+ +Y + +AR ++ ME + M+ L
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389
Query: 353 GLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHGQV 387
G E+A + M +PN + + L AC + G V
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLV 427
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 255/446 (57%), Gaps = 25/446 (5%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-------TRSLFNNLPVTPPLFA 68
+H +H +K+ D N+ F++T L + L+F S+F+ L T L +
Sbjct: 254 LHQGKWVHGYVIKSGFDLNS-----FLVTPL-LDLYFKCGDIRDAFSVFDELS-TIDLVS 306
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +I YA+ E++KLF + L P+ T V+ AC + + +G SVH L
Sbjct: 307 WTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGI 366
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G D N L+ MYA C I A+ VFE + +DV++W+S+I+G+ +AL+
Sbjct: 367 KLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALE 425
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMY 247
+F +M+ + P+++TLVS++SAC S+ R G S+H YA+ GL V +GTAL+ Y
Sbjct: 426 LFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFY 485
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG E A +F+ M EKN +W+ MI G G + ++ LF M++ L+P+ + F+
Sbjct: 486 AKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFT 545
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
ILSACSH G++ EG YF+ M +VYN P+M+HY CMVD+L RAG +EEA I +P
Sbjct: 546 TILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPI 605
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWD 423
+P+ +L +FL CR H + +LG++ +L+L P+ YVL +++ + G W
Sbjct: 606 QPDVSLLGAFLHGCRLHSRF-----DLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWS 660
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
A ++M + Q+GL K+PG S V +
Sbjct: 661 QANQVMELMKQRGLAKLPGWSLVDIE 686
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 190/360 (52%), Gaps = 6/360 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPL 66
+L+ + KTV L ++H L + L + ++ + S + R +F+ + P L
Sbjct: 44 SLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIR-NPDL 102
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSVHS 125
+++ +IR Y E ++ ++ L+ L DN + V+KAC G +H
Sbjct: 103 YSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHC 162
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I KVG D ++ L+ MYA C+E++ ++ VF+E+ R+VV W+SMI G+V D +
Sbjct: 163 QIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKE 221
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L +F+RM+ N TL SLV+ACT L + G+ +H Y + +G +L+ L T L++
Sbjct: 222 GLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLD 281
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+Y KCG + AF VF+ + +L SWT MI G A G A+ LF L P++++
Sbjct: 282 LYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVT 341
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
S++LSAC+ G ++ G++ ++ + T E+ +VDM + +I +A ++ +
Sbjct: 342 TSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFEN--ALVDMYAKCHMIGDARYVFETV 399
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/443 (34%), Positives = 247/443 (55%), Gaps = 35/443 (7%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVK 109
F R LF+ PV + ++NTLI Y ++ E+++LF + + G +RPD T V
Sbjct: 174 FARRLFDESPVRD-VVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVS 232
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE--------- 160
C + + +G +H + G+ + N ++ MY C +++A +VFE
Sbjct: 233 GCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVS 292
Query: 161 ----------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
EMP RDV W++++AG+V +A+ +FH M+ +
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKV 352
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN +T+V+L+SAC+ L + G +H Y + L L VALGT+LV+MY+KCG+++KA
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VFN + +N +WT MI GLA++G + AI F +MI GL+PD I+F +LSAC H GL
Sbjct: 413 VFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+ G+ +F M Y+++ M+HY CM+D+LGRAG ++EA ++ MP +P+AV+ +
Sbjct: 473 VEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALF 532
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR HG + L + L++L+P YVL A++ + + A ++ V + G+
Sbjct: 533 FACRMHGNIT-LGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVE 591
Query: 439 KVPGCSWVKVNDGSAEEMSKETA 461
KVPGCS +++N E + K+ +
Sbjct: 592 KVPGCSCIELNGVVHEFIVKDKS 614
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 193/394 (48%), Gaps = 50/394 (12%)
Query: 55 SLFNNLPVTPP--LFAYNTLIRAYA----KTSCSIESIKLFDEMLKTG-LRPDNFTYPFV 107
++ +LP +PP F YN RA + + + L+ +L +G RPD+ T+PF+
Sbjct: 69 AILASLP-SPPDSAFPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFL 127
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
+KAC R G +V + K+G +D ++ N + ++ + A+ +F+E PVRDV
Sbjct: 128 IKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDV 187
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIH 225
VSW+++I G+V P +AL++F R+ + P+ VT++ VS C + ++ G+ +H
Sbjct: 188 VSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLH 247
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI---------- 275
+ G+ V L A+++MY KCG +E A VF + + SWT MI
Sbjct: 248 EFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMME 307
Query: 276 ---------------------SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+G N +G AI+LF +M ++ + P+ I+ +LSACS
Sbjct: 308 DARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACS 367
Query: 315 HLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
LG ++ G +Y D + + ++ +VDM + G I++A + +P + NA
Sbjct: 368 QLGALEMGMWVHHYIDR----HKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NA 422
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLL-LKLEPE 404
+ S + NHG + +++ L L+P+
Sbjct: 423 LTWTSMICGLANHGHADEAIEYFQRMIDLGLQPD 456
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 227/382 (59%), Gaps = 3/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NTLI + + E++++F+EML G+ PD T V+ AC + + G VHS I
Sbjct: 290 SWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYI 349
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
G+ D + N+L+ MYA C ++ A+ VF+ M +DVVSW+ M+ G+V + A
Sbjct: 350 KDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAF 409
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F MK+A + + LVSL+SAC+ L + G IHSY + D+ L +ALV+MY
Sbjct: 410 NLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMY 469
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISF 306
+KCG ++ A ++F M+ K SW MI GLA NG G A+ LF +M++ KPD I+
Sbjct: 470 AKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITL 529
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
A+L AC+H+G+VDEG YF M+ + + P EHYGC+VD+LGRAG+++EA+H I+ MP
Sbjct: 530 KAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMP 588
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EPN VI S L ACR H + + L +G+ ++ + P +VL +++ + WD
Sbjct: 589 IEPNPVIWGSLLAACRVHHR-MDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVE 647
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
+ + +G+ K PG S V+V
Sbjct: 648 HVRGLMGSRGIEKTPGHSSVQV 669
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 168/330 (50%), Gaps = 12/330 (3%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLF 57
I H+ + + HL +LH ++ L ++ + R I S + + + R +F
Sbjct: 16 IRHHLLAYLDACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVF 75
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + P F +N +IR Y+ +++ +F EM + G+ PDN+T
Sbjct: 76 DGM-AQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYT--MAAVVSASAAFA 132
Query: 118 GI-----GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G+ G ++H+L+ ++G SD ++ + L+ Y A + ++ A VFEEM RDVVSW+S
Sbjct: 133 GLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTS 192
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+ C LK+ M+ PN VT++SL+SAC V G +++ G
Sbjct: 193 MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFG 252
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E DV + AL+ MY+KCG + A + F M + +SW +I G N A+ +F
Sbjct: 253 IEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFE 312
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+M+ G+ PD I+ ++LSAC+ LG + +G
Sbjct: 313 EMLLHGVTPDGITLVSVLSACAQLGELRKG 342
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 184/374 (49%), Gaps = 48/374 (12%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ ++I A A+ + +K+ EM G+ P+ T ++ ACG+ + G V++
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYN 246
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G+++D I N L+ MY C + A F+ MP R SW+++I GFV +
Sbjct: 247 QVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKE 306
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F M L +P+ +TLVS++SAC L +R G +HSY NG+ D L +L+
Sbjct: 307 ALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLIN 366
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A +VF M +K++ SWT+M+ G + A +LF +M + ++
Sbjct: 367 MYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMA 426
Query: 306 FSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++LSACS LG +D+G+ +Y +EM N+ + +VDM + G I+ A I
Sbjct: 427 LVSLLSACSQLGALDKGREIHSYIEEM----NVAKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 363 RNMP-----------------------------------TEPNAVILRSFLGACRNHGQV 387
R M +P+ + L++ LGAC + G V
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 388 ------LYLDDNLG 395
YL +LG
Sbjct: 543 DEGLRYFYLMSSLG 556
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 133/252 (52%), Gaps = 7/252 (2%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYA---ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+H + + L SD ++ L+ + A A ++ A+ VF+ M + W+ MI G+ +
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR---AGESIHSYAVVNGLELD 236
C++P DAL VF M+ SP++ T+ ++VSA + ++ G++IH+ G D
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
V + + LV Y VE+A KVF M E+++ SWT MIS A G + + + ++M
Sbjct: 156 VFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+ P+ ++ ++LSAC VDEG+ ++++ + + I+ ++ ++ M + G +
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK-FGIEADVDIRNALISMYTKCGCLS 274
Query: 357 EAYHIIRNMPTE 368
+A + MP
Sbjct: 275 DALEAFQAMPAR 286
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 258/480 (53%), Gaps = 45/480 (9%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
+Q K+ + ++H + L ++ ++++ + L + + LFN + P +F
Sbjct: 16 FLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVS-NPNVF 74
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKAC---GRCLLIGIGGSV 123
YN++IRAY S + I+++ ++L+ + PD FT+PF+ K+C G C L G V
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYL---GKQV 131
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS----------- 172
H ++K G N L+ MY ++ A VF+EM RDV+SW+S
Sbjct: 132 HGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQM 191
Query: 173 --------------------MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
MI+G+ +A+ F M+LA P+ ++L+S++ +C
Sbjct: 192 KKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSC 251
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L ++ G+ IH YA GL + AL+EMYSKCG + +A ++F + K++ SW+
Sbjct: 252 AHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWS 311
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MISG A +G + A F +M + +KP+ I+F +LSACSH+GL +G YFD M +
Sbjct: 312 TMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQD 371
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y I+P +EHYGC++D+L RAG +E A I + MP +P++ I S L +CR G LD
Sbjct: 372 YQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGN---LDV 428
Query: 393 NLGKL--LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L + L+++EP+ NYVL A++ + G W+ + L I ++ + K PGCS ++VN+
Sbjct: 429 ALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNN 488
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 260/436 (59%), Gaps = 7/436 (1%)
Query: 20 HQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
QLH+ ++ L + C+ I+ + S+ S+ R +F+ + + +F++ +I
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFSWTAMITG 349
Query: 76 YA-KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y K E++ LF M+ T + P++FT+ +KAC + IG V + K+G S
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ N+L+ MYA ID A+ F+ + ++++S++++I + + +AL++F+ ++
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
++ T SL+S S+ + GE IH+ + +GL+L+ ++ AL+ MYS+CG++E
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
AF+VF M ++N+ SWT +I+G A +G A+ LF KM++ G++P+ +++ A+LSACS
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACS 589
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H+GLV+EG +F M + + P MEHY C+VD+LGR+G + EA I +MP + +A++
Sbjct: 590 HVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
R+FLGACR HG L L + K++++ EP A Y+L +++ + WD + + A+ +
Sbjct: 650 RTFLGACRVHGN-LELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKE 708
Query: 435 KGLNKVPGCSWVKVND 450
K L K GCSWV+V +
Sbjct: 709 KXLIKEAGCSWVEVEN 724
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 163/314 (51%), Gaps = 15/314 (4%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F + + L +++ ++ +A + ++ F +M++ G P+ + + +AC
Sbjct: 122 SIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTA 181
Query: 115 LLIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSS 172
+ +G S+ + K G L SD +G L+ M+ + ++ A VFE+MP R+ V+W+
Sbjct: 182 EFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTL 241
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI + +A+ +F M + P+ TL ++SAC ++ + G+ +HS A+ +G
Sbjct: 242 MITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301
Query: 233 LELDVALGTALVEMYSKC---GHVEKAFKVFNLMREKNLQSWTIMISG-LADNGRGNYAI 288
L LD +G L+ MY+KC G + A K+F+ + + N+ SWT MI+G + G A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC---- 344
LF MI T + P+ +FS+ L AC++L + G+ F + +K C
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANS 416
Query: 345 MVDMLGRAGLIEEA 358
++ M R+G I++A
Sbjct: 417 LISMYARSGRIDDA 430
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 129/251 (51%), Gaps = 3/251 (1%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++I + M+ G PD TY +K C R IG VH + + L D N+L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 144 RMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
+Y+ C + + A ++F M RD++SWS+M++ F + AL F M PN
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSKC-GHVEKAFKVF 260
+ AC++ V G+SI + + G L+ DV +G L++M+ K G + AFKVF
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M E+N +WT+MI+ L G AI LF MI +G +PD + S ++SAC+++ L+
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288
Query: 321 EGKNYFDEMAR 331
G+ + R
Sbjct: 289 LGQQLHSQAIR 299
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 237/394 (60%), Gaps = 6/394 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +PV + ++ +I + +T E++ F +M + P+ TY V+ + GR
Sbjct: 163 VFGEMPVRD-VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVG 218
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H LI K GN L+ MY C+++ A VF E+ +D VSW+SMI+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 176 GFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G V C+ +A+ +F M+ ++ P+ L S++SAC SL V G +H Y + G++
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D +GTA+V+MY+KCG++E A ++FN +R KN+ +W ++ GLA +G G ++ F +M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAG 353
++ G KP+ ++F A L+AC H GLVDEG+ YF +M +R YN+ P +EHYGCM+D+L RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L++EA +++ MP +P+ I + L AC+N G ++ L + L +E E YVL +
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
++ + + WD A + + KG++KVPG S+++
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 190/391 (48%), Gaps = 24/391 (6%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL----------SISLHFTRSLFN 58
LI ++ Q+ T + L + II++ ++T L S+ LH RS+ +
Sbjct: 12 LISRCSSLRVFKQIQTQLITRDLLRDDLIINK-VVTFLGKSADFASYSSVILHSIRSVLS 70
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+ F+YNTL+ +YA +I + + G PD FT+P V KACG+ I
Sbjct: 71 S-------FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H ++ K+G D Y+ N+L+ Y C E A VF EMPVRDVVSW+ +I GF
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+AL F +M + PN T V ++ + + + G+ IH + + +
Sbjct: 184 RTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQT 297
G AL++MY KC + A +VF + +K+ SW MISGL R AI LF+ M +
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G+KPD +++LSAC+ LG VD G+ + E IK +VDM + G IE
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGR-WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
A I + ++ N + LG HG L
Sbjct: 360 ALEIFNGIRSK-NVFTWNALLGGLAIHGHGL 389
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 228/387 (58%), Gaps = 3/387 (0%)
Query: 68 AYNTLIRAYAKTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++N++I A + + S+ +++K F +M++ G T+ ++ A L + +H+L
Sbjct: 404 SWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHAL 463
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSD 185
+ K L D IGN LL Y C E++ + +F M RD VSW+SMI+G++ +
Sbjct: 464 VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHK 523
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ + M + +S T +++SAC S+ + G +H+ + LE DV +G+ALV+
Sbjct: 524 AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVD 583
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKCG ++ A + F LM +N+ SW MISG A +G G A+ LF +M+ G PD ++
Sbjct: 584 MYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVT 643
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSACSH+G V+EG +F M+ VY + P +EH+ CMVD+LGRAG ++E I +M
Sbjct: 644 FVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM 703
Query: 366 PTEPNAVILRSFLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
P +PN +I R+ LGA CR +G+ L ++LL+LEP+ NYVL A++ + W+
Sbjct: 704 PMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWED 763
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDG 451
A+ A+ + + K GCSWV + DG
Sbjct: 764 VAKARTAMKEAAVKKEAGCSWVTMKDG 790
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
HQ+H L LK L +T I + + ++ +F + T ++N++I Y
Sbjct: 458 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 517
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+++ L M++ G R D+FT+ ++ AC + G VH+ + L+SD +
Sbjct: 518 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVV 577
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G+ L+ MY+ C ID A FE MP+R+V SW+SMI+G+ ALK+F RM L +
Sbjct: 578 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 637
Query: 199 SPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ VT V ++SAC+ + V G E S + V L V + +V++ + G +++
Sbjct: 638 PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 697
Query: 258 KVFNLMREK-NLQSW-TIMISGLADNGR 283
N M K N+ W T++ + NGR
Sbjct: 698 DFINSMPMKPNVLIWRTVLGACCRANGR 725
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG--IGGSV 123
L + LI Y + E+ F +M++ G P+++ + ++AC G +G +
Sbjct: 165 LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 224
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H LI K SD + N L+ MY +C + A++VF+ + +R+ +SW+S+I+ +
Sbjct: 225 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGD 284
Query: 183 PSDALKVFHRMK-----LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELD 236
A +F M+ + + ++ + S++ R G +H++ + GL +
Sbjct: 285 AVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDNK 339
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
VA+G LV MY+K G + A VF LM EK+ SW +ISGL N A +F+ M +
Sbjct: 340 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPE 399
Query: 297 TGLKPDSISFSAILSACSHL-GLVDEGKNYFDEMAR 331
D +S+++++ A S V + YF +M R
Sbjct: 400 Y----DQVSWNSVIGALSDSEASVSQAVKYFLQMMR 431
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H K G + ++ NTL+ +Y ++ A+ +F+EM R++V+W+ +I+G+
Sbjct: 121 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 180
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSAC--TSLINVRAGESIHSYAVVNGLELDVALG 240
P +A F M A PN S + AC + + G IH DV +
Sbjct: 181 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 240
Query: 241 TALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
L+ MY C A VF+ + +N SW +IS + G A LF+ M + GL
Sbjct: 241 NVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGL 300
Query: 300 ----KPDSISFSAILSACSHLGLVDEGK 323
KP+ A S +++EG+
Sbjct: 301 GFSFKPN--------DAFSEFSVLEEGR 320
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 202 SVTLVSLVSACTSLINVRAG-------ESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ TL S SLIN G +H ++ G ++ L L+ +Y + G +
Sbjct: 92 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 151
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A K+F+ M +NL +W +ISG NG+ + A + F M++ G P+ +F + L AC
Sbjct: 152 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 211
Query: 315 HLG 317
G
Sbjct: 212 ESG 214
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 239/394 (60%), Gaps = 6/394 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +PV + ++ +I + +T E++ F +M + P+ TY + + GR
Sbjct: 163 VFDQMPVRD-VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCALVSSGRVG 218
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H LI K GN L+ MY C+++ A VF E+ +D VSW+SMI+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMIS 278
Query: 176 GFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G V C+ ++A+++F M+ ++ P+ L S++SAC SL V G +H Y + G++
Sbjct: 279 GLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIK 338
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D +GTA+V+MY+KCG++E A K+FN +R KN+ +W ++ GLA +G G+ ++ F +M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEM 398
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAG 353
++ G KP+ ++F AIL+AC H GLVDEG+ YF +M R YN+ P +EHYGC++D+ RAG
Sbjct: 399 VKLGFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAG 458
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L++EA +I+ MP +P+ I + L AC++ G ++ L + L++E E YVL +
Sbjct: 459 LLDEALELIKAMPVKPDVRICGAVLSACKSRGTLMELPKEILDSFLEMEFEDSGVYVLLS 518
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
++ + + WD + + + KG++KVPG S ++
Sbjct: 519 NIFAANRRWDDVSRIRRLMKVKGISKVPGSSSIE 552
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 177/350 (50%), Gaps = 25/350 (7%)
Query: 44 TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT 103
T S+ LH RS+ ++ F+YNTL+ +YA +I ++ + G PD FT
Sbjct: 56 TYSSVILHSIRSVLSS-------FSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFT 108
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
+P V KACG+ I G +H + K+G D Y+ N+L+ Y C E A VF++MP
Sbjct: 109 FPPVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMP 168
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV-SLVSA----CTSLINV 218
VRDVVSW+ +I GF +AL F +M + PN T V +LVS+ C SL
Sbjct: 169 VRDVVSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVCALVSSGRVGCLSL--- 222
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ IH + + + G AL++MY KC + A VF +++K+ SW MISGL
Sbjct: 223 --GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGL 280
Query: 279 ADNGRGNYAISLFAKMIQT--GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
R N AI LF+ M+QT G+KPD +++LSAC+ LG VD G+ + E IK
Sbjct: 281 VHCERSNEAIELFS-MMQTSSGIKPDGHILTSVLSACASLGAVDYGR-WVHEYVLSAGIK 338
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G IE A I N N + LG HG
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALKIF-NGIRRKNVFTWNALLGGLAIHGH 387
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 229/383 (59%), Gaps = 2/383 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++I Y K C E++ L+ +M + G PD T +V AC +G+G +HS I
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
++ + +G+ L+ MYA C ++ A+ VF+++ +DV +WS++I G+V + ++AL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 189 VFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F + +N PN VT+++++SAC L ++ G +H Y V+L +L++M+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG ++ A ++F+ M K+L SW M++G A +G G A++ F M T L+PD I+F
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L+ACSH GLV EGK F E+ +Y ++ EHYGCMVD+L RAGL+ EA IR MP
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+ I S LGACR + L L + + LLKLEP Y+L +++ + W+ +
Sbjct: 448 QPDGAIWGSMLGACRVYNN-LELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ +N+KG+ K PGCS V +++
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDN 529
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 177/302 (58%), Gaps = 3/302 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGGSVH 124
+ +N+++RA+ ++ +++ + EML+ PD FT+P ++K C L +G +H
Sbjct: 43 VLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLH 102
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K L SD YI TLL MYAAC ++ A+ +FE M R+ V W+SMI+G++ P+
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL ++ +M+ SP+ VT+ +LVSAC L ++ G +HS+ +++ LG+ALV
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDS 303
MY+KCG ++ A +VF+ + +K++ +W+ +I G N R A+ LF ++ + ++P+
Sbjct: 223 NMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNE 282
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++ A++SAC+ LG ++ G+ D + R ++ ++DM + G I+ A I
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFD 341
Query: 364 NM 365
+M
Sbjct: 342 SM 343
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 235/392 (59%), Gaps = 1/392 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N+LI + +++ F +M ++ D +T P V+ + ++ SVH LI
Sbjct: 8 SWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G ++ K + N L+ MYA ++D A VF +M +DVVSW+S++ G+ S +A+
Sbjct: 68 IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K+F +M+++ P+ + + S++SAC L + G+ IH+ V +GLE +++ +LV MY
Sbjct: 128 KLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMY 187
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG + A + F+ M +++ SWT +I G A NGRG +++ + +MI TG KPD I+F
Sbjct: 188 AKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFI 247
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L ACSH GL+ G+ YF+ M +VY IKP EHY CM+D+LGR+G + EA ++ M
Sbjct: 248 GLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVV 307
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+AV+ ++ L ACR H + L L + K L +LEP YV+ +++ S +G W+ AA
Sbjct: 308 APDAVVWKALLAACRVHKE-LELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366
Query: 428 LMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+ + +G+ K PG SW++ N + MS++
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNSKVSTFMSED 398
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
M D VSW+S+I G V DAL F +M+ + + TL S++++ S+ ++
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
S+H + G E + AL++MY+K G ++ A VF+ M +K++ SWT +++G + N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G AI LF KM +G+ PD I+ +++LSAC+ L ++D G+ + + ++ ++
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSV 179
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+V M + G I +A NMPT
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTR 206
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 54/386 (13%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
K + + +H L +KT + + + I + + L +F+ + V + ++ +L
Sbjct: 55 KVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKM-VDKDVVSWTSL 113
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+ Y+ E+IKLF +M +G+ PD V+ AC ++ G +H+ + K GL
Sbjct: 114 VTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGL 173
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+S + N+L+ MYA C I A F+ MP RDV+SW+++I G+ +L+ + +
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQ 233
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M P+ +T + L+ AC+ NGL LG+ +
Sbjct: 234 MIATGTKPDYITFIGLLFACSH----------------NGL-----LGSGR-------AY 265
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
E KV+ + + + + MI L +G+ A L +M+ + PD++ + A+L+A
Sbjct: 266 FEAMDKVYGI--KPGPEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAA 320
Query: 313 CSHLGLVDEGKNYFDEMA--RVYNIKPTMEH-YGCMVDMLGRAGLIEEAYHIIRNMPT-- 367
C ++ G EMA ++ ++P Y + +M AG E+A I R M +
Sbjct: 321 CRVHKELELG-----EMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRG 375
Query: 368 ---EPNAVILR------SFLGACRNH 384
EP + +F+ RNH
Sbjct: 376 ICKEPGYSWIETNSKVSTFMSEDRNH 401
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 254/468 (54%), Gaps = 41/468 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +++ + + S + + S + + +S+F+ + V + ++N+LI Y +
Sbjct: 172 QIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRV-SWNSLITCYEQN 230
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
E++K+F EM+K G+ PD T VV AC I G +H+ + K +D +
Sbjct: 231 GPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVR-------------------------------DV 167
GN LL MYA C I+ A+ +F+ MP+R DV
Sbjct: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
++W+++IAG +AL +F +K + P T +L++AC +L +++ G HS+
Sbjct: 351 ITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSH 410
Query: 228 AVVNGLEL------DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +G DV +G +L++MY KCG VE +VF M EK+ SW MI G A N
Sbjct: 411 VLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQN 470
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G GN A+ +F KM+++G PD ++ +L ACSH GL+DEG+ YF M + + P +H
Sbjct: 471 GFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDH 530
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y CMVD+LGRAG +EEA ++I M +P+A++ S L AC+ H + L + + K LL++
Sbjct: 531 YTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNI-QLGEYVVKKLLEV 589
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+PE YVL +++ + + +W + + Q+G+ K PGCSW+++
Sbjct: 590 DPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQ 637
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 15/316 (4%)
Query: 37 IISRFILTSLSISLHFTRS--------LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKL 88
++ R I + SI FT+S +F +P ++N++I + + E++
Sbjct: 80 MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC-SWNSMISGFEQHGRFDEALVY 138
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
F +M G + +++ + AC + +G +HSL+++ SD Y+G+ L+ MY+
Sbjct: 139 FAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSK 198
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
C ++ A++VF+EM VR VSW+S+I + +ALK+F M P+ VTL S+
Sbjct: 199 CGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASV 258
Query: 209 VSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
VSAC ++ ++ G+ IH+ V + D+ LG AL++MY+KC + +A +F++M ++
Sbjct: 259 VSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRS 318
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ S T M+SG A + A +F+ M + D I+++A+++ C+ G +E F
Sbjct: 319 VVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 328 EMARVYNIKPTMEHYG 343
+ R ++ PT +G
Sbjct: 375 LLKR-ESVWPTHYTFG 389
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 31/298 (10%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
D+ + ++ C R VH+ I K S+ +I N L+ +Y C +DVA+ +F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP------------------- 200
+ M R++ SW+S+I F DA+ +F +M ++
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 201 ------------NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
N + S +SAC L +++ G IHS + DV +G+ALV+MYS
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG VE A VF+ M ++ SW +I+ NG + A+ +F +MI+ G++PD ++ ++
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++SAC+ + + EG+ + + + + ++DM + I EA I MP
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP 315
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 232/392 (59%), Gaps = 12/392 (3%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N+LI + K E+I +F + + P T V+ AC R + G +H +I
Sbjct: 173 SWNSLISGFMKAGHFDEAISVF---FRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVI 229
Query: 128 ---FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
FKV L +GN +L MY AK +F+E+P RD+VSW+ MI G V D P
Sbjct: 230 ERRFKVNL----VLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPK 285
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+L++F M+ SP+++ L S++SAC SL + G +H Y G++ D+ +GTA+V
Sbjct: 286 QSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIV 345
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG +E A K+F M ++N +W ++ GLA +G + A++LF MI +G+KP+ I
Sbjct: 346 DMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEI 405
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F AIL+AC H GLVDEG+ YFD M+++YN+ P +EHYGCM+D+ RAGL+EEA + R
Sbjct: 406 TFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELART 465
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP +P+ +I L AC G + L + +L+L+ + +VL +++S+++ W
Sbjct: 466 MPMKPDVLIWGLLLNACTTVGNI-ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSN 524
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
L + +G+ K PG S ++V DG A E
Sbjct: 525 VTRLRRLMKDRGVRKAPGSSVIEV-DGKAHEF 555
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 178/321 (55%), Gaps = 6/321 (1%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F +N+LI Y ++ ++ M++ G PD FT+P ++KAC G VH +
Sbjct: 71 FPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGV 130
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K+GL +D Y+ N+L+R Y AC + A VF+EM VRDVVSW+S+I+GF+ +A
Sbjct: 131 VVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEA 190
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ VF RM + P+ TLVS+++AC ++ G+ IH + ++++ LG A+++M
Sbjct: 191 ISVFFRMDV---EPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDM 246
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y K G +A +F+ + +++ SWTIMI+GL + ++ LF+ M G+ PD+I
Sbjct: 247 YVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIIL 306
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LSAC+ LG +D G + E IK + +VDM + G IE A I +M
Sbjct: 307 TSVLSACASLGTLDFG-TWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSM- 364
Query: 367 TEPNAVILRSFLGACRNHGQV 387
++ N + L HG V
Sbjct: 365 SQRNTFTWNALLCGLAMHGLV 385
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 44/272 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+++F+ LP T + ++ +I ++ +S++LF M G+ PD V+ AC
Sbjct: 257 KNIFDELP-TRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACAS 315
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH I + G+ D +IG ++ MYA C I++A +F M R+ +W+++
Sbjct: 316 LGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNAL 375
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ G +AL +F M ++ PN +T +++++AC
Sbjct: 376 LCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACC-------------------- 415
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMRE-----KNLQSWTIMISGLADNGRGNYAI 288
CG V++ K F+ M + L+ + MI G A+
Sbjct: 416 ---------------HCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAV 460
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
L M +KPD + + +L+AC+ +G ++
Sbjct: 461 ELARTM---PMKPDVLIWGLLLNACTTVGNIE 489
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 36/205 (17%)
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ----SWT 272
N+R IH+ V +GL D + + ++E ++ VE + + + N + +
Sbjct: 17 NLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFAN--FVEYGDYACDYLEQGNTRLGSFPFN 74
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+I+G A+S++ +M++ G PD +F +L ACS+ EG+ + ++
Sbjct: 75 SLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKL 134
Query: 333 ------YNIKPTMEHYGCMVD----------MLGR--------------AGLIEEAYHII 362
Y + YG D ML R AG +EA +
Sbjct: 135 GLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVF 194
Query: 363 RNMPTEPNAVILRSFLGACRNHGQV 387
M EP+ L S L AC +G +
Sbjct: 195 FRMDVEPSMTTLVSVLAACARNGDL 219
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 247/436 (56%), Gaps = 36/436 (8%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK--TGLRPDNFTYPF 106
+L+ + +F LP P +F++N +I+A+ ++ F+ L + P+ + Y
Sbjct: 60 NLYHAQLIFAQLP-NPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTS 118
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
++KAC I G VH+++ K GLD++ ++G +L+ MY +E A VF+EMP+RD
Sbjct: 119 LIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRD 178
Query: 167 VVSWSSMIAGFVACDS-------------------------------PSDALKVFHRM-K 194
VVSW++M++G+ C SDA++VFH M K
Sbjct: 179 VVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQK 238
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ P+ VTLVS++SAC + + G I + G L++ LG AL++MY+KCG +E
Sbjct: 239 VGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTME 298
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+A ++F+ MRE+++ SW+ MI G +G + A ++KM++ G+KP+ ++F +LSACS
Sbjct: 299 EARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACS 358
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLVD+G F M + Y I P + HYGC++D+L RAG ++EA +I +MP EPN ++
Sbjct: 359 HAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVW 418
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
+ LG CR H + + + + LL+L+ E +YV A + G D AA + +
Sbjct: 419 GALLGGCRIH-KDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQH 477
Query: 435 KGLNKVPGCSWVKVND 450
KG+ K PGCS ++V++
Sbjct: 478 KGIIKDPGCSKIEVHN 493
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 210/311 (67%), Gaps = 1/311 (0%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT++ YA E+ +A+ +F+ RD SWSSMI+ + +AL+++ M A+
Sbjct: 58 NTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASII 117
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +TLVS+VSAC+ L + G +H + N +ELD+ LGTAL++MY+KCG +E A +V
Sbjct: 118 PDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRV 177
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M EK++Q+W+ MI GLA++G G+ ++SLF+KMI G+KP+ ++F +L AC+H+GLV
Sbjct: 178 FDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLV 237
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EGK YF M V+ I+PT+EHYGCMVD+LGR+G +EEA +IR+M EP+ +I R+ LG
Sbjct: 238 SEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLG 297
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H V ++ + KL + L+P +YVL +++ + + +W+ AE+ I + + +
Sbjct: 298 ACRIHKNVEIAEEAMAKLRV-LDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQR 356
Query: 440 VPGCSWVKVND 450
+PG S ++ ++
Sbjct: 357 IPGRSSIEWDE 367
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F+++++I AYAK+ S E+++L+ EM + PD T VV AC + +G VH
Sbjct: 86 FSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRF 145
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ ++ D +G L+ MYA C +I+ A+ VF+ MP +DV +WSSMI G ++
Sbjct: 146 VESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHES 205
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALVE 245
L +F +M PN VT V ++ ACT + V G+ S V+G+E V +V+
Sbjct: 206 LSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVD 265
Query: 246 MYSKCGHVEKAFKVFNLM 263
+ + GHVE+A ++ M
Sbjct: 266 LLGRSGHVEEARQLIRSM 283
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 45/243 (18%)
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MYA +D+A+ F+E P+RDV + M+A +V+ ++A KVF M + +
Sbjct: 1 MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRD------- 53
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVS T IH YA+ G V A ++F+
Sbjct: 54 ---LVSWNTM---------IHGYAMR--------------------GEVGLAREIFDGTE 81
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK- 323
+++ SW+ MIS A + R A+ L+ +M + PD I+ +++SACS LG + G
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 324 -NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+ F E R I+ ++ ++DM + G IE A + MP E + S +
Sbjct: 142 VHRFVESNR---IELDLKLGTALIDMYAKCGDIESAQRVFDRMP-EKDVQTWSSMIIGLA 197
Query: 383 NHG 385
NHG
Sbjct: 198 NHG 200
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 239/431 (55%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+ +K ++ + + + + S L R FN LP L A+N +I Y++
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISGYSQY 438
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+E++ LF EM K G+ + T ++K+ ++ + VH L K G SD Y+
Sbjct: 439 WEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV 498
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ Y C ++ A+ +FEE + D+VS++SMI + +ALK+F M+
Sbjct: 499 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 558
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ SL++AC +L G+ +H + + G LD+ G +LV MY+KCG ++ A +
Sbjct: 559 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 618
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ + E+ + SW+ MI GLA +G G A+ LF +M++ G+ P+ I+ ++L AC+H GLV
Sbjct: 619 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 678
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
E K YF+ M ++ KP EHY CM+D+LGRAG I EA ++ MP E NA + + LG
Sbjct: 679 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 738
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
A R H V L ++L LEPE +VL A++ + +G W+ AE+ + + K
Sbjct: 739 AARIHKDV-ELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 797
Query: 440 VPGCSWVKVND 450
PG SW++V D
Sbjct: 798 EPGMSWIEVKD 808
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 187/358 (52%), Gaps = 7/358 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H K+ L + I + I L S + + R L + P L +++ LI YA+
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDE-SSEPDLVSWSALISGYAQN 135
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ F EM G++ + FT+ V+KAC + IG VH ++ G + D ++
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NTL+ MYA C E +K +F+E+P R+VVSW+++ + +V D +A+ +F+ M L+
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN +L S+V+ACT L + G+ IH Y + G + D ALV+MY+K G + A V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +++ ++ SW +I+G + A+ L +M ++G+ P+ + S+ L AC+ +GL
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVI 373
+ G+ + ++ G +VDM + L+E+A +P + NA+I
Sbjct: 376 ELGRQLHSSLMKMDMESDLFVSVG-LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAII 432
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 34/364 (9%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
++ LF+ +P + ++N L Y + E++ LF EM+ +G++P+ F+ +V AC
Sbjct: 211 SKRLFDEIP-ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G +H + K+G D D + N L+ MYA ++ A +VFE++ D+VSW++
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNA 329
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IAG V + AL++ +MK + PN TL S + AC + G +HS +
Sbjct: 330 VIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E D+ + LV+MYSKC +E A FNL+ EK+L +W +ISG + A+SLF
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFV 449
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR------VYNIKPTMEHYG--- 343
+M + G+ + + S IL + + L +V + + +Y + ++ YG
Sbjct: 450 EMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 509
Query: 344 ---------------------CMVDMLGRAGLIEEAYHI---IRNMPTEPNAVILRSFLG 379
M+ + G EEA + +++M +P+ + S L
Sbjct: 510 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLN 569
Query: 380 ACRN 383
AC N
Sbjct: 570 ACAN 573
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 34/366 (9%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F + P + ++N +I ++++L +M ++G+ P+ FT +KAC
Sbjct: 314 SVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGM 372
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L +G +HS + K+ ++SD ++ L+ MY+ C ++ A+ F +P +D+++W+++I
Sbjct: 373 GLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAII 432
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G+ +AL +F M N TL +++ + L V +H +V +G
Sbjct: 433 SGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH 492
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ + +L++ Y KC HVE A ++F +L S+T MI+ A G+G A+ LF +M
Sbjct: 493 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM 552
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNY----------------------------F 326
LKPD S++L+AC++L ++GK
Sbjct: 553 QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 612
Query: 327 DEMARVYN--IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGAC 381
D+ R ++ + + + M+ L + G +A + M E PN + L S LGAC
Sbjct: 613 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672
Query: 382 RNHGQV 387
+ G V
Sbjct: 673 NHAGLV 678
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 11/336 (3%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+LP P LI+ + S ++ + + + K P + +Y ++ C +
Sbjct: 18 HLPFKPA----PKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLR 73
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H+ I K GL D I N L+ +Y+ C+ A+ + +E D+VSWS++I+G+
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYA 133
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
AL FH M L N T S++ AC+ + ++R G+ +H VV+G E DV
Sbjct: 134 QNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVF 193
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ LV MY+KC + ++F+ + E+N+ SW + S A+ LF +M+ +G
Sbjct: 194 VANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSG 253
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEE 357
+KP+ S S++++AC+ L GK + ++ Y+ P + +VDM + G + +
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLAD 311
Query: 358 AYHIIRNMPTEPNAVILRSFLGAC---RNHGQVLYL 390
A + + +P+ V + + C +H Q L L
Sbjct: 312 AISVFEKI-KQPDIVSWNAVIAGCVLHEHHEQALEL 346
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 245/435 (56%), Gaps = 35/435 (8%)
Query: 54 RSLFNNLP-VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +FN + + +++ ++ Y + E++ LF EM +G+ D + AC
Sbjct: 222 RRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACS 281
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE----------- 161
R L + +G VH L KVG++ + N L+ +Y++C EI A+ +F++
Sbjct: 282 RVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWN 341
Query: 162 ---------------------MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
MP +DVVSWS+MI+G+ + S+AL +F M+L P
Sbjct: 342 SMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRP 401
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ LVS +SACT L + G+ IH+Y N L+++V L T L++MY KCG VE A +VF
Sbjct: 402 DETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVF 461
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M EK + +W +I GLA NG ++++FA M +TG P+ I+F +L AC H+GLV+
Sbjct: 462 YAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVN 521
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G++YF+ M + I+ ++HYGCMVD+LGRAGL++EA +I +MP P+ + LGA
Sbjct: 522 DGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGA 581
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR H + + + LG+ L++L+P+ +VL +++ + GNW E+ + Q G+ K
Sbjct: 582 CRKH-RDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKT 640
Query: 441 PGCSWVKVNDGSAEE 455
PGCS ++ N G+ E
Sbjct: 641 PGCSMIEAN-GTVHE 654
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 47/325 (14%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISL---HFTRSLFNNLP 61
+++L+Q K H QL + + T L + SR I +S S +L H++ +FN+L
Sbjct: 6 LDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLR 65
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKL-FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P F +NT++RA+ S L + L + +PD++TYP +++ C + G
Sbjct: 66 -NPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEG 124
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+H+ G D D Y+ NTL+ +YA C + A+ VFEE PV D+VSW++++AG+V
Sbjct: 125 RQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQA 184
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+A +VF M P T+ S
Sbjct: 185 GEVEEAERVFEGM------PERNTIAS--------------------------------- 205
Query: 241 TALVEMYSKCGHVEKAFKVFNLM--REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+++ ++ + G VEKA ++FN + RE+++ SW+ M+S N G A+ LF +M +G
Sbjct: 206 NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSG 265
Query: 299 LKPDSISFSAILSACSHLGLVDEGK 323
+ D + + LSACS + V+ G+
Sbjct: 266 VAVDEVVVVSALSACSRVLNVEMGR 290
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 13/269 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ LF ++P + +++ +I YA+ C E++ LF EM G+RPD +
Sbjct: 352 SIQDAEMLFYSMP-EKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAI 410
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + +G +H+ I + L + + TL+ MY C ++ A VF M + V
Sbjct: 411 SACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVS 470
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES----- 223
+W+++I G S +L +F MK PN +T + ++ AC + V G
Sbjct: 471 TWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSM 530
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNG 282
IH + + E ++ +V++ + G +++A ++ + M ++ +W ++ +
Sbjct: 531 IHEHKI----EANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHR 586
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILS 311
L K+IQ L+PD F +LS
Sbjct: 587 DNEMGERLGRKLIQ--LQPDHDGFHVLLS 613
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 268/468 (57%), Gaps = 18/468 (3%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
+Q ++ L Q+H L T L T +S + TS + + ++FN++P P LF Y
Sbjct: 12 LQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTIFNHIP-NPTLFLY 70
Query: 70 NTLIRAYAKTSCSIE-SIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
NTLI + S I + L++ +L L+P++FT+P + KAC + G +H+ +
Sbjct: 71 NTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHV 130
Query: 128 FK-VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG---------- 176
K + D ++ N+LL YA ++ V++ +F+++ D+ +W++M+A
Sbjct: 131 LKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSY 190
Query: 177 ---FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
F D +AL +F M+L+ PN VTLV+L+SAC++L + G H Y + N L
Sbjct: 191 STSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNL 250
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L+ +GTALV+MYSKCG + A ++F+ + +++ + MI G A +G GN A+ L+
Sbjct: 251 KLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRN 310
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M L PD + + ACSH GLV+EG F+ M V+ ++P +EHYGC++D+LGRAG
Sbjct: 311 MKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAG 370
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
++EA +++MP +PNA++ RS LGA + HG L + + K L++LEPE NYVL +
Sbjct: 371 RLKEAEERLQDMPMKPNAILWRSLLGAAKLHGN-LEMGEAALKHLIELEPETSGNYVLLS 429
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
++ + G W+ + + + G++K+PG S V++N E ++ + A
Sbjct: 430 NMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKA 477
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 260/463 (56%), Gaps = 43/463 (9%)
Query: 30 SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
S+D N + ++S +L + +FN+ P +FAYN L++A+++ + +I F
Sbjct: 54 SIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYF 113
Query: 90 DE--MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA 147
+ +L PD +T+ V+KAC + G VH + K G +S+ ++ N+L+ +Y
Sbjct: 114 NNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYF 173
Query: 148 ACKEIDVAKAVFEEMPVRDVVSW-------------------------------SSMIAG 176
+A+ +F+EM VRDVVSW S+MI+G
Sbjct: 174 KVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISG 233
Query: 177 FVACDSPSDALKVFHRMK-LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ + +DA+++F +M+ +PN VTLVS++SAC L + G+ IH + N +E+
Sbjct: 234 YARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEV 293
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ LG AL +MY+KCG V +A VF+ M E+++ SW+I+I GLA G N A + FA+MI
Sbjct: 294 GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMI 353
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ GL+P+ ISF +L+AC+H GLVD+G YFD M +VY I P +EHYGC+VD+L RAG +
Sbjct: 354 EDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRL 413
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY----VL 411
++A +I +MP +PN ++ + LG CR +Y D G+ ++ EL +N+ V
Sbjct: 414 DQAESLINSMPMQPNVIVWGALLGGCR-----IYKDAERGERVVWRILELDSNHSGSLVY 468
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
A+V + G D AA + + K PGCSW+++N+ E
Sbjct: 469 LANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYE 511
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 235/415 (56%), Gaps = 32/415 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++N+LI Y + E++ ++ +M+ ++PD T VV AC + + +G +H
Sbjct: 220 LVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHR 279
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF-------- 177
I + GL+ + N L+ MY C +++ K +F+ M + VVSW++MI G+
Sbjct: 280 YIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDM 339
Query: 178 -----------------------VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
V + +AL++F M+ +N P+ VT++ +SAC+
Sbjct: 340 AGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQ 399
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G H+Y + L LDVALGTAL++MY+KCG++ KA +VFN M +N +WT +
Sbjct: 400 LGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAI 459
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I GLA G N AI F+KMI +GL PD I+F +L+AC H GLV+EG+ YFD+M +N
Sbjct: 460 IGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFN 519
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
+ P +HY CMV++LGRAGL+EEA +I+ MP E +A++ + AC H +L + +
Sbjct: 520 LSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLL-IGERA 578
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LL L+P YVL A++ +G W+ A + + ++G+ K PG S ++VN
Sbjct: 579 ASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVN 633
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 213/422 (50%), Gaps = 38/422 (9%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLF 57
++S + +L++ K+ L Q+ + T L + SR F S S +L + +
Sbjct: 51 VLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKIL 110
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLL 116
NNL P +F++N +IR ++ + + L+ ML + G RPDN+TY F+ K C +L
Sbjct: 111 NNLQ-NPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVL 169
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+G + + K+G D D Y+ N ++ M + E +A VF+E VRD+VSW+S+I G
Sbjct: 170 SYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLING 229
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+V P +A+ ++ +M + P+ VT++ +VSAC L +++ G IH Y +GL L
Sbjct: 230 YVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLK 289
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG-------------- 282
++L AL++MY KCG +E +F+ MR+K + SWT MI G A NG
Sbjct: 290 ISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPE 349
Query: 283 --------------RGNY---AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+ N A+ LF +M + +KPD ++ LSACS LG +D G +
Sbjct: 350 KNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGM-W 408
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ +N+ + ++DM + G + +A + MP N++ + +G +G
Sbjct: 409 THNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRR-NSLTWTAIIGGLALYG 467
Query: 386 QV 387
V
Sbjct: 468 NV 469
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 253/447 (56%), Gaps = 8/447 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLF 67
L+ L KT ++ + H + + + I +R I S L R +F+NL P +F
Sbjct: 26 LLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLIDKYSHFSNLDHARKVFDNLS-EPDVF 84
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
N +I+ YA E++K++D M G+ P+ +TYPFV+KACG G +H
Sbjct: 85 CCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHGHA 144
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G+D D ++GN L+ YA C++++V++ VF+E+P RD+VSW+SMI+G+ DA+
Sbjct: 145 VKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMISGYTVNGYVDDAI 204
Query: 188 KVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+F+ M L +ES P+ T V+++ A ++ AG IH Y V + LD A+GT L+
Sbjct: 205 LLFYDM-LRDESVGGPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTGLI 263
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+YS CG+V A +F+ + ++++ W+ +I +G A++LF +++ GL+PD +
Sbjct: 264 SLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGV 323
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
F +LSACSH GL+++G + F+ M Y + + HY C+VD+LGRAG +E+A I++
Sbjct: 324 VFLCLLSACSHAGLLEQGWHLFNAM-ETYGVAKSEAHYACIVDLLGRAGDLEKAVEFIQS 382
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP +P I + LGACR H + + L + + L L+P+ YV+ A + + W
Sbjct: 383 MPIQPGKNIYGALLGACRIH-KNMELAELAAEKLFVLDPDNAGRYVILAQMYEDAERWQD 441
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDG 451
AA + + K + K G S V++ G
Sbjct: 442 AARVRKVVKDKEIKKPIGYSSVELESG 468
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 261/452 (57%), Gaps = 4/452 (0%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLP 61
S E ++ + L Q H + T + ++++ + L+ + S+ +TR LF ++
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P F +N+LI+A + S++++ + ML + + P +T+ V+KAC L+ +G
Sbjct: 70 -DPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGT 128
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VHS +F G S+ ++ L+ YA VA+ VF+EMP R +++W+SMI+G+
Sbjct: 129 IVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNG 188
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
S+A++VF++M+ + P+S T VS++SAC+ L ++ G +H V G+ ++V L T
Sbjct: 189 LASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLAT 248
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV M+S+CG V +A VF+ M E N+ SWT MISG +G G A+ +F +M G+ P
Sbjct: 249 SLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVP 308
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +++ A+LSAC+H GL++EG+ F M + Y + P +EH+ CMVDM GR GL+ EAY
Sbjct: 309 NRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQF 368
Query: 362 IRNMPTEP-NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+R + +E + + LGAC+ H + L + + L+ EPE +YVL +++ +L+G
Sbjct: 369 VRGLSSEELVPAVWTAMLGACKMH-KNFDLGVEVAENLISAEPENPGHYVLLSNMYALAG 427
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
D + + Q+GL K G S + V + S
Sbjct: 428 RMDRVESVRNVMIQRGLKKQVGYSTIDVENRS 459
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 239/431 (55%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+ +K ++ + + + + S L R FN LP L A+N +I Y++
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISGYSQY 411
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+E++ LF EM K G+ + T ++K+ ++ + VH L K G SD Y+
Sbjct: 412 WEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV 471
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ Y C ++ A+ +FEE + D+VS++SMI + +ALK+F M+
Sbjct: 472 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ SL++AC +L G+ +H + + G LD+ G +LV MY+KCG ++ A +
Sbjct: 532 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 591
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ + E+ + SW+ MI GLA +G G A+ LF +M++ G+ P+ I+ ++L AC+H GLV
Sbjct: 592 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 651
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
E K YF+ M ++ KP EHY CM+D+LGRAG I EA ++ MP E NA + + LG
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
A R H V L ++L LEPE +VL A++ + +G W+ AE+ + + K
Sbjct: 712 AARIHKDV-ELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 770
Query: 440 VPGCSWVKVND 450
PG SW++V D
Sbjct: 771 EPGMSWIEVKD 781
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 2/275 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H K+ L + I + I L S + R L + P L +++ LI YA+
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDE-SSEPDLVSWSALISGYAQN 135
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ F EM G++ + FT+ V+KAC + IG VH ++ G + D ++
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NTL+ MYA C E +K +F+E+P R+VVSW+++ + +V D +A+ +F+ M L+
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN +L S+V+ACT L + G+ IH Y + G + D ALV+MY+K G + A V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
F +++ ++ SW +I+G + A+ L +M
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 14/351 (3%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+LP P LI+ + S ++ + + + K P + +Y ++ C +
Sbjct: 18 HLPFKPA----PKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLR 73
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H+ I K GL D I N L+ +Y+ C+ A+ + +E D+VSWS++I+G+
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYA 133
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
AL FH M L N T S++ AC+ + ++R G+ +H VV+G E DV
Sbjct: 134 QNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVF 193
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ LV MY+KC + ++F+ + E+N+ SW + S A+ LF +M+ +G
Sbjct: 194 VANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSG 253
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEE 357
+KP+ S S++++AC+ L GK + ++ Y+ P + +VDM + G + +
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLAD 311
Query: 358 AYHIIRNMPTEPNAVILRSFLGAC---RNHGQVLYLDDNLGKLLLKLEPEL 405
A + + +P+ V + + C +H Q L L LG++ +L L
Sbjct: 312 AISVFEKI-KQPDIVSWNAVIAGCVLHEHHEQALEL---LGQMKRQLHSSL 358
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 267/486 (54%), Gaps = 43/486 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLF--NN 59
S+H E L+ + HL Q L LD + +++RFI TS S+ L + S+F N+
Sbjct: 30 SQHAEQLLCHCTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNH 89
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P +F YN +I A + +S +I LF+ + G+ PD++++PFV+KA + +
Sbjct: 90 ---RPSIFFYNNVIWALS-SSNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHV 145
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA---------------------- 157
G +H GLDS + +L++MY++C + A+
Sbjct: 146 GKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAK 205
Query: 158 ---------VFEEMPV--RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
+FE MP RDVVSW+++I+G+ SP++A+ +F M L N P+ + ++
Sbjct: 206 VGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAIL 265
Query: 207 SLVSACTSLINVRAGESIHSYAVV--NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+++SAC L ++ GE IH+Y N L V L +L++MY+K G + KA ++F M+
Sbjct: 266 AVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMK 325
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
K + +WT +ISGLA +G G A+ +F+ M + +KP+ ++ A+LSACSH+GLV+ G+N
Sbjct: 326 HKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRN 385
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
F M Y I+P +EHYGCM+D+LGRAG ++EA ++R MP+E NA + S L A +
Sbjct: 386 IFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRY 445
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G + L L + LEP NY L ++ + G W AA + + KVPG S
Sbjct: 446 GDAALAAEALRHLSV-LEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVS 504
Query: 445 WVKVND 450
+V++N+
Sbjct: 505 FVELNN 510
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 248/447 (55%), Gaps = 22/447 (4%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFN----------NLPVT 63
H L +H ++ + N + + F + SLS + + ++F +
Sbjct: 33 HKLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHN 92
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P +F +NT+ R YA++ +++ + +M+ + + PD TYPF++KA + L + G ++
Sbjct: 93 PNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAI 152
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS+ + G +S ++ N+LL +YAAC + + A VFE M RD+V+ S+I GF P
Sbjct: 153 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRP 212
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
S+AL +F M P+ T+VSL+SA L + G +H Y + GL + + +L
Sbjct: 213 SEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSL 272
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+++Y+KC + + E+N SWT +I GLA NG G A+ LF +M GL P
Sbjct: 273 LDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSE 324
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
I+F +L ACSH G++DEG +YF M + I P +EHYGCMVD+L RAGL+++AY I+
Sbjct: 325 ITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQ 384
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
NMP +PNAV R+ LGAC HG L L + LLKLEP+ +YVL +++ + W
Sbjct: 385 NMPVQPNAVTWRTLLGACTIHGH-LGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWA 443
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
+ ++ + G+ K G S V++ +
Sbjct: 444 DVQLIRRSMLKDGVKKTSGYSLVELGN 470
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 237/425 (55%), Gaps = 33/425 (7%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ + + + ++ LI + + E+I+ F M K G+ D + AC L
Sbjct: 197 LFDEM-LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 255
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI----------------------- 152
++ +G +HSL K+G +S + N L+ MY+ C +I
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 153 --------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
D AKA+F+ MP +DVVSWSSMI+G+ D + L +F M+++ P+ T
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVS++SAC L + G+ +H+Y NGL ++V LGT L++MY KCG VE A +VF M
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 435
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
EK + +W +I GLA NG ++ +F+ M + + P+ I+F +L AC H+GLVDEG++
Sbjct: 436 EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH 495
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+F M + I+P ++HYGCMVD+LGRAG ++EA ++ MP P+ + LGAC+ H
Sbjct: 496 HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKH 555
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G + +G+ L++L+P+ +VL +++ + G WD E+ + + + K+PGCS
Sbjct: 556 GDS-EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 614
Query: 445 WVKVN 449
++ N
Sbjct: 615 MIEAN 619
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 198/466 (42%), Gaps = 127/466 (27%)
Query: 48 ISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFV 107
I + +TR +FN + T F +N +IRAY +T+ + L+ ML L DN+TYP +
Sbjct: 26 IHIDYTRRIFNFIENTN-CFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLL 84
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA-------ACK---------- 150
++AC VH+ + K+G DSD Y+ NTL+ ++ AC+
Sbjct: 85 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 144
Query: 151 --------------EIDVAKAVFEEMPVR------------------------------- 165
++ AK ++ +MP R
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEK 204
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D+V+WS++IA F + +A++ F M + V VS +SAC +L+ V G+ IH
Sbjct: 205 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIH 264
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGH-------------------------------VE 254
S ++ G E + L AL+ MYSKCG V+
Sbjct: 265 SLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVD 324
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +F+ M EK++ SW+ MISG A N + ++LF +M +G KPD + +++SAC+
Sbjct: 325 NAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACA 384
Query: 315 HLGLVDEGK-------------------NYFDEMARVYNIKPTMEHYGCMVD-------- 347
L +++GK D + ++ +E + M++
Sbjct: 385 RLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNA 444
Query: 348 -MLGRA--GLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQV 387
+LG A GL+E + + NM PN + LGACR+ G V
Sbjct: 445 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 490
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 170/358 (47%), Gaps = 39/358 (10%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+++F+++P + +++++I YA+ E++ LF EM +G +PD T V+ AC R
Sbjct: 327 KAIFDSMP-EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 385
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH+ I + GL + +G TL+ MY C ++ A VF M + + +W+++
Sbjct: 386 LAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNAL 445
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG- 232
I G +L +F MK + +PN +T + ++ AC + V G+ H Y++++
Sbjct: 446 ILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH-HFYSMIHDH 504
Query: 233 -LELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISL 290
++ +V +V++ + G +++A ++ N M ++ +W ++ +G +
Sbjct: 505 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 564
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
K+I+ L+PD F +LS +Y K + D+L
Sbjct: 565 GRKLIE--LQPDHDGFHVLLS-------------------NIYASKGKWD------DVLE 597
Query: 351 RAGLIEEAYHIIRNMP----TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
G++ + H + +P E N VI FL + H + ++D L ++ +KL+ E
Sbjct: 598 IRGMMTK--HRVLKIPGCSMIEANGVI-HEFLAGDKTHPDMDAIEDMLVEMAMKLKLE 652
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 232/415 (55%), Gaps = 32/415 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ LI + + E+I+ F M K G+ D + AC L++ +G +HS
Sbjct: 341 MVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 400
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEI-------------------------------DV 154
L K+G +S + N L+ MY+ C +I D
Sbjct: 401 LSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDN 460
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
AKA+F+ MP +DVVSWSSMI+G+ D + L +F M+++ P+ TLVS++SAC
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 520
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ +H+Y NGL ++V LGT L++MY KCG VE A +VF M EK + +W +
Sbjct: 521 LAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNAL 580
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I GLA NG ++ +F+ M + + P+ I+F +L AC H+GLVDEG+++F M +
Sbjct: 581 ILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHK 640
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I+P ++HYGCMVD+LGRAG ++EA ++ MP P+ + LGAC+ HG + +
Sbjct: 641 IQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS-EMGRRV 699
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G+ L++L+P+ +VL +++ + G WD E+ + + + K+PGCS ++ N
Sbjct: 700 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEAN 754
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 183/440 (41%), Gaps = 126/440 (28%)
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
RAY +T+ + L+ ML L DN+TYP +++AC VH+ + K+G D
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 134 SDKYIGNTLLRMYA-------ACK------------------------EIDVAKAVFEEM 162
SD Y+ NTL+ ++ AC+ ++ AK ++ +M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 163 PVR-------------------------------DVVSWSSMIAGFVACDSPSDALKVFH 191
P R D+V+WS++IA F + +A++ F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M + V VS +SAC +L+ V G+ IHS ++ G E + L AL+ MYSKCG
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 252 H-------------------------------VEKAFKVFNLMREKNLQSWTIMISGLAD 280
V+ A +F+ M EK++ SW+ MISG A
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK----------------- 323
N + ++LF +M +G KPD + +++SAC+ L +++GK
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVIL 545
Query: 324 --NYFDEMARVYNIKPTMEHYGCMVD---------MLGRA--GLIEEAYHIIRNMP---T 367
D + ++ +E + M++ +LG A GL+E + + NM
Sbjct: 546 GTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHV 605
Query: 368 EPNAVILRSFLGACRNHGQV 387
PN + LGACR+ G V
Sbjct: 606 TPNEITFMGVLGACRHMGLV 625
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 170/358 (47%), Gaps = 39/358 (10%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+++F+++P + +++++I YA+ E++ LF EM +G +PD T V+ AC R
Sbjct: 462 KAIFDSMP-EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 520
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH+ I + GL + +G TL+ MY C ++ A VF M + + +W+++
Sbjct: 521 LAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNAL 580
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG- 232
I G +L +F MK + +PN +T + ++ AC + V G+ H Y++++
Sbjct: 581 ILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH-HFYSMIHDH 639
Query: 233 -LELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISL 290
++ +V +V++ + G +++A ++ N M ++ +W ++ +G +
Sbjct: 640 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
K+I+ L+PD F +LS +Y K G D+L
Sbjct: 700 GRKLIE--LQPDHDGFHVLLS-------------------NIYASK------GKWDDVLE 732
Query: 351 RAGLIEEAYHIIRNMP----TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
G++ + H + +P E N VI FL + H + ++D L ++ +KL+ E
Sbjct: 733 IRGMMTK--HRVLKIPGCSMIEANGVI-HEFLAGDKTHPDMDAIEDMLVEMAMKLKLE 787
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 260/469 (55%), Gaps = 39/469 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L Q H + T L+ + +++FI S + L + S+F + P P + +NT+IRA +
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQP-CPNTYLHNTMIRALS 89
Query: 78 ---KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+ + +I ++ ++ +PD FT+PFV+K R + G +H + G DS
Sbjct: 90 LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 149
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV--------------------------- 167
++ L++MY +C + A+ +F+EM V+DV
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 168 ------VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
VSW+ +I+G+ S+A++VF RM + N P+ VTL++++SAC L ++ G
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 269
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
E I SY G+ V+L A+++MY+K G++ KA VF + E+N+ +WT +I+GLA +
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 329
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G G A+++F +M++ G++P+ ++F AILSACSH+G VD GK F+ M Y I P +EH
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH 389
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCM+D+LGRAG + EA +I++MP + NA I S L A H L L + L+KL
Sbjct: 390 YGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD-LELGERALSELIKL 448
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
EP NY+L A++ S G WD + + + G+ K+ G S ++V +
Sbjct: 449 EPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 255/439 (58%), Gaps = 7/439 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
+ + Q+HTL +KT L + + + F+ + S+ +F+ +PV + ++ LI
Sbjct: 200 IAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRD-VVSWTGLIS 258
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y K +++ LF L+ + P+ T+ ++ ACG+ + +G +H L+ K
Sbjct: 259 GYMKAGLFNDAVALF---LRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGK 315
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ + NTL+ MY C+ + AK +F+E+P +D+VSW+SMI+G V P ++L +F+ M
Sbjct: 316 ELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEML 375
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ P+ V L S++SAC SL + G +H Y + ++ DV +GT+L++MY+KCG +E
Sbjct: 376 GSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIE 435
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A ++FNL+ KN+++W I GLA NG G A+ F ++++G +P+ I+F A+ SAC
Sbjct: 436 MAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACC 495
Query: 315 HLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
H GLVDEG++YF +M + YN+ P +EHYGCMVD+L RA L+EEA +I MP P+ I
Sbjct: 496 HSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQI 555
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
+ + L A +G V L + K + E + YVL ++ + + W + +
Sbjct: 556 IGALLSASSTYGNV-ELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMK 614
Query: 434 QKGLNKVPGCSWVKVNDGS 452
+KG++K PG S ++V+ S
Sbjct: 615 EKGISKAPGSSLIRVDGKS 633
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 201/393 (51%), Gaps = 31/393 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI------LTSLSISLHFTRSL---FNN 59
IQ + Q+H L+++L N ++++ +T + +F + F++
Sbjct: 90 FIQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDWSFSS 149
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P N +I Y + +I+++ ++ G PD +T P V+K+C R I
Sbjct: 150 FPC-------NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAE 202
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+H+L K L D ++ N+ + +Y+ C + A VF+ MPVRDVVSW+ +I+G++
Sbjct: 203 VKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMK 262
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+DA+ +F RM +A PN+ T VS++ AC L + G+ IH ++ +
Sbjct: 263 AGLFNDAVALFLRMDVA---PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVV 319
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
L++MY KC V A ++F+ + EK++ SWT MISGL ++ LF +M+ +G
Sbjct: 320 SNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGF 379
Query: 300 KPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLI 355
+PD + +++LSAC+ LGL+D G+ Y D +++ H G ++DM + G I
Sbjct: 380 EPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDV-----HIGTSLIDMYAKCGCI 434
Query: 356 EEAYHIIRNMPTEPNAVILRSFLG--ACRNHGQ 386
E A + +P++ N +++G A HGQ
Sbjct: 435 EMAQQMFNLLPSK-NIRTWNAYIGGLAINGHGQ 466
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 231/383 (60%), Gaps = 2/383 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ ++I AY + ++I LFDEM G+RPD +T +V AC + G VHS
Sbjct: 362 IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 421
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G+ S+ + N L+ MYA C ++ A+ VF ++PV+D+VSW++MI G+ P++
Sbjct: 422 YVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNE 481
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F M+ P+ +T+ ++ AC L + G IH + + G D+ + ALV+
Sbjct: 482 ALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVD 540
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A +F+++ +K+L SWT+MI+G +G GN AIS F +M G++PD S
Sbjct: 541 MYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 600
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
FSAIL+ACSH GL++EG +F+ M ++P +EHY C+VD+L R G + +AY I +M
Sbjct: 601 FSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESM 660
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P+ I L CR H V L + + + + +LEP+ YV+ A+V + + W+
Sbjct: 661 PIKPDTTIWGVLLSGCRIHHDV-KLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEV 719
Query: 426 AELMVAINQKGLNKVPGCSWVKV 448
+L + ++G + PGCSW++V
Sbjct: 720 KKLRKRMQKRGFKQNPGCSWIEV 742
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 175/355 (49%), Gaps = 6/355 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIR 74
V ++H LK NT +++ I + +LF+ L P + ++N++I
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMIN 269
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
S +++F +ML G+ D T V+ AC + +G ++H K
Sbjct: 270 GCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSE 329
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ NTLL MY+ C ++ A VF +M +VSW+S+IA +V SDA+ +F M+
Sbjct: 330 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQ 389
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
P+ T+ S+V AC ++ G +HSY + NG+ ++ + AL+ MY+KCG VE
Sbjct: 390 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVE 449
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+A VF+ + K++ SW MI G + N N A+ LF M Q KPD I+ + +L AC+
Sbjct: 450 EARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACA 508
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMPTE 368
L +D+G+ + R H C +VDM + GL+ A + +P +
Sbjct: 509 GLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIPKK 561
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 112/221 (50%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
+Y V++ C + G VHS+I G+ D+ +G L+ MY C ++ + +F+++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
V W+ +++ + + +++ +F +M+ N T ++ +L V+ +
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H Y + G + A+ +L+ Y K G VE A +F+ + E ++ SW MI+G NG
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+ +F +M+ G++ D + ++L AC+++G + G+
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGR 316
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
S++ C ++ G+ +HS + NG+ +D ALG LV MY CG + + K+F+ +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK--- 323
+ W +++S A G ++SLF KM + G+ + +F+ +L + LG V E K
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 324 --------------------------------NYFDEMARVYNIKPTMEHYGCMVDMLGR 351
N FDE++ + GC+V+
Sbjct: 219 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
GL E + + + E + L S L AC N G +
Sbjct: 279 NGL--EIFIQMLILGVEVDLTTLVSVLVACANIGNL 312
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 257/445 (57%), Gaps = 24/445 (5%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
H LI S T+ LHQ+H +L N+ ++++ I +S S+ SL + S+F
Sbjct: 42 HFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD-H 100
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P LF +N LIR A+ S S+ F ML+ +RPD T PFV+K+ + +G+G +
Sbjct: 101 PNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCL 160
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H + K+GL+ D ++ +L+ MY E+ +F+E P R+
Sbjct: 161 HGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN----------------K 204
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++++ +++ ++ PN +T+VS + ACT + ++ GE IH+Y NG +L+ +GTAL
Sbjct: 205 AESILLWNGVR-----PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTAL 259
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY+KCG+++ A +VF + K+L +W++MI G A +G + A+ F KM G+ PD
Sbjct: 260 VDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDE 319
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ F AIL+ACSH G VD+G N+F+ M Y+I+PTM+HY +VD+LGRAG ++EA I+
Sbjct: 320 VIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQ 379
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP P+ VI + ACR H + + + + LL+LEP+ +YV ++V + G W+
Sbjct: 380 SMPINPDFVIWGALFCACRAHKNI-EMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWE 438
Query: 424 TAAELMVAINQKGLNKVPGCSWVKV 448
+ + +G+ K PG S+++V
Sbjct: 439 DVERVRTLMKNRGVEKDPGWSYIEV 463
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 236/383 (61%), Gaps = 11/383 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF L+ AYAK + + FDE R D F ++ A + G +
Sbjct: 75 LFVRTALVEAYAKAGRADLARAAFDE----APRRDVFLCNVMLAA-----YVTRGEVAEA 125
Query: 126 L-IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+F + D NT++ YA E+D+A+ VF M RD SWSSM++ +
Sbjct: 126 RRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSK 185
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
DAL+++ M+ A +P+ T+VS++SAC+ + + G +H + NG+ELDV LGTAL+
Sbjct: 186 DALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALI 245
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG +E + +VF+ M K++ +W+ MI GLA++G G+ A+SLF++M+ GL+P+ +
Sbjct: 246 DMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEV 305
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L +C+HLGLV +GK YF M+ V+ + P ++HYGCMVD+LGR+G IEEA +IR+
Sbjct: 306 TFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRD 365
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP EP+AVI R+ LGACR + V ++ + KL + L+P +YVL +++ + + +W+
Sbjct: 366 MPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRV-LDPHADGHYVLLSNIYAQANSWEG 424
Query: 425 AAELMVAINQKGLNKVPGCSWVK 447
AE+ + ++ + ++PG S ++
Sbjct: 425 VAEMRRTLRRERIQRIPGRSSIE 447
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 263/494 (53%), Gaps = 46/494 (9%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKT---SLDHNTCIISRFILT--------SLSISLHFTR 54
I LI+ KT+ LHQLH + S + ++++F+ T S + LH+ +
Sbjct: 19 IIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAK 78
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+FN++ P F YNT+IR + S I ++ F +M + + D+ ++PF +KAC +
Sbjct: 79 SIFNSIQ-NPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQL 137
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------- 148
+ +H + K G SD Y+ N+L+ Y
Sbjct: 138 GGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSYNVLI 197
Query: 149 ---CKEIDVAKA--VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
K DV KA +F+ MPVRD VSW+++IAG D +A+++F M P++V
Sbjct: 198 DGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPDNV 257
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
LVS +SAC L + G+ IH Y N +++D L T LV+ Y+KCG V+ A K+F+
Sbjct: 258 ALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALKIFDSS 317
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+KNL +W M+ GLA +G G + F++MI+ G+KPD IS +L CSH GLVDE +
Sbjct: 318 SDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLVDEAR 377
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
FDEM VY + +HYGCM D+LGRAGLI++ +I++MP + + LG CR
Sbjct: 378 KLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLLGGCRI 437
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI-NQKGLNKVPG 442
HG V + + K L++L+P+ G Y + A+V + + W+ + ++ + + + K+ G
Sbjct: 438 HGDV-EIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTKIAG 496
Query: 443 CSWVKVNDGSAEEM 456
S +++ DG A E
Sbjct: 497 FSLIQL-DGVAHEF 509
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 230/383 (60%), Gaps = 2/383 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++I Y K C E++ L+ +M + G PD T +V AC +G+G +HS I
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
++ + +G+ L+ MYA C ++ A+ VF+++ +DV +WS++I G+V + ++AL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 189 VFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F + +N PN VT+++++SAC L ++ G +H Y V+L +L++M+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG ++ A ++F+ M K+L SW M++GLA +G G A++ F M T L+PD I+F
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L+ACSH GLV EGK F E+ +Y ++ EHYGCMVD+L RAGL+ EA IR MP
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+ I S LGACR + L L + + LL+LEP Y+L +++ + W+ +
Sbjct: 448 QPDGAIWGSMLGACRVYNN-LELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ +N+KG+ K PGCS V +++
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDN 529
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 189/326 (57%), Gaps = 4/326 (1%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PD 100
+L+ S+ + + S+F + V L +N+++RA+ ++ +++ + EML+ PD
Sbjct: 20 VLSMGSLGVGYAYSVFAHTRVLDVL-TWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPD 78
Query: 101 NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
FT+P ++K C L +G +H + K L SD YI TLL MYAAC ++ A+ +FE
Sbjct: 79 RFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE 138
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
M R+ V W+SMI+G++ P++AL ++ +M+ SP+ VT+ +LVSAC L ++
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +HS+ +++ LG+ALV MY+KCG ++ A +VF+ + +K++ +W+ +I G
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK 258
Query: 281 NGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
N R A+ LF ++ + ++P+ ++ A++SAC+ LG ++ G+ D + R ++
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSV 317
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G I+ A I +M
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSM 343
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 241/409 (58%), Gaps = 11/409 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPF- 106
L R+LF+ +P+ + ++ ++I Y + + ++ LF + L+ D P
Sbjct: 2065 QLKDARALFDEIPLRN-VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123
Query: 107 ------VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
V+ AC R GI VH + K G D +GNTL+ YA C + V+K VF+
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 2183
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVR 219
M +D +SW+SMIA + +AL+VFH M + N+VTL +++ AC +R
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 2243
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
AG+ IH + LE +V +GT++++MY KCG VE A K F+ M+EKN++SWT M++G
Sbjct: 2244 AGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 2303
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+GR A+ +F KM++ G+KP+ I+F ++L+ACSH GLV+EG ++F+ M Y+I+P +
Sbjct: 2304 MHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 2363
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
EHYGCMVD+ GRAG + EAY++I+ M +P+ V+ S LGACR H V L + + L
Sbjct: 2364 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNV-DLGEIAAQKLF 2422
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+L+P+ YVL +++ + +G W + + + + L K PG S V++
Sbjct: 2423 ELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVEL 2471
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 212/395 (53%), Gaps = 33/395 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
L+Q K HL Q+H +++ L ++ + + I L S + + LF + P F
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPCTF 91
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +IRA S +++ L+ M+ G+ D FT+PFV+KAC L I +G VH +
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC------- 180
K G D ++ N L+ Y C A VFE+M VR+VVSW+++I+G ++C
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 181 ------------------------DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
P +AL++F RM+ N PN T+VSL+ ACT +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G IH YA+ N +E+ V LGTAL++MYSKCG ++ A +VF M K+L +W MI+
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
L +G G A++LF++M + +KPD+I+F +L AC H+ V EG YF M + Y I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
P EHY CM ++ R+ ++EA+ + + + N+
Sbjct: 392 PIPEHYECMTELYARSNNLDEAFKSTKEVGSLANS 426
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 179/332 (53%), Gaps = 19/332 (5%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A+ S+E+++ F + K GL P ++P +K+C + G H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
F G ++D ++ + L+ MY+ C ++ A+A+F+E+P+R+VVSW+SMI G+V + +AL
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 2101
Query: 188 KVFH-------RMKLANESP-NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+F ++ N P +SV +VS++SAC+ + E +H + V G + + +
Sbjct: 2102 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 2161
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TG 298
G L++ Y+KCG + KVF+ M EK+ SW MI+ A +G A+ +F M++ G
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGL 354
++ ++++ SA+L AC+H G + GK D++ IK +E+ C ++DM + G
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTSIIDMYCKCGR 2276
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+E A M E N + + HG+
Sbjct: 2277 VEMAKKTFDRM-KEKNVKSWTAMVAGYGMHGR 2307
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 62/296 (20%)
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
++A ++ + +V SW+S+IA +AL+ F ++ P + + +C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++L ++ +G H A V G E D+ + +AL++MYSKCG ++ A +F+ + +N+ SWT
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 273 IMISGLADNGRGNYAISLFAKMIQ--------TGLKPDSISFSAILSACS---------- 314
MI+G N + + A+ LF ++ + DS+ ++LSACS
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 315 -HLGLVDEG------------------------KNYFDEMARVYNIKPTMEHYGCMVDML 349
H +V +G K FD M +I + M+ +
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS-----WNSMIAVY 2200
Query: 350 GRAGLIEEAYHI----IRNMPTEPNAVILRSFLGACRN----------HGQVLYLD 391
++GL EA + +R++ NAV L + L AC + H QV+ +D
Sbjct: 2201 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 2256
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 237/402 (58%), Gaps = 3/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L +F +P + A+N++I Y SI I+LF M G++P T ++
Sbjct: 258 LEMAIEVFEQMP-KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIM 316
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C R + G VH + + SD +I ++L+ +Y C ++++A+ +F+ +P VVS
Sbjct: 317 VCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVS 376
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ MI+G+VA +AL +F M+ + P+++T S+++AC+ L + GE IH+ +
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLII 436
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
L+ + + AL++MY+KCG V++AF VF + +++L SWT MI+ +G+ A+
Sbjct: 437 EKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALE 496
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LFA+M+Q+ +KPD ++F AILSAC H GLVDEG YF++M VY I P +EHY C++D+L
Sbjct: 497 LFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLL 556
Query: 350 GRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAG + EAY I++ P + V +L + ACR H + L + + L+ +P+ +
Sbjct: 557 GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNI-DLGAEIARTLIDKDPDDSST 615
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L +++ + + WD + + + GL K PGCSW+++N
Sbjct: 616 YILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQ 657
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 191/360 (53%), Gaps = 11/360 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVTPPLFAYNT 71
SK++ +H + L ++ + I LS L+ + +F+N+ + +N
Sbjct: 16 SKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNG 75
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y K +E+++LF+++L L+PD++TYP V+KACG +G +H+ + K
Sbjct: 76 LMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKT 135
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL D +G++L+ MYA C + A +F EMP +DV W+++I+ + + +AL+ F
Sbjct: 136 GLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYF 195
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ PNSVT+ + +S+C L+++ G IH + +G LD + +ALV+MY KC
Sbjct: 196 GLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
GH+E A +VF M +K + +W MISG G I LF +M G+KP + S+++
Sbjct: 256 GHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLI 315
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMP 366
CS + EGK Y I+ ++ ++D+ + G +E A +I + +P
Sbjct: 316 MVCSRSARLLEGK-----FVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIP 370
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 200/368 (54%), Gaps = 8/368 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+HT +KT L + + S + + + + LFN +P + +NT+I Y ++
Sbjct: 128 IHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP-EKDVACWNTVISCYYQSG 186
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E+++ F M + G P++ T + +C R L + G +H + G D +I +
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C +++A VFE+MP + VV+W+SMI+G+ +++F RM P
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKP 306
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
TL SL+ C+ + G+ +H Y + N ++ DV + ++L+++Y KCG VE A +F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIF 366
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
L+ + + SW +MISG G+ A+ LF++M ++ ++PD+I+F+++L+ACS L ++
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426
Query: 321 EGKNYFDEM--ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
+G+ + + ++ N + M G ++DM + G ++EA+ + + +P + V S +
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVM---GALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMI 482
Query: 379 GACRNHGQ 386
A +HGQ
Sbjct: 483 TAYGSHGQ 490
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++AC + G +H + +GL +D ++ L+ +Y +C D AK VF+ M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 167 VVS-WSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+S W+ ++AG+ +AL++F + + P+S T S++ AC L G+ I
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H+ V GL +D+ +G++LV MY+KC EKA +FN M EK++ W +IS +G
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY-- 342
A+ F M + G +P+S++ + +S+C+ L ++ G +E+ N ++ +
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI---NSGFLLDSFIS 245
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTE 368
+VDM G+ G +E A + MP +
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKK 271
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ L+ L+ AC + +++ G+ IH V GL+ D+ L L+ +Y C + A VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 261 NLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACS---- 314
+ M + W +++G N A+ LF K++ LKPDS ++ ++L AC
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121
Query: 315 -------HLGLVDEGK-----------------NYFDEMARVYNIKPTME--HYGCMVDM 348
H LV G N F++ ++N P + + ++
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 349 LGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGAC 381
++G +EA + ++R EPN+V + + + +C
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSC 217
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 256/438 (58%), Gaps = 6/438 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPV-TPPLFAYNTLIRAYAK 78
QLH L +K L +T +++ I S S T RS+ ++ P ++NT+I Y
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIH 173
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ F +M K + D+ T + AC R ++ +G H+L+ G + + Y+
Sbjct: 174 AGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYM 233
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++L+ MYA C +++ A+ +F+ MP R+ V W+SMI+G+ +A+K+F M++A
Sbjct: 234 GSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGV 293
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+ ++VS+C + + G +H+Y ++GL D+++ +L++MYSKCG ++KA+
Sbjct: 294 KVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYD 353
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLG 317
+F M +++ SWT+ I G A NG A+ LFA+M + G+ P+ I+F +L++CSH G
Sbjct: 354 IFCGMVKRDNFSWTV-IMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGG 412
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G +F M+ +Y I P +EHYGCMVD+LGRA L+ EA I+ MP P+AV+ RS
Sbjct: 413 LVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSL 472
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR G+V L + + + + LEP VL ++V + + W A ++ I
Sbjct: 473 LFACRTCGEV-GLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK 531
Query: 438 NKVPGCSWVKVNDGSAEE 455
K PGCS+++V DG E
Sbjct: 532 TKQPGCSFIEV-DGCVHE 548
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 149/273 (54%), Gaps = 3/273 (1%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
DN++ + R + +G +H+L K+GL SD ++ NTL+ MY++C A++V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 160 EEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+ P D VSW+++IAG++ P+ AL+ F +M + VTL++ + AC
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G+ H+ V NG E++ +G++L+ MY+KCG VE A ++F+ M ++N WT MISG
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISG 271
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
G+ AI LF M G+K D + S ++S+C +G +D G+ Y ++ +
Sbjct: 272 YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYCDIHGLGK 330
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+ ++DM + G I++AY I M N
Sbjct: 331 DISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDN 363
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 244/446 (54%), Gaps = 12/446 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH +T I ++ + L + SL R LF+ +P +F +N LIR YA
Sbjct: 96 QLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP-KHNIFLWNVLIRGYAWN 154
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+++L+ +M GL PDNFT+PFV+KAC I G +H + + G + D ++G
Sbjct: 155 GPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVG 214
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ MYA C + A+ VF+++ VRD V W+SM+A + P L + M L
Sbjct: 215 AALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLR 274
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P TLV+ +SA + G +H + E + TALV+MY+KCG V A +
Sbjct: 275 PTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNL 334
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + K + SW MI+G A +G A+ LF +M + KPD I+F +LSACSH GL+
Sbjct: 335 FERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLL 393
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +F+ M R Y I PT++HY CMVD+LG +G ++EAY++I M P++ + + L
Sbjct: 394 EEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLN 453
Query: 380 ACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+C+ H V LG++ L++LEP+ NYV+ +++ + +G W+ A+L + +
Sbjct: 454 SCKIHANV-----ELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDR 508
Query: 436 GLNKVPGCSWVKVNDGSAEEMSKETA 461
L K CSW++V + +S +T+
Sbjct: 509 RLKKSIACSWIEVKNKVHAFLSGDTS 534
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
T L P Y ++++C I G +H+ + G D I L+ +Y C +
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F+ +P ++ W+ +I G+ A++++++M P++ T ++ AC +
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G IH + V G E DV +G AL++MY+KCG V A +VF+ + ++ W M
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK-----NYFDEM 329
++ + NG + +SL ++M+ TGL+P + +SA + + +G+ ++ E
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+K +VDM + G + A ++ +
Sbjct: 309 ESHDKVKTA------LVDMYAKCGSVRVARNLFERL 338
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 223/384 (58%), Gaps = 9/384 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I + E++ +F EM G D FT+ V+ ACG L +G G +H+ +
Sbjct: 237 SWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYV 296
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ + ++G+ L+ MY+ C+ I A+ VF+ MP ++V+SW++M+ G+ +A+
Sbjct: 297 IRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAV 356
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K+F M+ P+ TL S++S+C +L ++ G H A+V+GL + + AL+ +Y
Sbjct: 357 KIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLY 416
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG E + ++F M ++ SWT +++G A G+ N I LF +M+ GLKPD ++F
Sbjct: 417 GKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFI 476
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LSACS GLV++G YF+ M + + I P ++H C++D+LGRAG +EEA + I NMP
Sbjct: 477 GVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPC 536
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWD 423
P+ V + L +CR HG D +GK L+ LEP+ A+YVL +S+ + G WD
Sbjct: 537 HPDVVGWATLLSSCRVHG-----DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWD 591
Query: 424 TAAELMVAINQKGLNKVPGCSWVK 447
A+L + K + K PG SW+K
Sbjct: 592 KVAQLRRGMRDKRVRKEPGYSWIK 615
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 71/431 (16%)
Query: 3 SRHIETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFN 58
S + +L++L S+ +LH L LKT T + + I + +L + +F+
Sbjct: 5 SNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFD 64
Query: 59 NLPVTPPLFAYNTLIRAYAK--------------------------------TSCSIESI 86
++P P LF++NT++ Y+K SCS +++
Sbjct: 65 HIP-QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCS-DAV 122
Query: 87 KLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+++ MLK + + T+ ++ C + + +G ++ I K G SD ++G+ L+ M
Sbjct: 123 RVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDM 182
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC----------------DSPS----- 184
Y I AK F+EMP R+VV ++MI G + C DS S
Sbjct: 183 YTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMI 242
Query: 185 ----------DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+AL +F M+LA + + T S+++AC SL+ + G+ IH+Y + +
Sbjct: 243 TGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHK 302
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+V +G+ALV+MYSKC ++ A VF M +KN+ SWT M+ G NG A+ +F +M
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEM 362
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G++PD + +++S+C++L ++EG F A V + + ++ + G+ G
Sbjct: 363 QRNGVEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGS 421
Query: 355 IEEAYHIIRNM 365
E ++ + M
Sbjct: 422 TENSHRLFTEM 432
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y +L++ ++ ++ KL +LKT +P+ F ++ A + + V I
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ L + NT+L +Y+ + + +F MP RD VSW+ I+G+ S SDA++
Sbjct: 68 QPNL----FSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR 123
Query: 189 VFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
V+ M K A + N +T +++ C+ V G I+ + G DV +G+ LV+MY
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMY 183
Query: 248 SK-------------------------------CGHVEKAFKVFNLMREKNLQSWTIMIS 276
+K CG +E++ ++F ++E++ SWTIMI+
Sbjct: 184 TKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMIT 243
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
GL NG A+ +F +M G D +F ++L+AC L + EGK + R + K
Sbjct: 244 GLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT-DHK 302
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ +VDM + I+ A + + MP +
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMPQK 334
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H ++T N + S + + S S+ ++F +P + ++ ++ Y +
Sbjct: 291 QIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAMLVGYGQN 349
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S E++K+F EM + G+ PD+FT V+ +C + G H GL S +
Sbjct: 350 GFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVS 409
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C + + +F EM +RD VSW++++AG+ ++ + +F RM
Sbjct: 410 NALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLK 469
Query: 200 PNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ VT + ++SAC+ V G + S +G+ V T ++++ + G +E+A
Sbjct: 470 PDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARN 529
Query: 259 VFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
N M ++ W ++S + G+ I +A L+P + + +LS+
Sbjct: 530 FINNMPCHPDVVGWATLLSSCRVH--GDMEIGKWAADSLIALEPQNPASYVLLSS 582
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 34/212 (16%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
S +S SL+ C N + +H + + + L L+ Y K G++ A
Sbjct: 2 SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHH 61
Query: 259 VFNLMREKNLQSW-------------------------------TIMISGLADNGRGNYA 287
VF+ + + NL SW + ISG A+ G + A
Sbjct: 62 VFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDA 121
Query: 288 ISLFAKMIQ-TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
+ ++ M++ + + I+FS +L CS VD G+ ++ + + + +V
Sbjct: 122 VRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILK-FGFGSDVFVGSPLV 180
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
DM + GLI +A MP E N V+ + +
Sbjct: 181 DMYTKLGLIYDAKRYFDEMP-ERNVVMCNTMI 211
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 245/434 (56%), Gaps = 2/434 (0%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H+ Q+ + +L + I FI T + L + LF P +F N+LIRA++
Sbjct: 27 HIPQIQAQLILQNLHSHPLIAHHFINTCHHLHLLGSAFLFFTHIPKPHVFICNSLIRAFS 86
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ + L+ M + + P+N+T+PFV+K+ + G SVH+ + K G SD Y
Sbjct: 87 HSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLY 146
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ NTL+ +YA+C ++ + K VF+EM DVVSW+ +I G+ DAL VF +M+ A
Sbjct: 147 VQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDALIVFEQMQYAG 206
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
PN VT+V+ ++AC S + G IH + E+DV LGTAL++MY KCG +++A
Sbjct: 207 VDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTALIDMYGKCGRIKEAL 266
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF M+EKN+ +W + I+GLA G AI+ F +M + G++ D ++ A+LSACSH G
Sbjct: 267 AVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDVTLVAVLSACSHSG 326
Query: 318 LVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
LV+ G+ F + + P ++HY CMVD+L R G IEEA +I +MP E + S
Sbjct: 327 LVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMINDMPFEATRSMWGS 386
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L R HG L + + + L+++EPE G YV+ +++ + G W ++ + ++G
Sbjct: 387 LLTGSRAHGS-LEVSEIAARKLVEMEPENGGYYVVLSNIYAEMGKWSEVEKVREIMKERG 445
Query: 437 LNKVPGCSWVKVND 450
L K G S V++ +
Sbjct: 446 LKKDLGSSSVELQE 459
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 254/474 (53%), Gaps = 39/474 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLH-FTRSLFNNLPVTPPLFAYNTL 72
++ + Q+H L+ LD + I+++ I LT L + + + R + + P F + +
Sbjct: 63 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNP-FLWTAV 121
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR Y E+I ++ M K + P +FT+ ++KACG + +G H+ F++
Sbjct: 122 IRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRG 181
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA----------------- 175
Y+GNT++ MY C I A+ VF+EMP RDV+SW+ +IA
Sbjct: 182 FCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFES 241
Query: 176 --------------GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
GF P +AL+ F RM+ + + VT+ +SAC L +
Sbjct: 242 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 301
Query: 222 ESIHSYAVVNGLELD--VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
+ A +G V +G+AL++MYSKCG+VE+A VF M KN+ S++ MI GLA
Sbjct: 302 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLA 361
Query: 280 DNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+GR A+ LF M+ QT +KP++++F L+ACSH GLVD+G+ F M + + ++PT
Sbjct: 362 THGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPT 421
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+HY CMVD+LGRAG ++EA +I+ M EP+ + + LGACR H + + + L
Sbjct: 422 RDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNP-DIAEIAAEHL 480
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
+LEP++ NY+L ++V S +G+W + I +KGL K P SWV +G
Sbjct: 481 FELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQ 534
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 157/363 (43%), Gaps = 50/363 (13%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA--ACKEIDVAKAVFEEMPVRDVVSWS 171
C+ + +H + + GLD YI L+R + V E + R+ W+
Sbjct: 60 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWT 119
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-V 230
++I G+ +A+ ++ M+ +P S T +L+ AC S+ ++ G H+ +
Sbjct: 120 AVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRL 179
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE------------------------- 265
G V +G +++MY KCG + A KVF+ M E
Sbjct: 180 RGFCF-VYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADL 238
Query: 266 ------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
K++ +WT M++G A N + A+ F +M ++G++ D ++ + +SAC+ LG
Sbjct: 239 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG-- 296
Query: 320 DEGKNYFD---EMARVYNIKPTMEHY---GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
Y D ++A+ P+ +H ++DM + G +EEA ++ +M + N
Sbjct: 297 --ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK-NVFS 352
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLK--LEPELGANYVLAASVSSLSGNWDTAAELMVA 431
S + HG+ D ++ + ++P +V A + S SG D ++ +
Sbjct: 353 YSSMILGLATHGRAQEALDLFHYMVTQTAIKPNT-VTFVGALTACSHSGLVDQGRQVFAS 411
Query: 432 INQ 434
+ Q
Sbjct: 412 MYQ 414
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF--KVFNLMR 264
SL+S IN+ + IH + + GL+ + T L+ +K G + +V ++
Sbjct: 52 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQ 111
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+N WT +I G G+ + AI+++ M + + P S +FSA+L AC +G ++ G+
Sbjct: 112 FRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQ 171
Query: 325 YFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMP 366
+ + R+ + G M+DM + G I A + MP
Sbjct: 172 FHAQTFRLRGF--CFVYVGNTMIDMYVKCGSIVCARKVFDEMP 212
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 225/381 (59%), Gaps = 2/381 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ ++I Y + S +IKLFDEM G+ PD + ++ AC + G VH I
Sbjct: 421 SWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L+++ ++ N L MYA C + A VF M +DV+SW++MI G+ P++AL
Sbjct: 481 RENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEAL 540
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ ++ P+ T+ ++ AC SL + G IH YA+ NG D + A+V+MY
Sbjct: 541 TLFAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMY 599
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG + A +F+++ K+L SWT+MI+G +G G+ AI+ F +M TG++PD +SF
Sbjct: 600 VKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFI 659
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+IL ACSH GL+DEG F+ M + I+P +EHY CMVD+L R G + +A+ I+ MP
Sbjct: 660 SILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPI 719
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+A I + L CR H V L + + + + +LEPE YVL A++ + + W+ +
Sbjct: 720 KPDATIWGALLCGCRIHHDV-KLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQK 778
Query: 428 LMVAINQKGLNKVPGCSWVKV 448
L I Q+GL K PGCSW+++
Sbjct: 779 LRKKIGQRGLKKNPGCSWIEI 799
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 177/316 (56%), Gaps = 3/316 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ L + +F +N +I Y+ + ESI LF +ML+ G++P+++T+ ++K
Sbjct: 205 RMVFDKLSESK-IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 263
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH LI K+G +S + N+L+ Y +++ A+ +F+E+ RDV+SW+SM
Sbjct: 264 VARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM 323
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNG 232
I+G+V +++F +M + + T+V++ AC ++ + G+ +HSY++
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ +V L++MYSKCG + A +VF M EK + SWT MI+G G + AI LF
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G+ PD + ++IL+AC+ G + GK D + R N++ + DM +
Sbjct: 444 EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI-RENNLETNSFVSNALTDMYAKC 502
Query: 353 GLIEEAYHIIRNMPTE 368
G +++A+ + +M +
Sbjct: 503 GSMKDAHDVFSHMKKK 518
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 219/457 (47%), Gaps = 46/457 (10%)
Query: 16 VHHLHQLHTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
V Q+H L K + +NT + S + + + LF+ L + ++N++I
Sbjct: 267 VEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL-TDRDVISWNSMIS 325
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LD 133
Y K I++F +ML G+ D T V AC + +G +HS K LD
Sbjct: 326 GYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLD 385
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ NTLL MY+ C +++ A VFE M + VVSW+SMI G+V A+K+F M
Sbjct: 386 REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEM 445
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
K P+ + S+++AC N+++G+ +H Y N LE + + AL +MY+KCG +
Sbjct: 446 KSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSM 505
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A VF+ M++K++ SW MI G N N A++LFA+M Q KPD + + IL AC
Sbjct: 506 KDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPAC 564
Query: 314 SHLGLVDEG--------KNYFDE-------------------MAR-VYNIKPTME--HYG 343
+ L +D+G +N + E +AR ++++ P + +
Sbjct: 565 ASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWT 624
Query: 344 CMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD-----NLG 395
M+ G G EA ++ +R EP+ V S L AC + G LD+ N+
Sbjct: 625 VMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG---LLDEGWKIFNIM 681
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
K ++EP L +Y + + +GN A + + A+
Sbjct: 682 KKECQIEPNL-EHYACMVDLLARTGNLVKAHKFIKAM 717
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C I G V S+I G+ D +G L+ MY C ++ + VF+++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ W+ MI+ + + +++ +F +M PNS T S++ ++ V G
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H G + +L+ Y V A K+F+ + ++++ SW MISG NG
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
+ I +F KM+ G+ D + + AC+++G + GK + + +
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 344 CMVDMLGRAGLIEEAYHIIRNM 365
++DM + G + A + M
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERM 414
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L RSLF+ +P L ++ +I Y E+I F++M TG+ PD ++ ++
Sbjct: 605 LVLARSLFDMIP-NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILY 663
Query: 110 ACGRCLLIGIGGSVHSLIFK-VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DV 167
AC L+ G + +++ K ++ + ++ + A + A + MP++ D
Sbjct: 664 ACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDA 723
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
W +++ G ++ H +KLA +
Sbjct: 724 TIWGALLCG----------CRIHHDVKLAEK 744
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 236/404 (58%), Gaps = 2/404 (0%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
++ L R +F+ +P + ++NTL+ A++ E++ L EM + G +PD+FT
Sbjct: 120 AVVLESVRKVFDEMP-EKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+ + G +H + G D ++G++L+ MYA C D + VF+ +PVRD
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+ W+SM+AG S +AL +F RM + P VT SL+ AC +L ++ G+ +H+
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
Y + G + +V + ++L++MY KCG+V A ++F+ ++ ++ SWT MI G A +G
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF +M LKP+ I+F A+L+ACSH GLVD+G YF+ M+ Y I P++EH+ +
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALA 418
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
D LGR G +EEAY+ I M +P A + + L AC+ H + L + + K + LEP
Sbjct: 419 DTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTV-LAEEVAKKIFDLEPRSM 477
Query: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++++ ++ S SG W+ AA L ++ +KG+ K P CSW++V +
Sbjct: 478 GSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKN 521
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---------EID 153
+ P +K+C L +G S+H+L + G +D++ N LL +Y CK E+D
Sbjct: 60 SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLY--CKLPAPPSHSPEMD 117
Query: 154 VA-------KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
+ + VF+EMP +DVVSW++++ G +AL + M P+S TL
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS 177
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
S++ +VR G +H +A NG DV +G++L++MY+ C + + KVF+ + +
Sbjct: 178 SVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 237
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+ W M++G A NG + A+ LF +M+ +G+KP ++FS+++ AC +L + GK
Sbjct: 238 DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQ 295
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 39/253 (15%)
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPN-SVTLVSLVSACTSL--INVRA-GESI 224
SW+ I + A+ +F RM+ ++ + S L SL A S + +RA G S+
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 225 HSYAVVNGLELDVALGTALVEMYSKC----GH----------VEKAFKVFNLMREKNLQS 270
H+ A+ +G D AL+ +Y K H +E KVF+ M EK++ S
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG-------- 322
W ++ G A++GR A+ L +M + G KPDS + S++L + V G
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+N F + V + ++DM + + + N+P +A++ S L C
Sbjct: 201 RNGFHDDVFVGS---------SLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCA 250
Query: 383 NHGQVLYLDDNLG 395
+G V D+ LG
Sbjct: 251 QNGSV---DEALG 260
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 241/404 (59%), Gaps = 11/404 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK--------TGLRPDNFTYP 105
R+LF+ +P+ + ++ ++I Y + + ++ LF + L+ + D+
Sbjct: 1197 RALFDEIPLRN-VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 1255
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
V+ AC R GI VH + K G D +GNTL+ YA C + V+K VF+ M +
Sbjct: 1256 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESI 224
D +SW+SMIA + +AL+VFH M + N+VTL +++ AC +RAG+ I
Sbjct: 1316 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCI 1375
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H + LE +V +GT++++MY KCG VE A K F+ M+EKN++SWT M++G +GR
Sbjct: 1376 HDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRA 1435
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ +F KM++ G+KP+ I+F ++L+ACSH GLV+EG ++F+ M Y+I+P +EHYGC
Sbjct: 1436 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC 1495
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+ GRAG + EAY++I+ M +P+ V+ S LGACR H V L + + L +L+P+
Sbjct: 1496 MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNV-DLGEIAAQKLFELDPD 1554
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
YVL +++ + +G W + + + + L K PG S V++
Sbjct: 1555 NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVEL 1598
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 212/395 (53%), Gaps = 33/395 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
L+Q K HL Q+H +++ L ++ + + I L S + + LF + P F
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPCTF 91
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +IRA S +++ L+ M+ G+ D FT+PFV+KAC L I +G VH +
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC------- 180
K G D ++ N L+ Y C A VFE+M VR+VVSW+++I+G ++C
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 181 ------------------------DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
P +AL++F RM+ N PN T+VSL+ ACT +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G IH YA+ N +E+ V LGTAL++MYSKCG ++ A +VF M K+L +W MI+
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
L +G G A++LF++M + +KPD+I+F +L AC H+ V EG YF M + Y I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
P EHY CM ++ R+ ++EA+ + + + N+
Sbjct: 392 PIPEHYECMTELYARSNNLDEAFKSTKEVGSLANS 426
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 189/361 (52%), Gaps = 22/361 (6%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A+ S+E+++ F + K GL P ++P +K+C + G H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
F G ++D ++ + L+ MY+ C ++ A+A+F+E+P+R+VVSW+SMI G+V + +AL
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228
Query: 188 KVFH-------RMKLANESP-NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+F ++ N P +SV +VS++SAC+ + E +H + V G + + +
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 1288
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TG 298
G L++ Y+KCG + KVF+ M EK+ SW MI+ A +G A+ +F M++ G
Sbjct: 1289 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 1348
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGL 354
++ ++++ SA+L AC+H G + GK D++ IK +E+ C ++DM + G
Sbjct: 1349 VRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+E A M E N + + HG+ D K+ + + NY+ S
Sbjct: 1404 VEMAKKTFDRM-KEKNVKSWTAMVAGYGMHGRAKEALDIFYKM---VRAGVKPNYITFVS 1459
Query: 415 V 415
V
Sbjct: 1460 V 1460
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 52/291 (17%)
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
++A ++ + +V SW+S+IA +AL+ F ++ P + + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++L ++ +G H A V G E D+ + +AL++MYSKCG ++ A +F+ + +N+ SWT
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 273 IMISGLADNGRGNYAISLFAKMIQ--------TGLKPDSISFSAILSACSHL-------- 316
MI+G N + + A+ LF ++ + DS+ ++LSACS +
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 317 -----------GLVDEGKNYFDEMARV------YNIKPTMEH-----YGCMVDMLGRAGL 354
G + G D A+ + ME + M+ + ++GL
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 355 IEEAYHI----IRNMPTEPNAVILRSFLGACRN----------HGQVLYLD 391
EA + +R++ NAV L + L AC + H QV+ +D
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 20/476 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNN 59
+ I +L + + L QLH L+T+ + + + S S S +++ +F++
Sbjct: 106 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 165
Query: 60 LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLI 117
+ F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC
Sbjct: 166 IE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 224
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH I K G D Y+ N L+ +Y +C +D+A+ VF+EMP R +VSW+SMI
Sbjct: 225 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 284
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLE 234
V AL++F M+ + E P+ T+ S++SAC L ++ G H++ + +
Sbjct: 285 VRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 343
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+DV + +L+EMY KCG + A +VF M++++L SW MI G A +GR A++ F +M
Sbjct: 344 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 403
Query: 295 I--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ + ++P+S++F +L AC+H G V++G+ YFD M R Y I+P +EHYGC+VD++ RA
Sbjct: 404 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 463
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-------L 405
G I EA ++ +MP +P+AVI RS L AC G + L + + + ++ + +
Sbjct: 464 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 523
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YVL + V + + W+ + +++ G+ K PGCS +++N S E + +T+
Sbjct: 524 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 579
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 249/447 (55%), Gaps = 42/447 (9%)
Query: 44 TSLSISLHFTR-----SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-L 97
T +S+ + F + +LF+ + P + ++N++I Y I +++ F MLK+ L
Sbjct: 216 TMISMHMQFCQFDLALALFDQM-TDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSL 274
Query: 98 RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK------- 150
+PD FT V+ AC + +G +H+ I + +D +GN L+ MYA
Sbjct: 275 KPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHR 334
Query: 151 --------------------------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ID A+A+F+ + RDVV+W++MI G+ S
Sbjct: 335 IVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLIS 394
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
DAL +F M PN+ TL +++S +SL ++ G+ +H+ A+ V++G AL+
Sbjct: 395 DALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALI 454
Query: 245 EMYSKCGHVEKAFKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
MYS+ G ++ A K+FN + ++ +WT MI LA +G GN AI LF KM++ LKPD
Sbjct: 455 TMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDH 514
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
I++ +LSAC+H+GLV++GK+YF+ M V+NI+PT HY CM+D+LGRAGL+EEAY+ IR
Sbjct: 515 ITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIR 574
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
NMP EP+ V S L +CR H V KLLL ++P Y+ A+ S G W+
Sbjct: 575 NMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLL-IDPNNSGAYLALANTLSACGKWE 633
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
AA++ ++ K + K G SWV++ +
Sbjct: 634 DAAKVRKSMKDKAVKKEQGFSWVQIKN 660
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 199/432 (46%), Gaps = 75/432 (17%)
Query: 23 HTLF----LKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
H LF LKT+ NT + + + + +L R +F+ +P P ++ T+I Y
Sbjct: 68 HRLFDEMPLKTTFSWNTILSAH----AKAGNLDSARRVFDEIP-QPDSVSWTTMIVGYNH 122
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++ F M+ +G+ P FT+ V+ +C + +G VHS + K+G +
Sbjct: 123 LGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPV 182
Query: 139 GNTLLRMYAACK-------------------------------EIDVAKAVFEEMPVRDV 167
N+LL MYA C + D+A A+F++M D+
Sbjct: 183 ANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDI 242
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VSW+S+I G+ AL+ F M K ++ P+ TL S++SAC + +++ G+ IH+
Sbjct: 243 VSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHA 302
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFK---------------------------- 258
+ V +++ A+G AL+ MY+K G VE A +
Sbjct: 303 HIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDI 362
Query: 259 -----VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+F+ ++ +++ +WT MI G A NG + A+ LF MI+ G KP++ + +A+LS
Sbjct: 363 DPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVI 422
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
S L +D GK R+ + ++ ++ M R+G I++A I ++ + + +
Sbjct: 423 SSLASLDHGKQLHAVAIRLEEVS-SVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLT 481
Query: 374 LRSFLGACRNHG 385
S + + HG
Sbjct: 482 WTSMILSLAQHG 493
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 45/273 (16%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+F N L+ Y KT S ++ +LFDEM LKT F++
Sbjct: 48 VFLTNNLLNLYVKTGSSSDAHRLFDEMPLKT-----TFSW-------------------- 82
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
NT+L +A +D A+ VF+E+P D VSW++MI G+
Sbjct: 83 ---------------NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFK 127
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
A+ F RM + SP T +++++C + + G+ +HS+ V G V + +L+
Sbjct: 128 SAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLL 187
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG A VF+ MR K+ +W MIS + + A++LF +M PD +
Sbjct: 188 NMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTD----PDIV 243
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
S+++I++ H G F M + ++KP
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKP 276
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 15 TVHHLHQLHTLFLK----TSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
++ H QLH + ++ +S+ +I+ + S S S+ R +FN++ +
Sbjct: 427 SLDHGKQLHAVAIRLEEVSSVSVGNALITMY---SRSGSIKDARKIFNHICSYRDTLTWT 483
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
++I + A+ E+I+LF++ML+ L+PD+ TY V+ AC L+ G S +L+ V
Sbjct: 484 SMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNV 543
Query: 131 -GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIA 175
++ ++ + ++ A MP+ DVV+W S+++
Sbjct: 544 HNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLS 590
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 261/476 (54%), Gaps = 37/476 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLF 67
L+Q+ + Q+H F+ + L R + + +S+S +++ +FN +P +P +F
Sbjct: 31 LLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIP-SPDVF 89
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
AYN +IR +C +S+ L++++L GL PDN+TY FV+K C I G VH +
Sbjct: 90 AYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQV 149
Query: 128 FKVGLDSDKYIGNTLLRMYA-----ACKE--------------------------IDVAK 156
K G+ D +I +L+ MYA AC E ++ A+
Sbjct: 150 IKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKAR 209
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACT 213
A+F++M +D +WS MI G+ +AL +F M + + S PN LVS +SA
Sbjct: 210 AMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATA 269
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L + G IH+Y G ++ + LGT LV+MY+KCG + ++K+F M+++++ +W +
Sbjct: 270 CLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGV 329
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
M+SG A +G+ LF +M+ G +P+ + F AILSACSH G ++ G +YF++M +
Sbjct: 330 MMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDF 389
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
I+P++EHYGCMVD+LGRAG + EA +I +MP EP AVI + L ACR H + L
Sbjct: 390 GIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIH-KDLRRGRR 448
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ L++LEP G Y LA + S +G + A + I + L G S++++N
Sbjct: 449 AFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEIN 504
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 228/385 (59%), Gaps = 8/385 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV----KACGRCLLIGIGGSVH 124
++ L+ + +E+ LF +ML GL F P V +AC + +G +H
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGL---CFLSPTSVASALRACANLSDLCLGKQLH 358
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+L+ K GL +D GN+LL MYA ID A +F++M V+D VS+S++++G+V
Sbjct: 359 ALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKAD 418
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A +VF +M+ N P+ T+VSL+ AC+ L ++ G+ H +V G+ + ++ AL+
Sbjct: 419 EAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALI 478
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG ++ + ++F++M +++ SW MI+G +G G A +LF M +PD +
Sbjct: 479 DMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDV 538
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F ++SACSH GLV EGK +F MA Y I P MEHY MVD+L R G ++EAY I+
Sbjct: 539 TFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQG 598
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP + + + + LGACR H + L + ++ +L PE N+VL +++ S +G +D
Sbjct: 599 MPLKADVRVWGALLGACRVHKNI-DLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDE 657
Query: 425 AAELMVAINQKGLNKVPGCSWVKVN 449
AAE+ + ++G K PGCSW+++N
Sbjct: 658 AAEVRIIQKEQGFKKSPGCSWIEIN 682
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 190/397 (47%), Gaps = 63/397 (15%)
Query: 30 SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
+DHN R I LS++ H LF+ +P P + YN LIRAY+ ++
Sbjct: 68 QIDHN-----RMICGDLSLARH----LFDQIP-APGIHDYNALIRAYSLRGPALALRLYR 117
Query: 90 DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC 149
+ +P+N+T+PFV+KAC L + +VH + GL +D ++ L+ +YA C
Sbjct: 118 SLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKC 177
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
A VF MP RDVV+W++M+AG+ SD + M+ + +PN+ TLV+L+
Sbjct: 178 ASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALL 236
Query: 210 SACTSLINVRAGESIHSYAV----VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
+ G ++H+Y+V ++ + V +GTAL++MY+KCGH+ A +VF M
Sbjct: 237 PLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAV 296
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTG---LKPDSISFSAILSACSHL------ 316
+N +W+ ++ G GR A SLF M+ G L P S+ ++ L AC++L
Sbjct: 297 RNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSV--ASALRACANLSDLCLG 354
Query: 317 -----------------------------GLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
GL+D+ FD+M +K T+ Y +V
Sbjct: 355 KQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV----VKDTVS-YSALVS 409
Query: 348 MLGRAGLIEEAYHIIRNMPT---EPNAVILRSFLGAC 381
+ G +EA+ + R M +P+ + S + AC
Sbjct: 410 GYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPAC 446
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 33/295 (11%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS--LHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH L K+ L H +L+ + + + +LF+ + V +Y+ L+ Y +
Sbjct: 356 QLHALLAKSGL-HTDLTAGNSLLSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVSGYVQ 413
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E+ ++F +M ++PD T ++ AC + G H + G+ S+ I
Sbjct: 414 NGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSI 473
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ MYA C ID+++ +F+ MP RD+VSW++MIAG+ +A +F MK
Sbjct: 474 CNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQAC 533
Query: 199 SPNSVTLVSLVSACTSLINVRAGES-----IHSYAVVNGLELDVALGTALVEMYSKCGHV 253
P+ VT + L+SAC+ V G+ H Y + +E + +V++ ++ G +
Sbjct: 534 EPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI----GMVDLLARGGFL 589
Query: 254 EKAFKVFNLMREK-NLQSW-------------------TIMISGLADNGRGNYAI 288
++A++ M K +++ W + MI L G GN+ +
Sbjct: 590 DEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVL 644
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 229/383 (59%), Gaps = 2/383 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ + I AY + ++I LFDEM G+RPD +T +V AC + G VHS
Sbjct: 637 IVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 696
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G+ S+ + N L+ MYA C ++ A+ VF ++PV+D+VSW++MI G+ P++
Sbjct: 697 YVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNE 756
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F M+ P+ +T+ ++ AC L + G IH + + G D+ + ALV+
Sbjct: 757 ALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVD 815
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A +F+++ +K+L SWT+MI+G +G GN AIS F +M G++PD S
Sbjct: 816 MYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 875
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
FS IL+ACSH GL++EG +F+ M ++P +EHY C+VD+L R G + +AY I +M
Sbjct: 876 FSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESM 935
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P+ I L CR H V L + + + + +LEP+ YV+ A+V + + W+
Sbjct: 936 PIKPDTTIWGVLLSGCRIHHDV-KLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEV 994
Query: 426 AELMVAINQKGLNKVPGCSWVKV 448
+L + ++G + PGCSW++V
Sbjct: 995 KKLRKRMQKRGFKQNPGCSWIEV 1017
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 6/355 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIR 74
V ++H LK NT +++ I + +LF+ L P + ++N++I
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMIN 544
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
S +++F +ML G+ D T V+ A + +G ++H K
Sbjct: 545 GCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSE 604
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ NTLL MY+ C ++ A VF +M +VSW+S IA +V SDA+ +F M+
Sbjct: 605 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQ 664
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
P+ T+ S+V AC ++ G +HSY + NG+ ++ + AL+ MY+KCG VE
Sbjct: 665 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVE 724
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+A VF+ + K++ SW MI G + N N A+ LF M Q KPD I+ + +L AC+
Sbjct: 725 EARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACA 783
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMPTE 368
L +D+G+ + R H C +VDM + GL+ A + +P +
Sbjct: 784 GLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIPKK 836
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 111/221 (50%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
+Y V++ C + G VHS+I G+ D+ +G L+ MY C ++ + +F+++
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
V W+ +++ + + +++ +F +M+ N T ++ +L V+ +
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H Y + G + A+ +L+ Y K G VE A +F+ + E ++ SW MI+G NG
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+ +F +M+ G++ D + ++L A +++G + G+
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGR 591
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 234/395 (59%), Gaps = 9/395 (2%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+IR ++ + + + ML+ + P ++ ++++C +G + H I K+G
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV--VSWSSMIAGFVACDSPSDALKV 189
+ D + LL YA ++ A+ +F+ M R+ V+W++MI+ +V C A+ +
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M+ N P VT+VSL+SAC L + GE IH Y L++DV LG AL++MY K
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG +E A VF+ + KN+ W +I GL NGRG AI+ F M + G+KPD ++F I
Sbjct: 181 CGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI 240
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
LS CSH GL+ G+ YF EM VY ++P +EHYGCMVD+LGRAG ++EA +IR MP +P
Sbjct: 241 LSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 300
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD---TAA 426
N+++L S L AC+ H L + + + LL+L+P G NYV +++ + WD T
Sbjct: 301 NSMVLGSLLRACQIHKDT-KLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCR 359
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+LM+ ++G++K PGCS ++VN+ E ++ +T+
Sbjct: 360 KLMI---KRGVHKTPGCSSIEVNNIVHEFVAGDTS 391
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 54 RSLFNNL-PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R+LF+N+ +NT+I AY + +I +F +M ++P T ++ AC
Sbjct: 85 RNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACA 144
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G +H I L D +GN L+ MY C ++ A VF + +++ W+S
Sbjct: 145 HLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNS 204
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VN 231
+I G +A+ F M+ P+ VT V ++S C+ + AG+ S + V
Sbjct: 205 IIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVY 264
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
GLE V +V++ + G++++A ++ M K
Sbjct: 265 GLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 249/443 (56%), Gaps = 38/443 (8%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S H TRS + P+ P + ++ + I + + E+ F M G+RP++ T+
Sbjct: 37 STKYHLTRS-HTHSPIDP-IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLT 94
Query: 107 VVKACGRCLLIGI--GGSVHSLIFKVGLDSDK-YIGNTLLRMYAACKEIDVAKAVFEEMP 163
++ AC L G+ GGS+H+ + K+GLD++ +G L+ MY+ C ++D+A +F+EM
Sbjct: 95 LLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMH 154
Query: 164 VR-------------------------------DVVSWSSMIAGFVACDSPSDALKVFHR 192
VR D +SW+SMI GFV AL+ F
Sbjct: 155 VRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFRE 214
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+LA P+ VT++S+++AC +L + G I+ + + + ++ + +L++MYS+CG
Sbjct: 215 MQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGC 274
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+ A +VF M +++L SW MI G A NG A+ F M + G +PD +SF+ L+A
Sbjct: 275 IRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTA 334
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH GLVDEG +FD M R I P +EHYGC+VD+ RAG +E+A ++I NMP +PN V
Sbjct: 335 CSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEV 394
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+L S L ACR HG V L + L K L +++P +NYVL +++ + G WD A+++ +
Sbjct: 395 VLGSLLAACRTHGDV-GLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKM 453
Query: 433 NQKGLNKVPGCSWVKVNDGSAEE 455
G++K PG S +++ DGS E
Sbjct: 454 KALGIHKKPGFSSIEM-DGSIHE 475
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 238/435 (54%), Gaps = 46/435 (10%)
Query: 54 RSLFNNLPV----TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
R+L + P TP +N LI + ++ S F +M++TG+ P TY V+
Sbjct: 74 RTLLDAWPARGGDTP--VVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLS 131
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM------- 162
ACG+ I +G VH + G+ D +GN L+ MYA C E+D A +FE M
Sbjct: 132 ACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVS 191
Query: 163 ------------------------PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
P RD VSW++MI G+V +AL++F M+ +
Sbjct: 192 WTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKV 251
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+VS+V+AC L + GE Y +G+++D +G ALV+MYSKCG +++A
Sbjct: 252 RADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALG 311
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++ +WT +I GLA NG G AI++F +M++ PD ++F +L+AC+H GL
Sbjct: 312 VFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGL 371
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VD+G+++F M Y I P + H+GC++D+LGRAG ++EA I NMP PN+ I + L
Sbjct: 372 VDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLL 431
Query: 379 GACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
ACR HG + +G+L LL+L+ E G Y+L +++ + S W+ L I +
Sbjct: 432 AACRVHG-----NSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIME 486
Query: 435 KGLNKVPGCSWVKVN 449
KG+ K PGCS +++N
Sbjct: 487 KGIKKEPGCSLIEMN 501
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 160/341 (46%), Gaps = 45/341 (13%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG-IGGSVHSLIFKVGLDSDKYIGNTLLR 144
++++ ML G RPD +T+P ++KA G +G +VH+ + K G++ + ++ ++L+
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 145 MYAACKEIDVAKAVFEEMPVRD---VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
MYAA + VA+ + + P R V W+++I+G + F M P
Sbjct: 63 MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPT 122
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC----------- 250
VT ++++SAC + G +H V +G+ D+ +G AL++MY++C
Sbjct: 123 PVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFE 182
Query: 251 --------------------GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G V++A +F+ M E++ SWT MI G G+ A+ +
Sbjct: 183 GMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEM 242
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY----NIKPTMEHYGCMV 346
F +M + ++ D + ++++AC+ LG ++ G E AR+Y IK +V
Sbjct: 243 FREMQFSKVRADEFTMVSVVTACAQLGALETG-----EWARIYMSRHGIKMDTFVGNALV 297
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG-ACRNHGQ 386
DM + G I++A + + M LG A HG+
Sbjct: 298 DMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGE 338
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 35 TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
T +IS F+ + R+LF+ +P + ++ +I Y + E++++F EM
Sbjct: 193 TSVISGFLRLG---QVDQARTLFDCMPERDTV-SWTAMIDGYVQAGQFREALEMFREMQF 248
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
+ +R D FT VV AC + + G + + G+ D ++GN L+ MY+ C I
Sbjct: 249 SKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQ 308
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VF+EM +RD +W+++I G +A+ +F+RM E+P+ VT + +++ACT
Sbjct: 309 ALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTH 368
Query: 215 LINVRAGESIH-SYAVVNGLELDVALGTALVEMYSKCGHVEKAFK-VFNLMREKNLQSWT 272
V G S G+ +V L+++ + G +++A + + N+ N W
Sbjct: 369 AGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWG 428
Query: 273 IMIS 276
+++
Sbjct: 429 TLLA 432
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 245/442 (55%), Gaps = 34/442 (7%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L F + +F+ + + L ++NTLI Y++ + E ++LFD M ++ D T ++
Sbjct: 166 QLGFAQKMFDGM-LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKII 224
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMY---------------------- 146
AC S+ I + L+ D Y+GNTL+ MY
Sbjct: 225 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIV 284
Query: 147 ---------AACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
A + A+ +F+ MP RDV+SW+SMI G+ SDA+K+F M A
Sbjct: 285 SWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK 344
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ VT+ S++SAC L + G ++H Y +G++ D+ +G +L++MY KCG VEKA
Sbjct: 345 VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKAL 404
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ M++K+ SWT +ISGLA NG N A+ LF++M++ G++P +F IL AC+H G
Sbjct: 405 EVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAG 464
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G YF+ M V+ + P M+HYGC+VD+L R+G I++AY I+ MP P+ V+ R
Sbjct: 465 LVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRIL 524
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L AC+ HG V+ L + K LL+L+P NYVL ++ + WD A ++ + +
Sbjct: 525 LSACKLHGNVV-LAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDV 583
Query: 438 NKVPGCSWVKVNDGSAEEMSKE 459
K G S ++V DG S+E
Sbjct: 584 QKPSGSSSIEV-DGMVSNYSQE 604
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 196/378 (51%), Gaps = 35/378 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILT-SLS-ISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH ++T L + ++S I + SLS +LH +FN + P L +N +IR ++
Sbjct: 35 ELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIEC-PTLVVWNHMIRGLSQ 93
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ +E+I ++ M G+ +N T F+ KAC R I G +H K+G +S ++
Sbjct: 94 SDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFV 153
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ MYA C ++ A+ +F+ M RD+VSW+++I G+ + + L++F M AN
Sbjct: 154 SNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANI 213
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
++VT+V ++ AC+ L + +S+ Y N LE+DV LG L++MY + E A
Sbjct: 214 KADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQG 273
Query: 259 VFNLMREKNLQ-------------------------------SWTIMISGLADNGRGNYA 287
VF+ MRE+N+ SWT MI+G + + + A
Sbjct: 274 VFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDA 333
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ LF +M+ +KPD ++ +++LSAC+HLG +D G + R + ++ + ++D
Sbjct: 334 VKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLID 392
Query: 348 MLGRAGLIEEAYHIIRNM 365
M + G++E+A + M
Sbjct: 393 MYCKCGMVEKALEVFHRM 410
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 261/482 (54%), Gaps = 44/482 (9%)
Query: 7 ETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNN 59
+TLI L +++ Q+ F+ + L + SR +L+ +IS + + +F
Sbjct: 13 QTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASR-LLSFSAISSWGDIDHSYRIFLQ 71
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P +P + +N++IR ++K S+ +F +ML+ G+ PD+ TYPF+ KA R + +
Sbjct: 72 IP-SPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRL 130
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI--------------------------- 152
+VH I K GL D++I N+L+ MY +C +I
Sbjct: 131 ALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAK 190
Query: 153 ----DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
D A+ VFE MP RDVVSWSSMI G V AL +F RM++ N VT+VS+
Sbjct: 191 CGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSV 250
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN--LMREK 266
+ AC L + G ++H Y V N + + L T+L++MY+KCG +E+A VF M +
Sbjct: 251 LCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQT 310
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF 326
++ W +I GLA +G + ++ LF +M G+ PD I++ + SAC+H GLV E ++F
Sbjct: 311 DVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFF 370
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ + + P EHY CMVD+L RAG + EAY I MP EP A +L + L C NH +
Sbjct: 371 KSLGK-QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRR 429
Query: 387 VLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
L + +G+ L++LEP+ Y+ ++V + WD A + A+ ++G+ K PG S+V
Sbjct: 430 -FDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFV 488
Query: 447 KV 448
+V
Sbjct: 489 EV 490
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 264/486 (54%), Gaps = 50/486 (10%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLF 67
++ T L + H L ++ L ++ + ++ + + H R +F ++P P L
Sbjct: 17 LRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAAR-VFAHVP-APNLH 74
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP---------DNFTYPFVVKACGRCLLIG 118
+N +I+AYA+ ++++++ ML+ P D FTYPF++KACG
Sbjct: 75 LHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQ 134
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------------ 160
+G VH+ + + G +S + N+L+ MY C ++ +A+ VF+
Sbjct: 135 LGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHA 194
Query: 161 -------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
MP + VVSW+++++G+ A + A++VF +M++ P+ V++V+
Sbjct: 195 RMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVA 254
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++ AC L + G I++Y +G+ + + AL+EMY+KCG +E+A ++F+ M EK+
Sbjct: 255 VLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKD 314
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYF 326
+ SW+ I GLA +GR A+ LF M + G + P+ I+F +LSACSH GL+DEG YF
Sbjct: 315 VISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYF 374
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
D M Y ++P++EHYGC+VD+LGR+G I+ A I MP P+ I S L ACR+H
Sbjct: 375 DRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSD 434
Query: 387 VLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
V D + + L++LEPE N V+ A+V + +G W A I + K PGCS
Sbjct: 435 V---DTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCS 491
Query: 445 WVKVND 450
++V++
Sbjct: 492 MIEVDN 497
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 243/431 (56%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+L +K++L N C+ + + + +L +F+ + + ++N +I A+ +
Sbjct: 399 QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAV-SWNAVIAAHEQN 457
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ LF ML+ + PD FTY V+KAC + G +H+ I K GL D ++G
Sbjct: 458 GNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG 517
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ MY C I+ AK + + + + +VSW+++IAGF DA F+ M +
Sbjct: 518 GALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVK 577
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++ T ++ AC +L +V G+ IH + L DV + + LV+MYSKCG+++ + V
Sbjct: 578 PDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALV 637
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F K+ +W MI G A +G G A+ F +M ++P+ +F +IL AC+H+G +
Sbjct: 638 FEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFI 697
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
D+G +YF+ M Y ++P +EHY CM+D++GR+G I EA +I+ MP E +AVI R+ L
Sbjct: 698 DKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ HG + + + +L+LEPE + +L +++ + +G W +E+ + L K
Sbjct: 758 ICKIHGNI-EIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKK 816
Query: 440 VPGCSWVKVND 450
PGCSW++V D
Sbjct: 817 EPGCSWIEVKD 827
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 165/320 (51%), Gaps = 2/320 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL + +FN+LP L YN +I + E+++ F +LK+GL + +
Sbjct: 327 SLADAQRIFNSLP-KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAF 385
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC G +HSL K L S+ + N++L MY C+ + A +F+EM RD V
Sbjct: 386 SACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAV 445
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+++IA + + L +F M P+ T S++ AC+S + +G IH+
Sbjct: 446 SWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI 505
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +GL LD +G AL++MY KCG +E+A K+ + + ++ + SW +I+G A
Sbjct: 506 IKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAH 565
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
S F +M++ +KPD+ +++ +L AC++L V GK ++ ++ + + +VDM
Sbjct: 566 SFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKL-ELHSDVYITSTLVDM 624
Query: 349 LGRAGLIEEAYHIIRNMPTE 368
+ G ++++ + P +
Sbjct: 625 YSKCGNMQDSALVFEKAPNK 644
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 204/408 (50%), Gaps = 25/408 (6%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTS----LDHNTCIISRFILTSLSISLHFTRSLFNNLPVTP 64
L+++ HL+ + +F K S + +NT I ++++ F F + P
Sbjct: 84 LMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEF----FYDTP-KR 138
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSV 123
+ ++N+++ + + +SI +F +M ++ + D T+ V+KAC G+G V
Sbjct: 139 DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQV 198
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H LI ++G D G+ LL MYA CK +D + +F E+PV++ V WS++IAG V D
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
L++F M+ + S+ +C L ++ G +H++A+ D+ +GTA
Sbjct: 259 ILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTAT 318
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY+KCG + A ++FN + + +LQ + +I G N +G A+ F ++++GL +
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNE 378
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLIEEAY 359
IS S SAC+ + +G+ ++K T+ C ++DM G+ + EA
Sbjct: 379 ISLSGAFSACASIKGDLDGRQLHS-----LSVKSTLRSNICVANSILDMYGKCEALSEAC 433
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHG---QVLYLDDNLGKLLLKLEPE 404
+ M +AV + + A +G + L L ++ L L++EP+
Sbjct: 434 CMFDEMERR-DAVSWNAVIAAHEQNGNEEETLNLFASM--LRLRMEPD 478
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 152/308 (49%), Gaps = 6/308 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +PV + ++ +I + I ++LF EM K G+ Y V ++C
Sbjct: 233 IFSEIPVKNWV-CWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLS 291
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H+ K SD +G L MYA C + A+ +F +P + ++++I
Sbjct: 292 ALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIV 351
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G V + +AL+ F + + N ++L SAC S+ G +HS +V + L
Sbjct: 352 GCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRS 411
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
++ + ++++MY KC + +A +F+ M ++ SW +I+ NG ++LFA M+
Sbjct: 412 NICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASML 471
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAG 353
+ ++PD ++ ++L ACS ++ G + R+ ++ + G ++DM + G
Sbjct: 472 RLRMEPDQFTYGSVLKACSSQQALNSGMEIHN---RIIKSGLGLDSFVGGALIDMYCKCG 528
Query: 354 LIEEAYHI 361
+IEEA I
Sbjct: 529 MIEEAKKI 536
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 181/417 (43%), Gaps = 57/417 (13%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN +R + T C+I +++ L T +R T+ +++ C + G H+ +
Sbjct: 17 YNKTLRIF--TFCTISTLQQNQTKLPTKIR----TFSHIIQECSDYNSLKPGKQAHARMI 70
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC-------- 180
G D YI N L++MY C ++ A VFE+M RDV+S+++MI+G+
Sbjct: 71 VSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANE 130
Query: 181 ---DSPS--------------------DALKVFHRMKLANE-SPNSVTLVSLVSACTSLI 216
D+P ++ VF M + E + T ++ AC+ L
Sbjct: 131 FFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLE 190
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G +H V G DV G+AL++MY+KC ++ + K+F+ + KN W+ +I+
Sbjct: 191 DGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIA 250
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G N + LF +M + G+ ++++ +C+ L + G + +
Sbjct: 251 GCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKC-DFG 309
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVILRSFLGACRNHGQVLYLDD 392
+ +DM + G + +A I ++P NA+I +G RN L
Sbjct: 310 SDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAII----VGCVRNEKGFEAL-- 363
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+LLLK LG N + SLSG + A + ++ + L+ + S ++ N
Sbjct: 364 QFFQLLLK--SGLGFNEI------SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN 412
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 246/441 (55%), Gaps = 9/441 (2%)
Query: 8 TLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
TL+ + LHQ H +K+ ++ ++C+++ + + + R +FN
Sbjct: 259 TLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 318
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L + +I Y E++ LF +M G++P+ T V+ CG + +G S+
Sbjct: 319 D-LVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSI 377
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H L KVG+ D + N L+ MYA C + AK VFE +D+V+W+S+I+GF S
Sbjct: 378 HGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 436
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL--ELDVALGT 241
+AL +FHRM + PN VT+ SL SAC SL ++ G S+H+Y+V G V +GT
Sbjct: 437 HEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGT 496
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++ Y+KCG E A +F+ + EKN +W+ MI G G ++ LF +M++ KP
Sbjct: 497 ALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKP 556
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +F+++LSACSH G+V+EGK YF M + YN P+ +HY CMVDML RAG +E+A I
Sbjct: 557 NESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 616
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP +P+ +FL C H + L + + K +L L P+ + YVL +++ + G
Sbjct: 617 IEKMPIQPDVRCFGAFLHGCGMHSR-FDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGR 675
Query: 422 WDTAAELMVAINQKGLNKVPG 442
W A E+ + Q+GL+K+ G
Sbjct: 676 WSQAKEVRNLMKQRGLSKIAG 696
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 39/420 (9%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT---RSLFNN 59
SR L+ + L Q H + L + I ++ L SL S +T R +F+
Sbjct: 56 SRPCFLLLSKCTNIDSLRQAHGVLTGNGLMGDISIATK--LVSLYGSFGYTKDARLVFDQ 113
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + + ++R Y + S E IK +D ++K G D+ + +KAC +
Sbjct: 114 IP-EPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDN 172
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H I KV D + LL MYA C EI + VFE++ +R+VV W+SMIAG+V
Sbjct: 173 GKKIHCQIVKVP-SFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVK 231
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
D + L +F+RM+ + N T +LV ACT L + G+ H + +G+EL L
Sbjct: 232 NDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCL 291
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
T+L++MY KCG + A +VFN +L WT MI G NG N A+SLF KM G+
Sbjct: 292 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGI 351
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARV----YNIKPTMEH-------------- 341
KP+ ++ +++LS C +G ++ G++ +V N+ + H
Sbjct: 352 KPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYV 411
Query: 342 -----------YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQV 387
+ ++ + G I EA + M TE PN V + S AC + G +
Sbjct: 412 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSL 471
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 3/319 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++I Y K E + LF+ M + + + +TY +V AC + + G H +
Sbjct: 222 WTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLI 281
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G++ + +LL MY C +I A+ VF E D+V W++MI G+ S ++AL
Sbjct: 282 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 341
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M PN VT+ S++S C + N+ G SIH ++ G+ D + ALV MY+
Sbjct: 342 LFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYA 400
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC A VF + EK++ +W +ISG + NG + A+ LF +M + P+ ++ ++
Sbjct: 401 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVAS 460
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMPT 367
+ SAC+ LG + G + ++ + + H G ++D + G E A +I +
Sbjct: 461 LFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESA-RLIFDTIE 519
Query: 368 EPNAVILRSFLGACRNHGQ 386
E N + + +G G
Sbjct: 520 EKNTITWSAMIGGYGKQGD 538
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 20/476 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNN 59
+ I +L + + L QLH L+T+ + + + S S S +++ +F++
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 60 LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLI 117
+ F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC
Sbjct: 109 IE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH I K G D Y+ N L+ +Y +C +D+A+ VF+EMP R +VSW+SMI
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLE 234
V AL++F M+ + E P+ T+ S++SAC L ++ G H++ + +
Sbjct: 228 VRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+DV + +L+EMY KCG + A +VF M++++L SW MI G A +GR A++ F +M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 295 I--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ + ++P+S++F +L AC+H G V++G+ YFD M R Y I+P +EHYGC+VD++ RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-------L 405
G I EA ++ +MP +P+AVI RS L AC G + L + + + ++ + +
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YVL + V + + W+ + +++ G+ K PGCS +++N S E + +T+
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 219/353 (62%), Gaps = 4/353 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +PV + ++N +I YA+T E+++LF +M+KT +RPD T VV AC +
Sbjct: 174 QKLFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 232
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VH I G S+ I N L+ +Y+ C E++ A +FE + +DV+SW+++
Sbjct: 233 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTL 292
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + ESPN VT++S++ AC L + G IH Y +
Sbjct: 293 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLK 352
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VF+ M ++L SW MI G A +G+ N A LF
Sbjct: 353 GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLF 412
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+KM + G+ PD I+F +LSACSH G++D G++ F M++ Y I P +EHYGCM+D+LG
Sbjct: 413 SKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGH 472
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
GL +EA +IR MP EP+ VI S L AC+ H V L ++ + L+K+EPE
Sbjct: 473 CGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNV-ELGESYAQNLIKIEPE 524
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 196/388 (50%), Gaps = 41/388 (10%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
L +H +KT L + +S+ I L+ L + S+F + P L +NT+ R
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ-EPNLLIWNTMFR 61
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+A +S + ++ L+ M+ GL P+ +T+PF++K+C + G +H + K+G D
Sbjct: 62 GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121
Query: 135 DKYIGNTLLRMY-------------------------------AACKEIDVAKAVFEEMP 163
D Y+ +L+ MY A+ I+ A+ +F+E+P
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIP 181
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
V+DVVSW++MI+G+ + +AL++F M N P+ T+V++VSAC ++ G
Sbjct: 182 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 241
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H + +G ++ + AL+++YSKCG VE A +F + K++ SW +I G
Sbjct: 242 VHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNIKPTME 340
A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y ++ R+ +
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINK--RLKGVTNASS 359
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
++DM + G IE A + +M T
Sbjct: 360 LLTSLIDMYAKCGDIEAAKQVFDSMLTR 387
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 217/380 (57%), Gaps = 1/380 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+++ +I+ A+ E+I+ F EM GL+ D + + V+ ACG I G +H+ I
Sbjct: 234 SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI 293
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L Y+G+ L+ MY CK + AK VF+ M ++VVSW++M+ G+ +A+
Sbjct: 294 IRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAV 353
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K+F M+ + P+ TL +SAC ++ ++ G H A+ GL + + +LV +Y
Sbjct: 354 KIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLY 413
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG ++ + ++FN M ++ SWT M+S A GR AI LF KM+Q GLKPD ++ +
Sbjct: 414 GKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLT 473
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++SACS GLV++G+ YF+ M Y I P+ HY CM+D+ R+G IEEA I MP
Sbjct: 474 GVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPF 533
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A+ + L ACRN G L + + L++L+P A Y L +S+ + G WD A+
Sbjct: 534 RPDAIGWTTLLSACRNKGN-LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQ 592
Query: 428 LMVAINQKGLNKVPGCSWVK 447
L + +K + K PG SW+K
Sbjct: 593 LRRGMKEKNVRKEPGQSWIK 612
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 214/512 (41%), Gaps = 94/512 (18%)
Query: 3 SRHIETLIQLSKTVH----HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFN 58
S I+ I L + H H + + TL + HN I+ + L SI + R +F+
Sbjct: 7 SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNN-IVHAYALIRSSI---YARRVFD 62
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+P P LF++N L+ AY+K+ E + F+++ D T+ +++ L+G
Sbjct: 63 GIP-QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDR----DGVTWNVLIEGYSLSGLVG 117
Query: 119 ------------------------------------IGGSVHSLIFKVGLDSDKYIGNTL 142
+G +H + K+G +S +G+ L
Sbjct: 118 AAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 177
Query: 143 LRMYAACKEIDVAKAVFEEMPVR------------------------------DVVSWSS 172
L MY+ I AK VF + R D VSWS+
Sbjct: 178 LDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSA 237
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G +A++ F MK+ + S++ AC L + G IH+ +
Sbjct: 238 MIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN 297
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ + +G+AL++MY KC + A VF+ M++KN+ SWT M+ G GR A+ +F
Sbjct: 298 LQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFL 357
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDM 348
M ++G+ PD + +SAC+++ ++EG + + I + HY +V +
Sbjct: 358 DMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKA-----ITAGLIHYITVSNSLVTL 412
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG---QVLYLDDNLGKLLLKLEPEL 405
G+ G I+++ + M + V + + A G + + L D + +L LK +
Sbjct: 413 YGKCGDIDDSTRLFNEMNVR-DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVT 471
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
+ A S + L ELM IN+ G+
Sbjct: 472 LTGVISACSRAGLVEKGQRYFELM--INEYGI 501
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 74/289 (25%)
Query: 104 YPFVVKACGRCLLIGIGGS-----VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
Y +K C IG+G S +H I + + ++ N ++ YA + A+ V
Sbjct: 6 YSAQIKQC-----IGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRV 60
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR-------------------------- 192
F+ +P ++ SW++++ + S+ + F +
Sbjct: 61 FDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 120
Query: 193 ------MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
MK + + VTL++++ +S +V G+ IH + G E + +G+ L++M
Sbjct: 121 KAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDM 180
Query: 247 YSK-------------------------------CGHVEKAFKVFNLMREKNLQSWTIMI 275
YSK CG +E A ++F M EK+ SW+ MI
Sbjct: 181 YSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMI 239
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
GLA NG AI F +M GLK D F ++L AC LG +++G+
Sbjct: 240 KGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQ 288
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 251/467 (53%), Gaps = 40/467 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
L LH +T L +T ++ RF S L + +F+ +P P F YNTLIRA
Sbjct: 23 LKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFDQMP-HPTTFFYNTLIRA 81
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+A ++ S F+ M + + PD F++ F++K+ R + VH + K G
Sbjct: 82 HAHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSRSRTTPLTHHNDVHGAVLKFGFCRH 141
Query: 136 KYIGNTLLRMYA-----------------------------------ACKEIDVAKAVFE 160
++ N L+ YA E++VA+ VF+
Sbjct: 142 LHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDVVSWSGLLVAHVKAGELEVARRVFD 201
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
EMP RDVVSW++M+ G+ P +AL++F M+ + P+ VT+VSLVSAC SL ++
Sbjct: 202 EMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSLVSACASLGDMET 261
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H + NG VAL AL++MY KCG +E+A++VF+ M K+L +W M++ A+
Sbjct: 262 GMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEAWRVFHGMTRKSLITWNTMVTVCAN 321
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
G + A LF M+ +G+ PDS++ A+L A +H GLVDEG F+ M R Y ++P +E
Sbjct: 322 YGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEPRIE 381
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYG ++DMLGRAG ++EAY ++ N+P N + + LGACR HG V + + L K LL+
Sbjct: 382 HYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGALLGACRIHGDV-EMGEKLIKKLLE 440
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L+P+ G Y+L + +G A E A+ K PGCSWV+
Sbjct: 441 LKPDEGGYYILLRDIYVAAGQTVEANETRQAMLASRARKNPGCSWVE 487
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 247/401 (61%), Gaps = 8/401 (1%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRA--YAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVV 108
+ R +F+ +P P +FAYN++IR Y K S E I LF +M+ G P+ FT FV+
Sbjct: 42 YARKIFSQIP-NPGIFAYNSVIRGCLYTKIP-SKEPIHLFKDMVGKGYPNPNTFTMAFVL 99
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + + G +H+ I + G S Y+ ++L+ Y+ C+EI +A+ VF+E+ R++V
Sbjct: 100 KACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLV 159
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
WS+M++G+ ++AL +F M++ P+ V+LV ++SAC + + G+ +H+Y
Sbjct: 160 CWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYI 219
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +D+ L TAL+ MY+KCG +EKA ++F+ MR K+ ++W+ MI GLA +G A+
Sbjct: 220 KKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDAL 279
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
++F++M + KP+ ++F ILSAC+H GLV +GK Y+ M + I+P+MEHYGCMVD+
Sbjct: 280 NVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLEL-GIEPSMEHYGCMVDL 338
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L R GLI+EAY +PT P+ VI R+ L A + + + GK LL+LEP N
Sbjct: 339 LCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGK-LLELEPWKAEN 396
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y++ A++ + + + + + + G+ +PGC+ ++V+
Sbjct: 397 YIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVD 437
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 233/408 (57%), Gaps = 27/408 (6%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N L+ YA+ ++++LF EM+ ++ P+ T+ V+ AC RC + +H I
Sbjct: 604 WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYI 663
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G DKY+ N L+ MY+ ++++K +F M RD+VSW++MI G + C DAL
Sbjct: 664 VKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDAL 723
Query: 188 KVFHRMKLANES------------------PNSVTLVSLVSACTSLINVRAGESIHSYAV 229
+ H M+ PNSVTL++++ C +L + G+ IH+YAV
Sbjct: 724 NLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 783
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
L +DVA+G+ALV+MY+KCG + A +VF+ M +N+ +W ++I +G+G A+
Sbjct: 784 KQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALE 843
Query: 290 LFAKMIQTG------LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
LF M G ++P+ +++ AI +ACSH G+VDEG + F M + ++P +HY
Sbjct: 844 LFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYA 903
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLE 402
C+VD+LGR+G ++EAY +I MP+ N V S LGACR H Q + + K L LE
Sbjct: 904 CLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIH-QSVEFGEIAAKHLFVLE 962
Query: 403 PELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
P + ++YVL +++ S +G WD A + + + G+ K PGCSW++ D
Sbjct: 963 PNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGD 1010
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 139/255 (54%), Gaps = 4/255 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
L+R+ +S ++I + ML PDNF +P V+KA + +G +H+ +FK G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 132 --LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
S + N+L+ MY C ++ A+ VF+++P RD VSW+SMIA + +L +
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLI-NVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M N P S TLVS+ AC+ + VR G+ +H+Y + NG +L ALV MY+
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYA 479
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+ G V A +F + K+L SW +IS L+ N R A+ MI G++PD ++ ++
Sbjct: 480 RLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLAS 539
Query: 309 ILSACSHLGLVDEGK 323
+L ACS L + G+
Sbjct: 540 VLPACSQLERLRIGR 554
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 142/268 (52%), Gaps = 13/268 (4%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVV 108
R +F+++P + ++N++I T C E S+ LF ML + P +FT V
Sbjct: 386 ARQVFDDIPDRDHV-SWNSMI----ATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVA 440
Query: 109 KACGRCLL-IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
AC + +G VH+ + G D Y N L+ MYA ++ AKA+F +D+
Sbjct: 441 HACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDL 499
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+++I+ D +AL + M + P+ VTL S++ AC+ L +R G IH Y
Sbjct: 500 VSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCY 559
Query: 228 AVVNG-LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
A+ NG L + +GTALV+MY C +K VF+ + + + W +++G A N +
Sbjct: 560 ALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQ 619
Query: 287 AISLFAKMI-QTGLKPDSISFSAILSAC 313
A+ LF +MI ++ P++ +F+++L AC
Sbjct: 620 ALRLFVEMISESEFCPNATTFASVLPAC 647
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 217/380 (57%), Gaps = 1/380 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I+ A+ + E+I+ F EM GL+ D + + V+ ACG I G +H+ I
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ Y+G+ L+ MY CK + AK VF+ M ++VVSW++M+ G+ +A+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K+F M+ + P+ TL +SAC ++ ++ G H A+ +GL V + +LV +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG ++ + ++FN M ++ SWT M+S A GR I LF KM+Q GLKPD ++ +
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++SACS GLV++G+ YF M Y I P++ HY CM+D+ R+G +EEA I MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A+ + L ACRN G L + + L++L+P A Y L +S+ + G WD+ A+
Sbjct: 537 PPDAIGWTTLLSACRNKGN-LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 428 LMVAINQKGLNKVPGCSWVK 447
L + +K + K PG SW+K
Sbjct: 596 LRRGMREKNVKKEPGQSWIK 615
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 80/384 (20%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ R +F+ +P P LF++N L+ AY+K E F+++ D T+ +++
Sbjct: 59 YARRVFDRIP-QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGY 113
Query: 112 GRCLLIG------------------------------------IGGSVHSLIFKVGLDSD 135
L+G +G +H + K+G +S
Sbjct: 114 SLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESY 173
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK- 194
+G+ LL MYA I AK VF + R+ V ++S++ G +AC DAL++F M+
Sbjct: 174 LLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK 233
Query: 195 ----------------LANES-------------PNSVTLVSLVSACTSLINVRAGESIH 225
LA E+ + S++ AC L + G+ IH
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+ + + + +G+AL++MY KC + A VF+ M++KN+ SWT M+ G GR
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--- 342
A+ +F M ++G+ PD + +SAC+++ ++EG + + I + HY
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTV 408
Query: 343 -GCMVDMLGRAGLIEEAYHIIRNM 365
+V + G+ G I+++ + M
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 119/293 (40%), Gaps = 79/293 (26%)
Query: 104 YPFVVKACGRCLLIGIGGS--------VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
Y +K C IG+G +H I + + ++ N ++ YA K A
Sbjct: 6 YSVQIKQC-----IGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYA 60
Query: 156 KAV-------------------------------FEEMPVRDVVSWSSMIAGFVACDSPS 184
+ V FE++P RD V+W+ +I G+
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVG 120
Query: 185 DALKVFHRMKLANESPN--SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
A+K ++ M + + S N VTL++++ +S +V G+ IH + G E + +G+
Sbjct: 121 AAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 243 LVEMYSK-------------------------------CGHVEKAFKVFNLMREKNLQSW 271
L+ MY+ CG +E A ++F M EK+ SW
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSW 238
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
MI GLA NG AI F +M GLK D F ++L AC LG ++EGK
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 234/412 (56%), Gaps = 2/412 (0%)
Query: 39 SRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR 98
+R + T +S R +F +P L ++NT+I A+ E++++ EM L+
Sbjct: 178 TRSVRTVSVLSEDSVRKIFEMMP-EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLK 236
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
PD+FT V+ + I G +H + GLD+D Y+ ++L+ MYA C + + V
Sbjct: 237 PDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F + RD +SW+S+IAG V + L+ F +M +A P S + S++ AC L +
Sbjct: 297 FTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTL 356
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ +H Y NG + ++ + ++LV+MY+KCG++ A ++F+ MR +++ SWT MI G
Sbjct: 357 HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGC 416
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ AI LF +M G+KP+ ++F A+L+ACSH GLVDE YF+ M R + I P
Sbjct: 417 ALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPG 476
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHY + D+LGRAG +EEAY I M P I + L ACR H + + + + +
Sbjct: 477 VEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI-DMAEKVANRI 535
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L+++P Y+L A++ S + W AA+ ++ + G+ K P CSW++V +
Sbjct: 536 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 587
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 191/405 (47%), Gaps = 35/405 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
K+ QLH LK + + S LH + LFN + PP A+ ++I
Sbjct: 20 KSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHF-PPALAWKSVI 78
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R Y +S+ F ML +GL PD+ +P V+K+C + + +G S+H I +VGLD
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138
Query: 134 SDKYIGNTLLRMYAACKEI--------------------------------DVAKAVFEE 161
D Y GN L+ MY+ + + D + +FE
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP +D+VSW+++IAG + L++ M AN P+S TL S++ +++ G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH ++ GL+ D+ + ++L++MY+KC V + +VF L+ E++ SW +I+G N
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G + + F +M+ +KP S SFS+I+ AC+HL + GK + R +
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFI 377
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G I A I M + V + + C HGQ
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQ 421
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 20/476 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNN 59
+ I +L + + L QLH L+T+ + + + S S S +++ +F++
Sbjct: 40 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 99
Query: 60 LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLI 117
+ F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC
Sbjct: 100 IE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 158
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH I K G D Y+ N L+ +Y +C +D+A+ VF+EMP R +VSW+SMI
Sbjct: 159 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 218
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLE 234
V AL++F M+ + E P+ T+ S++SAC L ++ G H++ + +
Sbjct: 219 VRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 277
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+DV + +L+EMY KCG + A +VF M++++L SW MI G A +GR A++ F +M
Sbjct: 278 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 337
Query: 295 I--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ + ++P+S++F +L AC+H G V++G+ YFD M R Y I+P +EHYGC+VD++ RA
Sbjct: 338 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 397
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-------L 405
G I EA ++ +MP +P+AVI RS L AC G + L + + + ++ + +
Sbjct: 398 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 457
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YVL + V + + W+ + +++ G+ K PGCS +++N S E + +T+
Sbjct: 458 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 513
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 245/431 (56%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +K LD N C+ + + + + +L +F+++ + + ++N +I A+ +
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAV-SWNAIIAAHEQN 451
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ LF ML++ + PD++T+ VVKAC + G VH + K G+ D ++G
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG 511
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ ++ MY C + A+ + E + R VSW+S+I+GF + +AL F RM
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++ T +++ C +L V G+ IH + L DV + + +V+MYSKCG+++ + +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +++ +W+ MI A +G G AI LF +M +KP+ F ++L AC+H+G V
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
D+G +YF EM Y + P MEHY CMVD+LGR+G + EA +I +MP E + VI R+ LG
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
CR G V + + LL+L+P+ + YVL ++V +++G W A++ + L K
Sbjct: 752 ICRLQGNV-EVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKK 810
Query: 440 VPGCSWVKVND 450
PGCSW++V D
Sbjct: 811 EPGCSWIQVRD 821
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 194/386 (50%), Gaps = 12/386 (3%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LKT+ ++ + + + + + R +FN P P ++N LI YA+
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSHNALIVGYARQ 350
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+E++++F + K+ L D + + AC G +H L K GLD + +
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT+L MYA C + A +F++M ++D VSW+++IA + + L +F M +
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T S+V AC + G +H + +G+ LD +G+A+++MY KCG + +A K+
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ E+ SW +ISG + +G A+S F++M+Q G+ PD+ +++ +L C++L V
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+ GK ++ ++ + + +VDM + G ++++ + P + V + +
Sbjct: 591 ELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKR-DYVTWSAMIC 648
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPEL 405
A HG LG+ +KL E+
Sbjct: 649 AYAYHG--------LGEDAIKLFEEM 666
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 23/381 (6%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
++ F + LF+++P + ++N+++ Y + +SI++F +M ++ D T+ V+
Sbjct: 119 NMEFAQFLFDSMP-ERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVL 177
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC G+G VH L ++G DSD G L+ MY+ CK++D A +F EMP R+ V
Sbjct: 178 KACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSV 237
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
WS++IAG+V D ++ LK++ M + T S +C L G +H+YA
Sbjct: 238 CWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYA 297
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ D +GTA ++MY+KC + A KVFN QS +I G A + A+
Sbjct: 298 LKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEAL 357
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA-RVYNIKPTMEHYGC--- 344
+F + ++ L D IS S L+ACS + K Y + + +K ++ C
Sbjct: 358 EIFRSLQKSYLDFDEISLSGALTACSAI------KGYLEGIQLHGLAVKCGLDFNICVAN 411
Query: 345 -MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLL 399
++DM + G + EA I +M + +AV + + A H Q ++++ L L
Sbjct: 412 TILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA---HEQNEHVEETLALFVSMLRS 467
Query: 400 KLEPELGANYVLAASVSSLSG 420
+EP+ +Y + V + +G
Sbjct: 468 TMEPD---DYTFGSVVKACAG 485
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 31/252 (12%)
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
T+ + + C I G H+ I G ++ N LL+ Y C ++ A VF++
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 162 MPVRDVVSWSSMIAGFVAC----------DSPSD---------------------ALKVF 190
MP RDV+SW++MI G+ DS + ++++F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+M+L + T ++ ACT + + G +H A+ G + DV GTALV+MYS C
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
++ AF +F M E+N W+ +I+G N R + L+ M+ G+ +F++
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 311 SACSHLGLVDEG 322
+C+ L + G
Sbjct: 279 RSCAGLSAFELG 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 47/235 (20%)
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T + C++L + G+ H+ V G V + L++ Y KC ++ AF VF+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M ++++ SW MI G A G +A LF M + D +S++++LS G +
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER----DVVSWNSMLSCYLQNGFHRKS 154
Query: 323 KNYFDEM------------ARVYNIKPTMEHYG----------------------CMVDM 348
F +M A V +E YG +VDM
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFL-GACRN----HGQVLY---LDDNLG 395
++ A++I MP E N+V + + G RN G LY LD+ +G
Sbjct: 215 YSTCKKLDHAFNIFCEMP-ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMG 268
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 248/429 (57%), Gaps = 4/429 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H ++ L NT I + + + L + +F+ + V P+ A L+ Y +
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV-ACTGLMVGYTQA 263
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +++KLF +++ G+ D+F + V+KAC + +G +H+ + K+GL+S+ +G
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ Y C + A F+E+ + VSWS++I+G+ +A+K F ++ N S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 200 P-NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
NS T S+ AC+ L + G +H+ A+ L +AL+ MYSKCG ++ A +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++ +WT ISG A G + A+ LF KM+ G+KP+S++F A+L+ACSH GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V++GK+ D M R YN+ PT++HY CM+D+ R+GL++EA ++NMP EP+A+ + FL
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
C H L L + G+ L +L+PE A YVL ++ + +G W+ AAE+M +N++ L
Sbjct: 564 SGCWTHKN-LELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 439 KVPGCSWVK 447
K CSW++
Sbjct: 623 KELSCSWIQ 631
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 9/319 (2%)
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
T+I AYA+ +++ LF ML +G +P + Y ++K+ + G +H+ + +
Sbjct: 154 TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRA 213
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL S+ I ++ MY C + AK VF++M V+ V+ + ++ G+ DALK+F
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ +S ++ AC SL + G+ IH+ GLE +V++GT LV+ Y KC
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP-DSISFSAI 309
E A + F +RE N SW+ +ISG + A+ F + +S ++++I
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 310 LSACSHLGLVD-EGKNYFDEMARVYNIKPTMEHYG--CMVDMLGRAGLIEEAYHIIRNMP 366
ACS L + G+ + D + R YG ++ M + G +++A + +M
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSL----IGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 367 TEPNAVILRSFLGACRNHG 385
P+ V +F+ +G
Sbjct: 450 N-PDIVAWTAFISGHAYYG 467
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK-YIGNTL 142
E+ + EM K G+ +++Y + +AC + G +H + ++G+++ + N +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124
Query: 143 LRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
L+MY C+ ++ A +F+EM + VS ++MI+ + A+ +F M + + P S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 203 VTLVSLVSACTSLINVRA---GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+L+ SL+N RA G IH++ + GL + ++ T +V MY KCG + A +V
Sbjct: 185 SMYTTLLK---SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K + T ++ G GR A+ LF ++ G++ DS FS +L AC+ L +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 320 DEGKN 324
+ GK
Sbjct: 302 NLGKQ 306
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A + M A S +S + L AC L ++ G +H + V L +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY +C +E A K+F+ M E N S T MIS A+ G + A+ LF+ M+ +G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++ +L + + +D G+ + R T G +V+M + G + A +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG-IVNMYVKCGWLVGAKRVFD 243
Query: 364 NM 365
M
Sbjct: 244 QM 245
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 249/454 (54%), Gaps = 74/454 (16%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNFTYPFVVKAC 111
+F+ +P P F YNTLIR A T+ +++ L+ ML+ G +RPD T+PFV++AC
Sbjct: 34 VFDQIP-RPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRAC 92
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC---------------------- 149
G VH+ + K G +SD ++ N L+ M+A+C
Sbjct: 93 TAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWS 152
Query: 150 ---------KEIDVAKAVFEEMPVRD-------------------------------VVS 169
+I A+ +F+E PV+D VVS
Sbjct: 153 AMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVS 212
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--- 226
W+ MI+G+V C S AL++F +M+ E P+ VT++SL+SAC ++ G+ +HS
Sbjct: 213 WNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLS 272
Query: 227 -YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
NG V LG AL++MY+KCG ++ A +VF MR+K++ +W ++ GLA +G
Sbjct: 273 DMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVL 330
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
+I +F KM++ ++PD I+F A+L ACSH G+VD+G+ +F+ M Y ++P ++HYGCM
Sbjct: 331 ESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCM 390
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VDMLGRAGL++EA+ I M EPN+VI R+ L ACR HG++ L + + LLK +
Sbjct: 391 VDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEI-ELAKHANRQLLKARNDE 449
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+YVL +++ + G W + ++ ++ G+NK
Sbjct: 450 SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 258/482 (53%), Gaps = 43/482 (8%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
++ T L + H L ++ L ++ + ++ + + + +F +P P L
Sbjct: 17 LRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQIP-APNLHL 75
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRP--------DNFTYPFVVKACGRCLLIGIG 120
+N +I+AYA+ ++++++ ML+ P D FTYPF++KACG +G
Sbjct: 76 HNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASRLG 135
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAAC-------------KEIDV------------- 154
VH+ + + G +S + N+L+ MY C +E DV
Sbjct: 136 RQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARM 195
Query: 155 -----AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
A+ +F MP + VVSW+++++G+ A + A++VF M++ P+ V++V+++
Sbjct: 196 GQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVL 255
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
AC L + G I++Y +G+ V + AL+EMY+KCG +E+A ++F+ M EK++
Sbjct: 256 PACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVI 315
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDE 328
SW+ I GLA +GR A+ LF M + G + P+ I+F +LSACSH GLVDEG Y D+
Sbjct: 316 SWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQ 375
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M Y ++P +EHYGC+VD+LGR+G I+ A IR MP P+ I S L ACR+HG V
Sbjct: 376 MKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDV- 434
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ L++LEP N V+ A+V +G W A I + K PGCS ++V
Sbjct: 435 ETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMIEV 494
Query: 449 ND 450
++
Sbjct: 495 DN 496
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 265/519 (51%), Gaps = 78/519 (15%)
Query: 13 SKTVHHLHQLHTLFLKTS--LDH--NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
S ++HHL Q+H + L+T DH + ++ + S +L+F +F +P P +F
Sbjct: 40 STSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFS-NLNFALKVFEYVP-NPNVFV 97
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------------GRCL 115
+N +I+ + + ++I + +M+ RP+ FTYP + KAC +
Sbjct: 98 FNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVI 157
Query: 116 LIGIGGSVH-----------------------------SLIFKVGLD------------- 133
G+ G VH + F +D
Sbjct: 158 KQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKE 217
Query: 134 -----SDKYIG--NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
DK +G N ++ A C I+ A+ +F EM ++ +SWS+MI G++ +A
Sbjct: 218 LFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEA 277
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L+VF+ M+ P L S+++AC +L + G IH+Y N D LGTALV+M
Sbjct: 278 LEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDM 337
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++ A+ VF M +K + +W MI GL +GR AI LF KM + +P+ I+
Sbjct: 338 YAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITL 397
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSAC+H G+VDEG F+ M VY I+P MEHYGC+VD+LGRAGL+ EA ++ +MP
Sbjct: 398 LGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMP 457
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EP+A + + LGACR HG V L + +GK+LL+LEP+ Y L +++ + +G WD A
Sbjct: 458 MEPSAAVWGALLGACRKHGDV-ELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVA 516
Query: 427 ELMVAINQKGLNKVPGCSWV---------KVNDGSAEEM 456
+ + ++G+ G S + K+ DGS +M
Sbjct: 517 NVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQM 555
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 223/384 (58%), Gaps = 8/384 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F L+ YAK +E+ +LF M D + ++ C L G+
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHR----DVVAWNAMIAGCS---LYGLCDDAVQ 196
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
LI ++ + +T++ + C+ + A+ +F+ M VR+ VSWS+MI G+VA D +
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKE 256
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F M+L+ P+ T++ ++ AC+ L ++ G H Y +V G D + AL++
Sbjct: 257 ALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALID 316
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKCG + A +VFN M ++ SW MI G +G G A+ LF ++ GLKPD I+
Sbjct: 317 MYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDIT 376
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LS+CSH GLV EG+ +FD M+R ++I P MEH CMVD+LGRAGLI+EA+H IRNM
Sbjct: 377 FICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNM 436
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P EP+ I + L ACR H + L + + K + L PE N+VL +++ S +G WD A
Sbjct: 437 PFEPDVRIWSALLSACRIHKNI-ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDA 495
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
A + + GL K+PGCSW+++N
Sbjct: 496 AHIRITQKDWGLKKIPGCSWIEIN 519
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 158/323 (48%), Gaps = 51/323 (15%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH---FTRSLFNNLPV 62
+E IQ SK++ ++H FLK + + ++ ++ + LT L +S + R LF+ +P
Sbjct: 15 LEACIQ-SKSLTEAKKIHQHFLKNTSNADSSVLHK--LTRLYLSCNQVVLARRLFDEIP- 70
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P + +N +IRAYA +I L+ ML G+RP+ +TYPFV+KAC L I G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG---FVA 179
+HS GL+SD ++ L+ YA C + A+ +F M RDVV+W++MIAG +
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
CD DA+++ +M+ PNS T+V ++ C L+ R
Sbjct: 191 CD---DAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYAR-------------------- 227
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
K+F++M +N SW+ MI G + A+ +F M +G+
Sbjct: 228 ------------------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGI 269
Query: 300 KPDSISFSAILSACSHLGLVDEG 322
PD + +L ACSHL + G
Sbjct: 270 DPDLTTMLGVLPACSHLAALQHG 292
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 143/283 (50%), Gaps = 13/283 (4%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
Y +++AC + + +H K ++D + + L R+Y +C ++ +A+ +F+E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 163 PVRDVVSWSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
P V+ W+ +I + A + P D A+ ++H M PN T ++ AC+ L+ + G
Sbjct: 70 PNPSVILWNQIIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
IHS+A + GLE DV + TALV+ Y+KCG + +A ++F+ M +++ +W MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G + A+ L +M + G+ P+S + +L C L + FD M +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLY---ARKIFDVMGVRNEVS----- 240
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGAC 381
+ M+ + ++EA I R M +P+ + L AC
Sbjct: 241 WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPAC 283
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 244/440 (55%), Gaps = 14/440 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
SK HL LH F + +HN S+ + R LF+ +PV + ++NT+
Sbjct: 122 SKFHPHLSPLHE-FPQARHNHNN---------KYSVKIDSVRKLFDRMPVRD-VVSWNTV 170
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I A+ E++ + EM K LRPD+FT ++ + G +H + G
Sbjct: 171 IAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGF 230
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
D D +IG++L+ MYA C +++++ F + RD +SW+S+IAG V L F R
Sbjct: 231 DKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRR 290
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M P V+ S++ AC L + G+ +H+Y + G + + + ++L++MY+KCG+
Sbjct: 291 MLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGN 350
Query: 253 VEKAFKVFNL--MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
++ A +FN M ++++ SWT +I G A +G A+SLF +M+ G+KP ++F A+L
Sbjct: 351 IKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVL 410
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+ACSH GLVDEG YF+ M R + + P +EHY + D+LGRAG +EEAY I NM EP
Sbjct: 411 TACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPT 470
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
+ + L ACR H + + + K+LL +GA +V+ +++ S + W AA+L V
Sbjct: 471 GSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGA-HVIMSNIYSAAQRWRDAAKLRV 529
Query: 431 AINQKGLNKVPGCSWVKVND 450
+ + GL K P CSW++V +
Sbjct: 530 RMRKTGLKKTPACSWIEVGN 549
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 24/349 (6%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
TP A+ +I+ YA S+ F+ + G+ PD +P +++A + S
Sbjct: 38 TPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQS 97
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACK----------------------EIDVAKAVFE 160
+H+ + ++G D Y N L+ MY+ +ID + +F+
Sbjct: 98 LHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFD 157
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
MPVRDVVSW+++IAG +AL + M N P+S TL S++ T NV
Sbjct: 158 RMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTK 217
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IH YA+ +G + DV +G++L++MY+KC VE + F+L+ ++ SW +I+G
Sbjct: 218 GKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQ 277
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NGR + + F +M++ +KP +SFS+++ AC+HL ++ GK + R+
Sbjct: 278 NGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL-GFDDNKF 336
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPT-EPNAVILRSFLGACRNHGQVL 388
++DM + G I+ A +I + + + V + + C HG L
Sbjct: 337 IASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHAL 385
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 233/401 (58%), Gaps = 2/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + LF ++ + ++ T+I + + ++K F M +T + P+ FT+ V+
Sbjct: 220 LDYGLRLFESM-TQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVIS 278
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C I G +H+ + + GL + N+++ MY+ C ++D+A VF+ + RD++S
Sbjct: 279 GCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIIS 338
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WS+MI+G+ +A M+ PN S++S C ++ + G+ +H++ +
Sbjct: 339 WSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVL 398
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
GLE + + +AL+ MYSKCG +++A K+F+ N+ SWT MI+G A++G AI
Sbjct: 399 CVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAID 458
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF K+ + GL+PDS++F A+L+ACSH GLVD G +YF+ +++V+ I P+ +HYGCM+D+L
Sbjct: 459 LFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLL 518
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
RAG + +A +I++MP + + V+ + L ACR HG V + +L+L+P +
Sbjct: 519 CRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDV-DCGKRAAEKILQLDPNCAVTH 577
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ A++ + G W AAE+ + KG+ K PG SW+K D
Sbjct: 578 ITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKD 618
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +P+ + ++ +I + + E++ F +M + D +T+ +KAC
Sbjct: 125 VFKEMPLRN-VVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H K G + ++ NTL MY C ++D +FE M RDVVSW+++I
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
V +A+K F RM+ + SPN T +++S C +L + GE +H++ + GL
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+++ +++ MYSKC ++ A VF + +++ SW+ MISG A G G A + M
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G +P+ +F+++LS C ++ ++++GK + V + TM +++M + G I
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQ-SALINMYSKCGSI 422
Query: 356 EEAYHII 362
+EA I
Sbjct: 423 KEASKIF 429
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 141/276 (51%), Gaps = 2/276 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVV 108
L+ R LF+ + + ++ T+I Y + E++ LF +M ++ GL D F +
Sbjct: 17 LNNARQLFDKM-LQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLAL 75
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KACG + + G S+H K + ++G+ L+ MY ++D VF+EMP+R+VV
Sbjct: 76 KACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVV 135
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+++IAG V +AL F M + ++ T S + AC + G IH
Sbjct: 136 SWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQT 195
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ G + L MY+KCG ++ ++F M ++++ SWT +I G+ A+
Sbjct: 196 LKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAV 255
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
F +M +T + P+ +F+A++S C+ LG ++ G+
Sbjct: 256 KAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQ 291
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 62/402 (15%)
Query: 20 HQLHTLFLKTSL-DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH ++ L D + S + S L ++F L + +++T+I YA+
Sbjct: 290 EQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS-RRDIISWSTMISGYAQ 348
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
C E+ M + G RP+ F + V+ CG ++ G +H+ + VGL+ + +
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+ L+ MY+ C I A +F+E ++VSW++MI G+ +A+ +F ++
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+SVT +++++AC S G V+ F
Sbjct: 469 RPDSVTFIAVLAAC-----------------------------------SHAGLVDLGFH 493
Query: 259 VFNLMRE-----KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
FN + + + + MI L GR N A S+ M + D + +S +L AC
Sbjct: 494 YFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSM---PFQRDDVVWSTLLRAC 550
Query: 314 SHLGLVDEGKNYFDEMARVYNIKP--TMEHYGCMVDMLGRAGLIEEAYHIIRNMPT---- 367
G VD GK + ++ + P + H + +M G +EA + + M +
Sbjct: 551 RIHGDVDCGKRAAE---KILQLDPNCAVTHI-TLANMYAAKGKWKEAAEVRKMMKSKGVV 606
Query: 368 -EPNAVILR------SFLGACRNHGQVLYLDDNLGKLLLKLE 402
EP ++ +F+ R+H + Y+ D L L + E
Sbjct: 607 KEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAE 648
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N +L+ ++ A+ +F++M RD +SW+++I+G+V + ++AL +F +M +
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
++SL + AC ++V GES+H Y+V V +G+ALV+MY K G V++
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M +N+ SWT +I+GL G A++ F+ M + D+ +FS+ L AC+ G
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 319 VDEGK 323
++ G+
Sbjct: 185 LNYGR 189
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFS 307
K GH+ A ++F+ M +++ SWT +ISG + A+SLF+KM ++ GL D S
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 308 AILSACSHLGLVDEGKNY---FDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYH 360
L AC G N F E Y++K + +VDM + G ++E
Sbjct: 73 LALKAC--------GLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 361 IIRNMP 366
+ + MP
Sbjct: 125 VFKEMP 130
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 237/427 (55%), Gaps = 33/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + P L + +IRAY + ++++LF M + GL PD VV ACG
Sbjct: 146 RQVFDEMR-QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGL 204
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA------------------ 155
+G+ ++H I K G++ D ++ +TL+ Y C +D A
Sbjct: 205 LGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTM 264
Query: 156 -------------KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
K +F+ MP RDVVSW+SMI GF +AL FH M+ + SPN+
Sbjct: 265 IHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNA 324
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+TL+S +SAC S + G IH+Y N + D +L ++L++MYSKCG ++KA ++F
Sbjct: 325 LTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
++L +WT ++ GLA +GRG A+ F+KM + ++PD ++ +LSAC+H GL+D+G
Sbjct: 385 STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF M +V+ + P +EHYG MVD+LGR G ++EAY +I MP E N +I +FL ACR
Sbjct: 445 WWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACR 504
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
H V L + + LL L P V+ +++ + WD + L I +KGL K PG
Sbjct: 505 VHNNV-ELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPG 563
Query: 443 CSWVKVN 449
CS ++VN
Sbjct: 564 CSSIEVN 570
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 42/336 (12%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEM--LKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+F +NT+IR + L M L+ GLRP+ T+ +++KA + G V
Sbjct: 54 VFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEV 113
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ + + G +++ LL Y AC + + VF+EM +V W+ +I +V P
Sbjct: 114 HASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFP 173
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL++F M+ +P+ V + ++VSAC L ++ +++H + +G+E+D + + L
Sbjct: 174 EKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTL 233
Query: 244 VEMYSKCGHVEKAFK-------------------------------VFNLMREKNLQSWT 272
+ Y +CG ++ A++ +F M ++++ SW
Sbjct: 234 ISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWN 293
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI G A G+ A++ F +M +G+ P++++ + LSAC+ G +D G
Sbjct: 294 SMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGA-----WIHA 348
Query: 333 YNIKPTMEHYG----CMVDMLGRAGLIEEAYHIIRN 364
Y K M G ++DM + G I++A I
Sbjct: 349 YVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 228/405 (56%), Gaps = 8/405 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPD-----NFTY 104
+ + R +F+ + + ++ ++ AY E+++LF ++L L+ D T
Sbjct: 271 IDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLM--LKDDVIVLSAVTL 328
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
V++ C + G +H K G D +GNTLL MYA C I+ A F EM +
Sbjct: 329 ATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL 388
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RD VS++++I+G+V + + L++F M+L+ +P TL S++ AC L + G
Sbjct: 389 RDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCS 448
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H YA++ G D + AL++MY+KCG ++ A KVF+ M ++ + SW MI +G G
Sbjct: 449 HCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIG 508
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF M GLKPD ++F ++SACSH GLV EGK +F+ M + + I P MEHY C
Sbjct: 509 LEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYAC 568
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+L RAGL +E + I MP EP+ + + L ACR + V L + + K + KL PE
Sbjct: 569 MVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNV-ELGEGVSKKIQKLGPE 627
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
N+VL +++ S G WD AA++ ++G K PGCSW++++
Sbjct: 628 STGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEIS 672
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 145/263 (55%), Gaps = 4/263 (1%)
Query: 49 SLHFTRSLFNNLPVTPP-LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFV 107
L R +F+ +P P + +N LIRAYA E+I L+ +ML G+ P+ FT+PFV
Sbjct: 66 ELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFV 125
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV 167
+KAC G +H I ++ L+S+ Y+ L+ YA C +D AK VF++M RDV
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDV 185
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
V+W+SMI+GF + D + + SPNS T+V ++ A + ++R G+ IH +
Sbjct: 186 VAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGF 245
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNY 286
V G DV +GT ++++Y KC ++ A ++F++M KN +W+ M+
Sbjct: 246 CVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMRE 305
Query: 287 AISLFAKMIQTGLKPDSISFSAI 309
A+ LF +++ LK D I SA+
Sbjct: 306 ALELFCQLLM--LKDDVIVLSAV 326
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 5/242 (2%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPVR--DVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ +Y AC E+ +A+ VF++MP R +VV W+ +I + +A+ ++++M +
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T ++ AC++L G IH LE +V + TALV+ Y+KCG ++ A +V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 260 FNLMREKNLQSWTIMISGLA-DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
F+ M ++++ +W MISG + G + L +M Q + P+S + +L A + +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNS 235
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
+ GK R + + G ++D+ G+ I+ A I M N V + +
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294
Query: 379 GA 380
GA
Sbjct: 295 GA 296
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 257/423 (60%), Gaps = 22/423 (5%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRA-----YAKTSCSIESIKLFDEMLKTG-LRPDNFTYP 105
+ R+LF+ +P P F YN+LIRA + S + ++ L+ ML G P++FT
Sbjct: 76 YARALFDQIP-EPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLA 134
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PV 164
FV+KAC +G G +H+ F GL+ Y+ LL +YA C+E+ +A+ VF+ M
Sbjct: 135 FVLKAC---TALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVED 191
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+++V+WSSMI G+ ++AL +F M+ +P+ VT+VS++SAC + G+ +
Sbjct: 192 KNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWV 251
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H++ G+ +D+ L TAL++MY+KCG +E+A VF+ M E++ ++W+ MI GLA +G
Sbjct: 252 HAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLA 311
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF++M+Q ++P++++F +LSAC+H GLVD+G+ Y+ M + I+ +ME+YGC
Sbjct: 312 EDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQEL-GIEASMENYGC 370
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+L R+GL++EA+ + MP PN+VI R+ L A ++ ++ + + + L +LEP+
Sbjct: 371 MVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIV-ELASRRLFELEPQ 429
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN---------DGSAEE 455
NYVL +++ +L+ WD + + + V GCS +++N DGS E
Sbjct: 430 NPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPE 489
Query: 456 MSK 458
+ K
Sbjct: 490 IKK 492
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 233/399 (58%), Gaps = 36/399 (9%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ G PDN+++PFV+KAC R L+ G +HS K+G+ D ++ N L+ +++C
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 152 IDVAKAVFEEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHR----------------- 192
++ A+AVF+ +P VRDVVSW+SMI+G++ ALKVF R
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 193 --------------MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
M++ + ++ T+ ++SAC + G IH Y N +E+D+
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 180
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQT 297
AL+ MYSKCG ++KA ++F+ + + ++ SW+ +ISGLA NG + A+ LF++M + +
Sbjct: 181 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 240
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
++P+ I+F +L AC+H G VD+G YF+ M ++YN+ P +EHYGCMVD+LGRA L+ E
Sbjct: 241 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 300
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
A IR +P +P+ VI RS L ACRNHG + L + K + +LEP VL ++V +
Sbjct: 301 AEKFIRTLPIQPDVVIWRSLLFACRNHGNI-ELAEFAAKQIEELEPRRCGARVLLSNVYA 359
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
+ W + + + + K PGCS+V++ DG E+
Sbjct: 360 SASRWGDVKRVRKDMATQRIKKQPGCSFVEI-DGLVHEL 397
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 263/449 (58%), Gaps = 25/449 (5%)
Query: 21 QLHTLFLKT-SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA-----YNTLIR 74
+LH LK SLD N+ F+ ++L + + + V +F +N +I
Sbjct: 319 ELHAYALKNGSLDENS-----FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373
Query: 75 AYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
YA+ E++ LF EM ++ GL ++ T VV AC R ++H + K GLD
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLD 433
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
D+++ N L+ MY+ +ID+AK +F +M RD+V+W+++I G+V + DAL + H+M
Sbjct: 434 RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKM 493
Query: 194 KL----ANE-------SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++ A+E PNS+TL++++ +C +L + G+ IH+YA+ N L DVA+G+A
Sbjct: 494 QILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 553
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY+KCG ++ + KVF+ + +N+ +W +++ +G AI + M+ G+KP+
Sbjct: 554 LVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPN 613
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F ++ +ACSH G+V+EG F M + Y ++P+ +HY C+VD+LGRAG ++EAY +I
Sbjct: 614 EVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLI 673
Query: 363 RNMPTE-PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+P A S LGACR H L + + + L++LEP + ++YVL A++ S +G
Sbjct: 674 NLIPRNFDKAGAWSSLLGACRIHNN-LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 732
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVND 450
W A E+ + +G+ K PGCSW++ D
Sbjct: 733 WYKATEVRRNMKAQGVRKEPGCSWIEHGD 761
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 157/314 (50%), Gaps = 14/314 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +NT++ + + +E+++ EM+ G+ PD FT V+ AC ++ G +H+
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHA 322
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
K G LD + ++G+ L+ MY CK++ VF+ M R + W++MI G+ +
Sbjct: 323 YALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDE 382
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL +F M+ A NS T+ +V AC E+IH + V GL+ D + AL
Sbjct: 383 EALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNAL 442
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ A ++F M +++L +W +I+G + R A+ + KM
Sbjct: 443 MDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASE 502
Query: 296 ---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ LKP+SI+ IL +C+ L + +GK A N+ + +VDM +
Sbjct: 503 RASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 561
Query: 353 GLIEEAYHIIRNMP 366
G ++ + + +P
Sbjct: 562 GCLQMSRKVFDQIP 575
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
L+R+ +++ E++ + +M+ G++PDNF +P ++KA + +G +H+ ++K G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 132 LDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
D + NTL+ +Y C + VF+ + R+ VSW+S+I+ + + AL+ F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 191 HRMKLANESPNSVTLVSLVSACTSLI---NVRAGESIHSYAVVNGLELDVALGTALVEMY 247
M + P+S TLVS+ AC++ + G+ +H+Y + G EL+ + LV MY
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMY 242
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G + + + ++L +W ++S L N + A+ +M+ G++PD + S
Sbjct: 243 GKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTIS 302
Query: 308 AILSACSHLGLVDEGK 323
++L ACSHL ++ GK
Sbjct: 303 SVLPACSHLEMLRTGK 318
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 68 AYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIG 120
++N+LI + CS E +++ F ML + P +FT V AC + + +G
Sbjct: 162 SWNSLISSL----CSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMG 217
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ + G + + +I NTL+ MY ++ +K + RD+V+W+++++
Sbjct: 218 KQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQN 276
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
+ +AL+ M L P+ T+ S++ AC+ L +R G+ +H+YA+ NG L+ + +
Sbjct: 277 EQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 336
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
G+ALV+MY C V +VF+ M ++ + W MI+G A N A+ LF +M ++ G
Sbjct: 337 GSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAG 396
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
L +S + + ++ AC G + E + +K ++ ++DM R G
Sbjct: 397 LLANSTTMAGVVPACVRSGAFSK-----KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGK 451
Query: 355 IEEAYHIIRNM 365
I+ A I M
Sbjct: 452 IDIAKRIFGKM 462
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W ++ V + +A+ + M + P++ +L+ A L ++ G+ IH++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 230 VNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
G +D V + LV +Y KCG +KVF+ + E+N SW +IS L + A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGL 318
F M+ ++P S + ++ ACS+ +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPM 210
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 250/431 (58%), Gaps = 5/431 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H +KT T + +R I L R + + +P + ++ +I Y++
Sbjct: 71 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQ 129
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
T S E++ +F EM+++ +P+ FT+ V+ +C R + +G +H LI K DS ++
Sbjct: 130 TGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFV 189
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++LL MYA +I+ A+ +FE +P RDVVS +++IAG+ +AL++F R++
Sbjct: 190 GSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGM 249
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN VT SL++A + L + G+ H + + L L +L++MYSKCG++ A +
Sbjct: 250 RPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQR 309
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLG 317
+F+ M E+ SW M+ G + +G G + LF M + +KPD+++ A+LS CSH
Sbjct: 310 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGK 369
Query: 318 LVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ D G + +D M A Y IKP EHYGC+VDMLGRAG I+EA+ I+ MP++P A +L S
Sbjct: 370 MEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 429
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H V + + +G L+++EPE NYV+ +++ + +G W+ + + QK
Sbjct: 430 LLGACRVHLSV-DIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKA 488
Query: 437 LNKVPGCSWVK 447
+ K PG SW++
Sbjct: 489 VTKEPGRSWIQ 499
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 91 EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK 150
EM+ G Y ++ AC + G VH+ + K Y+ LL Y C
Sbjct: 41 EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 100
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A+ V +EMP ++VVSW++MI+ + S+AL VF M ++ PN T ++++
Sbjct: 101 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLT 160
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
+C + G+ IH V + + +G++L++MY+K G +E+A ++F + E+++ S
Sbjct: 161 SCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVS 220
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
T +I+G A G A+ +F ++ G++P+ ++++++L+A S L L+D GK A
Sbjct: 221 CTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ-----A 275
Query: 331 RVYNIKPTMEHYGC----MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ ++ + Y ++DM + G + A + NMP E A+ + L HG
Sbjct: 276 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMP-ERTAISWNAMLVGYSKHG- 333
Query: 387 VLYLDDNLGKLLLKL 401
LG+ +L+L
Sbjct: 334 -------LGREVLEL 341
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 233/395 (58%), Gaps = 3/395 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ +F+ + V P+ A+ L+ Y + + +++KLF +++ G+ D+F + V+KAC
Sbjct: 237 KRVFDQMAVKKPV-AWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACAS 295
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H+ + K+GL+ + +G L+ Y C + A F+E+ + VSWS++
Sbjct: 296 LEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 355
Query: 174 IAGFVACDSPSDALKVFHRMKLANESP-NSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
I+G+ +A+K F ++ N NS T S+ AC+ L + G +H+ A+
Sbjct: 356 ISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 415
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L +AL+ MYSKCG ++ A +VF M ++ +WT ISG A G + A+ LF
Sbjct: 416 LIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 475
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
KM+ G+KP+S++F A+L+ACSH GLV++GK+Y D M R YN+ PT++HY CM+D+ R+
Sbjct: 476 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARS 535
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL++EA ++NMP EP+A+ + FL C H L L G+ L +L+PE A YVL
Sbjct: 536 GLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKN-LELGKIAGEELRQLDPEDTAGYVLP 594
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
++ + +G W+ AAE+M +N++ L K CSW++
Sbjct: 595 FNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQ 629
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 162/317 (51%), Gaps = 5/317 (1%)
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
T+I AYA+ +++ LF ML++G +P + Y ++K+ + IG +H+ + +
Sbjct: 152 TMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRA 211
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL S+ I ++ MY C + AK VF++M V+ V+W+ ++ G+ DALK+F
Sbjct: 212 GLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLF 271
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ +S ++ AC SL +R G+ IH+ GLE +V++GT LV+ Y KC
Sbjct: 272 VDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKC 331
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAI 309
E A + F +RE N SW+ +ISG + A+ F + + + +S ++++I
Sbjct: 332 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSI 391
Query: 310 LSACSHLGLVD-EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
ACS L + G+ + D + R ++ + ++ M + G +++A+ + +M
Sbjct: 392 FQACSVLADCNIGGQVHADAIKR--SLIGSQYGESALITMYSKCGCLDDAHEVFESMDN- 448
Query: 369 PNAVILRSFLGACRNHG 385
P+ V +F+ +G
Sbjct: 449 PDIVAWTAFISGHAYYG 465
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 129/245 (52%), Gaps = 8/245 (3%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI-GNTL 142
E+ + F EM K G+ ++Y + +AC + G +H+ + ++G+++ + N +
Sbjct: 64 EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMGIENPSVLLQNCV 122
Query: 143 LRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
L+MY C ++ A +F+EM + VS ++MI+ + A+ +F RM + + P S
Sbjct: 123 LQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPS 182
Query: 203 VTLVSLVSACTSLINVRA---GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+L+ SL+N RA G IH++ + GL + ++ T +V MY KCG + A +V
Sbjct: 183 SMYTTLLK---SLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRV 239
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K +WT ++ G GR A+ LF +I G++ DS FS +L AC+ L +
Sbjct: 240 FDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEEL 299
Query: 320 DEGKN 324
GK
Sbjct: 300 RFGKQ 304
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A + F M A S + + L AC L ++ G +H+ + V L +
Sbjct: 63 NEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCV 122
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY +CG +E A K+F+ M + N S T MIS A+ G + A+ LF++M+++G KP S
Sbjct: 123 LQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPS 182
Query: 304 ISFSAILSACSHLGLVDEGKN 324
++ +L + + +D G+
Sbjct: 183 SMYTTLLKSLVNPRALDIGRQ 203
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 214/342 (62%), Gaps = 1/342 (0%)
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+A + + + G VHS+ + G +S ++ NTL+ MYAAC + A +FE M R++V
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W+S+I G+ P++AL +F M L P+ T+VSL+SAC L + G H Y
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 122
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V GL+ ++ G AL+++Y+KCG + +A KVF+ M EK++ SWT +I GLA NG G A+
Sbjct: 123 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 182
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF ++ + GL P I+F +L ACSH G+VDEG +YF M Y I P +EHYGCMVD+
Sbjct: 183 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL 242
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAGL+++A+ I+NMP +PNAV+ R+ LGAC HG L L + LL+LEP+ +
Sbjct: 243 LGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH-LALGEVARAQLLQLEPKHSGD 301
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + W ++ + ++G+ K PG S V++ +
Sbjct: 302 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRN 343
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 54/286 (18%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +N++I YA E++ LF EM G+ PD FT ++ AC + +G H
Sbjct: 61 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHV 120
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ KVGLD + + GN LL +YA C I A VF+EM + VVSW+S+I G +
Sbjct: 121 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKE 180
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F ++ P+ +T V ++ AC
Sbjct: 181 ALELFKELERKGLMPSEITFVGVLYAC--------------------------------- 207
Query: 246 MYSKCGHVEKAFKVFNLMREK-----NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
S CG V++ F F M+E+ ++ + M+ L G A M ++
Sbjct: 208 --SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP---MQ 262
Query: 301 PDSISFSAILSACS---HLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
P+++ + +L AC+ HL L E+AR ++ +H G
Sbjct: 263 PNAVVWRTLLGACTIHGHLAL--------GEVARAQLLQLEPKHSG 300
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 221/383 (57%), Gaps = 1/383 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ +I YA++ S +++KLF M +G+RP FT+ V+ AC G VH +
Sbjct: 278 WSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLL 337
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G +S Y+ L+ MYA C I A+ F+ + D+V W+SMI G+V DAL
Sbjct: 338 KLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALS 397
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ RM++ PN +T+ S++ AC+SL + G+ IH+ V G L+V +G+AL MY+
Sbjct: 398 LYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYA 457
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ VF M +++ SW MISGL+ NG G A+ LF +M G KPD ++F
Sbjct: 458 KCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVN 517
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
ILSACSH+GLV+ G YF M + + P +EHY CMVD+L RAG ++EA + +
Sbjct: 518 ILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATID 577
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+ R LGACRN+ + L G+ L++L + + YVL +S+ S G W+ +
Sbjct: 578 HGMCLWRIILGACRNY-RNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERV 636
Query: 429 MVAINQKGLNKVPGCSWVKVNDG 451
+ +G++K PGCSW+++ G
Sbjct: 637 RRMMKLRGVSKEPGCSWIELKSG 659
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P + ++ T+I YA + E++ LF M + + F + V+ A
Sbjct: 163 RKVFDTMPERNSV-SWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTL 221
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L+ G +H + K GL S +GN L+ MYA C +D A FE ++ ++WS+M
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAM 281
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+ ALK+F M L+ P+ T V +++AC+ L G+ +H Y + G
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF 341
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E + + TALV+MY+KC + A K F+ ++E ++ WT MI G NG A+SL+ +
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR 401
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+ P+ ++ +++L ACS L +++GK + Y + + M + G
Sbjct: 402 MEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCG 460
Query: 354 LIEEAYHIIRNMP 366
+++ + R MP
Sbjct: 461 CLKDGTLVFRRMP 473
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 166/321 (51%), Gaps = 4/321 (1%)
Query: 68 AYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
++N +I Y++ S S ++LF M P+ T+ V A + G H+
Sbjct: 73 SWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHA 132
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K+ D ++G++L+ MY A+ VF+ MP R+ VSW++MI+G+ + ++
Sbjct: 133 VAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAE 192
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F M+ E N S++SA T V G+ IH AV NGL V++G ALV
Sbjct: 193 ALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVT 252
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++ A + F +KN +W+ MI+G A +G + A+ LF+ M +G++P +
Sbjct: 253 MYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFT 312
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +++ACS LG EGK D + ++ + + +VDM + I +A +
Sbjct: 313 FVGVINACSDLGAAWEGKQVHDYLLKL-GFESQIYVMTALVDMYAKCSSIVDARKGFDYL 371
Query: 366 PTEPNAVILRSFLGACRNHGQ 386
EP+ V+ S +G +G+
Sbjct: 372 -QEPDIVLWTSMIGGYVQNGE 391
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 3/207 (1%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV- 178
G ++H+ I K S YI N+L+ +YA C+ + AK VFE + +DVVSW+ +I G+
Sbjct: 25 GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83
Query: 179 -ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
S +++F RM+ N +PN+ T + +A ++L++ G H+ A+ DV
Sbjct: 84 HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G++L+ MY K G +A KVF+ M E+N SW MISG A A+ LF M +
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKN 324
+ F+++LSA + LV+ GK
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQ 230
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 155/329 (47%), Gaps = 13/329 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H LK + +++ + + + S+ R F+ L P + + ++I Y +
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ-EPDIVLWTSMIGGYVQN 389
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +++ L+ M G+ P+ T V+KAC + G +H+ K G + IG
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L MYA C + VF MP RDV+SW++MI+G +AL++F M+L
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTALVEMYSKCGHVEKAFK 258
P+ VT V+++SAC+ + V G G++ V +V++ S+ G +++A +
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE 569
Query: 259 VFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFA--KMIQTGLKPDSISFSAILSACSH 315
+ + W I++ G N R NY + +A K+++ G +S ++ + S S
Sbjct: 570 FTESATIDHGMCLWRIIL-GACRNYR-NYELGAYAGEKLMELG-SQESSAYVLLSSIYSA 626
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
LG ++ + + R+ ++ + GC
Sbjct: 627 LGRWED----VERVRRMMKLRGVSKEPGC 651
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 249/439 (56%), Gaps = 5/439 (1%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
++H L Q+H + ++ H+ SR F S S L + LFNN P F +NT
Sbjct: 40 SMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQ-EPNSFMWNT 98
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIRA+A + E++ L+ +M + + P T+PF++KAC + VH+ + K G
Sbjct: 99 LIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLKFG 158
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
LD + ++ N L+R Y+ ++ A+ VF+E+ R + W++MI+G+ ++AL++F
Sbjct: 159 LDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFD 218
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M + PN TL S++SAC + GE IH + G+E+ V LGTALV MY+K G
Sbjct: 219 QMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNG 278
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A K+F+ + E+N +W MI GLA +G A+ F K+ + + P+ I+F +LS
Sbjct: 279 AILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLS 338
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC H GL+ G+ F M RVY I+P +EHYGCMVD+LGR G + EA +I+ M + +
Sbjct: 339 ACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADV 398
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
VIL + LG+C+NHG + + + + K +L LEP YV+ +++ + +G W+ L
Sbjct: 399 VILGALLGSCKNHGNI-EIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKV 457
Query: 432 INQKGLNKVPGCSWVKVND 450
+ L K PG S V ++
Sbjct: 458 MKSGNLKKTPGWSLVDSDN 476
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 231/402 (57%), Gaps = 5/402 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + + + ++ L+ A+ + E++ L +M + P+ T V+ ACG
Sbjct: 167 ARRVFDEM-ASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVVPNEGTLACVLVACG 222
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R G +VH + D +GN +L MY C+++D+A+ VF+ + VRDV+SW+
Sbjct: 223 RLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTI 282
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+G V C PS AL+VF+ M+ + P+ V L +++SACTSL + +G +H Y G
Sbjct: 283 MISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKG 342
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E DV +GT+LV+MY+KCG +E + +F M KNL SW +I+G A +G G A+ F
Sbjct: 343 IEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFD 402
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M+ +GL P+ +SF +L AC H GLV EG F+ M Y + P EHYG +VD+LGRA
Sbjct: 403 RMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRA 462
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GLI EAY + + MP P + L AC+ H QV + L + + +LE Y L
Sbjct: 463 GLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQIL-RHVHELESSESGVYALL 521
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+++ +++ W + +++KGL K PG S ++VN ++E
Sbjct: 522 SNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKTSE 563
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 164/312 (52%), Gaps = 22/312 (7%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGL----RPDNFTYPFVVKACGRCLLIGI----- 119
+N LI + + + F +L G RPD +T P +KAC R G
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 120 -GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G VH++ K G + N L+ +Y C E A+ VF+EM RDVVSW+++++ FV
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
++AL + +M + PN TL ++ AC L RAG+++H + + +L +
Sbjct: 191 RGGRFAEALVLVGQMDVV---PNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLI 247
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G A+++MY KC ++ A +VF+ + +++ SWTIMISGL + A+ +F +M ++
Sbjct: 248 VGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSR 307
Query: 299 LKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGC-MVDMLGRAGL 354
+KPD + S +LSAC+ LG ++ G+ Y + +++ H G +VDM + G
Sbjct: 308 VKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDV-----HVGTSLVDMYAKCGC 362
Query: 355 IEEAYHIIRNMP 366
+E + I R MP
Sbjct: 363 LETSLSIFRKMP 374
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 38/273 (13%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ L V + ++ +I + +++++F+EM K+ ++PD V+
Sbjct: 262 LDLARRVFDRLLVRD-VISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLS 320
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + G VH I + G++ D ++G +L+ MYA C ++ + ++F +MP++++ S
Sbjct: 321 ACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSS 380
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+++I GF +AL+ F RM + +PN V+ + ++ AC HS V
Sbjct: 381 WNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACC-----------HSGLV 429
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLAD-NGRGNYA 287
GL+L F M+ L W + D GR
Sbjct: 430 QEGLQL------------------------FESMKNSYKLSPWEEHYGSVVDLLGRAGLI 465
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
++ ++P ++ A+LSAC VD
Sbjct: 466 HEAYSVTKAMPMRPAVFTWGALLSACQAHRQVD 498
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 243/436 (55%), Gaps = 9/436 (2%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H L+ D + + ++ I + S S+ R +F+ ++ YN L RA +
Sbjct: 90 QRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTR-NRTIYVYNALFRALSL 148
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--GRCL--LIGIGGSVHSLIFKVGLDS 134
E + ++ M G+ D FTY +V+KAC C L+ G +H+ I + G D
Sbjct: 149 AGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDG 208
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+I TL+ MYA + A VF +MPV++VVSWS+MIA + +AL++F +
Sbjct: 209 YVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELM 268
Query: 195 LANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
L + PNSVT+VS++ AC +L + G IH Y + GL+ + + +ALV MY++CG
Sbjct: 269 LETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGK 328
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+E +VF+ M ++++ SW +IS +G G AI +F +M G++P ISF ++L A
Sbjct: 329 LELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGA 388
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH GLVDEGK F+ M + I P++EHY CMVD+LGRA +EEA II NM EP
Sbjct: 389 CSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPK 448
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ S LG+CR H V L + L LEP NYVL A + + +G WD + +
Sbjct: 449 VWGSLLGSCRIHCNV-ELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLL 507
Query: 433 NQKGLNKVPGCSWVKV 448
+GL KVPG SW++V
Sbjct: 508 EARGLQKVPGRSWIEV 523
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 7/221 (3%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P T L+ +CT ++ + +H + + NG + D L T L+ MYS ++ A K
Sbjct: 67 NPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARK 126
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC----S 314
VF+ R + + + + L+ G G ++++ +M G+ D +++ +L AC
Sbjct: 127 VFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASEC 186
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
+ L+++G+ + R + + +VDM + G + A + MP + N V
Sbjct: 187 FVSLLNKGREIHAHILR-HGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVK-NVVSW 244
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+ + +G+ + +L+L+ + +L N V SV
Sbjct: 245 SAMIACYAKNGKAFEALELFRELMLETQ-DLCPNSVTMVSV 284
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 249/439 (56%), Gaps = 5/439 (1%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
++H L Q+H + ++ H+ SR F S S L + LFNN P F +NT
Sbjct: 38 SMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQ-EPNSFMWNT 96
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LIRA+A + E++ L+ +M + + P T+PF++KAC + VH+ + K G
Sbjct: 97 LIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLKFG 156
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
LD + ++ N L+R Y+ ++ A+ VF+E+ R + W++MI+G+ ++AL++F
Sbjct: 157 LDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFD 216
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M + PN TL S++SAC + GE IH + G+E+ V LGTALV MY+K G
Sbjct: 217 QMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNG 276
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A K+F+ + E+N +W MI GLA +G A+ F K+ + + P+ I+F +LS
Sbjct: 277 AILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLS 336
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC H GL+ G+ F M RVY I+P +EHYGCMVD+LGR G + EA +I+ M + +
Sbjct: 337 ACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADV 396
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
VIL + LG+C+NHG + + + + K +L LEP YV+ +++ + +G W+ L
Sbjct: 397 VILGALLGSCKNHGNI-EIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKV 455
Query: 432 INQKGLNKVPGCSWVKVND 450
+ L K PG S V ++
Sbjct: 456 MKSGNLKKTPGWSLVDSDN 474
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 246/453 (54%), Gaps = 42/453 (9%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
+ + LI SKT+ HL Q+H + + LDH+ + + + S+ L ++ +LF
Sbjct: 30 TNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQ 89
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P +F + +I +A + + +LFD M + L
Sbjct: 90 -NPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSL------------------------ 124
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
V L + +L YA E+D A+ +F+ M RD V W+ MI G+
Sbjct: 125 --------VSLTA-------MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNG 169
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
P++AL +F RM A PN VT++S++SAC L + +G +HSY NG++ +V +GT
Sbjct: 170 MPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT 229
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MYSKCG +E A VF+ + +K++ +W MI G A +G A+ LF M + GL P
Sbjct: 230 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHP 289
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+I+F ILSAC H G V EG + F++M Y I+P +EHYGCMV++LGRAG +E+AY +
Sbjct: 290 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYEL 349
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
++NM EP+ V+ + LGACR HG++ L + + +LL+ Y+L +++ + GN
Sbjct: 350 VKNMNIEPDPVLWGTLLGACRLHGKIA-LGEKIVELLVDQNLANSGTYILLSNIYAAVGN 408
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
WD A L + G+ K PGCS ++VN+ E
Sbjct: 409 WDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 441
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 249/432 (57%), Gaps = 6/432 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRF--ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
H+L +K L+ + + + T L SL +F +P+ + + +I+ +
Sbjct: 135 FHSLAIKLRLEGDPYVAPALMNVYTELG-SLEEAHKVFEEVPLKNSVI-WGVMIKGHLNF 192
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
S +LF M ++G D F +++ACG G + H L K +DS+ ++
Sbjct: 193 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFL 252
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+L+ MY C +D A +FEE+ RDVV WS++IAGF +++ +F +M +
Sbjct: 253 QTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSV 312
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+PNSVT S+V AC+SL +++ G S+H Y + NG+ELDV T+ ++MY+KCG + A++
Sbjct: 313 TPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF + EKN+ SW+ MI+G +G A++LF +M P+S++F ++LSACSH G
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGR 432
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
++EG ++F M+R Y I P EHY CMVD+LGRAG I+EA I NMPTEP A + L
Sbjct: 433 IEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
GACR H + L + + K LL LE + YV+ +++ + G W+ + + + +KG++
Sbjct: 493 GACRIHRRA-ELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIH 551
Query: 439 KVPGCSWVKVND 450
K+ G + +++ +
Sbjct: 552 KIVGFTSIEIEE 563
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 198/381 (51%), Gaps = 7/381 (1%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPP 65
+L + +KT+ HQL+ L +L H + + I + SLH FN++
Sbjct: 20 SLFRFTKTLASNHQLNAQILVNAL-HRSLLFGPMIFGAYIQLGSLHVASKAFNHITFEN- 77
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++NT++ +++K C + ++LF MLK G D+F F VKAC L HS
Sbjct: 78 LHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHS 137
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K+ L+ D Y+ L+ +Y ++ A VFEE+P+++ V W MI G +
Sbjct: 138 LAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFG 197
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALV 244
++F RM+ + + + L+ AC ++ + G++ H + N ++ + L T+LV
Sbjct: 198 VFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLV 257
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY KCG ++ A K+F + +++ W+ +I+G A NGR +IS+F +M+ + P+S+
Sbjct: 258 DMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSV 317
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F++I+ ACS LG + +G++ M R ++ +++Y +DM + G I AY +
Sbjct: 318 TFASIVLACSSLGSLKQGRSVHGYMIR-NGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376
Query: 365 MPTEPNAVILRSFLGACRNHG 385
+P E N + + HG
Sbjct: 377 IP-EKNVFSWSTMINGFGMHG 396
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 232/406 (57%), Gaps = 2/406 (0%)
Query: 45 SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTY 104
S S+S+ R +F +P L ++NT+I A+ E++ + EM L+PD+FT
Sbjct: 245 SHSMSVDSVRKIFEMMP-EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTL 303
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
V+ + I G +H + GLD++ Y+ ++L+ MYA C + + VF +
Sbjct: 304 SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE 363
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RD +SW+S+IAG V + LK F +M +A P S + S++ AC L + G+ +
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 423
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H Y NG + ++ + ++LV+MY+KCG++ A ++F+ MR +++ SWT MI G A +G
Sbjct: 424 HGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHA 483
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
AI LF +M G++P+ ++F A+L+ACSH GLVDE YF+ M + I P +EHY
Sbjct: 484 LDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAA 543
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
+ D+LGRAG +EEAY I MP P + + L ACR H V + + + +L+++P+
Sbjct: 544 VSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNV-DMAEKVANRILEVDPK 602
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L A++ S + W AA+ ++ + G+ K P CSW++V +
Sbjct: 603 NTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRN 648
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 172/414 (41%), Gaps = 58/414 (14%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
K+ QLH LK + + S LH + LFN L PP A+ ++I
Sbjct: 22 KSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHF-PPALAWKSVI 80
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R Y +S+ F ML +GL PD+ +P V+KAC + + +G S+H I +VGLD
Sbjct: 81 RCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLD 140
Query: 134 SDKYIGNTLLRMYAACKEIDV-------AKAVFEEMPVRD-VVSWSSMIAGFVACDSPSD 185
D Y GN L+ MY+ + + A V +EM R V +S++ G
Sbjct: 141 FDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG--------- 191
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
N VS + A ++ R+ E LE+D + E
Sbjct: 192 ---------------NQGRKVSDIEAFNYDVSCRSRE-----FEAQVLEIDYKPRSEYRE 231
Query: 246 M-----------YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
M S V+ K+F +M EK+L SW +I+G A NG +++ +M
Sbjct: 232 MEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM 291
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
LKPDS + S++L + + +GK R + + ++DM +
Sbjct: 292 GGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIR-QGLDAEVYVASSLIDMYAKCTR 350
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPE 404
+ ++Y + + TE + + S + C +G D+ L L+ K++P+
Sbjct: 351 VVDSYRVF-TLLTERDGISWNSIIAGCVQNG---LFDEGLKFFRQMLMAKIKPK 400
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 249/454 (54%), Gaps = 74/454 (16%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNFTYPFVVKAC 111
+F+ +P P F YNTLIR A T+ +++ L+ ML+ G +RPD T+PFV++AC
Sbjct: 34 VFDQIP-RPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRAC 92
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC---------------------- 149
G VH+ + K G +SD ++ N L+ M+A+C
Sbjct: 93 TAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWS 152
Query: 150 ---------KEIDVAKAVFEEMPVRD-------------------------------VVS 169
+I A+ +F+E PV+D VVS
Sbjct: 153 AMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVS 212
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--- 226
W+ MI+G+V C S AL++F +M+ E P+ VT++SL+SAC ++ G+ +HS
Sbjct: 213 WNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLS 272
Query: 227 -YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
NG V LG AL++MY+KCG ++ A +VF MR+K++ +W ++ GLA +G
Sbjct: 273 DMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVL 330
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
+I +F KM++ ++PD I+F A+L ACSH G+VD+G+ +F+ M Y ++P ++HYGCM
Sbjct: 331 ESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCM 390
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VDMLGRAGL++EA+ I M EPN+VI R+ L ACR HG++ L + + LLK +
Sbjct: 391 VDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEI-ELAKHANRQLLKARNDE 449
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+YVL +++ + G W + ++ ++ G+NK
Sbjct: 450 SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI----QTGLKPDSISF 306
G + A+ VF+ + + + +I G A A+SL+ +M+ G++PD ++F
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 307 SAILSACSHLGLVDEG 322
+L AC+ +G D G
Sbjct: 86 PFVLRACTAMGAGDTG 101
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 246/431 (57%), Gaps = 4/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +K LD N I + I + S + + +F+ + + L ++ T+I AYA+
Sbjct: 234 EIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYAQN 292
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+C E++KL ++ G+ D + AC + VH K GL SD +
Sbjct: 293 NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQ 351
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N ++ +YA C I+ A +FE + +DVVSW+SMI+ +V ++AL VF+ MK +
Sbjct: 352 NMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+S+TLVS++SA SL + G+ IH + G L+ + +LV+MY+ CG +E A+KV
Sbjct: 412 PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKV 471
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F R K+L WT MI+ +GRG A+ LF+ M L PD I+F A+L ACSH GL+
Sbjct: 472 FICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLI 531
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EGK + M Y ++P EHY C+VD+LGRA +EEAYH +++M EP A + +FLG
Sbjct: 532 NEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLG 591
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H L + + LL L+P+ +YVL ++V + SG W E+ + + GL K
Sbjct: 592 ACRIHSNK-KLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKK 650
Query: 440 VPGCSWVKVND 450
PGCSW++V +
Sbjct: 651 NPGCSWIEVGN 661
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 165/311 (53%), Gaps = 1/311 (0%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
+ +H ++H L +K D + + + + + + R LF+ + + ++N++
Sbjct: 24 EDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSI 83
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I AY+ +E++ LF EM K G+ + +T ++AC +G +H+ I K
Sbjct: 84 ISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQ 143
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
D Y+ N L+ M+ ++ A +F+E+ +D ++W+SMIAGF ++AL+ F
Sbjct: 144 VLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCG 203
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
++ AN P+ V+L+S+++A L + G+ IH+YA+ N L+ ++ +G L++MYSKC
Sbjct: 204 LQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCC 263
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
V A VF+ M K+L SWT +I+ A N A+ L K+ G+ D++ + L A
Sbjct: 264 VAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLA 323
Query: 313 CSHLGLVDEGK 323
CS L + K
Sbjct: 324 CSGLRCLSHAK 334
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 96 GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
G+ D+FT+P V+KACG I G +H LI K G DS ++ N+L+ MYA C +I A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 156 KAVFEEMPVR-DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
+ +F+ M R DVVSW+S+I+ + +AL +F M+ A N+ TLV+ + AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ G IH+ + + LDV + ALV M+ + G + A ++F+ + EK+ +W M
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNYF 326
I+G NG N A+ F + LKPD +S +IL+A LG + G KN+
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244
Query: 327 DEMARVYNIKPTMEHYGCMVDMLG 350
D R+ N M C V G
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAG 268
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++I + + E+++ F + L+PD + ++ A GR + G +H+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K LDS+ IGNTL+ MY+ C + A VF++M +D++SW+++IA + + ++ALK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ +++ +++ + S + AC+ L + + +H Y + GL D+ + ++++Y+
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYA 359
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
CG++ A ++F ++ K++ SWT MIS NG N A+ +F M +T ++PDSI+ +
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVS 419
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
ILSA + L +++GK + R +VDM G +E AY +
Sbjct: 420 ILSAAASLSALNKGKEIHGFIFR-KGFMLEGSTVNSLVDMYACCGSLENAYKVF 472
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 255/444 (57%), Gaps = 33/444 (7%)
Query: 37 IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG 96
IIS ++ SL + LF L F +NT+++A+ + + ++ + L+ ML++
Sbjct: 49 IISLHAHSNARSSLFYAERLFLCLQ-NKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESN 107
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID--- 153
P+NFT+ FV++AC + +G H + K G +S ++ N L+ +YA C +D
Sbjct: 108 YLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLAR 167
Query: 154 ----------------------------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+A+ +F+ MP ++ VSW ++IAG+V +
Sbjct: 168 NMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKE 227
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+VF+ M+++ N ++V ++AC L + G IH+Y + + LD LGTAL++
Sbjct: 228 ALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALID 287
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG +E A VF+ M ++++ ++T +ISGLA++ + AI LF +M G+ P+ ++
Sbjct: 288 MYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVT 347
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +L+ACS +G+VDEG F+ M+ Y I+P ++HYGC+VD+LGRAG IEEA ++R M
Sbjct: 348 FVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREM 407
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P++ L + L ACR HG V L + + L++ + G +VL +++ + + W+ A
Sbjct: 408 PLQPDSYTLGALLDACRVHGDV-QLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDA 466
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
+++ + K + K+PGCS ++VN
Sbjct: 467 SKIRKKMEDKNIRKLPGCSSIEVN 490
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 249/435 (57%), Gaps = 13/435 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H +K LD + + I + L R +F+ + + L +N++I + +
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMS-SRDLVTWNSIISGHEQGG 250
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD-SDKYIG 139
++++F M +G+ PD T + A +C I G SVH + + G D D G
Sbjct: 251 QVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG 310
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF-HRMKLANE 198
N ++ MYA +I+ A+ +F+ MPVRD VSW+++I G++ S+A+ V+ H K
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGL 370
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P T VS++ A + L ++ G +H+ ++ GL LDV +GT ++++Y+KCG +++A
Sbjct: 371 KPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAML 430
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F ++ W +ISG+ +G G A+SLF++M Q G+ PD ++F ++L+ACSH GL
Sbjct: 431 LFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGL 490
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VD+G+N+F+ M Y IKP +HY CMVDM GRAG +++A+ IRNMP +P++ I + L
Sbjct: 491 VDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALL 550
Query: 379 GACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
GACR HG V +GK+ L +L+P+ YVL +++ + G WD E+ + +
Sbjct: 551 GACRIHGNV-----EMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605
Query: 435 KGLNKVPGCSWVKVN 449
+ L K PG S ++V
Sbjct: 606 QNLQKTPGWSSIEVK 620
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP----DNFTYPFVVKACGRCLLI 117
V PL NTLI A+++ S ++ L +L + D FT+P +++A
Sbjct: 28 VHAPLLLANTLISAFSRASLPRLALPLLRHLLLSSPLLPLRPDAFTFPPLLRAAQG---P 84
Query: 118 GIGGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
G +H+ ++GL D + L+ Y + A F+EM RDV +W++M++G
Sbjct: 85 GTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSG 144
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
++A+ +F RM + + ++VT+ S++ C L + ++H YAV +GL+ +
Sbjct: 145 LCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDE 204
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ + A++++Y K G +E+ KVF+ M ++L +W +ISG G+ A+ +F M
Sbjct: 205 LFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRD 264
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+G+ PD ++ ++ SA + G + G++ M R + +VDM + IE
Sbjct: 265 SGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIE 324
Query: 357 EAYHIIRNMPTE 368
A + +MP
Sbjct: 325 AAQRMFDSMPVR 336
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 237/397 (59%), Gaps = 3/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACG 112
R +F+ + + ++ T+I +A+ E+++LFD M+K+ ++P+ T V+ AC
Sbjct: 140 RKVFDKME-DKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA 198
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R + + +H I + G + L+ +Y C + +A+ +F++ +++ SW+
Sbjct: 199 RARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNI 258
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G V + +AL +F M+ + VT+ SL+ ACT L + G+ +H+Y
Sbjct: 259 MINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR 318
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+++DVALGTALV+MY+KCG +E A +VF+ M EK++ +WT +I GLA G+ A+ F
Sbjct: 319 IDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFD 378
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G+KPD+I+F +L+ACSH G VDEG ++F+ M+ Y I+PT+EHYG +VD+LGRA
Sbjct: 379 EMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRA 438
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G I EA +I++MP P+ +L LGACR HG L + K LL+++P YVL
Sbjct: 439 GRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGN-LEAAERAAKQLLEIDPYHSGTYVLL 497
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ S W+ A + ++G+ K PGCS ++V+
Sbjct: 498 SNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVH 534
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 192/355 (54%), Gaps = 9/355 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI-LTSL--SISLHFTRSLFNNLPVTPPLFAYNTLIR 74
L Q+H L+T L + S+ + SL S SL + R +F+ +P P + N++IR
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIP-NPTSYTCNSIIR 61
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+ E++ + EM+ GL PD +T+P + K+C G +H K+G S
Sbjct: 62 GCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFAS 118
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR-M 193
D Y NTL+ MY+ C + A+ VF++M + VVSW++MI D P++A+++F R M
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
K N PN VTLV++++AC ++ + IH Y +G V L T L+++Y KCG V
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A +F+ +EKNL SW IMI+G ++ A+ LF +M G+K D ++ +++L AC
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLAC 298
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+HLG ++ GK + + I + +VDM + G IE A + MP +
Sbjct: 299 THLGALELGK-WLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK 352
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 239/397 (60%), Gaps = 14/397 (3%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT--GLRPDNFTYPFVVKACGRCLLIGIG 120
+P +FA+N ++A A+ S +I+ F+ + + PD FT+ V+KAC + G
Sbjct: 52 SPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNG 111
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGFV 178
+H+++ K G +S+ ++ N+L+ MY + +A+ +F+EM VRD VV W++MIAG+
Sbjct: 112 QKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYA 171
Query: 179 ACDSPSDALKVFHRMK-LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+ SDA++VF M+ PN VTLVS++ AC L + G+ I + + L +
Sbjct: 172 QNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGL 231
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
LG AL +MY+KCG + +A +VFN M E+++ SW+I+I GLA G + A F +M+
Sbjct: 232 FLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDC 291
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G KP+ + F +L+AC+H GLV +G N F+ M + Y + P +EHYGC+VD+L RAG +++
Sbjct: 292 GEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDK 351
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAA 413
A +I +MP +PN +I + LG CR +Y D G+ +L+L+ + +YV A
Sbjct: 352 AEDMISSMPMKPNVIIWGALLGGCR-----IYRDSGRGQRVVQHILELDSDHSGSYVYLA 406
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+V S G D AA+ + + + G+ K PGCSW++V++
Sbjct: 407 NVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDN 443
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 277/513 (53%), Gaps = 86/513 (16%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTPPLFAY 69
K++ L Q+H +KT+L ++ +SR I L+ +S L + S+F+ + P F +
Sbjct: 17 KSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ-HPNSFIF 75
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-----TGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LI+ ++ TS +ES+ L+ ML +G+ F+ P V+KACG+ L G VH
Sbjct: 76 FALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFDEGRQVH 132
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF------- 177
+ K L D ++GN+++RMY EI++A+ VF+ MP RDVVSW+SMIAG+
Sbjct: 133 GQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIE 192
Query: 178 --------------VACDSPSD----------ALKVFHRMK--------------LANES 199
V+C++ D A KVF M + N
Sbjct: 193 LASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRC 252
Query: 200 P-----------------NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA-LGT 241
P + +VS++SA L V G+ +H+Y +N +EL +G+
Sbjct: 253 PMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGS 312
Query: 242 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL++MYSKCG++E A+ VF ++ +N+ W MISGLA +G A+ +F +M + ++
Sbjct: 313 ALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIE 372
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ I+F +LS CSH GLV+EG+ YF+ M Y I P ++HYGCM+D+ GRAG +E+A
Sbjct: 373 PNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALG 432
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVS 416
+I+NMP E + + ++ L A HG + +GK ++L P+ ++YVL +++
Sbjct: 433 VIQNMPFEADLLAWKAILSASMKHGHI-----EIGKSAALRAIELAPDDSSSYVLLSNIY 487
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ +G WD A++ + + Q+G+ K+ GCS + VB
Sbjct: 488 AKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVB 520
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 247/433 (57%), Gaps = 7/433 (1%)
Query: 22 LHTLFLKTSLDHN--TCIISRFILTSLSISLHFTRS--LFNNLPVTPPLFAYNTLIRAYA 77
+H L+ LD N +I +L + H + +F+ + V + ++ LI +
Sbjct: 223 VHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV-TWSALIGGFV 281
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFT-YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
E+ LF +ML G+ + T ++ C + +G +H+L+ K G+ +D
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
GN+LL MYA I+ A +F+E+ ++D +S+ ++++G+V +A VF +M+
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ T+VSL+ AC+ L ++ G H ++ GL L+ ++ +L++MY+KCG ++ +
Sbjct: 402 NVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLS 461
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF+ M +++ SW MI+G +G G A +LF M G +PD ++F +++ACSH
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV EGK++FD M Y I P MEHY CMVD+L R G ++EAY I++MP + + + +
Sbjct: 522 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGA 581
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H + L + +++ KL PE N+VL +++ S +G +D AAE+ + KG
Sbjct: 582 LLGACRIHKNI-DLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKG 640
Query: 437 LNKVPGCSWVKVN 449
K PGCSW+++N
Sbjct: 641 FKKSPGCSWIEIN 653
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 183/378 (48%), Gaps = 53/378 (14%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L R +F+ +P P AYN LIRAY+ +I L+ ML + P+ +T+PFV+
Sbjct: 48 QLALARQVFDRIP-APDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + G ++H+ VGL +D ++ L+ +Y C A VF +MP+RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIH 225
+W++M+AG+ A+ H + + + PN+ TLVSL+ + G S+H
Sbjct: 167 AWNAMLAGYANHGMYHHAIA--HLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224
Query: 226 SY---AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+Y A ++ E V +GTAL++MY+KC H+ A +VF+ M +N +W+ +I G
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCD 284
Query: 283 RGNYAISLFAKMI------------------------------------QTGLKPDSISF 306
R A +LF M+ ++G+ D +
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LS + GL++E FDE+A IK T+ YG ++ + G EEA+ + + M
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIA----IKDTIS-YGALLSGYVQNGKAEEAFLVFKKMQ 399
Query: 367 T---EPNAVILRSFLGAC 381
+P+ + S + AC
Sbjct: 400 ACNVQPDIATMVSLIPAC 417
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 223/387 (57%), Gaps = 9/387 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ ++I + + ++I +F EM L+ D +T+ V+ ACG + + G VH+ I
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ + ++ + L+ MY CK I A+AVF++M ++VVSW++M+ G+ +A+
Sbjct: 302 IRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K F M+ P+ TL S++S+C +L ++ G H+ A+ +GL + + ALV +Y
Sbjct: 362 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 421
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG +E + ++FN + K+ +WT ++SG A G+ N I LF M+ GLKPD ++F
Sbjct: 422 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 481
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LSACS GLV++G F+ M + I P +HY CM+D+ RAG IEEA + I MP
Sbjct: 482 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 541
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNWD 423
P+A+ + L +CR +G + ++GK L++L+P A+YVL +SV + G W+
Sbjct: 542 SPDAISWATLLSSCRFYGNM-----DIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWE 596
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
A L + KGL K PGCSW+K +
Sbjct: 597 EVARLRKDMRDKGLRKEPGCSWIKYKN 623
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 35/343 (10%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT--GLRPDNFTYPFVVKACGR 113
LF+ +P + ++N+LI YA +S+K ++ MLK + T+ ++ +
Sbjct: 97 LFDAMPRRDGV-SWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASK 155
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--------- 164
+ +G +H + K G S ++G+ L+ MY+ I A+ VF+E+P
Sbjct: 156 RGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTL 215
Query: 165 ----------------------RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
RD +SW+SMI GF DA+ +F MKL N +
Sbjct: 216 IMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQ 275
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T S+++AC ++ ++ G+ +H+Y + + ++ + +ALV+MY KC +++ A VF
Sbjct: 276 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKK 335
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M KN+ SWT M+ G NG A+ F+ M + G++PD + +++S+C++L ++EG
Sbjct: 336 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F A + + +V + G+ G IE+++ + +
Sbjct: 396 AQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI 437
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 142/344 (41%), Gaps = 76/344 (22%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+ LP P F N LI +YAK + K+FD+M L
Sbjct: 35 IIKTLPY-PETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL------------------ 75
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
Y NT+L Y+ + + +F+ MP RD VSW+S+I+
Sbjct: 76 ---------------------YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLIS 114
Query: 176 GFVACDSPSDALKVFHRMKLANESP---NSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
G+ C ++K ++ M L N+ N +T +L+ + V+ G IH + V G
Sbjct: 115 GYAGCGLIYQSVKAYNLM-LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFG 173
Query: 233 LELDVALGTALVEMYSK-------------------------------CGHVEKAFKVFN 261
V +G+ LV+MYSK CG VE + ++F
Sbjct: 174 FMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFF 233
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
MRE++ SWT MI+G NG AI +F +M L+ D +F ++L+AC + + E
Sbjct: 234 EMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQE 293
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
GK + R + K + +VDM + I+ A + + M
Sbjct: 294 GKQVHAYIIRT-DYKDNIFVASALVDMYCKCKNIKSAEAVFKKM 336
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 249/445 (55%), Gaps = 20/445 (4%)
Query: 18 HLHQLHTLFLKTSLDH--NTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIR 74
L QLH ++T+ H NT + IL S+ L + +F+ + P F +N LIR
Sbjct: 41 QLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIE-NPNSFMWNALIR 99
Query: 75 AYAK-TSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
A A+ T +I L+ ML+ G + D T+PFV+KAC + G +H+ I K+G
Sbjct: 100 ACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGF 159
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSB YI N+L+ YA C +D AK VF+ M R +VSW+ +I FV AL +F
Sbjct: 160 DSBVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGE 219
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-------VNGLELDVALGTALVE 245
M+ E P+ T+ S+ +AC + ++ G H + + VN DV L T+LV+
Sbjct: 220 MQKFFE-PDGYTIQSIANACAGMGSLSLGMWAHVFLLKKXDADRVN----DVLLNTSLVD 274
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSI 304
MY KCG +E A ++F+ M ++++ SW MI G + +G A+ F M++T L P++I
Sbjct: 275 MYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAI 334
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +LSAC+H GLV EG+ YFD M Y IKP +EHYGC+VD+L RAGLI+EA ++ N
Sbjct: 335 TFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSN 394
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN-YVLAASVSSLSGNWD 423
MP P+ VI RS L AC + L + + +L+ E + + YVL + V + + W+
Sbjct: 395 MPMRPDLVIWRSLLDACCKQNAGVELSEEMASRVLEAEGGVCSGVYVLLSRVYASASRWN 454
Query: 424 TAAELMVAINQKGLNKVPGCSWVKV 448
+ + KG+ K PGCS +++
Sbjct: 455 DVGMVRKLMTDKGVVKEPGCSSIEI 479
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 248/430 (57%), Gaps = 5/430 (1%)
Query: 23 HTLFLKTSL-DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H L K L DH+ + S + S R +F+ + + ++N++++AY +
Sbjct: 140 HALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGIS-HRDVVSWNSMVKAYERAGM 198
Query: 82 SIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E + M+ G + P+ T V+ AC + +G V + G++ D IG+
Sbjct: 199 VAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGS 258
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C E+ A+ VF+ + +DVV+W++MI G+ ++A+ +FH M+ A P
Sbjct: 259 ALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCP 318
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TLV ++S+C ++ ++ G + +YA+ GL +V +GTALV+MY+KCG +EKA VF
Sbjct: 319 DKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVF 378
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLV 319
M KN SW +I GLA NGRG AI F M + GL+PD I+F +LSAC H GL+
Sbjct: 379 GKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLL 438
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+ G+ F+ + V+ I P +EHY C+VD+L RAG +EEA+ I MP + +AV+L + L
Sbjct: 439 EYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHLEEAWDFIEEMPGKVDAVMLGALLA 498
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR + + + ++KLEP NYV+++ + + S D +A ++ + ++G+NK
Sbjct: 499 ACRKCKNT-EVGERVINRIMKLEPSNSWNYVVSSKIYATSDKMDESARMIGLMRERGVNK 557
Query: 440 VPGCSWVKVN 449
PGCSWV+VN
Sbjct: 558 TPGCSWVEVN 567
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 168/312 (53%), Gaps = 5/312 (1%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR--PDNFTYPFVVKACGRCLLIGIG 120
P F YN IR +A +S S++LF ML+ +R PD +T PF++ A RC +
Sbjct: 78 APTAFTYNVTIRLFA-SSRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALA 136
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
S H+L+ K+GL + ++L+ MY+ + A+ VF+ + RDVVSW+SM+ +
Sbjct: 137 RSAHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERA 196
Query: 181 DSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
++ + M +PN VTL +++AC N+ G + + G+E+D +
Sbjct: 197 GMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLI 256
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G+ALV MY KCG + +A +VF+ +R K++ +W MI+G A NG N AI+LF M + GL
Sbjct: 257 GSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGL 316
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
PD I+ +LS+C+ +G + G D A + + +VDM + G +E+A
Sbjct: 317 CPDKITLVGVLSSCAAVGALKLGVE-LDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKAT 375
Query: 360 HIIRNMPTEPNA 371
H+ MP + A
Sbjct: 376 HVFGKMPFKNEA 387
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 252/428 (58%), Gaps = 34/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
T+ L + PV + ++ +LI AY++ + + E++ F ML G+ PD T V+ AC
Sbjct: 192 TQLLLSQAPVRD-VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACA 250
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE--------------------- 151
+ + +G S+H L+ + G+ + + + L+ MYA C +
Sbjct: 251 KLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWN 310
Query: 152 -----------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+DVA+++F+EM VRD+++++SM+ G++ +AL +F M+ +
Sbjct: 311 AIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRV 370
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ T+V+L++AC SL ++ G ++H+ +E D+ LGTAL++MY KCG V++A VF
Sbjct: 371 DNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVF 430
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M ++++ +WT MI+GLA NG G A+ F +M G +P+S+S+ A+L+ACSH L++
Sbjct: 431 QRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLN 490
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+ YFDEM +YNI P +EHYGCM+D+LGR+GL++EA +++ MP +PNAVI S L A
Sbjct: 491 EGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA 550
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR H + L + LLKLEP+ YV ++ S W+ A+++ + + ++ + K
Sbjct: 551 CRVHKHI-DLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKT 609
Query: 441 PGCSWVKV 448
G S + V
Sbjct: 610 AGYSSITV 617
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 39 SRFILTSL-------SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT-SCSIESIKLFD 90
+R +L SL + L + LF+ +P P F ++T +RA ++ S LF
Sbjct: 35 ARHLLNSLVNCLEPHPLHLRYALHLFDRMP--PSTFLFDTALRACSRAGSDPHRPFLLFR 92
Query: 91 EMLKTGLRPDNFTYPFVVKACG---RCLLIGIGGSVHSLIFKVGLDSD-KYIGNTLLRMY 146
M + G+RPD FT+ F+ K R + + +H+ + L S ++ N+L+ MY
Sbjct: 93 RMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMY 152
Query: 147 ----------AACKEIDVAKAV---------------------FEEMPVRDVVSWSSMIA 175
A EI V AV + PVRDV+SW+S+IA
Sbjct: 153 IRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIA 212
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ + +A+ F M +P+ VT+++++SAC L ++ G S+H G+
Sbjct: 213 AYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPT 272
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
L AL++MY+KCG A +VF+ L R QSW +I G +G + A SLF +M
Sbjct: 273 SENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEM 332
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
D I+F+++++ H G + E F M R
Sbjct: 333 EVR----DIITFNSMMTGYIHSGQLREALLLFMSMRR 365
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 231/401 (57%), Gaps = 3/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVV 108
L + R +FN + + ++ +I Y +++ L+D+ML GL P T ++
Sbjct: 261 LFYARKIFNTVNKKNDV-CWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATML 319
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+AC + + G +H + K G+D D +GN+L+ MYA C +D A +EM +D V
Sbjct: 320 RACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTV 379
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
S+S++I+G V AL +F +M+ + +P T+++L+ AC+ L ++ G H Y
Sbjct: 380 SYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYT 439
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
VV G D ++ A+++MYSKCG + + ++F+ M+ +++ SW MI G +G A+
Sbjct: 440 VVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEAL 499
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
SLF ++ GLKPD ++ A+LSACSH GLV EGK +F M++ +NIKP M HY CMVD+
Sbjct: 500 SLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDL 559
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L RAG ++EAY I+ MP PN I + L ACR H + + + + K + L PE N
Sbjct: 560 LARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNI-EMGEQVSKKIQLLGPEGTGN 618
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+VL +++ S G WD AA + G K PGCSWV+++
Sbjct: 619 FVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEIS 659
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 177/340 (52%), Gaps = 8/340 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ R +F+ +P P + +N +IR YA + +SI L+ ML+ G+ P NFT+PF++K
Sbjct: 57 IQLARHVFDQIP-KPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM--PVRDV 167
AC + +G +H+ +GL D Y+ LL MYA C + A+ +F + RD+
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
V+W++MIA F + + +M+ A +PNS TLVS++ + G++IH+Y
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ N +V L TAL++MY+KC + A K+FN + +KN W+ MI G + + A
Sbjct: 236 YIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDA 295
Query: 288 ISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCM 345
++L+ M+ GL P + + +L AC+ L + GK M + ++ T+ +
Sbjct: 296 LALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG--NSL 353
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ M + G+++ A + M + + V + + C +G
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNG 392
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
DSD L R + + EI +A+ VF+++P VV W+ MI + ++ ++
Sbjct: 39 DSDA-AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M +P + T L+ AC+SL ++ G IH++A + GL +D+ + TAL+ MY+KCGH
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157
Query: 253 VEKAFKVFNLM--REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+ +A +FN + +++++ +W MI+ + + I A+M Q G+ P+S + +IL
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Query: 311 SACSHLGLVDEGK 323
+ +GK
Sbjct: 218 PTIGQANALHQGK 230
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 231/400 (57%), Gaps = 11/400 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + V ++N++I YA E+++LF ML G RP+ T + C +
Sbjct: 171 RRLFDGM-VRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAK 229
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G SLI + L + + L+ MY C+ ID A+ F+ M RDVV+WS+M
Sbjct: 230 TGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTM 288
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ P ++L++F RMK + PN VTLV ++SAC L + G I S+ L
Sbjct: 289 IAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNL 348
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
L LG+AL++MY+KCGHV +A VFN M K + +W M+ GLA NG AI+L+ +
Sbjct: 349 PLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKE 408
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + ++P+ I+F A+L+AC+H GLVD+G ++F EM ++++ P +EH C+VD+L ++G
Sbjct: 409 MTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSG 468
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+ EAY I +M EPNAVI + L ACR H V L KL LL LEP+ + Y
Sbjct: 469 RLREAYKFICDMEVEPNAVIWSTLLSACRAHADV-----ELAKLAASKLLVLEPDNSSIY 523
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
VL +++ + +G W E+ + K + K+ SW++++
Sbjct: 524 VLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELD 563
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 42/379 (11%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
HL Q LKT H+ +L+ S S R LF+ +P P TLI A +
Sbjct: 11 HLPQHLAGLLKTRPLHD-------LLSDASTS-RAARHLFDAVPRPTPALC-GTLISALS 61
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ E + F + + G P VVK+C G VH GL D +
Sbjct: 62 RLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIF 121
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----------------------------- 168
+ L+ YA ++D A VF+EMPV+D +
Sbjct: 122 VQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRT 181
Query: 169 --SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
SW+SMIA + +AL++F RM PN++T+ ++ S C ++ G+ S
Sbjct: 182 SASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARS 241
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
L+ ++ + TAL+EMY KC +++A + F+ M+++++ +W+ MI+G A NGR +
Sbjct: 242 LIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHE 300
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
++ LF +M T KP+ ++ +LSAC+ LG DE N+ T ++
Sbjct: 301 SLELFERMKATSCKPNEVTLVGVLSACAQLG-SDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 347 DMLGRAGLIEEAYHIIRNM 365
DM + G + A + M
Sbjct: 360 DMYTKCGHVGRARSVFNRM 378
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 230/397 (57%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
LF+N+P + ++ T+I + E++ F EM G D FT+ V+ ACG
Sbjct: 224 EQLFDNMPEKDSI-SWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG 282
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L + G +H+ I + + ++G+ LL MY C+ + A+AVF +M ++V+SW++M
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ G+ +A+++F M+ P+ TL S++S+C +L ++ G H A+ +GL
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
V + AL+ +Y KCG +E A ++F+ M+ ++ SWT ++SG A G+ N ISLF
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFET 462
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M+ G+ PD ++F +LSACS GLV++G +YF+ M + + I P +HY CM+D+L RAG
Sbjct: 463 MLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAG 522
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEA + I MP P+A+ + L +CR +G L + + L KLEP+ A+Y+L +
Sbjct: 523 RLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN-LEIGKWAAESLHKLEPQNPASYILLS 581
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
S+ + G WD A+L + + G+ K PG SW+K +
Sbjct: 582 SIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKN 618
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 66/412 (16%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
+ +LH ++T + T + + I T + L R++F+++P P LF++NTL+ AY
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP-QPNLFSWNTLLSAY 81
Query: 77 AK-------------------------------TSCSIESIKLFDEMLKTG-LRPDNFTY 104
+K ES+++++ MLK G + + T+
Sbjct: 82 SKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
++ + +G +H IFK G S ++G+ L+ MYA I+ A +FEE+P
Sbjct: 142 STMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPE 201
Query: 165 RDVVSWSSMIAGFVAC----------------DSPS---------------DALKVFHRM 193
+++V +++MI G + C DS S +A+ F M
Sbjct: 202 KNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEM 261
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ + T S+++AC + + G+ IH+Y + + ++ +G+AL++MY KC +V
Sbjct: 262 GIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNV 321
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ A VF MR KN+ SWT M+ G NG A+ +F M + + PD + +++S+C
Sbjct: 322 KYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSC 381
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++L ++EG F A + + ++ + G+ G +E A+ + M
Sbjct: 382 ANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEM 432
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 258/450 (57%), Gaps = 6/450 (1%)
Query: 6 IETLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLP 61
I T+I + LHQ +H +K L N+ I + + + L R +F+ L
Sbjct: 269 IATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELS 328
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
L + T+I Y + +++++LF + + P++ T V+ A + + +G
Sbjct: 329 YID-LVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGK 387
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
S+H L K+GL +GN L+ MYA C+ + A +F + +DVV+W+SMI+G+ +
Sbjct: 388 SIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENN 447
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
DAL +F +M L SP+++++V+ +SA L ++ G+SIH YAV + ++ + T
Sbjct: 448 MGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDT 507
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL+ +Y+KCG + A +VF+ M ++N +W MI G G +I LF +M++ G+ P
Sbjct: 508 ALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYP 567
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F++ILS CSH G+V GK YFD MA+ +NI P+M+HY CMVD+L RAG +E+A
Sbjct: 568 NDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEF 627
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I NMP + + + +FL C H ++ + ++ + ++++ L PE YVL +++ + +G
Sbjct: 628 IDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMV-LHPERPDLYVLISNLYTSNGM 686
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
WD + + + +KGL K+PGCS V +G
Sbjct: 687 WDKSLAIRRWMQEKGLVKLPGCSSVGHENG 716
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 7/290 (2%)
Query: 41 FILTSL------SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
F++ SL + L R +F +P + ++ ++I + + + + LF++M +
Sbjct: 201 FVMNSLVDMYAKAEDLECARKVFERIP-DRNVVSWTSMISGCVQNGFASDGLLLFNKMRQ 259
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
+ P +T V+ AC + G +H + K GL S+ +I LL MY C E+D
Sbjct: 260 DNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDH 319
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ VF+E+ D+V W++MI G+ +P DAL++F + AN +PNSVT +++SA
Sbjct: 320 ARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQ 379
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L ++ G+SIH AV GL +G ALV+MY+KC V +A ++F + K++ +W M
Sbjct: 380 LRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSM 439
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
ISG A+N G+ A+ LF +M G PD+IS LSA LG + GK+
Sbjct: 440 ISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKS 489
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 14/317 (4%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP---DNFTYPFVVK 109
R +F+ P P ++Y ++ +T +++ L +M + P D+F +K
Sbjct: 116 ARMVFDGTP-RPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALK 174
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC R G S+H KVG +D ++ N+L+ MYA ++++ A+ VFE +P R+VVS
Sbjct: 175 ACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVS 233
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+SMI+G V SD L +F++M+ N P+ T+ ++++AC++L + G +H +
Sbjct: 234 WTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVI 293
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
GL + + AL++MY KCG ++ A VF+ + +L WT MI G NG A+
Sbjct: 294 KQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALR 353
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV----YNIKPTMEHYGCM 345
LF + P+S++ + +LSA + L + GK+ ++ YN+ +
Sbjct: 354 LFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGN-----AL 408
Query: 346 VDMLGRAGLIEEAYHII 362
VDM + + EA I
Sbjct: 409 VDMYAKCQAVSEADRIF 425
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP- 200
LL YAA ++ A+ VF+ P D S+ +M+ V + +DA+ + H M+ P
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 201 --NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ L + AC G S+H A+ G D + +LV+MY+K +E A K
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARK 221
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF + ++N+ SWT MISG NG + + LF KM Q + P + + +++ACS L
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281
Query: 319 VDEGK 323
+ +G+
Sbjct: 282 LHQGR 286
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 238/440 (54%), Gaps = 9/440 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIRAYA 77
+ ++H L K L+ + I S + L L + F LP+ + +N ++ YA
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVL-WNAMVNGYA 213
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ ++ F M + P FT V+ + G +H K+G DS
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L+ MY CK I+ A +FE M +D+ SW+S+++ C L++ RM A
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD------VALGTALVEMYSKCG 251
P+ VT+ +++ AC+ L + G IH Y +V+GL D V L A+++MY+KCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A VF M K++ SW IMI G +G GN A+ +F++M + LKPD ++F +LS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G V +G+N+ +M Y++ PT+EHY C++DMLGRAG ++EAY + MP E N
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
V+ R+ L ACR H + L + + + +LEPE +YVL ++V G ++ E+
Sbjct: 514 VVWRALLAACRLHKHAV-LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 432 INQKGLNKVPGCSWVKVNDG 451
+ Q+ + K PGCSW+++ +G
Sbjct: 573 MRQQNVRKTPGCSWIELKNG 592
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 163/302 (53%), Gaps = 14/302 (4%)
Query: 33 HNTCIISRFILTSLSIS-----------LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H+ +I+ F+ + LSI+ ++F S+F++ +FA+N +I +
Sbjct: 60 HSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGF 119
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
E + + +M G+ PD FT+P +KAC L I +H L+FK GL+ D +IG+
Sbjct: 120 PEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSA 176
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
L+ Y ++ A+ FEE+P+RDVV W++M+ G+ L+ F RM + P+
Sbjct: 177 LVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPS 236
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
T+ ++S + ++ G IH +A+ G + VA+ +L++MY KC +E A ++F
Sbjct: 237 RFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFE 296
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+MREK++ SW ++S G + + L +M+ G++PD ++ + +L ACSHL +
Sbjct: 297 MMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 322 GK 323
G+
Sbjct: 357 GR 358
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 15/292 (5%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGF 177
G +HS + G + +L+ MY+ C +++ A ++F + P + V +++++I+GF
Sbjct: 56 GKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGF 114
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+ P + + + +M+ P+ T + AC ++ ++ IH GLELDV
Sbjct: 115 ITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDV 171
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G+ALV Y K G +E A F + +++ W M++G A G+ + F +M
Sbjct: 172 FIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDE 231
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+ P + + +LS + +G ++ G+ A + ++DM G+ IE+
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGR-IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIED 290
Query: 358 AYHIIRNMPTEP----NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
A I M + N+++ S C +H L L D + L ++P+L
Sbjct: 291 ALEIFEMMREKDIFSWNSIV--SVHEQCGDHDGTLRLLDRM--LGAGIQPDL 338
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG-TALVEMYSKCGHVEKAFKV 259
N T ++ + A N+ G+ IHSY ++NG L+ L T+L+ MYSKC + A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 260 F-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
F + E N+ ++ +ISG NG + KM G+ PD +F + AC
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC 149
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 231/400 (57%), Gaps = 11/400 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + V ++N++I YA E+++LF ML G RP+ T + C +
Sbjct: 171 RRLFDGM-VRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAK 229
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G SLI + L + + L+ MY C+ ID A+ F+ M RDVV+WS+M
Sbjct: 230 TGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTM 288
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ P ++L++F RMK + PN VTLV ++SAC L + G I S+ L
Sbjct: 289 IAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNL 348
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
L LG+AL++MY+KCGHV +A VFN M K + +W M+ GLA NG AI+L+ +
Sbjct: 349 PLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKE 408
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + ++P+ I+F A+L+AC+H GLVD+G ++F EM ++++ P +EH C+VD+L ++G
Sbjct: 409 MTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSG 468
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+ EAY I +M EPNAVI + L ACR H V L KL LL LEP+ + Y
Sbjct: 469 RLREAYKFICDMEVEPNAVIWSTLLSACRAHADV-----ELAKLAASKLLVLEPDNSSIY 523
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
VL +++ + +G W E+ + K + K+ SW++++
Sbjct: 524 VLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELD 563
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 42/379 (11%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
HL Q LKT H+ +L+ S S R LF+ +P P TLI A +
Sbjct: 11 HLPQHLAGLLKTRPLHD-------LLSDASTS-RAARHLFDAVPRPTPALC-GTLISALS 61
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ E + F + + G P VVK+C G VH GL D +
Sbjct: 62 RLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIF 121
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVV----------------------------- 168
+ L+ YA ++D A VF+EMPV+D +
Sbjct: 122 VQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRT 181
Query: 169 --SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
SW+SMIA + +AL++F RM PN++T+ ++ S C ++ G+ S
Sbjct: 182 SASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARS 241
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
L+ ++ + TAL+EMY KC +++A + F+ M+++++ +W+ MI+G A NGR +
Sbjct: 242 LIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHE 300
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
++ LF +M T KP+ ++ +LSAC+ LG DE N+ T ++
Sbjct: 301 SLELFERMKATSCKPNEVTLVGVLSACAQLG-SDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 347 DMLGRAGLIEEAYHIIRNM 365
DM + G + A + M
Sbjct: 360 DMYTKCGHVGRARSVFNRM 378
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 251/471 (53%), Gaps = 39/471 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L Q+H +KT L +T SR F S S ++ +F + P F +NT
Sbjct: 37 TMRELKQIHANLIKTGLISDTVAASRVLAFCCASPS-DRNYAYLVFTRINHKNP-FVWNT 94
Query: 72 LIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+IR ++++S +I +F +ML ++P TYP V KA L G +H + K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIK 154
Query: 130 VGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAV 158
GL+ D +I NT+L MY A C ID A+ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKL 214
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+EMP R+ VSW+SMI+GFV DAL++F M+ + P+ T+VSL++AC L
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGAS 274
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G IH Y V N EL+ + TAL++MY KCG E+ KVF K L W MI GL
Sbjct: 275 EQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGL 334
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A+NG A+ LF ++ +TGL+PDS+SF +L+AC+H G V + +F M Y I+P+
Sbjct: 335 ANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPS 394
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
++HY CMV++LG AGL++EA +I+ MP E + +I S L ACR +G V + L
Sbjct: 395 IKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNV-EMAKRAANCL 453
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L+P+ YVL ++ + G ++ A E + + ++ + K GCS ++V+
Sbjct: 454 KNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 40/213 (18%)
Query: 210 SACTSLINVRAG-----ESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLM 263
+ C LI+ R + IH+ + GL D VA L + A+ VF +
Sbjct: 25 NTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRI 84
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDE 321
KN W +I G + + AIS+F M+ +KP +++ ++ A + LGL +
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARD 144
Query: 322 GKNYFDEMARV-----YNIKPTMEHY----GCMVDM---------------------LGR 351
G+ + + I+ TM H GC+V+ L +
Sbjct: 145 GRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAK 204
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFL-GACRN 383
GLI++A + MP + N V S + G RN
Sbjct: 205 CGLIDQAQKLFDEMP-QRNGVSWNSMISGFVRN 236
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 10/402 (2%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+R LF ++ + ++ +I + + E+I LF EM L D +T+ V+ ACG
Sbjct: 227 SRQLFYDMQEKDSI-SWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACG 285
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + G VH+ I + + ++G+ L+ MY CK I A+ VF +M ++VVSW++
Sbjct: 286 GVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTA 345
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
M+ G+ +A+K+F M+ P+ TL S++S+C +L ++ G H A+V+G
Sbjct: 346 MLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 405
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L + + ALV +Y KCG +E + ++F+ M + SWT ++SG A G+ N + LF
Sbjct: 406 LISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFE 465
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M+ G KPD ++F +LSACS GLV +G F+ M + + I P +HY CM+D+ RA
Sbjct: 466 SMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRA 525
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGAN 408
G +EEA I MP P+A+ S L +CR H + +GK LLKLEP A+
Sbjct: 526 GRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNM-----EIGKWAAESLLKLEPHNTAS 580
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L +S+ + G W+ A L + KGL K PGCSW+K +
Sbjct: 581 YILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKN 622
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 173/344 (50%), Gaps = 38/344 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG---LRPDNFTYPFVVKACG 112
+F+ +P T + ++N+LI AYA ++S+K ++ ML G L + ++ +
Sbjct: 97 VFHAMP-TRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQ 155
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV---- 168
C+ +G+ VH + K G S ++G+ L+ MY+ + A+ F+EMP ++VV
Sbjct: 156 GCVHLGL--QVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNT 213
Query: 169 ---------------------------SWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
SW++MIAGF +A+ +F M+L N +
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
T S+++AC ++ ++ G+ +H+Y + + ++ +G+ALV+MY KC ++ A VF
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFR 333
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M KN+ SWT M+ G NG A+ +F M G++PD + +++S+C++L ++E
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
G F A V + + +V + G+ G IE+++ + M
Sbjct: 394 GAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 152/373 (40%), Gaps = 79/373 (21%)
Query: 26 FLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIES 85
F SL ++ C + + + I H ++ N P +F N L+ AYAK +
Sbjct: 9 FNSMSLSNHYCELLKHCRDTKKIHCHIIKAFRN-----PEIFLLNNLVSAYAKFDRITYA 63
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++FD+M + L Y NTLL
Sbjct: 64 RRVFDQMPQRNL---------------------------------------YSWNTLLSS 84
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE--SPNSV 203
Y+ + + VF MP RD+VSW+S+I+ + ++K ++ M L N + N +
Sbjct: 85 YSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLM-LYNGPFNLNRI 143
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK-------------- 249
L +++ + V G +H + V G + V +G+ LV+MYSK
Sbjct: 144 ALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEM 203
Query: 250 -----------------CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
C +E + ++F M+EK+ SWT MI+G NG AI LF
Sbjct: 204 PEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFR 263
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M L+ D +F ++L+AC + + EGK + R + + + +VDM +
Sbjct: 264 EMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYQDNIFVGSALVDMYCKC 322
Query: 353 GLIEEAYHIIRNM 365
I+ A + R M
Sbjct: 323 KSIKSAETVFRKM 335
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 224/379 (59%), Gaps = 1/379 (0%)
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + +++++F +L+ + P+ T V+ AC + +G +H+ I K
Sbjct: 245 AIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GLD +++G+ ++ MYA C +D+A +F MP +D V W+++I P +A+ +F
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+M S + V++ + +SAC +L + G++IHS+ + + +V +AL++MY KC
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC 424
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G++ A VF++MREKN SW +I+ +G +++LF KM++ G++PD ++F IL
Sbjct: 425 GNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
SAC H G VD+G YF M Y I MEHY C+VD+ GRAG + EA+ I+NMP P+
Sbjct: 485 SACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPD 544
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
+ + LGACR HG V L + + LL L+PE YVL ++V + +G W + ++
Sbjct: 545 DGVWGTLLGACRVHGNV-ELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRS 603
Query: 431 AINQKGLNKVPGCSWVKVN 449
+ ++G+ KVPG SW++VN
Sbjct: 604 LMKKRGVQKVPGYSWIEVN 622
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 195/370 (52%), Gaps = 6/370 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+QLH L + + + + + + S L LFN +P T + +N +I + +
Sbjct: 93 NQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTN-VVTWNGMIAGFVQ 151
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+ LF EM+ G+ PD+ T+ + + + G +H I + G+ D ++
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+ L+ +Y C+++ +A +F++ D+V +++I+G+V +DAL++F +
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
SPN+VTL S++ AC L + G+ +H+ + +GL+ +G+A+++MY+KCG ++ A++
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ 331
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F M EK+ W +I+ + NG+ AI LF +M + GL D +S SA LSAC++L
Sbjct: 332 IFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPA 391
Query: 319 VDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+ GK M + ++ + E ++DM G+ G + A + +M E N V S
Sbjct: 392 LHHGKAIHSFMIKGAFDSEVFAE--SALIDMYGKCGNLSVA-RCVFDMMREKNEVSWNSI 448
Query: 378 LGACRNHGQV 387
+ A +HG +
Sbjct: 449 IAAYGSHGHL 458
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 172/334 (51%), Gaps = 3/334 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ +P +N ++ + K ++K+F++M +P++ T+ V+ C
Sbjct: 26 ARRLFDKMP-NKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICA 84
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
L G +H L+ G D + N L+ MY+ ++ A +F MP +VV+W+
Sbjct: 85 SEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNG 144
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MIAGFV +A +F M A SP+S+T S + + T +++ G+ IH Y + +G
Sbjct: 145 MIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHG 204
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ LDV L +AL+++Y KC V A K+F ++ T +ISG NG N A+ +F
Sbjct: 205 IALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFR 264
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+++ + P++++ +++L AC+ L ++ GK + + + + ++DM +
Sbjct: 265 WLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK-HGLDERRHVGSAIMDMYAKC 323
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G ++ AY I R MP E +AV + + C +G+
Sbjct: 324 GRLDLAYQIFRRMP-EKDAVCWNAIITNCSQNGK 356
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 150/302 (49%), Gaps = 38/302 (12%)
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G + D+++G++L+++YA I+ A+ +F++MP +D V W+ M+ GFV C P+ A+KV
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M+ PNS+T S++S C S G +H + G D + ALV MYSK
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
G + A K+FN M + N+ +W MI+G NG + A LF++MI G+ PDSI+F++
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 310 LSACSHLGLVDEGKN-----------------------YFD----EMA-RVYNIKPTMEH 341
L + + + +GK YF MA +++ ++
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 342 YGCMVDMLGRA--GLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQVLYLDDNLGK 396
C + G GL +A I R + E PNAV L S L AC + NLGK
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATL-----NLGK 295
Query: 397 LL 398
L
Sbjct: 296 EL 297
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 228/387 (58%), Gaps = 1/387 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
V + +++TLI Y++ ES KL+ M+ GL + V+ A G+ L+ G
Sbjct: 295 VYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGK 354
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H+ + K GL SD +G+ L+ MYA C I A+++FE +D++ W+SMI G+
Sbjct: 355 EMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVG 414
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A F R+ A PN +T+VS++ CT + +R G+ IH Y +GL L+V++G
Sbjct: 415 DFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN 474
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L++MYSKCG +E KVF M +N+ ++ MIS +G+G ++ + +M + G +P
Sbjct: 475 SLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRP 534
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++F ++LSACSH GL+D G ++ M Y I+P MEHY CMVD++GRAG ++ AY
Sbjct: 535 NKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKF 594
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP P+A + S LGACR H +V L + L + +L+L+ + +YVL +++ +
Sbjct: 595 ITRMPMTPDANVFGSLLGACRLHNKV-ELTELLAERILQLKADDSGHYVLLSNLYASGKR 653
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ +++ I KGL K PG SW++V
Sbjct: 654 WEDMSKVRSMIKDKGLEKKPGSSWIQV 680
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 167/314 (53%), Gaps = 8/314 (2%)
Query: 16 VHHLHQLHTL-----FLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAY 69
+H LH L F + + H++ S+ + ++ SL F LP P+ A+
Sbjct: 43 LHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALP-HKPIIAW 101
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N ++R ++I + ML+ G+ PDN+TYP V+KAC + +G VH +
Sbjct: 102 NAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHG 161
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
++ Y+ ++ M+A C ++ A+ +FEEMP RD+ SW+++I G + +AL +
Sbjct: 162 -KTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLL 220
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M+ P+SV + S++ AC L V+ G ++ AV +G E D+ + A+++MY K
Sbjct: 221 FRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCK 280
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG +A +VF+ M ++ SW+ +I+G + N + L+ MI GL ++I +++
Sbjct: 281 CGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSV 340
Query: 310 LSACSHLGLVDEGK 323
L A L L+ +GK
Sbjct: 341 LPALGKLELLKQGK 354
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 9/341 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F +P L ++ LI +E++ LF +M GL PD+ ++
Sbjct: 182 SVEDARRMFEEMP-DRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASIL 240
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
ACGR + +G ++ + G +SD Y+ N ++ MY C + A VF M DVV
Sbjct: 241 PACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVV 300
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SWS++IAG+ ++ K++ M + N++ S++ A L ++ G+ +H++
Sbjct: 301 SWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFV 360
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ GL DV +G+AL+ MY+ CG +++A +F +K++ W MI G G A
Sbjct: 361 LKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAF 420
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEMARVYNIKPTMEHYGCM 345
F ++ +P+ I+ +IL C+ +G + +GK Y + N+ +
Sbjct: 421 FTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVG----NSL 476
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+DM + G +E + + M N + + AC +HGQ
Sbjct: 477 IDMYSKCGFLELGEKVFKQMMVR-NVTTYNTMISACGSHGQ 516
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 217 NVRAGESIHSYAVVNGL-----ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
N+ ++H+ +V G + + LV +Y G ++ AF F + K + +W
Sbjct: 42 NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAW 101
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
++ GL G AI + M+Q G+ PD+ ++ +L ACS L + G+ + M
Sbjct: 102 NAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHG 161
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
K + ++DM + G +E+A + MP
Sbjct: 162 --KTKANVYVQCAVIDMFAKCGSVEDARRMFEEMP 194
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 242/435 (55%), Gaps = 12/435 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L + L +T + ++ + L + + R LF+ +P +F +N LIRAYA+
Sbjct: 83 QLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN-VFLWNVLIRAYARE 141
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+++L+ M++ G+ PDNFTYP V+KAC L + G VH + D ++
Sbjct: 142 GPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVC 201
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
++ MYA C +D A+AVF+ + VRD V W+SMIA + P +AL + M
Sbjct: 202 AGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIG 261
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P TLVS VSA + G +H + G L L T+LV+MY+K G V+ A +
Sbjct: 262 PTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVL 321
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGL 318
F + ++ L SW MI G +G + A++LF KM + PD+I+F +LSAC+H G+
Sbjct: 322 FEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGM 381
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+E K +F M Y+IKPT++HY C++D+LG G EEAY +I+ M EP++ I + L
Sbjct: 382 VEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALL 441
Query: 379 GACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
C+ H V LG+L L++LEPE NYV +++ + SG W+ AA + +
Sbjct: 442 NGCKIHKNV-----ELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTN 496
Query: 435 KGLNKVPGCSWVKVN 449
+GL K+ CSW+++
Sbjct: 497 RGLKKILACSWIELK 511
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H + GL D + L+ +YAAC ++ A+ +F+ MP R+V W+ +I +
Sbjct: 81 GRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
A++++ M P++ T ++ AC +L+++ G +H DV +
Sbjct: 141 EGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFV 200
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+V+MY+KCG V+ A VF+ + ++ W MI+ NGR A++L M G+
Sbjct: 201 CAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGI 260
Query: 300 KP 301
P
Sbjct: 261 GP 262
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
S++ +C + ++RAG +H +V+GL D L T LV++Y+ CG V A ++F+ M ++
Sbjct: 67 SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF 326
N+ W ++I A G A+ L+ M++ G++PD+ ++ +L AC+ L ++ G+
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186
Query: 327 DEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
RV + + + C +VDM + G +++A + + +AV+ S + A +
Sbjct: 187 Q---RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAAYGQN 242
Query: 385 GQVL 388
G+ +
Sbjct: 243 GRPM 246
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 270/461 (58%), Gaps = 14/461 (3%)
Query: 14 KTVHHLHQLHTLFLKTSL-DHNTCII--SRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K + L Q+H L L+++L +H+T + SR + S L++ +F+ + P F +N
Sbjct: 33 KDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLHDLNYAYRVFDQVD-NPNSFMWN 91
Query: 71 TLIRAYAKTSC---SIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
LIRA A++ E+I L++ ML ++ PDN T+PFV+KAC + G H+
Sbjct: 92 ILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFEGKQAHAH 151
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K+G SD YI N+L+ YA+C ++ AK VF++MP R +VSW++MI FV A
Sbjct: 152 LLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETA 211
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLEL---DVALGTA 242
L++F + + P+ T+ S+++AC L + G H++ + N G+ + V + +
Sbjct: 212 LQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNS 271
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKP 301
L++MY KCG ++ A ++F M++ ++ SW MI G A +G+G A+ F +MI+ + P
Sbjct: 272 LLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVP 331
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+SI+F +LSAC+H +V+EG+ YFD M Y I+P +EHYGC+VD+L RAGLI+EA +
Sbjct: 332 NSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALEL 391
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP-ELGANYVLAASVSSLSG 420
+ +MP +P+ VI RS L +C + L +N+ + +L+ E + YVL + V + +
Sbjct: 392 VASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASAS 451
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
W+ + + G+ K PGCS ++V+ + E + +T+
Sbjct: 452 RWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTS 492
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 252/428 (58%), Gaps = 34/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
T+ L + PV + ++ +LI AY++ + + E++ F ML G+ PD T V+ AC
Sbjct: 192 TQLLLSQAPVRD-VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACA 250
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE--------------------- 151
+ + +G S+H L+ + G+ + + + L+ MYA C +
Sbjct: 251 KLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWN 310
Query: 152 -----------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+DVA+++F+EM VRD+++++SM+ G++ +AL +F M+ +
Sbjct: 311 AIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRV 370
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ T+V+L++AC SL ++ G ++H+ +E D+ LGTAL++MY KCG V++A VF
Sbjct: 371 DNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVF 430
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M ++++ +WT MI+GLA NG G A+ F +M G +P+S+S+ A+L+ACSH L++
Sbjct: 431 QRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLN 490
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+ YFDEM +YNI P +EHYGCM+D+LGR+GL++EA +++ MP +PNAVI S L A
Sbjct: 491 EGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA 550
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR H + L + LLKLEP+ YV ++ S W+ A+++ + + ++ + K
Sbjct: 551 CRVHKHI-DLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKT 609
Query: 441 PGCSWVKV 448
G S + V
Sbjct: 610 AGYSSITV 617
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 50/337 (14%)
Query: 39 SRFILTSL-------SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT-SCSIESIKLFD 90
+R +L SL + L + LF+ +P P F ++T +RA ++ S LF
Sbjct: 35 ARHLLNSLVNCLEPHPLHLRYALHLFDRMP--PSTFLFDTALRACSRAGSDPHRPFLLFR 92
Query: 91 EMLKTGLRPDNFTYPFVVKACG---RCLLIGIGGSVHSLIFKVGLDSD-KYIGNTLLRMY 146
M + G+RPD FT+ F+ K R + + +H+ + L S ++ N+L+ MY
Sbjct: 93 RMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMY 152
Query: 147 ----------AACKEIDVAKAV---------------------FEEMPVRDVVSWSSMIA 175
A EI V AV + PVRDV+SW+S+IA
Sbjct: 153 IRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIA 212
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ + +A+ F M +P+ VT+++++SAC L ++ G S+H G+
Sbjct: 213 AYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPT 272
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
L AL++MY+KCG A +VF+ L R QSW +I G +G + A SLF +M
Sbjct: 273 SENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEM 332
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
D I+F+++++ H G + E F M R
Sbjct: 333 EVR----DIITFNSMMTGYIHSGQLREALLLFMSMRR 365
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 249/442 (56%), Gaps = 12/442 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS-----LHFTRSLFNNLPVTPPLFAYNTLI 73
L QLH +K L + +++R + L + R +F+ + YNTL+
Sbjct: 41 LAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLL 100
Query: 74 RAYAKTSCSIES-----IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
R YA++S S S +++F ML+ G+ PD +T+ ++KAC G H++
Sbjct: 101 RGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAV 160
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G Y+ TL+ MYA C + A+ F VVS+++MIA V P +AL
Sbjct: 161 KLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALV 220
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ +P VT++S++SAC L ++ G +H Y GL V + TALV+MY+
Sbjct: 221 LFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYA 280
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A VF M ++ Q+W++MI A++G G AISLF +M + G+KPD I+F
Sbjct: 281 KCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLG 340
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L ACSH GLV EG YFD+M + + I P ++HYGC+ D+L R+G +E AY I +P
Sbjct: 341 LLYACSHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPIN 399
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P ++ R+ L AC HG V L + + +L+L+ G +YV+ +++ + +G W+ +
Sbjct: 400 PTPILWRTLLSACGGHGDV-ELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRV 458
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
++ KG+ KVPGCS +++++
Sbjct: 459 RKLMSDKGVVKVPGCSSIEIDN 480
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 271/522 (51%), Gaps = 81/522 (15%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSI--SLHFTRSLFNN 59
+R L Q K L Q+H + L N ++ I + SLS+ +L + LF
Sbjct: 12 NRRRSKLWQNCKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEE 71
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + N ++R A++ +++ L+ EM K G+ PD +T+ FV+KAC +
Sbjct: 72 IP-KPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------------- 151
G ++H + + G ++Y+ N L+ +A C +
Sbjct: 131 GFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK 190
Query: 152 ---IDVAKAVFEEMP-------------------------------VRDVVSWSSMIAGF 177
ID A +F+EMP +DVV+W++MI+G+
Sbjct: 191 RGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY-----AVVNG 232
V C P +AL +F M+ A E P+ VT++SL+SAC L ++ G+ +H Y +V +
Sbjct: 251 VNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + + AL++MY+KCG +++A +VF M++++L +W +I GLA + ++ +F
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEMFE 369
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + + P+ ++F ++ ACSH G VDEG+ YF M +YNI+P ++HYGCMVDMLGRA
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGAN 408
GL+EEA+ + +M EPNA++ R+ LGAC+ +G V LGK LL + + +
Sbjct: 430 GLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNV-----ELGKYANEKLLSMRKDESGD 484
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + +G WD ++ + + K G S ++ +D
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIEEDD 526
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 258/440 (58%), Gaps = 9/440 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTP----PLFAYNTLIRAY 76
Q H L LK SL ++ +++ I ++ S ++ S L P + ++NT+I Y
Sbjct: 114 QFHALSLKLSLASDSFVLNALI--NMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGY 171
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ ++++ F +M K +R D T V+ AC R + +G H+L+ G + +
Sbjct: 172 IRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINC 231
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
YIG++L+ MYA C ++ A+ VF MP R+VV W+SMIAG +A+ +F M++A
Sbjct: 232 YIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIA 291
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ T+ ++VS+C + + G +H+Y +GL ++++ +L++MYSKCG V KA
Sbjct: 292 GVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKA 351
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSH 315
+++F+ + ++++ +WT+MI G A NG A+ LFA+M + + P+ + F +L+ACSH
Sbjct: 352 YQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSH 411
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
GLV++G ++F M++VYN+ P +EHYGCMVD+LGRA L+ EA I++MP P+ V+ R
Sbjct: 412 GGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWR 471
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
S L ACR GQV L + + + +LEP+ +VL ++V + + W + +
Sbjct: 472 SLLFACRASGQV-GLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNS 530
Query: 436 GLNKVPGCSWVKVNDGSAEE 455
+K PGCS+++V DG E
Sbjct: 531 RTSKKPGCSFIEV-DGCIHE 549
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 181/344 (52%), Gaps = 8/344 (2%)
Query: 27 LKTSLDHNTCIISRFILTSLS---ISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSI 83
L++S N CI+S ++SLS + + +R+ + L + PL ++ L Y S+
Sbjct: 18 LRSSHTENKCILS-VPVSSLSHHHLPILLSRATVSGLLLKLPL-VHSVLRSLYLGPIPSL 75
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
L + DN++ + A R + +G H+L K+ L SD ++ N L+
Sbjct: 76 SFSFLSLLRRFANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALI 135
Query: 144 RMYAACKEIDVAKAVFEEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
MY++C A+ V + P DVVSW+++IAG++ P+ AL+ FH+M +
Sbjct: 136 NMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLD 195
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
VTL++++ AC ++ G H+ V+NG E++ +G++LV MY+KCG VE+A +VFN
Sbjct: 196 EVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFN 255
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M E+N+ WT MI+G +GR A+ LF M G+K D + + ++S+C +G +D
Sbjct: 256 RMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDL 315
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
G+ Y + + + ++DM + G + +AY I +
Sbjct: 316 GR-YLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGL 358
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 249/450 (55%), Gaps = 7/450 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
R I + KT L Q+H L+ L + I+S FI ++ +L +
Sbjct: 9 ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P L +N++I+ Y+ S S+ LF +M G+ PD FT+ ++K+C IG
Sbjct: 69 NPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKG 128
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD-----VVSWSSMIAGF 177
VH ++ VG + I ++ +Y +C ++ AK VF+EM RD VVSW+SMIAG
Sbjct: 129 VHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGL 188
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD- 236
+AL++F M P+ T+V+++ C L V GE IHSYA + L D
Sbjct: 189 EQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDF 248
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+++G +LV+ Y KCG +E A++VFN M +KN+ SW MISGL NG+G LF +MI
Sbjct: 249 ISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMIN 308
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G++P+ +F +LS C+H GLV+ G+N F M + ++P +EH+GCMVD+L R G +E
Sbjct: 309 KGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCME 368
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA ++R MP PNAV+ S L A R G V + + + K L++LEP NYVL ++V
Sbjct: 369 EARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAV-KELIELEPWNSGNYVLLSNVY 427
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ G WD ++ + +K + K PG S V
Sbjct: 428 AEDGKWDEVEKVRALMKEKNIRKNPGQSMV 457
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 246/475 (51%), Gaps = 53/475 (11%)
Query: 22 LHTLFLKTSLDHNTC----IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
++ L + N+C I+ FI + R F + +F +N ++ Y
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCG---RMDIARRFFEEIEF-KDVFMWNIMVSGYT 188
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDK 136
+++ +F +M+ G++P++ T V AC L+ G +H KV LDSD
Sbjct: 189 SKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 248
Query: 137 YIGNTLLRMYAACKEIDVAK---------------------------------------- 156
+GN+L+ YA C+ ++VA+
Sbjct: 249 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMH 308
Query: 157 ---AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+VF E+ RDVV W+S+I+ +AL + M L+N N+VT+VS + AC+
Sbjct: 309 IACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 368
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L +R G+ IH + + GL+ + +L++MY +CG ++K+ ++F+LM +++L SW +
Sbjct: 369 KLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNV 428
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
MIS +G G A++LF + GLKP+ I+F+ +LSACSH GL++EG YF M Y
Sbjct: 429 MISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEY 488
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
+ P +E Y CMVD+L RAG E I MP EPNA + S LGACR H L +
Sbjct: 489 AMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP-DLAEY 547
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ L +LEP+ NYVL A++ S +G W+ AA++ + ++G+ K PGCSW++V
Sbjct: 548 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 602
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 171/323 (52%), Gaps = 14/323 (4%)
Query: 8 TLIQLSKTVHHLH---QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVT 63
+++Q + +++L Q+H + +D + SR + + R +F+ +
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-E 73
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+F++ ++ Y E+IKLF M+ G+RPD+F +P V KAC +G V
Sbjct: 74 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ + +G + + + ++L M+ C +D+A+ FEE+ +DV W+ M++G+ +
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTA 242
AL VF +M L PNS+T+ S VSACT+L +R G IH Y + V L+ D+ +G +
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 253
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM--ISGLADNGRGNYAISLFAKM-----I 295
LV+ Y+KC VE A + F ++++ +L SW M ++G G G A+ F +M +
Sbjct: 254 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSV 313
Query: 296 QTGLKP-DSISFSAILSACSHLG 317
+ L D + +++I+SAC+ G
Sbjct: 314 FSELSTRDVVVWNSIISACAQSG 336
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 124/220 (56%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C + + +G VH+ + G+D +++G+ LL +Y ++ A+ +F++M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R+V SW++++ + + +K+F+ M P+ + AC+ L N R G+
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
++ Y + G E + + ++++M+ KCG ++ A + F + K++ W IM+SG G
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
A+++F KM+ G+KP+SI+ ++ +SAC++L L+ G+
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR 232
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M L N S++ C L N+R G +H+ VVNG+++ LG+ L+E+Y + G
Sbjct: 1 MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
VE A ++F+ M E+N+ SWT ++ G I LF M+ G++PD F + A
Sbjct: 61 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120
Query: 313 CSHLGLVDEGKNYFDEM----------------------ARVYNIKPTMEH--------Y 342
CS L GK+ +D M R+ + E +
Sbjct: 121 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 180
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRN-----HGQVLY 389
MV G ++A ++ R M E PN++ + S + AC N HG+ ++
Sbjct: 181 NIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 235
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 238/440 (54%), Gaps = 9/440 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIRAYA 77
+ ++H L K L+ + I S + L L + F LP+ + +N ++ YA
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVL-WNAMVNGYA 213
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ ++ F M + P FT V+ + G +H K+G DS
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L+ MY CK I+ A +FE M +D+ SW+S+++ C L++ RM A
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD------VALGTALVEMYSKCG 251
P+ VT+ +++ AC+ L + G IH Y +V+GL D V L A+++MY+KCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A VF M K++ SW IMI G +G GN A+ +F++M + LKPD ++F +LS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G V +G+N+ +M Y++ PT+EHY C++DMLGRAG ++EAY + MP E N
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
V+ R+ L ACR H + L + + + +LEPE +YVL ++V G ++ E+
Sbjct: 514 VVWRALLAACRLHKHAV-LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 432 INQKGLNKVPGCSWVKVNDG 451
+ Q+ + K PGCSW+++ +G
Sbjct: 573 MRQQNVRKTPGCSWIELKNG 592
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 163/302 (53%), Gaps = 14/302 (4%)
Query: 33 HNTCIISRFILTSLSIS-----------LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
H+ +I+ F+ + LSI+ ++F S+F++ +FA+N +I +
Sbjct: 60 HSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGF 119
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
E + + +M G+ PD FT+P +KAC L I +H L+FK GL+ D +IG+
Sbjct: 120 PEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSA 176
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
L+ Y ++ A+ FEE+P+RDVV W++M+ G+ L+ F RM + P+
Sbjct: 177 LVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPS 236
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
T+ ++S + ++ G IH +A+ G + VA+ +L++MY KC +E A ++F
Sbjct: 237 RFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFE 296
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+MREK++ SW ++S G + + L +M+ G++PD ++ + +L ACSHL +
Sbjct: 297 MMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 322 GK 323
G+
Sbjct: 357 GR 358
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 15/292 (5%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGF 177
G +HS + G + +L+ MY+ C +++ A ++F + P + V +++++I+GF
Sbjct: 56 GKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGF 114
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+ P + + + +M+ P+ T + AC ++ ++ IH GLELDV
Sbjct: 115 ITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDV 171
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+G+ALV Y K G +E A F + +++ W M++G A G+ + F +M
Sbjct: 172 FIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDE 231
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+ P + + +LS + +G ++ G+ A + ++DM G+ IE+
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGR-IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIED 290
Query: 358 AYHIIRNMPTEP----NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
A I M + N+++ S C +H L L D + L ++P+L
Sbjct: 291 ALEIFEMMREKDIFSWNSIV--SVHEQCGDHDGTLRLLDRM--LGAGIQPDL 338
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG-TALVEMYSKCGHVEKAFKV 259
N T ++ + A N+ G+ IHSY ++NG L+ L T+L+ MYSKC + A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 260 F-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
F + E N+ ++ +ISG NG + KM G+ PD +F + AC
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC 149
>gi|255641766|gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 252/447 (56%), Gaps = 8/447 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLF 67
L+ L KT ++ + H + + + I +R I S L R +F+NL P +F
Sbjct: 26 LLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLIDKYSHFSNLDHARKVFDNLS-EPDVF 84
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
N +I+ YA E++K+ D M G+ P+ +TYPFV+KACG G +H
Sbjct: 85 CCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHEHA 144
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G+D D ++GN L+ YA C++++V++ VF+E+P RD+VSW+SM++G+ DA+
Sbjct: 145 VKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMVSGYTVNGYVDDAI 204
Query: 188 KVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+F+ M L +ES P+ T V+++ A ++ AG IH Y V + LD A+GT L+
Sbjct: 205 LLFYDM-LRDESVGGPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTGLI 263
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+YS CG+V A +F+ + ++++ W+ +I +G A++LF +++ GL+PD +
Sbjct: 264 SLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGV 323
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
F +LSACSH GL+++G + F+ M Y + + HY C+VD+LGRAG +E+A I++
Sbjct: 324 VFLCLLSACSHAGLLEQGWHLFNAM-ETYGVAKSEAHYACIVDLLGRAGDLEKAVEFIQS 382
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP +P I + LGACR H + + L + + L L+P+ YV+ A + + W
Sbjct: 383 MPIQPGKNIYGALLGACRIH-KNMELAELAAEKLFVLDPDNAGRYVILAQMYEDAERWLD 441
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDG 451
AA + + K + K G S V++ G
Sbjct: 442 AARVRKVVKDKEIKKPIGYSSVELESG 468
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 268/509 (52%), Gaps = 69/509 (13%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI---LTSLSISLHFTRSLFNNLPVTP 64
+L+ + K++ Q+H LK L+ + I + + SLS SL + LF P P
Sbjct: 10 SLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTP-NP 68
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSV 123
+F +NTLIR ++ +S+ F EM + P D+F++ F+VKA + +G +
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQL 128
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE---------------------- 161
H GLD+ ++G TL+ MY C + A+ VF+E
Sbjct: 129 HCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDM 188
Query: 162 ---------MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-------------- 198
MPVR+++SW+ M+AG+ A ++F M + ++
Sbjct: 189 KGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNG 248
Query: 199 -----------------SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
PN +L ++SAC + G+ +H + +GL V++
Sbjct: 249 YFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNN 308
Query: 242 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL++ YSKCG+V A VF +M E+N+ SWT M++ LA +G G AI +F KM ++G++
Sbjct: 309 ALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIR 368
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD I+F ++L ACSH GLV++G YFD+M +YNI+P++EHYGCMVD+ GRAG +++AY
Sbjct: 369 PDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYE 428
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+ MP A+I R+ LGAC HG V L + + + L +L+P +++VL ++ +++G
Sbjct: 429 FVCQMPIPCTAIIWRTLLGACSMHGDV-KLAEQVKERLSELDPNNSSDHVLLSNAYAVAG 487
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVN 449
W AA + ++ ++ + K PG S ++V+
Sbjct: 488 KWKDAASVRRSMTEQRITKTPGWSMIEVD 516
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 136/302 (45%), Gaps = 20/302 (6%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA--CKEIDVAKAVFE 160
T P + C + +H+ + K+GL+SD +I LL A +D A +F
Sbjct: 4 TEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFR 63
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES-PNSVTLVSLVSACTSLINVR 219
P DV +++I G D P D+L F M+ + S P+S + +V A +L +VR
Sbjct: 64 YTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVR 123
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G +H A+V+GL+ + +GT L+ MY +CG V A KVF+ M E N +W M++
Sbjct: 124 VGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACC 183
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
G LF M L +S++ +L+ + G ++ + F EM ++
Sbjct: 184 RGGDMKGGRELFDLMPVRNL----MSWNVMLAGYTKAGELELAREMFLEMPMKDDVS--- 236
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQVLYLDDNLGK 396
+ M+ G EEA+ R + + PN L L AC G + GK
Sbjct: 237 --WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGAL-----EFGK 289
Query: 397 LL 398
+L
Sbjct: 290 IL 291
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 236/425 (55%), Gaps = 36/425 (8%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P ++N +I YAK +IE++K EM+ GL+PD FT ++ CGR +G SV
Sbjct: 191 PDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSV 250
Query: 124 HSLIFKVGL--DSDKYIGNTLLRMYAACKEIDVAKAVF---------------------- 159
H+ I + GL S+ + N LL MY CKE+ +A+++F
Sbjct: 251 HAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVG 310
Query: 160 ---------EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
E+MP RD+VSW+S+IAG+ ++F M N P+ VT+++LVS
Sbjct: 311 NLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVS 370
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
A + + G IH + V +++D LG+A ++MY KCG +++A VF + EK++
Sbjct: 371 AAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTV 430
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT MI+G A +G G+ A+ LF +M Q + P+ ++F A+L+ACSH G V +G F+ M
Sbjct: 431 WTTMITGFAFHGYGSKALQLFYEM-QEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMK 489
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
Y I+P +EHYGC+VD+LGR+G E +I MP +P+ I + L ACR +G + +
Sbjct: 490 ERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNI-EI 548
Query: 391 DDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ GK LLKLEPE YVL +++ + SG W + ++ + +G+ K GCS V V D
Sbjct: 549 AEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVV-D 607
Query: 451 GSAEE 455
G E
Sbjct: 608 GIIHE 612
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 47/417 (11%)
Query: 8 TLIQLSK--TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPV 62
TLI L K T H Q+ ++ +L T +SR IL S +L LF +
Sbjct: 34 TLILLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDMAVLLFRHHTP 93
Query: 63 TPPLFAYNTLIRAYAKTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P L+ YNT+I A S S+ +S ++ +L + + P+ T+ F+++A + L +
Sbjct: 94 HPNLYIYNTMISA---LSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQA-SKFLSQVMQI 149
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
H++I G Y+ NTL+++Y +++ +A VF++M D VS++ MI G+
Sbjct: 150 HCHAII--TGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKG 207
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL--ELDVAL 239
+ALK H M P+ T++ L+ C L + + G+S+H++ GL ++ L
Sbjct: 208 HNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLIL 267
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR---------------- 283
AL++MY KC + A +FN++ K+ SW MI+G A G
Sbjct: 268 NNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDL 327
Query: 284 -------GNYAIS--------LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
YA LF M+ + PD ++ ++SA + +G + G+
Sbjct: 328 VSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGW 387
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ R+ +K +DM + G I+ A + R + TE + + + + HG
Sbjct: 388 VVRM-QMKIDAFLGSAFIDMYWKCGSIKRACMVFREV-TEKDVTVWTTMITGFAFHG 442
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 10/277 (3%)
Query: 28 KTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIK 87
K ++ NT I + +L I+ +F F ++P L ++N++I YA+ + +
Sbjct: 294 KDTISWNTMIAGYAKVGNLEIAHNF----FEDMPCRD-LVSWNSIIAGYAQKGDCLMVQR 348
Query: 88 LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA 147
LF+ M+ + PD T +V A + G +H + ++ + D ++G+ + MY
Sbjct: 349 LFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYW 408
Query: 148 ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C I A VF E+ +DV W++MI GF S AL++F+ M+ PN VT V+
Sbjct: 409 KCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQ-EYVMPNQVTFVA 467
Query: 208 LVSACTSLINVRAGESI-HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
+++AC+ V G I +S G+E V LV++ + G + V +M K
Sbjct: 468 VLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMK 527
Query: 267 NLQS-WTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
+S W ++S A GN I+ A L+P+
Sbjct: 528 PSRSIWGAVLS--ACRAYGNIEIAEIAGKELLKLEPE 562
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 249/467 (53%), Gaps = 41/467 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L K+ + I S + + S +++ + +F+ + + ++N+LI Y +
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMG-DRNVVSWNSLITCYEQN 231
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
++E++K+F ML++ + PD T V+ AC I +G VH+ + K+ L +D +
Sbjct: 232 GPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIIL 291
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDV------------------------------- 167
N + MYA C I A+ +F+ MP+R+V
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNV 351
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+++IAG+ +AL +F +K + P T +++ AC L ++ G H +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVH 411
Query: 228 AVVNGL------ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +G E D+ +G +L++MY KCG VE+ + VF M E++ SW MI G A N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G GN A+ LF +M+ +G KPD I+ +LSAC H G V+EG++YF M R + + P +H
Sbjct: 472 GYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y CMVD+LGRAG +EEA II MP +P++VI S L AC+ H + L + + L ++
Sbjct: 532 YTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNIT-LGKYVAEKLFEV 590
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
E YVL +++ + G W A + + ++G+ K PGCSW+K+
Sbjct: 591 ETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKI 637
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 48/353 (13%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
SLF ++P +N+++ +A+ E++ F M K G + +T+ + AC
Sbjct: 107 SLFRSMPERDQC-TWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGL 165
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +HSLI K SD YIG+ L+ MY+ C ++ A+ VF+EM R+VVSW+S+I
Sbjct: 166 NDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLI 225
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGL 233
+ +ALKVF M + P+ VTL S++SAC SL ++ G+ +H+ V ++ L
Sbjct: 226 TCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKL 285
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFN-------------------------------L 262
D+ L A V+MY+KC +++A +F+
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTK 345
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M E+N+ SW +I+G NG A+SLF + + + P +F+ IL AC+ L + G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLG 405
Query: 323 KNYFDEMARVYNIKPTMEHYG----------CMVDMLGRAGLIEEAYHIIRNM 365
A V+ +K + ++DM + G +EE Y + R M
Sbjct: 406 MQ-----AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 31/275 (11%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEI------------------------------ 152
VH+ + K G ++ +I N L+ YA C +
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 153 -DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
D A ++F MP RD +W+SM++GF D +AL F M N T S +SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L ++ G IHS + DV +G+ALV+MYSKCG+V A +VF+ M ++N+ SW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I+ NG A+ +F M+++ ++PD ++ ++++SAC+ L + G+ + +
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ ++ + VDM + I+EA I +MP
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 240/449 (53%), Gaps = 9/449 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFA 68
I+ V + ++H L K L+ + I S + L L + F LP+ +
Sbjct: 66 IKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVL- 124
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ YA+ ++ F M + P FT ++ + G +H
Sbjct: 125 WNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAM 184
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G DS + N+L+ MY CK I+ A +FE M +D+ SW+S+ + C L+
Sbjct: 185 KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLR 244
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD------VALGTA 242
+ RM A P+ VT+ +++ AC+ L + G IH Y +V+GL D V L A
Sbjct: 245 LLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNA 304
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
+++MY+KCG + A VF M K++ SW IMI G +G GN A+ +F++M + LKPD
Sbjct: 305 VIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPD 364
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F +LSACSH G V +G+N+ +M Y++ PT+EHY C++DMLGRAG ++EAY +
Sbjct: 365 EVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELA 424
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
MP E N V+ R+ L ACR H + L + + + +LEPE +YVL ++V G +
Sbjct: 425 LTMPIEANPVVWRALLAACRLHKHAV-LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRY 483
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVNDG 451
+ E+ + Q+ + K PGCSW+++ +G
Sbjct: 484 EEVLEVRHTMRQQNVRKTPGCSWIELKNG 512
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
++F S+F++ +FA+N +I + E + + +M G+ PD FT+P +
Sbjct: 7 QMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAI 66
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC L I +H L+FK GL+ D +IG+ L+ Y ++ A+ FEE+P+RDVV
Sbjct: 67 KACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVV 123
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W++M+ G+ L+ F RM + P+ T+ ++S + ++ G IH +A
Sbjct: 124 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFA 183
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ G + VA+ +L++MY KC +E A ++F +MREK++ SW + S G + +
Sbjct: 184 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTL 243
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
L +M+ G++PD ++ + +L ACSHL + G+
Sbjct: 244 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGR 278
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 15/267 (5%)
Query: 145 MYAACKEIDVAKAVFEEMPVRD--VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
MY+ C +++ A ++F + P + V +++++I+GF+ P + + + +M+ P+
Sbjct: 1 MYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDK 59
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T + AC ++ ++ IH GLELDV +G+ALV Y K G +E A F
Sbjct: 60 FTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+ +++ W M++G A G+ + F +M + P + + ILS + +G ++ G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVILRSFL 378
+ A + ++DM G+ IE+A I M + N++ S
Sbjct: 177 R-IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIX--SVH 233
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPEL 405
C +H L L D + L ++P+L
Sbjct: 234 EQCGDHDGTLRLLDRM--LGAGIQPDL 258
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 235/424 (55%), Gaps = 44/424 (10%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ ++N++I + E+++ F +LK T L+PD F+ + AC + G +H
Sbjct: 204 IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIH 263
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE----------------------- 161
I + D+ +GN L+ MYA +++A+ + E+
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 162 -MPVR---------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
P R DVV+W++MI G+V +DA++VF M PNS TL +++SA
Sbjct: 324 ITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSA 383
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE-KNLQS 270
+S+ ++ G+ IH+ A+ +G L ++G AL MY+K G + A KVFNL+R+ ++ S
Sbjct: 384 SSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVS 443
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT MI LA +G G AI LF +M+ G+KPD I++ +LSAC+H GLV++G++YFD M
Sbjct: 444 WTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMK 503
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
V+ I PT+ HY CMVD+ GRAGL++EAY + NMP EP+ + S L +C+ +Y
Sbjct: 504 NVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCK-----VYK 558
Query: 391 DDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ +L K+ LL +EP Y A+V S G WD AA++ + +G+ K G SWV
Sbjct: 559 NVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWV 618
Query: 447 KVND 450
++ +
Sbjct: 619 QIQN 622
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 198/443 (44%), Gaps = 78/443 (17%)
Query: 13 SKTVHHLHQLHTLF----LKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
+KT HL H LF +KT+ NT I+S + L +F+ +PV + +
Sbjct: 21 AKTGFHL-DAHDLFNEMPVKTTFSWNT-ILSGYAKQG---KLEKAHQVFDLIPVRDSV-S 74
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T+I Y + ++IK+F +M+K + P FT V+ +C GIG VHS +
Sbjct: 75 WTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVV 134
Query: 129 KVGLDSDKYIGNTLLRMYAA-------------------------------CKEIDVAKA 157
K+GL + + N+LL MYA C +D+A A
Sbjct: 135 KLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALA 194
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLI 216
FE + RD+VSW+SMIAG ++AL+ F +K + P+ +L S +SAC +L
Sbjct: 195 QFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLE 254
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE---------------------- 254
+ G+ IH Y V + A+G AL+ MY+K G VE
Sbjct: 255 KLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314
Query: 255 -----------KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
A ++FN +++ ++ +WT MI G NG N AI +F M+ G +P+S
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNS 374
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ +A+LSA S + ++ GK R + P++ + + M +AG I A +
Sbjct: 375 FTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVF 432
Query: 363 RNMPTEPNAVILRSFLGACRNHG 385
+ + V S + A HG
Sbjct: 433 NLLRQNRDTVSWTSMIMALAQHG 455
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 72/337 (21%)
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L +T ++ N L+ YAKT +++ LF+EM P T+ +
Sbjct: 4 LGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEM------PVKTTFSW------------- 44
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
NT+L YA +++ A VF+ +PVRD VSW+++I G+
Sbjct: 45 --------------------NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQ 84
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
DA+K+F M P TL +++++C + + G+ +HS+ V GL V +
Sbjct: 85 MGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPV 144
Query: 240 GTALVEMYSK-------------------------------CGHVEKAFKVFNLMREKNL 268
+L+ MY+K CG V+ A F L+ E+++
Sbjct: 145 ANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDI 204
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
SW MI+G +G N A+ F+ +++ T LKPD S ++ LSAC++L + GK
Sbjct: 205 VSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHG 264
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+ R + ++ M ++G +E A II
Sbjct: 265 YIVRTM-FDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S++ R +FN L ++ ++I A A+ E+I+LF++ML G++PD+ TY V+
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVL 483
Query: 109 KACGRCLLIGIGGSVHSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-D 166
AC L+ G S L+ V +D ++ ++ + A E MP+ D
Sbjct: 484 SACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPD 543
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
V++W S+++ +C KV+ + LA + + L+ E +S
Sbjct: 544 VIAWGSLLS---SC-------KVYKNVDLAKVAAERLLLI---------------EPNNS 578
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
A +AL +YS CG + A K+ LM+ + ++
Sbjct: 579 GAY-----------SALANVYSSCGKWDDAAKIRKLMKARGVK 610
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 249/454 (54%), Gaps = 74/454 (16%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG----LRPDNFTYPFVVKAC 111
+F+ +P P F YNTLIR A T+ +++ L+ ML+ G +RPD T+PFV++AC
Sbjct: 34 VFDQIP-RPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRAC 92
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC---------------------- 149
G VH+ + K G +SD ++ N L+ M+A+C
Sbjct: 93 TAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWS 152
Query: 150 ---------KEIDVAKAVFEEMPVRD-------------------------------VVS 169
+I A+ +F+E PV+D VVS
Sbjct: 153 AMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVS 212
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--- 226
W+ MI+G+V C S AL++F +M+ E P+ VT++SL+SAC ++ G+ +HS
Sbjct: 213 WNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLS 272
Query: 227 -YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
NG V LG AL++MY+KCG ++ A +VF MR+K++ +W ++ GLA +G
Sbjct: 273 DMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVL 330
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
+I +F KM++ ++PD I+F A+L ACSH G+VD+G+ +F+ M Y ++P ++HYGC+
Sbjct: 331 ESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCI 390
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VDMLGRAGL++EA+ I M EPN+VI R+ L ACR HG++ L + + LLK +
Sbjct: 391 VDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEI-ELAKHANRQLLKARNDE 449
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+YVL +++ + G W + ++ ++ G+NK
Sbjct: 450 SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI----QTGLKPDSISF 306
G + A+ VF+ + + + +I G A A+SL+ +M+ G++PD ++F
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 307 SAILSACSHLGLVDEG 322
+L AC+ +G D G
Sbjct: 86 PFVLRACTAMGAGDTG 101
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 258/438 (58%), Gaps = 5/438 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLP-VTPPLFAYNTLIRAYAK 78
Q H L LK SL ++ +++ I S + + R + ++ P + ++NT+I Y +
Sbjct: 26 QFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIR 85
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ F +M K +R D T V+ AC R + +G H+L+ G + + YI
Sbjct: 86 GGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYI 145
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++L+ MYA C ++ A+ VF MP R+VV W+SMIAG +A+ +F M++A
Sbjct: 146 GSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGV 205
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+ ++VS+C + + G +H+Y +GL ++++ +L++MYSKCG V KA++
Sbjct: 206 KADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQ 265
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLG 317
+F+ + ++++ +WT+MI G A NG A+ LFA+M + + P+ + F +L+ACSH G
Sbjct: 266 IFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGG 325
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G ++F M++VYN+ P +EHYGCMVD+LGRA L+ EA I++MP P+ V+ RS
Sbjct: 326 LVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSL 385
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR GQV L + + + +LEP+ +VL ++V + + W + +
Sbjct: 386 LFACRASGQV-GLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRT 444
Query: 438 NKVPGCSWVKVNDGSAEE 455
+K PGCS+++V DG E
Sbjct: 445 SKKPGCSFIEV-DGCIHE 461
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 149/268 (55%), Gaps = 3/268 (1%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
DN++ + A R + +G H+L K+ L SD ++ N L+ MY++C A+ V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 160 EEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+ P DVVSW+++IAG++ P+ AL+ FH+M + VTL++++ AC
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G H+ V+NG E++ +G++LV MY+KCG VE+A +VFN M E+N+ WT MI+G
Sbjct: 124 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAG 183
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
+GR A+ LF M G+K D + + ++S+C +G +D G+ Y + +
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR-YLHAYCDGHGLGK 242
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++DM + G + +AY I +
Sbjct: 243 ELSVKNSLIDMYSKCGDVNKAYQIFHGL 270
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 249/438 (56%), Gaps = 8/438 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYA 77
Q+H LK LD + + S +L + + FT L F+ +P + ++N++I A +
Sbjct: 981 EQIHCDGLKLGLDTDVSV-SNALLALYAETGCFTECLKVFSLMPEYDQV-SWNSVIGALS 1038
Query: 78 KTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ S+ +++K F EM++ G T+ ++ A L + +H+L+ K L D
Sbjct: 1039 DSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 1098
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
IGN LL Y C E++ + +F M RD VSW+SMI+G++ + A+ + M
Sbjct: 1099 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 1158
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ +S T +++SAC S+ + G +H+ + +E DV +G+ALV+MYSKCG ++
Sbjct: 1159 KGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDY 1218
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS-FSAILSACS 314
A + F LM +N+ SW MISG A +G G A+ LF +M+ G PD ++ +LSACS
Sbjct: 1219 ASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACS 1278
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H+G V+EG +F M+ VY + P +EH+ CMVD+LGRAG ++E I +MP +PN +I
Sbjct: 1279 HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIW 1338
Query: 375 RSFLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
R+ LGA CR +G+ L ++LL+LEP+ NYVL A++ + W+ A+ A+
Sbjct: 1339 RTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMK 1398
Query: 434 QKGLNKVPGCSWVKVNDG 451
+ + K GCSWV + DG
Sbjct: 1399 EAAVKKEAGCSWVTMKDG 1416
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 172/375 (45%), Gaps = 15/375 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILT--SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
++H ++T L+ N I ++ + S ++ S+F L V ++N+LI
Sbjct: 879 REVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLISGLD 937
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ CS ++ + F M +TG P NFT + +C I +G +H K+GLD+D
Sbjct: 938 QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 997
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD-SPSDALKVFHRMKLA 196
+ N LL +YA VF MP D VSW+S+I + S S A+K F M
Sbjct: 998 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRG 1057
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ VT ++++SA +SL IH+ + L D A+G AL+ Y KCG + +
Sbjct: 1058 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 1117
Query: 257 FKVFNLMRE-KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
K+F M E ++ SW MISG N + A+ L M+Q G + DS +F+ +LSAC+
Sbjct: 1118 EKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACAS 1177
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+ ++ G I+ ME +VDM + G I+ A MP N
Sbjct: 1178 VATLERGME-----VHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NV 1231
Query: 372 VILRSFLGACRNHGQ 386
S + HG
Sbjct: 1232 YSWNSMISGYARHGH 1246
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 21/320 (6%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H L KT + + + I S S + RS+F+ + + + ++N++I Y++
Sbjct: 668 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSI-SWNSIISVYSR 726
Query: 79 TSCSIESIKLFDEMLKTGL----RPDNFTY-PFVVKAC-----GRCLLIGIGGSVHSLIF 128
+ + LF M K GL +P+ +T+ + AC G C+L + V
Sbjct: 727 RGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVE---- 782
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D Y+G+ L+ +A D AK +FE+M VR+VVS + ++ G V A K
Sbjct: 783 KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842
Query: 189 VFHRMK--LANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNGL-ELDVALGTALV 244
VFH MK + S + V L+S S + L R G +H++ + GL + VA+G LV
Sbjct: 843 VFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+K G + A VF LM EK+ SW +ISGL N A F +M +TG P +
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962
Query: 305 SFSAILSACSHLGLVDEGKN 324
+ + LS+C+ LG + G+
Sbjct: 963 TLISTLSSCASLGWIMLGEQ 982
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 142/274 (51%), Gaps = 14/274 (5%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTY------PF 106
+++F + V + + N L+ K + K+F EM G+ D++ F
Sbjct: 810 KNIFEQMGVRN-VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEF 868
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVR 165
V GR G VH+ + + GL+ +K IGN L+ MYA I A +VFE M +
Sbjct: 869 SVLEEGR----RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 924
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
D VSW+S+I+G + DA + F RM+ P++ TL+S +S+C SL + GE IH
Sbjct: 925 DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 984
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG- 284
+ GL+ DV++ AL+ +Y++ G + KVF+LM E + SW +I L+D+
Sbjct: 985 CDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASV 1044
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+ A+ F +M++ G ++F ILSA S L L
Sbjct: 1045 SQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG--IGGSV 123
L + LI Y + E+ F +M++ G P+++ + ++AC G +G +
Sbjct: 610 LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 669
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H LI K SD + N L+ MY +C + A++VF+ + +R+ +SW+S+I+ +
Sbjct: 670 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGD 729
Query: 183 PSDALKVFHRMKLA----NESPNSVTLVSLVSACTSLINVR--AGESIHSYAVVNGLELD 236
A +F M+ + PN T SL++A S ++ E + + +G D
Sbjct: 730 XVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQD 789
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ +G+ALV +++ G + A +F M +N+ S ++ GL +G A +F +M
Sbjct: 790 LYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD 849
Query: 297 -TGLKPDSISFSAILSACSHLGLVDEGK 323
G+ D S+ +LSA S +++EG+
Sbjct: 850 LVGINSD--SYVVLLSAFSEFSVLEEGR 875
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 14/254 (5%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H K G + ++ NTL+ +Y ++ A+ +F+EM R++V+W+ +I+G+
Sbjct: 566 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 625
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSAC--TSLINVRAGESIHSYAVVNGLELDVALG 240
P +A F M A PN S + AC + + G IH DV +
Sbjct: 626 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 685
Query: 241 TALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
L+ MY C A VF+ + +N SW +IS + G A LF+ M + GL
Sbjct: 686 NVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGL 745
Query: 300 ----KPDSISF-SAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHY--GCMVDMLGR 351
KP+ +F S I +ACS VD G ++M ARV + Y +V R
Sbjct: 746 GFSFKPNEYTFGSLITAACSS---VDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802
Query: 352 AGLIEEAYHIIRNM 365
GL ++A +I M
Sbjct: 803 FGLTDDAKNIFEQM 816
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 202 SVTLVSLVSACTSLINVRAG-------ESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ TL S SLIN G +H ++ G ++ L L+ +Y + G +
Sbjct: 537 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 596
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A K+F+ M +NL +W +ISG NG+ + A + F M++ G P+ +F + L AC
Sbjct: 597 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 656
Query: 315 HLG 317
G
Sbjct: 657 ESG 659
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 239/427 (55%), Gaps = 33/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + L ++ T++ Y + ES++LF +M + PD V+ AC
Sbjct: 322 RQLFDKMN-ERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVH 380
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--------- 164
+G SVH+ I G+ D ++GN LL +YA C ++D A FE++P
Sbjct: 381 LEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSM 440
Query: 165 ----------------------RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
+D+VSW++M+ +V D +++ ++F +M+ +N P+
Sbjct: 441 LDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDK 500
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
TL+SL+S+C + + G ++ Y N + +D LGTAL++MY KCG VE A+++F
Sbjct: 501 TTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQ 560
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+ EKN+ WT M++ A G+ AI L+ +M + G+KPD ++F A+L+ACSH GLVDEG
Sbjct: 561 IIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEG 620
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF+++ YNI PT+ HYGCMVD+LGR G +EE I MP EP+ I S + ACR
Sbjct: 621 YKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACR 680
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+H V L + K L++++P +VL +++ + +G WD +++ +++ G+ K PG
Sbjct: 681 SHHNV-ELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPG 739
Query: 443 CSWVKVN 449
+ ++ N
Sbjct: 740 FTMIEQN 746
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 52/419 (12%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
L++ + +H + +L H+ I S+ + LS++ + P
Sbjct: 41 LLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESII 100
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NTL+ K C E ++ + M+ G+ D T+ F++ AC + + +G VH I
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +K + N L+ +Y+ C ++ +FE+M RDV+SW++MI+ +V +AL
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M ++ P+ +T+VSLVS C L ++ G+ +H Y V N L + +L LV+MYS
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280
Query: 249 KCG---------------------------------HVEKAFKVFNLMREKNLQSWTIMI 275
KCG ++KA ++F+ M E++L SWT M+
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMM 340
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
SG G ++ LF +M + PD ++ +LSAC HL D G+ ++
Sbjct: 341 SGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR----------SV 390
Query: 336 KPTMEHYGCMV---------DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ YG +V D+ + G ++EA +P + A G CR+ G
Sbjct: 391 HAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGG 449
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 70/389 (17%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I Y E++ LFDEML +G+ PD T +V C + + +G +H
Sbjct: 199 VISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHL 258
Query: 126 LIFKVGLDSDKYIGNTLLRMYAAC---------------------------------KEI 152
I L + N L+ MY+ C +I
Sbjct: 259 YIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKI 318
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
D A+ +F++M R +VSW++M++G+V ++L++F +M+ N P+ V LV+++SAC
Sbjct: 319 DKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSAC 378
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH-------------------- 252
L + G S+H++ V G+ +D LG AL+++Y+KCG
Sbjct: 379 VHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWN 438
Query: 253 -----------VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
V+KA FN + EK++ SW M++ + N + +F KM + +KP
Sbjct: 439 SMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKP 498
Query: 302 DSISFSAILSACSHLGLVDEG--KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
D + ++LS+C+ +G ++ G N + E + I + ++DM G+ G +E AY
Sbjct: 499 DKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI-GIDAMLG--TALIDMYGKCGCVEMAY 555
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVL 388
I + E N + + + A GQ L
Sbjct: 556 EIFTQI-IEKNVFVWTAMMAAYAMEGQAL 583
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 252/436 (57%), Gaps = 4/436 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H+L KT D + + + + S L +F+++ V + ++ +I +
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM-VVKNVVSWTGMICGCIEFG 184
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E++ LF +L++GLRPD F V++AC R + G + + + GL + ++
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+L+ MY C ++ A+ VF+ M +D+V WS+MI G+ + P +A+++F M+ N P
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRP 304
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +V +S+C SL + G + LGT+L++ Y+KCG +E+A V+
Sbjct: 305 DCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+M+EK+ + +ISGLA G+ A +F +M + G+ P+ +F +L C+H GLVD
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVD 424
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G++YF+ M+ +++ PT+EHYGCMVD+L RAG ++EA+++I+ MP + N ++ S LG
Sbjct: 425 DGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR H + L +++ K L++LEP +YVL +++ S S WD A ++ +N+KG+ K+
Sbjct: 485 CRLHRET-QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKL 543
Query: 441 PGCSWVKVNDGSAEEM 456
PG SWV+V DG E
Sbjct: 544 PGYSWVEV-DGVVHEF 558
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 194/376 (51%), Gaps = 4/376 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS--LHFTRSLFNNLPVTPPLFAYNT 71
K + H H L+ +L H+ ++S + ++++ S + +F+ P F YNT
Sbjct: 15 KCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNT 74
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+IR ++ L+ M K + PD+FT+ FV+KAC R L +G +HSL+FK G
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
D D ++ ++ Y+ C + A VF++M V++VVSW+ MI G + +A+ +F
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+ + P+ +V ++ AC L ++ +G I GL +V + T+LV+MY+KCG
Sbjct: 195 GLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCG 254
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E+A VF+ M EK++ W+ MI G A NG AI LF +M + ++PD + LS
Sbjct: 255 SMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALS 314
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+C+ LG ++ G N+ + ++D + G +EEA + + M E +
Sbjct: 315 SCASLGALELG-NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYK-MMKEKDR 372
Query: 372 VILRSFLGACRNHGQV 387
V+ + + +GQV
Sbjct: 373 VVFNAVISGLAMYGQV 388
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 225/391 (57%), Gaps = 35/391 (8%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ G+ PD+ TYPF+ KA R L +G S+H + K G + D+++ N+L+ MY +C +
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 152 I-------------------------------DVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
I D+A+ +F+ MP RDV SWS +I G+
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ DA+ VF +M+ + N VT+VS++ AC L + G +H Y V NG EL++ L
Sbjct: 121 GNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLR 180
Query: 241 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
T+L++MY+KCG VE+AF VF +R+ ++ W MI GLA +G ++ L+ +M G
Sbjct: 181 TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAG 240
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+KPD I+F +LSAC+H GLV + F+ + + + P EHY CMVD++ RAG + EA
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGK-NGMTPKTEHYACMVDVMARAGQVAEA 299
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
Y + MP EP A +L + L C NHG+ L L + +GK L++L+PE YV ++V ++
Sbjct: 300 YQFLCQMPLEPTASMLGALLSGCMNHGK-LDLAELIGKKLIELDPEHDGRYVGLSNVYAI 358
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
WD A + A+ ++G+ K PG S+++++
Sbjct: 359 GRRWDEARIMREAMERRGVKKTPGYSFLEMS 389
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 242/443 (54%), Gaps = 11/443 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
S +HH +HT +K D ++ +I+ + + + LF + + P + ++ T
Sbjct: 271 SSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKM-PDVVSWTT 329
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LI Y + +++ F M K+ + P+ +T+ V+ AC + G +H + ++G
Sbjct: 330 LITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
L + N+++ +Y+ + A VF + +D++SWS++IA + +A
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+ PN L S++S C S+ + G+ +H++ + G++ + + +AL+ MYSKCG
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCG 509
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
VE+A K+FN M+ N+ SWT MI+G A++G AI+LF K+ GLKPD ++F +L+
Sbjct: 510 SVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLT 569
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
ACSH G+VD G YF M Y I P+ EHYGC++D+L RAG + EA H+IR+MP +
Sbjct: 570 ACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDD 629
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAE 427
V+ + L +CR HG V + G+ LL+L+P ++ A++ + G W AA
Sbjct: 630 VVWSTLLRSCRVHGDV-----DRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAH 684
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + KG+ K G SWV VND
Sbjct: 685 IRKLMKSKGVIKERGWSWVNVND 707
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 2/318 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I ++E++ F EM + + D+ T+ +KA L+ G ++H+
Sbjct: 225 SWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQT 284
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G D ++ NTL MY C + D +FE+M + DVVSW+++I +V A+
Sbjct: 285 IKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAV 344
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ F RM+ +N SPN T +++SAC +L + GE IH + + GL +++ ++V +Y
Sbjct: 345 EAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLY 404
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SK G ++ A VF+ + K++ SW+ +I+ + G A + M + G KP+ + S
Sbjct: 405 SKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALS 464
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++LS C + L+++GK + + M H ++ M + G +EEA I M
Sbjct: 465 SVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVH-SALISMYSKCGSVEEASKIFNGMKI 523
Query: 368 EPNAVILRSFLGACRNHG 385
N + + + HG
Sbjct: 524 N-NIISWTAMINGYAEHG 540
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 156/307 (50%), Gaps = 3/307 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKAC 111
+R +F+ + + ++ TLI Y S S E++ LF M ++ GL+ D F +KAC
Sbjct: 109 SRYMFDKMTHRDEI-SWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKAC 167
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
G + I G +H K GL + ++ + L+ MY +I+ VF++M R+VVSW+
Sbjct: 168 GLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWT 227
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
++IAG V +AL F M ++ +S T + A + G++IH+ +
Sbjct: 228 AIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 287
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G + + L MY+KCG + ++F M+ ++ SWT +I+ G +A+ F
Sbjct: 288 GFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAF 347
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+M ++ + P+ +F+A++SAC++L + G+ + R+ + + +V + +
Sbjct: 348 KRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRL-GLVDALSVANSIVTLYSK 406
Query: 352 AGLIEEA 358
+GL++ A
Sbjct: 407 SGLLKSA 413
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+ L+ ++ ++ +F++M RD +SW+++IAG+V +AL +F M +
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
++S+ + AC +N+ GE +H ++V +GL V + +AL++MY K G +E+ +
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++N+ SWT +I+GL G A+ F++M + + DS +F+ L A + L
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273
Query: 319 VDEG--------KNYFDEMARVYNIKPTMEHYGC--------------MVDMLGRAGLIE 356
+ G K FDE + V N TM + C M D++ LI
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATM-YNKCGKADYVMRLFEKMKMPDVVSWTTLIT 332
Query: 357 ------------EAYHIIRNMPTEPNAVILRSFLGACRN----------HGQVLYL 390
EA+ +R PN + + AC N HG VL L
Sbjct: 333 TYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRL 388
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 239/421 (56%), Gaps = 36/421 (8%)
Query: 63 TPP-LFAYNTLIRAYAKT---SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
TPP +F +NT IR +++ + S+ LF M L P+NFT+ F+ + C C+
Sbjct: 50 TPPTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFD 109
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI---- 174
+G H ++ K + D ++ N+++R Y+ C ++ A+ VF+E DVVSW+SMI
Sbjct: 110 LGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCI 169
Query: 175 ---------------------------AGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
+G+ P +AL +F M++ ++ PNS LVS
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++SAC+ L + G +H Y + +D L AL++MY+KCG ++ A + F+ R+++
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRD 289
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ ++T ISGLA NG A+ LF +M G+ PD +S+ A+L ACSH G V++G +YF
Sbjct: 290 VSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M+ V+ I+P ++HY CMVD+LGRAGL+EEA + +MP +P+ VI + LGACR +G
Sbjct: 350 SMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ +G LL++ + Y+L +++ + S + A ++ + ++ +++VPGCS ++
Sbjct: 410 -EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIE 468
Query: 448 V 448
V
Sbjct: 469 V 469
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 228/387 (58%), Gaps = 3/387 (0%)
Query: 68 AYNTLIRAYAKTSCS-IESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++N+LI A A + S +E+++ F M++ G P+ T+ ++ A L +G +H+L
Sbjct: 558 SWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHAL 617
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPSD 185
+ K + +D I N LL Y C ++ + +F M R D VSW+SMI+G++ +
Sbjct: 618 VLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPK 677
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ + M + + T +++SAC ++ + G +H +V LE D+ +G+ALV+
Sbjct: 678 AMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVD 737
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++ A + F +M +NL SW MISG A +G G ++ LFA+M G PD ++
Sbjct: 738 MYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVT 797
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSACSH GLV+EG ++FD M+ +Y + P MEH+ CMVD+LGR G + + + M
Sbjct: 798 FVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQM 857
Query: 366 PTEPNAVILRSFLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
P +PN +I R+ LGA CR +G+ L ++LL++EP NY+L +++ + G WD
Sbjct: 858 PVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDD 917
Query: 425 AAELMVAINQKGLNKVPGCSWVKVNDG 451
A+ VA+ + + K GCSWV + DG
Sbjct: 918 VAKTRVAMRKAFVKKEAGCSWVTMKDG 944
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 21/319 (6%)
Query: 19 LHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
L QL T K+ H+ + ++S F S+ + +++F + + + N LI
Sbjct: 303 LEQLLTRVEKSGFLHDLYVGSALVSGFAKAG---SIGYAKNIFQKMSYRN-VVSLNGLII 358
Query: 75 AYAKTSCSIESIKLFDEMLKT-GLRPDNF-----TYP-FVVKACGRCLLIGIGGSVHSLI 127
+ E+++LF EM + L P+++ +P F V G+ G VH+ +
Sbjct: 359 GLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGK----RKGSEVHAFL 414
Query: 128 FKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ GL ++ IGN L+ MYA C I+ A VF M +D V+W+SMI G +A
Sbjct: 415 IRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEA 474
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+K F M+ P++ T++S +S+C SL + GE +H + GL+LDV++ AL+ +
Sbjct: 475 VKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLAL 534
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY-AISLFAKMIQTGLKPDSIS 305
Y +CG+V++ K F+LM + + SW +I LAD+ A+ F M++ G P+ ++
Sbjct: 535 YGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVT 594
Query: 306 FSAILSACSHLGLVDEGKN 324
F IL+A S L L + GK
Sbjct: 595 FITILAAVSSLSLHELGKQ 613
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)
Query: 13 SKTVHHL-HQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYN 70
S ++H L Q+H L LK ++ +T I + + + + ++F+ + ++N
Sbjct: 604 SLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWN 663
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
++I Y +++ + M++ G R D FT+ V+ AC + G VH +
Sbjct: 664 SMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRA 723
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
L+SD IG+ L+ MYA C ID A FE MP R++ SW+SMI+G+ + +L +F
Sbjct: 724 CLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLF 783
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALVEMYSK 249
+MKL P+ VT V ++SAC+ V G S S + + GL + + +V++ +
Sbjct: 784 AQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGR 843
Query: 250 CGHVEKAFKVFNLMREK-NLQSW-TIMISGLADNGRGNYAISLFAKMIQTGLKP 301
G + K N M K N+ W T++ + NGR N A+ A + ++P
Sbjct: 844 VGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGR-NTALGRRAAEMLLEMEP 896
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 22/351 (6%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P+ L +++ LI Y + E+ +LF +M+ G P+++ + V++AC
Sbjct: 128 RKVFDEMPLRN-LVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQE 186
Query: 114 CLLIGI--GGSVHSLIFKVGLDSDKYIGNTLLRMYA-ACKEIDVAKAVFEEMPVRDVVSW 170
C G+ G +H L+ K +D N L+ MY A +D A+ F+ + R++VS
Sbjct: 187 CGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSL 246
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLA----NESPNSVTLVSLVSACTSLINVRAG----E 222
+SMI+ + A +F M+ PN T SL+SA SL N +G E
Sbjct: 247 NSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN--SGLVLLE 304
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+ + +G D+ +G+ALV ++K G + A +F M +N+ S +I GL
Sbjct: 305 QLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQK 364
Query: 283 RGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDE----MARVYNIKP 337
RG A+ LF +M + L P+ S+ IL+A +++ GK E + R +
Sbjct: 365 RGEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNA 422
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
+ +++M + G I +A + R M + ++V S + + Q L
Sbjct: 423 QIAIGNGLINMYAKCGAINDACVVFRLMDNK-DSVTWNSMITGLDQNKQFL 472
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H +FK G +D ++ NTL+ +YA ++ + VF+EMP+R++VSWS +I+G+
Sbjct: 95 LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRM 154
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSL--INVRAGESIHSYAVVNGLELDVALG 240
P++A ++F +M PN S++ AC ++ G IH DV
Sbjct: 155 PNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTAS 214
Query: 241 TALVEMYSKC-GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM----I 295
L+ MY G V+ A + F+ + +NL S MIS G A +F+ M +
Sbjct: 215 NVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVM 274
Query: 296 QTGLKPDSISFSAILSA-CS 314
GLKP+ +F +++SA CS
Sbjct: 275 GDGLKPNEYTFGSLISATCS 294
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ E +H NG D+ L L+ +Y++ G + KVF+ M +NL SW+ +ISG
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
N N A LF KM+ G P+ +F +++ AC G
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 254/470 (54%), Gaps = 36/470 (7%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNTL 72
T+ L Q H +K+ + SR + S ++ + +F + P LF++NT+
Sbjct: 36 TMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQ-NPNLFSWNTV 94
Query: 73 IRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
IR ++++S ++ LF +ML + + P TYP + KA + L G +H I K+G
Sbjct: 95 IRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLG 154
Query: 132 LDSDKYIGNTLLRMYAA-------------------------------CKEIDVAKAVFE 160
L D +I NT+L MYA C EID ++ +F+
Sbjct: 155 LQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFD 214
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
+MPV++ +SW+SMI G+V +ALK+F +M+ P+ T+VSL++A + +R
Sbjct: 215 KMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQ 274
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IH Y N L+L+ + TA+++MY KCG + A +VF + ++L SW MI GLA
Sbjct: 275 GVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAV 334
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG AI +F + + LKPD ISF A+L+AC+H +VDEG +F M Y I+P+++
Sbjct: 335 NGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIK 394
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HY MVDM+ RAG +EEA I+ MP E +A+I L ACR +G + + + +
Sbjct: 395 HYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNT-EMAKRAAEKVNE 453
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L+PE YVL A++ + N+ A E VA+ K + K PG S+++V++
Sbjct: 454 LDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDE 503
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 249/427 (58%), Gaps = 34/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R L PV + ++ +LI AY++ + E++ F ML G+ PD+ T V+ AC +
Sbjct: 194 RLLLAQAPVRD-VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQ 252
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------- 151
+ +G S+HSL+ + G+ + + L+ MYA C +
Sbjct: 253 LKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNA 312
Query: 152 ----------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
+DVA+++F++M VRD+++++SMI G++ +AL +F M+ + +
Sbjct: 313 IIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVD 372
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+ T+VSL+SAC SL + G ++H+ + +E D+ +GTAL++MY KCG V +A VF
Sbjct: 373 NFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQ 432
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M ++++ +WT MI+GLA NG G + F +M G +P+ +S+ A+L+ACSH L++E
Sbjct: 433 RMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNE 492
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G+ YFDEM +YNI P +EHYGCM+D+LGR+GL++EA +++ MP +PN+VI S L AC
Sbjct: 493 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSAC 552
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R H ++ L + LLK+EP+ A YV ++ S W+ A+++ + + ++ + K
Sbjct: 553 RVHKRI-DLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTA 611
Query: 442 GCSWVKV 448
G S V V
Sbjct: 612 GYSSVTV 618
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 189/377 (50%), Gaps = 4/377 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N+++ YA E++ +ML G P ++ ++ G+ +G +H
Sbjct: 962 VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHG 1021
Query: 126 LIFKVGLD-SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
++ K+G S ++ TL+ MY C D + A+F E+P + +S+I + C+
Sbjct: 1022 IVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFD 1081
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACT--SLINVRAGESIHSYAVVNGLELDVALGTA 242
AL++ H M + +P+ VT + + A + + ++ + + +HS V G E+D+A+ ++
Sbjct: 1082 AALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSS 1141
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ Y+ G + + +F + + N+ +T +IS A G G A+ LF +M+ +GLKPD
Sbjct: 1142 LITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPD 1201
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+++F ++ C G+ +EG+ + M + P H+ CMV++L R G ++EA ++
Sbjct: 1202 NVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMM 1261
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
P S L +C+ HG+ + L +L+ + + A + ++ + G+
Sbjct: 1262 EQSPLRHYTKAWSSLLQSCKAHGENV-LGKRAANMLIDVGRKDPATTLQVSNFFNDIGDR 1320
Query: 423 DTAAELMVAINQKGLNK 439
+TA + N K + K
Sbjct: 1321 ETALRIKEMTNVKEVKK 1337
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 153/325 (47%), Gaps = 50/325 (15%)
Query: 48 ISLHFTRSLFNNLPVTPPLFAYNTLIRA--YAKTSCSIESIK--LFDEMLKTGLRPDNFT 103
+ L + LF+ +P + F ++T +RA A TS I LF M + +RPD FT
Sbjct: 51 LHLRYALHLFDRMPAS--TFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFT 108
Query: 104 YPFVVKACG----RCLLIGIGGSVHSLIFKVGLDSD-KYIGNTLLRMYA----------A 148
+ F+ K R LL + +H+ + L S ++ N+L+ MY A
Sbjct: 109 FHFLFKCSSSSRPRALLCTM---LHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRA 165
Query: 149 CKEIDVAKAV---------------------FEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
EI V AV + PVRDV+SW+S+IA + D +A+
Sbjct: 166 FDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAV 225
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F M +P+ VT++ ++SAC+ L ++ G S+HS G+ + L AL++MY
Sbjct: 226 DCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMY 285
Query: 248 SKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
+KCG A +VF+ + R + QSW +I G +G + A SLF +M D I+F
Sbjct: 286 AKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVR----DIITF 341
Query: 307 SAILSACSHLGLVDEGKNYFDEMAR 331
+++++ H G + E F M R
Sbjct: 342 NSMITGYIHSGQLREALLLFMNMRR 366
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/300 (17%), Positives = 124/300 (41%), Gaps = 6/300 (2%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N +I + + + + ++ M+ +G+R T+ ++ C + +H +
Sbjct: 766 NRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL----QLHGRVLA 821
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+GL + ++G+ L+ Y + + ++F E+P+++ + ++ G + +
Sbjct: 822 LGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICC 881
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNG-LELDVALGTALVEMY 247
F M+ N ++ + C + G +H + G + ++ L +LV++Y
Sbjct: 882 FLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLY 941
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
S G K N + +++ SW ++S AD G A+ +M+ G P SF
Sbjct: 942 SAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFV 1001
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L+ G G + ++ ++ ++DM G+ + + I +P+
Sbjct: 1002 SLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPS 1061
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 34/301 (11%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN---ESPNSVTLVSLVSACTSLINV 218
M VRDV S + MI GF+ D +D + +R +A+ E+P+ T +++ C++ +
Sbjct: 757 MAVRDVASLNRMITGFIR-DGLADRARAVYRWMVASGIRETPH--TFSTILGVCSTYEAL 813
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS---WTIMI 275
+ +H + GL + +G+ALV Y HVE +L RE LQ+ +++
Sbjct: 814 Q----LHGRVLALGLCCNPFVGSALVNHYM---HVESPHASLSLFRELPLQNTAMCNVVL 866
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG-LVDEGKNYFDEMARVYN 334
GL + I F M + L+ + +S+ + C G +++G+ + +
Sbjct: 867 RGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGW 926
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ----VLYL 390
I + +VD+ G + + ++ +E + + S L + G V YL
Sbjct: 927 IPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILSMYADRGHMKEAVYYL 985
Query: 391 DDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L GK+ P + ++V ++S +G+W ++ +++ G + CS V V
Sbjct: 986 KQMLWHGKM-----PSI-RSFVSLLALSGKTGDWQLGVQIHGIVHKLGFS----CSSVHV 1035
Query: 449 N 449
Sbjct: 1036 Q 1036
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 235/402 (58%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ + + ++N+++ Y + ++I +F++ML+ G+ P T +
Sbjct: 298 SVETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH + ++ L SD + N+L+ MY+ CK +D+A +F + R V
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI G+ S+AL F MK P+S T+VS++ A L R + IH
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + L+ ++ + TALV+MYSKCG + A K+F+++ ++++ +W MI G +G G A+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF KM + ++P+ I++ +++SACSH GLVDEG +F M + Y ++P+M+HYG MVD+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG I+EA+ I NMP P + + LGAC+ H + + + K L +L P+ G
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNI-EVGEKAAKKLFELNPDEGGY 655
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+VL A++ + + W AE+ + +KGL K PGCS V++ +
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRN 697
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 5/377 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
L++L ++ LHQ+ L +K L + ++ + L S S++ +F P+ L
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFE--PIDDKLD 112
Query: 68 A-YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
A Y+T+++ YAK S ++ M ++P + + +++K CG + G +H
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ ++ + ++ MYA C++ID A +F+ MP RD+VSW+++IAGF A
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L++ RM+ + P+S+TLV+++ A + + G+SIH YA+ G V + TAL +M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG VE A +F+ M +K + SW M+ G NG AI++F KM++ G+ P ++
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
L AC+ LG ++ GK + + N+ + ++ M + ++ A I N+
Sbjct: 353 MEALHACADLGDLERGK-FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 367 TEPNAVILRSFLGACRN 383
+ LG +N
Sbjct: 412 GRTHVSWNAMILGYAQN 428
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 184/409 (44%), Gaps = 45/409 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L ++NT+I +++ + ++++L M G RPD+ T V+ A
Sbjct: 204 MFDRMP-ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
L+ +G S+H + G I L MY+ C ++ A+ +F+ M + VVSW+SM+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V P A+ VF +M P VT++ + AC L ++ G+ +H + L
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+++ +L+ MYSKC V+ A +FN + + SW MI G A NGR + A++ F++M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEG-------------KNYF--------------DE 328
G+KPDS + +++ A + L + KN F
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 329 MARVYNIKPTMEH---YGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACR 382
MAR + H + M+D G GL A + M EPN + S + AC
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 383 NHGQVLYLDDNLG-----KLLLKLEPEL---GANYVLAASVSSLSGNWD 423
+ G V D+ L K LEP + GA L + WD
Sbjct: 563 HSGLV---DEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 250/447 (55%), Gaps = 12/447 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
I + + V+ ++ L+ +D NT + + I + S SL RS+FN+ +T A
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 69 -YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I Y ++ + ++++LF +M + + D++TY V A + +G VH+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 128 FKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K GL+ + I N + YA C ++ + VF M RD++SW+S++ + C A
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+++F M+ +PN T S++ +C +L + G+ +H GL++D + +ALV+M
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A KVFN + + SWT +I+G A +G + A+ LF +M+Q G++P++++F
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH GLV+EG YF M + Y + P MEHY C+VD+L R G + +A I MP
Sbjct: 582 LCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMP 641
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNW 422
EPN ++ ++ LGACR HG V LG+L +L + E A YVL ++ SG++
Sbjct: 642 VEPNEMVWQTLLGACRVHGNV-----ELGELAAQKILSFKAENSATYVLLSNTYIESGSY 696
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVN 449
L + ++G+ K PGCSW+ VN
Sbjct: 697 KDGLSLRHVMKEQGVKKEPGCSWISVN 723
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 2/259 (0%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F++ LI A+ ++ + F EM G+ PD F Y +++ C I +G VH+
Sbjct: 137 FSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQ 196
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I G S ++ LL MYA +EI+ + VF M +VVSW++MI GF + D DA
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+F RM +P++ T + + A L +V + + YA+ G++ + +GTAL++M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 247 YSKCGHVEKAFKVFN--LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
SKCG +++A +FN + + W MISG +G A+ LFAKM Q + D
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 305 SFSAILSACSHLGLVDEGK 323
++ ++ +A + L + GK
Sbjct: 377 TYCSVFNAIAALKCLSLGK 395
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N + Y+ C +ID A +F++M R+ SW+ +IAG D + F M+
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ ++ C L ++ G +H+ V+ G + TAL+ MY+K +E ++KV
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKV 228
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN M E N+ SW MI+G N A LF +M+ G+ PD+ +F + A L V
Sbjct: 229 FNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDV 288
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ K A + ++DM + G ++EA I
Sbjct: 289 NKAKE-VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 251/431 (58%), Gaps = 4/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L+ + + +++ I + + R LF+ + V + ++ T+I Y +
Sbjct: 273 QIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM-VVKNIISWTTMISGYMQN 331
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S E++KLF EM + G +PD F V+ +CG + G VH+ K L+SD+++
Sbjct: 332 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVK 391
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA + AK VF+ M ++V+S+++MI G+ + + S+AL++FH M++ +
Sbjct: 392 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQK 451
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T +L++A ++L ++R G+ H+ V GL+ + ALV+MY+KCG +E+A K+
Sbjct: 452 PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKM 511
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN +++ W MIS A +G A+ +F +M++ G++P+ ++F A+LSACSH G V
Sbjct: 512 FNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRV 571
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++G N+F+ M + IKP EHY C+V +LGR+G + EA I MP EP A++ RS L
Sbjct: 572 EDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLS 630
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR G V L ++ + +P+ +Y+L +++ + G W ++ ++ + K
Sbjct: 631 ACRIAGNV-ELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 689
Query: 440 VPGCSWVKVND 450
PG SW++VN+
Sbjct: 690 EPGRSWIEVNN 700
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 198/374 (52%), Gaps = 15/374 (4%)
Query: 4 RHIETLIQLS---KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNN 59
R L+QLS + H +H + + L +T + + I + S S + R +F+
Sbjct: 50 REFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDK 109
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLF-DEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+P L +++++ Y++ S E++ +F D K+G P+ F V++AC + ++
Sbjct: 110 MP-HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVE 168
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H + + G D D Y+G +L+ Y+ I+ A+ VF+++ + V+W+++IAG+
Sbjct: 169 KGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 228
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
C + +L++F +M+ N P+ + S++SAC+ L + G+ IH+Y + G E+DV+
Sbjct: 229 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 288
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ L++ Y+KC V+ K+F+ M KN+ SWT MISG N A+ LF +M + G
Sbjct: 289 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 348
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
KPD + +++L++C +++G+ Y IK +E ++DM ++ L
Sbjct: 349 WKPDGFACTSVLTSCGSREALEQGRQ-----VHAYTIKANLESDEFVKNGLIDMYAKSNL 403
Query: 355 IEEAYHIIRNMPTE 368
+ +A + M +
Sbjct: 404 LIDAKKVFDVMAEQ 417
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 202/399 (50%), Gaps = 9/399 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH +++ D + + + I S + ++ R +F+ L + + T+I Y K
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAV-TWTTIIAGYTKC 230
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S S++LF +M +T + PD + V+ AC + G +H+ + + G + D +
Sbjct: 231 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 290
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ Y C + + +F++M V++++SW++MI+G++ +A+K+F M
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 350
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ S++++C S + G +H+Y + LE D + L++MY+K + A KV
Sbjct: 351 PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKV 410
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F++M E+N+ S+ MI G + + + A+ LF +M KP+ +F+A+++A S+L +
Sbjct: 411 FDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASL 470
Query: 320 DEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
G+ + +++ ++ + P + + +VDM + G IEEA + N + V S +
Sbjct: 471 RHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMI 527
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
HG+ ++ LG ++ + NYV +V S
Sbjct: 528 STHAQHGEA---EEALGMFREMMKEGIQPNYVTFVAVLS 563
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
+++ N P +L+ S + + IH +V+GL+ D L L+ + SK
Sbjct: 40 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILS 311
V+ A VF+ M KNL +W+ M+S + G A+ +F + ++G P+ ++++
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159
Query: 312 ACSHLGLVDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
AC+ LG+V++G ++ FD+ V ++D + G IEEA ++
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT---------SLIDFYSKNGNIEEA-RLVF 209
Query: 364 NMPTEPNAVILRSFLGACRNHGQ 386
+ +E AV + + G+
Sbjct: 210 DQLSEKTAVTWTTIIAGYTKCGR 232
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 232/406 (57%), Gaps = 12/406 (2%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML---------KTGLRPDNFT 103
R LF+ +P + + +LI Y + + E++ +F E L + G D+
Sbjct: 136 ARVLFDEIP-RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVA 194
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
V+ AC R + VH + KVGLD + NTLL YA C E+ +++ VF++M
Sbjct: 195 MISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA 254
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGE 222
+DVVSW+SMIA + +DA +VFH M K N VTL +L+ AC +R G
Sbjct: 255 EKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGM 314
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H + G +V + T++++MY KCG E A F+ M+EKN++SWT MI+G +G
Sbjct: 315 CLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHG 374
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
A+ +F +MI G+KP+ I+F ++L+ACSH G ++EG +F+ M+ YN++P +EHY
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHY 434
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLE 402
GCMVD+LGRAG I+EAY++I++M + V+ S L ACR H V L + + L KL+
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDV-ELAEISARELFKLD 493
Query: 403 PELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
P YVL A++ + +G W + + + +GL K PG S V++
Sbjct: 494 PSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVEL 539
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 51/408 (12%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
QL T+ K +H F T+ + + + T +LFN ++++N+LI A+
Sbjct: 10 QLLTISFKIHKNH-------FSTTAAATNTNLT-TLFNKYFDRTDVYSWNSLIAELARGG 61
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
S ES++ F M K ++P+ T+P +K+C + G H G +SD ++ +
Sbjct: 62 DSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSS 121
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY+ C ++ A+ +F+E+P R++V+W+S+I G+V D +AL VF
Sbjct: 122 ALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEG 181
Query: 201 N---------SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
N SV ++S++SAC+ + N E +H A+ GL+ + + L++ Y+KCG
Sbjct: 182 NGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCG 241
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAIL 310
V + KVF+ M EK++ SW MI+ A NG A +F M++ G K + ++ S +L
Sbjct: 242 EVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLL 301
Query: 311 SACSHLGLVDEGKNYFDE---MARVYNI---------------------------KPTME 340
AC+H G + G D+ M V N+ + +
Sbjct: 302 LACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR 361
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHG 385
+ M+ G G EA + M +PN + S L AC + G
Sbjct: 362 SWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAG 409
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 255/449 (56%), Gaps = 12/449 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
H Q+H +K LD + + + + + + S+ + +F+ +P + ++ T+I +
Sbjct: 401 HGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGH 459
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
A+ +++LF E+ G+ D ++ AC LI +HS I + GL SD
Sbjct: 460 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDL 518
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N ++ +Y C +D A +FE + +DVVSW+SMI+ +V ++AL++FH MK
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 578
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+S++LVS++SA SL ++ G+ IH + + G L+ +L + LV+MY++CG +EK+
Sbjct: 579 GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 638
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
VFN +R K+L WT MI+ +G G AI LF +M + PD I+F A+L ACSH
Sbjct: 639 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 698
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL++EG+ + + M Y ++P EHY C+VD+LGRA +EEAY ++ M EP A + +
Sbjct: 699 GLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 758
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
LGAC+ H + LG++ LL+++PE NYVL ++V S W + + +
Sbjct: 759 LLGACQIHS-----NKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRM 813
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
GL K PGCSW++V + M+++ +
Sbjct: 814 KASGLKKNPGCSWIEVGNKVHTFMARDKS 842
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 159/274 (58%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ R LF+ +P + ++N++I AY+ SIE+++LF EM K L P+ +T+ ++
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 290
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC I G +H+ + K + ++ N L+ MYA ++ A +F M D +S
Sbjct: 291 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 350
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+SM++GFV +AL+ +H M+ A + P+ V ++S+++A N G IH+YA+
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAM 410
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
NGL+ D+ +G +LV+MY+K ++ +F+ M +K++ SWT +I+G A NG + A+
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 470
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
LF ++ G+ D + S+IL ACS L L+ K
Sbjct: 471 LFREVQLEGIDLDVMMISSILLACSGLKLISSVK 504
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 148/266 (55%), Gaps = 2/266 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
LF+ +P +F +N +I AY + S++L+ EM +G+ D T+P ++KACG
Sbjct: 133 AEKLFDGMP-HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWS 171
G VH L K G S ++ N+++ MY C +++ A+ +F+ MP + DVVSW+
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
SMI+ + + +AL++F M+ A+ +PN+ T V+ + AC ++ G IH+ + +
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
++V + AL+ MY++ G + +A +F M + + SW M+SG NG + A+ +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 292 AKMIQTGLKPDSISFSAILSACSHLG 317
+M G KPD ++ +I++A + G
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSG 397
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 152/330 (46%), Gaps = 39/330 (11%)
Query: 99 PDNFT----YPFVVKACGRCLLIGIGGSVHS-LIFKVGLDSDKYIGNTLLRMYAACKEID 153
P F+ Y V++ CG + G VH+ +I L + ++ L+ MY C +
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F+ MP + + +W++MI +V P +L+++ M+++ ++ T ++ AC
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWT 272
L + R G +H A+ G V + ++V MY+KC + A ++F+ M EK ++ SW
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---------K 323
MIS + NG+ A+ LF +M + L P++ +F A L AC + +G
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311
Query: 324 NY----------------FDEMARVYNIKPTMEH-----YGCMVDMLGRAGLIEEA---Y 359
+Y F +M NI M+ + M+ + GL EA Y
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
H +R+ +P+ V + S + A G L+
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLH 401
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 244/437 (55%), Gaps = 44/437 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-------DNFTYPFVVKACGRCLL 116
P L +N +I+AYA+ +++ ++ ML+ P D FTYPF++KACG
Sbjct: 75 PNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW------ 170
+ +G VH+ + + G DS + N+L+ MY ++ +A VF+EM RDVVSW
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 171 -------------------------SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
++M++G+ A+ F M+ P+ V++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
V+++ AC L + G I++Y +G+ + AL+EMY+KCG +++A ++F+ M +
Sbjct: 255 VAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKN 324
K++ SW+ +I GLA +GR + A+ LF +M + G ++P+ I+F +LSACS+ GLVDEG +
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+FD M VY ++P +EHYGC+VD+LGR+G I A ++R+MP +A + S L ACR+H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 385 GQVLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
G V D + + L++LEP+ N V+ A+V + + W A AI + + K PG
Sbjct: 435 GDV---DTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 443 CSWVKVNDGSAEEMSKE 459
CS ++V + E ++ E
Sbjct: 492 CSLIEVGNVVREFVAGE 508
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H + V + L T +V + + V A +VF +R+ NL MI A N +
Sbjct: 33 VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQ 92
Query: 284 GNYAISLFAKMIQTGLKP-------DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
A++++ +M++ P D ++ +L AC ++ GK + R
Sbjct: 93 HRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR-SGCD 151
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +++M RAG + A+ + M
Sbjct: 152 SSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 257/496 (51%), Gaps = 54/496 (10%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-SLFNNL 60
+ +H +L+Q T+ L Q+HT + F+L L +S + T +L N
Sbjct: 17 LQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKN-----FLLVKL-LSFYITSGNLLNAH 70
Query: 61 PV-----TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
V P +N +IR ++++ + ++L++ M++ P+ FTY F++ C R
Sbjct: 71 KVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSR 130
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA---------------------------- 147
L+ G VH + G ++ ++ +L+ +YA
Sbjct: 131 LLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNS 190
Query: 148 ------ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
C ++D A+ +F+EMP R+VVSW++MIAG AL +FH M+ A +
Sbjct: 191 LLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLD 250
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAV----VNGLELDVALGTALVEMYSKCGHVEKAF 257
V LV+ +SAC L +++ G IHSY L V+L +L+ MY+ CG ++KA+
Sbjct: 251 QVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAY 310
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL---KPDSISFSAILSACS 314
KVF M++++ SWT MI+G A G A+ +F M + G +PD I+F +L ACS
Sbjct: 311 KVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACS 370
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H G VD+G+++F+ M + + I P +EHYGCMVD+L RAG ++EA+ +I +MP +PN +
Sbjct: 371 HAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVW 430
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY-VLAASVSSLSGNWDTAAELMVAIN 433
+ LG CR H KL L+L+P+ A Y VL ++V + + W A + +
Sbjct: 431 GALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMV 490
Query: 434 QKGLNKVPGCSWVKVN 449
+ G+ K G SWV++N
Sbjct: 491 EIGVRKPAGRSWVQIN 506
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 224/384 (58%), Gaps = 9/384 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF TLI YA+ +C + + K+FDEM++ P+ + +V AC RC + V
Sbjct: 141 LFVGTTLISMYAECACLVFARKVFDEMIE----PNIVAWNAIVAACFRCEGVKDAEQVFR 196
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ L S N +L Y E+ +A+ VF +MP++D VSWS+MI GF + +D
Sbjct: 197 CMPIRNLTS----WNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFND 252
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A F ++ PN V+L ++SAC G +H + +G +++ AL++
Sbjct: 253 AFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALID 312
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
YSKCG+++ A VF+ M ++ SWT MI+G+A +G G AI LF +M ++ +KPDSI+
Sbjct: 313 TYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSIT 372
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +IL ACSH GLVD G +YF M Y I+P +EHYGCMVD+ GRAG +++AY + M
Sbjct: 373 FISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQM 432
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P PN ++ R+ LGAC HG LYL + + L +L+PE ++VL +++ +++G W
Sbjct: 433 PISPNDIVWRTLLGACSIHGN-LYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDV 491
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
A L ++ + L K PG S ++VN
Sbjct: 492 AALRRSMTHQRLKKTPGWSMIEVN 515
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLP 61
H L K++ + Q+ L KT L+ + + +L +L SLH+ R LF ++
Sbjct: 7 HCLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIR 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIG 120
P +F YNTLIR + + +++LF EM + + PD+F++ F++KA C + G
Sbjct: 67 -NPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNG 125
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+H L GLDS ++G TL+ MYA C + A+ VF+EM ++V+W++++A C
Sbjct: 126 LQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRC 185
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ DA +VF M + N + ++ L
Sbjct: 186 EGVKDAEQVFRCMPIRNLTSWNIMLAG--------------------------------- 212
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
Y+K G ++ A +VF M K+ SW+ MI G A NG N A + F ++ + G++
Sbjct: 213 ------YTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMR 266
Query: 301 PDSISFSAILSACSHLGLVDEGK 323
P+ +S + +LSAC+ G + G+
Sbjct: 267 PNEVSLTGVLSACAQAGAFEFGR 289
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 253/469 (53%), Gaps = 51/469 (10%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL---------FNNLPVTPPLFAYNTL 72
+H + +K S + FI SL +HF SL F+ + V + ++N++
Sbjct: 153 IHGMVMKASFGSDL-----FISNSL---IHFYSSLGDLDSAYLVFSKI-VEKDIVSWNSM 203
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I + + E+++LF M RP+ T V+ AC + + + G I + G+
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGI 263
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS---------- 182
D + + N +L MY C ++ A+ +F++M +D+VSW++MI G+
Sbjct: 264 DINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDV 323
Query: 183 ---------------------PSDALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRA 220
P +AL +F ++L N PN VTL S ++AC L +
Sbjct: 324 MPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDL 383
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IH Y G++L+ + T+L++MYSKCGH+EKA +VF + +++ W+ MI+GLA
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G G AI LF+KM +T +KP++++F+ +L ACSH GLVDEG+ +F++M VY + P +
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HY CMVD+LGRAG +EEA +I MP P+A + + LGACR +G V + +LL
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
GA YVL +++ + +G WD + L + GL K PGCS ++VN
Sbjct: 564 DSNNHGA-YVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVN 611
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 211/394 (53%), Gaps = 40/394 (10%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLP 61
+ LI HL QLH L+T L + T + + L+S S SL + +F+ +P
Sbjct: 33 VPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPS-SLDYACKVFDQIP 91
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIG 120
P L+ +NTLIRA+A + I+ + +F +ML R P+++T+PFV+KA + G
Sbjct: 92 -RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAG 150
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
++H ++ K SD +I N+L+ Y++ ++D A VF ++ +D+VSW+SMI+GFV
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQG 210
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
SP +AL++F RMK+ N PN VT+V ++SAC I++ G Y NG+++++ L
Sbjct: 211 GSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILS 270
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA--------------------- 279
A+++MY KCG +E A ++F+ M EK++ SWT MI G A
Sbjct: 271 NAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDIT 330
Query: 280 ----------DNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
NG+ A+++F ++ + KP+ ++ ++ L+AC+ LG +D G +
Sbjct: 331 AWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHV 389
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ IK ++DM + G +E+A +
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVF 423
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 250/447 (55%), Gaps = 12/447 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
I + + V+ ++ L+ +D NT + + I + S SL RS+FN+ +T A
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 69 -YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I Y ++ + ++++LF +M + + D++TY V A + +G VH+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 128 FKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K GL+ + I N + YA C ++ + VF M RD++SW+S++ + C A
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+++F M+ +PN T S++ +C +L + G+ +H GL++D + +ALV+M
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A KVFN + + SWT +I+G A +G + A+ LF +M+Q G++P++++F
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH GLV+EG YF M + Y + P MEHY C+VD+L R G + +A I MP
Sbjct: 582 LCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMP 641
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNW 422
EPN ++ ++ LGACR HG V LG+L +L + E A YVL ++ SG++
Sbjct: 642 VEPNEMVWQTLLGACRVHGNV-----ELGELAAQKILSFKAENSATYVLLSNTYIESGSY 696
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVN 449
L + ++G+ K PGCSW+ VN
Sbjct: 697 KDGLSLRHLMKEQGVKKEPGCSWISVN 723
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 2/259 (0%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F++ LI A+ ++ + F EM G+ PD F Y +++ C I +G VH+
Sbjct: 137 FSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQ 196
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I G S ++ LL MYA +EI+ + VF M +VVSW++MI GF + D DA
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+F RM +P++ T + + A L +V + + YA+ G++ + +GTAL++M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 247 YSKCGHVEKAFKVFN--LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
SKCG +++A +FN + + W MISG +G A+ LFAKM Q + D
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 305 SFSAILSACSHLGLVDEGK 323
++ ++ +A + L + GK
Sbjct: 377 TYCSVFNAIAALKCLSLGK 395
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N + Y+ C +ID A +F++M R+ SW+ +IAG D + F M+
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ ++ C L ++ G +H+ V+ G + TAL+ MY+K +E ++KV
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKV 228
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN M E N+ SW MI+G N A LF +M+ G+ PD+ +F + A L V
Sbjct: 229 FNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDV 288
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++ K A + ++DM + G ++EA I
Sbjct: 289 NKAKE-VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 259/450 (57%), Gaps = 16/450 (3%)
Query: 9 LIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
L+ K + LHQ LH +K ++ + +++ + L + + RS+F+ L
Sbjct: 209 LVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELH-GI 267
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ ++ +I Y + C E++KLF + + + P++ T V +C + L + +G S+H
Sbjct: 268 DIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIH 327
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
L K+G D + N+L+ YA C+ A+ VFE + RDVV+W+S+I+ F S
Sbjct: 328 GLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAY 386
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTAL 243
+AL++FH+M++ + P++VTLVS++SAC SL ++ G S H+YAV GL +V +GTAL
Sbjct: 387 EALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTAL 446
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ Y+KCG E A +F+ M +K+ +W+ MISG G G ++S+F M++ LKP+
Sbjct: 447 LTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNE 506
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
F++ILSACSH G++ EG F + + YN+ P+ +HY CMVD+L RAG ++EA I+
Sbjct: 507 EIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQ 566
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLS 419
MP +P+ + +FL C H + +LG+L +L+L P YVL ++ +
Sbjct: 567 KMPVQPDVSLFGAFLHGCGLHSRF-----DLGELAIKRMLELHPGDACYYVLMCNLYASD 621
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
W ++ + Q+GL K PGCS ++++
Sbjct: 622 ARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 187/375 (49%), Gaps = 6/375 (1%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYN 70
L ++ L ++H + L + ++ + S L R +F+ +P P ++
Sbjct: 14 LCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIP-HPDFLSWK 72
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+IR Y S + + ++ M DN + V+KAC G VH I K
Sbjct: 73 VIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKF 132
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G + D ++ L+ MYA C EI+ +++VF+E R+V SWSSMIAG+V + D L +F
Sbjct: 133 G-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLF 191
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+RM+ N +TL LV AC L + G+ +H Y + G+EL L TAL+++Y+KC
Sbjct: 192 NRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKC 251
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G V A VF+ + ++ SWT MI G NG A+ LF + Q + P+ ++ +++
Sbjct: 252 GVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVF 311
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S+CS L ++ G++ ++ + P + + +VD + + +A ++ + ++ +
Sbjct: 312 SSCSQLLNLNLGRSIHGLSIKLGSRDPIVTN--SLVDFYAKCQMNRDARYVFETI-SDRD 368
Query: 371 AVILRSFLGACRNHG 385
V S + A +G
Sbjct: 369 VVAWNSIISAFSQNG 383
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 238/443 (53%), Gaps = 9/443 (2%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIR 74
V + ++H L K L+ + I S + L L + F LP+ + +N ++
Sbjct: 152 VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVL-WNAMVN 210
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
YA+ ++ F M + P FT + + G +H K+G DS
Sbjct: 211 GYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDS 270
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ N+L+ MY CK I+ A +FE M +D+ SW+S+++ C L++ RM
Sbjct: 271 GVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML 330
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD------VALGTALVEMYS 248
A P+ VT+ +++ AC+ L + G IH Y +V+GL D V L A+++MY+
Sbjct: 331 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 390
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + A VF M K++ SW IMI G +G GN A+ +F++M + LKPD ++F
Sbjct: 391 KCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH G V +G+N+ +M Y++ PT+EHY C++DMLGRAG ++EAY + MP E
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
N V+ R+ L ACR H + L + + + +LEPE +YVL ++V G ++ E+
Sbjct: 511 ANPVVWRALLAACRLHKHAV-LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEV 569
Query: 429 MVAINQKGLNKVPGCSWVKVNDG 451
+ Q+ + K PGCSW+++ +G
Sbjct: 570 RHTMRQQNVRKTPGCSWIELKNG 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 154/288 (53%), Gaps = 3/288 (1%)
Query: 37 IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG 96
++S F+ + + + ++ N+ +FA+N +I + E + + +M G
Sbjct: 75 LVSSFVQLEIELPSNTLKAGENDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEG 134
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK 156
+ PD FT+P +KAC L I +H L+FK GL+ D +IG+ L+ Y ++ A+
Sbjct: 135 VMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
FEE+P+RDVV W++M+ G+ L+ F RM + P+ T+ +S +
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMG 251
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
++ G IH +A+ G + VA+ +L++MY KC +E A ++F +MREK++ SW ++S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
G + + L +M+ G++PD ++ + +L ACSHL + G+
Sbjct: 312 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGRE 359
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 28/252 (11%)
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
+V +++++I+GF+ P + + + +M+ P+ T + AC ++ ++ IH
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIH 159
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
GLELDV +G+ALV Y K G +E A F + +++ W M++G A G+
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNYFDEMARVYNIKP 337
+ F +M + P + + LS + +G ++ G K +D V N
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSN--- 276
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVILRSFLGACRNHGQVLYLDDN 393
++DM G+ IE+A I M + N+++ S C +H L L D
Sbjct: 277 ------SLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV--SVHEQCGDHDGTLRLLDR 328
Query: 394 LGKLLLKLEPEL 405
+ L ++P+L
Sbjct: 329 M--LGAGIQPDL 338
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 252/448 (56%), Gaps = 17/448 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
LI K++ +L Q+H + L H+T +S+ + S ++ L + S+ +P P +F
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIP-NPSVFL 73
Query: 69 YNTLIRAYAKTSCSIES---IKLFDEMLKTG---LRPDNFTYPFVVKACG---RCLLIGI 119
YNTLI + S ++ L+D++L + +RP+ FTYP + KA G + G
Sbjct: 74 YNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGR 133
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV- 178
H L F ++ D+++ L+ YA C ++ A+++FE + D+ +W++++A +
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 179 --ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
DS + L +F RM++ PN ++LV+L+ +C +L G H Y + N L L+
Sbjct: 194 SEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+GT+L+++YSKCG + A KVF+ M ++++ + MI GLA +G G I L+ +I
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS 310
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
GL PDS +F +SACSH GLVDEG F+ M VY I+P +EHYGC+VD+LGR+G +E
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA I+ MP +PNA + RSFLG+ + HG + L K LL LE E NYVL +++
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIAL-KHLLGLEFENSGNYVLLSNIY 429
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ W + + +NK PG S
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 258/501 (51%), Gaps = 76/501 (15%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTS---------LSISLHFTRSLFNNLPVTPPLFAY 69
L Q+H L + N + + +LT+ + + +F +P P F +
Sbjct: 17 LRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIP-QPDTFMW 75
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------------GRCLL 116
NT IR +++ + ++ L+ +M ++PDNFT+P V+KAC GR
Sbjct: 76 NTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFR 135
Query: 117 IGIGGSV----HSLIFKVGL-----------DSDK------------------------- 136
+G G +V L+F DSDK
Sbjct: 136 LGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKL 195
Query: 137 ---------YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
N ++ Y E++ A+ +F+E P++DVVSW++M+ G+V + +AL
Sbjct: 196 FDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEAL 255
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVEM 246
++F M E P+ VT++SL+SAC L + GE +H+ + +N +L LG ALV+M
Sbjct: 256 ELFDEMCEVGECPDEVTMLSLLSACADLGD--XGEKVHAKIMELNKGKLSTLLGNALVDM 313
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG++ K VF L+R+K++ SW +I GLA +G ++ LF +M +T + PD I+F
Sbjct: 314 YAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITF 373
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L+ACSH G VDEG YF M Y I+P + H GC+VDML RAGL++EA+ I +M
Sbjct: 374 VGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMK 433
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
EPNA++ RS LGAC+ HG V L + LL++ + +YVL ++V + G WD A
Sbjct: 434 IEPNAIVWRSLLGACKVHGDV-ELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAE 492
Query: 427 ELMVAINQKGLNKVPGCSWVK 447
+ ++ G+ K G S+V+
Sbjct: 493 NVRKLMDDNGVTKTRGSSFVE 513
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 161/357 (45%), Gaps = 33/357 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ P+ + ++N ++ Y + + E+++LFDEM + G PD T ++ AC
Sbjct: 224 RRLFDEAPM-KDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACAD 282
Query: 114 CLLIGIGGSVHSLIFKVGLDS-DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
L G VH+ I ++ +GN L+ MYA C I VF + +D+VSW+S
Sbjct: 283 --LGDXGEKVHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNS 340
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN- 231
+I G ++L +F M+ P+ +T V +++AC+ NV G + Y + N
Sbjct: 341 VIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHTGNVDEGNR-YFYLMKNK 399
Query: 232 -GLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAIS 289
+E ++ +V+M ++ G +++AF M+ E N W ++ +G A
Sbjct: 400 YKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKR 459
Query: 290 LFAKMIQTGLKPDSISFSAILSA--CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
++++ ++ D +LS SH E N++ M+ G
Sbjct: 460 ATEQLLR--MRVDQSGDYVLLSNVYASH-----------GEWDGAENVRKLMDDNGVTKT 506
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
R EAY I EPN V R+ LGAC +G V L + + LL+L +
Sbjct: 507 ---RGSSFVEAYRI------EPNPVNGRTLLGACIVYGDV-ELAKRVNEELLRLRRD 553
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 256/452 (56%), Gaps = 5/452 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
+R I ++Q +++ L ++H+ + L H+ I + RF S++ SL + + LF+
Sbjct: 5 ARVIVRMLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFDR 64
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIG 118
P A+N LIR ++ +S + +I ++ ML + + RPD FT+ F +KAC R LI
Sbjct: 65 FDSDPSTSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIP 124
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+H + + G +D + L+R Y+A +++A VF+EMPVRD+VSW++MI+ F
Sbjct: 125 KCLELHGSVIRSGFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCFS 184
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
A ++ RM ++ T+V+L+S+C + + G +H A E V
Sbjct: 185 HAGLHHQAFSMYSRMANEGVCVDAYTIVALLSSCAHVSALNMGVMLHRIACDIRCESSVF 244
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ AL++MY+KCG +E A VF MR++++ +W MI G +G G AIS F KM+ +G
Sbjct: 245 VCNALIDMYAKCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++P++++F +L CSH GLV EG +F+ M+ +++ P ++HYGCMVD+ GRAG +E+A
Sbjct: 305 VRPNAVTFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKA 364
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+I + V+ R+ LG+C+ H + L L + K L++LE +YVL S+ S
Sbjct: 365 LEMIHTSSCHEDPVLWRTLLGSCKIH-RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + A + I L +PG SW+++ D
Sbjct: 424 ANDAQGFASMRKLIRSHDLRTIPGWSWIEIGD 455
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 236/397 (59%), Gaps = 3/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ LP + + LI YA+ +++L + M + + P+ T+ +++ C
Sbjct: 203 RVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH I + G + ++ N+L+ MY C ++ A+ +F ++P RDVV+W++M
Sbjct: 262 PAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAM 321
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ G+ +A+ +F RM+ P+ +T S++++C+S ++ G+ IH V G
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY 381
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL-ADNGRGNYAISLFA 292
LDV L +ALV MY+KCG ++ A VFN M E+N+ +WT +I+G A +GR A+ F
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + G+KPD ++F+++LSAC+H+GLV+EG+ +F M Y IKP +EHY C VD+LGRA
Sbjct: 442 QMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA 501
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G +EEA ++I +MP P + + L ACR H V + + +LKL+P+ YV
Sbjct: 502 GHLEEAENVILSMPFIPGPSVWGALLSACRVHSDV-ERGERAAENVLKLDPDDDGAYVAL 560
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+S+ + +G ++ A ++ + ++ + K PG SW++V+
Sbjct: 561 SSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 597
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 209/376 (55%), Gaps = 7/376 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
+++ ++H LK+ + N + + + + + SL R +F+++ + ++ +
Sbjct: 61 RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR-DRNIVSWTAM 119
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I A+ + ++E+ K ++ M G +PD T+ ++ A L+ +G VH I + GL
Sbjct: 120 IEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGL 179
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ + +G +L+ MYA C +I A+ +F+ +P ++VV+W+ +IAG+ AL++
Sbjct: 180 ELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLET 239
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ A +PN +T S++ CT+ + G+ +H Y + +G ++ + +L+ MY KCG
Sbjct: 240 MQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG 299
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+E+A K+F+ + +++ +WT M++G A G + AI+LF +M Q G+KPD ++F+++L++
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359
Query: 313 CSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
CS + EGK ++ YN+ ++ +V M + G +++A ++ N +E N
Sbjct: 360 CSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDA-SLVFNQMSERNV 416
Query: 372 VILRSFL-GACRNHGQ 386
V + + G C HG+
Sbjct: 417 VAWTAIITGCCAQHGR 432
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 166/296 (56%), Gaps = 15/296 (5%)
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
KT E++ + + M+ G R + + +++ C R + G VH+ I K G+ ++Y
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ NTLL MYA C + A+ VF+ + R++VSW++MI FVA + +A K + MKLA
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ VT VSL++A T+ ++ G+ +H V GLEL+ +GT+LV MY+KCG + KA
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKAR 203
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F+ + EKN+ +WT++I+G A G+ + A+ L M Q + P+ I+F++IL C+
Sbjct: 204 VIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPA 263
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYG-------CMVDMLGRAGLIEEAYHIIRNMP 366
++ GK Y I+ YG ++ M + G +EEA + ++P
Sbjct: 264 ALEHGKK-----VHRYIIQSG---YGRELWVVNSLITMYCKCGGLEEARKLFSDLP 311
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 244/437 (55%), Gaps = 44/437 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-------DNFTYPFVVKACGRCLL 116
P L +N +I+AYA+ +++ ++ ML+ P D FTYPF++KACG
Sbjct: 75 PNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW------ 170
+ +G VH+ + + G DS + N+L+ MY ++ +A VF+EM RDVVSW
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 171 -------------------------SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
++M++G+ A+ F M+ P+ V++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
V+++ AC L + G I++Y +G+ + AL+EMY+KCG +++A ++F+ M +
Sbjct: 255 VAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKN 324
K++ SW+ +I GLA +GR + A+ LF +M + G ++P+ I+F +LSACS+ GLVDEG +
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+FD M VY ++P +EHYGC+VD+LGR+G I A ++R+MP +A + S L ACR+H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 385 GQVLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
G V D + + L++LEP+ N V+ A+V + + W A AI + + K PG
Sbjct: 435 GDV---DTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 443 CSWVKVNDGSAEEMSKE 459
CS ++V + E ++ E
Sbjct: 492 CSLIEVGNVVREFVAGE 508
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H + V + L T +V + + V A +VF +R+ NL MI A N +
Sbjct: 33 VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQ 92
Query: 284 GNYAISLFAKMIQTGLKP-------DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
A++++ +M++ P D ++ +L AC ++ GK + R
Sbjct: 93 HRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR-SGCD 151
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +++M RAG + A+ + M
Sbjct: 152 SSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 234/417 (56%), Gaps = 37/417 (8%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG---------------- 112
++ LIRA+A + ++ L+ +++ GL P T P ++K+
Sbjct: 56 HDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVH 115
Query: 113 -RCLLIGIGG---------SVHS----------LIFKVGLDSDKYIGNTLLRMYAACKEI 152
+ +G+ G VH+ L+ + D NTL+ +A +
Sbjct: 116 AHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRV 175
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
A+++F+EMP R+ VSWS+M+ G+V +AL VF +M+ P+ LV +++AC
Sbjct: 176 ADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAAC 235
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L + G+ +H Y N + + V LGTALV+MY+KCG V+ +VF M++KN+ +WT
Sbjct: 236 AQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWT 295
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI GLA +GRG+ +++LF++M +G+KPD I+F L AC+H GLVD+G+ F+ M
Sbjct: 296 TMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNN 355
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y IKP +EHYGCMVD+L R GL+ EA ++ MP +P+A+I + + CR H V L +
Sbjct: 356 YGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNV-ELAE 414
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ K ++LEP+ YVL ++ S SG +A E+ + +KG+ K PGCS V++
Sbjct: 415 YVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIK 471
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 44/266 (16%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
RSLF+ +P + +++ ++ Y + E++ +F +M G+RPD+ V+ AC
Sbjct: 178 ARSLFDEMPERNAV-SWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + G VH + + ++G L+ MYA C E+ + VFE M ++V++W++
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTT 296
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G SD+L +F +M+ + P+ + + + ACT
Sbjct: 297 MIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACT------------------- 337
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMR-----EKNLQSWTIMISGLADNGRGNYA 287
G V+K ++FN M + ++ + M+ LA NG + A
Sbjct: 338 ----------------HTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 288 ISLFAKMIQTGLKPDSISFSAILSAC 313
+ KM +KPD++ + A+++ C
Sbjct: 382 RDMVEKM---PMKPDALIWGALMAGC 404
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 222/386 (57%), Gaps = 9/386 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T++ + + E++++F M G+ D +T+ ++ ACG + G +H+ I
Sbjct: 240 WTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ D + ++G+ L+ MY+ C+ I +A+ VF M ++++SW+++I G+ +A++
Sbjct: 300 RTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
VF M+ P+ TL S++S+C +L ++ G H A+V+GL + + ALV +Y
Sbjct: 360 VFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M + SWT ++SG A GR I LF KM+ G+KPD ++F
Sbjct: 420 KCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIG 479
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACS G V++G++YF M + + I P +HY CM+D+ R+G ++EA I+ MP
Sbjct: 480 VLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMH 539
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDT 424
P+A+ + L ACR G D +GK LL+++P+ A+YVL S+ + G W+
Sbjct: 540 PDAIGWGTLLSACRLRG-----DMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNE 594
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
A+L + + + K PGCSW+K +
Sbjct: 595 VAQLRRGMRDRQVKKEPGCSWIKYKN 620
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 188/388 (48%), Gaps = 35/388 (9%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLK--TGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+ +YN +I ++ ++++++ +L+ + +RP T +V A +G
Sbjct: 103 IVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQF 162
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEI 152
H I ++G ++ ++G+ L+ MYA CK +
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+ A+ +FE M RD ++W++M+ GF S+AL++F RM+ + + T S+++AC
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
+L + G+ IH+Y + + +V +G+ALV+MYSKC ++ A VF M KN+ SWT
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+I G NG A+ +F++M + G+ PD + +++S+C++L ++EG F +A V
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALV 401
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
+ + +V + G+ G IE+A+ + M + V + + G+ D
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVSGYAQFGRAKETID 460
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSG 420
K+L K G ++ S S +G
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 39/347 (11%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H ++T D N + S + + S S+ ++F + + ++ LI Y +
Sbjct: 293 QIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM-TCKNIISWTALIVGYGQN 351
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
CS E++++F EM + G+ PD++T V+ +C + G H L GL +
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C I+ A +F+EM D VSW+++++G+ + + +F +M
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVK 471
Query: 200 PNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ VT + ++SAC+ V G S HS +G+ T ++++YS+ G +++A +
Sbjct: 472 PDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEE 531
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
Q + PD+I + +LSAC G
Sbjct: 532 FIK----------------------------------QMPMHPDAIGWGTLLSACRLRGD 557
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++ GK + + + P Y + M G E + R M
Sbjct: 558 MEIGKWAAENLLEIDPQNPA--SYVLLCSMHAAKGQWNEVAQLRRGM 602
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 73/343 (21%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+ LP PP + N L+ AY K + ++FD M P+ FTY
Sbjct: 31 ILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMP----HPNLFTY----------- 75
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
N LL A + + +A+F M RD+VS++++IA
Sbjct: 76 ------------------------NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIA 111
Query: 176 GFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
GF S + A++V+ + A+ S P+ +T+ ++V A ++L + G+ H + G
Sbjct: 112 GFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGF 171
Query: 234 ELDVALGTALVEMYSK-------------------------------CGHVEKAFKVFNL 262
+ +G+ LV+MY+K C VE+A ++F +
Sbjct: 172 GANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEV 231
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +++ +WT M++G NG + A+ +F +M G+ D +F +IL+AC L +++G
Sbjct: 232 MTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
K + R + +VDM + I+ A + R M
Sbjct: 292 KQIHAYIIRT-RYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 234/427 (54%), Gaps = 35/427 (8%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF +P + ++ T+I Y + E++ ++ ML++GL + +V ACG
Sbjct: 486 ARELFERVP-DKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACG 544
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC----------------------- 149
R IG G +H ++ K G D +I T++ YAAC
Sbjct: 545 RLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNA 604
Query: 150 --------KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
+ +D A+ +F++MP RDV SWS+MI+G+ D AL++FH+M + PN
Sbjct: 605 LVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPN 664
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
VT+VS+ SA +L ++ G H Y + L+ L AL++MY+KCG + A + FN
Sbjct: 665 EVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFN 724
Query: 262 LMREK--NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+R+K ++ W +I GLA +G + + +F+ M + +KP+ I+F +LSAC H GLV
Sbjct: 725 QIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLV 784
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+ G+ F M YN++P ++HYGCMVD+LGRAGL+EEA +IR+MP + + VI + L
Sbjct: 785 EPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLA 844
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR HG V + + + L L P G VL +++ + +G W+ + + AI + + +
Sbjct: 845 ACRTHGDV-NIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMER 903
Query: 440 VPGCSWV 446
+PGCS V
Sbjct: 904 MPGCSGV 910
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 182/439 (41%), Gaps = 94/439 (21%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPL------------ 66
QLH+L LK L NT I + I + + S+ + LF+ P P+
Sbjct: 289 RQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKA 348
Query: 67 ------------------FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+Y T+I + C E++++F +M G+ P++ T V+
Sbjct: 349 GQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVI 408
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI---------------- 152
AC I +H++ K+ ++ + L+R Y C +
Sbjct: 409 YACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLV 468
Query: 153 ---------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
D+A+ +FE +P +DV+SW +MI G++ + +AL ++ M +
Sbjct: 469 SWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSG 528
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG------ 251
+ N + +V+LVSAC L + G +H V G + + T ++ Y+ CG
Sbjct: 529 LALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLAC 588
Query: 252 -------------------------HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
V++A K+F+ M E+++ SW+ MISG A +
Sbjct: 589 LQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRI 648
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF KM+ +G+KP+ ++ ++ SA + LG + EG+ + E +I ++
Sbjct: 649 ALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGR-WAHEYICNESIPLNDNLRAALI 707
Query: 347 DMLGRAGLIEEAYHIIRNM 365
DM + G I A +
Sbjct: 708 DMYAKCGSINSALQFFNQI 726
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 75/306 (24%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYA-------------ACK---------------- 150
G +HSL+ K+GL S+ +I N+L+ MYA AC
Sbjct: 288 GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347
Query: 151 --EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
++D A+ +F+ MP + VS+++MI G V + +AL+VF M+ PN +TLV++
Sbjct: 348 AGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNV 407
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+ AC+ + IH+ A+ +E V + T L+ Y C V +A ++F+ M E NL
Sbjct: 408 IYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNL 467
Query: 269 QSWTIMISGLADNGRGNYAISLFAK-------------------------------MIQT 297
SW +M++G A G + A LF + M+++
Sbjct: 468 VSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRS 527
Query: 298 GLKPDSISFSAILSACSHLGLVDEG--------KNYFDEMARVYN-IKPTMEHYGCMVDM 348
GL + I ++SAC L + +G K FD YN I+ T+ H+ M
Sbjct: 528 GLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFD----CYNFIQTTIIHFYAACGM 583
Query: 349 LGRAGL 354
+ A L
Sbjct: 584 MDLACL 589
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 97/268 (36%), Gaps = 75/268 (27%)
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VS+SS P + +F +L N + LVS + C+S G +HS
Sbjct: 237 VSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCSS---SSQGRQLHS 293
Query: 227 YAVVNGLELDVALGTALVEMYS-------------------------------KCGHVEK 255
+ GL + + +L+ MY+ K G ++
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A K+F++M +K S+T MI GL N A+ +F M G+ P+ ++ ++ ACSH
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSH 413
Query: 316 LGL-----------------------------------VDEGKNYFDEMARVYNIKPTME 340
G V E + FD M V +
Sbjct: 414 FGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEV-----NLV 468
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ M++ +AGL++ A + +P +
Sbjct: 469 SWNVMLNGYAKAGLVDMARELFERVPDK 496
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 244/437 (55%), Gaps = 44/437 (10%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-------DNFTYPFVVKACGRCLL 116
P L +N +I+AYA+ +++ ++ ML+ P D FTYPF++KACG
Sbjct: 75 PNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW------ 170
+ +G VH+ + + G DS + N+L+ MY ++ +A VF+EM RDVVSW
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 171 -------------------------SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
++M++G+ A+ F M+ P+ V++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
V+++ AC L + G I++Y +G+ + AL+EMY+KCG +++A ++F+ M +
Sbjct: 255 VAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKN 324
K++ SW+ +I GLA +GR + A+ LF +M + G ++P+ I+F +LSACS+ GLVDEG +
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+FD M VY ++P +EHYGC+VD+LGR+G I A ++R+MP +A + S L ACR+H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 385 GQVLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
G V D + + L++LEP+ N V+ A+V + + W A AI + + K PG
Sbjct: 435 GDV---DTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 443 CSWVKVNDGSAEEMSKE 459
CS ++V + E ++ E
Sbjct: 492 CSLIEVGNVVREFVAGE 508
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H + V + L T +V + + V A +VF +R+ NL MI A N +
Sbjct: 33 VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQ 92
Query: 284 GNYAISLFAKMIQTGLKP-------DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
A++++ +M++ P D ++ +L AC ++ GK + R
Sbjct: 93 HRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR-SGCD 151
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +++M RAG + A+ + M
Sbjct: 152 SSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 263/453 (58%), Gaps = 15/453 (3%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPV 62
I L+Q ++ L ++H + + L H+ I ++ F S+S SL + + LF+ +
Sbjct: 7 ILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQME- 65
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGG 121
P A+N++IR +A++S I++I +++M+ PD FT+ FV+KAC R
Sbjct: 66 CPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCK 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH + + G D+D + L++ Y+A + +A+ VF++MP RD+V+W++MI+ F
Sbjct: 126 EVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQG 185
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL+ +++M+ N + TLV L+S+C L + G +H +A NGL+ + +G
Sbjct: 186 LHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGN 245
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++MY+KCG +++A +F+ M+ K++ +W MI G +GRG+ AI F +M++ ++P
Sbjct: 246 ALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQP 305
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++F +L CSH GLV EG YF+ M+ + +KP ++HYGC+VD+ GRAG +++A I
Sbjct: 306 NPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEI 365
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYVLAASVSS 417
+ N + ++V+ R LG+C+ H V +G++ + ELGA + +L A++ +
Sbjct: 366 VSN-SSHNDSVLWRILLGSCKIHKNV-----TIGEIAMNRLSELGATSAGDCILLATIYA 419
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ A + I +G PG SW+++ +
Sbjct: 420 GEKDKAGVARMRKMIKSQGKKTTPGWSWIEIGE 452
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 231/387 (59%), Gaps = 4/387 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I A A+ + ++ +LF+ M ++ ++P+++T ++ AC + G S+H
Sbjct: 423 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 482
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K ++ ++ + L MY C + A+ +FE P RD++SW++MIA +V +
Sbjct: 483 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHK 542
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG--LELDVALGTAL 243
AL +FHRM ++ PNSVT+++++S+ T L + G+S+H+Y G L LD++L A
Sbjct: 543 ALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF 601
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ MY++CG ++ A +F + ++N+ SW MI+G NGRG+ A+ F++M++ G +P+
Sbjct: 602 ITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNG 661
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F ++LSACSH G ++ G F M + +N+ P + HY C+VD+L R G I+EA I
Sbjct: 662 VTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFID 721
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP EP+A + R+ L +CR + K L KLEP NYVL ++V + +G W
Sbjct: 722 SMPIEPDASVWRALLSSCRAYSDAKQAKTIFEK-LDKLEPMNAGNYVLLSNVYATAGLWL 780
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +KGL K PG SW+ V +
Sbjct: 781 EVRRIRTWLKEKGLRKPPGISWIIVKN 807
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 184/351 (52%), Gaps = 9/351 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLP-VTPPLFAYNTLIRAYAK 78
Q+H L +K + I++ + + S + SL + LF ++P PL +N++I AYA
Sbjct: 276 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPL--WNSMISAYAA 333
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI--GGSVHSLIFKVGLDSDK 136
C E++ LF M G++ D T ++ C L G+ G S+H+ + K G+ D
Sbjct: 334 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE-LASGLLKGKSLHAHVIKSGMRIDA 392
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+GN LL MY ++ + +F+ M D++SW++MI + A ++F RM+ +
Sbjct: 393 SLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRES 452
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
PNS T++S+++AC + + G SIH Y + + +E++ L TAL +MY CG A
Sbjct: 453 EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATA 512
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+F +++L SW MI+ N + + A+ LF +MI +P+S++ +LS+ +HL
Sbjct: 513 RDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHL 571
Query: 317 GLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ +G++ + R +++ + + M R G ++ A +I + +P
Sbjct: 572 ATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 163/316 (51%), Gaps = 7/316 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
++L + VH + +F D N + + I L + LF+ L V + ++
Sbjct: 170 LRLGRGVHGYCLRNGMF-----DSNPHVATALIGFYLRFDMRVLPLLFD-LMVVRNIVSW 223
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N +I Y ++++LF +ML ++ D T V+AC + +G +H L K
Sbjct: 224 NAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK 283
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
D YI N LL MY+ ++ + +FE +P RD W+SMI+ + A +A+ +
Sbjct: 284 FEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDL 343
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F RM+ + T+V ++S C L + + G+S+H++ + +G+ +D +LG AL+ MY+
Sbjct: 344 FIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYT 403
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+ VE K+F+ M+ ++ SW MI LA N A LF +M ++ +KP+S + +
Sbjct: 404 ELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIIS 463
Query: 309 ILSACSHLGLVDEGKN 324
IL+AC + +D G++
Sbjct: 464 ILAACEDVTCLDFGRS 479
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 4/313 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++I+ A + + +M G+ P+N T P V+KAC + G S+H I
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
L D +G ++ Y C ++ A+ VF+ M RDVV W++M+ G+V +A+
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMY 247
+ M N PNS T+V+L+ AC +R G +H Y + NG+ + + + TAL+ Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+ + +F+LM +N+ SW MISG D G A+ LF +M+ +K D ++
Sbjct: 201 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+ AC+ LG + GK ++A + + +++M G +E ++ + ++P
Sbjct: 260 VAVQACAELGSLKLGKQ-IHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 318
Query: 368 EPNAVILRSFLGA 380
+A + S + A
Sbjct: 319 R-DAPLWNSMISA 330
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ Y C E++ L EM + LRP++ T ++ AC + +G VH
Sbjct: 122 WNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 181
Query: 129 KVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ G+ DS+ ++ L+ Y ++ V +F+ M VR++VSW++MI+G+ AL
Sbjct: 182 RNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKAL 240
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F +M + + VT++ V AC L +++ G+ IH A+ D+ + AL+ MY
Sbjct: 241 ELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMY 300
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
S G +E + ++F + ++ W MIS A G A+ LF +M G+K D +
Sbjct: 301 SNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVV 360
Query: 308 AILSACSHLG 317
+LS C L
Sbjct: 361 IMLSMCEELA 370
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%)
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
++ ++D W+S+I + L + +M+ PN+ TL ++ AC + V
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+SIH L DV +GTA+V+ Y KCG VE A VF+ M ++++ W M+ G
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
G A+ L +M + L+P+S + A+L AC
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLAC 164
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 253/442 (57%), Gaps = 4/442 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K LD + + + + + + S+ + +F+ +P + ++ T+I +A+
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGHAQN 498
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+++LF E+ G+ D ++ AC LI +HS I + GL SD +
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQ 557
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N ++ +Y C +D A +FE + +DVVSW+SMI+ +V ++AL++FH MK
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVE 617
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+S++LVS++SA SL ++ G+ IH + + G L+ +L + LV+MY++CG +EK+ V
Sbjct: 618 PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNV 677
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN +R K+L WT MI+ +G G AI LF +M + PD I+F A+L ACSH GL+
Sbjct: 678 FNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLM 737
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG+ + + M Y ++P EHY C+VD+LGRA +EEAY ++ M EP A + + LG
Sbjct: 738 NEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLG 797
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H L + + LL+++PE NYVL ++V + W E+ + + GL K
Sbjct: 798 ACQIHSNK-ELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKK 856
Query: 440 VPGCSWVKVNDGSAEEMSKETA 461
PGCSW++V + M+++ +
Sbjct: 857 NPGCSWIEVGNKVHTFMARDKS 878
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 159/274 (58%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ R LF+ +P + ++N++I AY+ SIE+++LF EM K L P+ +T+ ++
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 326
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC I G +H+ + K + ++ N L+ MYA ++ A +F M D +S
Sbjct: 327 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 386
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+SM++GFV +AL+ +H M+ A + P+ V ++S+++A N G IH+YA+
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAM 446
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
NGL+ D+ +G +LV+MY+K ++ +F+ M +K++ SWT +I+G A NG + A+
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 506
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
LF ++ G+ D + S+IL ACS L L+ K
Sbjct: 507 LFREVQLEGIDLDVMMISSILLACSGLKLISSVK 540
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 148/263 (56%), Gaps = 2/263 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P +F +N +I AY + S++L+ EM +G+ D T+P ++KACG
Sbjct: 172 LFDGMP-HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLK 230
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMI 174
G VH L K G S ++ N+++ MY C +++ A+ +F+ MP + DVVSW+SMI
Sbjct: 231 DRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 290
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ + + +AL++F M+ A+ +PN+ T V+ + AC ++ G IH+ + +
Sbjct: 291 SAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYY 350
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++V + AL+ MY++ G + +A +F M + + SW M+SG NG + A+ + +M
Sbjct: 351 INVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEM 410
Query: 295 IQTGLKPDSISFSAILSACSHLG 317
G KPD ++ +I++A + G
Sbjct: 411 RDAGQKPDLVAVISIIAASARSG 433
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 39/329 (11%)
Query: 99 PDNFT----YPFVVKACGRCLLIGIGGSVHS-LIFKVGLDSDKYIGNTLLRMYAACKEID 153
P F+ Y V++ CG + G VH+ +I L + ++ L+ MY C +
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F+ MP + + +W++MI +V P +L+++ M+++ ++ T ++ AC
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWT 272
L + R G +H A+ G V + ++V MY+KC + A ++F+ M EK ++ SW
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---------K 323
MIS + NG+ A+ LF +M + L P++ +F A L AC + +G
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347
Query: 324 NY----------------FDEMARVYNIKPTMEH-----YGCMVDMLGRAGLIEEA---Y 359
+Y F +M NI M+ + M+ + GL EA Y
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVL 388
H +R+ +P+ V + S + A G L
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTL 436
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 223/387 (57%), Gaps = 2/387 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P ++ LI AY ++E+I + +G+RPD+FT V+ AC R + G +V
Sbjct: 4 PSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAV 63
Query: 124 HSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+ + G+ ++ L +Y C E++ A++VF+EM RD V+W +M+ G+ +
Sbjct: 64 WAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGH 123
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
P +AL +F M++ P+ T+V +SACT L + G + + + LGTA
Sbjct: 124 PREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTA 183
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY+KCG +A+ VF M E+++ W MI GL G A +L +M ++G+K +
Sbjct: 184 LIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLN 243
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+F +L +C+H GLV++G+ YF M VY I P +EHYGCMVD+ RAGL+EEA+ +I
Sbjct: 244 DNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLI 303
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+MP NAV+ + LG C+ H + L K L++LEP NYV+ +++ S SG W
Sbjct: 304 GDMPMLANAVVWGALLGGCKIHRNADLAEHAL-KQLIRLEPWNSGNYVMLSNIYSNSGRW 362
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVN 449
+ AA+L + + KG+ KVP SWV+++
Sbjct: 363 EDAAKLRLEMKAKGIEKVPASSWVELD 389
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 12/210 (5%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP VSW+++IA ++ +A+ V R + P+S T V +++AC + ++ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 222 ESIHSYAVV-NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
E++ + A G+ V + TA +++Y KCG +EKA VF+ M+ ++ +W M+ G A
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN-----YFDEMARVYNI 335
NG A+ LF M G KPD + LSAC+ LG +D G+ ++DE+
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLG---- 176
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
P + ++DM + G EA+ + + M
Sbjct: 177 NPVLG--TALIDMYAKCGSTSEAWMVFQQM 204
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/389 (38%), Positives = 220/389 (56%), Gaps = 7/389 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL----IGIGG 121
++ +N L RA A E + L+ +M G D FTY +V+KAC L + G
Sbjct: 144 IYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGK 203
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H+ I + G +++ ++ TLL +YA + A +VF MP ++ VSWS+MIA F +
Sbjct: 204 EIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNE 263
Query: 182 SPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P AL++F M + N PNSVT+V+++ AC L + G+ IH Y + L+ + +
Sbjct: 264 MPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPV 323
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL+ MY +CG V +VF+ M+++++ SW +IS +G G AI +F MI G+
Sbjct: 324 LNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGV 383
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
P ISF +L ACSH GLV+EGK F+ M Y I P MEHY CMVD+LGRA + EA
Sbjct: 384 SPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAI 443
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+I +M EP + S LG+CR H V L + +L +LEP NYVL A + + +
Sbjct: 444 KLIEDMHFEPGPTVWGSLLGSCRIHCNV-ELAERASTVLFELEPRNAGNYVLLADIYAEA 502
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKV 448
W A +M + +GL K+PGCSW++V
Sbjct: 503 KLWSEAKSVMKLLEARGLQKLPGCSWIEV 531
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
P T+ ++ +C + + G VH + G D D ++ L+ MY ID A V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT----S 214
F+E R + W+++ + L ++ +M + T ++ AC S
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ +R G+ IH++ + +G E ++ + T L+++Y+K G V A VF M KN SW+ M
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLK--PDSISFSAILSACSHLGLVDEGKNYFDEMAR- 331
I+ A N A+ LF M+ P+S++ +L AC+ L +++GK + R
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315
Query: 332 -VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +I P + ++ M GR G + + NM
Sbjct: 316 QLDSILPVL---NALITMYGRCGEVLMGQRVFDNM 347
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P T L+ +C ++ G +H V +G + D L T L+ MY + G +++A K
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC--SHL 316
VF+ RE+ + W + LA G G + L+ +M G D +++ +L AC S L
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194
Query: 317 GL--VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + +GK + R + + + ++D+ + G + A + MPT+
Sbjct: 195 SVCPLRKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK 247
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 236/400 (59%), Gaps = 2/400 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SLH+ +F + + + ++N LI + + +++ L+ M +GL PD FT ++
Sbjct: 451 SLHYAEGVFCGME-SKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLL 509
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC R + G +H + + G + D++I +L+ +Y C +I +AK F+ M +++V
Sbjct: 510 SACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLV 569
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W++MI GF + P DAL +FH+M + P+ ++++ + AC+ + +R G+ +H +A
Sbjct: 570 CWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFA 629
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V + L + +L++MY+KCG +E++ +F+ + K +W ++I+G +G G AI
Sbjct: 630 VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAI 689
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF M G +PDS++F A+L+AC+H GLV EG Y +M ++ IKP +EHY C+VDM
Sbjct: 690 ELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDM 749
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + EA ++ +P +P++ I S L +CRN+ + L + + + LL+L P+ N
Sbjct: 750 LGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNY-RDLDIGEKVANKLLELGPDKAEN 808
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
YVL ++ + G WD ++ + + GL K GCSW+++
Sbjct: 809 YVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEI 848
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 186/412 (45%), Gaps = 48/412 (11%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ ++N++I Y+K + +L +M ++ ++ + T V+ C + +H
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423
Query: 125 SLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
+ G + SD+ + N + YA C + A+ VF M + V SW+++I G V P
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL ++ M+ + P+ T+ SL+SAC L ++ G+ IH + NG ELD + +L
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V +Y +CG + A F+ M EKNL W MI+G + N A+ +F +M+ + + PD
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG----CMVDMLGRAGLIEEAY 359
IS L ACS + + GK + +K + + ++DM + G +E++
Sbjct: 604 ISIIGALGACSQVSALRLGKEL-----HCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQ 658
Query: 360 HI----------------------------------IRNMPTEPNAVILRSFLGACRNHG 385
+I ++N P++V + L AC + G
Sbjct: 659 NIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAG 718
Query: 386 QVLYLDDNLGKL--LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
V + LG++ L ++P+L +Y + +G + A EL+ + K
Sbjct: 719 LVAEGLEYLGQMQSLFGIKPKL-EHYACVVDMLGRAGRLNEALELVNELPDK 769
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 14/310 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTS--LDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
I++ + +H+ F+ TS ++ +I+R + + L N LF
Sbjct: 109 IEIGRKIHN-------FISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLF 161
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+N L+ Y + S +++ +F EM+ T PDNFT P V+KAC + +G +VH
Sbjct: 162 LWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGF 221
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K + SD ++GN L+ MY ++ A VF++MP R++VSW+S++ + ++
Sbjct: 222 ALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEES 281
Query: 187 LKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+F + +E P+ T+V+++ C VR G H A+ GL ++ + ++L+
Sbjct: 282 YGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLL 341
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDS 303
+MYSKCG++ +A +F+ EKN+ SW MI G + + A L KM ++ +K +
Sbjct: 342 DMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNE 400
Query: 304 ISFSAILSAC 313
++ +L C
Sbjct: 401 VTLLNVLPVC 410
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLI-FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+++ CG I IG +H+ I +D + L+ MY+ C + VF +
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESI 224
++ W+++++G++ DA+ VF M L P++ TL ++ AC + +VR GE++
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H +A+ + DV +G AL+ MY K G VE A KVF+ M ++NL SW ++ +NG
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 285 NYAISLFAKMIQ--TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ LF ++ GL PD + ++ C+ G V G F +A + ++
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVN 337
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++DM + G + EA + E N + S +G
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDT--NEKNVISWNSMIGG 373
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 252/431 (58%), Gaps = 5/431 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H LK +++ + I + I + + S S ++FN + V + ++N +I +A+
Sbjct: 363 EVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRN-IVSWNAMIANFARN 421
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+++L +M G P+N T+ V+ AC R + +G +H+ I +VG D ++
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L MY+ C +++A+ VF + VRD VS++ +I G+ + ++L++F M+L
Sbjct: 482 NALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMR 540
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ V+ + +VSAC +L +R G+ IH V + + +L+++Y++CG ++ A KV
Sbjct: 541 PDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKV 600
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F ++ K++ SW MI G G + AI+LF M + G++ DS+SF A+LSACSH GL+
Sbjct: 601 FYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLI 660
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++G+ YF M + NI+PT HY CMVD+LGRAGL+EEA +IR + P+ I + LG
Sbjct: 661 EKGRKYFKMMCDL-NIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLG 719
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR HG + L + L +L+P+ Y+L +++ + + WD A ++ + +G K
Sbjct: 720 ACRIHGNI-ELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKK 778
Query: 440 VPGCSWVKVND 450
PGCSWV+V D
Sbjct: 779 NPGCSWVQVGD 789
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 14/322 (4%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLF---NNLPVT 63
+TL Q +K VH LH L + + + IL S H + SL +++ +
Sbjct: 48 DTLSQ-TKQVHAYSLLHGF-----LPRSVSLCASLILQYASFG-HPSNSLLLFQHSVAYS 100
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
F +NTLIRA + + ++ M++ G++PD TYPFV+K C + + G V
Sbjct: 101 RSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H + FK+G D D ++GNTLL Y C A VF+EMP RD VSW+++I
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219
Query: 184 SDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALG 240
+AL F M A P+ VT+VS++ C + +H YA+ G L V +G
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVG 279
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
ALV++Y KCG + + KVF+ + E+N+ SW +I+ + G+ A+ +F MI G++
Sbjct: 280 NALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMR 339
Query: 301 PDSISFSAILSACSHLGLVDEG 322
P+S++ S++L LGL G
Sbjct: 340 PNSVTISSMLPVLGELGLFKLG 361
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 151/266 (56%), Gaps = 1/266 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N +I +++ ++++ +F M+ G+RP++ T ++ G L +G VH
Sbjct: 307 VISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHG 366
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K+ ++SD +I N+L+ MYA +A +F +M VR++VSW++MIA F +
Sbjct: 367 FSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYE 426
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+++ +M+ E+PN+VT +++ AC L + G+ IH+ + G LD+ + AL +
Sbjct: 427 AVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTD 486
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKCG + A VFN+ + S+ I+I G + ++ LF++M G++PD +S
Sbjct: 487 MYSKCGCLNLAQNVFNISVRDEV-SYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVS 545
Query: 306 FSAILSACSHLGLVDEGKNYFDEMAR 331
F ++SAC++L + +GK + R
Sbjct: 546 FMGVVSACANLAFIRQGKEIHGLLVR 571
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 9/312 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGR 113
+F+ +P + ++NT+I + E++ F M+ K G++PD T V+ C
Sbjct: 194 VFDEMPERDKV-SWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAE 252
Query: 114 CLLIGIGGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ VH KVGL +GN L+ +Y C +K VF+E+ R+V+SW++
Sbjct: 253 TEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNA 312
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I F DAL VF M PNSVT+ S++ L + G +H +++
Sbjct: 313 IITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMA 372
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E DV + +L++MY+K G A +FN M +N+ SW MI+ A N A+ L
Sbjct: 373 IESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVR 432
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLG 350
+M G P++++F+ +L AC+ LG ++ GK + AR+ + +++ + + DM
Sbjct: 433 QMQAKGETPNNVTFTNVLPACARLGFLNVGK---EIHARIIRVGSSLDLFVSNALTDMYS 489
Query: 351 RAGLIEEAYHII 362
+ G + A ++
Sbjct: 490 KCGCLNLAQNVF 501
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 233/439 (53%), Gaps = 48/439 (10%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ + + ++N LI Y + +IE+++ F M + G +PD T VV AC
Sbjct: 210 ARRVFDGME-EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKY-----IGNTLLRMYAACKEIDVAKAVFEEMPVR-- 165
G +H+ + K SDK+ +GN L+ MYA C ++ A+ VF+ MPVR
Sbjct: 269 TLAAFKEGVQIHARVVK----SDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNA 324
Query: 166 -----------------------------DVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
D+VSW+++IAG+ +AL +F +K
Sbjct: 325 VSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE 384
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL------ELDVALGTALVEMYSKC 250
+ P T +L++A +L ++ G HS+ V +G E D+ +G +L++MY KC
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKC 444
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G VE+ +VF M EK+ SW MI G A NG G A+ LF KM+++G KPD ++ L
Sbjct: 445 GSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTL 504
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
ACSH GLV+EG+ YF M + + + P +HY CMVD+LGRAG +EEA +I +MP +P+
Sbjct: 505 CACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPD 564
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
AV+ S L AC+ H + L + + + +++P YVL A++ S G W A +
Sbjct: 565 AVVWSSLLSACKVHRNIT-LGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRK 623
Query: 431 AINQKGLNKVPGCSWVKVN 449
+ ++G+ K PGCSW+ +
Sbjct: 624 LMRRRGVVKQPGCSWIDIQ 642
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 32/282 (11%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM------------------- 162
SVH + + + +I N L+ +Y C +D A+ VF+ M
Sbjct: 45 SVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWG 104
Query: 163 ------------PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
P +D SW+SMIAGF D +AL F RM + N + S +S
Sbjct: 105 FVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLS 164
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC+ L +++ G IH + LDV +G+ L++ YSKCG V A +VF+ M EKN+ S
Sbjct: 165 ACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVS 224
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W +I+ NG A+ F +M + G KPD ++ ++++SAC+ L EG +
Sbjct: 225 WNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVV 284
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
+ + + +VDM + G + EA + MP NAV
Sbjct: 285 KSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR-NAV 325
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 163/347 (46%), Gaps = 38/347 (10%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P ++N++I +A+ E++ F M + +++++ + AC R
Sbjct: 112 LFSLMPEKDQC-SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLK 170
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H LI K D ++G+ L+ Y+ C + A+ VF+ M ++VVSW+ +I
Sbjct: 171 DLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLIT 230
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLE 234
+ +AL+ F RM P+ VTL S+VSAC +L + G IH+ V +
Sbjct: 231 CYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFR 290
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM------------------------------- 263
D+ LG ALV+MY+KCG V +A VF+ M
Sbjct: 291 NDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATI 350
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
++K++ SW +I+G NG A+ LF + + + P +F +L+A ++L ++ G+
Sbjct: 351 KQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGR 410
Query: 324 NYFDEMAR-----VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ + +P + ++DM + G +EE + NM
Sbjct: 411 QAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 53/303 (17%)
Query: 47 SISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPF 106
S S+ RS+F + + ++N LI Y + + E++ LF + + + P ++T+
Sbjct: 337 SASVKAARSMFATIK-QKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGN 395
Query: 107 VVKACGRCLLIGIGGSVHSLI------FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
++ A + +G HS + F+ G + D ++GN+L+ MY C ++ VFE
Sbjct: 396 LLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFE 455
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
M +D VSW++MI G+ +AL++F +M + E P+ VT++ + AC
Sbjct: 456 NMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCAC-------- 507
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK-VFNLMREKNL----QSWTIMI 275
S G VE+ + F++ +E L +T M+
Sbjct: 508 ---------------------------SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMV 540
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
L G A L M + +PD++ +S++LSAC + GK Y E +++ I
Sbjct: 541 DLLGRAGCLEEAKDLIESMPK---QPDAVVWSSLLSACKVHRNITLGK-YVAE--KIFEI 594
Query: 336 KPT 338
PT
Sbjct: 595 DPT 597
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+S L+ C L + R S+H + +V + L+++Y KCG+++ A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 261 N-------------------------------LMREKNLQSWTIMISGLADNGRGNYAIS 289
+ LM EK+ SW MI+G A + R A+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDM 348
F +M + + SF + LSACS L + G +++ Y++ M ++D
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG--SGLIDF 200
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL-LKLEPELGA 407
+ GL+ A + M E N V + +G + + G++ L +P+
Sbjct: 201 YSKCGLVGCARRVFDGM-EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPD--- 256
Query: 408 NYVLAASVSS 417
LA+ VS+
Sbjct: 257 EVTLASVVSA 266
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 250/468 (53%), Gaps = 45/468 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLH----FTRSLFNNLPVTPPLFAYNTLIRAY 76
Q H+L L+ L N +SR I T S+S H + LF LP P F YNTL +A+
Sbjct: 20 QQHSLLLRLGLSTNNHAMSR-IFTFCSLSKHGDINYALKLFTTLP-NPDTFLYNTLFKAF 77
Query: 77 AKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
S + S+ + ML+ + P+ FT+P +++AC L +H+ + K G D
Sbjct: 78 FSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACK---LEEEAKQLHAHVLKFGFGGD 134
Query: 136 KYIGNTLLRMYAACKEIDVAKAVF-------------------------------EEMPV 164
Y N L+ +Y A +D A+ VF E MP
Sbjct: 135 TYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPC 194
Query: 165 R-DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP-NSVTLVSLVSACTSLINVRAGE 222
+ + VSW++MIA FV + +A +F RM++ + + +++SACT + + G
Sbjct: 195 KKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGM 254
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IH Y G+ LD L T +++MY KCG ++KAF VF ++ K + SW MI G A +G
Sbjct: 255 WIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHG 314
Query: 283 RGNYAISLFAKMIQTGL-KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+G AI LF +M + + PDSI+F +L+AC+H GLV+EG YF M V+ I PT EH
Sbjct: 315 KGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEH 374
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCMVD+L RAG +EEA +I MP P+A +L + LGACR HG L L + +G +++L
Sbjct: 375 YGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGN-LELGEEVGNRVIEL 433
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+PE YV+ ++ + G W+ A + ++ +G+ K PG S +++
Sbjct: 434 DPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEME 481
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 238/399 (59%), Gaps = 5/399 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + V L ++NT++ + K + + ++F +M + G D T ++ ACG
Sbjct: 179 RVVFDRMLVRD-LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237
Query: 114 CLLIGIGGSVHSLIFKVGLDS---DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
+ + +G +H + + G + ++ N+++ MY C+ + A+ +FE + V+DVVSW
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+S+I+G+ C AL++F RM + P+ VT++S+++AC + +R G ++ SY V
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVK 357
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G ++V +GTAL+ MY+ CG + A +VF+ M EKNL + T+M++G +GRG AIS+
Sbjct: 358 RGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISI 417
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F +M+ G+ PD F+A+LSACSH GLVDEGK F +M R Y+++P HY C+VD+LG
Sbjct: 418 FYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLG 477
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG ++EAY +I NM +PN + + L ACR H V + K L +L P+ + YV
Sbjct: 478 RAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQK-LFELNPDGVSGYV 536
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + W+ + + ++ L K P S+V++N
Sbjct: 537 CLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELN 575
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 222/433 (51%), Gaps = 20/433 (4%)
Query: 13 SKTVHHLHQLHT-LFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLFAYN 70
SK++ QLH + +L NT + ++ ++ + + + +F+ + V F +N
Sbjct: 35 SKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQI-VLKNSFLWN 93
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
++IR YA + ++ L+ +ML G +PDNFTYPFV+KACG LL +G VH+L+
Sbjct: 94 SMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVG 153
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL+ D Y+GN++L MY +++ A+ VF+ M VRD+ SW++M++GFV A +VF
Sbjct: 154 GLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVF 213
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG---TALVEMY 247
M+ + TL++L+SAC +++++ G+ IH Y V NG V G ++++MY
Sbjct: 214 GDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMY 273
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
C V A K+F +R K++ SW +ISG G A+ LF +M+ G PD ++
Sbjct: 274 CNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVI 333
Query: 308 AILSACSHLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
++L+AC+ + + G ++Y + V N+ ++ M G + A +
Sbjct: 334 SVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTA----LIGMYANCGSLVCACRVFDE 389
Query: 365 MPTE--PNAVILRSFLGA-CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
MP + P ++ + G R + + LGK + P+ G + S S SG
Sbjct: 390 MPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGK---GVTPDEGI-FTAVLSACSHSGL 445
Query: 422 WDTAAELMVAINQ 434
D E+ + +
Sbjct: 446 VDEGKEIFYKMTR 458
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 249/433 (57%), Gaps = 16/433 (3%)
Query: 24 TLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSI 83
++++ SL H + RF S +F+ + V + ++ +I Y +
Sbjct: 68 NIYVENSLVHFYSVCKRFGDAS---------RVFDEMLVRD-VVSWTGVISGYVRAGLFD 117
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
E++ LF L+ + P+ T+ V+ ACGR + +G +H L FK + N L+
Sbjct: 118 EAVGLF---LRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALM 174
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
MY C + AK VF+E+ +D+VSW+S+I+G V C+ P +AL++F M+ + P+ +
Sbjct: 175 DMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGI 234
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
L S++SAC L + G +H + ++ D+ +GTA+V+MY+KCG +E + ++FN M
Sbjct: 235 ILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGM 294
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
KN+ +W +++GLA +G + LF +M++ G++P+ ++F AIL+AC H GLV+EG+
Sbjct: 295 PHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGR 354
Query: 324 NYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF+ M + YN+ P +EHYGCMVD+L RA L++EA + + MP P+ I+ + L AC+
Sbjct: 355 QYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACK 414
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+G + L + + +L+ YVL +++ +++ WD + + +KG+ K PG
Sbjct: 415 ENGNTELPQEILDRFV-ELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPG 473
Query: 443 CSWVKVNDGSAEE 455
+ +++ DG A E
Sbjct: 474 STVIEL-DGKAHE 485
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 175/318 (55%), Gaps = 5/318 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N L+ YA + ++ ++K G PD FT+P V+K+C + + IG G VH +I
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G + Y+ N+L+ Y+ CK A VF+EM VRDVVSW+ +I+G+V +A+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F RM + PN+ T VS++ AC + G+ IH + + + + + AL++MY
Sbjct: 122 LFLRMDV---EPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + A +VF+ + EK++ SWT +ISGL A+ LF M +G++PD I ++
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSAC+ LG +D G+ + + R IK ++ MVDM + G IE + I MP +
Sbjct: 239 VLSACARLGALDYGRWVHEHIDR-KAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 369 PNAVILRSFLGACRNHGQ 386
N + + L HG
Sbjct: 298 -NVLTWNALLNGLAMHGH 314
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 254/470 (54%), Gaps = 24/470 (5%)
Query: 3 SRHI-ETLIQLSKTVHH---LHQLHTLFLKTSLDHNTCIISRFILTSLSI---------- 48
+RH+ +L++ S + H H LH ++ LD + I + I T
Sbjct: 109 NRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVF 168
Query: 49 ------SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDN 101
+ + +F+ +PV + ++NT+I +A+ +E++ + EM K G L+PD+
Sbjct: 169 PKRGESGIDCVKKVFDMMPVRD-VVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDS 227
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
FT ++ + + G +H + G D D +IG++L+ MYA C ++ + F
Sbjct: 228 FTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYI 287
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
+P +D +SW+S+IAG V L F RM N P +V+ S++ AC L + G
Sbjct: 288 LPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLG 347
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+H V G + + + ++LV+MY+KCG+++ A VF+ + ++++ +WT +I G A +
Sbjct: 348 RQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMH 407
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G A+SLF M++ G++P ++F A+L+ACSH GLVDEG YF+ M R + I P +EH
Sbjct: 408 GHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEH 467
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP-TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
Y + D+LGRAG +EEAY I NM +P + L ACR H V + L KLL
Sbjct: 468 YAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSV 527
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+GA YVL +++ S + W AA L + + +KGL K P CSW++V +
Sbjct: 528 DSENMGA-YVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGN 576
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 199/394 (50%), Gaps = 20/394 (5%)
Query: 12 LSKTVHHLHQLHTLFLKTSLD-HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
LS + QLH +KT H+ I+ + ++L++ H + LFN+LP PP A++
Sbjct: 21 LSVSTRQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNLLQH-SLHLFNSLPSPPPPLAWS 79
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
++I+ Y S S F+ M + P+ +P ++KA + S+H+ ++
Sbjct: 80 SIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRL 139
Query: 131 GLDSDKYIGNTLLRMYAACKE---------------IDVAKAVFEEMPVRDVVSWSSMIA 175
GLDSD YI N L+ YA ID K VF+ MPVRDVVSW+++IA
Sbjct: 140 GLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIA 199
Query: 176 GFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF +AL + M K P+S TL S++ ++V G+ IH YAV NG +
Sbjct: 200 GFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFD 259
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
DV +G++L++MY+KC +E + + F ++ K+ SW +I+G NG + + F +M
Sbjct: 260 GDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRM 319
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
++ +KP ++SFS+++ AC+HL + G+ + R+ +VDM + G
Sbjct: 320 LKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRL-GFDDNEFIASSLVDMYAKCGN 378
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
I+ A ++ + + V + + C HG L
Sbjct: 379 IKMARYVFDRIDKR-DMVAWTAIIMGCAMHGHAL 411
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 274/524 (52%), Gaps = 83/524 (15%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSI--SLHFTRSLFNNLPV 62
+ L QLS +V + Q L K+ L ++ +IS+ I SLS SL + +++F + +
Sbjct: 116 LSKLQQLS-SVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAM 174
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR--------- 113
P F NT+IRAYAK+ I++I L++ M + ++ D+FTYPF +KAC R
Sbjct: 175 DNP-FVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGDI 233
Query: 114 -CLLIGI---GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE-------- 161
C + I G +H +F++GLD D +I N+L+ +Y+ C +D+A+ VF+E
Sbjct: 234 KCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTITS 293
Query: 162 -----------------------MPVRDVVSWSSMIAGFVACDSPSDA------------ 186
MP ++VVSW+ +IA ++ DA
Sbjct: 294 WNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQEMPERDA 353
Query: 187 -------------------LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
L +F M++AN +TL+S++ AC + G IH
Sbjct: 354 VSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIGRKIHLS 413
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+++ L ALV+MY+KCGH+ A++VF+ ++ K++ W MI LA +G A
Sbjct: 414 LKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEA 473
Query: 288 ISLFAKMIQT--GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
+ LF+ M + G +P+ ++F +L ACSH GLVDEG+ +F+ M Y I P ++HYGCM
Sbjct: 474 LRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYGCM 533
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VD+L R GL++EA+H+I+ MP E N+V+ R+ LGACR H V +++ + L K+EP
Sbjct: 534 VDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQ-LGKMEPLR 592
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+YVL +++ + + W+ + + G+ K PG S + +
Sbjct: 593 DGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIGIR 636
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 228/416 (54%), Gaps = 37/416 (8%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG---RCLLIGIGGSVH 124
A+N LI + + ES F +M + G P TY V+ ACG R +L+G+ VH
Sbjct: 89 AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGM--QVH 146
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACK-------------------------------EID 153
+ G+ D + N L+ MYA C ++D
Sbjct: 147 GRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVD 206
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F+ MP RD VSW++MI G+V +AL++F M+ +N S + T+VS+++AC
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L + GE + Y G+++D +G AL++MYSKCG +E+A VF M ++ +WT
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTA 326
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+I GLA NG AI +F +MI+ PD ++F +L+AC+H GLVD+G+ +F M Y
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY 386
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
NI P + HYGC++D+LGRAG I EA I MP PN+ I + L ACR HG + +
Sbjct: 387 NIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNS-EIGEL 445
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + LL+L+PE Y+L +++ + W+ L AI +KG+ K PGCS ++++
Sbjct: 446 VAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMD 501
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 154/326 (47%), Gaps = 55/326 (16%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS--------VHSLIFKVGLDSD 135
+++ + ML G RPD +T+P ++KA R GGS VH+ + ++G+ +
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVAR----AAGGSGSAAPARAVHAHVVRLGMGRN 57
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ ++L+ Y A + A+A+ E V+W+++I+G ++ F M
Sbjct: 58 AHVASSLVAAYTAGGDGAAARALVGECDT--PVAWNALISGHNRGGRFGESCGSFVDMAR 115
Query: 196 ANESPNSVTLVSLVSAC-TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
A +P VT VS++SAC +V G +H V +G+ D+ + ALV+MY++C +
Sbjct: 116 AGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMG 175
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNG-------------------------------R 283
A+KVF+ M+ +++ SWT ++SGLA G R
Sbjct: 176 SAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAAR 235
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY----NIKPTM 339
A+ +F +M + + D + ++++AC+ LG ++ G E RVY IK
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-----EWVRVYMSRQGIKMDA 290
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G IE A + + M
Sbjct: 291 FVGNALIDMYSKCGSIERALDVFKGM 316
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ +P + ++ +I Y + E++++F EM + + D FT V+ AC
Sbjct: 208 ARDLFDRMPERDTV-SWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + +G V + + G+ D ++GN L+ MY+ C I+ A VF+ M RD +W++
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTA 326
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+I G +A+++FHRM +E+P+ VT + +++ACT
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACT 367
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 249/468 (53%), Gaps = 41/468 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L K+ + I S + + S +++ + +F+ + + ++N+LI + +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQN 231
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
++E++ +F ML++ + PD T V+ AC I +G VH + K L +D +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDV------------------------------- 167
N + MYA C I A+ +F+ MP+R+V
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+++IAG+ +AL +F +K + P + +++ AC L + G H +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 228 AVVNGL------ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +G E D+ +G +L++MY KCG VE+ + VF M E++ SW MI G A N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G GN A+ LF +M+++G KPD I+ +LSAC H G V+EG++YF M R + + P +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y CMVD+LGRAG +EEA +I MP +P++VI S L AC+ H + L + + LL++
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT-LGKYVAEKLLEV 590
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
EP YVL +++ + G W+ + ++ ++G+ K PGCSW+K+
Sbjct: 591 EPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 48/353 (13%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
SLF ++P +N+++ +A+ E++ F M K G + +++ V+ AC
Sbjct: 107 SLFRSMPERDQC-TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G VHSLI K SD YIG+ L+ MY+ C ++ A+ VF+EM R+VVSW+S+I
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-L 233
F +AL VF M + P+ VTL S++SAC SL ++ G+ +H V N L
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFN-------------------------------L 262
D+ L A V+MY+KC +++A +F+
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M E+N+ SW +I+G NG A+SLF + + + P SF+ IL AC+ L + G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 323 KNYFDEMARVYNIKPTMEHY----------GCMVDMLGRAGLIEEAYHIIRNM 365
A V+ +K + ++DM + G +EE Y + R M
Sbjct: 406 MQ-----AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 31/275 (11%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEI------------------------------ 152
VH+ + K G ++ +I N L+ Y+ C +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 153 -DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
D A ++F MP RD +W+SM++GF D +AL F M N + S++SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L ++ G +HS + DV +G+ALV+MYSKCG+V A +VF+ M ++N+ SW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I+ NG A+ +F M+++ ++PD ++ ++++SAC+ L + G+ + +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ + VDM + I+EA I +MP
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 45/257 (17%)
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ SP + L S + + S I VR +H+ + +G ++ + L++ YSKCG +E
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRY---VHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 255 KAFKVFNLMREKNLQ-------------------------------SWTIMISGLADNGR 283
+VF+ M ++N+ +W M+SG A + R
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY- 342
A+ FA M + G + SF+++LSACS L +++G +A+ P +
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK----SPFLSDVY 188
Query: 343 --GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
+VDM + G + +A + M + N V S + +G + + L +
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEM-GDRNVVSWNSLITCFEQNGPAV---EALDVFQMM 244
Query: 401 LEPELGANYVLAASVSS 417
LE + + V ASV S
Sbjct: 245 LESRVEPDEVTLASVIS 261
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 263/453 (58%), Gaps = 15/453 (3%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPV 62
I L+Q ++ L ++H + + L H+ I ++ F S+S SL + + LF+ +
Sbjct: 7 ILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQME- 65
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGG 121
P A+N++IR +A++S I++I +++M+ PD FT+ FV+KAC R
Sbjct: 66 CPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCK 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH + + G D+D + L++ Y+A + +A+ VF++MP RD+V+W++MI+ F
Sbjct: 126 EVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQG 185
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL+ +++M+ N + TLV L+S+C L + G +H +A NGL+ + +G
Sbjct: 186 LHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGN 245
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++MY+KCG +++A +F+ M+ K++ +W MI G +GRG+ AI F +M++ ++P
Sbjct: 246 ALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQP 305
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++F +L CSH GLV EG YF+ M+ + +KP ++HYGC+VD+ GRAG +++A I
Sbjct: 306 NPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEI 365
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYVLAASVSS 417
+ N + ++V+ R LG+C+ H V +G++ + ELGA + +L A++ +
Sbjct: 366 VSN-SSHNDSVLWRILLGSCKIHKNV-----TIGEIAMNRLSELGATSAGDCILLATIYA 419
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ A + I +G PG SW+++ +
Sbjct: 420 GEKDKAGVARMRKMIKSQGKKTTPGWSWIEIGE 452
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 249/448 (55%), Gaps = 22/448 (4%)
Query: 19 LHQLHTLFLKTS--LDHNTCIISRFIL------TSLSISLHFTRSLFNNLPVTPPLFAYN 70
L QLH + +K L + ++R + L + R +F+ +P + YN
Sbjct: 44 LAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYN 103
Query: 71 TLIRAYAKTSCSIESIK----LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
TL+R YA+ + +F M++ G+ PD +T+ ++KAC G H +
Sbjct: 104 TLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGV 163
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G +Y+ TL+ MYA C ++ A+ +F+ M VVS+++MI V P +A
Sbjct: 164 AVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEA 223
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F M+ P SVTL+S++SAC L + G IH Y L+ V + TAL++M
Sbjct: 224 LVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDM 283
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG +E A VF M ++ Q+W++M+ A++G G AIS+F +M + G+KPD ++F
Sbjct: 284 YAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTF 343
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH G+V EG YFD M R Y I ++HYGC+ D+L R+G +E AY I +P
Sbjct: 344 LGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELP 402
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNW 422
+P A++ R+ L AC HG V ++GK +L+L+ G +YV+ +++ + +G W
Sbjct: 403 IKPTAILWRTLLSACAGHGDV-----DMGKRVFERILELDDSHGGDYVIFSNLCANTGRW 457
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +++KG+ KVPGCS +++++
Sbjct: 458 EEMNMVRKLMSEKGVVKVPGCSSIEIDN 485
>gi|413942039|gb|AFW74688.1| hypothetical protein ZEAMMB73_905859 [Zea mays]
Length = 514
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 250/454 (55%), Gaps = 16/454 (3%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFA 68
I +S LH L LK+ + + + L R +F+ P L
Sbjct: 15 ISVSGGARAAQTLHPLALKSGRASEARVATALAVAYARWGLVAHARRVFDEAP-RRDLVL 73
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK------------ACGRCLL 116
YN ++ YA + E+ LF ++G+ PD FT+ +++ A LL
Sbjct: 74 YNAMVSCYASHGLAREAWALFAAARRSGIAPDGFTFSALLRPPPRRGRHPTAGAVDDGLL 133
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ +G HSL+ ++GL +D + LL MYA C +D A+ VF+ M VR+VVSW++++
Sbjct: 134 LRMGALAHSLVLRLGLLADVVVATALLDMYAKCGRVDEARWVFDAMAVRNVVSWNAIVVC 193
Query: 177 FVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ DA+++F M + + P+ +TL S++S+C S+ +H+YA+ G
Sbjct: 194 YGRVGGGKDAVELFRWMLRDGSCCPDELTLASVLSSCASVAAANEATQVHAYAIKRGFHR 253
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ + A++ Y K G +A ++F ++ + ++ +W+ M+S LA G A+ +F +M+
Sbjct: 254 FLQVANAVITAYGKTGFAREAGQMFAMICDPDVVTWSCMVSSLAYLGLCKDAVHVFERML 313
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
Q G++PDS++F +LSACSH GLV+EG +YF MAR YNI P +H C+VD+LGRAG I
Sbjct: 314 QQGVQPDSVAFLGVLSACSHAGLVEEGLHYFLMMARGYNIDPNSQHLACLVDLLGRAGRI 373
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
++AY+I+ + E NA I+ +FLGAC+ G++ L LL LEP NY+L ++
Sbjct: 374 QDAYNIVIKLSCENNADIVGAFLGACKLRGKI-ELAKWAADRLLCLEPSEAVNYLLMSNA 432
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ +G W+ AE+ + + +KVPGCSW++V
Sbjct: 433 FAAAGAWNELAEVRSVMRHRCGSKVPGCSWIEVG 466
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 255/461 (55%), Gaps = 14/461 (3%)
Query: 4 RHIETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLS----ISLHFTRSL 56
RH L++L + ++ + QLH L+ + ++++ +L L+ L + ++
Sbjct: 17 RHCVALLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAV 76
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
+ P F+ NT++R A +S ++ L L PD TYP +++AC R L
Sbjct: 77 LTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRLAP---PDTHTYPPLLQACARLLS 133
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RDVVSWSSMI 174
+ G +H+ K GL + ++ N+L+ +Y AC + A VF+E+PV R++VSW+SM+
Sbjct: 134 LRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSML 193
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF A P++ L +F M N P+ T+VS+++A + + G +H Y GL
Sbjct: 194 NGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLV 253
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +G AL+++Y+KCG VE A +VF M + + SWT +I GLA NG G A+ LF
Sbjct: 254 ENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGI 313
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + L P I+ +L ACSH GLVD+G YF+ M YNI P +EH GCMVD+LGRAG
Sbjct: 314 MEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAG 373
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
++EAY I MP EPNAV+ R+ LGAC H + L L + L++L+P +YVL +
Sbjct: 374 KVKEAYDYILTMPLEPNAVVWRTLLGACAMHKK-LELGEAAWARLVELDPGHSGDYVLLS 432
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
++ + G W L + + G+ K PG S V++ + E
Sbjct: 433 NLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYE 473
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 244/448 (54%), Gaps = 21/448 (4%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH------FTRSLFNNLPVTPPL 66
S +HH +HT +K D S F++ +L+ + + LF + + P +
Sbjct: 238 SSLLHHGKAIHTQTIKQGFDE-----SSFVINTLATMYNKCGKPDYVMRLFEKMRM-PDV 291
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++ TLI Y + +++ F M K+ + P+ +T+ V+ +C G +H
Sbjct: 292 VSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGH 351
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ ++GL + + N+++ +Y+ C + A VF + +D++SWS++I+ + +A
Sbjct: 352 VLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEA 411
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
M+ PN L S++S C S+ + G+ +H++ + G++ + + +A++ M
Sbjct: 412 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISM 471
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG V++A K+FN M+ ++ SWT MI+G A++G AI+LF K+ GLKPD + F
Sbjct: 472 YSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMF 531
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L+AC+H G+VD G YF M VY I P+ EHYGC++D+L RAG + EA HIIR+MP
Sbjct: 532 IGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMP 591
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNW 422
+ V+ + L ACR HG V + G+ LL+L+P ++ A++ + G W
Sbjct: 592 FHTDDVVWSTLLRACRVHGDV-----DRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRW 646
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
AA + + KG+ K G SWV VND
Sbjct: 647 KEAAHIRKLMKSKGVIKERGWSWVNVND 674
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 175/345 (50%), Gaps = 3/345 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
LH +K+ L H+ + S I + + + +F + +T + ++ +I
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKM-MTRNVVSWTAIIAGLVHAG 204
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++E + F EM ++ + D+ T+ +KA L+ G ++H+ K G D ++ N
Sbjct: 205 YNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVIN 264
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
TL MY C + D +FE+M + DVVSW+++I+ +V A++ F RM+ + SP
Sbjct: 265 TLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSP 324
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N T +++S+C +L + GE IH + + GL +++ +++ +YSKCG ++ A VF
Sbjct: 325 NKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVF 384
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ + K++ SW+ +IS + G A + M + G KP+ + S++LS C + L++
Sbjct: 385 HGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLE 444
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+GK + + M H ++ M + G ++EA I M
Sbjct: 445 QGKQVHAHLLCIGIDHEAMVH-SAIISMYSKCGSVQEASKIFNGM 488
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 2/280 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R +F+ + + ++ TLI Y S S E++ LF M + G + D F +KAC
Sbjct: 77 RYMFDKMTHRDEI-SWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACA 135
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ I G +H K GL ++ + L+ MY +I+ VFE+M R+VVSW++
Sbjct: 136 LGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTA 195
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IAG V + L F M + +S T + A + G++IH+ + G
Sbjct: 196 IIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQG 255
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + L MY+KCG + ++F MR ++ SWT +IS G +A+ F
Sbjct: 256 FDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFK 315
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+M ++ + P+ +F+A++S+C++L G+ + R+
Sbjct: 316 RMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRL 355
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 46/296 (15%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+ L+ ++ A+ +F++M RD +SW+++IAG+V +AL +F M +
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
++S+ + AC +N+ GE +H ++V +GL V + +AL++MY K G +E+ +
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M +N+ SWT +I+GL G + F++M ++ + DS +F+ L A + L
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 319 VDEG--------KNYFDEMARVYNIKPTMEHYGC--------------MVDMLGRAGLIE 356
+ G K FDE + V N TM + C M D++ LI
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATM-YNKCGKPDYVMRLFEKMRMPDVVSWTTLIS 299
Query: 357 ------------EAYHIIRNMPTEPNAVILRSFLGACRN----------HGQVLYL 390
EA+ +R PN + + +C N HG VL L
Sbjct: 300 TYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRL 355
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 241/441 (54%), Gaps = 4/441 (0%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
LS+ V QLH L + + + +R + L + + R +F+ +P +F +N
Sbjct: 80 LSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWN 139
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
LIRAYA+ +I+L+ ML G ++PDNFTYP V+KAC L + G VH + +
Sbjct: 140 VLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMR 199
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+D ++ L+ MYA C +D A AVF + +RD W+SMIA P++AL +
Sbjct: 200 TNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTL 259
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
M +P TLVS +SA + G +H Y G L T+L++MY+K
Sbjct: 260 CRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAK 319
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSA 308
G V A +F + + L SW MI G +G ++A LF++M + + PD I+F
Sbjct: 320 SGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVG 379
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSAC+H G+V E K FD M VY+IKPT++HY C+VD+LG +G +EA +I+ M +
Sbjct: 380 VLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVK 439
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P++ I + L C+ H V + L K L++LEPE NYVL +++ + SG W+ AA +
Sbjct: 440 PDSGIWGALLNGCKIHKNVELAELALQK-LIELEPEDAGNYVLLSNIYAESGKWEEAARV 498
Query: 429 MVAINQKGLNKVPGCSWVKVN 449
+ +GL K+ CSW+++
Sbjct: 499 RKLMTNRGLKKIIACSWIELK 519
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++++C + G +H+ + G D + L+ +YA+C + +A+ VF+EMP
Sbjct: 71 YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130
Query: 164 VR-DVVSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRA 220
+ +V W+ +I + A D P +A +R LA S P++ T ++ AC +L+++ A
Sbjct: 131 NQGNVFLWNVLIRAY-ARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSA 189
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H + DV + T L++MY+KCG +++A+ VFN ++ W MI+
Sbjct: 190 GREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQ 249
Query: 281 NGRGNYAISLFAKMIQTGLKP 301
NGR A++L M G+ P
Sbjct: 250 NGRPAEALTLCRNMAAEGIAP 270
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +++ +C VR G +H+ +V+G LD L T LV++Y+ CGHV A +VF
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 261 NLM-REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGL 318
+ M + N+ W ++I A +G AI L+ M+ G +KPD+ ++ +L AC+ L
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ G+ D RV + + C ++DM + G ++EA+ + N T +A + S
Sbjct: 187 LSAGREVHD---RVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVF-NDTTIRDAAVWNS 242
Query: 377 FLGACRNHGQ 386
+ AC +G+
Sbjct: 243 MIAACGQNGR 252
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 257/451 (56%), Gaps = 17/451 (3%)
Query: 21 QLHTLFLKTSL---DHNTCIISRFILTSLSISLHFTRSLFNNLPVTP----PLFAYNTLI 73
QLH L+T L T + L ++S+ H ++ ++ TP F N+++
Sbjct: 40 QLHAHLLRTGLLIFSPVTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHYLPSTFQCNSIL 99
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
RA + S ++++ + G R + FT ++K RC L +H+ + G
Sbjct: 100 RALSDPS---DALRFLCRVRALGRRGNAFTLAILLKP--RCSL-AHARQLHANVVAEGHL 153
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
D + +L+R YA + D A+ +F+EMPVRD V+W+ +I + DALK+F M
Sbjct: 154 RDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEM 213
Query: 194 --KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
K + P+ VT + L+ AC+SL + GE + +YA +G ++ + +L+ MY +CG
Sbjct: 214 RGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCG 273
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
V+KA++VF+ +K++ +WT MISGLA NG GN AIS+F +MI++ + PD +F+ +LS
Sbjct: 274 CVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLS 333
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN-MPTEPN 370
ACSH GLVDEG +FD M Y +KP + HYGC+VD++GRAGL++EAY + N M P+
Sbjct: 334 ACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPD 393
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
A I R+ LGACR HG V + +G L++L+ + +YVL + + G W +E+
Sbjct: 394 ATIWRTLLGACRIHGHVDLGERVIGN-LIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRK 452
Query: 431 AINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ ++G+ PGC+ V+ N E ++ + A
Sbjct: 453 LMQEEGIQTTPGCTTVEHNGTVHEFIADDDA 483
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 237/431 (54%), Gaps = 8/431 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
H + L D N I S I + + +L R LF+ L + P + ++I A +
Sbjct: 183 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEPDAICWTSIISALTRND 241
Query: 81 CSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+++ F M + G+ PD FT+ V+ ACG + G VH+ + G + +
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 301
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
++L+ MY C + ++ +F+ MP+++ VSWS+++ G+ +++F +M E
Sbjct: 302 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EK 357
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ +++ C L VR G+ +H + G DV + +ALV++Y+KCG +E A +
Sbjct: 358 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 417
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M +NL +W MI G A NGRG A+ +F +M++ G+KPD ISF IL ACSH GLV
Sbjct: 418 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 477
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG+ YF M + Y IK +EHY CMVD+LGRAGL+EEA +I ++ + + LG
Sbjct: 478 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 537
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC + + + K +++LEP+ +YVL A+V G W+ A + + +G+NK
Sbjct: 538 ACTTCTN-YEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK 596
Query: 440 VPGCSWVKVND 450
+PG SW++ +
Sbjct: 597 MPGKSWIETKN 607
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 191/379 (50%), Gaps = 22/379 (5%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF--------TRSLFNNLPVTPPLFA 68
+H Q+H +K+ L+ + RF+ SL ++L+F TR +F+ L V + +
Sbjct: 76 NHGLQIHAHVIKSGLEFD-----RFVGNSL-LTLYFKLGTDFPETRKVFDGLFV-KDVIS 128
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++I Y + + S++LF +ML G+ P+ FT V+KAC + +G H ++
Sbjct: 129 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVL 188
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G DS+ I + L+ M+ +D A+ +F+E+ D + W+S+I+ D +AL+
Sbjct: 189 GRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALR 248
Query: 189 VFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F+ M+ + P+ T ++++AC +L ++ G+ +H+ + G +V + ++LV+MY
Sbjct: 249 FFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMY 308
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG V ++ ++F+ M KN SW+ ++ G NG I +F KM K D F
Sbjct: 309 GKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFG 364
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
IL C+ L V +GK + R + + +VD+ + G IE A I MP
Sbjct: 365 TILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPV 423
Query: 368 EPNAVILRSFLGACRNHGQ 386
N + S +G +G+
Sbjct: 424 R-NLITWNSMIGGFAQNGR 441
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 154/283 (54%), Gaps = 5/283 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEM 162
Y +++ C + L G +H+ + K GL+ D+++GN+LL +Y + + VF+ +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
V+DV+SW+SMI+G+V P ++L++F +M PN+ TL +++ AC+ L +++ G
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
H + G + + + +AL++M+ + ++ A ++F+ + E + WT +IS L N
Sbjct: 182 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 241
Query: 283 RGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+ A+ F M + G+ PD +F +L+AC +LG + +GK ++ +
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVV 300
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA-CRN 383
+VDM G+ G + E+ I MP + N+V + LG C+N
Sbjct: 301 ESSLVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALLGGYCQN 342
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 5/199 (2%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
S AL++ + S V SL+ CT ++ G IH++ + +GLE D +G +L
Sbjct: 41 SGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSL 100
Query: 244 VEMYSKCG-HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
+ +Y K G + KVF+ + K++ SWT MISG G+ ++ LF KM+ G++P+
Sbjct: 101 LTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPN 160
Query: 303 SISFSAILSACSHLGLVDEGKNYFD-EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ + SA++ ACS LG + G+ + + R ++ + ++DM GR +++A +
Sbjct: 161 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIAS--ALIDMHGRNCALDDARQL 218
Query: 362 IRNMPTEPNAVILRSFLGA 380
+ EP+A+ S + A
Sbjct: 219 FDEL-LEPDAICWTSIISA 236
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 249/448 (55%), Gaps = 22/448 (4%)
Query: 19 LHQLHTLFLKTS--LDHNTCIISRFIL------TSLSISLHFTRSLFNNLPVTPPLFAYN 70
L QLH + +K L + ++R + L + R +F+ +P + YN
Sbjct: 44 LAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYN 103
Query: 71 TLIRAYAKTSCSIESIK----LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
TL+R YA+ + +F M++ G+ PD +T+ ++KAC G H +
Sbjct: 104 TLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGV 163
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G +Y+ TL+ MYA C ++ A+ +F+ M VVS+++MI V P +A
Sbjct: 164 AVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEA 223
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F M+ P SVTL+S++SAC L + G IH Y L+ V + TAL++M
Sbjct: 224 LVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDM 283
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG +E A VF M ++ Q+W++M+ A++G G AIS+F +M + G+KPD ++F
Sbjct: 284 YAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTF 343
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+L ACSH G+V EG YFD M R Y I ++HYGC+ D+L R+G +E AY I +P
Sbjct: 344 LGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELP 402
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNW 422
+P A++ R+ L AC HG V ++GK +L+L+ G +YV+ +++ + +G W
Sbjct: 403 IKPTAILWRTLLSACAGHGDV-----DMGKRVFERILELDDSHGGDYVIFSNLCANTGRW 457
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +++KG+ KVPGCS +++++
Sbjct: 458 EEMNMVRKLMSEKGVVKVPGCSSIEIDN 485
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 253/452 (55%), Gaps = 5/452 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
+R I ++Q ++ L ++H+ + L H+ I + RF S++ SL + LF++
Sbjct: 5 ARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIG 118
P +N LIR ++ +S + SI ++ ML + + RPD FT+ F +K+C R I
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+H + + G D + +L+R Y+A +++A VF+EMPVRD+VSW+ MI F
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ AL ++ RM +S TLV+L+S+C + + G +H A E V
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ AL++MY+KCG +E A VFN MR++++ +W MI G +G G AIS F KM+ +G
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++P++I+F +L CSH GLV EG +F+ M+ +++ P ++HYGCMVD+ GRAG +E +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+I + V+ R+ LG+C+ H + L L + K L++LE +YVL S+ S
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIH-RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + A + I L VPG SW+++ D
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGD 455
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 239/424 (56%), Gaps = 35/424 (8%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N+++ + + +++ LF+ M G+ P+ T V+ AC + + + +G V
Sbjct: 308 IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCD 367
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF-------V 178
I + + + + N + M+ C E+++A+ +F+ M RDVVSW+++I G+ +
Sbjct: 368 YIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 179 ACD------------------------SPSDALKVFHRMKLANES--PNSVTLVSLVSAC 212
A D P +AL +F ++L P+ VTL+S +SAC
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L + GE IH Y ++L+ L T+L++MYSK G VEKA +VF+ + K++ W+
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MI+GLA +GRG AI LF M +T +KP+S++F+ +L ACSH GLVDEGK FDEM RV
Sbjct: 548 AMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERV 607
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
Y + P +HY CMVD+LGRAG +EEA I MP P+A + + LGAC HG L L +
Sbjct: 608 YGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN-LELAE 666
Query: 393 NLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
LL++EP YVL +++ + +G+W+ +EL + GL K GCS +++ DG+
Sbjct: 667 KACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEI-DGT 725
Query: 453 AEEM 456
E
Sbjct: 726 VHEF 729
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 216/420 (51%), Gaps = 48/420 (11%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVTP 64
L Q + L Q+H L+T+ H+ S +S S +L + R +F+ +P P
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFS-ALDYARKVFDQIP-QP 202
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACG--RCLLIGIGG 121
L+++N LIRA A +S I+S+ +F ML + P+ FT+P ++KA RC L+G
Sbjct: 203 NLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVG--K 260
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE--EMPVRDVVSWSSMIAGFVA 179
+VH + K D ++ N+L+ YA+C +D+A VFE E +D+VSW+SM+ GFV
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P AL +F RM+ PN+VT+VS++SAC +N+ G + Y N + +++ +
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT--------------------------- 272
A ++M+ KCG VE A +F+ M ++++ SWT
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440
Query: 273 ----IMISGLADNGRGNYAISLFA--KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF 326
++ISG +GR A+++F ++ ++G +PD ++ + LSAC+ LG +D G+ +
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE-WI 499
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ I+ ++DM ++G +E+A + ++ + + + + + HG+
Sbjct: 500 HGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMHGR 558
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM--LKTGLRPDNFTYPFVVKAC 111
R +F+++P + A+N LI Y ++ E++ +F E+ K+G RPD T + AC
Sbjct: 429 RDIFDSMP-RKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ + IG +H I K + ++ + +L+ MY+ +++ A VF + +DV WS
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI-HSYAVV 230
+MIAG A+++F M+ PNSVT +L+ AC+ V G+ + V
Sbjct: 548 AMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERV 607
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
G+ + +V++ + GH+E+A K M
Sbjct: 608 YGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGM 640
>gi|357511223|ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500915|gb|AES82118.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 467
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 252/450 (56%), Gaps = 3/450 (0%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNN 59
+ R ++ L +T H+ Q+ + +L +T I I S S +L ++ LF +
Sbjct: 8 LAERVVKLLKSFCRTQIHVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPLFTH 67
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L P +F +N+LIRA++ + + L+ M K + P+NFT+PF+ K+
Sbjct: 68 LIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQ 127
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
V++ + K+G +D Y+ N+LL +YA+ +++ + +F+EMP RDVVSW+ MI G+
Sbjct: 128 SQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRN 187
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+DAL VF +M+ PN VT+V+ +SAC S + G I NG ELDV L
Sbjct: 188 GGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVIL 247
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
GTAL++MY KCG VE+ KVF M+EKN+ + ++I GLA A+ F +M G+
Sbjct: 248 GTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGV 307
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+ D ++ +LSACSH GLV++G+ F + Y P ++HY CMVD+L RAG ++EA
Sbjct: 308 RADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEA 367
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+ II+ MP EP A + S L ++ + + + K L++LEP A YV +++ +
Sbjct: 368 FDIIKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFAATK-LVELEPYNTAYYVQLSNLYAE 426
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+G W + + ++GL K GCS V+V
Sbjct: 427 AGRWSDVERIRGMMKERGLTKDLGCSSVEV 456
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 271/522 (51%), Gaps = 81/522 (15%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSI--SLHFTRSLFNN 59
+R L Q K + L Q+H + L N ++ I + SLS+ +L + LF+
Sbjct: 12 NRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDE 71
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + N ++R A++ +++ L+ EM K G+ PD +T+ FV+KAC +
Sbjct: 72 IP-KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------------- 151
G + H + + G ++Y+ N L+ +A C +
Sbjct: 131 GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK 190
Query: 152 ---IDVAKAVFEEMPV-------------------------------RDVVSWSSMIAGF 177
ID A +F+EMP +DVV+W++MI+G+
Sbjct: 191 RGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY-----AVVNG 232
V C P +AL +F M+ A E P+ VT++SL+SAC L ++ G+ +H Y +V +
Sbjct: 251 VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + + AL++MY+KCG +++A +VF +++++L +W +I GLA + +I +F
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + + P+ ++F ++ ACSH G VDEG+ YF M +YNI+P ++HYGCMVDMLGRA
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGAN 408
G +EEA+ + +M EPNA++ R+ LGAC+ +G V LGK LL + + +
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNV-----ELGKYANEKLLSMRKDESGD 484
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + +G WD ++ + + K G S ++ +D
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 257/451 (56%), Gaps = 17/451 (3%)
Query: 21 QLHTLFLKTSL---DHNTCIISRFILTSLSISLHFTRSLFNNLPVTP----PLFAYNTLI 73
QLH L+T L T + L ++S+ H ++ ++ TP F N+++
Sbjct: 54 QLHAHLLRTGLLIFSPVTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHYLPSTFQCNSIL 113
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
RA + S ++++ + G R + FT ++K RC L +H+ + G
Sbjct: 114 RALSDPS---DALRFLCRVRALGRRGNAFTLAILLKP--RCSL-AHARQLHANVVAEGHL 167
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
D + +L+R YA + D A+ +F+EMPVRD V+W+ +I + DALK+F M
Sbjct: 168 RDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEM 227
Query: 194 --KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
K + P+ VT + L+ AC+SL + GE + +YA +G ++ + +L+ MY +CG
Sbjct: 228 RGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCG 287
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
V+KA++VF+ +K++ +WT MISGLA NG GN AIS+F +MI++ + PD +F+ +LS
Sbjct: 288 CVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLS 347
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN-MPTEPN 370
ACSH GLVDEG +FD M Y +KP + HYGC+VD++GRAGL++EAY + N M P+
Sbjct: 348 ACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPD 407
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
A I R+ LGACR HG V + +G L++L+ + +YVL + + G W +E+
Sbjct: 408 ATIWRTLLGACRIHGHVDLGERVIGN-LIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRK 466
Query: 431 AINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ ++G+ PGC+ V+ N E ++ + A
Sbjct: 467 LMQEEGIQTTPGCTTVEHNGTVHEFIADDDA 497
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 237/396 (59%), Gaps = 10/396 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
LF+ +P + + T++ A A E +++ M + G+ P+ +T+ V+ ACG
Sbjct: 137 LFDRMP-ERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACG-- 193
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G+ ++H+ KVGLDSD ++ ++L+ Y ++D + VF+EM RD+V W+S+I
Sbjct: 194 -TPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSII 252
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
AGF A+++F RMK A S N TL S++ ACT ++ + AG +H++ V E
Sbjct: 253 AGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAH--VLKYE 310
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ L AL++MY KCG +E A +F+ M ++++ SW+ MISGLA NG+ A+ +F M
Sbjct: 311 RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLM 370
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G+ P+ I+ +L ACSH GLV++G YF M +++ I+P EH+ CMVD+LGRAG
Sbjct: 371 KSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGK 430
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP-ELGANYVLAA 413
++EA IR+M EP+AVI R+ LGACR H + L + +LKLEP + GA +L+
Sbjct: 431 LDEAVEFIRDMNLEPDAVIWRTLLGACRMH-KSGNLAAYAAREILKLEPDDQGARVLLSN 489
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + L W A + A+ +G+ K PG SW+++
Sbjct: 490 TYADLR-QWTDAEKSWKAMRDRGMKKEPGRSWIELE 524
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 98 RPDNFTYPFVVKACGRCLLIGIGGSVHSLI--------FKVGLDSDKYIGNTLLRMYAAC 149
R D + +VK C R G G +H + + G ++ N+L+ MYA
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS-PSDALKVFHRMKLANESPNSVTLVSL 208
+D A +F+ MP R+VV+W++++A D +AL+ M +PN+ T S+
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+ AC + + A +H+ V GL+ DV + ++L++ Y K G ++ +VF+ M ++L
Sbjct: 189 LGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
W +I+G A +G G AI LF +M G + + +++L AC+ + +++ G+
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVH-- 303
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
A V + + + ++DM + G +E+A + MP
Sbjct: 304 -AHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQR 342
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 237/428 (55%), Gaps = 3/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + +F+ +P P ++ LI AY
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMP-HPSTVSWTALITAYMDA 150
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ + G+RPD+FT V+ AC R + G +V + G+ ++
Sbjct: 151 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVA 210
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+ A+ VF++M +D V+W +M+ G+ + P +AL +F M+
Sbjct: 211 TAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 270
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + +SACT L + G + + LGTAL++MY+KCG +A+ V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 330
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR+K++ W MI GL G A +L +M ++G+K + +F +L +C+H GL+
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I P +EHYGC+VD+L RAGL++EA+ +I +MP NAVIL + LG
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 450
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H L +++ L++LEP NYV+ +++ S G W+ AA+L + + +KG+ K
Sbjct: 451 GCKIHRNA-ELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEK 509
Query: 440 VPGCSWVK 447
VP CSWV+
Sbjct: 510 VPACSWVE 517
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 147/286 (51%), Gaps = 16/286 (5%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T+P +K+ R + G +H+ K+ ++ ++ +LL +YA C + A+
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF+EMP VSW+++I ++ +A+ V P+S T V +++AC + +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE++ A G+ V + TA V++Y KCG + KA +VF+ MR+K+ +W M+ G
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY-----FDEMARV 332
A NG A+ LF M G++PD + + LSAC+ LG +D G+ +DE
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE---- 303
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
+ P + ++DM + G EA+ + + M + NA+IL
Sbjct: 304 FLDNPVLG--TALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMIL 347
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 246/476 (51%), Gaps = 35/476 (7%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNL 60
I R I L+ KT HL ++H FL+ L + I++ F+ S+ + + LF +
Sbjct: 7 IERKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHT 66
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P + +N +I+A++ S F M + PD +T + K+ +G
Sbjct: 67 H-NPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLG 125
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
G VH+ + ++G + L +YA+C+ + A VF+EM DVV W+ MI GF
Sbjct: 126 GCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKM 185
Query: 181 DSPSDALKVFHRMK-------------------------LANE------SPNSVTLVSLV 209
+KVF +MK L NE P+ +LV+++
Sbjct: 186 GDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVL 245
Query: 210 SACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
C L V GE IHSYA G D + +G +LV+ Y KCG+++ A+ +FN M KN+
Sbjct: 246 PVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNV 305
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
SW MISGLA NG G ++LF +M+ G +P+ +F +L+ C+H+GLVD G++ F
Sbjct: 306 VSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFAS 365
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
M+ + + P +EHYGC+VD+LGR G + EA +I +MP +P A + + L ACR +G
Sbjct: 366 MSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGD-R 424
Query: 389 YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ +N K L++LEP NYVL ++V + G WD ++ V + G+ KVPG S
Sbjct: 425 EIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 237/428 (55%), Gaps = 3/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + +F+ +P P ++ LI AY
Sbjct: 139 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMP-HPSTVSWTALITAYMDA 197
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ + G+RPD+FT V+ AC R + G +V + G+ ++
Sbjct: 198 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVA 257
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+ A+ VF++M +D V+W +M+ G+ + P +AL +F M+
Sbjct: 258 TAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 317
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + +SACT L + G + + LGTAL++MY+KCG +A+ V
Sbjct: 318 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 377
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR+K++ W MI GL G A +L +M ++G+K + +F +L +C+H GL+
Sbjct: 378 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 437
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I P +EHYGC+VD+L RAGL++EA+ +I +MP NAVIL + LG
Sbjct: 438 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 497
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H L +++ L++LEP NYV+ +++ S G W+ AA+L + + +KG+ K
Sbjct: 498 GCKIHRNA-ELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEK 556
Query: 440 VPGCSWVK 447
VP CSWV+
Sbjct: 557 VPACSWVE 564
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 12/284 (4%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T+P +K+ R + G +H+ K+ ++ ++ +LL +YA C + A+
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF+EMP VSW+++I ++ +A+ V P+S T V +++AC + +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE++ A G+ V + TA V++Y KCG + KA +VF+ MR+K+ +W M+ G
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
A NG A+ LF M G++PD + + LSAC+ LG +D G+ + R+ +
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGR----QAIRMVDWDE 350
Query: 338 TMEHY---GCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
+++ ++DM + G EA+ + + M + NA+IL
Sbjct: 351 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMIL 394
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 43/471 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH +K L N + + + + SL + R +F+ +F++N +I Y +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMISGYNRM 214
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
ESI+L EM + + P + T V+ AC + + VH + + + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 140 NTLLRMYAACKEIDVA-------------------------------KAVFEEMPVRDVV 168
N L+ YAAC E+D+A + F++MPVRD +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI G++ +++L++F M+ A P+ T+VS+++AC L ++ GE I +Y
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
N ++ DV +G AL++MY KCG EKA KVF+ M +++ +WT M+ GLA+NG+G AI
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I++ +LSAC+H G+VD+ + +F +M + I+P++ HYGCMVDM
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
LGRAGL++EAY I+R MP PN+++ + LGA R H D+ + +L +L+LEP+
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-----DEPMAELAAKKILELEPD 569
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
GA Y L ++ + W E+ I + K PG S ++VN G A E
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVN-GFAHE 619
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 44/401 (10%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNN 59
SR I +++ + KT QLH+ + + N + F + L + + LF
Sbjct: 35 SRFI-SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR-CLLIG 118
+P P + +N +I+ ++K C E ++L+ MLK G+ PD+ T+PF++ R +
Sbjct: 94 IP-EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H + K GL S+ Y+ N L++MY+ C +D+A+ VF+ DV SW+ MI+G+
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+++++ M+ SP SVTL+ ++SAC+ + + + +H Y E +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREK----------------NLQ------------- 269
L ALV Y+ CG ++ A ++F M+ + NL+
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 270 --SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KN 324
SWTIMI G G N ++ +F +M G+ PD + ++L+AC+HLG ++ G K
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
Y D+ IK + ++DM + G E+A + +M
Sbjct: 393 YIDK----NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 237/431 (54%), Gaps = 8/431 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
H + L D N I S I + + +L R LF+ L + P + ++I A +
Sbjct: 242 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEPDAICWTSIISALTRND 300
Query: 81 CSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+++ F M + G+ PD FT+ V+ ACG + G VH+ + G + +
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 360
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
++L+ MY C + ++ +F+ MP+++ VSWS+++ G+ +++F +M E
Sbjct: 361 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EK 416
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ +++ C L VR G+ +H + G DV + +ALV++Y+KCG +E A +
Sbjct: 417 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 476
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M +NL +W MI G A NGRG A+ +F +M++ G+KPD ISF IL ACSH GLV
Sbjct: 477 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 536
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG+ YF M + Y IK +EHY CMVD+LGRAGL+EEA +I ++ + + LG
Sbjct: 537 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 596
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC + + + K +++LEP+ +YVL A+V G W+ A + + +G+NK
Sbjct: 597 ACTTCTN-YEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK 655
Query: 440 VPGCSWVKVND 450
+PG SW++ +
Sbjct: 656 MPGKSWIETKN 666
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 191/379 (50%), Gaps = 22/379 (5%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF--------TRSLFNNLPVTPPLFA 68
+H Q+H +K+ L+ + RF+ SL ++L+F TR +F+ L V + +
Sbjct: 135 NHGLQIHAHVIKSGLEFD-----RFVGNSL-LTLYFKLGTDFPETRKVFDGLFVKD-VIS 187
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++I Y + + S++LF +ML G+ P+ FT V+KAC + +G H ++
Sbjct: 188 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVL 247
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G DS+ I + L+ M+ +D A+ +F+E+ D + W+S+I+ D +AL+
Sbjct: 248 GRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALR 307
Query: 189 VFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F+ M+ + P+ T ++++AC +L ++ G+ +H+ + G +V + ++LV+MY
Sbjct: 308 FFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMY 367
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG V ++ ++F+ M KN SW+ ++ G NG I +F KM K D F
Sbjct: 368 GKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFG 423
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
IL C+ L V +GK + R + + +VD+ + G IE A I MP
Sbjct: 424 TILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPV 482
Query: 368 EPNAVILRSFLGACRNHGQ 386
N + S +G +G+
Sbjct: 483 R-NLITWNSMIGGFAQNGR 500
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 154/283 (54%), Gaps = 5/283 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEM 162
Y +++ C + L G +H+ + K GL+ D+++GN+LL +Y + + VF+ +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
V+DV+SW+SMI+G+V P ++L++F +M PN+ TL +++ AC+ L +++ G
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
H + G + + + +AL++M+ + ++ A ++F+ + E + WT +IS L N
Sbjct: 241 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 300
Query: 283 RGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+ A+ F M + G+ PD +F +L+AC +LG + +GK ++ +
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVV 359
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA-CRN 383
+VDM G+ G + E+ I MP + N+V + LG C+N
Sbjct: 360 ESSLVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALLGGYCQN 401
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 5/199 (2%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
S AL++ + S V SL+ CT ++ G IH++ + +GLE D +G +L
Sbjct: 100 SGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSL 159
Query: 244 VEMYSKCG-HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
+ +Y K G + KVF+ + K++ SWT MISG G+ ++ LF KM+ G++P+
Sbjct: 160 LTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPN 219
Query: 303 SISFSAILSACSHLGLVDEGKNYFD-EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ + SA++ ACS LG + G+ + + R ++ + ++DM GR +++A +
Sbjct: 220 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIAS--ALIDMHGRNCALDDARQL 277
Query: 362 IRNMPTEPNAVILRSFLGA 380
+ EP+A+ S + A
Sbjct: 278 FDEL-LEPDAICWTSIISA 295
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 250/477 (52%), Gaps = 36/477 (7%)
Query: 2 ISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNL 60
I R+I L+ +T L ++H FL+ L+ I+S F+ S++ + + +F
Sbjct: 8 IERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQT 67
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P + +N +I+ Y+ ES +LF M G+ PD +T ++KAC ++ +G
Sbjct: 68 Q-NPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLG 126
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF--- 177
+H + VG + I ++ +Y++C ++ A+ VF+EM RDV+ W+ MI GF
Sbjct: 127 KCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKR 186
Query: 178 ------------------------VAC----DSPSDALKVFHRMKLANESPNSVTLVSLV 209
++C S+AL +FH M P+ T+V+++
Sbjct: 187 GDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVL 246
Query: 210 SACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
C L +V G+ IHSYA +GL D VA+G ALV+ Y+K G E A +VF+ M KN+
Sbjct: 247 PICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNV 306
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
SW +ISGLA NG G + L +M+ G++P+ +F +LS C+H GL + G+
Sbjct: 307 ISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLAS 366
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP-TEPNAVILRSFLGACRNHGQV 387
M + I+P +EHYGCMVD+LGR+G + EAY +IR MP PNA + S L ACR HG V
Sbjct: 367 MVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDV 426
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
L K L+ LEP NYVL +++ + WD A + + +K + K PG S
Sbjct: 427 -ELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQS 482
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 266/524 (50%), Gaps = 83/524 (15%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L++ K+++ L Q+H+ +K L + +R F S ++++ +F+ +P P
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIP-HP 70
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+F +NT+I+ Y+K S + ++ ML + ++PD FT+PF +K R + + G +
Sbjct: 71 SMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELL 130
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG-------- 176
+ K G DS+ ++ + M++ C +D+A VF+ +VV+W+ M++G
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFK 190
Query: 177 -----------------------------------FVACDSPSDALKVFHRMK------- 194
F AC +A VF MK
Sbjct: 191 ISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSW 250
Query: 195 ------------------------LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
++N P+ T+VS++ AC L + GE + +
Sbjct: 251 TAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDK 310
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
N + D +G ALV+MY KCG+V KA KVF M +K+ +WT MI GLA NG G A+++
Sbjct: 311 NSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAM 370
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F+ MI+ + PD I++ +L AC +VD+GK++F M + IKPT+ HYGCMVD+LG
Sbjct: 371 FSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLG 426
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
G +EEA +I NMP +PN+++ S LGACR H V L D K +L+LEPE GA YV
Sbjct: 427 CVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNV-QLADMAAKQILELEPENGAVYV 485
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
L ++ + S W+ ++ + ++G+ K PGCS +++N E
Sbjct: 486 LLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYE 529
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 243/439 (55%), Gaps = 19/439 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
Q+H +K+ L TC+ + L + + ++ R +F+ +P + + + N +I Y
Sbjct: 571 EQVHCFLVKSGL--QTCLYAGSSLIDMYVKCGAIEAARYVFSCMP-SRSVVSMNAIIAGY 627
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD- 135
A+ +E+I LF EM GL P T+ ++ AC + +G +H LI K GL D
Sbjct: 628 AQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDG 686
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
++G +LL MY + A +F E + + W+++I+G +AL+++ M
Sbjct: 687 DFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMH 746
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
N P+ T S++ AC+ L ++ G IHS GL+ D G+A+V+MY+KCG ++
Sbjct: 747 RNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMK 806
Query: 255 KAFKVFNLMREKN-LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+ +VF M KN + SW MI G A NG A+ +F +M T ++PD ++F +L+AC
Sbjct: 807 SSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTAC 866
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH G V EG+ FD M Y I P ++H CM+D+LGR G ++EA I + EPNA+I
Sbjct: 867 SHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMI 926
Query: 374 LRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
+ LGACR HG DD G+ L++LEPE + YVL +++ + SGNWD +
Sbjct: 927 WATLLGACRIHG-----DDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVR 981
Query: 430 VAINQKGLNKVPGCSWVKV 448
A+ +KGL K+PGCSW+ V
Sbjct: 982 RAMREKGLRKLPGCSWIVV 1000
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 178/326 (54%), Gaps = 14/326 (4%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF +P T + A+N +I + K C IE+I F M KTG++ T V+ A
Sbjct: 305 LFVQMPNTN-VVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G VH+ K GL+S+ Y+G++L+ MYA C++++ AK VF+ + R++V W++M+
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ S +K+F M+ P+ T S++SAC L + G +HS+ + + E
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
++ + LV+MY+KCG +E+A + F +R ++ SW +I G + A ++F +MI
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME---HYG-CMVDMLGR 351
G+ PD +S ++ILS C++L +++G E + +K ++ + G ++DM +
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQG-----EQVHCFLVKSGLQTCLYAGSSLIDMYVK 598
Query: 352 AGLIEEAYHIIRNMPTEP----NAVI 373
G IE A ++ MP+ NA+I
Sbjct: 599 CGAIEAARYVFSCMPSRSVVSMNAII 624
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 163/294 (55%), Gaps = 3/294 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H +K L+ N + S I + + + + +F+ L L +N ++ YA+
Sbjct: 371 VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWNAMLGGYAQNG 429
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+ + +KLF EM G PD FTY ++ AC + +G +HS I K + + ++ N
Sbjct: 430 YASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVEN 489
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
TL+ MYA C ++ A+ FE + RD VSW+++I G+V + +A +F RM L +P
Sbjct: 490 TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAP 549
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ V+L S++S C +L + GE +H + V +GL+ + G++L++MY KCG +E A VF
Sbjct: 550 DEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVF 609
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+ M +++ S +I+G A N AI LF +M GL P I+F+++L AC+
Sbjct: 610 SCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDACT 662
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 42/359 (11%)
Query: 21 QLHTLFLKTSLDHNT-CIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K + N+ C S + S SL R +F+ + V P ++ +I Y +
Sbjct: 203 QVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAGYVQV 261
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++K+F++M K GL PD + V+ AC +G+G
Sbjct: 262 GLPEEALKVFEDMQKLGLVPDQVAFVTVITAC-----VGLG------------------- 297
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
R+ AC +F +MP +VV+W+ MI+G V +A+ F M
Sbjct: 298 ----RLDDACD-------LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVK 346
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
TL S++SA SL + G +H+ A+ GL +V +G++L+ MY+KC +E A KV
Sbjct: 347 STRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKV 406
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ + E+NL W M+ G A NG + + LF++M G PD ++++ILSAC+ L +
Sbjct: 407 FDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECL 466
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA---YHIIRNMPT-EPNAVIL 374
+ G+ + + +N + + +VDM + G +EEA + IRN NA+I+
Sbjct: 467 EMGRQLHSFIIK-HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIV 524
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 114/208 (54%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
++H+ K G S +G+ ++ +YA C ++ A F ++ RD+++W+S+++ +
Sbjct: 102 TIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQG 161
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
S + F ++ SPN T ++S+C L+++ G+ +H + G E +
Sbjct: 162 SLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEG 221
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L++MYSKCG + A K+F+ + + + SWT MI+G G A+ +F M + GL P
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEM 329
D ++F +++AC LG +D+ + F +M
Sbjct: 282 DQVAFVTVITACVGLGRLDDACDLFVQM 309
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 36/274 (13%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
++ F FN L + A+N+++ Y++ + I F + G+ P+ FTY V+
Sbjct: 131 NVEFAAKAFNQLE-KRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVL 189
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+C R + I +G VH + K+G + + + +L+ MY+ C + A+ +F+ + D V
Sbjct: 190 SSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTV 249
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MIAG+V P +ALKVF M+ P+ V V++++AC L
Sbjct: 250 SWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL------------- 296
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
G ++ A +F M N+ +W +MISG G AI
Sbjct: 297 ----------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAI 334
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
F M +TG+K + ++LSA + L ++ G
Sbjct: 335 DFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYG 368
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
R ++IH+ + G LG+A+V++Y+KCG+VE A K FN + ++++ +W ++S
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKP 337
+ G I F + G+ P+ +++ +LS+C+ L +D GK + ++ +
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
E G ++DM + G + +A I + +P+ V
Sbjct: 218 FCE--GSLIDMYSKCGSLVDARKIF-DAVVDPDTV 249
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 245/471 (52%), Gaps = 38/471 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
++ HL QLH +K+ L + SR + + + L + P P F +NT+
Sbjct: 45 SMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHP-RPNSFMWNTV 103
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA + + ++ LF +ML + P+ T P ++ A R G G ++H + K+GL
Sbjct: 104 IRALSDGARPEAAVALFVDMLGSPTPPERRTLPSLLAAYARLGRAGDGAALHGMALKLGL 163
Query: 133 DSDKYIGNTLLRMYAACKE-------------------------------IDVAKAVFEE 161
D Y+ N + MYA+C +D A+AVF+
Sbjct: 164 AGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALARAGRVDEARAVFDG 223
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP R V +WS+M++ + +AL +F M+ PN+ LVS++ C SL + G
Sbjct: 224 MPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCCASLGALDQG 283
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN---LQSWTIMISGL 278
+H+Y +G+ ++ + TALV+MY KCG V+ A +VF+ R + L SW M+ GL
Sbjct: 284 AWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWNSMMQGL 343
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ A++LF+++ GL PD+++F A+L+A H G+ DE + F MA ++++P
Sbjct: 344 AVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPG 403
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHYGC+VD L RAG + EA IR+MP P+A + + L CR HG L +
Sbjct: 404 IEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGDA-ELGARAAREA 462
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++ +P YVLAASV + GN A + + + G+ KVPGCS ++VN
Sbjct: 463 VRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIEVN 513
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 234/398 (58%), Gaps = 3/398 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + L ++NT+I YAK + S + +FD M K GL D T ++ AC
Sbjct: 216 RMVFDRMA-ERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACAD 274
Query: 114 CLLIGIGGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G +H + + + +K+ N+L+ MY C + A+ +FE + +D VSW+S
Sbjct: 275 LKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNS 334
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ ++L++F RM L P+ VT ++++ AC + +R G SIHSY V G
Sbjct: 335 MILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKG 394
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + +GTALV+MYSKCG + + +VF+ M +K+L SW+ M++G +GRG AIS+
Sbjct: 395 FDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILD 454
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M + PD+ F++ILSACSH GLV EGK F +M + YN+KP + HY CMVD+LGRA
Sbjct: 455 GMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRA 514
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G ++EAY IIR M +P + I + L A R H + + + K + + P++ ++Y+
Sbjct: 515 GHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQK-VFDMNPKVVSSYICL 573
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + WD + + +KGL K PGCS++++++
Sbjct: 574 SNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDN 611
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 198/411 (48%), Gaps = 35/411 (8%)
Query: 13 SKTVHHLHQLHTLFLKTS-LDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
+K+ QLH + S L++NT + ++ L + + V F +N
Sbjct: 72 TKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNF 131
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+IR YA ++S+ L+ EML G R DNFTYPFV+KACG LL+ IG VHS + G
Sbjct: 132 MIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
L+SD Y+GN+LL MYA ++ A+ VF+ M RD+ SW++MI+G+ A VF
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFD 251
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMYSKC 250
M A + TL+ L+SAC L V+ G+ IH YAV N + + +L+EMY C
Sbjct: 252 LMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+ A ++F +R K+ SW MI G A NG ++ LF +M G PD ++F A+L
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371
Query: 311 SACSHLGLVDEG--------KNYFDEMA--------------------RVYNIKP--TME 340
AC + + G K FD RV++ P ++
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQVL 388
+ MV G G EA I+ M P+ + S L AC + G V+
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 234/410 (57%), Gaps = 15/410 (3%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ PV L ++N LI Y K ++I+++ M G++PD+ T +V +C
Sbjct: 135 ARKVFDESPVRD-LVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCA 193
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------ 160
+ G + + GL + N L+ M++ C +I A+ +F+
Sbjct: 194 MLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLF 253
Query: 161 -EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+M +DVV W++MI G V DAL +F M+ +N P+ +T++ +SAC+ L +
Sbjct: 254 DDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALD 313
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G IH Y + L L+VALGT+LV+MY+KCG++ +A VF+ ++ +N ++T +I GLA
Sbjct: 314 VGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLA 373
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+G + AIS F +MI G+ PD I+F +LSAC H G++ G++YF +M +N+ P +
Sbjct: 374 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 433
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+HY MVD+LGRAGL+EEA ++ +MP E +A + + L CR HG V L + K LL
Sbjct: 434 KHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHGNV-KLGEKAAKKLL 492
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+L+P YVL + + W+ A +N++G+ K+PGCS ++VN
Sbjct: 493 ELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 542
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 179/343 (52%), Gaps = 24/343 (6%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL---RPDNFTYPFVVKACGRCLLIGI 119
P F++N IR ++++ +++ + +ML+ G RPD+FTYP + K C L +
Sbjct: 40 NPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSL 99
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G + +FK+ L+ ++ N + M+A+C E++ A+ VF+E PVRD+VSW+ +I G+
Sbjct: 100 GHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKK 159
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
A++V+ M+ P+ VT++ LVS+C L ++ G+ + Y NGL + + L
Sbjct: 160 IGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPL 219
Query: 240 GTALVEMYSKCGHVEKAFKVF-NL------------MREKNLQSWTIMISGLADNGRGNY 286
AL++M+SKCG + +A ++F NL M EK++ W MI G R
Sbjct: 220 ANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQD 279
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KNYFDEMARVYNIKPTMEHYG 343
A++LF +M + PD I+ LSACS LG +D G Y ++ + N+
Sbjct: 280 ALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTS--- 336
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G I EA + + T N++ + +G HG
Sbjct: 337 -LVDMYAKCGNISEALCVFHGIQTR-NSLTYTAIIGGLALHGD 377
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 246/441 (55%), Gaps = 9/441 (2%)
Query: 8 TLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
TLI + LHQ H +K+ ++ ++C+++ + + + R +FN
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L + +I Y E++ LF +M ++P+ T V+ CG + +G SV
Sbjct: 307 D-LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H L KVG+ D + N L+ MYA C + AK VFE +D+V+W+S+I+GF S
Sbjct: 366 HGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL--ELDVALGT 241
+AL +FHRM + +PN VT+ SL SAC SL ++ G S+H+Y+V G V +GT
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++ Y+KCG + A +F+ + EKN +W+ MI G G ++ LF +M++ KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +F++ILSAC H G+V+EGK YF M + YN P+ +HY CMVDML RAG +E+A I
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP +P+ +FL C H + L + + K +L L P+ + YVL +++ + G
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSR-FDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGR 663
Query: 422 WDTAAELMVAINQKGLNKVPG 442
W+ A E+ + Q+GL+K+ G
Sbjct: 664 WNQAKEVRNLMKQRGLSKIAG 684
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 178/366 (48%), Gaps = 34/366 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P P + + ++R Y S+E +KL+D ++K G R D+ + +KAC
Sbjct: 96 RLVFDQIP-EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H + KV D + LL MYA C EI A VF ++ +R+VV W+SM
Sbjct: 155 LQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+V D + L +F+RM+ N N T +L+ ACT L + G+ H V +G+
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
EL L T+L++MY KCG + A +VFN +L WT MI G NG N A+SLF K
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV----YNIKPTMEH-------- 341
M +KP+ ++ +++LS C + ++ G++ +V N+ + H
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQN 393
Query: 342 -----------------YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGAC 381
+ ++ + G I EA + M +E PN V + S AC
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 382 RNHGQV 387
+ G +
Sbjct: 454 ASLGSL 459
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 168/334 (50%), Gaps = 4/334 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FN++ + + + ++I Y K E + LF+ M + + + +TY ++ AC +
Sbjct: 198 VFNDITLRN-VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G H + K G++ + +LL MY C +I A+ VF E D+V W++MI
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ S ++AL +F +MK PN VT+ S++S C + N+ G S+H ++ G+
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-W 375
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D + ALV MY+KC A VF + EK++ +W +ISG + NG + A+ LF +M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGL 354
+ P+ ++ +++ SAC+ LG + G + ++ + + H G ++D + G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
+ A +I + E N + + +G G +
Sbjct: 496 PQSA-RLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
L+S CT++ ++R H NGL D+++ T LV +Y G+ + A VF+ + E +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
W +M+ N + L+ +++ G + D I FS L AC+ L +D GK
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 328 EMARVYNIKPTMEH--YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++ +V P+ ++ ++DM + G I+ A H + N T N V S +
Sbjct: 167 QLVKV----PSFDNVVLTGLLDMYAKCGEIKSA-HKVFNDITLRNVVCWTSMIAG 216
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 212/353 (60%), Gaps = 1/353 (0%)
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK 156
LRPD T +V AC + + G +HS ++GLD + + N +L MY C +I+ A+
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
VF + +DV+SW+SM++G ++L +F +M+L P+ +TLV ++SAC
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G+ IH + D+ L TALV+MY+KCG ++ A +VF MR +N+ +W MI
Sbjct: 127 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
GLA +G G AISLF +M L PD ++F A+L ACSH GLVDEG F M + I+
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P MEHYGC+VD+L RA +++A I NMP + N+V+ + LGACR+ G L + + +
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH-FDLAEKIXR 305
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++LEP+ YV+ +++ + WD A +L + KG+ K PGCSW+++N
Sbjct: 306 RVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELN 358
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
KL N P+ VT+VSLV AC L N+ G+ +HSY+ GL+ ++++ A+++MY KC +
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
E A +VFN +REK++ SWT M+SGLA +G +++LF KM ++PD I+ +LSAC
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+ G +D+GK Y + + I + +VDM + G I+ A + R M N
Sbjct: 123 AQTGALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFT 180
Query: 374 LRSFLGACRNHGQ 386
+ +G HG
Sbjct: 181 WNAMIGGLAMHGH 193
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 7/262 (2%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+ +FN + + ++ +++ AK+ ES+ LF +M + PD T V+ AC
Sbjct: 65 AQEVFNRIR-EKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACA 123
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + G +H LI K ++ D + L+ MYA C ID+A VF M VR+V +W++
Sbjct: 124 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 183
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G DA+ +F +M+ P+ VT ++L+ AC+ V G ++ A+ N
Sbjct: 184 MIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNK 242
Query: 233 LELDVALG--TALVEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+++ + +V++ + V+ A + N+ + N W ++ G + A
Sbjct: 243 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 302
Query: 290 LFAKMIQTGLKPDSISFSAILS 311
+ ++I+ L+PDS +LS
Sbjct: 303 IXRRVIE--LEPDSCGRYVMLS 322
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 249/476 (52%), Gaps = 33/476 (6%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
R I + KT L Q+H L+ L + I+S FI ++ +L +
Sbjct: 9 ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRC------- 114
P L +N++I+ Y+ S S+ LF +M G+ PD FT+ ++K+C G C
Sbjct: 69 NPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKG 128
Query: 115 ---------------LLIGIGGSVHSL--------IFKVGLDSDKYIGNTLLRMYAACKE 151
+ IGI S +F LD D + N ++R + +
Sbjct: 129 VHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGD 188
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I++ +F +M R VVSW+SMIAG +AL++F M P+ T+V+++
Sbjct: 189 IEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPV 248
Query: 212 CTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
C L V GE IHSYA + L D +++G +LV+ Y KCG +E A++VFN M +KN+ S
Sbjct: 249 CARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVS 308
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W MISGL NG+G LF +MI G++P+ +F +LS C+H GLV+ G+N F M
Sbjct: 309 WNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMT 368
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
+ ++P +EH+GCMVD+L R G +EEA ++R MP PNAV+ S L A R G V +
Sbjct: 369 VDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHA 428
Query: 391 DDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ + K L++LEP NYVL ++V + G WD ++ + +K + K PG S V
Sbjct: 429 ECAV-KELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 234/402 (58%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ + + ++N+++ Y + ++I +F++ML+ G+ P T +
Sbjct: 298 SVETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH + ++ L SD + N+L+ MY+ CK +D+A +F + R V
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI G+ S+AL F MK P+S T+VS++ A L R + IH
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + L+ ++ + TALV+MYSKCG + A K+F+++ ++++ +W MI G +G G A+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF KM + ++P+ I++ +++SACSH GLVDEG +F M + Y ++P+M+HYG MVD+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG I+EA+ I NMP P + + GAC+ H + + + K L +L P+ G
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNI-EVGEKAAKKLFELNPDEGGY 655
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+VL A++ + + W AE+ + +KGL K PGCS V++ +
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRN 697
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 5/377 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLF 67
L++L ++ LHQ+ L +K L + ++ + L S S++ +F P+ L
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFE--PIDDKLD 112
Query: 68 A-YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
A Y+T+++ YAK S ++ M ++P + + +++K CG + G +H
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ ++ + ++ MYA C++ID A +F+ MP RD+VSW+++IAGF A
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L++ RM+ + P+S+TLV+++ A + + G+SIH YA+ G V + TAL +M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG VE A +F+ M +K + SW M+ G NG AI++F KM++ G+ P ++
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
L AC+ LG ++ GK + + N+ + ++ M + ++ A I N+
Sbjct: 353 MEALHACADLGDLERGK-FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 367 TEPNAVILRSFLGACRN 383
+ LG +N
Sbjct: 412 GRTHVSWNAMILGYAQN 428
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 184/409 (44%), Gaps = 45/409 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L ++NT+I +++ + ++++L M G RPD+ T V+ A
Sbjct: 204 MFDRMP-ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
L+ +G S+H + G I L MY+ C ++ A+ +F+ M + VVSW+SM+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V P A+ VF +M P VT++ + AC L ++ G+ +H + L
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+++ +L+ MYSKC V+ A +FN + + SW MI G A NGR + A++ F++M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEG-------------KNYF--------------DE 328
G+KPDS + +++ A + L + KN F
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 329 MARVYNIKPTMEH---YGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACR 382
MAR + H + M+D G GL A + M EPN + S + AC
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 383 NHGQVLYLDDNLG-----KLLLKLEPEL---GANYVLAASVSSLSGNWD 423
+ G V D+ L K LEP + GA L + WD
Sbjct: 563 HSGLV---DEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 244/434 (56%), Gaps = 7/434 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNN-LPVTPPLFAYNTLIRAY 76
QLH L + + L+ ++ + + F L + + R +F+ PV + +I Y
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVD--IVVCTAMISGY 326
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ ++++F +L+ +R ++ T V+ AC + +G +H I K G
Sbjct: 327 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSC 386
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
Y+G+ ++ MYA C +D+A F + +D V W+SMI P +A+ +F +M +A
Sbjct: 387 YVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 446
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ V++ + +SAC +L + G+ IH++ + D+ +AL++MYSKCG+++ A
Sbjct: 447 GTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLA 506
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VF+ M EKN SW +I+ ++GR +++LF M+ G++PD ++F AI+SAC H
Sbjct: 507 CRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHA 566
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
G VDEG +YF M I MEHY CMVD+ GRAG + EA+ +I +MP P+A + +
Sbjct: 567 GQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGT 626
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR HG V L + + L L+P+ YVL ++V + +G W++ ++ + ++G
Sbjct: 627 LLGACRLHGNV-ELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 685
Query: 437 LNKVPGCSWVKVND 450
+ KVPGCSW+ VN+
Sbjct: 686 VQKVPGCSWIDVNN 699
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 172/321 (53%), Gaps = 6/321 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +IR + ++ + +ML G PD +T+P+V+KACG + +G VH I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+G + D ++G++L++ Y+ I A+ +F+ MP +D V W+ M+ G+V +A
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--VALGTALVEM 246
VF M+ +PNSVT ++S C S I + G +H V +GLE+D VA AL+++
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KC VE A K+F+ ++ T MISG NG N A+ +F ++Q ++ +S++
Sbjct: 295 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 354
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNM 365
+++L AC+ L + GK + + N + G ++DM + G ++ A+ +
Sbjct: 355 ASVLPACAGLAALTLGKELHGHILK--NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 412
Query: 366 PTEPNAVILRSFLGACRNHGQ 386
++ +AV S + +C +G+
Sbjct: 413 -SDKDAVCWNSMITSCSQNGK 432
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G H+ + G+ + +G LL MY C AK +F ++ + W+ MI GF
Sbjct: 65 GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
AL + +M P+ T ++ AC L +V G +H G ELDV +
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G++L++ YS+ G + A +F+ M K+ W +M++G NG + A +F +M +T
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244
Query: 300 KPDSISFSAILSACSHLGLVDEG 322
P+S++F+ +LS C+ +++ G
Sbjct: 245 NPNSVTFACVLSVCASEIMINFG 267
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 180 CDSPSDA--LKVFH----------RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
C PS LK FH + + N+ + LVS++ CT + G H+
Sbjct: 12 CFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQ 71
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+VNG+ + LGT L+ MY CG A +F +R + W MI G G+ ++A
Sbjct: 72 MLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFA 131
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ + KM+ G PD +F ++ AC L V G+ D++ + + + ++
Sbjct: 132 LLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKI-QFMGFELDVFVGSSLIK 190
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
G I +A ++ MP++ + V+ L +G D+ G + E
Sbjct: 191 FYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNGD---WDNATGVFMEMRRTETNP 246
Query: 408 NYVLAASVSSLSGNWDTAAELMV 430
N V A V S+ A+E+M+
Sbjct: 247 NSVTFACVLSV-----CASEIMI 264
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 240/399 (60%), Gaps = 4/399 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKAC 111
R +F+ +P + ++N +++AY + + + ++F +M+ G + P+ T V+ AC
Sbjct: 170 ARRVFDGIP-RRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAAC 228
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ +G + + ++ +G+ L+ MY C E+ A+ VF+ + +DVV+W+
Sbjct: 229 RDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWN 288
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+MI G+ +A+ +FH M+ SP+ +TLV ++SAC ++ + G + +YA
Sbjct: 289 AMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASHR 348
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
GL +V +GTALV+MYSKCG ++KA +VF + KN +W +I GLA NGRG+ AI F
Sbjct: 349 GLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIRQF 408
Query: 292 AKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
M + GL+PD I+F +LSAC H GL+ +G+ +F+ + + I P +EHY CMVD+L
Sbjct: 409 EVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLA 468
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG +EEA+ + +P + +AV+L + L ACR V + + + +++LEP NYV
Sbjct: 469 RAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNV-EVSERVINRIMQLEPSNSWNYV 527
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + S D +A++ + ++G++K+PGCSWV+V+
Sbjct: 528 VSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVEVS 566
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 3/310 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P F+YN +R +A T +++LF ML+ LRPD +T PF++ A R S
Sbjct: 79 APTAFSYNVTLRFFASTRPRT-ALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARS 137
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+L+ ++GL + + ++L+ MY+ + A+ VF+ +P RDVVSW++M+ +
Sbjct: 138 AHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGM 197
Query: 183 PSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+D ++F M +PN VT+ +++AC ++ G + + +E+ +G+
Sbjct: 198 AADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGS 257
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV MY KCG + +A +VF+ + K++ +W MI+G A NG AI+LF M Q G P
Sbjct: 258 ALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASP 317
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+ +LSAC+ +G ++ G D A + + +VDM + G +++A +
Sbjct: 318 DKITLVGVLSACAAVGALELGTE-LDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQV 376
Query: 362 IRNMPTEPNA 371
+P + A
Sbjct: 377 FGKLPCKNEA 386
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 241/430 (56%), Gaps = 34/430 (7%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P Y +LI Y T I++ +F +++ GLRPD+ + + ACG+ + G V
Sbjct: 65 PDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLV 124
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS- 182
H +IF+ L ++ +GN L+ MY EI +A+ VF++M ++DV SW+S++ GFV C+
Sbjct: 125 HGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGL 184
Query: 183 ------------------------------PSDALKVFHRMKLANES-PNSVTLVSLVSA 211
P L++F +MK E+ P +T V+++S
Sbjct: 185 ESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSG 244
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C L G+++H Y L+ V + AL++MYSK G VE A K+F+ + +K++ SW
Sbjct: 245 CADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSW 304
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
T MIS + +G+GN+A+ +F M+++G+ P+ ++F +LS CSH GL+ E F+ M +
Sbjct: 305 TTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQ 364
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y +P +EHYGCMVD+L RAGL+EEA +I NMP +P+AVI RS L AC N + L L
Sbjct: 365 CYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQ-RNLGLA 423
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
+ GK +++LEP YVL +++ ++ A ++ + + + K P CS++++N G
Sbjct: 424 EIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELN-G 482
Query: 452 SAEEMSKETA 461
+ E A
Sbjct: 483 VVHQFHTENA 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 38/279 (13%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES-- 199
L+ YA A+ VF + D V+++S+I +++ P A VF KL NE
Sbjct: 42 LVNRYAKLGNPRDAQKVFGYIQDPDRVTYTSLINLYLSTQLPIKAFSVFS--KLVNEGLR 99
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK---------- 249
P+S ++V +SAC ++ G+ +H L + +G AL++MY +
Sbjct: 100 PDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLV 159
Query: 250 ---------------------CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
C +E A +VF+ M +N +WT MI+G G +
Sbjct: 160 FKQMGIKDVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGL 219
Query: 289 SLFAKMIQTGL-KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+F +M G +P I+ A+LS C+ LG D G+ +++V N+ + ++D
Sbjct: 220 EMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKV-NLDKGVTVSNALMD 278
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
M + G +E A I + + + + + A +HG+
Sbjct: 279 MYSKGGCVESAMKIFDRL-VKKDVFSWTTMISAHSSHGK 316
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLE-LDVALGTALVEMYSKCGHVEKAFKVFNL 262
+L L+ +C L+ ++ IH+ A+ GL ++ L LV Y+K G+ A KVF
Sbjct: 5 SLKLLLQSCADLVTLK---QIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGY 61
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+++ + ++T +I+ A S+F+K++ GL+PDS S LSAC + G
Sbjct: 62 IQDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNG 121
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
K + R + + ++DM R G I+ A + + M
Sbjct: 122 KLVHGMIFR-FQLGANSIVGNALIDMYCRNGEIKIAQLVFKQM 163
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
H +H K +LD + + + + S + +F+ L V +F++ T+I A+
Sbjct: 253 HGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRL-VKKDVFSWTTMISAH 311
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC-LLIGIGGSVHSLIFKVGLDSD 135
+ ++++F +ML++G+ P++ T+ V+ C LL+ + +I G +
Sbjct: 312 SSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPK 371
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIA 175
++ + ++ AK + + MP+ D V W S+++
Sbjct: 372 IEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLS 412
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 43/471 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH +K L N + + + + SL + R +F+ +F++N +I Y +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMISGYNRM 214
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
ESI+L EM + + P + T V+ AC + + VH + + + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 140 NTLLRMYAACKEIDVA-------------------------------KAVFEEMPVRDVV 168
N L+ YAAC E+D+A + F++MPVRD +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI G++ +++L++F M+ A P+ T+VS+++AC L ++ GE I +Y
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
N ++ DV +G AL++MY KCG EKA KVF+ M +++ +WT M+ GLA+NG+G AI
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I++ +LSAC+H G+VD+ + +F +M + I+P++ HYGCMVDM
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
LGRAGL++EAY I+R MP PN+++ + LGA R H D+ + +L +L+LEP+
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-----DEPMAELAAKKILELEPD 569
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
GA Y L ++ + W E+ I + K PG S ++VN G A E
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVN-GFAHE 619
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 44/401 (10%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNN 59
SR I +++ + KT QLH+ + + N + F + L + + LF
Sbjct: 35 SRFI-SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR-CLLIG 118
+P P + +N +I+ ++K C E ++L+ MLK G+ PD+ T+PF++ R +
Sbjct: 94 IP-EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H + K GL S+ Y+ N L++MY+ C +D+A+ VF+ DV SW+ MI+G+
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+++++ M+ SP SVTL+ ++SAC+ + + + +H Y E +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREK----------------NLQ------------- 269
L ALV Y+ CG ++ A ++F M+ + NL+
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 270 --SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KN 324
SWTIMI G G N ++ +F +M G+ PD + ++L+AC+HLG ++ G K
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
Y D+ IK + ++DM + G E+A + +M
Sbjct: 393 YIDK----NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 248/427 (58%), Gaps = 34/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R L PV + ++ +LI AY++ + E++ F ML G+ PD+ T V+ AC +
Sbjct: 132 RLLLAQAPVRD-VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQ 190
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------- 151
+ +G S+H L+ + G+ + + L+ MYA C +
Sbjct: 191 LKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNA 250
Query: 152 ----------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
+DVA+++F++M VRD+++++SMI G++ +AL +F M+ + +
Sbjct: 251 IIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVD 310
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+ T+VSL+SAC SL + G ++H+ + +E D+ +GTAL++MY KCG V +A VF
Sbjct: 311 NFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQ 370
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M ++++ +WT MI+GLA NG G + F +M G +P+ +S+ A+L+ACSH L++E
Sbjct: 371 RMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNE 430
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G+ YFDEM +YNI P +EHYGCM+D+LGR+GL++EA +++ MP +PN+VI S L AC
Sbjct: 431 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSAC 490
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R H ++ L + LLK+EP+ A YV ++ S W+ A+++ + + ++ + K
Sbjct: 491 RVHKRI-DLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTA 549
Query: 442 GCSWVKV 448
G S V V
Sbjct: 550 GYSSVTV 556
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 211/425 (49%), Gaps = 9/425 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
QLH + LK + +S ++ +++ S+ ++L N ++ + ++N+++ YA
Sbjct: 854 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKAL--NDILSEDVISWNSILSMYA 911
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD-SDK 136
E++ +ML G P ++ ++ G+ +G +H ++ K+G S
Sbjct: 912 DRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSV 971
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ TL+ MY C D + A+F E+P + +S+I + C+ AL++ H M +
Sbjct: 972 HVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVE 1031
Query: 197 NESPNSVTLVSLVSACT--SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+P+ VT + + A + + ++ + + +HS V G E+D+A+ ++L+ Y+ G +
Sbjct: 1032 GVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLS 1091
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+ +F + + N+ +T +IS A G G A+ LF +M+ +GLKPD+++F ++ C
Sbjct: 1092 SSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCD 1151
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
G+ +EG+ + M + P H+ CMV++L R G ++EA ++ P
Sbjct: 1152 QAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAW 1211
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S L +C+ HG+ + L +L+ + + A + ++ + G+ +TA + N
Sbjct: 1212 SSLLQSCKAHGENV-LGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNV 1270
Query: 435 KGLNK 439
K + K
Sbjct: 1271 KEVKK 1275
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 48/306 (15%)
Query: 67 FAYNTLIRA--YAKTSCSIESIK--LFDEMLKTGLRPDNFTYPFVVKACG----RCLLIG 118
F ++T +RA A TS I LF M + +RPD FT+ F+ K R LL
Sbjct: 6 FLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCT 65
Query: 119 IGGSVHSLIFKVGLDSD-KYIGNTLLRMYA----------ACKEIDVAKAV--------- 158
+ +H+ + L S ++ N+L+ MY A EI V AV
Sbjct: 66 M---LHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGL 122
Query: 159 ------------FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLV 206
+ PVRDV+SW+S+IA + D +A+ F M +P+ VT++
Sbjct: 123 AKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVI 182
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM-RE 265
++SAC+ L ++ G S+H G+ + L AL++MY+KCG A +VF+ + R
Sbjct: 183 GVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRG 242
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+ QSW +I G +G + A SLF +M D I+F+++++ H G + E
Sbjct: 243 RRPQSWNAIIDGYCKHGHVDVARSLFDQMEVR----DIITFNSMITGYIHSGQLREALLL 298
Query: 326 FDEMAR 331
F M R
Sbjct: 299 FMNMRR 304
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/300 (17%), Positives = 124/300 (41%), Gaps = 6/300 (2%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N +I + + + + ++ M+ +G+R T+ ++ C + +H +
Sbjct: 704 NRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL----QLHGRVLA 759
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+GL + ++G+ L+ Y + A ++F E+P+++ + ++ G + +
Sbjct: 760 LGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICC 819
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNG-LELDVALGTALVEMY 247
F M+ N ++ + C + G +H + G + ++ L +LV++Y
Sbjct: 820 FLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLY 879
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
S G K N + +++ SW ++S AD G A+ +M+ G P SF
Sbjct: 880 SAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFV 939
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L+ G G + ++ ++ ++DM G+ + + I +P+
Sbjct: 940 SLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPS 999
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 129/295 (43%), Gaps = 22/295 (7%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN---ESPNSVTLVSLVSACTSLINV 218
M VRDV S + MI GF+ D +D + +R +A+ E+P+ T +++ C++ +
Sbjct: 695 MAVRDVASLNRMITGFIR-DGLADRARAVYRWMVASGIRETPH--TFSTILGVCSTYEAL 751
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS---WTIMI 275
+ +H + GL + +G+ALV Y HVE +L RE LQ+ +++
Sbjct: 752 Q----LHGRVLALGLCCNPFVGSALVNHYM---HVESPHAALSLFRELPLQNTAMCNVVL 804
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG-LVDEGKNYFDEMARVYN 334
GL + I F M + L+ + +S+ + C G +++G+ + +
Sbjct: 805 RGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGW 864
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I + +VD+ G + + ++ +E + + S L + G + L
Sbjct: 865 IPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILSMYADRGHMKEAVYYL 923
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++L + ++V ++S +G+W ++ +++ G + CS V V
Sbjct: 924 KQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFS----CSSVHVQ 974
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 226/388 (58%), Gaps = 3/388 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
TP +N +IR + ++ + + M+ + D T FV+KAC R L
Sbjct: 67 TPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQ 126
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ I + G +D +G TLL +YA EID A+ VF+EM RD+ SW+++I+GF
Sbjct: 127 IHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSK 186
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
P++AL +F RM++ PN ++++ +SAC L + + GE IH Y V +++ +
Sbjct: 187 PTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNV 246
Query: 243 LVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+++MY+KCG V+KA+ VF M K++ +W MI A +G G A+ LF KM Q+G+ P
Sbjct: 247 VIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSP 306
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +S+ A+L AC+H GLV+EG F+ M +KP ++HYG +VD+LGRAG + EAY I
Sbjct: 307 DDVSYLAVLCACNHGGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDI 365
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ +MPT P+ V+ ++ LGA R H V + + + + L+++ ++VL ++V +
Sbjct: 366 VNSMPTVPDIVLWQTLLGASRTHRNV-EIAETVSRKLVEMGSNHCGDFVLLSNVYAARER 424
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W + A+ + + KVPG S+++ N
Sbjct: 425 WADVGRVREAMKNRDVKKVPGLSYIEGN 452
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 18/256 (7%)
Query: 140 NTLLRMYA-ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+ LL +YA + + A F ++ W+++I GF+ +P++A + M +
Sbjct: 42 SKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR 101
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+++T ++ AC ++ IH++ V G D LGT L+++Y+K G ++ A K
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEK 161
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M ++++ SW +ISG A + A+SLF +M G KP+ IS LSAC+ LG
Sbjct: 162 VFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGD 221
Query: 319 VDEGKN--------YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
EG+ FD A+V N+ ++DM + G +++AY + +M +
Sbjct: 222 FKEGEKIHGYIKVERFDMNAQVCNV---------VIDMYAKCGFVDKAYLVFESMSCRKD 272
Query: 371 AVILRSFLGACRNHGQ 386
V + + A HG+
Sbjct: 273 IVTWNTMIMAFAMHGE 288
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F ++ + +NT+I A+A ++++LF++M ++G+ PD+ +Y V+ AC
Sbjct: 263 VFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGG 322
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWSSMI 174
L+ G + + + G+ + +++ + + A + MP V D+V W +++
Sbjct: 323 LVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLL 382
Query: 175 AG 176
Sbjct: 383 GA 384
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 257/472 (54%), Gaps = 38/472 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH--FTRSLFNNLPVTPPLFAYNT 71
K++ Q H+ L L N+ + ++ I + +I H +R +F++L +F +N+
Sbjct: 37 KSLKLTRQSHSRILSLGLSQNSLLATKLIF-AYAICQHPYHSRLVFDSLQ-HKNVFLWNS 94
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LI YAK E+ +LF++M + + PD+FT + K + G S+H ++G
Sbjct: 95 LINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIG 154
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD------------------------- 166
SD + N+++ MY C + ++ VF+EM +R+
Sbjct: 155 FVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFD 214
Query: 167 ------VVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVR 219
V SW++MI G+V +AL +F M++ + PN V+LVS++ AC+S +
Sbjct: 215 RMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLL 274
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGL 278
+G IH +AV L +V+L AL++MYSKCG ++ A +VF + K+ SW+ MISG
Sbjct: 275 SGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGY 334
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+G+G AI L+ KM+Q G++PD I+ ILSACS GLV+EG N + + Y I+PT
Sbjct: 335 GLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPT 394
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+E + C+VDMLGRAG ++ A I+ MP EP + + + HG L + + + L
Sbjct: 395 LEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGD-LEMQELAYRFL 453
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++LEPE +NYV +++ + S WD AE+ + K L KVPGCSW+ +N+
Sbjct: 454 IQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINN 505
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 259/438 (59%), Gaps = 5/438 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTP-PLFAYNTLIRAYAK 78
QLH+L +K L +T +++ I S S T R + ++ P ++NT+I Y +
Sbjct: 114 QLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTIISGYLR 173
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ F +M+K + D+ T + A + + +G HSL+ G + Y+
Sbjct: 174 GGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYM 233
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++L+ MYA C ++ A+ VF M R+VV W+SMI+G+ +A+ +F M++
Sbjct: 234 GSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGM 293
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+ ++VS+C + + G +H+Y V+GL ++++ +L++MYSKCG + KA +
Sbjct: 294 KVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKAHE 353
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLG 317
+F + ++++ SWT MI G NG + A+ LFA+M G + P+ ++F +L++CSH G
Sbjct: 354 IFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGG 413
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G +YF M+ VY + P +EHYGCMVD+LGRA L+ EA I+NMP P+ V+ RS
Sbjct: 414 LVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSL 473
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR G+V L + + + +L+LEP+ A +VL ++V + + W EL +++ +
Sbjct: 474 LFACRACGEV-GLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMDNSRM 532
Query: 438 NKVPGCSWVKVNDGSAEE 455
+K PGCS+++V DG E
Sbjct: 533 SKQPGCSFIEV-DGCVHE 549
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 148/264 (56%), Gaps = 3/264 (1%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
DN++ A R + +G +HSL K+GL SD ++ N+L+ MY++C A+ V
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVL 151
Query: 160 EEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+ P D VSW+++I+G++ P+ AL+ F +M + + VTL++ + A
Sbjct: 152 DSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK 211
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
V+ G HS VVNG ++ +G++L+ MY+KCG VE A KVF+ M E+N+ WT MISG
Sbjct: 212 VKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISG 271
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
G+ A++LF M TG+K D + + ++S+C+ +G +D G+ Y V+ +
Sbjct: 272 YTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGR-YVHAYCDVHGLGK 330
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHI 361
+ ++DM + G I +A+ I
Sbjct: 331 ELSVKNSLIDMYSKCGDINKAHEI 354
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 237/431 (54%), Gaps = 2/431 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH L + T + + ++ + S + TR LF+ +P +YN +I +Y++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD-FVSYNVVISSYSQ 328
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
S+ F EM G NF + ++ + +G +H DS ++
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN+L+ MYA C+ + A+ +F+ +P R VSW+++I+G+V LK+F +M+ +N
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T +++ A S ++ G+ +H++ + +G +V G+ LV+MY+KCG ++ A +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++N SW +IS ADNG G AI FAKMI++GL+PDS+S +L+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V++G YF M+ +Y I P +HY CM+D+LGR G EA ++ MP EP+ ++ S L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR H + KL + A YV +++ + +G W+ ++ A+ ++G+
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 439 KVPGCSWVKVN 449
KVP SWV+VN
Sbjct: 689 KVPAYSWVEVN 699
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 6/368 (1%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLS--ISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +K D N + +S +L S L LF +P + +NTLI Y
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV-TFNTLITGYE 226
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
K ESI LF +M ++G +P +FT+ V+KA +G +H+L G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+GN +L Y+ + + +F+EMP D VS++ +I+ + D +L F M+
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ +++S +L +++ G +H A++ + + +G +LV+MY+KC E+A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F + ++ SWT +ISG G + LF KM + L+ D +F+ +L A +
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+ GK + R N++ G +VDM + G I++A + MP + NAV +
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNAL 524
Query: 378 LGACRNHG 385
+ A ++G
Sbjct: 525 ISAHADNG 532
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 161/318 (50%), Gaps = 8/318 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKAC 111
R LF+ +P + + L+ YA+ S E+ KLF +M ++ PD+ T+ ++ C
Sbjct: 99 RDLFDAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKY--IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+ G VH+ K+G D++ + + N LL+ Y + +D+A +FEE+P +D V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
++++I G+ ++++ +F +M+ + P+ T ++ A L + G+ +H+ +V
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G D ++G +++ YSK V + +F+ M E + S+ ++IS + + ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDM 348
F +M G + F+ +LS ++L + G+ + + ++ H G +VDM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA--LLATADSILHVGNSLVDM 395
Query: 349 LGRAGLIEEAYHIIRNMP 366
+ + EEA I +++P
Sbjct: 396 YAKCEMFEEAELIFKSLP 413
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT++ + ++ A+ +F+ MP R VV+W+ ++ + +A K+F +M ++
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 200 --PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--VALGTALVEMYSKCGHVEK 255
P+ VT +L+ C + A +H++AV G + + + + L++ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A +F + EK+ ++ +I+G +G +I LF KM Q+G +P +FS +L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-- 260
Query: 316 LGLVD 320
+GL D
Sbjct: 261 VGLHD 265
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 222/375 (59%), Gaps = 42/375 (11%)
Query: 119 IGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
+G +HSL+ + G + SD ++ +L+++Y C+ + A++VF EM VRDVV+W+ MIAG+
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155
Query: 178 VACDS-------------------------------PSDALKVFHRMKLANESPNSVTLV 206
V P +A++VF RM++ P+ V L+
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
S++SAC L V GE +H + V GL ++ L ++++MY KCG +EKA +VF M EK
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK 275
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF 326
++ +WT +I+G A +G G A+ +F +M + + P+ ++F AILSACSH+GL D G+ YF
Sbjct: 276 SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYF 335
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ M Y IKP +EHYGCMVD+LGRAG ++EA ++++MP + NA I + L A R HG
Sbjct: 336 NIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHG- 394
Query: 387 VLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
D +LG+ L++LEP NY+L +++ + WD ++L A+ ++GL VPG
Sbjct: 395 ----DADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPG 450
Query: 443 CSWVKVNDGSAEEMS 457
S ++V DG E +
Sbjct: 451 ASSIEV-DGMVHEFT 464
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 236/402 (58%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ + + ++N++I Y ++ + ++ +F +ML G++P N T +
Sbjct: 181 SVSIARVIFDGMD-HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH L+ ++ LDSD + N+L+ MY+ CK +D+A +F+ + + +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI G+ ++AL F M+ N P+S T+VS++ A L R + IH
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ L+ +V + TALV+MY+KCG + A K+F++M +++ +W MI G +G G ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M + +KP+ I+F LSACSH GLV+EG +F+ M + Y I+PTM+HYG MVD+
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + +A+ I+ MP +P + + LGAC+ H V L + + KL P+ G
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNV-DLGEKAAFEIFKLNPDDGGY 538
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+VL A++ + + W A++ + + GL K PGCS V++ +
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGN 580
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 174/351 (49%), Gaps = 11/351 (3%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++F+ +P L +NT+I YA+ + ++ L M + G RPD+ T ++ A
Sbjct: 86 NMFDRMP-ERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADT 144
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L+ IG +VH + + G +S + L+ MY+ C + +A+ +F+ M R VVSW+SMI
Sbjct: 145 RLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMI 204
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+V A+ +F +M P +VT++ + AC L ++ G+ +H L+
Sbjct: 205 DGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLD 264
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
DV++ +L+ MYSKC V+ A +F +R K L SW MI G A NG N A++ F +M
Sbjct: 265 SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEM 324
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+KPDS + +++ A + L + + K + R + + + +VDM + G
Sbjct: 325 QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF-LDKNVFVMTALVDMYAKCGA 383
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
I A + +M + + + + HG LGK ++L E+
Sbjct: 384 IHTARKLF-DMMNARHVITWNAMIDGYGTHG--------LGKTSVELFKEM 425
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 161/316 (50%), Gaps = 5/316 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+++ YAK+S ++ F M +RP + + +++K CG + G +H + G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+ + ++ MYA C++I+ A +F+ MP RD+V W++MI+G+ AL +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
RM P+S+T+VS++ A +R G ++H Y + G E V + TALV+MYSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
V A +F+ M + + SW MI G +G A+ +F KM+ G++P +++ L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP-- 369
AC+ LG ++ GK + ++ + + ++ M + ++ A I +N+ +
Sbjct: 241 ACADLGDLERGK-FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 370 --NAVILRSFLGACRN 383
NA+IL C N
Sbjct: 300 SWNAMILGYAQNGCVN 315
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 45/308 (14%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L + LD + +++ I + S + +F NL L ++N +I YA+
Sbjct: 254 VHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTLVSWNAMILGYAQNG 312
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
C E++ F EM ++PD+FT V+ A + +H L+ + LD + ++
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT 372
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MYA C I A+ +F+ M R V++W++MI G+ ++++F MK P
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +T + +SAC+ HS G VE+ F
Sbjct: 433 NDITFLCALSACS-----------HS------------------------GLVEEGLCFF 457
Query: 261 NLMR-----EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
M+ E + + M+ L GR N A KM +KP + A+L AC
Sbjct: 458 ESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKM---PIKPGITVYGAMLGACKI 514
Query: 316 LGLVDEGK 323
VD G+
Sbjct: 515 HKNVDLGE 522
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 237/431 (54%), Gaps = 7/431 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +++ +H++ + LT + I ++ R +F LP + A+NT+I
Sbjct: 267 QIHAQIVES--EHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGGLV 323
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ E+ +F MLK + PD TY ++ AC R + G +H+ K GL SD
Sbjct: 324 DSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR 383
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
GN L+ MY+ + A+ VF+ MP RDVVSW++++ G+ C ++ F +M
Sbjct: 384 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQG 443
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
N +T + ++ AC++ + ++ G+ IH+ V G+ D+A+ AL+ MY KCG VE A
Sbjct: 444 VEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAI 503
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+V M +++ +W +I GLA NGRG A+ F M ++P++ +F ++SAC
Sbjct: 504 RVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRN 563
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV+EG+ F M + Y I PT +HY CMVD+L RAG + EA +I MP +P+A + +
Sbjct: 564 LVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGAL 623
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L ACR HG V + + + LKLEP+ YV + + + +G W A+L + ++G+
Sbjct: 624 LAACRAHGNV-EIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682
Query: 438 NKVPGCSWVKV 448
K PG SW++V
Sbjct: 683 KKEPGRSWIEV 693
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 197/369 (53%), Gaps = 4/369 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H ++ L +N + + I + + S+ R +F+ + + ++ TL AYA++
Sbjct: 166 EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEV-SWTTLTGAYAES 224
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ES+K + ML+ G+RP TY V+ ACG + G +H+ I + SD +
Sbjct: 225 GYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVS 284
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L +MY C + A+ VFE +P RDV++W++MI G V +A +FHRM +
Sbjct: 285 TALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVA 344
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VT ++++SAC + G+ IH+ AV +GL DV G AL+ MYSK G ++ A +V
Sbjct: 345 PDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQV 404
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M ++++ SWT ++ G AD G+ + S F KM+Q G++ + I++ +L ACS+ +
Sbjct: 405 FDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVAL 464
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK E+ + I + ++ M + G +E+A + M T + V + +G
Sbjct: 465 KWGKEIHAEVVKA-GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIG 522
Query: 380 ACRNHGQVL 388
+G+ L
Sbjct: 523 GLAQNGRGL 531
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 194/381 (50%), Gaps = 4/381 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L+ + N II+ + + S++ R LF+ + ++N +I YA
Sbjct: 65 QVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS-NKSVVSWNVMISGYAHR 123
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+ LF M + GL PD FT+ ++ AC + G VH + + GL ++ +G
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA C + A+ VF+ M RD VSW+++ + ++LK +H M
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +T ++++SAC SL + G+ IH+ V + DV + TAL +MY KCG V+ A +V
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + +++ +W MI GL D+G+ A +F +M++ + PD +++ AILSAC+ G +
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK + + + +++M +AG +++A + MP + V + +G
Sbjct: 364 ACGKEIHARAVK-DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTALVG 421
Query: 380 ACRNHGQVLYLDDNLGKLLLK 400
+ GQV+ K+L +
Sbjct: 422 GYADCGQVVESFSTFKKMLQQ 442
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 161/325 (49%), Gaps = 33/325 (10%)
Query: 94 KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
+ G + D++ Y ++++C + + +G VH I + G+ + YI NTLL++Y C ++
Sbjct: 37 QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F++ + VVSW+ MI+G+ +A +F M+ P+ T VS++SAC+
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
S + G +H + GL + +G AL+ MY+KCG V A +VF+ M ++ SWT
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 216
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE----- 328
+ A++G ++ + M+Q G++P I++ +LSAC L +++GK +
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESE 276
Query: 329 ----------MARVY----NIKPTMEHYGC-----------MVDMLGRAGLIEEAYHIIR 363
+ ++Y +K E + C M+ L +G +EEA+ +
Sbjct: 277 HHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFH 336
Query: 364 NMPTE---PNAVILRSFLGACRNHG 385
M E P+ V + L AC G
Sbjct: 337 RMLKECVAPDRVTYLAILSACARPG 361
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 232/397 (58%), Gaps = 42/397 (10%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++LFD + PD FT FV+KAC + + G ++H L K+G S+ ++ N +L +
Sbjct: 1 MRLFDVL------PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNL 54
Query: 146 YAACKEIDVAKAVFEEMPVRDVV-------------------------------SWSSMI 174
Y C E+ A +FE+MP RD V SW+SMI
Sbjct: 55 YGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMI 114
Query: 175 AGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+GFV C P++A+ +F MKL +E+ PN VT+VS+++AC L ++ G +H Y+ +G
Sbjct: 115 SGFVQCGKPNEAIDLF--MKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ +V + L++MY KCG +E A +VF M E+ + SW+ MI+GLA +G+ A+ LF+
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+MI+ G+KP+ ++F +L ACSH+GL+DEG+ +F M Y + P +EHYGC+VD+ RA
Sbjct: 233 EMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRA 292
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL+EEA+ I +MP +PN V+ + LG C+ H + ++ + K L +L+P YV+
Sbjct: 293 GLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAI-KHLSELDPLNDGYYVVI 351
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + W+ AA + + +G+ K G S + VN
Sbjct: 352 SNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVN 388
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 249/434 (57%), Gaps = 5/434 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H +KT + + +R I L + L R + + +P + ++ +I Y++
Sbjct: 30 QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP-ERNVVSWTAMISGYSQ 88
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E++ LF EML +G P+ FT+ V+ +C +G +HSL+ K +S ++
Sbjct: 89 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++LL MYA +I A+ VF+ +P RDVVS +++I+G+ +AL +F R++
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
N VT S+++A + L + G +HS+ + L V L +L++MYSKCG + + +
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 268
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLG 317
+F+ M E+ + SW M+ G + +G G A+ LF M + +KPDS++F A+LS CSH G
Sbjct: 269 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 328
Query: 318 LVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ D G F EM + +P +EHYGC+VD+ GRAG +EEA+ I+ MP EP A I S
Sbjct: 329 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 388
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H Q +++ + + + LL++E E NYV+ +++ + +G WD + + +K
Sbjct: 389 LLGACRVH-QNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 447
Query: 437 LNKVPGCSWVKVND 450
+ K PG SW++++
Sbjct: 448 VIKEPGRSWIELDQ 461
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Query: 96 GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
GL + Y V+ C I G VH+ + K + Y+ L+ +Y C+ + A
Sbjct: 5 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
+ V +EMP R+VVSW++MI+G+ S+AL +F M ++ +PN T +++++CTS
Sbjct: 65 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ G IHS + E + +G++L++MY+K G + +A +VF+ + E+++ S T +I
Sbjct: 125 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
SG A G A+ LF ++ + G++ + ++++++L+A S L +D G+ + R +
Sbjct: 185 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA-KL 243
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ ++DM + G + + I +MP E + + L HG
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHG 292
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 223/380 (58%), Gaps = 1/380 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ ++ YA+ S +++KLF++M +G+ P FT V+ AC + G +HS F
Sbjct: 288 WSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAF 347
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G Y+ + ++ MYA C + A+ FE + DVV W+S+I G+V L
Sbjct: 348 KLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLN 407
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M++ PN +T+ S++ AC+SL + G+ +H+ + G +L+V +G+AL MY+
Sbjct: 408 LYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYT 467
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ + +F M +++ SW MISGL+ NG GN A+ LF KM+ G+KPD ++F
Sbjct: 468 KCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVN 527
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH+GLVD G YF M +NI P +EHY CMVD+L RAG + EA I + +
Sbjct: 528 LLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVD 587
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+ R LGAC+NH + L G+ L++L + YVL +S+ + G+ + +
Sbjct: 588 HGLCLWRILLGACKNH-RNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERV 646
Query: 429 MVAINQKGLNKVPGCSWVKV 448
+ +G+NK PGCSW+++
Sbjct: 647 RRIMKARGVNKEPGCSWIEL 666
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 168/324 (51%), Gaps = 10/324 (3%)
Query: 68 AYNTLIRAYAKTSCSIE---SIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSV 123
++N+LI A+++ S +I LF M++ + P+ T V A + G
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS+ K G D Y+G++LL MY + A+ +F+ MP R+ VSW++MI+G+ + D
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
A++VF M+ E N L S++SA TS + V G +HS A+ NGL V++ AL
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V MY+KCG ++ A + F +KN +W+ M++G A G + A+ LF KM +G+ P
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHI 361
+ +++ACS L V EGK + + + ++ Y +VDM + G + +A
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMH---SFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 362 IRNMPTEPNAVILRSFLGACRNHG 385
+ +P+ V+ S + +G
Sbjct: 378 FECV-QQPDVVLWTSIITGYVQNG 400
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 179/349 (51%), Gaps = 3/349 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF-TRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q H++ +KT + + S + F R LF+ +P + ++ T+I YA +
Sbjct: 139 QAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTV-SWATMISGYASS 197
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +++++F+ M + + F V+ A + + G VHSL K GL + +
Sbjct: 198 DIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA C +D A FE ++ ++WS+M+ G+ ALK+F++M +
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ TLV +++AC+ L V G+ +HS+A G L + + +A+V+MY+KCG + A K
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +++ ++ WT +I+G NG ++L+ KM + P+ ++ +++L ACS L +
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
D+GK + + Y K + + M + G +++ Y I MP+
Sbjct: 438 DQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR 485
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 17/288 (5%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + + ++I Y + + L+ +M + P+ T V++AC + G +
Sbjct: 384 PDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQM 443
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ I K G + IG+ L MY C +D +F MP RDV+SW++MI+G
Sbjct: 444 HARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHG 503
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG--- 240
+ AL++F +M L P+ VT V+L+SAC+ + V G Y + E ++A
Sbjct: 504 NKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG---WEYFKMMFDEFNIAPMVEH 560
Query: 241 -TALVEMYSKCGHVEKAFK-VFNLMREKNLQSWTIMISGLADNGRGNYAISLFA--KMIQ 296
+V++ S+ G + +A + + + + L W I++ G N R NY + ++A K+++
Sbjct: 561 YACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILL-GACKNHR-NYELGVYAGEKLVE 618
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
G P+S ++ + S + LG + + + R+ + + GC
Sbjct: 619 LG-SPESSAYVLLSSIYTALG----DRENVERVRRIMKARGVNKEPGC 661
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P L+ + CT N+ G ++H+ + G + + + +Y+K H+ A +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 260 FNLM--REKNLQSWTIMISGLADN---GRGNYAISLFAKMIQ-TGLKPDSISFSAILSAC 313
F+ + +K+ SW +I+ + N ++AISLF +M++ + P++ + + + SA
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGC---------MVDMLGRAGLIEEAYHIIRN 364
S+L V GK A +K GC +++M + G + +A +
Sbjct: 129 SNLSDVVAGKQ-----AHSVAVKT-----GCSGDVYVGSSLLNMYCKTGFVFDARKLFDR 178
Query: 365 MPTEPNAV 372
MP E N V
Sbjct: 179 MP-ERNTV 185
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 234/428 (54%), Gaps = 3/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + +F+ +P P + LI AY
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP-HPSTVPWTALITAYMDA 150
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ + G+RPD+FT V+ AC R + G +V + G+ ++
Sbjct: 151 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVA 210
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+ A+ VF++M +D V+W +M+ G+ + P +AL +F M+
Sbjct: 211 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 270
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + +SACT L + G + + LGTAL++MY+KCG +A+ V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 330
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR+K++ W MI GL G A +L +M ++G+K + +F +L +C+H GL+
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I P +EHYGCMVD+L RAGL++EA+ ++ +MP NAVIL + LG
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 450
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H + L +L+L LEP NYV+ +++ S G W+ AA+L + + KG+ K
Sbjct: 451 GCKIHRNTELAEHVLKQLIL-LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEK 509
Query: 440 VPGCSWVK 447
VP CSWV+
Sbjct: 510 VPACSWVE 517
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 16/286 (5%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T P +K+ R + G +H+ K+ ++ ++ +LL +YA C + A+
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF+EMP V W+++I ++ +A+ V P+S T V +++AC + +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE++ A G+ V + TA V++Y KCG + KA +VF+ MR K+ +W M+ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY-----FDEMARV 332
A NG A+ LF M G+KPD + + LSAC+ LG +D G+ +DE
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE---- 303
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
+ P + ++DM + G EA+ + + M + NA+IL
Sbjct: 304 FLDNPVLG--TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMIL 347
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 231/397 (58%), Gaps = 8/397 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF+ +P + ++ T+I AY+ ++ + +++ ML+ G+RP+ +TY V++AC
Sbjct: 71 RNLFDEMP-DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDG 129
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L + +H I KVGL+SD ++ + L+ Y+ E A VF EM D+V W+S+
Sbjct: 130 LLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSI 186
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I GF + L ++ RMK A+ + TL S++ ACT L + G +H + +
Sbjct: 187 IGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL--KY 244
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ D+ L AL++MY KCG +E A +F +M EK++ SW+ MI+GLA NG A+ LF
Sbjct: 245 DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFE 304
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M G KP+ I+ +L ACSH GLV++G YF M + I P EHYGC++D+LGRA
Sbjct: 305 AMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRA 364
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G ++EA +I M EP+AV R LGACR H V L K +LKL+P Y+L
Sbjct: 365 GKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNV-DLAIYAAKEILKLDPADAGTYILL 423
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + S W+ AE+ + +G+ K PGCSW++V+
Sbjct: 424 SNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVS 460
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 6/300 (2%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+K + M + L D TY ++K C + VH +F G + ++ NTL+ M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y +D A+ +F+EMP R+VVSW++MI+ + + AL M PN T
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
S++ AC L+N+R +H + GLE DV + +AL++ YSK G A VFN M
Sbjct: 121 SSVLRACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+L W +I G A N G+ + L+ +M + D + +++L AC+ L L++ G+
Sbjct: 178 GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQV 237
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
V + ++DM + G +E+A + M TE + + + + +G
Sbjct: 238 H---VHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 9/170 (5%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
L++L + VH +H L L N ++ + SL LF + + +
Sbjct: 230 LLELGRQVH----VHVLKYDQDLILNNALLDMYCKCG---SLEDANLLFTRMMTEKDVIS 282
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG-SVHSLI 127
++T+I A+ S +++KLF+ M G +P+ T V+ AC L+ G S+
Sbjct: 283 WSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMK 342
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAG 176
G+D + ++ + ++D A + EM D V+W ++
Sbjct: 343 EHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 238/440 (54%), Gaps = 20/440 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSISLHF---------TRSLFNNLPVTPPLFAYN 70
QLH L + T + + ++ LHF TR+LFN +P +YN
Sbjct: 264 QQLHGLSVTTGFSRDASVGNQI--------LHFYSKHDRVLETRNLFNEMPELD-FVSYN 314
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I +Y++ ES+ LF EM G NF + ++ + +G VH
Sbjct: 315 VVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVA 374
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
DS ++GN+L+ MYA C+ D A+ +F+ + R VSW+++I+G+V LK+F
Sbjct: 375 TADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLF 434
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+M+ AN + T +++ A ++ G+ +H++ + +G +V G+ LV+MY+KC
Sbjct: 435 TKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 494
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G ++ A +VF M ++N SW +IS ADNG G AI F KMIQ+GL+PDS+S +L
Sbjct: 495 GSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVL 554
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
ACSH G V++G +F M+ +Y I P +HY CM+D+LGR G EA ++ MP EP+
Sbjct: 555 IACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 614
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP-ELGANYVLAASVSSLSGNWDTAAELM 429
++ S L ACR + + L + + L +E A YV +++ + +G W+ +
Sbjct: 615 EIMWSSVLNACRIY-KNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVK 673
Query: 430 VAINQKGLNKVPGCSWVKVN 449
A+ ++G+ KVP SWV+VN
Sbjct: 674 KAMRERGIKKVPAYSWVEVN 693
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 158/317 (49%), Gaps = 2/317 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NTLI Y K E+I LF +M ++G +P +FT+ V+KA +G +H L
Sbjct: 212 FNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSV 271
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G D +GN +L Y+ + + +F EMP D VS++ +I+ + + ++L
Sbjct: 272 TTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLN 331
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ + +++S +L +++ G +H A+V + + +G +LV+MY+
Sbjct: 332 LFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYA 391
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC ++A +F + +++ SWT +ISG G + LF KM L+ D +F+
Sbjct: 392 KCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFAT 451
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L A + + GK + R N++ G +VDM + G I++A + MP +
Sbjct: 452 VLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-D 509
Query: 369 PNAVILRSFLGACRNHG 385
NAV + + A ++G
Sbjct: 510 RNAVSWNALISAYADNG 526
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 175/363 (48%), Gaps = 10/363 (2%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP 65
+E L++ + L + K ++ NT I + LS + H LF+ +P
Sbjct: 51 VEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARH----LFDAMP-DRT 105
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ + L+ YA + E+ KLF +M ++ PD T+ ++ C + G VH+
Sbjct: 106 VVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHA 165
Query: 126 LIFKVGLDSDKY--IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
K+G D++ + + N LL+ Y + +D+A +FEE+ +D V+++++I G+
Sbjct: 166 FAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLY 225
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A+ +F +M+ + P+ T ++ A L + G+ +H +V G D ++G +
Sbjct: 226 TEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQI 285
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ YSK V + +FN M E + S+ ++IS + + +++LF +M G +
Sbjct: 286 LHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRN 345
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHII 362
F+ +LS ++L + G+ + + ++ H G +VDM + + +EA I
Sbjct: 346 FPFATMLSIAANLSSLQVGRQVHCQA--IVATADSILHVGNSLVDMYAKCEMFDEAELIF 403
Query: 363 RNM 365
+++
Sbjct: 404 KSL 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 35/231 (15%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
V + I K G ++D N + ++ A V++EMP ++ VS ++MI+G+V
Sbjct: 31 VDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGD 90
Query: 183 PS-------------------------------DALKVFHRMKLANESPNSVTLVSLVSA 211
S +A K+F +M + P+ VT +L+
Sbjct: 91 LSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPG 150
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALG--TALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
C + A +H++AV G + ++ L L++ Y + ++ A +F + +K+
Sbjct: 151 CNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSV 210
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
++ +I+G +G AI LF KM Q+G KP +FS +L A +GL D
Sbjct: 211 TFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAV--VGLHD 259
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/444 (32%), Positives = 254/444 (57%), Gaps = 18/444 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH+L +K +H+ ++ + + S S L+ +F +P + + L Y
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP-ERSVVTWTALFSGYTTA 190
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG---IGGSVHSLIFKVGLDSDK 136
E+I LF +M++ G+RPD++ F+V+ C+ +G G + + ++ + +
Sbjct: 191 GKHREAIDLFKKMVEMGVRPDSY---FIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNS 247
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ TL+ +YA C +++ A++VF+ M +D+V+WS+MI G+ + P + ++ F +M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQE 307
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ ++V +S+C SL + GE S + ++ + AL++MY+KCG + +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
F+VF M+EK++ ISGLA NG + ++F + + G+ PD +F +L C H
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ +G +F+ ++ VY +K T+EHYGCMVD+ GRAG++++AY +I +MP PNA++ +
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 377 FLGACRNHGQVLYLDDNLGKLLLK----LEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
L CR L D L + +LK LEP NYV +++ S+SG WD AAE+ +
Sbjct: 488 LLSGCR-----LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMM 542
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEM 456
N+KG+ K+PG SW+++ +G+ E
Sbjct: 543 NRKGMKKIPGYSWIEL-EGTVHEF 565
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 203/385 (52%), Gaps = 4/385 (1%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPV 62
+ I+TLI ++ T +HL Q+H + L H+T +++ + +L H++ LF++
Sbjct: 14 QQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQF 73
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
P +F YNTLI + E++ LF + K GL FT+P V+KAC R +G
Sbjct: 74 -PNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGID 132
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+HSL+ K G + D +LL +Y+ ++ A VFEE+P R VV+W+++ +G+
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGK 192
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A+ +F +M P+S +V ++SAC + ++ +GE I + ++ + + T
Sbjct: 193 HREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTT 252
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV +Y+KCG +EKA VF+ M EK++ +W+ MI G A N I F +M+Q LKPD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPD 312
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
S LS+C+ LG +D G+ + R + + ++DM + G + + +
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 363 RNMPTEPNAVILRSFLGACRNHGQV 387
+ M E + VI+ + + +G V
Sbjct: 372 KEMK-EKDIVIMNAAISGLAKNGHV 395
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 240/400 (60%), Gaps = 11/400 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +P + ++ +I YA+++ S E+++LF +M + + P+ FT+ V+++C
Sbjct: 199 VFEEMP-KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIE 257
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G VH + KVGLD + ++ N L+ +YA C +D + +F E+P R+ V+W++MI
Sbjct: 258 NLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIV 317
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V AL ++ M + VT S++ AC SL + G IHS ++ +
Sbjct: 318 GYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDK 377
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV +G AL++MY+KCG ++ A VF+++ E++ SW MISG + +G A+ F M
Sbjct: 378 DVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQ 437
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+T P+ ++F +ILSACS+ GL+D G+NYF M + Y I+P MEHY CMV +LGR+G +
Sbjct: 438 ETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHL 497
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVL 411
++A +I +P EPN + R+ LGAC V++ D +LG + +L+++P+ A +VL
Sbjct: 498 DKAVKLIEEIPLEPNVKVWRALLGAC-----VIHNDVDLGIMSAQQILQIDPQDEATHVL 552
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
+++ + + W++ A + + KG+ K PG SW++ N G
Sbjct: 553 LSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIE-NQG 591
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 213/420 (50%), Gaps = 39/420 (9%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S++ R F+ + + ++ ++ YA+ +S++LF EM G P++FT+ V+
Sbjct: 91 SVNSARQAFDAIA-CKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVL 149
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC +G SVH + K + D Y+G LL +Y + + VFEEMP DV+
Sbjct: 150 KACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVI 209
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
WS MI+ + + +A+++F +M+ A PN T S++ +C S+ N++ G+ +H +
Sbjct: 210 PWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHV 269
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ GL+ +V + AL+++Y+KCG ++ + K+F + +N +W MI G +G G+ A+
Sbjct: 270 LKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKAL 329
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNYFDE-------MARVY 333
SL+ M++ ++ +++S++L AC+ L ++ G K +D+ + +Y
Sbjct: 330 SLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMY 389
Query: 334 NIKPTMEHYGCMVDMLGRA---------------GLIEE---AYHIIRNMPTEPNAVILR 375
++++ + DML GL+ E A+ +++ PN +
Sbjct: 390 AKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFV 449
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLK---LEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
S L AC N G +L + N K +++ +EP + +Y + SG+ D A +L+ I
Sbjct: 450 SILSACSNAG-LLDIGQNYFKSMVQDYGIEPCM-EHYTCMVWLLGRSGHLDKAVKLIEEI 507
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 155/301 (51%), Gaps = 1/301 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ TLI+ Y ++ E + LF + + G + F + ++K + S+H+ I
Sbjct: 8 SFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACI 67
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+K+G +S+ ++G L+ YA C ++ A+ F+ + +D+VSW+ M+A + D D+L
Sbjct: 68 YKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSL 127
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F M++ +PN T ++ AC L G+S+H + E+D+ +G L+++Y
Sbjct: 128 QLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLY 187
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+K G +VF M + ++ W+ MIS A + + A+ LF +M + + P+ +F+
Sbjct: 188 TKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFA 247
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++L +C+ + + GK + +V + + ++D+ + G ++ + + +P
Sbjct: 248 SVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN 306
Query: 368 E 368
Sbjct: 307 R 307
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP R+ VS+ ++I G+V + + +F R+ N +++ S+
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
S+H+ G E + +GTAL++ Y+ CG V A + F+ + K++ SWT M++ A+N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
R ++ LFA+M G P+ +F+ +L AC L GK+
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKS 163
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 264/478 (55%), Gaps = 40/478 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTL 72
+ V ++ +KT +D + + + I +S + + LF+ + T ++N +
Sbjct: 257 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM-TTRDSVSWNVM 315
Query: 73 IRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
I Y + ++I F EM + G +PD T + AC + +G +H+ + K
Sbjct: 316 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-E 374
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC----------- 180
L I N LL MYA C +++A+ +F+EM +++V+ W+SMI+G++ C
Sbjct: 375 LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 434
Query: 181 DSP--------------------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
SP DA+ +F M++ P+ T+V+L++ C L +
Sbjct: 435 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQ 494
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IH Y N + +DV +GTAL+EMYSKCG V+K+ ++F + +K+ SWT +I GLA
Sbjct: 495 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 554
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG+ + A+ LF++M + G KPD I+F +LSACSH GLV+EG+ +F+ M +V+ I+P +E
Sbjct: 555 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 614
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLGACRNHGQVLYLDDNLGKL 397
HYGC++D+LGRAGL++EA +I+ +P E +++ + L ACR H V + + L K
Sbjct: 615 HYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNV-DMGERLAKK 673
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
L +E + + L A++ + W+ A ++ + + G+ K+PGCS ++V DG E
Sbjct: 674 LENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEV-DGIVHE 730
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 198/396 (50%), Gaps = 44/396 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K++ L Q+ + + L+ + I++ F S +L + +FN + P LF YN
Sbjct: 154 KSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQ-DPSLFVYN 212
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+++ YAK + + LF ++ + GL PD FTYPFV+KA G + G V I K
Sbjct: 213 VMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKT 272
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G+D D Y+ N+L+ MY ++ AK +F+EM RD VSW+ MI+G+V C DA+ F
Sbjct: 273 GMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTF 332
Query: 191 HRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
M+ NE P+ T+VS +SACT+L N+ G+ IH+Y V L + AL++MY+K
Sbjct: 333 REMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNALLDMYAK 391
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLAD--------------------------NGR 283
CG + A +F+ M KN+ WT MISG + NG
Sbjct: 392 CGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGY 451
Query: 284 GNY-----AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNI 335
+ A++LF +M +KPD + +L+ C+ LG +++GK Y DE ++
Sbjct: 452 VQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDV 511
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+++M + G ++++ I + + A
Sbjct: 512 VVGT----ALIEMYSKCGCVDKSLEIFYELEDKDTA 543
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 138/300 (46%), Gaps = 18/300 (6%)
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE----- 151
LR T ++ C + + S IF++GL+ D+ +T+ ++ A C +
Sbjct: 136 LRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDR---DTINKLMAFCADSSLGN 192
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+ A+ +F + + ++ M+ + L +F +++ P+ T ++ A
Sbjct: 193 LRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKA 252
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
L +VR GE + + V G++LD + +L++MY + +VE A K+F+ M ++ SW
Sbjct: 253 IGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSW 312
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACS---HLGLVDEGKNYFD 327
+MISG R AI+ F +M Q G KPD + + LSAC+ +L L DE NY
Sbjct: 313 NVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR 372
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ + T ++DM + G + A +I M + N + S + N G +
Sbjct: 373 K-----ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDL 426
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 260/478 (54%), Gaps = 39/478 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPL 66
L+ K+ + Q+H + T L + ++ + L+S+ + + +F++ P P L
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFP-QPDL 65
Query: 67 FAYNTLIRAYA-KTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F YNT+I+ A T+ S +S F +++ L P+ +++ F K CG + + G V
Sbjct: 66 FLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVR 125
Query: 125 SLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKEID 153
K+GL+++ ++ N L+ MY A ++D
Sbjct: 126 VHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMD 185
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F+EMP +DVVSW++MI+G + +AL +FH M SPN TL S ++AC
Sbjct: 186 EARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACA 245
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN--LMREKNLQSW 271
+L+ + G +H Y N ++++ L L++MY+KCG +E A K+FN ++ + W
Sbjct: 246 NLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPW 305
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI G A +G+ AI +F +M + P+ ++F A+L+ACSH V+EG+ YF+ MA
Sbjct: 306 NAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMAS 365
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y +KP +EHYGC+VD+LGRAG ++EA II +M P+ I + L AC+ H +
Sbjct: 366 HYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDA-EMG 424
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ +GK++ +L+P +VL A++ SL+GNW+ A L I + G K PGCS +++N
Sbjct: 425 ERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELN 482
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 249/434 (57%), Gaps = 5/434 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H +KT + + +R I L + L R + + +P + ++ +I Y++
Sbjct: 497 QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP-ERNVVSWTAMISGYSQ 555
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E++ LF EML +G P+ FT+ V+ +C +G +HSL+ K +S ++
Sbjct: 556 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++LL MYA +I A+ VF+ +P RDVVS +++I+G+ +AL +F R++
Sbjct: 616 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 675
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
N VT S+++A + L + G +HS+ + L V L +L++MYSKCG + + +
Sbjct: 676 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 735
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLG 317
+F+ M E+ + SW M+ G + +G G A+ LF M + +KPDS++F A+LS CSH G
Sbjct: 736 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 795
Query: 318 LVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ D G F EM + +P +EHYGC+VD+ GRAG +EEA+ I+ MP EP A I S
Sbjct: 796 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 855
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H Q +++ + + + LL++E E NYV+ +++ + +G WD + + +K
Sbjct: 856 LLGACRVH-QNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 914
Query: 437 LNKVPGCSWVKVND 450
+ K PG SW++++
Sbjct: 915 VIKEPGRSWIELDQ 928
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 172/345 (49%), Gaps = 13/345 (3%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIK-LFDEMLKTGLRPD 100
+L+S+S R L + P P KT CS +K EM GL +
Sbjct: 427 VLSSISNPFSRQRILLSTFPANSPDL----------KTLCSNRQLKEALLEMGIQGLEVE 476
Query: 101 NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
Y V+ C I G VH+ + K + Y+ L+ +Y C+ + A+ V +
Sbjct: 477 FQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLD 536
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
EMP R+VVSW++MI+G+ S+AL +F M ++ +PN T +++++CTS +
Sbjct: 537 EMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 596
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IHS + E + +G++L++MY+K G + +A +VF+ + E+++ S T +ISG A
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
G A+ LF ++ + G++ + ++++++L+A S L +D G+ + R + +
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA-KLPFYVV 715
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++DM + G + + I +MP E + + L HG
Sbjct: 716 LQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHG 759
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 246/438 (56%), Gaps = 14/438 (3%)
Query: 21 QLHTLFLKTSL--DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH+ +++ L D ++ + S S+ R +F+ + + ++ LI Y K
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMK 348
Query: 79 T-SCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ + E+I LF EM+ G + P++FT+ KACG +G V FK GL S+
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N+++ M+ ++ A+ FE + +++VS+++ + G + A K+ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
++ T SL+S ++ ++R GE IHS V GL + + AL+ MYSKCG ++ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VFN M +N+ SWT MI+G A +G + F +MI+ G+KP+ +++ AILSACSH+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV EG +F+ M + IKP MEHY CMVD+L RAGL+ +A+ I MP + + ++ R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
FLGACR H LGKL +L+L+P A Y+ +++ + +G W+ + E+ +
Sbjct: 649 FLGACRVHSNT-----ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 433 NQKGLNKVPGCSWVKVND 450
++ L K GCSW++V D
Sbjct: 704 KERNLVKEGGCSWIEVGD 721
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 186/361 (51%), Gaps = 18/361 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+++ ++ Y +++IK+F E L+ GL P+++ Y V++AC +G+G +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 128 FKVG-LDSDKYIGNTLLRMYAACKE-IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K G +SD +G +L+ M+ + + A VF++M +VV+W+ MI + P +
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++ F M L+ + TL S+ SAC L N+ G+ +HS+A+ +GL DV +LV+
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVD 310
Query: 246 MYSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADNGR-GNYAISLFAKMIQTG-LK 300
MY+KC G V+ KVF+ M + ++ SWT +I+G N AI+LF++MI G ++
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ +FS+ AC +L GK + A + ++ M ++ +E+A
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 361 IIRNMPTEPNAVILRSFL-GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ +E N V +FL G CRN L + L E ELG + AS+ LS
Sbjct: 430 AFESL-SEKNLVSYNTFLDGTCRN----LNFEQAFKLLSEITERELGVSAFTFASL--LS 482
Query: 420 G 420
G
Sbjct: 483 G 483
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 63/427 (14%)
Query: 85 SIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++ D M + G+RP D+ T+ ++K+C R +G VH+ + + ++ D + N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 144 RMYAACKEIDVAKAVFEEMP---VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+Y+ + A+ VFE M RDVVSWS+M+A + DA+KVF P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSKCGH-VEKAFK 258
N +++ AC++ V G + + G E DV +G +L++M+ K + E A+K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL-- 316
VF+ M E N+ +WT+MI+ G AI F M+ +G + D + S++ SAC+ L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 317 --------------GLVDE-------------GKNYFDEMARVYNIKPTMEHYGCM---- 345
GLVD+ D+ +V++ ME + M
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFD---RMEDHSVMSWTA 341
Query: 346 --VDMLGRAGLIEEAYHIIRNMPT----EPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+ L EA ++ M T EPN S AC N D +GK +L
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS-----DPRVGKQVL 396
Query: 400 --KLEPELGANYVLAASVSSL---SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ L +N +A SV S+ S + A ++++K L S+ DG+
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL-----VSYNTFLDGTCR 451
Query: 455 EMSKETA 461
++ E A
Sbjct: 452 NLNFEQA 458
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 264/479 (55%), Gaps = 40/479 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTL 72
+ V ++ +KT +D + + + I +S + + LF+ + T ++N +
Sbjct: 211 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM-TTRDSVSWNVM 269
Query: 73 IRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
I Y + ++I F EM + G +PD T + AC + +G +H+ + K
Sbjct: 270 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-E 328
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC----------- 180
L I N LL MYA C +++A+ +F+EM +++V+ W+SMI+G++ C
Sbjct: 329 LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 388
Query: 181 DSP--------------------SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
SP DA+ +F M++ P+ T+V+L++ C L +
Sbjct: 389 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQ 448
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IH Y N + +DV +GTAL+EMYSKCG V+K+ ++F + +K+ SWT +I GLA
Sbjct: 449 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 508
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG+ + A+ LF++M + G KPD I+F +LSACSH GLV+EG+ +F+ M +V+ I+P +E
Sbjct: 509 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 568
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLGACRNHGQVLYLDDNLGKL 397
HYGC++D+LGRAGL++EA +I+ +P E +++ + L ACR H V + + L K
Sbjct: 569 HYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNV-DMGERLAKK 627
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
L +E + + L A++ + W+ A ++ + + G+ K+PGCS ++V DG E
Sbjct: 628 LENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEV-DGIVHEF 685
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 198/396 (50%), Gaps = 44/396 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K++ L Q+ + + L+ + I++ F S +L + +FN + P LF YN
Sbjct: 108 KSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQ-DPSLFVYN 166
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+++ YAK + + LF ++ + GL PD FTYPFV+KA G + G V I K
Sbjct: 167 VMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKT 226
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G+D D Y+ N+L+ MY ++ AK +F+EM RD VSW+ MI+G+V C DA+ F
Sbjct: 227 GMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTF 286
Query: 191 HRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
M+ NE P+ T+VS +SACT+L N+ G+ IH+Y V L + AL++MY+K
Sbjct: 287 REMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNALLDMYAK 345
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLAD--------------------------NGR 283
CG + A +F+ M KN+ WT MISG + NG
Sbjct: 346 CGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGY 405
Query: 284 GNY-----AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNI 335
+ A++LF +M +KPD + +L+ C+ LG +++GK Y DE ++
Sbjct: 406 VQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDV 465
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+++M + G ++++ I + + A
Sbjct: 466 VVGT----ALIEMYSKCGCVDKSLEIFYELEDKDTA 497
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 243/454 (53%), Gaps = 34/454 (7%)
Query: 10 IQLSKTVHHLHQLHT-----LFLKTSL----DHNTCIISRFILTSLSISLHFTRSLFNNL 60
+ LSK +H +H + T F+ T+L N C+ +L F R+ F+
Sbjct: 440 LSLSKQIH-VHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVL--------FGRNNFD-- 488
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
L A+N ++ Y ++ ++++LF M K G R D+FT V+K CG I G
Sbjct: 489 -----LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG 543
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ K G D D ++ + +L MY C ++ A+ F+ +PV D V+W+++I+G +
Sbjct: 544 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIEN 603
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
AL VF +M+L P+ T+ +L A + L + G IH+ A+ D +G
Sbjct: 604 GEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG 663
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
T+LV+MY+KCG ++ A+ +F + N+ +W M+ GLA +G G A+ LF +M G+K
Sbjct: 664 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIK 723
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD ++F +LSACSH GLV E Y M R Y IKP +EHY C+ D LGRAGL++EA +
Sbjct: 724 PDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAEN 783
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVS 416
+I +M E +A + R+ L ACR G D GK LL+LEP + YVL +++
Sbjct: 784 LIDSMSMEASASMYRTLLAACRVQG-----DTETGKRVATKLLELEPLDSSAYVLLSNMY 838
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + WD + + K PG SW++V +
Sbjct: 839 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 159/334 (47%), Gaps = 12/334 (3%)
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
N+ + + N ++ Y +K F +M+++ L D T+ V+ R +
Sbjct: 279 NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
+G VH + K+GLD + N+L+ MY ++I +A+ VF M RD++SW+S+IAG
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNGLELD 236
D +A+ +F ++ P+ T+ S++ A +SL + + IH +A+ D
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ TAL++ YS+ +++A +F +L +W M+SG + G+ + LFA M +
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRA 352
G + D + + +L C L +++GK Y IK + ++DM +
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQ-----VHAYAIKSGYDLDLWVSSGILDMYVKC 572
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G + A ++P P+ V + + C +G+
Sbjct: 573 GDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGE 605
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G H+ I + + ++++ N L+ MY+ C + A+ VF++MP RD+VSW+S++A +
Sbjct: 64 LGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYA 123
Query: 179 -----ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
++ +A +F ++ + +TL ++ C V A ES H YA GL
Sbjct: 124 QSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGL 183
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D + ALV +Y K G V++ +F M +++ W +M+ + G AI L +
Sbjct: 184 DGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 243
Query: 294 MIQTGLKPDSISF 306
+GL P+ I+
Sbjct: 244 FHTSGLHPNEITL 256
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 38/273 (13%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSI-----ESIKLFDEMLKTGLRPDNFT 103
SL + R +F+ +P L ++N+++ AYA++S + E+ LF + + + T
Sbjct: 96 SLTYARRVFDKMP-ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMT 154
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
++K C + S H K+GLD D ++ L+ +Y ++ + +FEEMP
Sbjct: 155 LSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMP 214
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDVV W+ M+ ++ +A+ + + PN +TL L S I+ E+
Sbjct: 215 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL-----SRISGDDSEA 269
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+ NG + +A+ E+ S+ ++SG G+
Sbjct: 270 GQVKSFENGND-----ASAVSEIISR----------------------NKILSGYLHAGQ 302
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+ + F M+++ L+ D ++F +L+ L
Sbjct: 303 YSALLKCFMDMVESDLECDQVTFILVLATAVRL 335
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 255/444 (57%), Gaps = 18/444 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH+L +K +H+ ++ + + S S L+ LF+ +P + + L Y +
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTALFSGYTTS 190
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG---IGGSVHSLIFKVGLDSDK 136
E+I LF +M++ G++PD++ F+V+ C+ +G G + + ++ + +
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSY---FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ TL+ +YA C +++ A++VF+ M +D+V+WS+MI G+ + P + +++F +M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ ++V +S+C SL + GE S + ++ + AL++MY+KCG + +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
F+VF M+EK++ ISGLA NG + ++F + + G+ PD +F +L C H
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ +G +F+ ++ VY +K T+EHYGCMVD+ GRAG++++AY +I +MP PNA++ +
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 377 FLGACRNHGQVLYLDDNLGKLLLK----LEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
L CR L D L + +LK LEP NYV +++ S+ G WD AAE+ +
Sbjct: 488 LLSGCR-----LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEM 456
N+KG+ K+PG SW+++ +G E
Sbjct: 543 NKKGMKKIPGYSWIEL-EGKVHEF 565
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 205/388 (52%), Gaps = 10/388 (2%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT 63
+ I+TLI ++ TV+HL Q+H + L H+T +++ L +L F ++ ++ L +
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLL----LKRTLFFRQTKYSYLLFS 69
Query: 64 ----PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P +F YN+LI + E++ LF + K GL FT+P V+KAC R +
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +HSL+ K G + D +LL +Y+ ++ A +F+E+P R VV+W+++ +G+
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+A+ +F +M P+S +V ++SAC + ++ +GE I Y ++ + +
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
T LV +Y+KCG +EKA VF+ M EK++ +W+ MI G A N I LF +M+Q L
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KPD S LS+C+ LG +D G+ + R + + ++DM + G + +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ + M E + VI+ + + +G V
Sbjct: 369 EVFKEMK-EKDIVIMNAAISGLAKNGHV 395
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 241/437 (55%), Gaps = 15/437 (3%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q H L +K L+ N S I + S + ++++P + + N LI YA
Sbjct: 439 QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP-ERSVVSVNALIAGYAL 497
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL-DSDKY 137
+ ESI L EM GL+P T+ ++ C + +G +H I K GL ++
Sbjct: 498 KNTK-ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEF 556
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+G +LL MY + + A +F E ++ +V W+++I+G + + AL ++ M+
Sbjct: 557 LGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDN 616
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N SP+ T V+++ AC L ++ G IHS G +LD +ALV+MY+KCG V+ +
Sbjct: 617 NISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSS 676
Query: 257 FKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+VF L +K++ SW MI G A NG A+ +F +M Q+ + PD ++F +L+ACSH
Sbjct: 677 VQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSH 736
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
G V EG+ FD M Y I+P ++HY CMVD+LGR G ++EA I + EPNA+I
Sbjct: 737 AGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWA 796
Query: 376 SFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+ LGACR HG D+ G K L++LEP+ + YVL +++ + SGNWD A L
Sbjct: 797 NLLGACRIHG-----DEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRT 851
Query: 432 INQKGLNKVPGCSWVKV 448
+ +K + K+PGCSW+ V
Sbjct: 852 MIKKDIQKIPGCSWIVV 868
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 145/260 (55%), Gaps = 2/260 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + + +N ++ Y++ ++LF +M+ G+ PD FTY ++ C
Sbjct: 272 RQVFDAIS-QKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCAC 330
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ +G +HS I K S+ ++ N L+ MYA + A FE M RD +SW+++
Sbjct: 331 FEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAI 390
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+V + + A +F RM L P+ V+L S++SAC ++ + AG+ H +V GL
Sbjct: 391 IVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGL 450
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E ++ G++L++MYSKCG ++ A K ++ M E+++ S +I+G A +I+L +
Sbjct: 451 ETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKE-SINLLHE 509
Query: 294 MIQTGLKPDSISFSAILSAC 313
M GLKP I+F++++ C
Sbjct: 510 MQILGLKPSEITFASLIDVC 529
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 160/313 (51%), Gaps = 2/313 (0%)
Query: 55 SLFNNLPV-TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
LF +P+ + A+N +I +AKT+ E++ F +M K G++ T V+ A
Sbjct: 170 QLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIAS 229
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH+ K G +S Y+ ++L+ MY C+ D A+ VF+ + ++++ W++M
Sbjct: 230 LAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAM 289
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ + S+ +++F M P+ T S++S C + G +HS +
Sbjct: 290 LGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRF 349
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++ + AL++MY+K G +++A K F M ++ SW +I G A SLF +
Sbjct: 350 TSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRR 409
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
MI G+ PD +S ++ILSAC ++ +++ G+ F ++ ++ + ++DM + G
Sbjct: 410 MILDGIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCG 468
Query: 354 LIEEAYHIIRNMP 366
I++A+ +MP
Sbjct: 469 DIKDAHKTYSSMP 481
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 143/308 (46%), Gaps = 50/308 (16%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++ + + +G PD FT+ + AC + + +G +VHS + K GL+S + L+ +
Sbjct: 32 LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91
Query: 146 YAACKEIDVAKAVFEEMPVRDV--VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
YA C + A+ +F P + VSW+++I+G+V P +AL +F +M+ + P+ V
Sbjct: 92 YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR-NSAVPDQV 150
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
LV++++A SL G ++ A ++F M
Sbjct: 151 ALVTVLNAYISL-----------------------------------GKLDDACQLFQQM 175
Query: 264 --REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+N+ +W +MISG A A++ F +M + G+K + +++LSA + L ++
Sbjct: 176 PIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNH 235
Query: 322 GKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
G + + IK E +++M G+ + ++A + + ++ N ++ +
Sbjct: 236 GL-----LVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF-DAISQKNMIVWNAM 289
Query: 378 LGACRNHG 385
LG +G
Sbjct: 290 LGVYSQNG 297
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
S L+ + + SP+ T +SAC L N+ G ++HS + +GLE
Sbjct: 27 SSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQG 86
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQ--SWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL+ +Y+KC + A +F +L SWT +ISG G + A+ +F KM + +
Sbjct: 87 ALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV 146
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEM 329
PD ++ +L+A LG +D+ F +M
Sbjct: 147 -PDQVALVTVLNAYISLGKLDDACQLFQQM 175
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 273/554 (49%), Gaps = 104/554 (18%)
Query: 3 SRHI--ETLIQLSK--TVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLF 57
SR I E L L K ++ + QLH ++ +L + I + I SL + +F
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVF 74
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
N + P + N+LIRA+A S ++ +F EM + GL DNFTYPF++KAC +
Sbjct: 75 NQVQ-EPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWL 133
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK--------------------------- 150
+ +H+ I K+GL SD Y+ N L+ Y+ C
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 151 ------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM----------- 193
E+ A+ +F+EMP RD++SW++M+ G+ C S A ++F +M
Sbjct: 194 GLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTM 253
Query: 194 ------------------KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
K+ + N VT +++ ++ + + V +GL
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRF 313
Query: 236 D----------------VALG-------------------TALVEMYSKCGHVEKAFKVF 260
D ++LG AL++MY+KCG ++KAF VF
Sbjct: 314 DAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVF 373
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
N M +K+L SW M+ GL +G G AI LF++M + G+ PD ++F A+L +C+H GL+D
Sbjct: 374 NDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLID 433
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG +YF M +VY++ P +EHYGC+VD+LGR G ++EA +++ MP EPN VI + LGA
Sbjct: 434 EGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR H +V + L L+KL+P NY L +++ + + +W+ A++ + G+ K
Sbjct: 494 CRMHNEVDIAKEVLDN-LVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 552
Query: 441 PGCSWVKVNDGSAE 454
G S V++ DG E
Sbjct: 553 SGASSVELEDGIHE 566
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 241/431 (55%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +K++L N C+ + + + +L LF+ + + P+ ++N +I A +
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPV-SWNAIITACEQN 438
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+++ F ML++ + PD FTY V+KAC G VH I K G+ ++G
Sbjct: 439 ESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG 498
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ MY+ C ++ A+ + + + +VSW+++I+GF D+ + F M
Sbjct: 499 SALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++ T +++ C +L V G+ IH+ + L DV + + LV+MYSKCG++ + +
Sbjct: 559 PDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLM 618
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +++ +W MI G A +G G A+ LF M+ +KP+ +F ++L ACSH+G
Sbjct: 619 FRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNA 678
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G YF +MA +Y ++P +EHY CMVD+LGR+G +EEA +I++MP E +A+I R+ L
Sbjct: 679 KKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ G V + + LLKL+PE + Y L +++ + +G W +++ + L K
Sbjct: 739 ICKIQGNV-EVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKK 797
Query: 440 VPGCSWVKVND 450
PGCSW++V D
Sbjct: 798 EPGCSWIEVKD 808
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 11/360 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ +++FN++P + ++N+LI Y + +SI +F +M G+ D+ T +K
Sbjct: 106 MELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLK 165
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C +G +H + ++G D D G+ L+ MYA C ++ + VF E+P ++ +S
Sbjct: 166 ICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWIS 225
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WS+ IAG V D LK+F M+ + T S+ +C L R G +H +A+
Sbjct: 226 WSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHAL 285
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
DV +GTA ++MY+KC ++ A+K+F+L+ + NLQS+ MI G A N +G A
Sbjct: 286 KTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFK 345
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF ++ + D +S S LSA + + EG +A N+ + ++DM
Sbjct: 346 LFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ-LHGLAIKSNLSSNICVANAILDMY 404
Query: 350 GRAGLIEEAYHIIRNM----PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL-KLEPE 404
G+ G + EA + M P NA+I AC + + G +L K+EP+
Sbjct: 405 GKCGALVEASGLFDEMEIRDPVSWNAIIT-----ACEQNESEGKTLSHFGAMLRSKMEPD 459
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 3/347 (0%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LKT + + + + + ++ LF+ LP L +YN +I YA+
Sbjct: 279 QLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP-DHNLQSYNAMIIGYARN 337
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ KLF ++ K D + + A G +H L K L S+ +
Sbjct: 338 EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVA 397
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N +L MY C + A +F+EM +RD VSW+++I +S L F M +
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T S++ AC G +H + +G+ L + +G+ALV+MYSKCG +E+A K+
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ E+ + SW +ISG + + + F+ M++ G++PD+ +++ +L C++L V
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
GK +M ++ + + +VDM + G + ++ + R P
Sbjct: 578 GLGKQIHAQMIKL-ELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP 623
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 19/364 (5%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H + ++ D++ S + + + SL + +F+ LP +++ I +
Sbjct: 178 QIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELP-DKNWISWSAAIAGCVQN 236
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +KLF EM + G+ TY V ++C +G +H K SD +G
Sbjct: 237 DQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVG 296
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L MYA C + A +F +P ++ S+++MI G+ + A K+F +++ + S
Sbjct: 297 TATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFS 356
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ V+L +SA + G +H A+ + L ++ + A+++MY KCG + +A +
Sbjct: 357 FDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGL 416
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M ++ SW +I+ N +S F M+++ ++PD ++ ++L AC+
Sbjct: 417 FDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACA----- 471
Query: 320 DEGKNYFDEMARVYN--IKPTMEHY----GCMVDMLGRAGLIEEA----YHIIRNMPTEP 369
G+ F V+ IK M +VDM + G++EEA Y +
Sbjct: 472 --GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSW 529
Query: 370 NAVI 373
NA+I
Sbjct: 530 NAII 533
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 32/246 (13%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
T+ + + C + G H+ + G ++ N L++MY C ++ A VFEEM
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 163 PVR--------------------------------DVVSWSSMIAGFVACDSPSDALKVF 190
P R DVVSW+S+I+G++ ++ VF
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+M+ + TL + C+ L + G IH AV G + DV G+ALV+MY+KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+E + VF+ + +KN SW+ I+G N + + LF +M + G+ +++++
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 311 SACSHL 316
+C+ L
Sbjct: 266 RSCAGL 271
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 240/421 (57%), Gaps = 10/421 (2%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNL-PVTPPLF-------AYNTLIRAYAKTSCSIESIK 87
C+ F+ T L IS++ SL +N V F YN L+ Y S E++
Sbjct: 80 CVFEPFVQTGL-ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVL 138
Query: 88 LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA 147
LF +M + G+ ++ T ++ AC + + +G S+H K G DSD + N + MY
Sbjct: 139 LFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYM 198
Query: 148 ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C ++ A+ +F+EMPV+ ++SW++M++G+ ++ L+++ M + P+ VTLV
Sbjct: 199 KCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVG 258
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++S+C +L G + +G + L AL+ MY++CG++ KA VF+ M E+
Sbjct: 259 VLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERT 318
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L SWT +I G +G G A+ LF +MI++G++PD +F +LSACSH GL D+G YF
Sbjct: 319 LVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK 378
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M R Y ++P EHY CMVD+LGRAG ++EA +I +MP +P+ + + LGAC+ H V
Sbjct: 379 MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 438
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L + + +++LEPE YVL +++ S + N + + + +K L K PGCS+V+
Sbjct: 439 -ELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVE 497
Query: 448 V 448
+
Sbjct: 498 L 498
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 186/364 (51%), Gaps = 10/364 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NT +R AK ++++ L+ +ML+ G RP+ FT+PF +K+C L +G H I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE--MPVRDVVSWSSMIAGFVACDSPSDA 186
KVG + ++ L+ MY +D A+ VFEE + V ++++++G+V+ S+A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F +M NSVTL+ L+ AC S IN+ G S+H + G + DV++ + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG V A K+F+ M K L SW M+SG A NG + L+ M G+ PD ++
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 307 SAILSACSHLGLVDEGKNY-FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+LS+C++LG G F A + P + + +++M R G + +A + M
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 314
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK--LEPELGANYVLAASVSSLSGNWD 423
P E V + +G HG + L K +++ +EP+ G +V S S +G D
Sbjct: 315 P-ERTLVSWTAIIGGYGMHGHG-EIAVQLFKEMIRSGIEPD-GTAFVCVLSACSHAGLTD 371
Query: 424 TAAE 427
E
Sbjct: 372 QGLE 375
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 228/400 (57%), Gaps = 2/400 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ + V + ++ +IR YA+ S ++ LF M + G++PD TY ++
Sbjct: 313 SIEGARRVFDKMKVRD-VVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHII 371
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + + +HS + + G +D + L+ MYA C I A+ VF+ M RDVV
Sbjct: 372 NACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVV 431
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SWS+MI +V +A + FH MK N P+ VT ++L++AC L + G I++ A
Sbjct: 432 SWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQA 491
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ L + +G AL+ M K G +E+A +F M ++++ +W +MI G + +G A+
Sbjct: 492 IKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREAL 551
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M++ +P+S++F +LSACS G V+EG+ +F + I PTME YGCMVD+
Sbjct: 552 DLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDL 611
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG ++EA +I MP +PN+ I + L ACR +G L + + + L EP GA
Sbjct: 612 LGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGN-LDVAERAAERCLMSEPYDGAV 670
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
YV + + + +G W+ A++ + +G+ K GC+W++V
Sbjct: 671 YVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEV 710
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 179/350 (51%), Gaps = 3/350 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+ L + +N +I YAK+ ++ +LF M + G +P+ ++ ++
Sbjct: 212 SMDGARQVFDGL-YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL 270
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
C + G +VH+ GL D + L+RMY C I+ A+ VF++M VRDVV
Sbjct: 271 DGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVV 330
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI G+ + DA +F M+ P+ +T + +++AC S ++ IHS
Sbjct: 331 SWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQV 390
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V G D+ + TALV MY+KCG ++ A +VF+ M +++ SW+ MI +NG G A
Sbjct: 391 VRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAF 450
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
F M + ++PD +++ +L+AC HLG +D G + + + ++ + +++M
Sbjct: 451 ETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA-DLVSHIPVGNALINM 509
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+ G IE A +I NM + + V +G HG D ++L
Sbjct: 510 NVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGNAREALDLFDRML 558
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 179/371 (48%), Gaps = 44/371 (11%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R F+++ + +N +I YA+ E+ LF +M+ + P T+ V+ AC
Sbjct: 115 ARQTFDSVE-NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACS 173
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G H+ + KVG SD IG L+ MY +D A+ VF+ + RDV +++
Sbjct: 174 SPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNV 233
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI G+ A ++F+RM+ PN ++ +S++ C++ + G+++H+ + G
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L DV + TAL+ MY CG +E A +VF+ M+ +++ SWT+MI G A+N A LFA
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFA 353
Query: 293 KMIQTGLKPDSISFSAILSACS-------------------------------HL----G 317
M + G++PD I++ I++AC+ H+ G
Sbjct: 354 TMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCG 413
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVIL 374
+ + + FD M+R + + M+ G EEA +H+++ EP+ V
Sbjct: 414 AIKDARQVFDAMSR-----RDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTY 468
Query: 375 RSFLGACRNHG 385
+ L AC + G
Sbjct: 469 INLLNACGHLG 479
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 123/218 (56%), Gaps = 6/218 (2%)
Query: 100 DNFTYPFVVKACGRCLLI---GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAK 156
D+ TY VK RC+++ G+G V I + G + Y NTL+++++ C + A+
Sbjct: 60 DSRTY---VKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEAR 116
Query: 157 AVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
F+ + + VV+W+++IAG+ +A +F +M P+ +T + ++ AC+S
Sbjct: 117 QTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPA 176
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
++ G+ H+ + G D +GTALV MY K G ++ A +VF+ + ++++ ++ +MI
Sbjct: 177 GLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIG 236
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
G A +G G A LF +M Q G KP+ ISF +IL CS
Sbjct: 237 GYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%)
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
V HR+ + +S T V L C L + G+ + + + +G +L++ L++++S
Sbjct: 48 VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
CG++ +A + F+ + K + +W +I+G A G A +LF +M+ ++P I+F
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167
Query: 309 ILSACSHLGLVDEGKNYFDEMARV 332
+L ACS + GK + ++ +V
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKV 191
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 265/509 (52%), Gaps = 69/509 (13%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTP 64
+L+ +++ +L Q+H KT LD + I + +L S+ +L + R LF + P P
Sbjct: 10 SLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP-NP 68
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSV 123
+F +NTLIR A++ S+ F EM + P D+F++ F++KA + G +
Sbjct: 69 DVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE---------------------- 161
H GLD+ ++G TL+ MY+ C + AK VFEE
Sbjct: 129 HCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDV 188
Query: 162 ---------MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL---- 208
MP R++ SW+ M+AG+ A K+F M + ++ S +V
Sbjct: 189 KGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNG 248
Query: 209 ---------------------------VSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+SAC + G+ +H + +G V++
Sbjct: 249 FFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNN 308
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
AL++ YSKCG+V A VF M EK ++ SWT MI+GLA +G G AI LF +M ++G++
Sbjct: 309 ALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIR 368
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD I+F +IL ACSH GL+++G YF +M +YNI+P +EHYGCMVD+ GRAG +++AY
Sbjct: 369 PDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYE 428
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
I +MP P A+I R+ LGAC HG V L + + + L +L+P ++VL +++ +++G
Sbjct: 429 FIIHMPVLPTAIIWRTLLGACSIHGNV-KLAERVKERLSELDPNNSGDHVLLSNIYAVAG 487
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVN 449
W A + ++ + +NK PG S ++V+
Sbjct: 488 KWKDVAAVRRSMTDQRMNKTPGWSMIEVD 516
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 234/428 (54%), Gaps = 3/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + +F+ +P P + LI AY
Sbjct: 547 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP-HPSTVPWTALITAYMDA 605
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ + G+RPD+FT V+ AC R + G +V + G+ ++
Sbjct: 606 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVA 665
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+ A+ VF++M +D V+W +M+ G+ + P +AL +F M+
Sbjct: 666 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 725
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + +SACT L + G + + LGTAL++MY+KCG +A+ V
Sbjct: 726 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 785
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR+K++ W MI GL G A +L +M ++G+K + +F +L +C+H GL+
Sbjct: 786 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 845
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I P +EHYGCMVD+L RAGL++EA+ ++ +MP NAVIL + LG
Sbjct: 846 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 905
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H + L +L+L LEP NYV+ +++ S G W+ AA+L + + KG+ K
Sbjct: 906 GCKIHRNTELAEHVLKQLIL-LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEK 964
Query: 440 VPGCSWVK 447
VP CSWV+
Sbjct: 965 VPACSWVE 972
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 16/286 (5%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T P +K+ R + G +H+ K+ ++ ++ +LL +YA C + A+
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF+EMP V W+++I ++ +A+ V P+S T V +++AC + +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE++ A G+ V + TA V++Y KCG + KA +VF+ MR K+ +W M+ G
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY-----FDEMARV 332
A NG A+ LF M G+KPD + + LSAC+ LG +D G+ +DE
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE---- 758
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
+ P + ++DM + G EA+ + + M + NA+IL
Sbjct: 759 FLDNPVLG--TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMIL 802
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 216/388 (55%), Gaps = 1/388 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
V L ++N + + +F ML+ G P+ +T+ ++ +C + G
Sbjct: 477 VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGR 536
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ I K LD + ++ L+ MYA C ++ A F + VRD+ +W+ +I + +
Sbjct: 537 QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTN 596
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
AL F +M+ PN TL +S C+SL ++ G+ +HS +G D+ +G+
Sbjct: 597 QGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MY+KCG +E+A +F + ++ +W +I G A NG+GN A++ F M+ G+ P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D ++F+ ILSACSH GLV+EGK +F+ M R + I PT++H CMVD+LGR G +E
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ M NA+I + LGA + H L L + L +L+PE ++Y+L +++ + G
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNN-LVLGEKAANKLFELQPEEESSYILLSNIFATEGR 835
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
WD + ++ KG+ K PGCSWV+ N
Sbjct: 836 WDDVKRVRSLMSSKGVKKEPGCSWVEAN 863
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 158/294 (53%), Gaps = 9/294 (3%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N L+ YA+ +KLF M++ ++ + FT V+K C + G +HSLI
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G + +++IG L+ MY+ C A VF+ + D+V WS++I +++K
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+FH M+L + PN T+ SL+SA T+ N++ G+SIH+ G E DVA+ ALV MY
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G V K++ M +++L SW +SGL D G + +++F M++ G P+ +F +
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTME--HYGC--MVDMLGRAGLIEEA 358
IL +CS L V G+ + IK ++ ++ C ++DM + +E+A
Sbjct: 522 ILGSCSCLFDVHYGRQ-----VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ LI + S ESIKLF M P+ +T ++ A + G S+
Sbjct: 378 PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ ++K G ++D + N L+ MY + ++E M RD++SW++ ++G C
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
L +F+ M PN T +S++ +C+ L +V G +H++ + N L+ + + TAL
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY+KC ++E A FN + ++L +WT++I+ A +G A++ F +M Q G+KP+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+ + LS CS L ++ G+ + + ++ M +VDM + G +EEA
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHV-SDMFVGSALVDMYAKCGCMEEA 671
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 146/273 (53%), Gaps = 1/273 (0%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ R + +P + ++ LI+ + +SI LF EM G+ P+ FT +KAC
Sbjct: 165 YARLVLAKMP-DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
C+ + +G +H+ FK+GL D ++G+ L+ +YA C EI++A +F MP ++ V+W+
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
++ G+ + LK+F M + N TL +++ C + N++ G+ IHS +
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G E + +G LV+MYSKCG A VF +++ ++ W+ +I+ L G+ +I LF
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
M P+ + ++LSA ++ G + G++
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 154/284 (54%), Gaps = 4/284 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C +G+ ++H LI K ++ D ++ +L+ +YA C+ A+ V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDVVSW+++I G VA +D++ +F M+ PN TL + + AC+ + + G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+ A GL LD+ +G+ALV++Y+KCG +E A K+F M E+N +W ++++G A G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
+ LF M++ +K + + + +L C++ + +G+ + + E G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG--YEGNEFIG 352
Query: 344 C-MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
C +VDM + GL +A + + + +P+ V+ + + GQ
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQ 395
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 239/400 (59%), Gaps = 11/400 (2%)
Query: 46 LSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYP 105
L SLH R+L + LF L+ YAKT+ I L R D F
Sbjct: 65 LGASLH-ARALRSGFAAAD-LFVRTALVEMYAKTAAG--EIALARAAFDEAPRRDVFLCN 120
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG-NTLLRMYAACKEIDVAKAVFEEMPV 164
++ A + G + G+ + NT++ YA ++ +A+ +F+
Sbjct: 121 VMLAA-----YVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRD 175
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
RD SWSSMI+ + +AL+++ M++A +P+ +++VS++SAC+++ + G +
Sbjct: 176 RDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEV 235
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H + N +E+D+ LGTALV+MY+KCG +E + KVF+ M K++ +W+ MI GLA++G G
Sbjct: 236 HRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLG 295
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
+ A+SLF++MI GL+P+ I+F +L AC+H+GLV++GK YF M+ V+ + P MEHYGC
Sbjct: 296 HDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGC 355
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
MVD+LGRAG +EEA +IR+M +P+ +I R+ LGACR H V ++ + KL + L+P
Sbjct: 356 MVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKV-LDPL 414
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+YVL +++ + + +W+ AE+ I ++ + +VPG S
Sbjct: 415 ADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRS 454
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 234/428 (54%), Gaps = 3/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK N +++ + L + LH + +F+ +P P + LI AY
Sbjct: 571 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP-HPSTVPWTALITAYMDA 629
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ + G+RPD+FT V+ AC R + G +V + G+ ++
Sbjct: 630 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVA 689
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +Y C E+ A+ VF++M +D V+W +M+ G+ + P +AL +F M+
Sbjct: 690 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 749
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + +SACT L + G + + LGTAL++MY+KCG +A+ V
Sbjct: 750 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 809
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F MR+K++ W MI GL G A +L +M ++G+K + +F +L +C+H GL+
Sbjct: 810 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 869
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+G+ YF M ++Y+I P +EHYGCMVD+L RAGL++EA+ ++ +MP NAVIL + LG
Sbjct: 870 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 929
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
C+ H + L +L+L LEP NYV+ +++ S G W+ AA+L + + KG+ K
Sbjct: 930 GCKIHRNTELAEHVLKQLIL-LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEK 988
Query: 440 VPGCSWVK 447
VP CSWV+
Sbjct: 989 VPACSWVE 996
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 16/286 (5%)
Query: 99 PDNFTYPFVVKACGRCL-LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P + T P +K+ R + G +H+ K+ ++ ++ +LL +YA C + A+
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF+EMP V W+++I ++ +A+ V P+S T V +++AC + +
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE++ A G+ V + TA V++Y KCG + KA +VF+ MR K+ +W M+ G
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY-----FDEMARV 332
A NG A+ LF M G+KPD + + LSAC+ LG +D G+ +DE
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE---- 782
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP----NAVIL 374
+ P + ++DM + G EA+ + + M + NA+IL
Sbjct: 783 FLDNPVLG--TALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMIL 826
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 216/388 (55%), Gaps = 1/388 (0%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
V L ++N + + +F ML+ G P+ +T+ ++ +C + G
Sbjct: 477 VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGR 536
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ I K LD + ++ L+ MYA C ++ A F + VRD+ +W+ +I + +
Sbjct: 537 QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTN 596
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
AL F +M+ PN TL +S C+SL ++ G+ +HS +G D+ +G+
Sbjct: 597 QGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MY+KCG +E+A +F + ++ +W +I G A NG+GN A++ F M+ G+ P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D ++F+ ILSACSH GLV+EGK +F+ M R + I PT++H CMVD+LGR G +E
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ M NA+I + LGA + H L L + L +L+PE ++Y+L +++ + G
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNN-LVLGEKAANKLFELQPEEESSYILLSNIFATEGR 835
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
WD + ++ KG+ K PGCSWV+ N
Sbjct: 836 WDDVKRVRSLMSSKGVKKEPGCSWVEAN 863
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 158/294 (53%), Gaps = 9/294 (3%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N L+ YA+ +KLF M++ ++ + FT V+K C + G +HSLI
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G + +++IG L+ MY+ C A VF+ + D+V WS++I +++K
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+FH M+L + PN T+ SL+SA T+ N++ G+SIH+ G E DVA+ ALV MY
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G V K++ M +++L SW +SGL D G + +++F M++ G P+ +F +
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTME--HYGC--MVDMLGRAGLIEEA 358
IL +CS L V G+ + IK ++ ++ C ++DM + +E+A
Sbjct: 522 ILGSCSCLFDVHYGRQ-----VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++ LI + S ESIKLF M P+ +T ++ A + G S+
Sbjct: 378 PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ ++K G ++D + N L+ MY + ++E M RD++SW++ ++G C
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
L +F+ M PN T +S++ +C+ L +V G +H++ + N L+ + + TAL
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY+KC ++E A FN + ++L +WT++I+ A +G A++ F +M Q G+KP+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
+ + LS CS L ++ G+ + + ++ M +VDM + G +EEA
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD-MFVGSALVDMYAKCGCMEEA 671
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 146/273 (53%), Gaps = 1/273 (0%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ R + +P + ++ LI+ + +SI LF EM G+ P+ FT +KAC
Sbjct: 165 YARLVLAKMP-DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
C+ + +G +H+ FK+GL D ++G+ L+ +YA C EI++A +F MP ++ V+W+
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
++ G+ + LK+F M + N TL +++ C + N++ G+ IHS +
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G E + +G LV+MYSKCG A VF +++ ++ W+ +I+ L G+ +I LF
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
M P+ + ++LSA ++ G + G++
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 154/284 (54%), Gaps = 4/284 (1%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +++ C +G+ ++H LI K ++ D ++ +L+ +YA C+ A+ V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDVVSW+++I G VA +D++ +F M+ PN TL + + AC+ + + G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+ A GL LD+ +G+ALV++Y+KCG +E A K+F M E+N +W ++++G A G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
+ LF M++ +K + + + +L C++ + +G+ + + E G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG--YEGNEFIG 352
Query: 344 C-MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
C +VDM + GL +A + + + +P+ V+ + + GQ
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQ 395
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 246/441 (55%), Gaps = 10/441 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
+ ++H K L+ N + S + T L + +F LP + +N +I Y
Sbjct: 93 VRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELP-ERDVVLWNAMINGYT 151
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
K +++ +F M + G+ FT ++ I G ++H ++ K+G S
Sbjct: 152 KIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVA 211
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N L+ MY CK + A +FE + +D+ SW+S+I+ CD L++F +M +
Sbjct: 212 VSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSR 271
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-----DVALGTALVEMYSKCGH 252
P+ +T+ +++ AC+ L + G IH Y +VNGL DV L A+++MY+KCG
Sbjct: 272 VLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGC 331
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++ A +F+LMR K++ SW IMI G A +G G A+ +F +M + +KPD ++F +LSA
Sbjct: 332 MKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSA 391
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH G V +G+++ M + + PT+EHY C++DMLGRAG + EAY + + +P E N +
Sbjct: 392 CSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLI 451
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL--GANYVLAASVSSLSGNWDTAAELMV 430
+ + LGACR HG L + +G+ + +LEP+ +Y+L +S+ + G ++ A E+
Sbjct: 452 LWMALLGACRLHGNA-ELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRR 510
Query: 431 AINQKGLNKVPGCSWVKVNDG 451
+ ++ + K PGCSW+++ DG
Sbjct: 511 TMKEQNVKKTPGCSWIELKDG 531
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+FAYN +I + + + + + M G+ PD FT+P VV+AC C + + +H
Sbjct: 42 VFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRAC--CEFMEV-RKIHG 98
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+FK+GL+ + ++G+ L+ Y + A+ VFEE+P RDVV W++MI G+ +
Sbjct: 99 CLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNK 158
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ VF RM S + T S++S TS+ ++ G +IH G VA+ AL++
Sbjct: 159 AVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALID 218
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KC H E A +F ++ EK+L SW +IS + + LF KM+ + + PD I+
Sbjct: 219 MYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVIT 278
Query: 306 FSAILSACSHLGLVDEGK 323
+A+L ACSHL + G+
Sbjct: 279 ITAVLPACSHLAALMHGR 296
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 24/268 (8%)
Query: 141 TLLRMYAACKEIDVAKAVFEE-MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+L+ MY+ C +++ A VF + R+V +++++IAGFVA +D + + RM+
Sbjct: 15 SLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVM 74
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T +V AC + VR IH GLEL+V +G+ALV Y K E A KV
Sbjct: 75 PDKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKV 131
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + E+++ W MI+G G N A+ +F +M + G+ + ++ILS + +G +
Sbjct: 132 FEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDI 191
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGC------MVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+ G+ ++ I M + C ++DM G+ E+A +I M E +
Sbjct: 192 NNGR-------AIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDAL-MIFEMINEKDLFS 243
Query: 374 LRSFLGA---CRNHGQVLYLDDNLGKLL 398
S + A C +H L L GK+L
Sbjct: 244 WNSIISAHEQCDDHDGTLRL---FGKML 268
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 241 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
T+L+ MYS+C +E+A VF + E+N+ ++ +I+G NG + +M G+
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 300 KPDSISFSAILSAC 313
PD +F ++ AC
Sbjct: 74 MPDKFTFPCVVRAC 87
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 259/481 (53%), Gaps = 45/481 (9%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLF 67
LI SK+ HHL Q+H L+ L H+ + + + S+ LH + +LF+ P P +F
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTP-NPNVF 87
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+ +I A+A ++ + +ML ++P+ FT ++KAC + +VHS
Sbjct: 88 LWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHA 143
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR---------------------- 165
K GL S Y+ L+ YA ++ A+ +F+ MP R
Sbjct: 144 IKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEAR 203
Query: 166 ---------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANES-------PNSVTLVSLV 209
DVV W+ MI G+ P++AL F +M + PN +T+V+++
Sbjct: 204 VLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVL 263
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S+C + + G+ +HSY NG++++V +GTALV+MY KCG +E A KVF++M K++
Sbjct: 264 SSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVV 323
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
+W MI G +G + A+ LF +M G+KP I+F A+L+AC+H GLV +G FD M
Sbjct: 324 AWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSM 383
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
Y ++P +EHYGCMV++LGRAG ++EAY ++R+M EP+ V+ + L ACR H V
Sbjct: 384 KDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNV-S 442
Query: 390 LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L + + ++L+ YVL +++ + + NW A++ + G+ K PGCS ++V
Sbjct: 443 LGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVK 502
Query: 450 D 450
+
Sbjct: 503 N 503
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 224/384 (58%), Gaps = 2/384 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ ++I A+ + E+I LFDEM GLRPD + VV AC + G VH+
Sbjct: 325 IVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHN 384
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K + S+ + N L+ MYA C ++ A +F ++PV+++VSW++MI G+ P++
Sbjct: 385 HIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNE 444
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F M+ P+ VT+ ++ AC L + G IH + + G D+ + ALV+
Sbjct: 445 ALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVD 503
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KCG + A ++F+++ +K++ WT+MI+G +G G AIS F KM G++P+ S
Sbjct: 504 MYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESS 563
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F++IL AC+H GL+ EG FD M NI+P +EHY CMVD+L R+G + AY I M
Sbjct: 564 FTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETM 623
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P+A I + L CR H V L + + + + +LEPE YVL A+V + + W+
Sbjct: 624 PIKPDAAIWGALLSGCRIHHDV-ELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEV 682
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
++ I++ GL GCSW++V
Sbjct: 683 KKIQRRISKGGLKNDQGCSWIEVQ 706
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 7/362 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + + +F +N L+ YAK ES+ LF++M + G+R D++T+ V+K
Sbjct: 112 RRIFDGI-LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAA 170
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ VH + K+G S + N+L+ Y C E++ A+ +F+E+ RDVVSW+SM
Sbjct: 171 SAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSM 230
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G + L+ F +M +S TLV+++ AC ++ N+ G ++H+Y V G
Sbjct: 231 ISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGF 290
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
V L++MYSKCG++ A +VF M E + SWT +I+ G AI LF +
Sbjct: 291 SGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDE 350
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M GL+PD + ++++ AC+ +D+G+ + + + N+ + +++M + G
Sbjct: 351 MQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCG 409
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEA I +P + N V + +G + L + +L L ++ +L + V A
Sbjct: 410 SMEEANLIFSQLPVK-NIVSWNTMIGGYSQNS----LPNEALQLFLDMQKQLKPDDVTMA 464
Query: 414 SV 415
V
Sbjct: 465 CV 466
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 133/280 (47%), Gaps = 7/280 (2%)
Query: 44 TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT 103
+S+ +S + + NN+ V N I + + ++KL ++ L + T
Sbjct: 7 SSVGVSATLSETTHNNVTVDK-----NAKICKFCEMGDLRNAMKLLSRSQRSELELN--T 59
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y V++ C + G VHS+I G+ D+ +G L+ MY C ++ + +F+ +
Sbjct: 60 YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ W+ +++ + + +++ +F +M+ +S T ++ + VR +
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H Y + G A+ +L+ Y KCG VE A +F+ + ++++ SW MISG NG
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+ F +M+ G+ DS + +L AC+++G + G+
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGR 279
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 261/466 (56%), Gaps = 21/466 (4%)
Query: 4 RHIETLIQL---SKTVHHLHQLHTLFLKTS---LDHNTCIISRFILTSLS------ISLH 51
RH L++L S +V Q+H L+ + L H ++++ +L L+ L
Sbjct: 16 RHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHP--LLAKHLLFHLASLRAGPPPLL 73
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ ++ + L P F+ NT++R A ++ ++ L L PD TYP +++AC
Sbjct: 74 YAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALHRRRLAP---PDTHTYPPLLQAC 130
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RDVVS 169
R L + G S+H+ K GL + ++ N+L+ Y AC + A VF+E+PV R++VS
Sbjct: 131 TRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVS 190
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+S++ GF A P++ L +F A+ P+ T+VS+++AC + + G +H +A
Sbjct: 191 WNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFAS 250
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAI 288
GL + +G AL+++Y+KCG VE A+KVF M + + SWT +I GLA NG G A+
Sbjct: 251 KVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDAL 310
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF M + L P I+ +L ACSH GLVD+G YF+EM Y I P +EH GCMVD+
Sbjct: 311 ELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDL 370
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG +EEA++ I MP EPNAV+ R+ LGAC H + L L + L++L+P +
Sbjct: 371 LGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKK-LELGEAAWARLVELDPGHSGD 429
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
YVL +++ + G W A L + G+ K PG S V++ + E
Sbjct: 430 YVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYE 475
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 240/431 (55%), Gaps = 4/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +K D N + + I + + + + F+ L L ++ T YA+
Sbjct: 282 EIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFD-LMAHKDLISWTTAAAGYAQN 340
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C +++++L ++ G+ D ++ AC +G +H + GL SD +
Sbjct: 341 KCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQ 399
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT++ +Y C ID A +FE + +DVVSW+SMI+ +V + AL+VF MK
Sbjct: 400 NTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLE 459
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VTLVS++SA SL ++ G+ IH + + G L+ ++ LV+MY++CG VE A+K+
Sbjct: 460 PDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKI 519
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + +NL WT MIS +G G A+ LF +M + PD I+F A+L ACSH GLV
Sbjct: 520 FTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLV 579
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EGK++ + M Y ++P EHY C+VD+LGR +EEAY I+++M EP + + LG
Sbjct: 580 NEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLG 639
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H + + + LL+L+ + NYVL ++V + +G W E+ + + GL K
Sbjct: 640 ACRIHSNK-EIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTK 698
Query: 440 VPGCSWVKVND 450
PGCSW++V +
Sbjct: 699 NPGCSWIEVGN 709
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 185/349 (53%), Gaps = 3/349 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L +K D +++ + L + ++ R LF+ + V + ++N++I AY+
Sbjct: 79 EIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGN 138
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ LF EMLK G+ + +T+ ++AC I +G +H+ I K G D Y+
Sbjct: 139 GMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVA 198
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MY ++ A +F + +D+V+W+SM+ GF+ S+AL+ F+ ++ A+
Sbjct: 199 NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLK 258
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ V+++S++ A L + G+ IH+YA+ NG + ++ +G L++MY+KC + +
Sbjct: 259 PDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRA 318
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+LM K+L SWT +G A N A+ L ++ G+ D+ +IL AC L +
Sbjct: 319 FDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCL 378
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ K R P +++ ++D+ G G+I+ A I ++ +
Sbjct: 379 GKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFESIECK 425
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 9/296 (3%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +N ++ Y ++ +++++ EM G+ D++T+P ++KACG + G +H
Sbjct: 23 IFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHG 82
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPS 184
L K G DS ++ N+L+ +YA C +I+ A+ +F+ M VR DVVSW+S+I+ + +
Sbjct: 83 LAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCT 142
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL +F M A N+ T + + AC ++ G IH+ + +G LDV + ALV
Sbjct: 143 EALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALV 202
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY + G + +A +F + K++ +W M++G NG + A+ F + LKPD +
Sbjct: 203 AMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQV 262
Query: 305 SFSAILSACSHLGLVDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
S +I+ A LG + G KN FD V N M C + GRA
Sbjct: 263 SIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRA 318
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MY C + A+ +F++M R + +W++M+ G+V+ AL+++ M+ S +S T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L+ AC + ++ G IH A+ G + V + +LV +Y+KC + A K+F+ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 265 EKN-LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+N + SW +IS + NG A+ LF++M++ G+ ++ +F+A L AC + G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 246/435 (56%), Gaps = 15/435 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF-------TRSLFNNLPVTPPL-FAYNTL 72
QLH KT C++ F+ TSL IS++ R LF+ P + L YN+L
Sbjct: 31 QLHCHVFKTG-----CLLEPFVQTSL-ISMYGKCSLIDNARKLFDENPQSRKLTVCYNSL 84
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+ YA S + + LF EM + G+ + T +V+ CG +G+G VH K GL
Sbjct: 85 LSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGL 144
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
D D +GN LL MY EID + +F+EMP + +++W++MI G+ ++ L+++
Sbjct: 145 DMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKE 204
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ P+ +TLV ++S+C L + G+ + G + L ALV MY++CG+
Sbjct: 205 MESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGN 264
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++KA +F+ M K++ SWT +I G +G+G A+ LF +MI+ G+KPD +F ++LSA
Sbjct: 265 LKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSA 324
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH GL ++G +YF M R Y ++P EHY CMVD+LGRAG + EA +I +M +
Sbjct: 325 CSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGA 384
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ + LGAC+ H V L + + +++LEP YVL ++V + +GN + + + +
Sbjct: 385 LWGALLGACKIHRNV-ELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLM 443
Query: 433 NQKGLNKVPGCSWVK 447
++ L K PGCS+V+
Sbjct: 444 RKRKLKKDPGCSYVE 458
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML++G P+ FT+PF +K+C L G +H +FK G + ++ +L+ MY C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 152 IDVAKAVFEEMPV--RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
ID A+ +F+E P + V ++S+++G+ D + +F M+ N VT++ LV
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
C N+ G +H + V GL++D ++G L+ MY K G ++ K+F+ M K L
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
+W MI+G A NG N + L+ +M G PD ++ +LS+C+HLG + GK +M
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 330 ARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
++ P + + +V+M R G +++A I MP + + V + +G HGQ
Sbjct: 241 EGFGFSSNPFLNN--ALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAIIGGYGMHGQ 295
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 218/386 (56%), Gaps = 9/386 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T++ + +E++ +F M G+ D +T+ ++ ACG + G +H+ I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + + ++G+ L+ MY+ C+ I +A+AVF M R+++SW++MI G+ +A++
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M++ P+ TL S++S+C +L ++ G H A+V+GL + + ALV +Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M + SWT +++G A G+ I LF KM+ GLKPD ++F
Sbjct: 426 KCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACS GLV++G +YFD M + + I P +HY CM+D+ R+G +EA I+ MP
Sbjct: 486 VLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDT 424
P+A + L +CR G + +GK LL+ +P+ A+YVL S+ + G W
Sbjct: 546 PDAFGWATLLSSCRLRGNM-----EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTE 600
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
A L + + + K PGCSW+K +
Sbjct: 601 VAHLRRGMRDRQVKKEPGCSWIKYKN 626
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 34/342 (9%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRC 114
LF ++P + +YN LI ++ T S++L+ +L+ +RP T ++
Sbjct: 101 LFASMPERDAV-SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------- 148
+G SVH + ++G + ++G+ L+ MYA
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 149 -----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
CK I+ AK +F+ M RD ++W++M+ G +AL VF RM+ +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T S+++AC +L + G+ IH+Y E +V +G+ALV+MYSKC + A VF M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+N+ SWT MI G N A+ F++M G+KPD + +++S+C++L ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +A V + + +V + G+ G IE+A+ + M
Sbjct: 400 Q-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +T + N + S + + S S+ ++F + + ++ +I Y +
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN-IISWTAMIVGYGQN 357
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+CS E+++ F EM G++PD+FT V+ +C + G H L GL +
Sbjct: 358 ACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C I+ A +F+EM D VSW++++ G+ + + +F +M
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLK 477
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VT + ++SAC S+ G VEK
Sbjct: 478 PDGVTFIGVLSAC-----------------------------------SRAGLVEKGCDY 502
Query: 260 FNLMREKN-----LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
F+ M++ + +T MI + +GR A +M + PD+ ++ +LS+C
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCR 559
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
G ++ GK + + P Y + M G E H+ R M
Sbjct: 560 LRGNMEIGKWAAENLLETDPQNPA--SYVLLCSMHAAKGQWTEVAHLRRGM 608
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 74/335 (22%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
PP F N L+ AYAK+ + ++FDEM P
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEM------------P------------------ 75
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
D + + N LL A + + + +F MP RD VS++++I GF + SP
Sbjct: 76 ---------DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSP 126
Query: 184 SDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ +++++ R L ES P +TL +++ ++L + G S+H + G +G+
Sbjct: 127 ARSVQLY-RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGS 185
Query: 242 ALVEMYSK-------------------------------CGHVEKAFKVFNLMREKNLQS 270
LV+MY+K C +E A +F LM +++ +
Sbjct: 186 PLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSIT 245
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT M++GL NG A+ +F +M G+ D +F +IL+AC L ++EGK +
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R + + + +VDM + I A + R M
Sbjct: 306 RTW-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 231/395 (58%), Gaps = 3/395 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT-YPFVVKACGRC 114
+F+ +PV + ++ LI + E+ LF +ML GL + T ++ C
Sbjct: 262 VFHGMPVRNDV-TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASL 320
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G +H+LI K G+ +D N+LL MYA I+ A F+E+ V+D +S+ +++
Sbjct: 321 ADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALL 380
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G V +A VF +M+ N P+ T+VSL+ AC+ L ++ G+ H ++ GL
Sbjct: 381 SGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLA 440
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
L+ ++ +L++MY+KCG ++ + +VF+ M +++ SW MI+G +G G A +LF M
Sbjct: 441 LETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGM 500
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G PD ++F +++ACSH GLV EGK++FD M Y I P MEHY CMVD+L R GL
Sbjct: 501 KNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGL 560
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
++EAY I++MP + + + + LGACR H + L + +++ KL PE N+VL ++
Sbjct: 561 LDEAYQFIQSMPLKADVRVWGALLGACRIHKNI-DLGKQVSRIIQKLGPEGTGNFVLLSN 619
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ S +G +D AAE+ + KG K PG SW+++N
Sbjct: 620 IFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 53/378 (14%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L R +F+ +P P AYN LIRAY+ +I L+ ML+ + P+ +T+PFV+
Sbjct: 49 QLALARQVFDRIP-APDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + + G ++H+ GL +D ++ L+ +Y C A+ VF +MP+RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIH 225
+W++M+AG+ A + H + + + PN+ TLVSL+ + G SIH
Sbjct: 168 AWNAMLAGYANHGMYHHA--IAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 226 SYAVVNGLELD---VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+Y + LE + V +GTAL++MY+KC + A +VF+ M +N +W+ +I G
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285
Query: 283 RGNYAISLFAKMI------------------------------------QTGLKPDSISF 306
R A +LF M+ ++G+ D +
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LS + GL++E +FDE+A +K T+ YG ++ + G EEA+ + + M
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIA----VKDTIS-YGALLSGCVQNGKAEEAFLVFKKMQ 400
Query: 367 T---EPNAVILRSFLGAC 381
EP+ + S + AC
Sbjct: 401 ACNMEPDIATMVSLIPAC 418
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 14/254 (5%)
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
DK L + + ++ +A+ VF+ +P D +++++I + A+ ++ M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+PN T ++ AC++L+++RAG +IH++A GL D+ + TAL+++Y +C
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSAC 313
A VF M +++ +W M++G A++G ++AI+ M GL+P++ + ++L
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHY-------GCMVDMLGRAGLIEEAYHIIRNMP 366
+ G + +G + Y ++ +E ++DM + + A + MP
Sbjct: 213 AQHGALFQGTSI-----HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMP 267
Query: 367 TEPNAVILRSFLGA 380
N V + +G
Sbjct: 268 VR-NDVTWSALIGG 280
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 241/409 (58%), Gaps = 11/409 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDN------ 101
L R+LF+ + + ++ ++I Y + + ++ LF E L ++G D
Sbjct: 203 LRDARTLFDEIS-HRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP 261
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
V+ AC R I VH + K G + D + NTL+ YA C E+ V++ VF+
Sbjct: 262 IAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDG 321
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRA 220
M RDV+SW+S+IA + ++++++FHRM E + N+VTL +++ AC + R
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IH + GLE +V +GT++++MY KCG VE A K F+ MREKN++SW+ M++G
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 441
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G A+ +F +M G+KP+ I+F ++L+ACSH GL++EG ++F M+ ++++P +E
Sbjct: 442 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE 501
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGCMVD+LGRAG ++EA+ +I+ M P+ V+ + LGACR H V L + + L +
Sbjct: 502 HYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNV-DLGEISARKLFE 560
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L+P+ YVL +++ + +G W+ + + + GL K PG S V +
Sbjct: 561 LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIK 609
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 173/321 (53%), Gaps = 12/321 (3%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LFN +F++N++I A++ S+E+++ F M K L+P+ T+P +K+C
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L + G H G + D ++ + L+ MY+ C E+ A+ +F+E+ R++VSW+SMI
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 175 AGFVACDSPSDALKVFHRMKLANESP---------NSVTLVSLVSACTSLINVRAGESIH 225
G+V D AL +F L ES + + +VS++SAC+ + E +H
Sbjct: 226 TGYVQNDDAHRALLLFKEF-LVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+ + G E D+ + L++ Y+KCG + + +VF+ M E+++ SW +I+ A NG
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344
Query: 286 YAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
++ +F +M++ G + ++++ SA+L AC+H G GK D++ ++ ++ +
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTS 403
Query: 345 MVDMLGRAGLIEEAYHIIRNM 365
++DM + G +E A M
Sbjct: 404 IIDMYCKCGKVEMARKAFDRM 424
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 241/440 (54%), Gaps = 39/440 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNL-PVTPPLFAYNTLIRAY 76
L Q+H +KT+ + ++R ++ + + S H+ + +F + P F +N+ ++A
Sbjct: 77 LRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKAL 136
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
A+ I++I LF + + + PD FT V++AC L + G +H ++ KVG S
Sbjct: 137 AEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS-- 194
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
W+SMIAG+V C +A+ +F +M+ A
Sbjct: 195 ---------------------------------WTSMIAGYVQCGKAKEAIHLFAKMEEA 221
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N VT+V++++AC L + G IH Y+ +G + +V + L++MY KCG +E+A
Sbjct: 222 GVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEA 281
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
KVF M E+ + SW+ MI GLA +GR A+ LF+ M Q G++P+ ++F +L ACSH+
Sbjct: 282 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 341
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ EG+ +F M R Y I P +EHYGCMVD+L RAGL+ EA+ I NMP +PN V+ +
Sbjct: 342 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 401
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H V ++ + K LL+L+P YV+ +++ + +G W+ A + + +
Sbjct: 402 LLGACRVHKNVEMAEEAI-KHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQ 460
Query: 437 LNKVPGCSWVKVNDGSAEEM 456
+ K PG S + V DG E
Sbjct: 461 VKKTPGWSSITV-DGVVHEF 479
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 229/432 (53%), Gaps = 34/432 (7%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + LF +PV ++ +I + + S E+++L E+ ++G P + ++ +
Sbjct: 505 LKEAKDLFQKMPVKNSA-SWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALS 563
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI----------------- 152
AC + IG +HSL K G + Y+ N L+ MYA C +
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS 623
Query: 153 --------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
D A+ VFE+MP RDVVSW+++I+ +V AL +F M
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN +T+ SL+SAC +L ++ GE H+ G + + +G +L+ MY KCG+ E F
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFC 742
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M E +L +W ++ G A NG G AI +F +M G+ PD +SF +L ACSH GL
Sbjct: 743 VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGL 802
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VDEG +F+ M + Y I P + HY CMVD+LGRAG + EA +I NMP +P++VI + L
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
GACR H V L + + L ++ A YVL +++ + G WD AE+ + +GL
Sbjct: 863 GACRIHRNV-ELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLT 921
Query: 439 KVPGCSWVKVND 450
K PG SW++V +
Sbjct: 922 KEPGISWIQVKN 933
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 188/417 (45%), Gaps = 79/417 (18%)
Query: 45 SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTY 104
SL +++HF F +P +++ T+I A+A+ ++I+L++ +
Sbjct: 411 SLDLAMHF----FETMPERNE-YSWTTMIAAFAQCGRLDDAIQLYERV------------ 453
Query: 105 PFVVKACGRCLLIGIG--GSVHS--LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
P A ++ G + LIF L+ + N ++ Y + AK +F+
Sbjct: 454 PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQ 513
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
+MPV++ SW++MIAGFV + +AL++ + + P+ + S +SAC ++ +V
Sbjct: 514 KMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEI 573
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IHS A+ G + + + L+ MY+KCG+VE VF +R K+ SW +ISGL++
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSE 633
Query: 281 N-------------------------------GRGNYAISLFAKMIQTGLKPDSISFSAI 309
N G G A+ LF M+ G+KP+ ++ +++
Sbjct: 634 NYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSL 693
Query: 310 LSACSHLGLVDEGKNY--------FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
LSAC +LG + G+ + FD V N TM ++ C E+ + +
Sbjct: 694 LSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITM-YFKCGY---------EDGFCV 743
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
MP E + + + L C +G LGK +K+ ++ +L +S L
Sbjct: 744 FEEMP-EHDLITWNAVLVGCAQNG--------LGKEAIKIFEQMEVEGILPDQMSFL 791
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +P + ++ +I Y S E+ +F +M +T RPD + V+ A
Sbjct: 315 RELFDQMPERNSV-SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITG 373
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + GS+ + K G + D +G+ +L Y +D+A FE MP R+ SW++M
Sbjct: 374 LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA F C DA++++ R+ T ++++A + ++ I L
Sbjct: 434 IAAFAQCGRLDDAIQLYERVP----EQTVATKTAMMTAYAQVGRIQKARLIFDEI----L 485
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+V A++ Y++ G +++A +F M KN SW MI+G N A+ L +
Sbjct: 486 NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIE 545
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ ++G P SF++ LSAC+++G V+ G+ +A + ++ M + G
Sbjct: 546 LHRSGSVPSDSSFTSALSACANIGDVEIGR-VIHSLAIKTGCQFNSYVMNGLISMYAKCG 604
Query: 354 LIEEAYHIIRNM 365
+E+ H+ R +
Sbjct: 605 NVEDGSHVFRTI 616
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 123/232 (53%), Gaps = 9/232 (3%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+++ Y C + A+ +F++MP R+ VSW MI+G+V +A VF +M
Sbjct: 299 NSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ V ++SA T L ++ S+ A+ G E DV +G+A++ Y++ G ++ A
Sbjct: 359 PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M E+N SWT MI+ A GR + AI L+ ++ + + +A+++A + +G +
Sbjct: 419 FETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATK----TAMMTAYAQVGRI 474
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+ + FDE+ + P + + ++ + G+++EA + + MP + +A
Sbjct: 475 QKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSA 521
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 51/354 (14%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
H T+ +K ++ N+ I S + L R +F +P + ++ +I AY +
Sbjct: 611 HVFRTIRVKDTVSWNSLISG----LSENYMLDDARVVFEKMP-KRDVVSWTAIISAYVQA 665
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ LF +ML G++P+ T ++ ACG I +G H+LIFK+G D+ ++G
Sbjct: 666 GHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVG 725
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ MY C D VFEEMP D+++W++++ G +A+K+F +M++
Sbjct: 726 NSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGIL 784
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ ++ + ++ AC S G V++ +
Sbjct: 785 PDQMSFLGVLCAC-----------------------------------SHAGLVDEGWAH 809
Query: 260 FNLMREKN-----LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
FN M +K + +T M+ L GR Y A + +KPDS+ + A+L AC
Sbjct: 810 FNSMTQKYGIMPLVYHYTCMVDLL---GRAGYLSEAEALIENMPVKPDSVIWEALLGACR 866
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
V+ G+ + + ++ KP Y + ++ G+ ++ I + M +
Sbjct: 867 IHRNVELGQRVAERLFQM--TKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQ 918
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 43/190 (22%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT ++ ++ A+ VF EM RDVVSW+SMI G+ +A +F
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF--------- 225
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ G++I ++ T L+ Y+K G +E+A +V
Sbjct: 226 -----------------DAFVGKNIRTW-------------TILLTGYAKEGRIEEAREV 255
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M E+N+ SW MISG NG A LF +M + + S++++++ H +
Sbjct: 256 FESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA----SWNSVVTGYCHCYRM 311
Query: 320 DEGKNYFDEM 329
E + FD+M
Sbjct: 312 SEARELFDQM 321
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++ + G VE+A +VFN M ++++ SW MI+G + NG+ + A LF + ++
Sbjct: 178 IQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR--- 234
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+++ +L+ + G ++E + F+ M + + + M+ + G ++ A +
Sbjct: 235 -TWTILLTGYAKEGRIEEAREVFESMT-----ERNVVSWNAMISGYVQNGDLKNARKLFD 288
Query: 364 NMPTE 368
MP +
Sbjct: 289 EMPEK 293
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 223/383 (58%), Gaps = 1/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NTLI A+ E++ + EM + G PD FT V+ C I G VH
Sbjct: 137 SWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYA 196
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G D+D ++G++L+ MYA C ++D + VF+ D V W+SM+AG+ S +AL
Sbjct: 197 IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL 256
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F RM A P VT SL+ A +L +R G+ +H+Y + ++ + ++L++MY
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY 316
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG+V+ A +VFN ++ ++ SWT MI G A +G A LF +M +KP+ I+F
Sbjct: 317 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFL 376
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
A+L+ACSH GLVD G YF+ M+ Y P++EH + D LGRAG ++EAY+ I M
Sbjct: 377 AVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKI 436
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P + + + L ACR H + L + + K + +LEP+ ++V+ +++ S SG W+ AA+
Sbjct: 437 KPTSSVWSTLLRACRVHKNTV-LAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQ 495
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
L ++ KG+ K P CSW++V +
Sbjct: 496 LRKSMRIKGMKKEPACSWIEVKN 518
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSA---CTSLINVRAGESIHSYAVVNGLELDVALGTA 242
A+ +F +M+ A+ +P S SL +A C L S+H+ A+ +G D A
Sbjct: 31 AISLFLQMR-ASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 89
Query: 243 LVEMYSKCGHVEKAF--------------------KVFNLMREKNLQSWTIMISGLADNG 282
L+ + K F KVF+ M E++ SW +I G A++
Sbjct: 90 LLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHK 149
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAIL---SACSHL--GLVDEG---KNYFD 327
R A+S+ +M + G PD+ + S +L + C+ + G+V G KN FD
Sbjct: 150 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD 202
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPL 66
+L++L K QLH ++ + N I S I + ++ R +FN + +P +
Sbjct: 285 SLLRLGK------QLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ-SPDI 337
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++ +I YA + E+ LF+ M ++P++ T+ V+ AC L+ G +
Sbjct: 338 VSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNS 397
Query: 127 I-----FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS-WSSMI 174
+ F L+ + +TL R ++D A EM ++ S WS+++
Sbjct: 398 MSNQYGFVPSLEHCAALADTLGR----AGDLDEAYNFISEMKIKPTSSVWSTLL 447
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 218/381 (57%), Gaps = 2/381 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N+LI Y ++ E ++ F +M+K +PD+ T+ ++ + I G +H +
Sbjct: 391 WNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +++ IGN+LL +YA C E+D VF M D++SW+++IA V D + +
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ + M+ P+ T++ ++ C+ L R G+ IH Y +G E +V +G AL+EMYS
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E KVF M+EK++ +WT +IS G G A+ F M +G+ PDS++F A
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ ACSH G+V EG +FD M YN++P MEHY C+VD+L R+GL+ +A I +MP +
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A + + L ACR G + + K +L+L + YVL +++ + G WD +
Sbjct: 690 PDASLWGALLSACRARGNT-NIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTV 748
Query: 429 MVAINQKGLNKVPGCSWVKVN 449
++ KGL K PG SW+++
Sbjct: 749 RNSMKTKGLKKEPGSSWIEIQ 769
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 174/315 (55%), Gaps = 8/315 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTC----IISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
+K L +H+L + + L + +IS++ IS + S+F ++ T ++
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS---SVSVFRSISPTNNVYL 88
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++IRA +++ + EM + L+PD FT+P V+ +C R L + +G VH
Sbjct: 89 WNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAM 148
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
++G +SD YIGN L+ MY+ ++D A+ VFEEM RD VSW+S+I+G+ + DAL
Sbjct: 149 EMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALD 208
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++H+ ++ P+ T+ S++ AC SL+ V+ G ++H G+ DV +G L+ MY
Sbjct: 209 MYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYF 268
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K + +A +VF+ M K+ +W MI G A GR ++ LF MI G PD +S ++
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITS 327
Query: 309 ILSACSHLGLVDEGK 323
+ AC G + GK
Sbjct: 328 TIRACGQSGDLQVGK 342
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 13/367 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ + V + +NT+I YA+ S+KLF +M+ G PD + ++
Sbjct: 273 LREARRVFSKMAVKDSV-TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIR 330
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG+ + +G VH + G + D N L+ MYA C ++ A+ VF+ +D V+
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+S+I G+ + L+ F MK+ + P+SVT V L+S + L ++ G IH +
Sbjct: 391 WNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G E ++ +G +L+++Y+KCG ++ KVF+ M ++ SW +I+
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
+ +M GL PD + IL CS L + +GK + + + + +++M
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMY 568
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
+ G +E + + M E + V + + A +G+ GK LK ++ +
Sbjct: 569 SKCGSLENCIKVFKYM-KEKDVVTWTALISAFGMYGE--------GKKALKAFQDMELSG 619
Query: 410 VLAASVS 416
VL SV+
Sbjct: 620 VLPDSVA 626
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 33/252 (13%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I + ++ +EM GL PD T ++ C + G +H
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
IFK G +S+ IGN L+ MY+ C ++ VF+ M +DVV+W+++I+ F
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKK 607
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
ALK F M+L+ P+SV ++ + AC+ HS V GL + T
Sbjct: 608 ALKAFQDMELSGVLPDSVAFIAFIFACS-----------HSGMVKEGLRFFDRMKTD--- 653
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+NL E ++ + ++ LA +G A M +KPD+
Sbjct: 654 --------------YNL--EPRMEHYACVVDLLARSGLLAQAEEFILSM---PMKPDASL 694
Query: 306 FSAILSACSHLG 317
+ A+LSAC G
Sbjct: 695 WGALLSACRARG 706
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMRE 265
SL+ +S N ++HS + +GL L V L+ Y++ + VF ++
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
N+ W +I L NG A+ + +M + L+PD+ +F +++++C+ + ++ G
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG-CI 142
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
E A + + ++DM R ++ A ++ M + G C N
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 224/383 (58%), Gaps = 1/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I Y + ++++F +M+ + N T + AC + G VH L+
Sbjct: 344 SWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLL 403
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++ L SD + N+L+ MY+ CK +D+A +FE + + +VSW++MI G+ ++A+
Sbjct: 404 DQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAI 463
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F +M+L N P+S T+VS++ A L + + IH + L+ +V + TALV+MY
Sbjct: 464 DYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMY 523
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG V A K+F++M E+++ +W MI G +G G A+ LF KM + +KP+ ++F
Sbjct: 524 AKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFL 583
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LSACSH GLV+EG YF M + Y ++P M+HYG MVD+LGRA + EA+ I+ MP
Sbjct: 584 CVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPI 643
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP + + LGACR H V L + + L+P+ G +VL A++ + + WD A
Sbjct: 644 EPAISVFGAMLGACRIHKNV-ELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVAR 702
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + +KG+ K PG S V++ +
Sbjct: 703 VRTTMEKKGIQKTPGWSVVELQN 725
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 174/320 (54%), Gaps = 10/320 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSL--DH--NTCIISRFILTSLSISLHFTRSLFNNLPVTP 64
L++L ++ LHQ L +K L +H T ++S F SLH +F P+
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFG---SLHEAARVFQ--PIED 137
Query: 65 PLFA-YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+ Y+T+++ YA+ S +++ F M G+RP + + +++K CG + G +
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H + G S+ + ++ MYA C+ ++ A +F+ MP RD+V W+++I+G+
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG 257
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL++ RM+ + P+S+T+VS++ A + ++R G SIH Y++ G E V + TAL
Sbjct: 258 KTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTAL 317
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MYSKCG V A +F+ M K + SW MI G NG A+ +F KM+ ++ +
Sbjct: 318 VDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTN 377
Query: 304 ISFSAILSACSHLGLVDEGK 323
++ L AC+ LG V++G+
Sbjct: 378 VTVMGALHACADLGDVEQGR 397
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 188/408 (46%), Gaps = 43/408 (10%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L +NT+I YA+ +++L M + G RPD+ T ++ A
Sbjct: 232 MFDRMP-ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ IG S+H + G +S + L+ MY+ C + A+ +F+ M + VVSW+SMI
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V P A+++F +M +VT++ + AC L +V G +H +++ LEL
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHK--LLDQLEL 408
Query: 236 --DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
DV++ +L+ MYSKC V+ A ++F ++ K L SW MI G A NGR N AI F K
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCK 468
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGK----------------------NYFDEMAR 331
M +KPDS + +++ A + L ++ + K + + +
Sbjct: 469 MQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGA 528
Query: 332 VYNIKPTME--------HYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGA 380
V+ + + + M+D G GL + A + M E PN V L A
Sbjct: 529 VHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588
Query: 381 CRNHGQVLYLDDNLG--KLLLKLEPEL---GANYVLAASVSSLSGNWD 423
C + G V G K LEP + GA L + L+ WD
Sbjct: 589 CSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWD 636
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 48/322 (14%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L + L + +++ I + S + +F NL L ++N +I YA+
Sbjct: 399 VHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ-HKTLVSWNAMILGYAQNG 457
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E+I F +M ++PD+FT V+ A ++ +H L+ + LD + ++
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT 517
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MYA C + A+ +F+ M R V +W++MI G+ AL++F +MK P
Sbjct: 518 ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKP 577
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N VT + ++SAC S G VE+ F+ F
Sbjct: 578 NEVTFLCVLSAC-----------------------------------SHSGLVEEGFQYF 602
Query: 261 NLMR-----EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
M+ E + + M+ L R N A KM ++P F A+L AC
Sbjct: 603 GSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKM---PIEPAISVFGAMLGACRI 659
Query: 316 LGLVDEGKNYFDEMARVYNIKP 337
V+ G+ + R++++ P
Sbjct: 660 HKNVELGEKAAN---RIFDLDP 678
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 241/429 (56%), Gaps = 4/429 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L +K LD + + + + ++ + +F+ +PV + + L++ Y K S
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL-WGVLMKGYLKYS 189
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL-IFKVGLDSDKYIG 139
E +LF M TGL D T +VKACG +G VH + I + +D Y+
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+++ MY C+ +D A+ +FE R+VV W+++I+GF C+ +A +F +M +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN TL +++ +C+SL ++R G+S+H Y + NG+E+D T+ ++MY++CG+++ A V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F++M E+N+ SW+ MI+ NG A+ F KM + P+S++F ++LSACSH G V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG F+ M R Y + P EHY CMVD+LGRAG I EA I NMP +P A + L
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H +V L + + LL +EPE + YVL +++ + +G W+ + + KG K
Sbjct: 490 ACRIHKEV-DLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Query: 440 VPGCSWVKV 448
G S +V
Sbjct: 549 HVGQSATEV 557
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 206/423 (48%), Gaps = 38/423 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLP 61
+R + T++ +KT++H Q+H + + + S + S L F S FN +P
Sbjct: 7 ARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66
Query: 62 VTPP-LFAYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
++NT++ Y+K T C + + L++ M + D+F F +KAC L+
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H L K GLD D Y+ +L+ MYA ++ A+ VF+E+PVR+ V W ++ G++
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDV 237
+ ++F M+ + +++TL+ LV AC ++ + G+ +H ++ ++
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
L ++++MY KC ++ A K+F ++N+ WT +ISG A R A LF +M++
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 298 GLKPDSISFSAILSACSHLGLVDEGK-------------------NYFDEMARVYNIK-- 336
+ P+ + +AIL +CS LG + GK ++ D AR NI+
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 337 ---------PTMEHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNH 384
+ + M++ G GL EEA +H +++ PN+V S L AC +
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 385 GQV 387
G V
Sbjct: 427 GNV 429
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 218/386 (56%), Gaps = 9/386 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T++ + +E++ +F M G+ D +T+ ++ ACG + G +H+ I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + + ++G+ L+ MY+ C+ I +A+AVF M R+++SW++MI G+ +A++
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M++ P+ TL S++S+C +L ++ G H A+V+GL + + ALV +Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M + SWT +++G A G+ I LF KM+ GLKPD ++F
Sbjct: 426 KCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACS GLV++G +YFD M + + I P +HY CM+D+ R+G +EA I+ MP
Sbjct: 486 VLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDT 424
P+A + L +CR G + +GK LL+ +P+ A+YVL S+ + G W
Sbjct: 546 PDAFGWATLLSSCRLRGNM-----EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTE 600
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
A L + + + K PGCSW+K +
Sbjct: 601 VAHLRRGMRDRQVKKEPGCSWIKYKN 626
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 34/342 (9%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRC 114
LF ++P + +YN LI ++ T S++L+ +L+ +RP T ++
Sbjct: 101 LFASMPERDAV-SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------- 148
+G SVH + ++G + ++G+ L+ MYA
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 149 -----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
CK I+ AK +F+ M RD ++W++M+ G +AL VF RM+ +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T S+++AC +L + G+ IH+Y E +V +G+ALV+MYSKC + A VF M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+N+ SWT MI G N A+ F++M G+KPD + +++S+C++L ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +A V + + +V + G+ G IE+A+ + M
Sbjct: 400 Q-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +T + N + S + + S S+ ++F + + ++ +I Y +
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN-IISWTAMIVGYGQN 357
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+CS E+++ F EM G++PD+FT V+ +C + G H L GL +
Sbjct: 358 ACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C I+ A +F+EM D VSW++++ G+ + + +F +M
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLK 477
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VT + ++SAC S+ G VEK
Sbjct: 478 PDGVTFIGVLSAC-----------------------------------SRAGLVEKGCDY 502
Query: 260 FNLMREKN-----LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
F+ M++ + +T MI + +GR A +M + PD+ ++ +LS+C
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCR 559
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
G ++ GK + + P Y + M G E H+ R M
Sbjct: 560 LRGNMEIGKWAAENLLETDPQNPA--SYVLLCSMHAAKGQWTEVAHLRRGM 608
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 74/335 (22%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
PP F N L+ AYAK+ + ++FDEM P+ FT
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEMPD----PNLFTR------------------- 82
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
N LL A + + + +F MP RD VS++++I GF + SP
Sbjct: 83 ----------------NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSP 126
Query: 184 SDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ +++++ R L ES P +TL +++ ++L + G S+H + G +G+
Sbjct: 127 ARSVQLY-RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGS 185
Query: 242 ALVEMYSK-------------------------------CGHVEKAFKVFNLMREKNLQS 270
LV+MY+K C +E A +F LM +++ +
Sbjct: 186 PLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSIT 245
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT M++GL NG A+ +F +M G+ D +F +IL+AC L ++EGK +
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R + + + +VDM + I A + R M
Sbjct: 306 RTW-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 262/494 (53%), Gaps = 74/494 (14%)
Query: 30 SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
S+D N + ++S +L + +FN+ P +FAYN L++A+++ + +I F
Sbjct: 54 SIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYF 113
Query: 90 DE--MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH-------------------SLIF 128
+ +L PD +T+ V+KAC + G VH L F
Sbjct: 114 NNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYF 173
Query: 129 KVGLD------------SDKYIGNTLL------------RM------------------- 145
KVG + D NTL+ RM
Sbjct: 174 KVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISG 233
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVT 204
YA ++ A+ +FE MP+R+VVSW++MIAG+ + +DA+++F +M+ +PN VT
Sbjct: 234 YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVT 293
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
LVS++SAC L + G+ IH + N +E+ + LG AL +MY+KCG V +A VF+ M
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 353
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
E+++ SW+I+I GLA G N A + FA+MI+ GL+P+ ISF +L+AC+H GLVD+G
Sbjct: 354 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 413
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
YFD M +VY I P +EHYGC+VD+L RAG +++A +I +MP +PN ++ + LG CR
Sbjct: 414 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCR-- 471
Query: 385 GQVLYLDDNLGKLLLKLEPELGANY----VLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
+Y D G+ ++ EL +N+ V A+V + G D AA + + K
Sbjct: 472 ---IYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKT 528
Query: 441 PGCSWVKVNDGSAE 454
PGCSW+++N+ E
Sbjct: 529 PGCSWIEINNSVYE 542
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 39/428 (9%)
Query: 63 TPPLFAYNTLIRAYAK---TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P YN++IRAY + ++ + M GL DNFT PFV+K+C + +
Sbjct: 140 NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCM 199
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G VH +VGL+ D Y+G +L+ MY C I A+ +F++M VRD+ SW+++IAG++
Sbjct: 200 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMK 259
Query: 180 CDSPSDALKVFHRMKLAN---------------------------------ESPNSVTLV 206
A +F RM+ N PN VT+V
Sbjct: 260 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIV 319
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE- 265
S++ AC + G IH +A GL L+ ++ TAL MY+KC + +A F+++ +
Sbjct: 320 SVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQN 379
Query: 266 -KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
KNL +W MI+ A +G G A+S+F M++ G++PD+++F +LS CSH GL+D G N
Sbjct: 380 GKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN 439
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+F++M +++++P +EHY C+VD+LGRAG + EA +I MP + + + L ACR+H
Sbjct: 440 HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ L + + + L LEP+ NYVL +++ + +G W+ +L + +G+ K PGCS
Sbjct: 500 -RNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCS 558
Query: 445 WVKVNDGS 452
W+++N S
Sbjct: 559 WIEINGKS 566
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 146/360 (40%), Gaps = 71/360 (19%)
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
P +Y + + R I +G H+ I GL + ++ ++ MYA+ ++D A V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 159 FEEMPVRDVVSWSSMIAGFV---ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
F+ + + ++S+I + L+ + RM ++ TL ++ +C L
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN-------------- 261
V G +H + GLE D +G +L++MY KCG + A K+F+
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254
Query: 262 -----------------LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG--LKPD 302
M +N+ SWT MISG NG A+ LF +M+Q G +KP+
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314
Query: 303 SISFSAILSACSHLGLVDEGKNYFD---------------EMARVYNIKPTMEHYGCMVD 347
++ ++L AC+ ++ G+ D +A +Y ++ C D
Sbjct: 315 WVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFD 374
Query: 348 MLGRAG--LIE---------------EAYHIIRNM---PTEPNAVILRSFLGACRNHGQV 387
M+ + G LI EA I NM +P+AV L C + G +
Sbjct: 375 MIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLI 434
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 230/400 (57%), Gaps = 2/400 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+N+ V + ++ +I YA+ ++ LF M + G++PD TY ++
Sbjct: 309 SIEGARRVFDNMKVRD-VVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIM 367
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + +HS + G +D + L+ MYA C I A+ VF+ MP RDVV
Sbjct: 368 NACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVV 427
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SWS+MI +V ++A + FH MK +N P+ VT ++L++AC L + G I++ A
Sbjct: 428 SWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQA 487
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ L V LG AL+ M +K G VE+A +F+ M +++ +W MI G + +G A+
Sbjct: 488 IKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREAL 547
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M++ +P+S++F +LSACS G VDEG+ +F + I PT++ YGCMVD+
Sbjct: 548 YLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDL 607
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG ++EA +I++MP +P + I S L ACR HG L + + + L ++P GA
Sbjct: 608 LGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGN-LDVAERAAERCLMIDPYDGAV 666
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
YV + + + +G W+ A++ + +G+ K GC+W++V
Sbjct: 667 YVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEV 706
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 11/390 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
+ K VH Q+ T + T ++S ++ S+ R +F+ L + + +
Sbjct: 174 LNWGKEVHA--QVVTAGFVSDFRIGTALVSMYVKGG---SMDDARQVFDGLHIRD-VSTF 227
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N ++ YAK+ ++ +LF M + GL+P+ ++ ++ C + G +VH+
Sbjct: 228 NVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMN 287
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
GL D + +L+RMY C I+ A+ VF+ M VRDVVSW+ MI G+ + DA +
Sbjct: 288 AGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGL 347
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M+ P+ +T + +++AC N+ IHS + G D+ + TALV MY+K
Sbjct: 348 FATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAK 407
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG ++ A +VF+ M +++ SW+ MI +NG G A F M ++ ++PD +++ +
Sbjct: 408 CGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINL 467
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L+AC HLG +D G + + + ++ + ++ M + G +E A +I M
Sbjct: 468 LNACGHLGALDVGMEIYTQAIKA-DLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRR 525
Query: 370 NAVILRSFLGACRNHG---QVLYLDDNLGK 396
+ + + +G HG + LYL D + K
Sbjct: 526 DVITWNAMIGGYSLHGNAREALYLFDRMLK 555
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 174/332 (52%), Gaps = 3/332 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+++ + +N LI YA+ E+ LF +M+ GL P T+ V+ AC
Sbjct: 112 RQIFDSVE-NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G VH+ + G SD IG L+ MY +D A+ VF+ + +RDV +++ M
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ G+ A ++F+RM+ PN ++ +S++ C + + G+++H+ + GL
Sbjct: 231 VGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGL 290
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D+ + T+L+ MY+ CG +E A +VF+ M+ +++ SWT+MI G A+NG A LFA
Sbjct: 291 VDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFAT 350
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G++PD I++ I++AC+ ++ + ++ + + +V M + G
Sbjct: 351 MQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVD-IAGFGTDLLVSTALVHMYAKCG 409
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
I++A + MP + V + +GA +G
Sbjct: 410 AIKDARQVFDAMPRR-DVVSWSAMIGAYVENG 440
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 152/316 (48%), Gaps = 35/316 (11%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
D+ TY + + C +G V I + G + Y NTL+++Y+ C + A+ +F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+ + + VV+W+++IAG+ +A +F +M P+ +T +S++ AC+S +
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G+ +H+ V G D +GTALV MY K G ++ A +VF+ + +++ ++ +M+ G A
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAIL----------------SACSHLGLVDEGK 323
+G A LF +M Q GLKP+ ISF +IL + C + GLVD+ +
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 324 NYFDEMARVYNIKPTME---------------HYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ R+Y ++E + M++ G IE+A+ + M E
Sbjct: 296 -VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEE 354
Query: 369 ---PNAVILRSFLGAC 381
P+ + + AC
Sbjct: 355 GIQPDRITYMHIMNAC 370
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A V R+ +S T V L CT L + G+ + + + G +L++ L++
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+YS CG+V +A ++F+ + K + +W +I+G A G A +LF +M+ GL+P I+
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 306 FSAILSACSHLGLVDEGK 323
F ++L ACS ++ GK
Sbjct: 161 FLSVLDACSSPAGLNWGK 178
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 240/415 (57%), Gaps = 33/415 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ LI Y++ + E++ F+ ML G+ PD T ++ AC + + G S+H
Sbjct: 202 VISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHK 261
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEI--------------------------------D 153
L+ + G+ + L+ MYA C +I D
Sbjct: 262 LVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVD 321
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
VA+ +F++M RD+V+++S+I G++ +AL +F +M+ + ++ T+VSL++AC
Sbjct: 322 VARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACA 381
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
SL + G ++H+ +E+D+ LGTAL++MY KCG VE+A VF M +++ +W+
Sbjct: 382 SLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSA 441
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
MI+GLA NG G A+ F M G +P+S+++ AIL+ACSH L+DEG+ YF+EM ++
Sbjct: 442 MIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLH 501
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
NI+P +EHYGCM+D+LGR+GL++EA ++R MP +PNAVI S L ACR H L N
Sbjct: 502 NIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDA-NLARN 560
Query: 394 LGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ LLKLEP+ A YV ++ S W+ A+++ + ++G+ K G S + V
Sbjct: 561 AAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITV 615
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 173/384 (45%), Gaps = 69/384 (17%)
Query: 48 ISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIES-IKLFDEMLKTGLRPDNFTYPF 106
+ L + LF+ +P + F ++T +RA + S ES + L+ M +TG+ D FT+ F
Sbjct: 51 LHLRYALCLFDRMPCST--FLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHF 108
Query: 107 VVKACGRCLL-IGIGGSVHSLIFKVGLDSD-KYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
+ K C R + + +H+ F+ L S + N ++ MY A+ F+++PV
Sbjct: 109 LFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPV 168
Query: 165 RD-------------------------------VVSWSSMIAGFVACDSPSDALKVFHRM 193
+D V+SW+ +I+G+ ++A+ F+ M
Sbjct: 169 KDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSM 228
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
P+ VT++ L+SAC L ++ G S+H G+ + L AL++MY+KCG +
Sbjct: 229 LSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDI 288
Query: 254 EKAFKVFN-LMREKNLQSWTIMISGLAD-------------------------------N 281
+A++VF+ L R + QSW MI G
Sbjct: 289 GRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHG 348
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GR A+ LF +M + L+ D+ + ++L+AC+ LG + +G+ + + ++ +
Sbjct: 349 GRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRL-VEVDIYL 407
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNM 365
++DM + G +EEA + + M
Sbjct: 408 GTALLDMYLKCGRVEEASLVFQAM 431
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 231/395 (58%), Gaps = 3/395 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT-YPFVVKACGRC 114
+F+ +PV + ++ LI + E+ LF +ML GL + T ++ C
Sbjct: 262 VFHGMPVRNDV-TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASL 320
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G +H+LI K G+ +D N+LL MYA I+ A F+E+ V+D +S+ +++
Sbjct: 321 ADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALL 380
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G V +A VF +M+ N P+ T+VSL+ AC+ L ++ G+ H ++ GL
Sbjct: 381 SGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLA 440
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
L+ ++ +L++MY+KCG ++ + +VF+ M +++ SW MI+G +G G A +LF M
Sbjct: 441 LETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGM 500
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G PD ++F +++ACSH GLV EGK++FD M Y I P MEHY CMVD+L R GL
Sbjct: 501 KNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGL 560
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
++EAY I++MP + + + + LGACR H + L + +++ KL PE N+VL ++
Sbjct: 561 LDEAYQFIQSMPLKADVRVWGALLGACRIHKNI-DLGKQVSRIIQKLGPEGTGNFVLLSN 619
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ S +G +D AAE+ + KG K PG SW+++N
Sbjct: 620 IFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 53/378 (14%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L R +F+ +P P AYN LIRAY+ +I L+ ML+ + P+ +T+PFV+
Sbjct: 49 QLALARQVFDRIP-APDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + + G ++H+ GL +D ++ L+ +Y C A+ VF +MP+RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIH 225
+W++M+AG+ A + H + + + PN+ TLVSL+ + G SIH
Sbjct: 168 AWNAMLAGYANHGMYHHA--IAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 226 SYAVVNGLELD---VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+Y + LE + V +GTAL++MY+KC + A +VF+ M +N +W+ +I G
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285
Query: 283 RGNYAISLFAKMI------------------------------------QTGLKPDSISF 306
R A +LF M+ ++G+ D +
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LS + GL++E +FDE+A +K T+ YG ++ + G EEA+ + + M
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIA----VKDTIS-YGALLSGCVQNGKAEEAFLVFKKMQ 400
Query: 367 T---EPNAVILRSFLGAC 381
EP+ + S + AC
Sbjct: 401 ACNMEPDIATMVSLIPAC 418
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 14/254 (5%)
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
DK L + + ++ +A+ VF+ +P D +++++I + A+ ++ M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+PN T ++ AC++L+++RAG +IH++A GL D+ + TAL+++Y +C
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSAC 313
A VF M +++ +W M++G A++G ++AI+ M GL+P++ + ++L
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHY-------GCMVDMLGRAGLIEEAYHIIRNMP 366
+ G + +G + Y ++ +E ++DM + + A + MP
Sbjct: 213 AQHGALFQGTSI-----HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMP 267
Query: 367 TEPNAVILRSFLGA 380
N V + +G
Sbjct: 268 VR-NDVTWSALIGG 280
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 228/398 (57%), Gaps = 2/398 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R ++++P + A+N LI Y++ ++++ LF +M + + T V+K+
Sbjct: 338 ARRAYDSMP-KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVA 396
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
I + +H++ K G+ SD Y+ N+LL Y C ID A +FEE D+V+++S
Sbjct: 397 SLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTS 456
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI + +ALK++ +M+ A+ P+ SL++AC +L G+ +H +A+ G
Sbjct: 457 MITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFG 516
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
D+ +LV MY+KCG +E A + F+ + + + SW+ MI G A +G G A+ LF
Sbjct: 517 FMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFN 576
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M++ G+ P+ I+ ++L AC+H GLV+EGK YF++M ++ IKPT EHY CM+D+LGR+
Sbjct: 577 QMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRS 636
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G + EA ++ ++P E + + + LGA R H + L K+L LEPE +VL
Sbjct: 637 GKLNEAVELVNSIPFEADGFVWGALLGAARIHKNI-ELGQKAAKMLFDLEPEKSGTHVLL 695
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
A++ + +G W+ A++ + + K PG SW+++ D
Sbjct: 696 ANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKD 733
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 188/367 (51%), Gaps = 4/367 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L LK LD + + + + S + + ++F ++ P + ++N +I
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDI-AHPDVVSWNAIIAGCVLH 262
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C+ ++ L DEM +G RP+ FT +KAC +G +HS + K+ SD +
Sbjct: 263 DCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAA 322
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ MY+ C+ +D A+ ++ MP +D+++W+++I+G+ C DA+ +F +M +
Sbjct: 323 VGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDID 382
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N TL +++ + SL ++ + IH+ ++ +G+ D + +L++ Y KC H+++A K+
Sbjct: 383 FNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKI 442
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F ++L ++T MI+ + G G A+ L+ +M +KPD S++L+AC++L
Sbjct: 443 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAY 502
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++GK + + + +V+M + G IE+A +P V + +G
Sbjct: 503 EQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR-GIVSWSAMIG 560
Query: 380 ACRNHGQ 386
HG
Sbjct: 561 GYAQHGH 567
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 34/364 (9%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+R LF + V + ++N L Y ++ E++ LF EM+++G+ P+ F+ ++ AC
Sbjct: 136 SRRLFGGI-VERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA 194
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+G +H L+ K+GLD D++ N L+ MY+ EI+ A AVF+++ DVVSW++
Sbjct: 195 GLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNA 254
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IAG V D AL + MK + PN TL S + AC ++ G +HS +
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
D+ LV+MYSKC ++ A + ++ M +K++ +W +ISG + G A+SLF+
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374
Query: 293 KMIQTGLKPDSISFSAILSACSHL--------------------------GLVDE-GK-N 324
KM + + + S +L + + L L+D GK N
Sbjct: 375 KMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN 434
Query: 325 YFDEMARVYNIK--PTMEHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLG 379
+ DE ++++ + + Y M+ + G EEA Y +++ +P+ I S L
Sbjct: 435 HIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLN 494
Query: 380 ACRN 383
AC N
Sbjct: 495 ACAN 498
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 168/321 (52%), Gaps = 7/321 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++++L+ Y + E++ +F+EM G++ + FT+P V+KAC + +G VH +
Sbjct: 49 SWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMA 108
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
G +SD ++ NTL+ MYA C +D ++ +F + R+VVSW+++ + +V + +A+
Sbjct: 109 VVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAV 168
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M + PN ++ +++AC L G IH + GL+LD ALV+MY
Sbjct: 169 GLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMY 228
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SK G +E A VF + ++ SW +I+G + + A+ L +M +G +P+ + S
Sbjct: 229 SKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLS 288
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+ L AC+ +G + G+ + ++ G +VDM + ++++A +MP
Sbjct: 289 SALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMPK 347
Query: 368 EP----NAVILRSFLGACRNH 384
+ NA+I S C +H
Sbjct: 348 KDIIAWNALI--SGYSQCGDH 366
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 2/262 (0%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ + K G D + N L+ +Y+ C+ A+ + +E DVVSWSS+++G+V
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+AL VF+ M L N T S++ AC+ ++ G +H AVV G E D +
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV MY+KCG ++ + ++F + E+N+ SW + S + A+ LF +M+++G+ P+
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
S S IL+AC+ L D G+ M ++ + +VDM +AG IE A +
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 363 RNMPTEPNAVILRSFLGACRNH 384
+++ P+ V + + C H
Sbjct: 242 QDI-AHPDVVSWNAIIAGCVLH 262
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 240/421 (57%), Gaps = 10/421 (2%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNL-PVTPPLF-------AYNTLIRAYAKTSCSIESIK 87
C+ F+ T L IS++ SL +N V F YN L+ Y S +++
Sbjct: 71 CVFEPFVQTGL-ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVL 129
Query: 88 LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA 147
LF +M + G+ ++ T ++ AC + + +G S+H K G DSD + N + MY
Sbjct: 130 LFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYM 189
Query: 148 ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
C ++ A+ +F+EMPV+ ++SW++M++G+ ++ L+++ M + P+ VTLV
Sbjct: 190 KCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVG 249
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
++S+C +L G + +G + L AL+ MY++CG++ KA VF+ M E+
Sbjct: 250 VLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERT 309
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L SWT +I G +G G A+ LF +MI++G++PD +F +LSACSH GL D+G YF
Sbjct: 310 LVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK 369
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M R Y ++P EHY CMVD+LGRAG ++EA +I +MP +P+ + + LGAC+ H V
Sbjct: 370 MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 429
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L + + +++LEPE YVL +++ S + N + + + +K L K PGCS+V+
Sbjct: 430 -ELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVE 488
Query: 448 V 448
+
Sbjct: 489 L 489
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 10/364 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NT +R AK ++++ L+ +ML+ G RP+ FT+PF +K+C L +G H I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE--MPVRDVVSWSSMIAGFVACDSPSDA 186
KVG + ++ L+ MY +D A+ VFEE + V ++++++G+V+ SDA
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F +M NSVTL+ L+ AC S IN+ G S+H + G + DV++ + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG V A K+F+ M K L SW M+SG A NG + L+ M G+ PD ++
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 307 SAILSACSHLGLVDEGKNY-FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+LS+C++LG G F A + P + + +++M R G + +A + M
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 305
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK--LEPELGANYVLAASVSSLSGNWD 423
P E V + +G HG + L K +++ +EP+ G +V S S +G D
Sbjct: 306 P-ERTLVSWTAIIGGYGMHGHG-EIAVQLFKEMIRSGIEPD-GTAFVCVLSACSHAGLTD 362
Query: 424 TAAE 427
E
Sbjct: 363 QGLE 366
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 246/438 (56%), Gaps = 14/438 (3%)
Query: 21 QLHTLFLKTSL--DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH+ +++ L D ++ + S S+ R +F+ + + ++ LI Y K
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMK 348
Query: 79 T-SCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ + E+I LF EM+ G + P++FT+ KACG +G V FK GL S+
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N+++ M+ ++ A+ FE + +++VS+++ + G + A K+ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
++ T SL+S ++ ++R GE IHS V GL + + AL+ MYSKCG ++ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VFN M +N+ SWT MI+G A +G + F +MI+ G+KP+ +++ AILSACSH+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV EG +F+ M + IKP MEHY CMVD+L RAGL+ +A+ I MP + + ++ R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
FLGACR H LGKL +L+L+P A Y+ +++ + +G W+ + E+ +
Sbjct: 649 FLGACRVHSNT-----ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 433 NQKGLNKVPGCSWVKVND 450
++ L K GCSW++V D
Sbjct: 704 KERNLVKEGGCSWIEVGD 721
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 186/361 (51%), Gaps = 18/361 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+++ ++ Y +++IK+F E L+ GL P+++ Y V++AC +G+G +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 128 FKVG-LDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K G +SD +G +L+ M+ + + A VF++M +VV+W+ MI + P +
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++ F M L+ + TL S+ SAC L N+ G+ +HS+A+ +GL DV +LV+
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVD 310
Query: 246 MYSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADN-GRGNYAISLFAKMIQTG-LK 300
MY+KC G V+ KVF+ M + ++ SWT +I+G N AI+LF++MI G ++
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ +FS+ AC +L GK + A + ++ M ++ +E+A
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 361 IIRNMPTEPNAVILRSFL-GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ +E N V +FL G CRN L + L E ELG + AS+ LS
Sbjct: 430 AFESL-SEKNLVSYNTFLDGTCRN----LNFEQAFKLLSEITERELGVSAFTFASL--LS 482
Query: 420 G 420
G
Sbjct: 483 G 483
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 63/427 (14%)
Query: 85 SIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++ D M + G+RP D+ T+ ++K+C R +G VH+ + + ++ D + N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 144 RMYAACKEIDVAKAVFEEMP---VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+Y+ + A+ VFE M RDVVSWS+M+A + DA+KVF P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSKCGH-VEKAFK 258
N +++ AC++ V G + + G E DV +G +L++M+ K + E A+K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL-- 316
VF+ M E N+ +WT+MI+ G AI F M+ +G + D + S++ SAC+ L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 317 --------------GLVDE-------------GKNYFDEMARVYNIKPTMEHYGCM---- 345
GLVD+ D+ +V++ ME + M
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFD---RMEDHSVMSWTA 341
Query: 346 --VDMLGRAGLIEEAYHIIRNMPT----EPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+ L EA ++ M T EPN S AC N D +GK +L
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS-----DPRVGKQVL 396
Query: 400 --KLEPELGANYVLAASVSSL---SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ L +N +A SV S+ S + A ++++K L S+ DG+
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL-----VSYNTFLDGTCR 451
Query: 455 EMSKETA 461
++ E A
Sbjct: 452 NLNFEQA 458
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 242/431 (56%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+ +K ++ ++ + + + S L R +F+ +P + +N++I Y+
Sbjct: 310 QLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP-XKDVIVWNSIISGYSNC 368
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
IE++ LF M K GL + T ++K+ G VH++ K G D Y+
Sbjct: 369 GYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVA 428
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+LL Y C ++ A VFE P D+V+++SMI + +ALK++ RM+ +
Sbjct: 429 NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++ SL +AC +L G+ IH + + GL DV G +LV MY+KCG ++ A +
Sbjct: 489 PDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCI 548
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN + + + SW+ MI GLA +G G A+ LF +M++ G+ P+ I+ ++LSAC+H GLV
Sbjct: 549 FNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLV 608
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
E + +F M +++ I PT EHY CMVD+LGR G ++EA +++ MP + +A + + LG
Sbjct: 609 TEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLG 668
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
A R H + L + ++LL LEPE ++L A++ + +G WD A++ ++ + K
Sbjct: 669 AARIHKNI-ELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKK 727
Query: 440 VPGCSWVKVND 450
PG SW+++ D
Sbjct: 728 EPGMSWIELKD 738
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 164/335 (48%), Gaps = 33/335 (9%)
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
I + L EM+ TG+ P+ F+ V+ AC G VH + K+G DSD + N
Sbjct: 169 QIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANA 228
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
LL MYA + A AVF E+P D+VSW+++IAG V + ALK+ +M +P+
Sbjct: 229 LLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPS 288
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
TL S + AC ++ V+ G +HS + +E D +G L++MYSKCG ++ A VF+
Sbjct: 289 MFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFD 348
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS------- 314
LM K++ W +ISG ++ G A+SLF M + GL+ + + S IL + +
Sbjct: 349 LMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGF 408
Query: 315 ----HLGLVDEGKNY-----------------FDEMARVYNIKPTME--HYGCMVDMLGR 351
H + G Y ++ A+V+ + P + Y M+ +
Sbjct: 409 CEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQ 468
Query: 352 AGLIEEA---YHIIRNMPTEPNAVILRSFLGACRN 383
GL EEA Y +++ +P+A I S AC N
Sbjct: 469 YGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACAN 503
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 167/332 (50%), Gaps = 3/332 (0%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++F +P P + ++N +I + ++KL +M + P FT +KAC
Sbjct: 244 AVFYEIP-KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAI 302
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L+ +G +HS + K+ ++ D ++G L+ MY+ C + A+ VF+ MP +DV+ W+S+I
Sbjct: 303 GLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSII 362
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+G+ C +A+ +F M N TL +++ + E +H+ ++ +G +
Sbjct: 363 SGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQ 422
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D + +L++ Y KC +E A KVF + ++L ++T MI+ + G G A+ ++ +M
Sbjct: 423 YDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRM 482
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+KPD+ FS++ +AC++L ++GK + + + +V+M + G
Sbjct: 483 QDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG-NSLVNMYAKCGS 541
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
I++A I N + V + +G HG
Sbjct: 542 IDDA-SCIFNEISWRGIVSWSAMIGGLAQHGH 572
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 42/283 (14%)
Query: 143 LRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL--------------- 187
+ +Y+ C+ VA+ + + D+VSWS++I+G+V +AL
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 188 -------------------KVFHRMKLANE------SPNSVTLVSLVSACTSLINVRAGE 222
K HR+ L E SPN +L ++++AC L + G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H Y + G + D AL++MY+K G E A VF + + ++ SW +I+G +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ + A+ L KM + P + S+ L AC+ +GLV G+ + ++ +++P
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVG 327
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++DM + GL+++A + MP + + ++ S + N G
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISGYSNCG 369
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 221/374 (59%), Gaps = 1/374 (0%)
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y++ E++ L+ EM+ + NF + +KAC + G +VH+ + K D
Sbjct: 152 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDP 211
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D+ + N LLR+Y+ D A VF+ MP R+VVSW+S+IAG V D +A++ F M+
Sbjct: 212 DQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQ 271
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ VTL +++ C + + +G+ IH+ V + + D + +LV+MY+KCG ++
Sbjct: 272 GKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMD 331
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+VFN M+ K+L SW +I+G A NGR A+ F +MI +G PD I+F A+LS CS
Sbjct: 332 YCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 391
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GL D+G F+ M Y I PT+EHY C+VD+LGRAG I+EA I++NMP +P I
Sbjct: 392 HAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIW 451
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S L +CR HG V L + + K L +LEP NYV+ +++ + +G W++ + + +
Sbjct: 452 GSLLNSCRLHGNV-PLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEK 510
Query: 435 KGLNKVPGCSWVKV 448
+G+ K GCSW+++
Sbjct: 511 RGMTKEAGCSWLQI 524
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 18/299 (6%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYAKT 79
+H LK + D + +++ +L S F +L F+ +P + ++N+LI K
Sbjct: 200 VHAQVLKATEDPDQ-VVNNALLRLYSEDGCFDEALRVFDGMP-HRNVVSWNSLIAGLVKK 257
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+I+ F M G+ T ++ C R +G G +H++I K D +
Sbjct: 258 DGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVL 317
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ MYA C +D + VF M +D+ SW+++I G+ ++A++ F M + S
Sbjct: 318 NSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFS 377
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG------TALVEMYSKCGHV 253
P+ +T ++L+S C+ AG + + +++D + LV++ + G +
Sbjct: 378 PDGITFIALLSGCS-----HAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRI 432
Query: 254 EKAFKVFNLMREKNLQS-WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++A ++ M K S W +++ +G A ++ ++ + L+P++ +LS
Sbjct: 433 KEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE--LEPNNAGNYVMLS 489
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDV----VSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
L+ +++ C+ +D A+ VFE+ DV W +M G+ P +AL +++ M
Sbjct: 115 LITLFSVCRRVDEARRVFEDGG-EDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQF 173
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ + AC+ L +++ G ++H+ + + D + AL+ +YS+ G ++A
Sbjct: 174 GQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEAL 233
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ M +N+ SW +I+GL AI F M G+ ++ + IL C+ +
Sbjct: 234 RVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 293
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ GK + + KP +VDM + G ++ + M
Sbjct: 294 ALGSGKEIHAVIVK-STAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGM 340
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREK-NLQS--WTIMISGLADNGRGNYAISLFAKMI 295
L L+ ++S C V++A +VF E +L W M G + NG A+ L+ +M+
Sbjct: 111 LKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMV 170
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + +FS L ACS LG + G+ ++ + P ++ + G
Sbjct: 171 CQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATE-DPDQVVNNALLRLYSEDGCF 229
Query: 356 EEAYHIIRNMP 366
+EA + MP
Sbjct: 230 DEALRVFDGMP 240
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 234/399 (58%), Gaps = 4/399 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKA-C 111
R +F+ + + + ++N++I+AY ++ ++F M+ G P N VV A C
Sbjct: 185 ARRVFDGI-LRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAAC 243
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ +G + + VG++ +G+ L+ MY C E+ A+ VF+ + +D V+W+
Sbjct: 244 RDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWN 303
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
++I G+ +A+ +FH M+ A P+ +TLV ++SAC ++ + G + YA+
Sbjct: 304 ALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQR 363
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G +V +GTALV+MYSKCG + +A +VF + KN SW +I GLA NGRG AI F
Sbjct: 364 GFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQF 423
Query: 292 AKM-IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
M Q GL+PD I+F +LSAC H GL+ +G+ +FD + + I P +EHY CMVD+L
Sbjct: 424 ELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLA 483
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG +EEA+ I +P +P+AV+L + L ACR V + K++L LEP NYV
Sbjct: 484 RAGHLEEAWDFIEKIPGKPDAVMLGALLAACRKCKNVEVSVRVINKIML-LEPSNSWNYV 542
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + + S D +A + + ++G++K+PGCSW++V+
Sbjct: 543 VSSKIYASSDRLDDSARMRGLMRERGVSKIPGCSWIEVS 581
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 3/310 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
TP F++N +R +A S +++L ML+ LRPD +T PF++ A RC S
Sbjct: 94 TPTAFSFNVALRFFA-ASRPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAAS 152
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+L+ K+GL + + ++L+ MY+ A+ VF+ + RDVVSW+SMI + A
Sbjct: 153 AHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGM 212
Query: 183 PSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
DA ++F M PN+VT+ +++AC ++ G + + G+E+ +G+
Sbjct: 213 KDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGS 272
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV MY KCG + +A +VF+ + K+ +W +I+G A NG AISLF M Q G +P
Sbjct: 273 ALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARP 332
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D I+ +LSAC+ +G ++ G D A + +VDM + G + A +
Sbjct: 333 DKITLVGVLSACAAVGALELGTE-LDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQV 391
Query: 362 IRNMPTEPNA 371
+P + A
Sbjct: 392 FEKLPCKNEA 401
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ R +F+ + + L ++NT+I Y + E++ +F EM G + FT V+
Sbjct: 114 VELARQVFDGM-LERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLS 172
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG +H L K LD + Y+G LL +YA C I+ A VFE M + V+
Sbjct: 173 ACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT 232
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WSSM+AG+V + +AL ++ R + + N TL S++ AC++L + G+ +H+
Sbjct: 233 WSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIR 292
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G +V + ++ V+MY+KCG + +++ +F+ ++EKN++ W +ISG A + R +
Sbjct: 293 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMI 352
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF KM Q G+ P+ ++FS++LS C H GLV+EG+ +F M Y + P + HY CMVD+L
Sbjct: 353 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 412
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GRAGL+ EAY +I+++P EP A I S L +CR + L L + K L +LEPE N+
Sbjct: 413 GRAGLLSEAYELIKSIPFEPTASIWGSLLASCRV-CKNLELAEVAAKKLFELEPENAGNH 471
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + + W+ A+ + + KV G SW+ + D
Sbjct: 472 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKD 512
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 161/335 (48%), Gaps = 17/335 (5%)
Query: 67 FAYNTLIRA-----YAKTSCSIESIKLFDEMLKTGLRPDNFTYPF----------VVKAC 111
F N LIR + TS +I +F + L P ++ F +++ C
Sbjct: 14 FTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLC 73
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
R + + H ++ L D + N L+ Y+ C +++A+ VF+ M R +VSW+
Sbjct: 74 ARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWN 133
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+MI + S+AL +F M+ + T+ S++SAC + + + +H ++
Sbjct: 134 TMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKT 193
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
L+L++ +GTAL+++Y+KCG + A +VF M++K+ +W+ M++G + A+ L+
Sbjct: 194 SLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLY 253
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+ + L+ + + S+++ ACS+L + EGK + R + VDM +
Sbjct: 254 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVIRKSGFGSNVFVASSAVDMYAK 312
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G + E+Y II + E N + + + H +
Sbjct: 313 CGSLRESY-IIFSEVQEKNIELWNTIISGFAKHAR 346
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 21 QLHTLFLKTSLDHN----TCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+LH L +KTSLD N T ++ + + + ++ S+ + VT +++++
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT-----WSSMVAG 239
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
Y ++ E++ L+ + L + FT V+ AC + G +H++I K G S+
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ ++ + MYA C + + +F E+ +++ W+++I+GF P + + +F +M+
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHS-YAVVNGLELDVALGTALVEMYSKCGHVE 254
PN VT SL+S C V G GL +V + +V++ + G +
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 419
Query: 255 KAFKV 259
+A+++
Sbjct: 420 EAYEL 424
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 254/475 (53%), Gaps = 38/475 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLF 67
L+Q + + Q+H + T L + + I L L +F +P +P +
Sbjct: 72 LLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMP-SPDIV 130
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I YAK +E+++LF EM+ GL PD FT ++ +CG+ + G +VH +
Sbjct: 131 SFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWM 190
Query: 128 --FKVGLDSDKYIGNTLLRMYAACK-------------------------------EIDV 154
K + S+ +GN LL MY C+ E++
Sbjct: 191 ERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQ 250
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ F +MP RD+VSW+S++ G+ + ++ M + P++VT++SLVSA T
Sbjct: 251 ARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATE 310
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ G H + + ++LD LG+AL++MY KCG +E+A +VF + +K++ WT M
Sbjct: 311 SGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTM 370
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I+GLA +G G+ A+ LF++M Q + PD ++F ++LSACSH GLVD+G F M Y
Sbjct: 371 ITGLAFHGYGSKALELFSEM-QEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTD-YG 428
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I+P +EHYGC+VD+L R+G + EA II MP +P+ I + L AC+ G V L +
Sbjct: 429 IEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDV-ELAEIA 487
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ LL L+PE Y L +++ + SG W + ++ + +G+ K GCS V V+
Sbjct: 488 SRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVVVD 542
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 41/364 (11%)
Query: 38 ISRFIL---TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
+SRFI S +L +LFN+ P LF YNTLI A++ IES L++ +L
Sbjct: 1 MSRFIYFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFSSLK-KIESFYLYNVLLS 59
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
+G PD T ++++A I +H GL S Y+ NTL+++Y + +
Sbjct: 60 SGECPDKQTLLYLLQAVN---FISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRL 116
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VFE+MP D+VS++ MI G+ +A+++FH M P+ T++ L+ +C
Sbjct: 117 AHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQ 176
Query: 215 LINVRAGESIHSYAVVNG--LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L NV+ G+++H + + ++ LG AL++MY KC VE A + F ++EK++ SW
Sbjct: 177 LGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWN 236
Query: 273 IMISGLADNG-----------------------------RGNYA--ISLFAKMIQTGLKP 301
++++G A G RG++A L M+ + P
Sbjct: 237 MIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIP 296
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D+++ +++SA + G +D+G+ + R+ IK ++DM + G IE A +
Sbjct: 297 DTVTMISLVSAATESGALDQGRWAHGWVIRM-QIKLDAFLGSALIDMYCKCGSIERASRV 355
Query: 362 IRNM 365
+ +
Sbjct: 356 FKEI 359
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 240/413 (58%), Gaps = 2/413 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R LF+ + + + ++N++I AY + E++ +F +ML G++P + + +
Sbjct: 286 SLKTARLLFDGM-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +H L ++ LD + + N+L+ MY CKE+D A ++F ++ R +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIV 404
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI GF P +AL F +M+ P++ T VS+++A L + IH
Sbjct: 405 SWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ N L+ +V + TALV+MY+KCG + A +F++M E+++ +W MI G +G G A+
Sbjct: 465 MRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAAL 524
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M + ++P+ ++F +++SACSH GLV+ G F M Y+I+P+M+HYG MVD+
Sbjct: 525 ELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDL 584
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + EA+ I MP +P + + LGAC+ H V + + + + L +L PE G
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA-EKVAERLFELNPEDGGY 643
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+VL A++ + W+ ++ V++ ++GL K PGCS V++ + S TA
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 147/255 (57%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y T+++ +AK S +++K F M + P + + +++K CG + +G +H L+
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D + L MYA C+++ A+ VF+ MP RD+VSW++++AG+ AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ + M N P+ +T+VS++ A ++L +R G+ IH YA+ G + V + TALV+MY+
Sbjct: 223 MVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYA 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ A +F+ M E+N+ SW MI N A+ +F KM+ G+KP +S
Sbjct: 283 KCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMG 342
Query: 309 ILSACSHLGLVDEGK 323
L AC+ LG ++ G+
Sbjct: 343 ALHACADLGDLERGR 357
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 186/374 (49%), Gaps = 17/374 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+H R +F+ +P L ++NT++ Y++ + ++++ + M + L+P T V+
Sbjct: 185 QVHEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVL 243
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
A LI IG +H + G DS I L+ MYA C + A+ +F+ M R+VV
Sbjct: 244 PAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVV 303
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+SMI +V ++P +A+ +F +M P V+++ + AC L ++ G IH +
Sbjct: 304 SWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V L+ +V++ +L+ MY KC V+ A +F ++ + + SW MI G A NGR A+
Sbjct: 364 VELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEAL 423
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR---VYNIKPTMEHYGCM 345
+ F++M +KPD+ ++ ++++A + L + K + R N+ T +
Sbjct: 424 NYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTT----AL 479
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VDM + G I A +I +M +E + + + HG +GK L+L E+
Sbjct: 480 VDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG--------IGKAALELFEEM 530
Query: 406 GANYVLAASVSSLS 419
+ V+ LS
Sbjct: 531 QKGTIRPNGVTFLS 544
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
LIFK GL + L+ ++ +D A VFE + + V + +M+ GF
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDK 118
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
ALK F RM+ P L+ C +R G+ IH V +G LD+ T L
Sbjct: 119 ALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KC V +A KVF+ M E++L SW +++G + NG A+ + M + LKP I+
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++L A S L L+ GK R + +VDM + G ++ A + M
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 366 PTEPNAVILRSFLGA 380
E N V S + A
Sbjct: 298 -LERNVVSWNSMIDA 311
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
I + +LS T HH +H + ++ LD N + + + + + ++ R +F+ +
Sbjct: 445 ITAIAELSIT-HHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ER 502
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
+ +N +I Y +++LF+EM K +RP+ T+ V+ AC L+ G
Sbjct: 503 HVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAG 558
>gi|297791497|ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309468|gb|EFH39892.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 460
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 250/448 (55%), Gaps = 17/448 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
LI K++ +L Q+H + L H+T +S+ + S ++ L + S+ +P P +F
Sbjct: 15 LIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIP-NPSVFL 73
Query: 69 YNTLIRAYAKTSCSIES---IKLFDEMLKTG---LRPDNFTYPFVVKACG---RCLLIGI 119
YNTLI + S ++ L+D++L + +RP+ FTYP + KA G + G
Sbjct: 74 YNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFETKWHRHGR 133
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV- 178
H L F ++ D+++ L+ YA C E+ A+++ E + D+ +W++++A +
Sbjct: 134 ALHAHVLKFIEPVNHDRFVQAALVGFYANCGELREARSLLERIREPDLATWNTLLAAYAN 193
Query: 179 --ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+S + LK+F RM++ PN ++LV+L+ +C +L G H Y + L L+
Sbjct: 194 SEETESDEEVLKLFVRMQV---RPNELSLVALIKSCANLGEFWGGVWAHVYLLKKNLTLN 250
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+GT+L++ YSKCG + A +VF+ M E+++ + MI GLA +G G I L+ +I
Sbjct: 251 QFVGTSLIDFYSKCGCLSFARQVFDEMSERDISCFNAMIRGLAVHGFGQEGIELYNSLIS 310
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
GL PD+ +F +SACSH GLVDEG F M VY I+P +EHYGC+VD+LGR+G +E
Sbjct: 311 QGLVPDNATFVVTISACSHSGLVDEGLQIFHSMKTVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA I+ MP +PNA + RSFLG+ + HG + + L K LL LE E NYVL +++
Sbjct: 371 EAEECIKKMPMKPNATLWRSFLGSAQIHGDLERGEIAL-KQLLGLEFENSGNYVLLSNIY 429
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ W + + +NK PG S
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 218/381 (57%), Gaps = 2/381 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N+LI Y ++ E ++ F +M+K +PD+ T+ ++ + I G +H +
Sbjct: 391 WNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +++ IGN+LL +YA C E+D VF M D++SW+++IA V D + +
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ + M+ P+ T++ ++ C+ L R G+ IH Y +G E +V +G AL+EMYS
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E KVF M+EK++ +WT +IS G G A+ F M +G+ PDS++F A
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ ACSH G+V EG +FD M YN++P MEHY C+VD+L R+GL+ +A I +MP +
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A + + L ACR G + + K +L+L + YVL +++ + G WD +
Sbjct: 690 PDASLWGALLSACRARGNT-NIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTV 748
Query: 429 MVAINQKGLNKVPGCSWVKVN 449
++ KGL K PG SW+++
Sbjct: 749 RNSMKTKGLKKEPGSSWIEIQ 769
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 174/315 (55%), Gaps = 8/315 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTC----IISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
+K L +H+L + + L + +IS++ IS + S+F ++ T ++
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS---SVSVFRSISPTNNVYL 88
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++IRA +++ + EM + L+PD FT+P V+ +C R L + +G VH
Sbjct: 89 WNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAM 148
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
++G +SD YIGN L+ MY+ ++D A+ VFEEM RD VSW+S+I+G+ + DAL
Sbjct: 149 EMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALD 208
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++H+ ++ P+ T+ S++ AC SL+ V+ G ++H G+ DV +G L+ MY
Sbjct: 209 MYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYF 268
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K + +A +VF+ M K+ +W MI G A GR ++ LF MI G PD +S ++
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITS 327
Query: 309 ILSACSHLGLVDEGK 323
+ AC G + GK
Sbjct: 328 TIRACGQSGDLQVGK 342
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 13/367 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ + V + +NT+I YA+ S+KLF +M+ G PD + ++
Sbjct: 273 LREARRVFSKMAVKDSV-TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIR 330
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG+ + +G VH + G + D N L+ MYA C ++ A+ VF+ +D V+
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+S+I G+ + L+ F MK+ + P+SVT V L+S + L ++ G IH +
Sbjct: 391 WNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G E ++ +G +L+++Y+KCG ++ KVF+ M ++ SW +I+
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
+ +M GL PD + IL CS L + +GK + + + + +++M
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMY 568
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
+ G +E + + M E + V + + A +G+ GK LK ++ +
Sbjct: 569 SKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGE--------GKKALKAFQDMELSG 619
Query: 410 VLAASVS 416
VL SV+
Sbjct: 620 VLPDSVA 626
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 33/252 (13%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I + ++ +EM GL PD T ++ C + G +H
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
IFK G +S+ IGN L+ MY+ C ++ VF+ M +DVV+W+++I+ F
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKK 607
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
ALK F M+L+ P+SV ++ + AC+ HS V GL + T
Sbjct: 608 ALKAFQDMELSGVLPDSVAFIAFIFACS-----------HSGMVKEGLRFFDRMKTD--- 653
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+NL E ++ + ++ LA +G A M +KPD+
Sbjct: 654 --------------YNL--EPRMEHYACVVDLLARSGLLAQAEEFILSM---PMKPDASL 694
Query: 306 FSAILSACSHLG 317
+ A+LSAC G
Sbjct: 695 WGALLSACRARG 706
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMRE 265
SL+ +S N ++HS + +GL L V L+ Y++ + VF ++
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
N+ W +I L NG A+ + +M + L+PD+ +F +++++C+ + ++ G
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG-CI 142
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
E A + + ++DM R ++ A ++ M + G C N
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 219/383 (57%), Gaps = 1/383 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ A+NT+IR + + E+ F ML+ G+ PD TY V+ AC R + G +H+
Sbjct: 296 VIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHA 355
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K GL SD GN L+ MY+ + A+ VF+ MP RDVVSW++++ + CD +
Sbjct: 356 RAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVE 415
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ F +M N +T + ++ AC++ + ++ G+ IH+ V GL D+A+ AL+
Sbjct: 416 SFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMS 475
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KCG VE A +VF M +++ +W +I GL NGRG A+ + M G++P++ +
Sbjct: 476 MYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAAT 535
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +LSAC LV+EG+ F M++ Y I PT +HY CMVD+L RAG + EA +I +
Sbjct: 536 FVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTI 595
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P+A + + L ACR H V + + + LKLEP+ YV +++ + +G W
Sbjct: 596 PLKPSAAMWGALLAACRIHCNV-EIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDV 654
Query: 426 AELMVAINQKGLNKVPGCSWVKV 448
A+L + ++G+ K PG SW+++
Sbjct: 655 AKLRKFMKERGVKKEPGRSWIEI 677
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 189/369 (51%), Gaps = 4/369 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L+ + N I + + L + S++ R LF+ + ++N +I YA
Sbjct: 49 QVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFS-NKSVVSWNVMISGYAHR 107
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ E+ LF M + L PD FT+ ++ AC ++ G +H + + GL +D +G
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA C + A+ VF+ M RD VSW+++ + ++LK +H M
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +T ++++SAC SL + G+ IH++ V + DV + TAL +MY KCG + A +V
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + +++ +W MI G D+G+ A F +M++ G+ PD +++ +LSAC+ G +
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGL 347
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK A+ + + +++M +AG +++A + MP + V + LG
Sbjct: 348 ARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTTLLG 405
Query: 380 ACRNHGQVL 388
+ QV+
Sbjct: 406 RYADCDQVV 414
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 188/369 (50%), Gaps = 4/369 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H ++ L ++T + + I + + S+ R +F+ + + ++ TL AYA++
Sbjct: 150 EIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEV-SWTTLTGAYAES 208
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
ES+K + ML+ +RP TY V+ ACG + G +H+ I + SD +
Sbjct: 209 GYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVS 268
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L +MY C A+ VFE + RDV++W++MI GFV +A FHRM +
Sbjct: 269 TALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVA 328
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T +++SAC + G+ IH+ A +GL DV G AL+ MYSK G ++ A +V
Sbjct: 329 PDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQV 388
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M ++++ SWT ++ AD + + + F +M+Q G+K + I++ +L ACS+ +
Sbjct: 389 FDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVAL 448
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK E+ + + + ++ M + G +E+A + M + V + +G
Sbjct: 449 KWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLIG 506
Query: 380 ACRNHGQVL 388
+G+ L
Sbjct: 507 GLGQNGRGL 515
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 131/231 (56%)
Query: 94 KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
+ G + D++ Y ++++C + + +G VH I + G+ + YI NTLL++YA C ++
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A+ +F++ + VVSW+ MI+G+ +A +F M+ P+ T VS++SAC+
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
S + G IH + GL D +G AL+ MY+KCG V A +VF+ M ++ SWT
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+ A++G G ++ + M+Q ++P I++ +LSAC L +++GK
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQ 251
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 251/435 (57%), Gaps = 12/435 (2%)
Query: 22 LHTLFLKTSLDHNTCI-ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H LK DH+ + I+ L + S + + LF +P T L ++ +I YA++
Sbjct: 259 VHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTD-LIPWSLMIARYAQSD 317
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
S E++ LF M +T + P+NFT+ V++AC + + +G +HS + K GL+S+ ++ N
Sbjct: 318 RSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSN 377
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
++ +YA C EI+ + +FEE+P R+ V+W+++I G+V A+ +F M + P
Sbjct: 378 AIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQP 437
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
VT S++ A SL + G IHS + D + +L++MY+KCG + A F
Sbjct: 438 TEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTF 497
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ M +++ SW MI G + +G A++LF M T KP+ ++F +LSACS+ GL+
Sbjct: 498 DKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLY 557
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G+ +F+ M++ Y+IKP +EHY CMV +LGR G +EA +I + +P+ ++ R+ LGA
Sbjct: 558 KGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGA 617
Query: 381 CRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
C H +V +LG++ +L++EP A +VL +++ + +G WD A + + +K
Sbjct: 618 CVIHKKV-----DLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKK 672
Query: 437 LNKVPGCSWVKVNDG 451
+ K PG SWV+ N G
Sbjct: 673 VRKEPGLSWVE-NQG 686
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 167/305 (54%), Gaps = 2/305 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+++ + ++ ++ YA+ ES++LF++M G +P+NFT +K+C
Sbjct: 191 RHVFDDI-CCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLG 249
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+G SVH K D D ++G LL +YA EI A+ +FEEMP D++ WS M
Sbjct: 250 LEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLM 309
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA + D +AL +F RM+ + PN+ T S++ AC S +++ G+ IHS + GL
Sbjct: 310 IARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGL 369
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+V + A++++Y+KCG +E + K+F + ++N +W +I G G G A++LF
Sbjct: 370 NSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTH 429
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M++ ++P +++S++L A + L ++ G + K T+ ++DM + G
Sbjct: 430 MLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV-ANSLIDMYAKCG 488
Query: 354 LIEEA 358
I +A
Sbjct: 489 RINDA 493
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 187/352 (53%), Gaps = 10/352 (2%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIR 74
HLH H L TSLD + ++ IL + + SL LF+ +P T + ++ TL +
Sbjct: 56 HLH-CHILKRGTSLD----LFAQNILLNFYVQSNSLQDASKLFDEMPQTNTI-SFVTLAQ 109
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y++ +++ + K G + F + ++K L + ++H+ ++K+G +
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHA 169
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D ++G L+ Y+ +DVA+ VF+++ +D+VSW+ M+A + ++L++F++M+
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ PN+ T+ + +C L G+S+H A+ + D+ +G AL+E+Y+K G +
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A ++F M + +L W++MI+ A + R A+ LF +M QT + P++ +F+++L AC+
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+D GK + + + + + ++D+ + G IE + + +P
Sbjct: 350 SSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H I K G D + N LL Y + A +F+EMP + +S+ ++ G+
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
AL R+ N +L+ S+ ++H+ G D +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
GTAL++ YS G+V+ A VF+ + K++ SWT M++ A+N ++ LF +M G
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 300 KPDSISFSAILSACSHLGLVDEGKN 324
KP++ + S L +C L + GK+
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKS 258
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 258/453 (56%), Gaps = 24/453 (5%)
Query: 20 HQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
QLH+L L+ L+ ++C+ + + + SLH R +FN +P + A+ L+
Sbjct: 275 QQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSG 333
Query: 76 YAKTSCSIESIK-LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + + LF +ML G+RP++ TY ++KAC G +H+ K L
Sbjct: 334 YVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLAD 393
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH--R 192
+GN L+ MYA I+ A+ F+++ +++VS+S + G D S+ + + R
Sbjct: 394 LNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG----DGRSNTYQDYQIER 449
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+L ++ T SL+SA S+ + G+ +H+ ++ G D A+G +LV MYS+CG+
Sbjct: 450 MELG---ISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGY 506
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+ A +VF+ M + N+ SWT MISGLA +G A+ LF MI G+KP+ +++ A+LSA
Sbjct: 507 LVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSA 566
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH GLV EGK +F M + + + P MEHY CMVD+LGR+GL+E+A I MP + +A+
Sbjct: 567 CSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDAL 626
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+ ++ LGAC+ H + ++G++ +++LEP+ A YVL +++ + +G WD A +
Sbjct: 627 VWKTLLGACKTHNNM-----DIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARI 681
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+ K L K G SW+ V++ E + +T+
Sbjct: 682 RSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTS 714
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 193/375 (51%), Gaps = 14/375 (3%)
Query: 54 RSLFNNLPVT-PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
RS+F+ +PV L ++ + ++ E+++LF E L+ GL P+ FT +AC
Sbjct: 104 RSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACF 163
Query: 113 RCLLIGI-GGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
L + GG+V L+FK+G +D +G L+ M+A ++ + VF+ + R VV W
Sbjct: 164 ASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVW 223
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+ +I + +A+++F M P+ TL S++SACT L + R G+ +HS A+
Sbjct: 224 TLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALR 283
Query: 231 NGLELDVALGTALVEMYSKCGH---VEKAFKVFNLMREKNLQSWTIMISGLADNG-RGNY 286
GLE D + LV+MY+K + + A +VFN M + N+ +WT ++SG G + N
Sbjct: 284 LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQ 343
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
+ LF KM+ G++P+ I++S++L AC++LG D G+ + N+ +V
Sbjct: 344 VMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKS-NLADLNVVGNALV 402
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV-LYLDDNLGKLLLKLEP-E 404
M +G IEEA H + E N V SF G G+ Y D + ++ L +
Sbjct: 403 SMYAESGSIEEARHAFDQL-YEKNMV---SFSGNLDGDGRSNTYQDYQIERMELGISTFT 458
Query: 405 LGANYVLAASVSSLS 419
G+ AASV L+
Sbjct: 459 FGSLISAAASVGMLT 473
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 117 IGIGGSVHSLIFKVG--LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RDVVSWSS 172
I +G ++ + + G L++D + N+LL +Y+ C + A++VF+ MPV RD+VSW++
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC--TSLINVRAGESIHSYAVV 230
M + + ++AL++F PN+ TL + AC + L ++ G + +
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
DV++G AL++M++K G + +VF+ + E+ + WT++I+ A +G + A+ L
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLG 317
F M++ G +PD + S++LSAC+ LG
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELG 269
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 254/440 (57%), Gaps = 5/440 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
+ V ++H +KT + +R I L + L R +F+ + + ++ +
Sbjct: 24 RAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR-ERNVVSWTAM 82
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I Y++ + E++ LF +ML++ P+ FT+ V+ +C +G +HS IFK
Sbjct: 83 ISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNY 142
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
++ ++G++LL MYA I A+ VFE +P RDVVS +++I+G+ +AL++F R
Sbjct: 143 ENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCR 202
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
++ S N VT SL++A + L + G+ +HS+ + L V L +L++MYSKCG+
Sbjct: 203 LQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGN 262
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILS 311
+ A K+FN M + + SW M+ G + +G+G + LF M + +KPDS++F A+LS
Sbjct: 263 LNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLS 322
Query: 312 ACSHLGLVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
CSH GL D+G FDEM + I+ +EHYGC++D+LGRAG +EEA+ +I+ MP EP
Sbjct: 323 GCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPT 382
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
A I S LGACR H + + +G LL++EPE NYV+ +++ + +G W+ +
Sbjct: 383 AAIWGSLLGACRVHSNT-NIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRE 441
Query: 431 AINQKGLNKVPGCSWVKVND 450
+ +K + K PG SW++++
Sbjct: 442 LMMEKAVIKEPGRSWIELDQ 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 138/264 (52%), Gaps = 1/264 (0%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++ C + G VH+ + K Y+ L+ +Y C+ + A+ VF+EM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R+VVSW++MI+G+ S+AL +F +M ++ PN T +++S+CT G
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IHS+ E + +G++L++MY+K G + +A VF + E+++ S T +ISG A G
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF ++ + G+ + ++++++L+A S L +D GK + R + +
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRC-ELPFYVVLQN 251
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPT 367
++DM + G + A I NMP
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPV 275
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 223/383 (58%), Gaps = 1/383 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NTLI A+ E++ + EM + G PD FT V+ C I G VH
Sbjct: 454 SWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYA 513
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G D+D ++G++L+ MYA C ++D + VF+ D V W+SM+AG+ S +AL
Sbjct: 514 IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL 573
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F RM A P VT SL+ A +L +R G+ +H+Y + ++ + ++L++MY
Sbjct: 574 GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY 633
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG+V+ A +VFN ++ ++ SWT MI G A +G A LF +M +KP+ I+F
Sbjct: 634 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFL 693
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
A+L+ACSH GLVD G YF+ M+ Y P++EH + D LGRAG ++EAY+ I M
Sbjct: 694 AVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKI 753
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P + + + L ACR H + L + + K + +LEP+ ++V+ +++ S SG W+ AA+
Sbjct: 754 KPTSSVWSTLLRACRVHKNTV-LAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQ 812
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
L ++ KG+ K P CSW++V +
Sbjct: 813 LRKSMRIKGMKKEPACSWIEVKN 835
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 32/173 (18%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSA---CTSLINVRAGESIHSYAVVNGLELDVALGTA 242
A+ +F +M+ A+ +P S SL +A C L S+H+ A+ +G D A
Sbjct: 348 AISLFLQMR-ASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 406
Query: 243 LVEMYSKC---------------GHVEKAF-----KVFNLMREKNLQSWTIMISGLADNG 282
L+ + K G +E A KVF+ M E++ SW +I G A++
Sbjct: 407 LLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHK 466
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAIL---SACSHL--GLVDEG---KNYFD 327
R A+S+ +M + G PD+ + S +L + C+ + G+V G KN FD
Sbjct: 467 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD 519
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPL 66
+L++L K QLH ++ + N I S I + ++ R +FN + +P +
Sbjct: 602 SLLRLGK------QLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGI-QSPDI 654
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++ +I YA + E+ LF+ M ++P++ T+ V+ AC L+ G +
Sbjct: 655 VSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNS 714
Query: 127 I-----FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS-WSSMI 174
+ F L+ + +TL R ++D A EM ++ S WS+++
Sbjct: 715 MSNQYGFVPSLEHCAALADTLGR----AGDLDEAYNFISEMKIKPTSSVWSTLL 764
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 228/394 (57%), Gaps = 7/394 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P + ++ T+I AY+ + +++L M + G+ P+ FT+ V++AC R
Sbjct: 342 LFDKMP-ERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLY 400
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +HS I KVGL+SD ++ + L+ +Y+ E+ A VF EM D V W+S+IA
Sbjct: 401 DLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIA 457
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
F +AL ++ M+ + TL S++ ACTSL + G H + + +
Sbjct: 458 AFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL--KFDQ 515
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ L AL++MY KCG +E A +FN M +K++ SW+ MI+GLA NG A++LF M
Sbjct: 516 DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMK 575
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
G KP+ I+ +L ACSH GLV+EG YF M +Y I P EHYGCM+D+LGRA +
Sbjct: 576 VQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKL 635
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
++ +I M EP+ V R+ L ACR Q + L K +LKL+P+ YVL +++
Sbjct: 636 DDMVKLIHEMNCEPDVVTWRTLLDACRAR-QNVDLATYAAKEILKLDPQDTGAYVLLSNI 694
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++S W+ AE+ + ++G+ K PGCSW++VN
Sbjct: 695 YAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVN 728
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
++ + D M + G+ D+ TY ++K C + G VH IF G ++ N L+
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MY ++ A+ +F++MP R+VVSW++MI+ + A+++ M PN T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
S++ AC L +++ +HS+ + GLE DV + +AL+++YSK G + +A KVF M
Sbjct: 389 FSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+ W +I+ A + G+ A+ L+ M + G D + +++L AC+ L L++ G+
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505
Query: 325 YFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNM 365
A V+ +K + ++DM + G +E+A I M
Sbjct: 506 -----AHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRM 543
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
D PS A+ V M+ +S+T L+ C + VR G+ +H + NG L
Sbjct: 265 DLPS-AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLT 323
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
L+ MY K +E+A +F+ M E+N+ SWT MIS ++ + A+ L A M + G+
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ +FS++L AC L + + ++ ++ ++ + ++D+ + G + EA
Sbjct: 384 PNMFTFSSVLRACERLYDLKQLHSWIMKVG----LESDVFVRSALIDVYSKMGELLEALK 439
Query: 361 IIRNMPTEPNAVILRSFLGACRNH 384
+ R M T ++V+ S + A H
Sbjct: 440 VFREMMT-GDSVVWNSIIAAFAQH 462
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 231/402 (57%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R++F++L + ++ +I A +++I+LF +M G RP T+ ++
Sbjct: 582 SLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSIL 640
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
K C + G V + I G + D +GN L+ Y+ + A+ VF++MP RD+V
Sbjct: 641 KVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIV 700
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ +IAG+ A++ ++M+ + PN + VSL++AC+S + G+ +H+
Sbjct: 701 SWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEI 760
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V L+ DV +G AL+ MY+KCG +A +VF+ + EKN+ +W MI+ A +G + A+
Sbjct: 761 VKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKAL 820
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
F M + G+KPD +F++ILSAC+H GLV EG F M Y + PT+EHYGC+V +
Sbjct: 821 GFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGL 880
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRA +EA +I MP P+A + + LGACR HG + L ++ LKL A
Sbjct: 881 LGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIA-LAEHAANNALKLNARNPAV 939
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L ++V + +G WD A++ + +G+ K PG SW++V++
Sbjct: 940 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDN 981
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 149/270 (55%), Gaps = 1/270 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF +P L ++N +I YA+ E+++L+ +M G++P T+ ++ AC
Sbjct: 385 RELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G +H I + G+ S+ ++ N L+ MY C + A+ VFE RDV+SW+SM
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM 503
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG S A K+F M+ P+++T S++S C + + G+ IH +GL
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGL 563
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+LDV LG AL+ MY +CG ++ A VF+ ++ +++ SWT MI G AD G AI LF +
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGK 323
M G +P +FS+IL C+ +DEGK
Sbjct: 624 MQNEGFRPVKSTFSSILKVCTSSACLDEGK 653
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N++I +A+ + KLF EM L PDN T+ V+ C + +G +H
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I + GL D +GN L+ MY C + A+ VF + RDV+SW++MI G
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+++F +M+ P T S++ CTS + G+ + +Y + +G ELD +G AL+
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
YSK G + A +VF+ M +++ SW +I+G A NG G A+ +M + + P+ S
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFS 736
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F ++L+ACS ++EGK E+ + ++ + ++ M + G EA + N+
Sbjct: 737 FVSLLNACSSFSALEEGKRVHAEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795
Query: 366 PTEPNAVILRSFLGACRNHG 385
E N V + + A HG
Sbjct: 796 -IEKNVVTWNAMINAYAQHG 814
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 193/406 (47%), Gaps = 58/406 (14%)
Query: 59 NLPVTPPLFA---------YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+LP +FA YNT++ YA+ + E + LF +M G+ PD TY ++
Sbjct: 178 DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
A ++ G +H L + GL+SD +G L+ M C ++D AK F+ RDVV
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVV 297
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
++++IA +A + ++RM+ + N T +S+++AC++ + AG+ IHS+
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G DV +G AL+ MY++CG + KA ++F M +++L SW +I+G A A+
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
L+ +M G+KP ++F +LSAC++ +GK +++ R IK +++M
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMY 476
Query: 350 GRAGLIEEAYHI----------------------------------IRNMPTEPNAVILR 375
R G + EA ++ ++N EP+ +
Sbjct: 477 RRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFA 536
Query: 376 SFLGACRN----------HGQV----LYLDDNLGKLLLKLEPELGA 407
S L C+N HG++ L LD NLG L+ + G+
Sbjct: 537 SVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 171/318 (53%), Gaps = 2/318 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN LI A A+ ++E+ + + M G+ + TY ++ AC + G +HS I
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ G SD IGN L+ MYA C ++ A+ +F MP RD++SW+++IAG+ + +A++
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+ P VT + L+SAC + G+ IH + +G++ + L AL+ MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +A VF + +++ SW MI+G A +G A LF +M L+PD+I+F++
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LS C + ++ GK + ++ + +++M R G +++A ++ ++
Sbjct: 538 VLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QH 595
Query: 369 PNAVILRSFLGACRNHGQ 386
+ + + +G C + G+
Sbjct: 596 RDVMSWTAMIGGCADQGE 613
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 162/326 (49%), Gaps = 12/326 (3%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+F +P + ++N+LI YA+ ++ +LF+EM G P+ TY ++ AC
Sbjct: 83 QVFKEMP-RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +HS I K G D + N+LL MY C ++ A+ VF + RDVVS+++M+
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+ + L +F +M SP+ VT ++L+ A T+ + G+ IH V GL
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ +GTALV M +CG V+ A + F ++++ + +I+ LA +G A + +M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCMVDMLGR 351
G+ + ++ +IL+ACS ++ GK ++ E +++ ++ M R
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG----NALISMYAR 377
Query: 352 AGLIEEAYHIIRNMPTEP----NAVI 373
G + +A + MP NA+I
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAII 403
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 2/284 (0%)
Query: 103 TYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
TY +++ C R L+ +H+ + + + D ++ N L+ MY C+ + A VF+EM
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P RDV+SW+S+I+ + A ++F M+ A PN +T +S+++AC S + G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
IHS + G + D + +L+ MY KCG + +A +VF + +++ S+ M+ A
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
+ LF +M G+ PD +++ +L A + ++DEGK ++ + +
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSDIRVG 267
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+V M R G ++ A + + + V+ + + A HG
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGT-ADRDVVVYNALIAALAQHGH 310
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 219/376 (58%), Gaps = 1/376 (0%)
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y+K E++ ++ EML + P NF + +KAC + +G VH+ + K
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D+ + N LLR+Y C+ + VF++MP R+V SW+S+I+GFV D +AL VF RM+
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ VTL +++ C + + +G+ IH+ V + DV + +LV+MY KCG V+
Sbjct: 124 REGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVD 183
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
++F+ MR K+L SW M++G A NG A+ LF +M G++PD ++F A+LS CS
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GL ++G+ F M + + P++EHY C+VDMLGRAG I+ A +++NMP + + I
Sbjct: 244 HAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIW 303
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S L +CR H +V L + + L +LEP NYV+ +++ + +G WD+ + +
Sbjct: 304 GSLLNSCRLHNEVP-LAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQT 362
Query: 435 KGLNKVPGCSWVKVND 450
+ + K GCSW++V +
Sbjct: 363 RRIRKEAGCSWIQVKN 378
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P + ++N+LI + K E++ +F M + G+ T ++ C R
Sbjct: 87 VFDQMP-ERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVT 145
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H+ I K D + N+L+ MY C +D + +F+ M +D+ SW++M+
Sbjct: 146 ALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLT 205
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ A+ +F+ M P+ VT ++L+S C+ AG + + + +E+
Sbjct: 206 GYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS-----HAGLTEDGQKLFHRMEM 260
Query: 236 DVALGTA------LVEMYSKCGHVEKAFKVFNLMREK 266
D + + LV+M + G ++ A V M K
Sbjct: 261 DFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMK 297
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +K++ + +++ + + + + R LF+ + + L ++NT++ YA
Sbjct: 152 EIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMR-SKDLTSWNTMLTGYAIN 210
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV-HSLIFKVGLDSDKYI 138
++ LF+EM G+RPD+ T+ ++ C L G + H + G+
Sbjct: 211 GYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEH 270
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVS-WSSMI 174
L+ M ID A V + MP++ S W S++
Sbjct: 271 YACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLL 307
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 227/401 (56%), Gaps = 10/401 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+LF + + + T++ + E++ +F M G+ D +T+ ++ ACG
Sbjct: 231 RALFEAIEERDSI-TWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGA 289
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H+ I + + + ++G+ L+ MY+ C+ + +A+AVF M ++++SW++M
Sbjct: 290 LAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAM 349
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+ +A++VF M+ P+ TL S++S+C +L ++ G H A+V+GL
Sbjct: 350 IVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 409
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
V + ALV +Y KCG +E A ++F+ M + SWT ++ G A G+ I LF K
Sbjct: 410 RPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEK 469
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M+ G+KPD ++F +LSACS GLVD+G++YF M + ++I P +HY CM+D+ R+G
Sbjct: 470 MLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSG 529
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+++A I+ MP P+A + L ACR G D +GK LLKL+P+ A+Y
Sbjct: 530 WLKQAEEFIKQMPRCPDAFGWATLLSACRLRG-----DMEIGKWAAENLLKLDPQNPASY 584
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL S+ + G W+ A+L + + + K PGCSW+K +
Sbjct: 585 VLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKN 625
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 191/412 (46%), Gaps = 36/412 (8%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK--TGLRPDNFTYPFVVKACGR 113
LF +LP + +YN L+ +++ + + +L+ G+RP T VV
Sbjct: 99 LFTSLPQRDAV-SYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASA 157
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA------------------------- 148
+G VH I ++G + + G+ L+ MYA
Sbjct: 158 LGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTM 217
Query: 149 ------CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
CK + A+A+FE + RD ++W++M+ G S+AL VF RM+ +
Sbjct: 218 ITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQ 277
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T S+++AC +L + G+ IH+Y E +V +G+ALV+MYSKC V A VF
Sbjct: 278 YTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRR 337
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M KN+ SWT MI G NG G A+ +F++M + G+KPD + +++S+C++L ++EG
Sbjct: 338 MMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEG 397
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
F +A V ++P + +V + G+ G IE+A+ + M + V + +
Sbjct: 398 AQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVMGYA 455
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
G+ D K+L K G ++ S S SG D ++ Q
Sbjct: 456 QFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 74/303 (24%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+ LP P + NTL+ AYA + + ++FD M GR L
Sbjct: 36 ILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMP------------------GRNL 77
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G N+LL A + + +F +P RD VS+++++A
Sbjct: 78 VTG---------------------NSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLA 116
Query: 176 GFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
GF + + A + + L +E+ P+ +T+ +V ++L + G +H + G
Sbjct: 117 GFSRAGAHARAAGAYVAL-LRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLG 175
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ----------------------- 269
G+ LV+MY+K G + A +VF+ M KN+
Sbjct: 176 FGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFE 235
Query: 270 --------SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+WT M++GL NG + A+ +F +M G+ D +F +IL+AC L ++E
Sbjct: 236 AIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEE 295
Query: 322 GKN 324
GK
Sbjct: 296 GKQ 298
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 241/432 (55%), Gaps = 3/432 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H L +K+ N C+ + + + +L LF+ + + ++N +I A +
Sbjct: 403 RQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAV-SWNAIIAACEQ 461
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E++ F M+ + + PD+FTY V+KAC + G +H+ I K G+ D ++
Sbjct: 462 NGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFV 521
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G L+ MY C I+ A + + + +VSW+++I+GF DA K F RM
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV 581
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P++ T +++ C +L V G+ IH+ + L+ DV + + LV+MYSKCG+++ +
Sbjct: 582 NPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQL 641
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F ++ +W M+ G A +G G A+ LF M +KP+ +F ++L AC+H+GL
Sbjct: 642 MFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGL 701
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VD+G +YFD M Y + P EHY CMVD+LGR+G I+EA ++++ MP E +AVI R+ L
Sbjct: 702 VDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLL 761
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
C+ HG V + + + LL+L+P+ + VL +++ + +G W +E+ + L
Sbjct: 762 SVCKIHGNV-EVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLK 820
Query: 439 KVPGCSWVKVND 450
K PGCSW+++ D
Sbjct: 821 KEPGCSWIELKD 832
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 190/361 (52%), Gaps = 7/361 (1%)
Query: 25 LFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE 84
++L+ + +N+ IIS + + R F +P + ++N++I + + +
Sbjct: 110 MYLRDVVSYNS-IISGYASCG---EMDIARKFFYEMP-ERDVVSWNSVISGFLQNGECRK 164
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
SI +F EM + G+ D + V+KACG +G VH L+ K G D D G+ LL
Sbjct: 165 SIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLG 224
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MYA CK +D + +VF E+P ++ VSWS+MIAG V D + L++F M+ +
Sbjct: 225 MYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSI 284
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
SL +C +L +R G+ +HS+A+ + D+ +GTA ++MY+KCG + A KV + M
Sbjct: 285 YASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP 344
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+ +LQS+ +I G A + RG A+ F +++TGL D I+ S L+AC+ + EG+
Sbjct: 345 KCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQ 404
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+ ++ + ++DM G+ + EA + +M +AV + + AC +
Sbjct: 405 VHGLAVKSISMS-NICVANAILDMYGKCKALAEASDLF-DMMERRDAVSWNAIIAACEQN 462
Query: 385 G 385
G
Sbjct: 463 G 463
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 14/338 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +YN +I YA++ +++K F +LKTGL D T + AC G VH
Sbjct: 348 LQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG 407
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K S+ + N +L MY CK + A +F+ M RD VSW+++IA + +
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEE 467
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L F M + P+ T S++ AC + G IH+ + +G+ D +G ALV+
Sbjct: 468 TLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVD 527
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY KCG +EKA K+ + +K + SW +ISG + + A F++M++ G+ PD+ +
Sbjct: 528 MYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFT 587
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC--MVDMLGRAGLIEEAYHIIR 363
++A+L C++L V GK A++ + + Y C +VDM + G ++++ +
Sbjct: 588 YAAVLDTCANLATVGLGKQIH---AQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
P + V + L +HG LG+ LKL
Sbjct: 645 KAPNR-DFVTWNAMLCGYAHHG--------LGEEALKL 673
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 7/344 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L +K D + S + + + L + S+F+ LP +++ +I +
Sbjct: 202 QVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELP-EKNWVSWSAMIAGCVQN 260
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++E ++LF EM G+ Y + ++C + +G +HS K SD +G
Sbjct: 261 DRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVG 320
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L MYA C + A+ V MP + S++++I G+ D ALK F +
Sbjct: 321 TATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG 380
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ +TL ++AC S+ G +H AV + ++ + A+++MY KC + +A +
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F++M ++ SW +I+ NG ++ FA MI + ++PD ++ ++L AC+ +
Sbjct: 441 FDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQAL 500
Query: 320 DEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHI 361
+ G + R+ + + +VDM + G+IE+A I
Sbjct: 501 NTG---MEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKI 541
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 52/357 (14%)
Query: 41 FILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPD 100
++LT L S H LF +P P ++TL + + I
Sbjct: 9 WLLTRLFFSYHAI-PLFKKIPPIPT-NNFSTLAQNQTQPPAKIR---------------- 50
Query: 101 NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE 160
T+ + + C + + G H+ + G + ++ N L++MY C +D A VF+
Sbjct: 51 --TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFD 108
Query: 161 EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN-ESPNSV---------------- 203
+M +RDVVS++S+I+G+ +C A K F+ M + S NSV
Sbjct: 109 KMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDV 168
Query: 204 --------------TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
+L ++ AC +L G +H V G + DV G+AL+ MY+K
Sbjct: 169 FLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAK 228
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
C ++ + VF+ + EKN SW+ MI+G N R + LF +M G+ ++++
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+C+ L + GK + + + DM + G + +A ++ +MP
Sbjct: 289 FRSCAALSALRLGKELHSHALKSAFGSDIIVGTATL-DMYAKCGRMADAQKVLSSMP 344
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 234/428 (54%), Gaps = 35/428 (8%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
R LF +P + ++ T+I Y + E+++++ ML+TG+ P+ ++ AC
Sbjct: 268 LARDLFERIPAKD-VVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISAC 326
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
GR + + G H +I + G D +I T++ YAAC EI++A FE V SW+
Sbjct: 327 GRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWN 386
Query: 172 SMIAGFV-------------------------------ACDSPSDALKVFHRMKLANESP 200
++I+GFV + P AL++FH M P
Sbjct: 387 ALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQP 446
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +T+VS+ SA +L + G H Y + N + L+ L AL++MY+KCG + A ++F
Sbjct: 447 NEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLF 506
Query: 261 NLMREK--NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
++++ ++ W +I GLA +G N ++ LF+++ + +KP+SI+F +LSAC H GL
Sbjct: 507 YEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGL 566
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VD G+ YF M +YNI+P ++HYGCM+D+LGRAG ++EA +IR MP + + VI + L
Sbjct: 567 VDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLL 626
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR HG V + + + L KL+ GA VL +++ + +G WD A + A+ + +
Sbjct: 627 AACRTHGNV-EIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMK 685
Query: 439 KVPGCSWV 446
K PGCS V
Sbjct: 686 KSPGCSGV 693
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 173/386 (44%), Gaps = 64/386 (16%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R LF +P+ + +Y T++ A+ +C +E+I +F +M G+ P+ T V+
Sbjct: 133 SLDNARHLFEKMPIKGCV-SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVI 191
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE----------------- 151
A I +H+L FK+GL++ + L+ MY C
Sbjct: 192 SAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVV 251
Query: 152 --------------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+D+A+ +FE +P +DVVSW ++I G+V + +AL+++ M
Sbjct: 252 TWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTG 311
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH----- 252
PN V +V L+SAC + V G+ H V G + + ++ Y+ CG
Sbjct: 312 VGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAF 371
Query: 253 --------------------------VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+E+A ++F+ M E+++ SW+ MISG + N + +
Sbjct: 372 LQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDL 431
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF +M+ G++P+ I+ ++ SA + LG + EG+ + E +I ++
Sbjct: 432 ALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGR-WAHEYILSNSIPLNDNLNAALI 490
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAV 372
DM + G I A + + ++V
Sbjct: 491 DMYAKCGSITIALQLFYEIQDRVSSV 516
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 92/351 (26%)
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI--------------- 152
+K+C L + G +HSL+FK GL S+ ++ N+L+ Y C+ I
Sbjct: 59 LKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDP 118
Query: 153 ----------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
D A+ +FE+MP++ VS+++M+ G + +A+ VF M+ A
Sbjct: 119 VSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA 178
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
PN VTL S++SA + + + +H+ + GLE + T LV MY C + A
Sbjct: 179 GVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNA 238
Query: 257 FKVFNLMREKNLQSWTIMISGLADNG-------------------------------RGN 285
+F+ + E+N+ +W +M++G + +G R
Sbjct: 239 RVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLG 298
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV----YN-IKPTME 340
A+ ++ M++TG+ P+ + ++SAC V EG+ + + R Y+ I+ T+
Sbjct: 299 EALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATII 358
Query: 341 HY-------------------------GCMVDMLGRAGLIEEAYHIIRNMP 366
H+ ++ R G+IE+A + MP
Sbjct: 359 HFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP 409
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 32/167 (19%)
Query: 183 PSDALKVF-HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
P D L+ F + K S +TLVS + +C+SL+ + G+ IHS +GL ++ +
Sbjct: 32 PIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKN 91
Query: 242 ALVEMYSKC-------------------------------GHVEKAFKVFNLMREKNLQS 270
+L+ Y KC G ++ A +F M K S
Sbjct: 92 SLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVS 151
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+T M+ GLA N AI +F M G+ P+ ++ ++++SA SH+G
Sbjct: 152 YTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVG 198
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +KT + + + I + S L R + L + ++ ++I Y +
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQH 424
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C +++ F EM K G+ PDN + C + G +H+ I+ G D I
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +YA C I A + FEE+ +D ++W+ +++GF +ALKVF RM +
Sbjct: 485 NALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T VS +SA +L ++ G+ IH+ + G + +G AL+ +Y KCG E A
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M E+N SW +I+ + +GRG A+ LF +M + G+KP+ ++F +L+ACSH+GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M+ Y I+P +HY C++D+ GRAG ++ A I MP +A++ R+ L
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + + + K LL+LEP A+YVL ++ +++ W ++ + +G+ K
Sbjct: 725 ACKVHKNI-EVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 784 EPGRSWIEVKN 794
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 176/322 (54%), Gaps = 6/322 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ A+ + + +S +LF +M G+RP+ FTYP +++ C I +G +HSL
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +SD Y+ L+ MY+ ++ A+ V E + +DVVSW+SMIAG+V + DAL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M+ P+++ L S +S C + +R G IH+ V+G DV++ ALV +Y+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +AF F + K+ +W ++SG A +G A+ +F +M Q+G+K + +F +
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMP 366
LSA ++L + +GK ARV + E ++ + G+ G E+A M
Sbjct: 553 ALSASANLAEIKQGKQIH---ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM- 608
Query: 367 TEPNAVILRSFLGACRNHGQVL 388
+E N V + + +C HG+ L
Sbjct: 609 SERNEVSWNTIITSCSQHGRGL 630
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S +F ++P + +NTLI +A+ ++++F+EM +GL PD T ++
Sbjct: 193 SFRLAERVFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +HS +FK G+ SD + +LL +Y C +++ A +F +VV
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+ M+ F + + + ++F +M+ A PN T ++ CT + GE IHS +
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V G E D+ + L++MYSK G +EKA +V +++EK++ SWT MI+G + A+
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY--NIKPTMEHYGCMV 346
+ F +M + G+ PD+I ++ +S C+ + + +G AR+Y + + +V
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGYSGDVSIWNALV 488
Query: 347 DMLGRAGLIEEAY 359
++ R G I EA+
Sbjct: 489 NLYARCGRIREAF 501
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 167/332 (50%), Gaps = 3/332 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F L + ++ ++ YA+ E++ L+ +M + G+ P + V+ +C
Sbjct: 96 ARRVFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCT 154
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ L G +H+ +K G S+ ++GN ++ +Y C +A+ VF +MP RD V++++
Sbjct: 155 KAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNT 214
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I+G C AL++F M+ + SP+ VT+ SL++AC SL +++ G +HSY G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ D + +L+++Y KCG VE A +FN N+ W +M+ + LF
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M G++P+ ++ IL C+ +D G+ ++ + M G ++DM +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
G +E+A ++ M E + V S + H
Sbjct: 394 GWLEKARRVL-EMLKEKDVVSWTSMIAGYVQH 424
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 96 GLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
GL P +F ++AC G + +H+ GL + +GN L+ +Y+ +
Sbjct: 38 GLGPLDFA--CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ VFEE+ RD VSW +M++G+ +AL ++ +M A P L S++S+CT
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
G IH+ +G ++ +G A++ +Y +CG A +VF M ++ ++ +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A G G +A+ +F +M +GL PD ++ S++L+AC+ LG + +G + +
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-G 274
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
I G ++D+ + G +E A +I N N V+
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVL 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
M R S +AGF+A + P+ L +F + + + AC N R
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG--NGRRW 58
Query: 222 E---SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ IH+ AV GL +G L+++YSK G V A +VF + ++ SW M+SG
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
A NG G A+ L+ +M + G+ P S++LS+C+ L +G+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +KT + + + I + S L R + L + ++ ++I Y +
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQH 424
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C +++ F EM K G+ PDN + C + G +H+ I+ G D I
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +YA C I A + FEE+ +D ++W+ +++GF +ALKVF RM +
Sbjct: 485 NALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T VS +SA +L ++ G+ IH+ + G + +G AL+ +Y KCG E A
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M E+N SW +I+ + +GRG A+ LF +M + G+KP+ ++F +L+ACSH+GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M+ Y I+P +HY C++D+ GRAG ++ A I MP +A++ R+ L
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + + + K LL+LEP A+YVL ++ +++ W ++ + +G+ K
Sbjct: 725 ACKVHKNI-EVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 784 EPGRSWIEVKN 794
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 176/322 (54%), Gaps = 6/322 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ A+ + + +S +LF +M G+RP+ FTYP +++ C I +G +HSL
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +SD Y+ L+ MY+ ++ A+ V E + +DVVSW+SMIAG+V + DAL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M+ P+++ L S +S C + +R G IH+ V+G DV++ ALV +Y+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +AF F + K+ +W ++SG A +G A+ +F +M Q+G+K + +F +
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMP 366
LSA ++L + +GK ARV + E ++ + G+ G E+A M
Sbjct: 553 ALSASANLAEIKQGKQIH---ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM- 608
Query: 367 TEPNAVILRSFLGACRNHGQVL 388
+E N V + + +C HG+ L
Sbjct: 609 SERNEVSWNTIITSCSQHGRGL 630
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S +F ++P + +NTLI +A+ ++++F+EM +GL PD T ++
Sbjct: 193 SFRLAERVFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +HS +FK G+ SD + +LL +Y C +++ A +F +VV
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+ M+ F + + + ++F +M+ A PN T ++ CT + GE IHS +
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V G E D+ + L++MYSK G +EKA +V +++EK++ SWT MI+G + A+
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY--NIKPTMEHYGCMV 346
+ F +M + G+ PD+I ++ +S C+ + + +G AR+Y + + +V
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGYSGDVSIWNALV 488
Query: 347 DMLGRAGLIEEAY 359
++ R G I EA+
Sbjct: 489 NLYARCGRIREAF 501
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 3/331 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F L + ++ ++ YA+ E++ L+ +M + G+ P + V+ +C +
Sbjct: 97 RRVFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L G +H+ +K G S+ ++GN ++ +Y C +A+ VF +MP RD V+++++
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G C AL++F M+ + SP+ VT+ SL++AC SL +++ G +HSY G+
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D + +L+++Y KCG VE A +FN N+ W +M+ + LF +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G++P+ ++ IL C+ +D G+ ++ + M G ++DM + G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYG 394
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+E+A ++ M E + V S + H
Sbjct: 395 WLEKARRVL-EMLKEKDVVSWTSMIAGYVQH 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 96 GLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
GL P +F ++AC G + +H+ GL + +GN L+ +Y+ +
Sbjct: 38 GLGPLDFA--CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ VFEE+ RD VSW +M++G+ +AL ++ +M A P L S++S+CT
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
G IH+ +G ++ +G A++ +Y +CG A +VF M ++ ++ +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A G G +A+ +F +M +GL PD ++ S++L+AC+ LG + +G + +
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-G 274
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
I G ++D+ + G +E A +I N N V+
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVL 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
M R S +AGF+A + P+ L +F + + + AC N R
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG--NGRRW 58
Query: 222 E---SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ IH+ AV GL +G L+++YSK G V A +VF + ++ SW M+SG
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
A NG G A+ L+ +M + G+ P S++LS+C+ L +G+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 238/396 (60%), Gaps = 11/396 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P + ++ TLI+ YA++ +E+I+LF + + L P+ FT+ V++AC
Sbjct: 95 LFDEMPERNTI-SFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATME 152
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H + K+GL SD ++ N L+ +YA C ++ + +F E P R+ V+W+++I
Sbjct: 153 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIV 212
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G V AL++F M VT S + AC SL + G IHS V +
Sbjct: 213 GHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK 272
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ + AL++MY+KCG ++ A VF+LM +++ SW MISG + +G G A+ +F KM
Sbjct: 273 DIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQ 332
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+T +KPD ++F +LSAC++ GL+D+G+ YF M + + I+P +EHY CMV +LGR G +
Sbjct: 333 ETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHL 392
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
++A +I +P +P+ ++ R+ LGAC V++ D LG++ +L++EP+ A +VL
Sbjct: 393 DKAVKLIDEIPFQPSVMVWRALLGAC-----VIHNDIELGRISAQRVLEMEPQDKATHVL 447
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+++ + + WD A + + +KG+ K PG SW++
Sbjct: 448 LSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIE 483
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 23/327 (7%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT---YPFVVKACGRCLLIGIGGSVHSL 126
N + +++ S++S KL E + + P F Y ++ C + G +H
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
I K G D + N LL MY + A +F+EMP R+ +S+ ++I G+ +A
Sbjct: 64 ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+++F R+ PN T S++ AC ++ + G IH + + GL DV + AL+++
Sbjct: 124 IELFVRLH-REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDV 182
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG +E + ++F +N +W +I G G G A+ LF M++ ++ +++
Sbjct: 183 YAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTY 242
Query: 307 SAILSACSHLGLVDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
S+ L AC+ L ++ G K FD+ V N ++DM + G I++A
Sbjct: 243 SSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN---------ALIDMYAKCGSIKDA 293
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHG 385
++ ++ + + V + + HG
Sbjct: 294 -RLVFDLMNKQDEVSWNAMISGYSMHG 319
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 210/341 (61%), Gaps = 4/341 (1%)
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
G C + +H+ + G D + +L+ YAAC + D A+ VF+EMPVRD ++W+
Sbjct: 136 GHCRALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWN 195
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
+I + DALK+F M+ P+ VT + L+ ACTSL + GE + YAV
Sbjct: 196 VLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAV 255
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G ++ + +L+ MY+KCG V+KA++VF +K++ +W+ MISGLA NG G AIS
Sbjct: 256 DHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAIS 315
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
F +M ++G+ PD +F+ +LSACSH GLVDEG +FD M Y +KP + HYGCMVD++
Sbjct: 316 AFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLM 375
Query: 350 GRAGLIEEAYH-IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAGL+++AY ++++M P+A I R+ LGACR HG + L + + L++L+ + +
Sbjct: 376 GRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHI-DLGERVINHLIELKAQQAGD 434
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
YVL + + +W AE+ + +KG+ PGC+ V++N
Sbjct: 435 YVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELN 475
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 218/386 (56%), Gaps = 9/386 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T++ + +E++ +F M G+ D +T+ ++ ACG G +H+ I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYIT 305
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + + ++G+ L+ MY+ C+ I +A+AVF M R+++SW++MI G+ +A++
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M++ P+ TL S++S+C +L ++ G H A+V+GL + + ALV +Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M + SWT +++G A G+ I LF KM+ GLKPD ++F
Sbjct: 426 KCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIG 485
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACS GLV++G +YFD M + ++I P +HY CM+D+ R+G +EA I+ MP
Sbjct: 486 VLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDT 424
P+A + L +CR G + +GK LL+ +P+ A+YVL S+ + G W
Sbjct: 546 PDAFGWATLLSSCRLRGNM-----EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTE 600
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
A L + + + K PGCSW+K +
Sbjct: 601 VAHLRRGMRDRQVKKEPGCSWIKYKN 626
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 187/398 (46%), Gaps = 37/398 (9%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRC 114
LF ++P + +YN LI ++ T S++L+ +L+ +RP T ++
Sbjct: 101 LFASMPERDAV-SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------- 148
+G SVH + ++G + ++G+ L+ MYA
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 149 -----CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
CK I+ AK +F+ M RD ++W++M+ G +AL VF RM+ +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T S+++AC +L G+ IH+Y E +V +G+ALV+MYSKC + A VF M
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+N+ SWT MI G N A+ F++M G+KPD + +++S+C++L ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
F +A V + + +V + G+ G IE+A+ + M + V + +
Sbjct: 400 Q-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQ 457
Query: 384 HGQVLYLDDNLGKLLLK-LEPELGANYVLAASVSSLSG 420
G+ D K+L+ L+P+ G ++ S S +G
Sbjct: 458 FGKAKETIDLFEKMLVNGLKPD-GVTFIGVLSACSRAG 494
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 142/335 (42%), Gaps = 74/335 (22%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
PP F N L+ AYAK+ + ++FDEM P+ FT
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEMPD----PNLFTR------------------- 82
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
N LL A + + + +F MP RD VS++++I GF + SP
Sbjct: 83 ----------------NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSP 126
Query: 184 SDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ +++++ R L ES P +TL +++ ++L + G S+H + G +G+
Sbjct: 127 ARSVQLY-RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGS 185
Query: 242 ALVEMYSK-------------------------------CGHVEKAFKVFNLMREKNLQS 270
LV+MY+K C +E A +F LM +++ +
Sbjct: 186 PLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSIT 245
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
WT M++GL NG A+ +F +M G+ D +F +IL+AC L +EGK +
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYIT 305
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R + + + +VDM + I A + R M
Sbjct: 306 RTW-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 56/254 (22%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ L+ YA+ + E+I LF++ML GL+PD T+ V+ AC R L+ G
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG------- 499
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
C D + + +P+ D ++ MI + +A
Sbjct: 500 ---------------------CDYFDSMQKDHDIVPIDD--HYTCMIDLYSRSGRFKEAE 536
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD---VALGTALV 244
+ +M SP++ +L+S+C +R I +A N LE D A L
Sbjct: 537 EFIKQMP---HSPDAFGWATLLSSC----RLRGNMEIGKWAAENLLETDPQNPASYVLLC 589
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQ-----SWTIMISGL----ADNGRGNYAISLF---- 291
M++ G + + MR++ ++ SW + + AD+ ++ ++
Sbjct: 590 SMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Query: 292 ---AKMIQTGLKPD 302
+KM + G KPD
Sbjct: 650 WLNSKMAEEGYKPD 663
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 255/467 (54%), Gaps = 42/467 (8%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT 63
+HI L+ S ++ H+ Q+H L+T +H T
Sbjct: 15 KHINHLLNQSNSISHVKQIHAQILRT--------------------IH-----------T 43
Query: 64 PPLFAYNTLIRAYAKTSCSIE-SIKLFDEML---KTGLRPDNFTYPFVVKACGRCLLIGI 119
P F +N LI++Y+K++ + +I L+ ++ + L PD TYPFV+KAC +
Sbjct: 44 PNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFE 103
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVVSWSSMIAGFV 178
G VH+ + K+G + D YI N+L+ YA+C ++ A+ VF+ M R+VVSW+ MI +
Sbjct: 104 GKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYA 163
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLEL 235
L +F M E P+ T+ S++ AC L ++ G +H++ + +
Sbjct: 164 KVGDYDIVLIMFCEMMKVYE-PDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVC 222
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
DV + T LV+MY KCG +E A +VF M +++ SW +I G A +G+ A+ F +M+
Sbjct: 223 DVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMV 282
Query: 296 QT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ + P+SI+F +LSAC+H G+VDEG YF+ M + YN++P++ HYGC+VD+ RAG
Sbjct: 283 KVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGH 342
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL-GANYVLAA 413
I+EA +++ MP +P+AVI RS L AC + L + + K + + + G YVL +
Sbjct: 343 IQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLS 402
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKET 460
V + + W+ L +N KG++K PGCS +++N + E + +T
Sbjct: 403 KVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDT 449
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 251/460 (54%), Gaps = 34/460 (7%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H +K + + C+ + + ++ L + R +F+++ + ++N++I Y+K
Sbjct: 159 VHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDIS-DRTIVSWNSMIAGYSKMG 217
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E+I LF EML+ G+ D FT ++ A + + +G VH I G++ D + N
Sbjct: 218 FCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTN 277
Query: 141 TLLRMYAACKEIDVAKAVFEEM-------------------------------PVRDVVS 169
L+ MYA C + AK VF++M PV++VVS
Sbjct: 278 ALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVS 337
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+S+I V ++A+++FHRM ++ P+ TLVS++S C++ ++ G+ H Y
Sbjct: 338 WNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYIC 397
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
N + + V L +L++MY+KCG ++ A +F M EKN+ SW ++I LA +G G AI
Sbjct: 398 DNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIE 457
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
+F M +GL PD I+F+ +LSACSH GLVD G+ YFD M + I P +EHY CMVD+L
Sbjct: 458 MFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLL 517
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GR G + EA +I+ MP +P+ V+ + LGACR +G L + + K LL+L Y
Sbjct: 518 GRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGN-LEIAKQIMKQLLELGRFNSGLY 576
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
VL +++ S S WD ++ ++ G+ K S+++++
Sbjct: 577 VLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEID 616
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 186/371 (50%), Gaps = 42/371 (11%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + LF+ +P P F YN LIR Y+ ++ ++S+ LF +M+ G P+ FT+PFV+K
Sbjct: 87 LRYAHLLFDQIP-QPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLK 145
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC VH+ K+G+ + N +L Y AC+ I A+ VF+++ R +VS
Sbjct: 146 ACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVS 205
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+SMIAG+ +A+ +F M + TLVSL+SA + N+ G +H Y V
Sbjct: 206 WNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIV 265
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG------- 282
+ G+E+D + AL++MY+KCGH++ A VF+ M +K++ SWT M++ A+ G
Sbjct: 266 ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQ 325
Query: 283 ----------------------RGNY--AISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
G Y A+ LF +M +G+ PD + +ILS CS+ G
Sbjct: 326 IFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGD 385
Query: 319 VDEGKNYFDEMARVY----NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
+ GK A Y I ++ ++DM + G ++ A I MP E N V
Sbjct: 386 LALGKQ-----AHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKNVVSW 439
Query: 375 RSFLGACRNHG 385
+GA HG
Sbjct: 440 NVIIGALALHG 450
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 233/402 (57%), Gaps = 3/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L +F +P + A+N++I Y I I+LF M G++P T ++
Sbjct: 258 LEMAIEIFEQMP-KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIM 316
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C R + G VH + + D ++ ++L+ +Y C ++++A+ +F+ +P VVS
Sbjct: 317 VCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVS 376
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ MI+G+VA +AL +F M+ + +++T S+++AC+ L + G+ IH+ +
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLII 436
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
L+ + + AL++MY+KCG V++AF VF + +++L SWT MI+ +G A+
Sbjct: 437 EKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALE 496
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LFA+M+Q+ +KPD ++F AILSAC H GLVDEG YF++M VY I P +EHY C++D+L
Sbjct: 497 LFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLL 556
Query: 350 GRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAG + EAY I++ P + V +L + ACR H + L + + L+ +P+ +
Sbjct: 557 GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNI-DLGAEIARTLIDKDPDDSST 615
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y+L +++ + + WD + + + GL K PGCSW+++N
Sbjct: 616 YILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQ 657
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 188/356 (52%), Gaps = 3/356 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVTPPLFAYNT 71
SK++ +H + L ++ + I LS L+ + +F+N+ + +N
Sbjct: 16 SKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNG 75
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y K +E+++LF+++L L+PD++TYP V KACG +G +H+ + K
Sbjct: 76 LMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKT 135
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL D +G++L+ MY C + A +F EMP +DV W+++I+ + + DAL+ F
Sbjct: 136 GLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYF 195
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ PNSVT+ + +S+C L+++ G IH + +G LD + +ALV+MY KC
Sbjct: 196 GLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
GH+E A ++F M +K + +W MISG G I LF +M G+KP + S+++
Sbjct: 256 GHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLI 315
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
CS + EGK R I+P + ++D+ + G +E A I + +P
Sbjct: 316 MVCSRSARLLEGKFVHGYTIR-NRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIP 370
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 198/368 (53%), Gaps = 8/368 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+HT +KT L + + S + + + LFN +P + +NT+I Y ++
Sbjct: 128 IHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP-EKDVACWNTVISCYYQSG 186
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++++ F M + G P++ T + +C R L + G +H + G D +I +
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C +++A +FE+MP + VV+W+SMI+G+ +++F RM P
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKP 306
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
TL SL+ C+ + G+ +H Y + N ++ DV + ++L+++Y KCG VE A K+F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIF 366
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
L+ + + SW +MISG G+ A+ LF++M ++ ++ D+I+F+++L+ACS L ++
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALE 426
Query: 321 EGKNYFDEM--ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
+GK + + ++ N + M G ++DM + G ++EA+ + + +P + V S +
Sbjct: 427 KGKEIHNLIIEKKLDNNEVVM---GALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMI 482
Query: 379 GACRNHGQ 386
A +HG
Sbjct: 483 TAYGSHGH 490
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++AC + G +H + +GL +D ++ TL+ Y +C D AK VF+ M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 167 VVS-WSSMIAGFVACDSPSDALKVFHR-MKLANESPNSVTLVSLVSACTSLINVRAGESI 224
+S W+ ++AG+ +AL++F + + P+S T S+ AC L G+ I
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H+ + GL +D+ +G++LV MY KC EKA +FN M EK++ W +IS +G
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY-- 342
A+ F M + G +P+S++ + +S+C+ L ++ G +E+ N ++ +
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI---NSGFLLDSFIS 245
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTE 368
+VDM G+ G +E A I MP +
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKK 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ L+ L+ AC + +++ G+ IH V GL+ D+ L L+ Y C + A VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 261 NLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGL 318
+ M + W +++G N A+ LF K++ LKPDS ++ ++ AC L
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVD---------MLGRAGLIEEAYHIIRNMPTEP 369
GK I + G M+D M G+ E+A + MP +
Sbjct: 122 YVLGK----------MIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKD 171
Query: 370 NA 371
A
Sbjct: 172 VA 173
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 236/396 (59%), Gaps = 3/396 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKAC 111
+ LF+ +P L ++N+L+ + + F M ++G +P+ T VV AC
Sbjct: 116 AQRLFDEMP-NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 174
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ G S+H ++ K+G+ + N+L+ MY +D A +FEEMPVR +VSW+
Sbjct: 175 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 234
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
SM+ + +F+ MK A +P+ T+V+L+ ACT R ESIH+Y
Sbjct: 235 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 294
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G D+ + TAL+ +Y+K G + + +F +++++ +WT M++G A + G AI LF
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
M++ G++ D ++F+ +LSACSH GLV+EGK YF+ M+ VY ++P ++HY CMVD+LGR
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 414
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+G +E+AY +I++MP EP++ + + LGACR +G V L + + LL L+P NY++
Sbjct: 415 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNV-ELGKEVAEQLLSLDPSDHRNYIM 473
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+++ S +G W A+++ + ++ L + PGCS+++
Sbjct: 474 LSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIE 509
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+V A C + ++H+ + K SD +IG+ L+ MY + A+ +F+EMP +D
Sbjct: 68 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 127
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIH 225
+VSW+S+++G L F RM+ + PN VTL+S+VSAC + + G+S+H
Sbjct: 128 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLH 187
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
V G+ + +L+ MY K G ++ A ++F M ++L SW M+ NG
Sbjct: 188 GVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAE 247
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+ LF M + G+ PD + A+L AC+ GL
Sbjct: 248 KGMDLFNLMKRAGINPDQATMVALLRACTDTGL 280
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
+LV +S+CTS V +IH+ + + D +G LV MY K G+ E A ++F+ M
Sbjct: 67 SLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLVDEG 322
K+L SW ++SGL+ G ++ F +M ++G +P+ ++ +++SAC+ +G +DEG
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
K+ + ++ + + +++M G+ G ++ A + MP
Sbjct: 184 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 228
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 218/381 (57%), Gaps = 1/381 (0%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I Y ++E++ LF +++ G+ P+ T V+ AC + +G +H I K G
Sbjct: 451 MISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKG 510
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
L++ +G+++ MYA +D+A F MPV+D V W+ MI F P A+ +F
Sbjct: 511 LENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFR 570
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M + +SV+L + +SAC + + G+ +H + V N D + + L++MYSKCG
Sbjct: 571 QMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCG 630
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A VF++M KN SW +I+ ++GR + LF +M++ G++PD ++F I+S
Sbjct: 631 KLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC H GLVDEG YF M Y I MEH+ CMVD+ GRAG + EA+ I++MP P+A
Sbjct: 691 ACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDA 750
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
S LGACR HG V L K L++L+P YVL ++V + +G W++ ++
Sbjct: 751 GTWGSLLGACRLHGNV-ELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSL 809
Query: 432 INQKGLNKVPGCSWVKVNDGS 452
+ +KG+ K+PG SW+ VN G+
Sbjct: 810 MKEKGVQKIPGYSWIDVNGGT 830
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 17 HHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ Q+H L ++ + + SR + + L S +LF L + L +N LIR
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSL-PWNWLIRG 151
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ C ++ F ML + + PD +T+P+V+KACG + + VH L +G D
Sbjct: 152 FSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMD 211
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+IG++L+++Y I AK +F+E+PVRD + W+ M+ G+V + AL F M+
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ PNSV+ V L+S C + VRAG +H + +G E D + ++ MYSKCG++
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A K+F++M + + +W +I+G NG + A++LF M+ +G+K DSI+F++ L +
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
G + K + R + + + +VD+ + G +E A
Sbjct: 392 SGSLKYCKEVHSYIVR-HGVPFDVYLKSALVDIYFKGGDVEMA 433
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 170/324 (52%), Gaps = 12/324 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+H + LF+ LPV + +N ++ Y K ++ F EM + ++P++ ++ ++
Sbjct: 228 IHDAKYLFDELPVRDCIL-WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLS 286
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C ++ G +H L+ + G +SD + NT++ MY+ C + A+ +F+ MP D V+
Sbjct: 287 VCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVT 346
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ +IAG+V +A+ +F M + +S+T S + + +++ + +HSY V
Sbjct: 347 WNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIV 406
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G+ DV L +ALV++Y K G VE A K F ++ T MISG NG A++
Sbjct: 407 RHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALN 466
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD-- 347
LF +IQ G+ P+ ++ +++L AC+ L + GK ++ +K +E+ C V
Sbjct: 467 LFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDI-----LKKGLENV-CQVGSS 520
Query: 348 ---MLGRAGLIEEAYHIIRNMPTE 368
M ++G ++ AY R MP +
Sbjct: 521 ITYMYAKSGRLDLAYQFFRRMPVK 544
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 188/367 (51%), Gaps = 4/367 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +++ + + + + I + S +L R +F+ +P T + +N LI Y +
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTV-TWNGLIAGYVQN 357
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ E++ LF M+ +G++ D+ T+ + + + + VHS I + G+ D Y+
Sbjct: 358 GFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLK 417
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ +Y ++++A F++ + DV ++MI+G+V +AL +F +
Sbjct: 418 SALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMV 477
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN +T+ S++ AC +L +++ G+ +H + GLE +G+++ MY+K G ++ A++
Sbjct: 478 PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQF 537
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M K+ W +MI + NG+ AI LF +M +G K DS+S SA LSAC++ +
Sbjct: 538 FRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPAL 597
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK + R I T ++DM + G + A + +M N V S +
Sbjct: 598 YYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKLALARSVF-DMMDWKNEVSWNSIIA 655
Query: 380 ACRNHGQ 386
A NHG+
Sbjct: 656 AYGNHGR 662
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 142/299 (47%), Gaps = 16/299 (5%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH LK L+ N C + I + + S L F +PV + +N +I ++++
Sbjct: 501 ELHCDILKKGLE-NVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSV-CWNLMIVSFSQ 558
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+I LF +M +G + D+ + + AC + G +H + + SD ++
Sbjct: 559 NGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFV 618
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+TL+ MY+ C ++ +A++VF+ M ++ VSW+S+IA + P + L +FH M A
Sbjct: 619 ASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGI 678
Query: 199 SPNSVTLVSLVSAC--TSLINVRAGESIHSYAVVN---GLELDVALGTALVEMYSKCGHV 253
P+ VT + ++SAC L++ E I+ + + G+ + +V++Y + G +
Sbjct: 679 QPDHVTFLVIMSACGHAGLVD----EGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRL 734
Query: 254 EKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+AF M + +W ++ A GN ++ A L P++ + +LS
Sbjct: 735 HEAFDTIKSMPFTPDAGTWGSLLG--ACRLHGNVELAKLASKHLVELDPNNSGYYVLLS 791
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 248/435 (57%), Gaps = 5/435 (1%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+L +LH LK HN +++ + S + SL + +F ++ + + ++N LI
Sbjct: 410 NLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIR-SKTVNSWNALIGG 468
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
Y+++S S+ + +M +GL PD FT ++ AC + + +G VH LI + L+ D
Sbjct: 469 YSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERD 528
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ +LL +Y C E+ A +F+ M + +VSW++M+ G++ P AL +F +M L
Sbjct: 529 SFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL 588
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
P ++++S+ AC+ L ++R G H YA+ LE + + ++++MY+K G V +
Sbjct: 589 YGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVME 648
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+FKVFN ++E+++ SW M+ G +GR AI LF +M +TG PD ++F +L+AC+H
Sbjct: 649 SFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH 708
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI-IRNMPTEPNAVIL 374
GLV EG Y D+M ++ + PT++HY C++DML RAG ++EA I M EP I
Sbjct: 709 SGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIW 768
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
L +CR H + L + + + L EPE NYVL +++ + SG WD ++ + +
Sbjct: 769 NFLLSSCRIH-KNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKE 827
Query: 435 KGLNKVPGCSWVKVN 449
L K GCSW+++N
Sbjct: 828 MSLRKDAGCSWIELN 842
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 159/312 (50%), Gaps = 14/312 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
IQL + +H L + L ++ + +R I + S+ S +RS+F+ L LF
Sbjct: 97 IQLGRKIHQL-----VSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALR-KKNLFQ 150
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I +Y++ +++F +M+ ++GL PDNFT+P VVKAC + +G +VH L+
Sbjct: 151 WNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLV 210
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K L D ++ N L+ Y + A VF+ MP R++VSW+SMI F +
Sbjct: 211 VKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECF 270
Query: 188 KVFHRMKLANE----SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ +M ++ +P+ TL +++ C + G+ +H A+ L+ +V + AL
Sbjct: 271 LLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNAL 330
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG--LKP 301
++MYSKCG + A +F L KN+ SW M+ G + G + L +M+ G L+
Sbjct: 331 MDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRA 390
Query: 302 DSISFSAILSAC 313
D ++ + C
Sbjct: 391 DEVTILNAVPVC 402
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 217 NVRAGESIHSYAVVNG-LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+++ G IH + L D L T ++ MYS CG + + VF+ +R+KNL W +I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 276 SGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
S + N + + +F KMI ++GL PD+ +F ++ AC+ + V G + +
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++ +V G G + +A + + MP E N V S + ++G
Sbjct: 216 VEDVFVS-NALVSFYGTNGSVSDALRVFKIMP-ERNLVSWNSMIRVFSDNG 264
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 243/434 (55%), Gaps = 6/434 (1%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H H + + FL L I++ + L R +F+ +P T + + LI ++
Sbjct: 110 HAHLVDSHFLDNHLVLQNIIVNMYAKCG---CLDDARRMFDEMP-TKDMVTWTALIAGFS 165
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ + +++ LF +ML+ GL+P++FT ++KA G + G +H+ K G S Y
Sbjct: 166 QNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVY 225
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+G+ L+ MYA C +D A+ F+ MP + VSW+++I+G AL + +M+ N
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN 285
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P T S+ SAC S+ + G+ +H++ + +GL+L +G L++MY+K G ++ A
Sbjct: 286 FQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAK 345
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ + + ++ SW M++G A +G G + F +M++ G++P+ ISF +L+ACSH G
Sbjct: 346 RVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
L+DEG YF E+ + Y ++P + HY VD+LGR GL++ A IR MP EP A + +
Sbjct: 406 LLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
LGACR H + + L + +L+P +L +++ + +G W A++ + + G+
Sbjct: 465 LGACRMH-KNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGV 523
Query: 438 NKVPGCSWVKVNDG 451
K P CSWV++ +
Sbjct: 524 KKQPACSWVEIENA 537
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALV 244
AL + R L P+ L+ CT L V G +H++ V + L+ + L +V
Sbjct: 74 ALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG ++ A ++F+ M K++ +WT +I+G + N R A+ LF +M++ GL+P+
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+ S++L A +D G Y + ++ +VDM R G ++ A
Sbjct: 191 TLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 365 MPTE 368
MPT+
Sbjct: 250 MPTK 253
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 222/392 (56%), Gaps = 10/392 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P L A+N +I +A + E+I F +M GL PD T ++ AC + G V
Sbjct: 330 PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQV 389
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDS 182
H I K+GLD D + NTLL MYA C E+ A FEEM D+VSW++++ + D
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ 449
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+ ++ M ++ P+ +TL +++ A +++ G +H YA+ GL D ++
Sbjct: 450 AEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNG 509
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+++Y+KCG ++ A K+F+ M ++ SW+ +I G A G G A+ LF M + +KP+
Sbjct: 510 LIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPN 569
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F +L+ACSH+GLV+EG + M + + I PT EH CMVD+L RAG + EA I
Sbjct: 570 HVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFI 629
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSL 418
M +P+ V+ ++ L AC+ HG V ++GK +LK++P A +VL ++ +
Sbjct: 630 HQMAFDPDIVVWKTLLAACKTHGNV-----DVGKRAAENILKIDPSNSAAHVLLCNIYAS 684
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
GNW+ A L + Q+G+ KVPG SW++V D
Sbjct: 685 KGNWEDVARLRSLMKQRGVRKVPGQSWIEVKD 716
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 179/379 (47%), Gaps = 12/379 (3%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNT 71
+++ H ++H LK S H + IL SL + +F+ +P + ++ +
Sbjct: 77 RSLEHGKKIHDHMLK-SKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMP-ERNVVSWTS 134
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I Y++ +++ + +ML++G+ PD FT+ ++KAC IG+G +H+ + K
Sbjct: 135 VIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSE 194
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+ N L+ MY I A VF M RD++SW SMIAGF +AL F
Sbjct: 195 FGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFK 254
Query: 192 RM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M PN S+ SAC+SL+ G +H ++ GL DV G +L +MY+KC
Sbjct: 255 EMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKC 314
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + A VF + +L +W +I+G A G AI+ F++M GL PD I+ ++L
Sbjct: 315 GLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLL 374
Query: 311 SACSHLGLVDEG---KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
AC+ + +G Y ++M ++ P ++ M + + +A M
Sbjct: 375 CACTSPSELYQGMQVHGYINKMGLDLDV-PVCN---TLLTMYAKCSELRDAIFFFEEMRC 430
Query: 368 EPNAVILRSFLGACRNHGQ 386
+ V + L AC H Q
Sbjct: 431 NADLVSWNAILTACMRHDQ 449
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 187/430 (43%), Gaps = 57/430 (13%)
Query: 21 QLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH LK+ + +IS + ++L I +F+ + T L ++ ++I +
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIID---ALDVFSRM-ATRDLISWGSMIAGF 240
Query: 77 AKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ +E++ F EML G+ P+ F + V AC L G +H + K GL D
Sbjct: 241 SQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRD 300
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+ G +L MYA C + A+ VF ++ D+V+W+++IAGF +A+ F +M+
Sbjct: 301 VFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH 360
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
P+ +T+ SL+ ACTS + G +H Y GL+LDV + L+ MY+KC +
Sbjct: 361 QGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRD 420
Query: 256 AFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA-- 312
A F MR +L SW +++ + + L M + +PD I+ + +L A
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA 480
Query: 313 ------------CSHL------------GLVD---------EGKNYFDEMARVYNIKPTM 339
C L GL+D FD M I P +
Sbjct: 481 ETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-----INPDV 535
Query: 340 EHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
+ ++ + G EEA + +R + +PN V L AC + G V + K
Sbjct: 536 VSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLV----EEGWK 591
Query: 397 LLLKLEPELG 406
L +E E G
Sbjct: 592 LYGTMEKEFG 601
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 9/311 (2%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N I + K E+IK F+ + K TG TY +++ AC + G +H +
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K D + N +L MY CK + A+ VF+ MP R+VVSW+S+IAG+ +AL+
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ +M + P+ T S++ AC+SL ++ G +H++ + + + AL+ MY+
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYT 210
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK-PDSISFS 307
K + A VF+ M ++L SW MI+G + G A+ F +M+ G+ P+ F
Sbjct: 211 KSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFG 270
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEA----YHII 362
++ SACS L + G+ M+ + + + GC + DM + GL+ A Y I
Sbjct: 271 SVFSACSSLLQPEYGRQ-LHGMSIKFGLGRDV-FAGCSLCDMYAKCGLLSCARVVFYQIG 328
Query: 363 RNMPTEPNAVI 373
R NA+I
Sbjct: 329 RPDLVAWNAII 339
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 228/389 (58%), Gaps = 7/389 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC----GRCLLIGIGG 121
++ +N L RA E + L+ M + G+ D FTY +V+KAC L+ G
Sbjct: 144 IYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGR 203
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H I + G + +I TLL MYA + A VF++MPV++VVSWS+MIA +
Sbjct: 204 EIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNG 263
Query: 182 SPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P +AL++F +M L N+ PNSVT+VS++ AC +L + G+ +H Y + GL+ + +
Sbjct: 264 KPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPV 323
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+ALV +Y++CG++E +VF M ++++ SW +IS +G G AI +F +MI GL
Sbjct: 324 VSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGL 383
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
P ISF ++L ACSH GLV+EGK F+ M R + I P++EHY CMVD+LGRA ++EA
Sbjct: 384 SPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAA 443
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
II +M EP + S LG+CR H V L + L +LEP NYVL A + + +
Sbjct: 444 KIIDDMRIEPGPKVWGSLLGSCRIHCNV-ELAERATSRLFELEPTNAGNYVLLADIYAEA 502
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ + + + +GL KVPG S +++
Sbjct: 503 KMWNEVKRVKMLLEARGLQKVPGRSCIEI 531
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 91 EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK 150
++L P TY ++ +C R + G +H + G D D ++ L+ MY+
Sbjct: 68 QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELD 127
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
ID A+ VF++ R + W+++ + L ++ RM + T ++
Sbjct: 128 SIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLK 187
Query: 211 ACTS-------LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
AC + L+N G IH + + +G E V + T L++MY++ G V A +VF+ M
Sbjct: 188 ACVASEAFVSLLLN---GREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQM 244
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDE 321
KN+ SW+ MI+ + NG+ A+ LF KM+ L P+S++ ++L AC+ L +++
Sbjct: 245 PVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQ 304
Query: 322 GKNYFDEMAR--VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
GK + R + +I P + +V + R G +E + + M
Sbjct: 305 GKLMHGYILRRGLDSILPVV---SALVTVYARCGNLELGHRVFERM 347
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 9/229 (3%)
Query: 193 MKLANESPNSV--TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+++ ++ PN T L+ +CT ++ G +H + + +G + D L T L+ MYS+
Sbjct: 67 LQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSEL 126
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
++ A KVF+ R++ + W + L G G + L+ +M + G+ D +++ +L
Sbjct: 127 DSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVL 186
Query: 311 SAC----SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
AC + + L+ G+ + R + + + ++DM R G + A + MP
Sbjct: 187 KACVASEAFVSLLLNGREIHGHILR-HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMP 245
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+ N V + + +G+ L + K++L+ + +L N V SV
Sbjct: 246 VK-NVVSWSAMIACYSKNGKPLEALELFRKMMLENQ-DLLPNSVTMVSV 292
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 222/385 (57%), Gaps = 1/385 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NT+ Y T ++ L EM+ G D T AC R + +G +H L
Sbjct: 266 WNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSRVGWLRLGKEIHGLAV 325
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
++ D + + N L+ MYA CK +D A +F+ + VV+W++MIA F D +A +
Sbjct: 326 RMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMIASFALSDEAEEASR 385
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ H M A PN VT+V+L++ C + N++ G+ +HS+ V NG + L +L++MYS
Sbjct: 386 LVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYS 445
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G + A VF+ M ++++ S+T MI+G G+G A+ LF +MI +G+KPD IS
Sbjct: 446 KSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVT 505
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH GLV EG+ FD+M Y IKP MEHY CMVD+ R+GL+E+A ++ +
Sbjct: 506 VLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNESSSP 565
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P +++ + +GAC + G ++ + + + LL+++ E +YVL A++ + +G WD A +
Sbjct: 566 PTSMMWAALVGACHDRGNII-IGERAARRLLEMKTENAGHYVLIANMYAAAGCWDELATV 624
Query: 429 MVAINQKGLNKVPGCSWVKVNDGSA 453
+ G+ K PG +WV + +G A
Sbjct: 625 RKLMRDLGVTKAPGLAWVDLRNGFA 649
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 163/351 (46%), Gaps = 39/351 (11%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L F SL + T PL YN LI + + ++ + +M ++ + PD FTYP V++
Sbjct: 114 LPFASSLAAD--ATCPL-PYNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLR 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + +G +VH G+ + N L+ MYA ++ A+ VFE M +DVVS
Sbjct: 171 ACAEAGDLALGRAVHLHGLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVS 230
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT------------------------- 204
W+SMI+ +VA A+++F RM+ NSVT
Sbjct: 231 WNSMISAYVAVGQWVQAVELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMV 290
Query: 205 -------LVSLV---SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
V+LV +AC+ + +R G+ IH AV + ++ AL+ MY++C H++
Sbjct: 291 SDGAAVDFVTLVIGSNACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMD 350
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +F ++ + +W MI+ A + A L +M+ G++P+ ++ +L+ C+
Sbjct: 351 SACLLFKMLACPGVVTWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCA 410
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ + G+ + + K + ++DM ++G + A ++ M
Sbjct: 411 RVANLQHGQELHSHIVK-NGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTM 460
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + +NT+I ++A + + E+ +L EM+ G++P+ T ++ C R + G +
Sbjct: 362 PGVVTWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQEL 421
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
HS I K G + + N+L+ MY+ + VA+ VF+ M RD++S++ MIAG+
Sbjct: 422 HSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKG 481
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTA 242
+ AL++F +M + P+ +++V+++SAC+ V GE + + G++ + +
Sbjct: 482 TIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSC 541
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL--ADNGRGNYAI 288
+V++Y++ G +EKA + N E + ++M + L A + RGN I
Sbjct: 542 MVDLYARSGLLEKAEGMLN---ESSSPPTSMMWAALVGACHDRGNIII 586
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 222/393 (56%), Gaps = 7/393 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRC 114
+F LP P + ++I A+ + +++ F M K GL PD FT+ V+ ACG
Sbjct: 219 VFVELP-QPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNL 277
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G VH+ + GL + ++ ++L+ MY C+ ++ ++ VF+ M V+++VSW++++
Sbjct: 278 GRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALL 337
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+ +++F K ++ + +++ AC L VR G+ +H V
Sbjct: 338 GGYCQNGDFESVIRIFREGK----KVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCW 393
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
DV +ALV++Y+KCG ++ A+++F M +NL +W MI G A NGRG LF +M
Sbjct: 394 RDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEM 453
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
I+ G++PD ISF +L ACSH GLVD+GK YF M VY IKP +EHY CM+D+LGRAGL
Sbjct: 454 IEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGL 513
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+EEA ++I N + LGAC + + K ++L+P+ +YV A+
Sbjct: 514 LEEAENLIENANCRDEPSLWTVLLGACAASPHSA-TAERIAKKAVELKPDHHLSYVYLAN 572
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
V G WD A ++ + ++G+ K+PG SW++
Sbjct: 573 VYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIE 605
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 165/323 (51%), Gaps = 7/323 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P AY I Y K+ E+I + + + T L F Y +++ C + + G
Sbjct: 25 PQSKAYK--IIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQF 82
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
HS K GLD+D+++GN+LL +Y + A+ VF+ + +D++SW+SMI G+V +
Sbjct: 83 HSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEK 142
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
P +L++F M PN TL +++ AC+ L ++R G+ H +V G +L+ + TA
Sbjct: 143 PKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTA 202
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKP 301
L++MY + V+ A VF + + + WT +IS N + A+ F M + GL P
Sbjct: 203 LIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSP 262
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +F +L+AC +LG + +GK ++ + + +VDM G+ L+ ++ +
Sbjct: 263 DGFTFGTVLTACGNLGRLKQGKEVHAKVI-TSGLSGNVFVESSLVDMYGKCRLVNQSQCV 321
Query: 362 IRNMPTEPNAVILRSFLGA-CRN 383
M + N V + LG C+N
Sbjct: 322 FDRMSVK-NLVSWTALLGGYCQN 343
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 234/433 (54%), Gaps = 6/433 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L ++ + + S +L S + R +F+ + + +N ++ YA
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 187
Query: 81 CSIESIKLFDEMLK--TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD--SDK 136
+++ +F EM + +PD FT+ ++KAC G VH+ + G S+
Sbjct: 188 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 247
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ L+ MY C+ + VA VFE + ++V+ W++++ G ++AL++F R +
Sbjct: 248 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 307
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+S L S+V V G +H Y + + DV+ G ++V+MY KCG ++A
Sbjct: 308 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 367
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
++F MR N+ SWT M++GL +G G A++LF +M G++PD +++ A+LSACSH
Sbjct: 368 ERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHA 427
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLVDE + YF + R ++P EHY CMVD+LGRAG + EA +IR MP EP + ++
Sbjct: 428 GLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQT 487
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L ACR H V + G +LL ++ + NYV ++V + +G W ++ A+ ++G
Sbjct: 488 LLSACRVHKDVA-VGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG 546
Query: 437 LNKVPGCSWVKVN 449
L K GCSWV+V
Sbjct: 547 LKKQGGCSWVEVG 559
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 5/247 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++A R + G +H I K+G SD +GN L+ MY C E+D+A VF M R+
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIH 225
VVSW++++ GF+ + L++ M+ A+E +PN TL + + AC + + AG IH
Sbjct: 70 VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIH 129
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRG 284
V G + + ++LV +YSK G + A +VF+ + +W M+SG A G G
Sbjct: 130 GLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189
Query: 285 NYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEH 341
A+ +F +M + +PD +F+++L ACS LG EG M A ++
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249
Query: 342 YGCMVDM 348
G +VDM
Sbjct: 250 AGALVDM 256
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+ L+ A ++R G +H G D LG L++MY KCG ++ A +VF MR
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLG 317
++N+ SWT ++ G +G + L +M + P+ + SA L AC +G
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG 120
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 262/480 (54%), Gaps = 41/480 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
V ++H +KT L+ + + + F+ L + FT+ +F +P + ++N +I
Sbjct: 124 VREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQ-VFEEMPDRDAV-SWNIMI 181
Query: 74 RAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
Y + E++ ++ M ++ +P+ T + AC + +G +H I L
Sbjct: 182 SGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYI-ASEL 240
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD----------- 181
D +GN LL MY C + VA+ +F+ M V++V W+SM+ G+V C
Sbjct: 241 DLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFER 300
Query: 182 SPS--------------------DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
SPS + + +F M++ P+ +V+L++ C + G
Sbjct: 301 SPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG 360
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH+Y N +++D +GTAL+EMY+KCG +EK+F++FN ++EK+ SWT +I GLA N
Sbjct: 361 KWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMN 420
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G+ + A+ LF M GLKPD I+F A+LSACSH GLV+EG+ F M+ +Y+I+P +EH
Sbjct: 421 GKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEH 480
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLGACRNHGQVLYLDDNLGKLL 398
YGC +D+LGRAGL++EA +++ +P + N +I+ + L ACR +G + + + L L
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNI-DMGERLATAL 539
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSK 458
K++ + + L AS+ + + W+ ++ + G+ KVPG S ++V+ + +S+
Sbjct: 540 AKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGKWQQRLSE 599
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 205/396 (51%), Gaps = 44/396 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL---HFTRSLFNNLPVTP 64
+L++ K++ L Q+ L + +++ + S+ SL ++ +FN + P
Sbjct: 13 SLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIH-DP 71
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF YN +I+A+ K+ +I LF ++ + G+ PDN+TYP+V+K G + G VH
Sbjct: 72 SLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVH 131
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + K GL+ D Y+ N+ + MYA ++ VFEEMP RD VSW+ MI+G+V C
Sbjct: 132 AFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFE 191
Query: 185 DALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A+ V+ RM +NE PN T+VS +SAC L N+ G+ IH Y + + L+L +G AL
Sbjct: 192 EAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNAL 250
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA---------------- 287
++MY KCGHV A ++F+ M KN+ WT M++G G+ + A
Sbjct: 251 LDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWT 310
Query: 288 ---------------ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEM 329
I+LF +M G+KPD +L+ C+ G +++GK NY DE
Sbjct: 311 AMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDE- 369
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
IK +++M + G IE+++ I +
Sbjct: 370 ---NRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGL 402
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 251/446 (56%), Gaps = 17/446 (3%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+L L+ L + C+ + + +++ ++ + +F +P + ++ LI Y
Sbjct: 275 QLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKND-VISWTALISGY 333
Query: 77 AKTSCSIESI-KLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ + LF EML ++P++ TY ++K+C G VH+ + K S
Sbjct: 334 VQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASA 393
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN L+ MYA ++ A+ VF ++ R ++ C + + HR+
Sbjct: 394 HTVGNALVSMYAESGCMEEARRVFNQLYERSMI----------PCITEGRDFPLDHRIVR 443
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ +S T SL+SA S+ + G+ +H+ ++ G D + +LV MYS+CG++E
Sbjct: 444 MDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLED 503
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A + FN ++++N+ SWT MISGLA +G A+SLF MI TG+KP+ +++ A+LSACSH
Sbjct: 504 ACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSH 563
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GLV EGK YF M R + + P MEHY CMVD+L R+G+++EA I MP + +A++ +
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWK 623
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR+H + + + K +++LEP A YVL +++ + +G WD A + A+
Sbjct: 624 TLLGACRSHDNI-EVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDN 682
Query: 436 GLNKVPGCSWVKVNDGSAEEMSKETA 461
LNK G SW++V + + E + +T+
Sbjct: 683 NLNKETGLSWMEVENTTHEFRAGDTS 708
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 199/403 (49%), Gaps = 21/403 (5%)
Query: 22 LHTLFLKTSLDHNTCIISRFILT--SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH L+ L +++ +LT S ++ R++F+ + + ++ + A+
Sbjct: 70 LHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARN 129
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGL-DSDKY 137
S+ L EML++GL P+ +T AC L +GG V L+ K+GL +D
Sbjct: 130 GAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVA 189
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+G+ L+ M A ++ A+ VF+ + + VV W+ +I+ +V + +A+++F
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDG 249
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG---HVE 254
P+ T+ S++SACT L +VR G +HS A+ GL D + LV+MY+K ++
Sbjct: 250 FEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMD 309
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNG-RGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
A KVF M + ++ SWT +ISG +G + N ++LF +M+ +KP+ I++S+IL +C
Sbjct: 310 YANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSC 369
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+ + D G+ A V H +V M +G +EEA + N
Sbjct: 370 ASISDHDSGRQVH---AHVIKSNQASAHTVGNALVSMYAESGCMEEARRVF-------NQ 419
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+ RS + C G+ LD + ++ + + A+ + AA+
Sbjct: 420 LYERSMI-PCITEGRDFPLDHRIVRMDVGISSSTFASLISAAA 461
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 244/432 (56%), Gaps = 3/432 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L +LH LK ++ + + F+ + SL + + +F+ + + L ++N LI YA
Sbjct: 398 LKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIR-SKTLNSWNALIGGYA 456
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++S S+ +M +GL PDNFT ++ AC + + +G VH I + L+ D +
Sbjct: 457 QSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 516
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ ++L +Y C E+ + +F+ M +VSW+++I G + P AL +F +M L
Sbjct: 517 VYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG 576
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P ++++++ AC+ L ++R G H+YA+ + LE + + ++++MY+K G + ++
Sbjct: 577 IQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSS 636
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
KVFN ++EK+ SW MI G +GR AI LF +M +TG PD ++F +L+AC+H G
Sbjct: 637 KVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSG 696
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
L+ EG Y D+M + +KP ++HY C++DMLGRAG ++ A + M EP+ I S
Sbjct: 697 LLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSL 756
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L CR H Q L + + + L LEPE NYVL +++ + G WD ++ + + L
Sbjct: 757 LSWCRIH-QNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSL 815
Query: 438 NKVPGCSWVKVN 449
K GCSW+++N
Sbjct: 816 RKDAGCSWIELN 827
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 22/308 (7%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
I++ + +HHL + T L + + +R I + ++ S +RS F+ L + LF
Sbjct: 100 IEMGRKIHHL-----VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALR-SKNLFQ 153
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I +Y++ E +++F +M+ KT L PDNFT+P V+KAC +GIG +VH L+
Sbjct: 154 WNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLV 213
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL D ++GN L+ Y + A +F+ MP R++VSW+SMI F D+ D
Sbjct: 214 VKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVF--SDNGDDGA 271
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ P+ T+V+++ C + G+ +H +AV L+ ++ + AL++MY
Sbjct: 272 FM----------PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMY 321
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI--QTGLKPDSIS 305
SK G + + +F L KN+ SW M+ G + G + L +M+ +K D ++
Sbjct: 322 SKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVT 381
Query: 306 FSAILSAC 313
+ C
Sbjct: 382 ILNAVPVC 389
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-------------------RPDNFTYPF 106
LF N L+ Y +++KLFD M + L PD T
Sbjct: 222 LFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVT 281
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+ C R IG+G VH K+ LD + + N L+ MY+ I ++ +F+ ++
Sbjct: 282 VLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKN 341
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESI 224
VVSW++M+ GF A + +M +E + VT+++ V C + + + +
Sbjct: 342 VVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKEL 401
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H Y++ D L A V Y+KCG + A +VF+ +R K L SW +I G A +
Sbjct: 402 HCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDP 461
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
++ +M +GL PD+ + ++LSACS L + GK
Sbjct: 462 RLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGK 500
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVS------LVSACTSLINVRAGESIHSY 227
I+ F + +V +ES + V L+ L+ A ++ G IH
Sbjct: 50 ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHH- 108
Query: 228 AVVNG---LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+V+G L D L T ++ MY+ CG + + F+ +R KNL W +IS + N
Sbjct: 109 -LVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELY 167
Query: 285 NYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEG 322
+ + +F KMI +T L PD+ +F ++ AC+ G+ D G
Sbjct: 168 HEVLEMFIKMISKTHLLPDNFTFPCVIKACA--GISDVG 204
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 236/395 (59%), Gaps = 3/395 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
+ LF+ +P L ++N+L+ + + F M ++G +P+ T VV AC
Sbjct: 194 QRLFDEMP-NRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 252
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G S+H ++ K+G+ + N+L+ MY +D A +FEEMPVR +VSW+S
Sbjct: 253 XMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 312
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
M+ + +F+ MK A +P+ T+V+L+ ACT R ESIH+Y G
Sbjct: 313 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 372
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
D+ + TAL+ +Y+K G + + +F +++++ +WT M++G A + G AI LF
Sbjct: 373 FNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFD 432
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
M++ G++ D ++F+ +LSACSH GLV+EGK YF+ M+ VY ++P ++HY CMVD+LGR+
Sbjct: 433 LMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRS 492
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G +E+AY +I++MP EP++ + + LGACR +G V L + + LL L+P NY++
Sbjct: 493 GRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNV-ELGKEVAEQLLSLDPSDHRNYIML 551
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+++ S +G W A+++ + ++ L + PGCS+++
Sbjct: 552 SNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIE 586
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+V A C + ++H+ + K SD +IG+ L+ MY + A+ +F+EMP RD
Sbjct: 145 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRD 204
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIH 225
+VSW+S+++G L F RM+ + PN VTL+S+VSAC + + G+S+H
Sbjct: 205 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLH 264
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
V G+ + +L+ MY K G ++ A ++F M ++L SW M+ NG
Sbjct: 265 GVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAE 324
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+ LF M + G+ PD + A+L AC+ GL
Sbjct: 325 KGMDLFNLMKRAGINPDQATMVALLRACTDTGL 357
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 194 KLANESPNSVTLV-SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
KL N S + ++V SLV A +S +V +IH+ + + D +G LV MY K G+
Sbjct: 130 KLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGY 189
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILS 311
E A ++F+ M ++L SW ++SGL+ G ++ F +M ++G +P+ ++ +++S
Sbjct: 190 DEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVS 249
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
AC+ +G +DEGK+ + ++ + + +++M G+ G ++ A + MP
Sbjct: 250 ACAXMGALDEGKSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 305
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 235/437 (53%), Gaps = 17/437 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLS----ISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
LH + ++ +DH +++ I S + + +R LF+ L ++ +++ Y+
Sbjct: 93 LHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALGSGRTAASWTSMVAGYS 152
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ ++LF M++ G+ FT + AC + +G +H L + +++
Sbjct: 153 RWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLT 212
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L+ MY +C + A+ +F+E+P R++V+W++MIA + C+ AL++ M L
Sbjct: 213 VANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHLM-ALQLLREMNL-- 269
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
PN TL S+ SAC L ++R G+ +H A+ D+ + ALV+MYSKCG + A
Sbjct: 270 -QPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAK 328
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
K+FN+M K+ SWT MI+G NG N +I LF MI G+ PD + F ++ AC+H G
Sbjct: 329 KMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGG 388
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVDEG N+F M YN++P E YGC+ ++L RAG + EA+ +I MP P+ + +
Sbjct: 389 LVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGAL 448
Query: 378 LGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
LGAC+ H V LG+L ++++ P+ YVL A++ + W A+ +
Sbjct: 449 LGACKMHKNV-----ELGRLAARKIIEINPDRAKTYVLLANIYAAGNKWGEYADTRRLLR 503
Query: 434 QKGLNKVPGCSWVKVND 450
G K G SW+ V D
Sbjct: 504 GIGSRKEAGTSWIDVTD 520
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 158/327 (48%), Gaps = 20/327 (6%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R++F+ +P + A+ ++ YA C ++ LF ML G+ P+ FT V+
Sbjct: 18 ALRHARAVFDEMP-DRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVL 76
Query: 109 KAC------GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---IDVAKAVF 159
AC G C S+H++ + G+D Y+ N L+ YA+C+E ++ ++ +F
Sbjct: 77 TACRGGAADGGCE----PSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLF 132
Query: 160 EEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
+ + R SW+SM+AG+ L++F M + T + AC S+ N+
Sbjct: 133 DALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANL 192
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ +H + ++ + +L++MY C ++ A ++F+ + E+NL +W MI+
Sbjct: 193 CVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWY 252
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+ + N+ ++L + + L+P+ + ++I SAC+ L + G+ R N
Sbjct: 253 S---QCNHLMAL-QLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALR-RNYGKD 307
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++ +VDM + G I A + M
Sbjct: 308 LQMCNALVDMYSKCGSIANAKKMFNMM 334
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
TL++ A + A+AVF+EMP RDVV+W++M++G+ + S AL +F RM A P
Sbjct: 8 TLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGP 67
Query: 201 NSVTLVSLVSACTSLINVRAGE--SIHSYAVVNGLELDVALGTALVEMYSKCGH---VEK 255
N TL S+++AC E S+H+ AV G++ + AL+E Y+ C VE+
Sbjct: 68 NEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEE 127
Query: 256 AFKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+ K+F+ L + SWT M++G + G+ + LF MIQ G++ + S L AC+
Sbjct: 128 SRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACA 187
Query: 315 HLGLVDEGKN-YFDEMARVYNIKPT-----MEHYGCMVDMLGRAGLIEE----------- 357
+ + G+ + + + +N T ++ Y ++L L +E
Sbjct: 188 SIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNT 247
Query: 358 ------------AYHIIRNMPTEPNAVILRSFLGAC 381
A ++R M +PN L S AC
Sbjct: 248 MIAWYSQCNHLMALQLLREMNLQPNCFTLTSITSAC 283
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
T L++ G + A VF+ M ++++ +WT M+SG A NG +YA+ LF +M+ G+
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVG 66
Query: 301 PDSISFSAILSACSHLGLVDEG 322
P+ + S++L+AC G D G
Sbjct: 67 PNEFTLSSVLTACRG-GAADGG 87
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 209/375 (55%), Gaps = 14/375 (3%)
Query: 88 LFDEMLK------------TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+FDE+L+ T L D V +C + G H L G ++
Sbjct: 103 VFDEILESSFINNDEDSNATSLSFDASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIAN 162
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
YIG++L+ Y C E+D A VF+EMPVR+VVSW+++I+GF L+++ M+
Sbjct: 163 AYIGSSLVTFYGKCGELDNAYKVFKEMPVRNVVSWTAIISGFAQDWQVDMCLQLYCLMRN 222
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ PN T SL+SACT + G S H + G + + ALV MY KCG+VE
Sbjct: 223 STLKPNDFTFTSLLSACTGSGALGQGRSAHCQIIEMGFVSYLHIANALVSMYCKCGNVED 282
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
AF +F M K++ SW MI+G A +G I LF +M G+KPD+I+F +LS+C H
Sbjct: 283 AFHIFENMVGKDIVSWNSMIAGYAQHGLAVQGIGLFERMKSQGVKPDAITFLGVLSSCRH 342
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
G V+ G+NYF+ M Y +KP ++HY C+VD+LGRAGL+EEA + I MP PNAVI
Sbjct: 343 AGFVEGGRNYFNSMVE-YGVKPELDHYSCIVDLLGRAGLLEEAQYFIERMPVSPNAVIWG 401
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
S + +CR HG V ++ + L LEPE A +V A++ + G WD AA + + +
Sbjct: 402 SLVSSCRLHGSV-WIGIQAAENTLLLEPECAATHVQLANLYASVGFWDQAARVRKLMKDR 460
Query: 436 GLNKVPGCSWVKVND 450
L PGCSW+++ +
Sbjct: 461 RLKTNPGCSWIEIKN 475
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +PV + ++ +I +A+ ++L+ M + L+P++FT+ ++ AC
Sbjct: 185 VFKEMPVRN-VVSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFTSLLSACTGSG 243
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+G G S H I ++G S +I N L+ MY C ++ A +FE M +D+VSW+SMIA
Sbjct: 244 ALGQGRSAHCQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGKDIVSWNSMIA 303
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ + +F RMK P+++T + ++S+C V G + + V G++
Sbjct: 304 GYAQHGLAVQGIGLFERMKSQGVKPDAITFLGVLSSCRHAGFVEGGRNYFNSMVEYGVKP 363
Query: 236 DVALGTALVEMYSKCGHVEKA 256
++ + +V++ + G +E+A
Sbjct: 364 ELDHYSCIVDLLGRAGLLEEA 384
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 234/433 (54%), Gaps = 6/433 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L ++ + + S +L S + R +F+ + + +N ++ YA
Sbjct: 81 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140
Query: 81 CSIESIKLFDEMLK--TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD--SDK 136
+++ +F EM + +PD FT+ ++KAC G VH+ + G S+
Sbjct: 141 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 200
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ L+ MY C+ + VA VFE + ++V+ W++++ G ++AL++F R +
Sbjct: 201 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 260
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P+S L S+V V G +H Y + + DV+ G ++V+MY KCG ++A
Sbjct: 261 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 320
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
++F MR N+ SWT M++GL +G G A++LF +M G++PD +++ A+LSACSH
Sbjct: 321 ERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHA 380
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLVDE + YF + R ++P EHY CMVD+LGRAG + EA +IR MP EP + ++
Sbjct: 381 GLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQT 440
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L ACR H V + G +LL ++ + NYV ++V + +G W ++ A+ ++G
Sbjct: 441 LLSACRVHKDVA-VGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG 499
Query: 437 LNKVPGCSWVKVN 449
L K GCSWV+V
Sbjct: 500 LKKQGGCSWVEVG 512
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 169/366 (46%), Gaps = 28/366 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLL--IGIGGS 122
+ ++ L+ + + + ++L EM + P+ +T +KAC C++ G
Sbjct: 23 VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKAC--CVVGDTAAGVG 80
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWSSMIAGFVACD 181
+H L + G + ++L+ +Y+ I A+ VF+ + + +W++M++G+
Sbjct: 81 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140
Query: 182 SPSDALKVFHRMKL--ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL--DV 237
DAL VF M+ P+ T SL+ AC+ L R G +H+ +G +
Sbjct: 141 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 200
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
L ALV+MY KC + A +VF + KN+ WT ++ G A G+ A+ LF + ++
Sbjct: 201 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 260
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK-PT---MEHYGCMVDMLGRAG 353
G +PDS S+++ + LV++G+ Y IK PT + +VDM + G
Sbjct: 261 GARPDSHVLSSVVGVLADFALVEQGRQ-----VHCYGIKDPTGTDVSAGNSIVDMYLKCG 315
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L +EA + R M PN V + + HG LG+ + L E+ A V
Sbjct: 316 LPDEAERMFREMRA-PNVVSWTTMVNGLGKHG--------LGREAVALFEEMRAGGVEPD 366
Query: 414 SVSSLS 419
V+ L+
Sbjct: 367 EVTYLA 372
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSV 203
MY C E+D+A VF M R+VVSW++++ GF+ + L++ M+ A+E +PN
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TL + + AC + + AG IH V G + + ++LV +YSK G + A +VF+
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 264 R-EKNLQSWTIMISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVD 320
+ +W M+SG A G G A+ +F +M + +PD +F+++L ACS LG
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 321 EGKNYFDEM-ARVYNIKPTMEHYGCMVDM 348
EG M A ++ G +VDM
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDM 209
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 222/389 (57%), Gaps = 7/389 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL----IGIGG 121
+F +N + RA A S + + L+ +M G+ + FTY +V+KAC L + G
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGK 199
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H+ I + G + ++ TLL +YA + A +VF MP +++VSWS+MIA + +
Sbjct: 200 EIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNE 259
Query: 182 SPSDALKVFHRMKL--ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
P AL++F M L + PN +T+VS++ AC SL + G+ +H+Y + GL+ + +
Sbjct: 260 MPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPV 319
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
L+ MY +CG + +VF+ M+++++ SW +IS +G G AI +F MI G+
Sbjct: 320 LNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGV 379
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
P I+F +L ACSH GLV+E K F+ M Y I P MEHY CMVD+LGRA ++EA
Sbjct: 380 SPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAI 439
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+I+NM +P + S LG+CR H V L + +L +LEP+ NYVL + + + S
Sbjct: 440 ELIQNMDFKPGPTVWGSLLGSCRIHCNV-ELAERASAMLFELEPKNAGNYVLLSHIYAKS 498
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKV 448
W+ + + +GL K+P CSW++V
Sbjct: 499 RMWNDVRRVRKQLESRGLQKIPSCSWIEV 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 7/294 (2%)
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++ C ++K ++L P T+ ++ +C + G VH + GLD D Y
Sbjct: 51 QSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPY 110
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ MY +D A VF+E + + W+++ D L ++ +M
Sbjct: 111 LATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIG 170
Query: 198 ESPNSVTLVSLVSACT----SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
N T ++ AC S+ +R G+ IH++ + +G E V + T L+++Y++ G+V
Sbjct: 171 IPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYV 230
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK--PDSISFSAILS 311
A VF M +KN+ SW+ MI+ A N A+ LF M+ P+ I+ ++L
Sbjct: 231 SYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQ 290
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
AC+ L ++ GK + R + T+ ++ M GR G I + M
Sbjct: 291 ACASLAALEHGKLVHAYVLR-RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P T L+++C ++ G +H V +GL+ D L T L+ MY G V+ A K
Sbjct: 71 NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC--SHL 316
VF+ REK + W + LA RG + L+ +M G+ + +++ +L AC S L
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190
Query: 317 GL--VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + +GK + R + + + ++D+ R G + A + MP +
Sbjct: 191 SICPLRKGKEIHAHILR-HGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDK 243
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 232/398 (58%), Gaps = 7/398 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FN LPV + ++N +I Y E++ LF EM + G PD +TY +KAC
Sbjct: 61 VFNTLPVRN-VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCAD 119
Query: 116 LIGIGGSVHSLIFKVGLD--SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G G +H+ + + G + + L+ +Y C+ + A+ VF+ + + V+SWS++
Sbjct: 120 AAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTL 179
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA--VVN 231
I G+ D+ +A+ +F ++ + + L S++ + G+ +H+Y V
Sbjct: 180 ILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPY 239
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
GL L++++ ++++MY KCG +A +F M E+N+ SWT+MI+G +G GN A+ LF
Sbjct: 240 GL-LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+M + G++PDS+++ A+LSACSH GL+ EGK YF + IKP +EHY CMVD+LGR
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGR 358
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
G ++EA ++I MP +PN I ++ L CR HG V + +G++LL+ E ANYV+
Sbjct: 359 GGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDV-EMGKQVGEILLRREGNNPANYVM 417
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W + ++ + +KGL K G SWV+++
Sbjct: 418 VSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMD 455
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 11/315 (3%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
++ C + L+ G VH ++ K+G D +GN+++ MY+ C + A VF +PVR+
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
V+SW++MIAG+ + +AL +F M+ E P+ T S + AC+ G IH+
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129
Query: 227 YAVVNGLEL--DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+ +G A+ ALV++Y KC + +A KVF+ + EK++ SW+ +I G A
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF ++ ++ + D S+I+ + L+++GK +V M
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
++DM + GL EA + R M E N V + HG +G ++L E
Sbjct: 250 VLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHG--------IGNKAVELFNE 300
Query: 405 LGANYVLAASVSSLS 419
+ N + SV+ L+
Sbjct: 301 MQENGIEPDSVTYLA 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
S L +++ C+ + G+ +H G ++ +G ++++MYSKCG V +A +VFN
Sbjct: 4 SRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFN 63
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+ +N+ SW MI+G + G A++LF +M + G PD ++S+ L ACS E
Sbjct: 64 TLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGE 123
Query: 322 G 322
G
Sbjct: 124 G 124
>gi|255564460|ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537522|gb|EEF39147.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 488
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 259/450 (57%), Gaps = 18/450 (4%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR------SLFN 58
H +L+ S + HL LH L+TSL N + S+ +L + H R S F
Sbjct: 39 HYFSLLHSSPDLTHLRHLHARLLRTSLYDNVVLSSKLVL----MYSHHNRLTPHSLSTFF 94
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLI 117
++P ++++N +I +A+++ +S+ LF +M + + +PD+F+ P V++AC L
Sbjct: 95 HMPCKN-IYSWNIIIGEFARSNLPEKSVDLFIDMRRDSHFQPDDFSLPLVLRACAGSGLG 153
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
+G SVH L K+GL ++G+ L+ MY + A+ VF+EM RD V W+++++G+
Sbjct: 154 KLGSSVHGLCVKMGLAVSLFVGSALVFMYVTFGNVSNARVVFDEMAKRDSVLWTALLSGY 213
Query: 178 VACDSPSDALKVFHRMKLANESP---NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
P L+VF M + N + + V +VSL+ C L +++ G+S+H + V N L
Sbjct: 214 AQNGEPKLGLQVFREM-VDNSTRVKLDWVVMVSLLLVCGQLGSLKHGKSVHGWCVRNCLR 272
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
L+++LG A+V MY KCG + A + F+ M E+++ SW+ +I G +G + A+ LF +M
Sbjct: 273 LELSLGNAIVHMYIKCGMLAYAHRFFDKMPERDVFSWSSLILGYGLSGNVSVALCLFDQM 332
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G+KP+ ++F ILSAC H GLV++ ++YF +M + Y + + HY +VD L RAG
Sbjct: 333 HMRGIKPNDVTFLGILSACGHGGLVEQARSYF-KMMQNYGLVAELRHYATIVDCLARAGR 391
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
EEA I ++P EP+ +L + L CR H V + + + K L++L+PE YVL A+
Sbjct: 392 FEEAEKFISDIPMEPDEAVLGAILAGCRVHNNV-EVGERIAKRLIRLKPEKAGYYVLLAN 450
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ + G + A + ++ +K ++KVPGCS
Sbjct: 451 MYAGVGRFHEAEMVRDSMQEKNMSKVPGCS 480
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 234/396 (59%), Gaps = 10/396 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSC-SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+F+ +PV + + T++ A A E+++ M + G+ P+ +T+ V+ G C
Sbjct: 126 MFDGMPVRN-VVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVL---GAC 181
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G+ +VH+ K GLDSD ++ ++L+ Y ++D + VF+EM RD+V W+S+I
Sbjct: 182 TTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSII 241
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
AGF A+++F RMK A S N TL S++ ACT ++ + AG +H++ V +
Sbjct: 242 AGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAH--VLKYD 299
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ L AL++MY KCG +E A +F+ M ++++ SW+ M+SGLA NG+ A+ +F M
Sbjct: 300 RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLM 359
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
G+ P+ ++ +L ACSH GLV++G +YF M R++ I+P EH+ CMVD+LGRAG
Sbjct: 360 KSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGK 419
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP-ELGANYVLAA 413
++EA I M EP++VI R+ LGACR H L + +LKLEP + GA +L+
Sbjct: 420 LDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNA-SLAAYAAREILKLEPDDQGARVLLSN 478
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + L W A + A+ +G+ K PG SW+++
Sbjct: 479 TYADLR-QWTDAEKPWKAMRDRGMRKEPGRSWIELE 513
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 12/277 (4%)
Query: 98 RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDK----YIGNTLLRMYAACKEI 152
R D + +VK C R G +H + G L D ++ N+L MYA +
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDS-PSDALKVFHRMKLANESPNSVTLVSLVSA 211
D A +F+ MPVR+VV+W++++A + D +AL+ M+ +PN+ T S++ A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
CT+ + A +H+ V GL+ DV + ++L++ Y K G ++ +VF+ M ++L W
Sbjct: 181 CTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I+G A +G G AI LF +M G + + +++L AC+ + +++ G+ A
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVH---AH 294
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
V + + ++DM + G +E+A + MP
Sbjct: 295 VLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQR 331
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 236/396 (59%), Gaps = 3/396 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKAC 111
+ LF+ +P L ++N+L+ + + F M ++G +P+ T VV AC
Sbjct: 173 AQRLFDEMP-NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 231
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ G S+H ++ K+G+ + N+L+ MY +D A +FEEMPVR +VSW+
Sbjct: 232 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 291
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
SM+ + +F+ MK A +P+ T+V+L+ ACT R ESIH+Y
Sbjct: 292 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 351
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G D+ + TAL+ +Y+K G + + +F +++++ +WT M++G A + G AI LF
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
M++ G++ D ++F+ +LSACSH GLV+EGK YF+ M+ VY ++P ++HY CMVD+LGR
Sbjct: 412 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 471
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+G +E+AY +I++MP EP++ + + LGACR +G V L + + LL L+P NY++
Sbjct: 472 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNV-ELGKEVAEQLLSLDPSDHRNYIM 530
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+++ S +G W A+++ + ++ L + PGCS+++
Sbjct: 531 LSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIE 566
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+V A C + ++H+ + K SD +IG+ L+ MY + A+ +F+EMP +D
Sbjct: 125 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 184
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIH 225
+VSW+S+++G L F RM+ + PN VTL+S+VSAC + + G+S+H
Sbjct: 185 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLH 244
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
V G+ + +L+ MY K G ++ A ++F M ++L SW M+ NG
Sbjct: 245 GVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAE 304
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+ LF M + G+ PD + A+L AC+ GL
Sbjct: 305 KGMDLFNLMKRAGINPDQATMVALLRACTDTGL 337
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
+LV +S+CTS V +IH+ + + D +G LV MY K G+ E A ++F+ M
Sbjct: 124 SLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLVDEG 322
K+L SW ++SGL+ G ++ F +M ++G +P+ ++ +++SAC+ +G +DEG
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
K+ + ++ + + +++M G+ G ++ A + MP
Sbjct: 241 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 285
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 224/419 (53%), Gaps = 45/419 (10%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC---LLIGIGGSVHS 125
+N LI + + E+ F +M + G P TY V+ ACG+ +L+G+ VH
Sbjct: 112 WNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGM--QVHG 169
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------IDV 154
+ G+ D + N L+ MYA C + +D
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F MP RD VSW++MI G+V +AL++F M+ +N S + T+VS+++AC
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + GE + Y G+++D +G AL++MYSKCG +E+A VF M ++ +WT +
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I GLA NG G AI +F +MI PD ++F +L+AC+H GLVD+G+ +F M YN
Sbjct: 350 ILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN 409
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I P + HYGC++D+ GRAG I EA I MP PN+ I + L ACR HG + +
Sbjct: 410 IAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG-----NSEI 464
Query: 395 GKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G+L LL+++PE Y L +++ + W+ L I +KG+ K PGCS +++N
Sbjct: 465 GELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMN 523
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 41/318 (12%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
+++ + ML G PD +T+P ++KA R +VH+ + K G+ + ++ +L+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
YAA + A+A+ E V W+++I+G C +A F M A +P V
Sbjct: 86 TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145
Query: 204 TLVSLVSAC-TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T VS++SAC +V G +H V +G+ D+ + ALV+MY++C +E A+K+F+
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDG 205
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-------------------------- 296
M+ +++ SWT ++SGL GR + A LF +M +
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMF 265
Query: 297 -----TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY----NIKPTMEHYGCMVD 347
+ + D + ++++AC+ LG ++ G E RVY IK ++D
Sbjct: 266 REMQCSNVSADEFTMVSVITACAQLGALEMG-----EWVRVYMSRQGIKMDAFVGNALID 320
Query: 348 MLGRAGLIEEAYHIIRNM 365
M + G IE A + ++M
Sbjct: 321 MYSKCGSIERALDVFKDM 338
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 129/260 (49%), Gaps = 5/260 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF +P + ++ +I Y + + E++++F EM + + D FT V+ AC +
Sbjct: 231 RDLFGRMPERDTV-SWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ +G V + + G+ D ++GN L+ MY+ C I+ A VF++M RD +W+++
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNG 232
I G +A+++FHRM +E+P+ VT + +++ACT V G E S
Sbjct: 350 ILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN 409
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLF 291
+ +V +++++ + G + +A + M N W +++ +G +
Sbjct: 410 IAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVT 469
Query: 292 AKMIQTGLKPDSISFSAILS 311
+++Q + P++ + +LS
Sbjct: 470 ERLLQ--MDPENSTVYTLLS 487
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 260/495 (52%), Gaps = 69/495 (13%)
Query: 3 SRHIETLIQLSKTVHHLH---QLHTLFLKTSL--DHNTCIISRFILTSLSIS-LHFTRSL 56
+R T+I L +T H QLH F+ + L H C R + +++S +++ S+
Sbjct: 11 TRAPATIISL-RTCHDFQEVKQLHAQFVVSGLLGYHPLCA-RRLLEAYVTMSQIYYAFSI 68
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F +P +P +F YNT+IR GL DNFTY FV+KAC
Sbjct: 69 FERIP-SPDVFVYNTMIR---------------------GLTMDNFTYTFVLKACSHLKA 106
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV------------------ 158
G VH I K G+ D +I ++L+ MY ID A+ V
Sbjct: 107 PFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISG 166
Query: 159 -------------FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
F++M +D SWS++I G+ ++AL +F M +++ PN L
Sbjct: 167 YLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAAL 226
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
VSL+SAC L + G IH+Y + + L TAL++MY+K G +E + +F M
Sbjct: 227 VSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMAR 286
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
+++ +W +MIS A +G + LF +M+ G++P+ + F AILSACSH G V+EG+ Y
Sbjct: 287 RDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQY 346
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
F +M + IKP++EHYGCMVD+LGRAGL+ +A +I +MP +PN++I S LGACR H
Sbjct: 347 FSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHN 406
Query: 386 QV---LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+ + +N L++LEP G + LA + + +G + AA++ I++K + G
Sbjct: 407 DLKRGTWAFEN----LMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCG 462
Query: 443 CSWVKVNDGSAEEMS 457
S+++V +G+ E +
Sbjct: 463 SSFIEV-EGAVHEFT 476
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 235/428 (54%), Gaps = 1/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
Q+H L +K+ N C+ + + L V+ ++N +I A+ +
Sbjct: 397 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+++ LF ML++G+ PD FTY V+KAC + G +H+ I K L D ++G
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY+ C ++ A+ + + + + VVSW+++I+GF +A K F +M P
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ T +++ C +L+ V G+ IH+ + L+ D + + LV+MYSKCG+++ +F
Sbjct: 577 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 636
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
++ +W M+ G A +G G A+ +F M +KP+ +F A+L AC H+GLV+
Sbjct: 637 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 696
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G +YF M Y + P +EHY C+VD++GR+G + +A +I MP E +AVI R+ L
Sbjct: 697 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSI 756
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C+ HG V + + +L+LEPE A YVL +++ + +G W+ +L + GL K
Sbjct: 757 CKIHGNV-EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 815
Query: 441 PGCSWVKV 448
PGCSW+++
Sbjct: 816 PGCSWIEI 823
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 168/336 (50%), Gaps = 11/336 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +P + ++N+LI Y + I +F +M + G D T+ V+K+C
Sbjct: 128 QKLFDAMP-ERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSS 186
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G G +H L K+G D D G+ LL MYA CK++D + F MP ++ VSWS++
Sbjct: 187 LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAI 246
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG V D L++F M+ A + T S+ +C L +R G +H +A+
Sbjct: 247 IAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF 306
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
DV +GTA ++MY KC ++ A K+FN + NLQS+ +I G A + +G A+ +F
Sbjct: 307 GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRL 366
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDML 349
+ ++GL D +S S AC+ + EG ++K + C ++DM
Sbjct: 367 LQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-----VHGLSMKSLCQSNICVANAILDMY 421
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
G+ G + EA + M + +AV + + A +G
Sbjct: 422 GKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQNG 456
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 3/347 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LKT + I + + + + L + LFN+LP L +YN +I YA++
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP-NHNLQSYNAIIVGYARS 354
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
IE++ +F + K+GL D + +AC G VH L K S+ +
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 414
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N +L MY C + A VFEEM RD VSW+++IA + L +F M +
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T S++ AC + G IH+ + + L LD +G AL++MYSKCG +EKA K+
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 534
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ + E+ + SW +ISG + + A F+KM++ G+ PD+ +++ IL C++L V
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 594
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ GK ++ + ++ +VDM + G +++ I P
Sbjct: 595 ELGKQIHAQIIK-KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 163/341 (47%), Gaps = 7/341 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L +K D + S + + + L + F+++P +++ +I +
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQN 253
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++LF EM K G+ T+ V ++C + +G +H K +D IG
Sbjct: 254 DDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG 313
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L MY C + A+ +F +P ++ S++++I G+ D +AL +F ++ +
Sbjct: 314 TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG 373
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ V+L AC + G +H ++ + + ++ + A+++MY KCG + +A V
Sbjct: 374 LDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 433
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M ++ SW +I+ NG +SLF M+Q+G++PD ++ ++L AC+ +
Sbjct: 434 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 493
Query: 320 DEGKNYFDEMARVYNIKPTMEHYG--CMVDMLGRAGLIEEA 358
+ G + R+ + ++ + ++DM + G++E+A
Sbjct: 494 NCGMEIHN---RIIKSRLGLDSFVGIALIDMYSKCGMMEKA 531
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 23/278 (8%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKT------SCSIESI-----KLFDEMLKTGLRPDN 101
++S F LP++P F+ KT CS + M+ T +P
Sbjct: 20 SKSPFKTLPISP--FSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTV 77
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKV--GL-DSDKYIGNTLLRMYAACKEIDVAKAV 158
F +++ +C S FKV G+ D N +L YA +I VA+ +
Sbjct: 78 FVTNCLIQMYIKC-------SDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKL 130
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+ MP RDVVSW+S+I+G++ + VF +M + T ++ +C+SL +
Sbjct: 131 FDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDH 190
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G IH AV G + DV G+AL++MY+KC ++ + + F+ M EKN SW+ +I+G
Sbjct: 191 GGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGC 250
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
N + LF +M + G+ +F+++ +C+ L
Sbjct: 251 VQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGL 288
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T + C+ + G+ H+ ++ + V + L++MY KC +E AFKVF+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+++ SW M+ G A GRG+ ++ K+ + D +S+++++S H G +
Sbjct: 104 PQRDTVSWNAMLFGYA--GRGDIGVA--QKLFDAMPERDVVSWNSLISGYLHNGDHRKVI 159
Query: 324 NYFDEMARV 332
+ F +M R+
Sbjct: 160 DVFLQMGRM 168
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 233/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H LKT ++ + + I + S S + LF N L +N ++ Y
Sbjct: 1027 QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKD-DLDLACWNAMMFGYIIG 1085
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ++++LF + K+G + D T KACG +L+ G +H+ K G DSD ++
Sbjct: 1086 NDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVN 1145
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ +L MY C ++ A VF + D V+W+SMI+G V + AL+++HRM+ +
Sbjct: 1146 SGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 1205
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ T +L+ A + + + G +H+ + D +GT+LV+MY+KCG++E A+++
Sbjct: 1206 PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRL 1265
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M +N+ W M+ GLA +G A++LF M G++PD +SF ILSACSH GL
Sbjct: 1266 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT 1325
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
E Y M Y I+P +EHY C+VD LGRAGL++EA +I MP + +A I R+ LG
Sbjct: 1326 SEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR G V + L LEP A YVL +++ + + WD + + +K + K
Sbjct: 1386 ACRIQGDV-ETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKK 1444
Query: 440 VPGCSWVKVND 450
PG SW+ V +
Sbjct: 1445 DPGFSWIDVKN 1455
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 199/369 (53%), Gaps = 9/369 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H + +K+ LD + + + + + S +F R +FN++ L ++N++I + A++
Sbjct: 925 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD-LISWNSMISSCAQS 983
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL-IGIGGSVHSLIFKVGLDSDKYI 138
S ES+ LF ++L GL+PD+FT V++AC + + I +H K G +D ++
Sbjct: 984 SLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFV 1043
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
TL+ +Y+ +++ A+ +F+ D+ W++M+ G++ + AL++F + + E
Sbjct: 1044 ATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGE 1103
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ +TL + AC L+ + G+ IH++A+ G + D+ + + +++MY KCG + A
Sbjct: 1104 KSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 1163
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VFN + + +WT MISG DNG + A+ ++ +M Q+ + PD +F+ ++ A S +
Sbjct: 1164 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 1223
Query: 319 VDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+++G+ A V + + + +VDM + G IE+AY + + M N + +
Sbjct: 1224 LEQGRQLH---ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNA 1279
Query: 377 FLGACRNHG 385
L HG
Sbjct: 1280 MLVGLAQHG 1288
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 6/216 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G H+ I G D ++ N LL MY+ C + A+ VF+ P RD+V+W++++ +
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698
Query: 179 ACDSPSDA-----LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
A +D L +F ++ + S +TL ++ C + + A E +H YA+ GL
Sbjct: 699 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E DV + ALV +YSKCG + A +F+ MRE+++ W +M+ G G A LF++
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
++GL+PD S IL+ S + DEGK D++
Sbjct: 819 FHRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQV 853
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 150/300 (50%), Gaps = 33/300 (11%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +++ Y + E+ +LF E ++GLRPD F+ ++ +
Sbjct: 796 WNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG----------------VS 839
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+V D K++ + + + YAA ++ ++ P DV W+ ++ + A++
Sbjct: 840 EVNWDEGKWLADQV-QAYAA------KLSLSDDNP--DVFCWNKKLSECLWAGDNWGAIE 890
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M N ++VTL+ +++A ++ G+ +H AV +GL+ DV++ +LV MYS
Sbjct: 891 CFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 950
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G A +VFN M+ +L SW MIS A + +++LF ++ GLKPD + ++
Sbjct: 951 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 1010
Query: 309 ILSACSHLGLVDEGKNYFDEMA----RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+L ACS L+D G N ++ + NI + ++D+ ++G +EEA + +N
Sbjct: 1011 VLRACS--SLID-GLNISRQIHVHALKTGNIADSFV-ATTLIDVYSKSGKMEEAEFLFQN 1066
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 232/411 (56%), Gaps = 19/411 (4%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
N+P+ + + +I Y++ CS E++ LF +M+ +G P+ T V+ AC
Sbjct: 361 NIPLD--VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 418
Query: 119 IGGSVHSLIFK----------VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RD 166
G +H+ K G D D + N L+ MY+ C+ A+++F+++P+ R+
Sbjct: 419 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 478
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESI 224
VV+W+ MI G +DALK+F M + +PN+ T+ ++ AC L +R G+ I
Sbjct: 479 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538
Query: 225 HSYAVVNGLELDVA--LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
H+Y + + A + L++MYSKCG V+ A VF+ M +K+ SWT M++G +G
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 598
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
RG+ A+ +F KM + G PD I+F +L ACSH G+VD+G +YFD M+ Y + P EHY
Sbjct: 599 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 658
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLE 402
C +D+L R+G +++A+ +++MP EP AV+ + L ACR H V + L K L+++
Sbjct: 659 ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK-LVEMN 717
Query: 403 PELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
E +Y L +++ + +G W A + + + G+ K PGCSWV+ G+A
Sbjct: 718 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTA 768
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 10/278 (3%)
Query: 62 VTP-PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
VTP P +N LIR + K +I + ML+ G RPD+FT P V+KACG G
Sbjct: 115 VTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCG 174
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR---DVVSWSSMIAGF 177
+ H LI G +S+ +I N L+ MY+ C ++ A +F+E+ R DV+SW+S+++
Sbjct: 175 SAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAH 234
Query: 178 VACDSPSDALKVFHRMKL------ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
V + AL +F +M L NE + +++V+++ AC SL V + +H A+ N
Sbjct: 235 VKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN 294
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G DV +G AL++ Y+KCG +E A KVFN+M K++ SW M++G + +G A LF
Sbjct: 295 GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELF 354
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
M + + D ++++A+++ S G E N F +M
Sbjct: 355 KNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 392
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S + +G ++ Y AC D A V E + V W+ +I + A+ V RM
Sbjct: 87 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 146
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
A P+ TL ++ AC L + R G + H NG E +V + ALV MYS+CG +
Sbjct: 147 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 206
Query: 254 EKAFKVFNLMREKNLQ---SWTIMISGLADNGRGNYAISLFAKMI------QTGLKPDSI 304
E+A +F+ + ++ + SW ++S + A+ LF+KM T + D I
Sbjct: 207 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 266
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
S IL AC L V + K R P + ++D + GL+E A +
Sbjct: 267 SIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 365 M 365
M
Sbjct: 326 M 326
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 228/416 (54%), Gaps = 40/416 (9%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N LI + ++ S F +M++ TY V+ ACG+ + +G VH +
Sbjct: 129 WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVL 188
Query: 129 KVGLDSDKYIGNTLLRMYAACK-------------------------------EIDVAKA 157
+ G+ D+ + N L+ MYA C ++D A+
Sbjct: 189 ESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARD 248
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F+ MP RD ++W++MI G+V DAL+ F M++ + T+VS+V+AC L
Sbjct: 249 LFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGA 308
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ GE Y G+++DV +G AL++MYSKCG +E+A VF M ++ +WT +I G
Sbjct: 309 LETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILG 368
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
LA NGRG AI +F +M++ PD ++F +L+AC+H GLVD+G+ +F M YNI P
Sbjct: 369 LAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISP 428
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
T+ HYGC++D+LGRAG ++EA I MP +PN+ I + L +CR +G + +G+L
Sbjct: 429 TVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYG-----NSEIGEL 483
Query: 398 ----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LL+L+P+ Y+L +++ + S W + I +KG+ K PGCS +++N
Sbjct: 484 AAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMN 539
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 19/341 (5%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+++P + A+ +I Y + ++++ F M +R D FT VV AC +
Sbjct: 247 RDLFDHMPERDTI-AWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQ 305
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G + ++G+ D ++GN L+ MY+ C I+ A VF++M RD +W+++
Sbjct: 306 LGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAI 365
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNG 232
I G +A+ +F+RM A ++P+ VT V +++ACT V G E S
Sbjct: 366 ILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYN 425
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNGRGNYAISLF 291
+ V L+++ + G +++A + M K N W +++ GN I
Sbjct: 426 ISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASC--RVYGNSEIGEL 483
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI---KPTMEHYGC-MVD 347
A L PD+ + +LS + N + ++ R+ I K + GC M++
Sbjct: 484 AAERLLELDPDNSTAYILLSN------MYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIE 537
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQV 387
M G+I E R+ P L + L RN G V
Sbjct: 538 M---NGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYV 575
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 194/430 (45%), Gaps = 55/430 (12%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L RSL + +P A +++ A+ E++ + ML G RPD +T+P ++
Sbjct: 4 ALSRARSLLDGIPHRRGRAASSSVSGHGAE-----EAVAGYVRMLAGGARPDAYTFPSLL 58
Query: 109 KACGRCLLIGIGGS-----VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
KA + + +H+ + K G++S+ + ++L+ MYAA + A+AV E
Sbjct: 59 KAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAAC 118
Query: 164 VRD----VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+ V W+++I+G + F M A+ +VT VS++SAC ++
Sbjct: 119 LATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLL 178
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G +H + +G+ D + ALV+MY++CG ++ A+ +F M+ +++ SWT +ISGL
Sbjct: 179 LGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLV 238
Query: 280 DNGRGNYAISLFAKM---------------IQTG----------------LKPDSISFSA 308
+G+ + A LF M +Q G ++ D + +
Sbjct: 239 RSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVS 298
Query: 309 ILSACSHLGLVDEGKNYFDEMARVY----NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+++AC+ LG ++ G E AR+Y IK + ++DM + G IE A + ++
Sbjct: 299 VVTACAQLGALETG-----EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKD 353
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
M LG N G+ D ++L L+ +V + + +G D
Sbjct: 354 MHNRDKFTWTAIILGLAVN-GRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDK 412
Query: 425 AAELMVAINQ 434
E +++ +
Sbjct: 413 GREFFLSMTE 422
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 248/421 (58%), Gaps = 22/421 (5%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT 95
C IS F LS +LH +F +P P +N +IR A +S ++ + M +
Sbjct: 43 CAISSF--GDLSYALH----IFRYIPY-PSTNDWNAVIRGTALSSDPANAVFWYRAMAAS 95
Query: 96 -GL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
GL R D T F +KAC R L +HS + + G ++D + TLL YA ++D
Sbjct: 96 NGLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLD 155
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSAC 212
+A+ +F+EMP D+ SW+++IAGF P+DA+ F RMK+ N PN+VT+ + AC
Sbjct: 156 LAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLAC 215
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSW 271
+ L ++ GES+H Y V L +V + +++MY+KCG ++KA+ VF MR +K+L +W
Sbjct: 216 SQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI A +G G+ A+ LF K+ ++G+ PD++S+ A+L AC+H GLV++G F+ M +
Sbjct: 276 NTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ 335
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
++P ++HYG MVD+LGRAG ++EAY I+ ++P PN V+ ++ LGACR +G V
Sbjct: 336 -RGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDV---- 389
Query: 392 DNLGKLLLKLEPELG----ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ +L + E+G ++VL ++V + WD + A+ ++ + K PG S+++
Sbjct: 390 -EMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIE 448
Query: 448 V 448
+
Sbjct: 449 I 449
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 239/410 (58%), Gaps = 14/410 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF-----------DEMLKTGLR 98
L+ R LF+ +P + ++ ++I Y + + E++ LF DE++ G+
Sbjct: 137 LNDARKLFDEIP-ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVG 195
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
D+ V+ AC R + + VH L K G + +GNTL+ YA C EI V++ V
Sbjct: 196 VDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKV 255
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLIN 217
F+ M DV SW+S+IA + +A +F M K N+VTL +++ AC
Sbjct: 256 FDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGA 315
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G+ IH V LE ++ +GT++V+MY KCG VE A K F+ ++ KN++SWT+M++G
Sbjct: 316 LQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAG 375
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
+G G A+ +F +MI+ G+KP+ I+F ++L+ACSH GL+ EG ++F++M ++++P
Sbjct: 376 YGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEP 435
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
+EHY CMVD+LGRAG ++EAY +I+ M +P+ ++ S LGACR H V L + +
Sbjct: 436 GIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV-ELGEISARK 494
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
L KL+P YVL +++ + +G WD + + + GL K PG S V+
Sbjct: 495 LFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 176/317 (55%), Gaps = 13/317 (4%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
RS+F ++++N++I +A++ S++++ F M K L P+ T+P +K+C
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H F G SD ++ + L+ MY+ C ++ A+ +F+E+P R+VVSW+SM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 174 IAGFVACDSPSDALKVFHRMKLANESP-----------NSVTLVSLVSACTSLINVRAGE 222
I+G+V + +A+ +F L +E+ +SV L ++SAC + E
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
+H AV G E +A+G L++ Y+KCG + + KVF+ M E ++ SW +I+ A NG
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 283 RGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
A SLF+ M++ G ++ ++++ SA+L AC+H G + GK D++ ++ ++ +
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVV 337
Query: 342 YGCMVDMLGRAGLIEEA 358
+VDM + G +E A
Sbjct: 338 GTSIVDMYCKCGRVEMA 354
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 48/297 (16%)
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
V SW+S+IA F AL F M+ + PN T + +C+SL ++ AG+ IH
Sbjct: 51 VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
A V G D+ + +AL++MYSKCG++ A K+F+ + E+N+ SWT MISG N R
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170
Query: 287 AISLFAKMI-----------QTGLKPDSISFSAILSACSHL------------------- 316
A+ LF + + G+ DS+ ++SAC+ +
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230
Query: 317 GLVDEGKNYFDEMARVYNIKPT------MEH-----YGCMVDMLGRAGLIEEAYHIIRNM 365
G + G D A+ I + ME + ++ + + GL EA+ + +M
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290
Query: 366 ----PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
NAV L + L AC H L + + ++K+E E N V+ S+ +
Sbjct: 291 VKRGEVRYNAVTLSAVLLAC-AHSGALQIGKCIHDQVVKMELE--DNLVVGTSIVDM 344
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 232/411 (56%), Gaps = 19/411 (4%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
N+P+ + + +I Y++ CS E++ LF +M+ +G P+ T V+ AC
Sbjct: 368 NIPLD--VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 425
Query: 119 IGGSVHSLIFK----------VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RD 166
G +H+ K G D D + N L+ MY+ C+ A+++F+++P+ R+
Sbjct: 426 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 485
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESI 224
VV+W+ MI G +DALK+F M + +PN+ T+ ++ AC L +R G+ I
Sbjct: 486 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545
Query: 225 HSYAVVNGLELDVA--LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
H+Y + + A + L++MYSKCG V+ A VF+ M +K+ SWT M++G +G
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 605
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY 342
RG+ A+ +F KM + G PD I+F +L ACSH G+VD+G +YFD M+ Y + P EHY
Sbjct: 606 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 665
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLE 402
C +D+L R+G +++A+ +++MP EP AV+ + L ACR H V + L K L+++
Sbjct: 666 ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK-LVEMN 724
Query: 403 PELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
E +Y L +++ + +G W A + + + G+ K PGCSWV+ G+A
Sbjct: 725 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTA 775
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 10/278 (3%)
Query: 62 VTP-PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
VTP P +N LIR + K +I + ML+ G RPD+FT P V+KACG G
Sbjct: 122 VTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCG 181
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR---DVVSWSSMIAGF 177
+ H LI G +S+ +I N L+ MY+ C ++ A +F+E+ R DV+SW+S+++
Sbjct: 182 SAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAH 241
Query: 178 VACDSPSDALKVFHRMKL------ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
V + AL +F +M L NE + +++V+++ AC SL V + +H A+ N
Sbjct: 242 VKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN 301
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G DV +G AL++ Y+KCG +E A KVFN+M K++ SW M++G + +G A LF
Sbjct: 302 GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELF 361
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
M + + D ++++A+++ S G E N F +M
Sbjct: 362 KNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S + +G ++ Y AC D A V E + V W+ +I + A+ V RM
Sbjct: 94 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 153
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
A P+ TL ++ AC L + R G + H NG E +V + ALV MYS+CG +
Sbjct: 154 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 213
Query: 254 EKAFKVFNLMREKNLQ---SWTIMISGLADNGRGNYAISLFAKMI------QTGLKPDSI 304
E+A +F+ + ++ + SW ++S + A+ LF+KM T + D I
Sbjct: 214 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 273
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
S IL AC L V + K R P + ++D + GL+E A +
Sbjct: 274 SIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 365 M 365
M
Sbjct: 333 M 333
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 242/434 (55%), Gaps = 6/434 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI--SLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H +K L +T + + I+T+ S S+ +F+ T L +N+++ AY
Sbjct: 222 QVHAKIVKHGLASDTTVCNA-IITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLV 280
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E+ +LF EM G PD +TY V+ A G G S+H L+ K GL+ I
Sbjct: 281 NNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPI 340
Query: 139 GNTLLRMY--AACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
N+L+ MY + K +D A +FE + +D VSW+S++ GF DALK F M+
Sbjct: 341 SNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQ 400
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ +++ +C+ L ++ G+ +H + +G E + + ++L+ MYSKCG +E A
Sbjct: 401 YVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDA 460
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
K F+ + + +W +I G A +GRG A+ LF M +K D I+F A+L+ACSH+
Sbjct: 461 RKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHI 520
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV+EG ++ M Y I P MEHY CM+D+LGRAG ++EA +I MP EP+A++ ++
Sbjct: 521 GLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKT 580
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR G + L + LL+LEPE YVL +S+ W+ A + + ++G
Sbjct: 581 LLGACRTCGDI-ELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERG 639
Query: 437 LNKVPGCSWVKVND 450
+ KVPG SW++V +
Sbjct: 640 VKKVPGWSWIEVKN 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 171/373 (45%), Gaps = 37/373 (9%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++NT+I + +++ M + G D +++ ++K + +G VHS++
Sbjct: 67 SWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMM 126
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+G + + + G+ LL MYA C+ ++ A VF+ + +R+ V+W+++I+G+ A
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAF 186
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ M+L + T L++ + +H+ V +GL D + A++ Y
Sbjct: 187 WLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 248 SKCGHVEKAFKVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
S+CG +E A +VF+ + ++L +W M++ N + A LF +M G +PD ++
Sbjct: 247 SECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTY 306
Query: 307 SAILSAC---SHLG--------LVDEG----------------KNYFDEMARVYNIKPTM 339
++++SA SH G ++ G K++ M NI ++
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 340 EH-----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV--LYLDD 392
E+ + ++ ++GL E+A NM ++ + +F R+ + L L
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 393 NLGKLLLK--LEP 403
+ L+LK EP
Sbjct: 427 QVHVLVLKSGFEP 439
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 47/309 (15%)
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H L K G + Y N ++ YA C EI +A +F E RD VSW++MIAGFV +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL+ MK + + + S++ + V G+ +HS V G E +V G+AL
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF------------ 291
++MY+KC VE AF+VF + +N +W +ISG A G A L
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 292 -----------------------AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
AK+++ GL D+ +AI++A S G +++ + FD
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 329 MARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT---EPN-----AVILRSFLGA 380
++ + M+ EEA+ + M EP+ +VI +F G+
Sbjct: 262 AIETRDLVT----WNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGS 317
Query: 381 CRNHGQVLY 389
+ G+ L+
Sbjct: 318 HQGQGKSLH 326
>gi|125563703|gb|EAZ09083.1| hypothetical protein OsI_31349 [Oryza sativa Indica Group]
Length = 503
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 240/458 (52%), Gaps = 10/458 (2%)
Query: 1 MISRHIETLIQ---LSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLF 57
M + H+ LI + TV HL Q+H L + + + L SL
Sbjct: 1 MAALHLHALIAGGGAATTVPHLRQIHAHLLTSGRLPSLGPVLLRRLISLPNPHLHLAHRL 60
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL- 116
+P L +N L+ A + + LF + + GLRPD T P V+KA R
Sbjct: 61 LLSLPSPSLDLFNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPG 120
Query: 117 -IGIGGSVHSLIFKVGLDSDK-YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ + GSVHS K GL S Y+ N L+ Y+AC +++ A VF+EMP R VVSW++ +
Sbjct: 121 SLPVVGSVHSEAVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTAL 180
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+++F M A P+ T V ++SA L N+ G+ H V L+
Sbjct: 181 TACAGNGHHELCVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLD 240
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ + LGTA V MYSKCG V A ++F M +N+ +WT MI G A NG A+ LF +M
Sbjct: 241 MTLQLGTAAVNMYSKCGAVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRM 300
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ + P+ ++F +L ACSH GLVDEG+ +F EM VY I P M HY MVD+LGR GL
Sbjct: 301 KLSKIIPNYVTFLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGL 360
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ---VLYLDDNLGKLLLKLEPELGANYVL 411
++EAY + MP E + V+ R+ L AC+ H + +D GK LL+LEP NYV+
Sbjct: 361 LQEAYDFVVGMPVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGK-LLELEPRRSGNYVM 419
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ G+WD AA+ + + G+ KV G S V+V
Sbjct: 420 VSNIYCEIGSWDEAAKARRVMREGGMKKVAGESCVEVG 457
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 209/385 (54%), Gaps = 36/385 (9%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
D FT+PFV+K+ L + +G VH LI ++GL D Y+ +L+ +Y C EI+ A VF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK------------------LANES-- 199
+ M +RDV SW++++AG+ AL +F RM LA ++
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 200 -------------PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
PN VT++S++ AC L + G IH A GL + ++ AL M
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312
Query: 247 YSKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
Y+KCG + A F+ + EKNL +W MI+ A G G A+S F +MIQ G++PD I
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F+ +LS CSH GLVD G YF+ M+ Y+I P +EHY C+ D+LGRAG + EA ++
Sbjct: 373 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 432
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP I S L ACR H + L + + + L LEPE NYVL +++ + +G W
Sbjct: 433 MPMPAGPSIWGSLLAACRKH-RNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQE 491
Query: 425 AAELMVAINQKGLNKVPGCSWVKVN 449
+L + +G K PGCSW+++N
Sbjct: 492 VDKLRAIVKSQGTKKSPGCSWIEIN 516
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ PV L ++N LI Y K + ++I ++ M G++PD+ T +V +C
Sbjct: 210 ARKVFDESPVRD-LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI-------------------- 152
+ G + + + GL + N L+ M++ C +I
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 153 -----------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
DV++ +F++M +DVV W++MI G V DAL +F M+ +N P+
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T++ +SAC+ L + G IH Y L L+VALGT+LV+MY+KCG++ +A VF+
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH 448
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
++ +N ++T +I GLA +G + AIS F +MI G+ PD I+F +LSAC H G++
Sbjct: 449 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++YF +M +N+ P ++HY MVD+LGRAGL+EEA ++ +MP E +A + + L C
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R HG V L + K LL+L+P YVL + + W+ A +N++G+ K+P
Sbjct: 569 RMHGNV-ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIP 627
Query: 442 GCSWVKVN 449
GCS ++VN
Sbjct: 628 GCSSIEVN 635
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 208/416 (50%), Gaps = 40/416 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTP 64
+L++ K + HL Q+ + L + SR I +LS S L ++ + + P
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE-NP 116
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL---RPDNFTYPFVVKACGRCLLIGIGG 121
+F++N IR ++++ ES L+ +ML+ G RPD+FTYP + K C L +G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+ + K+ L+ ++ N + M+A+C +++ A+ VF+E PVRD+VSW+ +I G+
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A+ V+ M+ P+ VT++ LVS+C+ L ++ G+ + Y NGL + + L
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG------------------- 282
AL++M+SKCG + +A ++F+ + ++ + SWT MISG A G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 283 ------------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
RG A++LF +M + KPD I+ LSACS LG +D G +
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYI 415
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
Y++ + +VDM + G I EA + + T N++ + +G HG
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 41/351 (11%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+H ++ K ++ T +IS + L L +R LF+++ + +N +I
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGL---LDVSRKLFDDME-EKDVVLWNAMIGG 363
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+ +++ LF EM + +PD T + AC + + +G +H I K L +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+G +L+ MYA C I A +VF + R+ ++++++I G S A+ F+ M
Sbjct: 424 VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 483
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A +P+ +T + L+SAC ++ G S +M S+
Sbjct: 484 AGIAPDEITFIGLLSACCHGGMIQTGRDYFS------------------QMKSR------ 519
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
FNL L+ ++IM+ L G A L M ++ D+ + A+L C
Sbjct: 520 ----FNL--NPQLKHYSIMVDLLGRAGLLEEADRLMESM---PMEADAAVWGALLFGCRM 570
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD-MLGRAGLIEEAYHIIRNM 365
G V+ G+ ++ + P+ ++D M G A + E+A R M
Sbjct: 571 HGNVELGEK---AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 250/452 (55%), Gaps = 16/452 (3%)
Query: 9 LIQLSKTVHHLHQL------HTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLP 61
++ L V HL +L H +K LD + I + + + S+ + +F+ +
Sbjct: 368 IVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMR 427
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+ + ++ T+I YA++S E+I F K G++ D +++AC I +
Sbjct: 428 IKDHV-SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLK 486
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VHS + GL D + N ++ +Y C E+ A +FE + +D+V+W+SM+ F
Sbjct: 487 QVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+A+ +F +M A P+SV LV ++ A L ++ G+ IH + + ++ A+ +
Sbjct: 546 LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVS 605
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MYS CG + A KVF+ + K++ WT MI+ +G G AI +F +M++TG+ P
Sbjct: 606 SLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSP 665
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +SF A+L ACSH LVDEGK Y D M Y ++P EHY C+VD+LGR+G EEAY
Sbjct: 666 DHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKF 725
Query: 362 IRNMPTEPNAVILRSFLGACR---NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
I++MP EP +V+ + LGACR NH + D LL+LEP+ NYVL ++V +
Sbjct: 726 IKSMPLEPKSVVWCALLGACRIHKNHELAMIATDK----LLELEPDNPGNYVLVSNVFAE 781
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
G W+ E+ + ++GL K P CSW+++ +
Sbjct: 782 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGN 813
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT----GLRPDNFTYPFVVKAC 111
LF+ +P +F++N LI A + + E++ ++ M + G PD T V+KAC
Sbjct: 115 LFDGMPART-VFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKAC 173
Query: 112 G-----RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVR 165
G RC G VH L K GLD + N L+ MYA C +D A VFE M R
Sbjct: 174 GAEGDGRC-----GSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGR 228
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIH 225
DV SW+S I+G V +AL +F RM+ S NS T V ++ C L + G +H
Sbjct: 229 DVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELH 288
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+ + G E ++ AL+ MY++CG V+ A +VF + +K+ SW M+S N
Sbjct: 289 AALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYA 347
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
AI F +M+Q G PD ++LSA HLG + G+
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 185/393 (47%), Gaps = 34/393 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L +K+ LD +T + + + + + L +F + + ++N+ I +
Sbjct: 184 EVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQN 243
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+E++ LF M G +++T V++ C + G +H+ + K G + +
Sbjct: 244 GMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC- 302
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N LL MYA C +D A VF E+ +D +SW+SM++ +V ++A+ F M +
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +VSL+SA L + G +H+YAV L+ D+ + L++MY KC VE + +V
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARV 422
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL--- 316
F+ MR K+ SWT +I+ A + R + AI F + G+K D + +IL ACS L
Sbjct: 423 FDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSI 482
Query: 317 -------------GLVD--------EGKNYFDEMARVYNI-----KPTMEHYGCMVDMLG 350
GL+D + E+ NI K + + MV+
Sbjct: 483 SLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA 542
Query: 351 RAGLIEEA---YHIIRNMPTEPNAVILRSFLGA 380
GL+ EA + + N +P++V L LGA
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGA 575
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 13/244 (5%)
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G D ++ LL MY C + A +F+ MP R V SW+++I ++ +A+ V
Sbjct: 87 LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 190 FHRMK----LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ M+ +A +P+ TL S++ AC + + R G +H AV +GL+ + ALV
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206
Query: 246 MYSKCGHVEKAFKVFNLMRE-KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG ++ A +VF MR+ +++ SW ISG NG A+ LF +M G +S
Sbjct: 207 MYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSY 266
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +L C+ L ++ G+ + + +NI+ ++ M R G ++ A +
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN-----ALLVMYARCGWVDSALRV 321
Query: 362 IRNM 365
R +
Sbjct: 322 FREI 325
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 248/421 (58%), Gaps = 22/421 (5%)
Query: 36 CIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT 95
C IS F LS +LH +F +P P +N +IR A +S ++ + M +
Sbjct: 43 CAISSF--GDLSYALH----IFRYIPY-PSTNDWNAVIRGTALSSDPANAVFWYRAMAAS 95
Query: 96 -GL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
GL R D T F +KAC R L +HS + + G ++D + TLL YA ++D
Sbjct: 96 NGLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLD 155
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSAC 212
+A+ +F+EMP D+ SW+++IAGF P+DA+ F RMK+ N PN+VT+ + AC
Sbjct: 156 LAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLAC 215
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSW 271
+ L ++ GES+H Y V L+ +V + +++MY+KCG ++KA+ VF MR +K+L +W
Sbjct: 216 SQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
MI A +G G+ A+ LF K+ ++G+ PD++S+ A+L AC+H GLV++G F+ M +
Sbjct: 276 NTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ 335
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
++P ++HYG MVD+LGRAG ++EAY I+ ++P PN V+ ++ LGACR +G V
Sbjct: 336 -RGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDV---- 389
Query: 392 DNLGKLLLKLEPELG----ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ +L + E+G +VL ++V + WD + A+ ++ + K PG S+++
Sbjct: 390 -EMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIE 448
Query: 448 V 448
+
Sbjct: 449 I 449
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 241/430 (56%), Gaps = 36/430 (8%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
SL + P+ ++ T I Y K+ +++ F +M + + P++ T+ ++ AC
Sbjct: 45 SLRHTTKYNDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHY 104
Query: 115 LL---IGIGGSVHSLIFKVGLD-SDKYIGNTLLRMYAACKEIDVAKAVFEEM-------- 162
I G ++H+ + K+GLD +D +G L+ MYA C ++ A+ F++M
Sbjct: 105 PSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSW 164
Query: 163 -----------------------PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
PV++ +SW+++I GFV D +AL+ F M+L+ +
Sbjct: 165 NTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVA 224
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VT++++++AC +L + G +H + +V + +L++MYS+CG ++ A +V
Sbjct: 225 PDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQV 284
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M ++ L SW +I G A NG + A+S F M + G KPD +S++ L ACSH GL+
Sbjct: 285 FDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLI 344
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG F+ M RV I P +EHYGC+VD+ RAG +EEA ++++NMP +PN VIL S L
Sbjct: 345 GEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLA 404
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR G + L +N+ L++L+ +NYVL +++ + G WD A ++ + ++G+ K
Sbjct: 405 ACRTQGNI-GLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQK 463
Query: 440 VPGCSWVKVN 449
PG S ++++
Sbjct: 464 KPGFSSIEID 473
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 257/459 (55%), Gaps = 32/459 (6%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L K++ N C+ + FI + +L +F+ + + ++N +I A+ +
Sbjct: 404 QLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAV-SWNAIIAAHEQN 462
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+++ + ML++G+ PD +T+ V+KAC G L G+ +H+ I K+G+ S+ YI
Sbjct: 463 EERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGM--EIHTTIVKLGMASNPYI 520
Query: 139 GNTLLRMYAACKEIDVAKAV-------------FEEMP--------VRD------VVSWS 171
G++L+ MY+ C ID A+ + + E P ++D +VSW+
Sbjct: 521 GSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWN 580
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
++I+G+V DA + F+RM +P+ T +++ C +L ++ G+ IH++ +
Sbjct: 581 AIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK 640
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
L+ DV + + LV+MYSKCG++ + +F ++ +W MI G A +G G AI LF
Sbjct: 641 ELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLF 700
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
M+ + P+ +F ++L AC+H+GLV+ G +YF M + Y + P +EHY MVD+LG+
Sbjct: 701 ESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGK 760
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+G +E+A +I+ MP E + VI R+ L AC+ + + + LL+L+P+ + Y+L
Sbjct: 761 SGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYIL 820
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + +G WD A+EL A+ L K PGCSWV++ D
Sbjct: 821 LSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRD 859
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 173/321 (53%), Gaps = 6/321 (1%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F +P T + ++N+++ + +T ++ES+K+F EM ++G+ DN ++ ++K C
Sbjct: 138 FEMMP-TRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILEN 196
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+G +H + ++G D+D G+ LL MYA CK +D + VF MP ++ +SWS++IAG
Sbjct: 197 YKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAG 256
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
V + LK+F M+ + S++ +C +L ++R G +H++A+ + D
Sbjct: 257 CVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKD 316
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ TA ++MY+KC +++ A ++F++ NLQS+ MI+G + G A+ LF K+ +
Sbjct: 317 GIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSK 376
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+ L D IS S L AC+ + + EG +A N + +DM G+ ++
Sbjct: 377 SSLGFDEISLSGALRACATVKGLSEGLQ-LHGLATKSNFSRNICVANAFIDMYGKCEALD 435
Query: 357 EAYHIIRNMPTEP----NAVI 373
EA + M + NA+I
Sbjct: 436 EACRVFDEMGRKDAVSWNAII 456
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 33/330 (10%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +YN +I Y++ ++ LF ++ K+ L D + ++AC + G +H
Sbjct: 348 LQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHG 407
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K + + N + MY C+ +D A VF+EM +D VSW+++IA + S
Sbjct: 408 LATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSK 467
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L + M + P+ T S++ AC ++ G IH+ V G+ + +G++LV+
Sbjct: 468 TLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVD 526
Query: 246 MYSKCGHVEKAFKVFNL-----------------------MREKNLQ----SWTIMISGL 278
MYSKCG +++A K+ N ++++ +Q SW +ISG
Sbjct: 527 MYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGY 586
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+ A F +M++ G+ PD ++S +L C++L + GK A V +
Sbjct: 587 VMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIH---AHVIKKELQ 643
Query: 339 MEHYGC--MVDMLGRAGLIEEAYHIIRNMP 366
+ Y C +VDM + G + ++ + P
Sbjct: 644 YDVYICSTLVDMYSKCGNLHDSRLMFEKAP 673
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+K+F EM K G+ Y V+K+C + +G +H+ K D + L M
Sbjct: 267 LKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDM 326
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
YA C + A+ +F+ ++ S+++MI G+ D+ AL +F ++ ++ + ++L
Sbjct: 327 YAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISL 386
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
+ AC ++ + G +H A + ++ + A ++MY KC +++A +VF+ M
Sbjct: 387 SGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGR 446
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
K+ SW +I+ N + +++ M+++G++PD +F ++L AC+
Sbjct: 447 KDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG---------- 496
Query: 326 FDEMARVYNIKPTMEHYG---------CMVDMLGRAGLIEEAYHI 361
D + I T+ G +VDM + G+I+EA I
Sbjct: 497 -DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKI 540
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD-SDKYIGNTLLRMYAACK 150
M+ +G RP F V C L I G ++ G+ D N ++ YAA
Sbjct: 75 MIISGFRPTVF-----VSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASN 129
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A FE MP RDVVSW+SM++GF+ +++KVF M + ++ + ++
Sbjct: 130 DMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILK 189
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
C+ L N + G IH A+ G + DV G+AL++MY+KC ++++F VF M +KN S
Sbjct: 190 VCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWIS 249
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
W+ +I+G N + + +F +M + G+ ++++L +C+ L
Sbjct: 250 WSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATL 295
>gi|242058803|ref|XP_002458547.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
gi|241930522|gb|EES03667.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
Length = 483
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 252/436 (57%), Gaps = 12/436 (2%)
Query: 28 KTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAY-AKTSCSIES 85
+ +L +T ++S F L + SL LF +LP P +F +N+L+R+ A +CS
Sbjct: 49 EPALLRSTAVVSAFFLACGRLRSLDPALVLFASLP-RPHVFVFNSLLRSLPAAPACS--P 105
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+ LF + G+RP+ +T+P ++ + + +VHS + K G D ++ N LL
Sbjct: 106 LPLFRHFIGLGVRPNRYTFPLMLTSLSSLHELS---AVHSQVAKSGFARDLHVRNALLAS 162
Query: 146 YAAC-KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
YAAC ++ A+ +F+EMP DVV+W++MI + AL F RM A+ +PN VT
Sbjct: 163 YAACDPDLGHAEQLFDEMPSPDVVAWTTMITAYRNRGRSFHALSTFRRMFAASVAPNRVT 222
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
+VS + AC + V G IH Y G ELDV LGTALV+MY KCGHV + +VF+ M
Sbjct: 223 MVSALGACAAHGAVDTGIWIHQYVQKQGWELDVVLGTALVDMYGKCGHVVEGVRVFSEMT 282
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
E+N+ +W +I A G A+ F +M G++PD+++ +L AC+H GLVD G+
Sbjct: 283 ERNVCTWNSIIGAFALEQNGEMALRWFYRMKADGVRPDAVTLICVLYACTHAGLVDIGRK 342
Query: 325 YFDEMAR-VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
F+ + + Y +P ++H+GCM+D+L R+G +++A+ ++ MP++P+AVI L C+
Sbjct: 343 IFNLIVQGKYGFQPGIKHFGCMIDLLSRSGHLDDAFRVLEAMPSQPDAVIWGLLLQGCKV 402
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
G L + + L++LEP ++YV A++ + +G W A E++ + +KGL K G
Sbjct: 403 RGDT-DLSEYVTMRLVELEPGNASHYVTLANLYAETGRWLEAEEVLKGMKEKGLAKDAGW 461
Query: 444 SWVKVNDGSAEEMSKE 459
S +++ D ++ +S E
Sbjct: 462 S-LRLEDSLSKYISDE 476
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 237/409 (57%), Gaps = 32/409 (7%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I YA++ +++ LF EM GL + T +V A RC I +H +
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL++++Y+ N L+ MY+ +I +K +F+ M RD+VSW+++I +V C SDAL
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405
Query: 188 KVFHRMKLANES----------------PNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+ H M+ E PNS+TL++++ C SL + G+ IH+YA+ N
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
L V +G+ALV+MY+KCG + A +VF+ M +N+ +W ++I +G+G ++ LF
Sbjct: 466 LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF 525
Query: 292 AKMIQTG-----LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
M+ G +KP ++F A+ ++CSH G+VDEG + F +M + I+P +HY C+V
Sbjct: 526 EDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIV 585
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKL----LLKL 401
D++GRAG +EEAY ++ MP+ + V S LGACR +Y + +G++ LL+L
Sbjct: 586 DLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACR-----IYHNIEIGEIAAENLLQL 640
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+P++ ++YVL +++ S +G WD A L + G+ K PGCSW++ D
Sbjct: 641 QPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGD 689
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 6/270 (2%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS--DKYIGNTLLRMYAAC 149
M+ +G PDNF +P V+KA + +G +H+ +FK G S I NTL+ MY C
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
+ A VF+ + RD VSW+S+I+ + A+K F M + P+S TLVS+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 210 SACTSLINVRA---GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK 266
AC++L G+ IH G AL+ MY+K G ++ A + L ++
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF 326
+L +W MIS + N R A+ M+ G+KPD ++F+++L ACSHL L+ GK
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
R ++ +VDM G +E
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVE 269
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 163/340 (47%), Gaps = 22/340 (6%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +N++I ++++ +E++ M+ G++PD T+ V+ AC L+ G +H+
Sbjct: 181 LVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHA 240
Query: 126 LIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + + ++G+ L+ MY C +++ + VF+ + R + W++MIAG+ +
Sbjct: 241 YALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDE 300
Query: 185 DALKVFHRMK-LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
AL +F M+ A N+ T+ S+V A + E IH Y + GLE + L AL
Sbjct: 301 KALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNAL 360
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ + ++F+ M ++++ SW +I+ GR + A+ L +M
Sbjct: 361 IDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTY 420
Query: 296 --------QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMV 346
Q KP+SI+ +L C+ L + +GK R N+ + G +V
Sbjct: 421 DGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIR--NLLASQVTVGSALV 478
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
DM + G + A + MP N + + A HG+
Sbjct: 479 DMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK 517
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 15/307 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIGGSVH 124
++N++I A + +IK F ML G P +FT + AC + +G +H
Sbjct: 80 SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIH 139
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
F+ G + N L+ MYA +D AK++ RD+V+W+SMI+ F +
Sbjct: 140 GCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFM 198
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTAL 243
+AL M L P+ VT S++ AC+ L +R G+ IH+YA+ + + + +G+AL
Sbjct: 199 EALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSAL 258
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPD 302
V+MY CG VE VF+ + ++ + W MI+G A + A+ LF +M GL +
Sbjct: 259 VDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSN 318
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEA 358
+ + S+I+ A + E Y IK +E ++DM R G I+ +
Sbjct: 319 ATTMSSIVPAYVRCEGISR-----KEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTS 373
Query: 359 YHIIRNM 365
I +M
Sbjct: 374 KRIFDSM 380
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 243/434 (55%), Gaps = 6/434 (1%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H H + + FL L I++ + L R +F+ +P T + + LI ++
Sbjct: 110 HAHLVDSHFLDNHLVLQNIIVNMYAKCG---CLDDARRMFDEMP-TKDMVTWTALIAGFS 165
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ + +++ LF +ML+ G +P++FT ++KA G + G +H+ K G S Y
Sbjct: 166 QNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVY 225
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+G+ L+ MYA C +D A+ F+ MP + VSW+++I+G AL + +M+ N
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN 285
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P T S++SAC S+ + G+ +H++ + +GL+L +G L++MY+K G ++ A
Sbjct: 286 FQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAK 345
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ + + ++ SW M++G A +G G + F +M++ G++P+ ISF +L+ACSH G
Sbjct: 346 RVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
L+DEG YF E+ + Y ++P + HY VD+LGR GL++ A IR MP EP A + +
Sbjct: 406 LLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
LGACR H + + L + +L+P +L +++ + +G W A++ + + G+
Sbjct: 465 LGACRMH-KNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGV 523
Query: 438 NKVPGCSWVKVNDG 451
K P CSWV++ +
Sbjct: 524 KKQPACSWVEIENA 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALV 244
AL + R L P+ L+ CT L V G +H++ V + L+ + L +V
Sbjct: 74 ALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG ++ A ++F+ M K++ +WT +I+G + N R A+ LF +M++ G +P+
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+ S++L A +D G Y + ++ +VDM R G ++ A
Sbjct: 191 TLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 365 MPTE 368
MPT+
Sbjct: 250 MPTK 253
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 234/402 (58%), Gaps = 3/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F +P L A+N++I+ Y S +++ + M+ G RP T ++
Sbjct: 259 LEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC R + G +H + + +++D Y+ +L+ +Y C E ++A+ VF + S
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ MI+ +++ + A++V+ +M P+ VT S++ AC+ L + G+ IH
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+ LE D L +AL++MYSKCG+ ++AF++FN + +K++ SWT+MIS +G+ A+
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
F +M + GLKPD ++ A+LSAC H GL+DEG +F +M Y I+P +EHY CM+D+L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 350 GRAGLIEEAYHIIRNMP-TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAG + EAY II+ P T NA +L + AC H + L D + +LL++ P+ +
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLE-HSLGDRIARLLVENYPDDAST 616
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y++ ++ + +WD A + + + + GL K PGCSW++++D
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 205/384 (53%), Gaps = 9/384 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYAKT 79
+HTL +K+ + + S + +L F SL F+ +P + ++NT+I + ++
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNL-FENSLQVFDEMP-ERDVASWNTVISCFYQS 186
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ++++LF M +G P++ + + AC R L + G +H K G + D+Y+
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ MY C ++VA+ VF++MP + +V+W+SMI G+VA +++ +RM +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ TL S++ AC+ N+ G+ IH Y + + + D+ + +L+++Y KCG A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ ++ +SW +MIS G A+ ++ +M+ G+KPD ++F+++L ACS L +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++GK ++ ++ ++DM + G +EA+ I ++P + + V +
Sbjct: 427 EKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMIS 484
Query: 380 ACRNHGQ---VLYLDDNLGKLLLK 400
A +HGQ LY D + K LK
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLK 508
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNT 71
+K++ + +H L L + + I + H + R +F N + ++ +N+
Sbjct: 17 TKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNS 76
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y+K S +++++F +L + PD+FT+P V+KA G +G +H+L+ K
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D + ++L+ MYA + + VF+EMP RDV SW+++I+ F AL++F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ + PNSV+L +SAC+ L+ + G+ IH V G ELD + +ALV+MY KC
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+E A +VF M K+L +W MI G G + + +MI G +P + ++IL
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 311 SACSH 315
ACS
Sbjct: 317 MACSR 321
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 244/440 (55%), Gaps = 21/440 (4%)
Query: 21 QLHTLFLKTSLDHN----TCIISRFIL-----TSLSISLHFTRSLFNNLPVTPPLFAYNT 71
Q+H L K L +N T ++ ++ T L I F RS +NL ++
Sbjct: 338 QIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKI---FRRSQNHNL------IMWSA 388
Query: 72 LIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I A++ C ++++LF E ++ GL D+ V++AC L G +H L K+
Sbjct: 389 VISNCAQSGCPTKALELFYEFKMEDGL-ADSGILVAVLRACSSLTLKPEGMQIHGLATKM 447
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G SD ++G+ L+ +YA C+++ +K VF + +D+VSW+++I+G+ + +ALK F
Sbjct: 448 GFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAF 507
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+L PN+VT+ ++S C L + + +H Y + GL V + +L+ Y+KC
Sbjct: 508 RDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKC 567
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + + F M E+N SW +I G+ + R + I LF KM+ +G+KPD ++F+AIL
Sbjct: 568 GDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAIL 627
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
SACSH G VDEG YF M +N+KP +E Y CMVD+LGRAG + +AY +I MP P+
Sbjct: 628 SACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPD 687
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
I S LG+C+NHG + L + + + KL P VL A++ G +++
Sbjct: 688 DRIWGSLLGSCKNHGDEI-LAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRS 746
Query: 431 AINQKGLNKVPGCSWVKVND 450
I GL K PGCSW++V++
Sbjct: 747 EIKDMGLKKKPGCSWIEVDN 766
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 183/370 (49%), Gaps = 7/370 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNL----PVTPPLFA 68
+++ H ++H + +K+ LD ++S I + S+ ++FN++ V
Sbjct: 225 QSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVI 284
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I Y C +++ LF +M+ G++PD T + C L I G +H LIF
Sbjct: 285 WNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIF 344
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K GL ++ + LL MY C ++ +F +++ WS++I+ P+ AL+
Sbjct: 345 KFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALE 404
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F+ K+ + +S LV+++ AC+SL G IH A G DV +G+ALV++Y+
Sbjct: 405 LFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYA 464
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC + + KVF + +K+L SW +ISG A + + A+ F M ++P++++ +
Sbjct: 465 KCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIAC 524
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
ILS C+HL ++ K + R + T+ ++ + G I + + MP E
Sbjct: 525 ILSVCAHLSVMTLCKEVHGYLIR-QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMP-E 582
Query: 369 PNAVILRSFL 378
N V S +
Sbjct: 583 RNDVSWNSII 592
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 192/396 (48%), Gaps = 46/396 (11%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTS-LSISLHFTRSLFNNLPV----TPPL- 66
SKT HH+ L I+TS +S SL F + FN P+ + PL
Sbjct: 25 SKTPHHISNL------------------VIVTSPVSCSLRFQK--FNYNPIQKWSSKPLS 64
Query: 67 ----------FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTY-PFVVKACGRCL 115
FA N +IR Y + ++I ++ +ML G++ + F Y P ++KA G
Sbjct: 65 TKIQTFVSVSFA-NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLC 123
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + K+G+ D + N+LL MY C ++ A +FE+MP D+VSW++MI+
Sbjct: 124 DVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMIS 183
Query: 176 GFVACDSPSDALKVFHRMKLA-NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF + +L F M PN V VS + +C+SL ++ G IH V +GL+
Sbjct: 184 GFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLD 243
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREK-----NLQSWTIMISGLADNGRGNYAIS 289
++ L ++L+EMY KCG ++ A +FN + +K N W +MISG NG + A+
Sbjct: 244 VEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALL 303
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF KM+ G+KPD + ++ S CS + GK + + + +K + ++DM
Sbjct: 304 LFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFK-FGLKNNIRVETALLDMY 362
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G + I R N ++ + + C G
Sbjct: 363 LKCGDMGTGLKIFRRSQNH-NLIMWSAVISNCAQSG 397
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 250/483 (51%), Gaps = 54/483 (11%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-SLFNNLPV-----TPPLFA 68
T+ L Q+HT + F+L L +S + T +L N V P
Sbjct: 46 TIKKLKQIHTQIIVNGFSQKN-----FLLVKL-LSFYITSGNLLNAHKVFERIENPSTTV 99
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +IR ++++ + ++L++ M++ P+ FTY F++ C R L+ G VH +
Sbjct: 100 WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVV 159
Query: 129 KVGLDSDKYIGNTLLRMYA----------------------------------ACKEIDV 154
G ++ ++ +L+ +YA C ++D
Sbjct: 160 ANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDG 219
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F+EMP R+VVSW++MIAG AL +FH M+ A + V LV+ +SAC
Sbjct: 220 ARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAE 279
Query: 215 LINVRAGESIHSYAV----VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
L +++ G IHSY L V+L +L+ MY+ CG ++KA+KVF M++++ S
Sbjct: 280 LGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS 339
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGL---KPDSISFSAILSACSHLGLVDEGKNYFD 327
WT MI+G A G A+ +F M + G +PD I+F +L ACSH G VD+G+++F+
Sbjct: 340 WTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFE 399
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M + + I P +EHYGCMVD+L RAG ++EA+ + +MP +PN + + LG CR H
Sbjct: 400 CMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNA 459
Query: 388 LYLDDNLGKLLLKLEPELGANY-VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
KL+L+L+P+ A Y VL ++V + + W A + + + G+ K G SWV
Sbjct: 460 ELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWV 519
Query: 447 KVN 449
++N
Sbjct: 520 QIN 522
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 235/428 (54%), Gaps = 1/428 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
Q+H L +K+ N C+ + + L V+ ++N +I A+ +
Sbjct: 334 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 393
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
+++ LF ML++G+ PD FTY V+KAC + G +H+ I K + D ++G
Sbjct: 394 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI 453
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY+ C ++ A+ + + + + VVSW+++I+GF +A K F +M P
Sbjct: 454 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ T +++ C +L+ V G+ IH+ + L+ D + + LV+MYSKCG+++ +F
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 573
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
++ +W M+ G A +G G A+ +F M +KP+ +F A+L AC H+GLV+
Sbjct: 574 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 633
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+G +YF M Y + P +EHY C+VD++GR+G + +A +I MP E +AVI R+ L
Sbjct: 634 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSX 693
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
C+ HG V + + +L+LEPE A YVL +++ + +G W+ +L + GL K
Sbjct: 694 CKIHGNV-EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 752
Query: 441 PGCSWVKV 448
PGCSW+++
Sbjct: 753 PGCSWIEI 760
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 188/414 (45%), Gaps = 41/414 (9%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+ LFN+LP L +YN +I YA++ IE++ +F + K+GL D + +AC
Sbjct: 266 SNQLFNSLP-NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA 324
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
G VH L K S+ + N +L MY C + A VFEEM RD VSW++
Sbjct: 325 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 384
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IA + L +F M + P+ T S++ AC + G IH+ + +
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 444
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ LD +G AL++MYSKCG +EKA K+ + + E+ + SW +ISG + + A F+
Sbjct: 445 MGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFS 504
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR--------------------- 331
KM++ G+ PD+ +++ IL C++L V+ GK ++ +
Sbjct: 505 KMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCG 564
Query: 332 -------VYNIKPTMEH--YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLG 379
++ P + + MV + GL EEA I M E PN + L
Sbjct: 565 NMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLR 624
Query: 380 ACRNHGQVL----YLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
AC + G V Y L L+P+L +Y + SG A EL+
Sbjct: 625 ACGHMGLVEKGLHYFHSMLSN--YGLDPQL-EHYSCVVDIMGRSGQVSKALELI 675
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 81/413 (19%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP------LFAY-- 69
H + T F T N C+I +I S L F +F+ +P LF Y
Sbjct: 65 HARMILTEFKPTVFVTN-CLIQMYIKCS---DLGFAFKVFDGMPQRDTVSWNAMLFGYAG 120
Query: 70 -------NTLIRAYAKTSCSIESIKLFD-EMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
L A T C + ++LFD M + G D T+ V+K+C G G
Sbjct: 121 RGDIGVAQKLFDAMPGTGCGV--VELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGI 178
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAAC--------------KEI--------------- 152
+H L K+G D D G+ LL MYA C KE+
Sbjct: 179 QIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHAL 238
Query: 153 -------------------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
D + +F +P ++ S++++I G+ D +AL
Sbjct: 239 KTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEAL 298
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F ++ + + V+L AC + G +H ++ + + ++ + A+++MY
Sbjct: 299 GMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMY 358
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG + +A VF M ++ SW +I+ NG +SLF M+Q+G++PD ++
Sbjct: 359 GKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYG 418
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG--CMVDMLGRAGLIEEA 358
++L AC+ ++ G + R+ + ++ + ++DM + G++E+A
Sbjct: 419 SVLKACAGWQALNCGMEIHN---RIIKSRMGLDSFVGIALIDMYSKCGMMEKA 468
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 158/408 (38%), Gaps = 91/408 (22%)
Query: 51 HFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKA 110
H +R LF P F +N ++ KT I F T + F++ F +
Sbjct: 4 HTSRHLF------PIRFFFNFQSKSPFKTL----PISPFSSYQATPTKKKTFSHIF--QE 51
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
C + G H+ + ++ N L++MY C ++ A VF+ MP RD VSW
Sbjct: 52 CSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSW 111
Query: 171 SSMIAGFVACDSPSDALKVFH---------------RMKLANESPNSVTLVSLVSACTSL 215
++M+ G+ A K+F RM + T ++ +C+SL
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSL 171
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKC------------------------- 250
+ G IH AV G + DV G+AL++MY+KC
Sbjct: 172 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGAL 231
Query: 251 ---GHVEK--------------------------AFKVFNLMREKNLQSWTIMISGLADN 281
GH K + ++FN + NLQS+ +I G A +
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+G A+ +F + ++GL D +S S AC+ + EG ++K +
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ-----VHGLSMKSLCQS 346
Query: 342 YGC----MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
C ++DM G+ G + EA + M + +AV + + A +G
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQNG 393
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 231/403 (57%), Gaps = 3/403 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
L +F +P + A+N++I Y I I+LF M G++P T +
Sbjct: 257 QLEMAIEVFEQMP-NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTL 315
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + + G VH I + + D ++ ++L+ +Y C +++ A+ +F+ MP V
Sbjct: 316 MACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTV 375
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI+G+V DAL++F M + P+++T S+++AC+ L + G IH+
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLI 435
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V L + + AL++MY+KCG VE+AF VF + E++L SWT MI+ +GR A+
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LFA+M+Q+ +KPD ++F AILSACSH GLVD+G +F++M VY I P +EHY C++ +
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITL 555
Query: 349 LGRAGLIEEAYHIIRNMPT-EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
LGRAG + EAY I+++ P + +L + ACR H L L + + L+ +P+ +
Sbjct: 556 LGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKN-LDLGVEIAENLIDKDPDDSS 614
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y++ +++ + G WD + + GL K PGCSW+++N+
Sbjct: 615 TYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINE 657
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 188/356 (52%), Gaps = 3/356 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNT 71
SK++ LH + L ++ + I +S +L + +++F+ + + N
Sbjct: 16 SKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNG 75
Query: 72 LIRAYAKTSCSIESIKLFDE-MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y + E++ LFD+ M L+PD++TYP V+KACG + +G +H+ + K
Sbjct: 76 LMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKE 135
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL D +G++L+ MYA C E + A +F+EMP +DV W+++I+ + +AL+ F
Sbjct: 136 GLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYF 195
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ P+SVT+ + +S+C L+++ G IH V +G +D + ALV+MY KC
Sbjct: 196 GMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKC 255
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G +E A +VF M K + +W MI+G G G I LF +M G+KP + ++ L
Sbjct: 256 GQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTL 315
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
ACS + EGK + R I+P + ++D+ + G +E A I + MP
Sbjct: 316 MACSQSAQLLEGKFVHGYIIR-NRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 182/332 (54%), Gaps = 3/332 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+ +P + +NT+I Y ++ E+++ F M + G PD+ T + +C R L
Sbjct: 163 LFDEMP-DKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H + G D ++ L+ MY C ++++A VFE+MP + VV+W+SMI
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ +++F RM P TL S + AC+ + G+ +H Y + N ++
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D+ L ++L+++Y KCG VE A +F LM + SW +MISG G+ A+ LF +M
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMS 401
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
++ ++PD+I+F+++L+ACS L +++G+ + + N+ G ++DM + G +
Sbjct: 402 KSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVE-RNLGNNEVVMGALLDMYAKCGAV 460
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
EEA+ + + +P E + V S + A +HG+V
Sbjct: 461 EEAFGVFKCLP-ERDLVSWTSMITAYGSHGRV 491
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 35/212 (16%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L+ L+ A + +++ G+ +H V GL+ DV + L+ +Y C + A VF+++
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 265 EK-NLQSWTIMISGLADNGRGNYAISLFAK-MIQTGLKPDSISFSAILSACS-------- 314
+ +++G N + A+ LF K M LKPDS ++ ++L AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 315 ---HLGLVDEGK-----------------NYFDEMARVYNIKPTME--HYGCMVDMLGRA 352
H LV EG N F+ ++++ P + + ++ ++
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 353 GLIEEA---YHIIRNMPTEPNAVILRSFLGAC 381
G EEA + ++R EP++V + + + +C
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSC 217
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 250/437 (57%), Gaps = 3/437 (0%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
+H +H +K L N+ I + + + + + R +F+ L + + +I
Sbjct: 239 LHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVD-IVLWTAMIV 297
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + +++++LF + P++ T V+ A + + +G SVH++ K+G
Sbjct: 298 GYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTME 357
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ N L+ MYA C+ + A ++F + ++DVV+W+SM+AG+ +++L +F+RM+
Sbjct: 358 SDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMR 417
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ SP+++++V+ +SAC L ++ G+ H+YA+ ++ + TAL+ +YSKC +
Sbjct: 418 MQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLP 477
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +VFN M ++N +W+ MI G G +I LF +M++ + P+ + F++ILSACS
Sbjct: 478 SAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACS 537
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H G+V GK YFD MAR +NI P+M+HY CMVD++ RAG +EEA I+NMP + +
Sbjct: 538 HTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVW 597
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
SFL C+ H ++ + ++ + K + L PE YVL +++ + G WD + + + +
Sbjct: 598 GSFLHGCKLHSRLEFGEEAIKK-MAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQE 656
Query: 435 KGLNKVPGCSWVKVNDG 451
+GL K+PGCS V +G
Sbjct: 657 QGLVKLPGCSSVGHENG 673
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 178/332 (53%), Gaps = 5/332 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F+ +P + ++ +++ + + E + LF+EM + + P +T V+
Sbjct: 173 LENARKVFDRVP-ERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLA 231
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + G +H + K GL ++ +I +LL MYA C++++ A+ VF+E+ D+V
Sbjct: 232 ACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVL 291
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W++MI G+ P DAL++F K + PNSVT+ +++SA L ++ G S+H+ V
Sbjct: 292 WTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGV 351
Query: 230 VNG-LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
G +E DV + ALV+MY+KC + +A +F + K++ +W M++G ++NG N ++
Sbjct: 352 KLGTMESDV-VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESL 410
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M G+ PD+IS LSAC L + GK F A Y + ++++
Sbjct: 411 VLFNRMRMQGISPDAISVVNALSACVCLADLHIGKG-FHTYAIKYAFMSNIYVNTALLNL 469
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+ + A + +M T+ N+V + +G
Sbjct: 470 YSKCADLPSAQRVFNDM-TDRNSVTWSAMIGG 500
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT--GLRPDNFTYPFVVKA 110
R + + P P +AY ++ +++ L +M + + +KA
Sbjct: 74 ARGVLDGTP-RPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKA 132
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
C R G +H + K G +D ++ N+L+ MYA +++ A+ VF+ +P R+VVSW
Sbjct: 133 CVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSW 191
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+SM++G + + L +F+ M+ N P+ T+VS+++AC L + G IH +
Sbjct: 192 TSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIK 251
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
GL + + +L++MY+KC VE A +VF+ + ++ WT MI G N R A+ L
Sbjct: 252 YGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQL 311
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
F + P+S++ + ++SA + L + G++
Sbjct: 312 FLHKKFVSIVPNSVTIATVISASAQLRHLPLGRS 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH--RMKLANES 199
LL YAA ++ A+ V + P D ++ M+ V S +DA+ + R + +
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
V L + AC + R G +H V G D + +LV+MY+K G +E A KV
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKV 179
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ + E+N+ SWT M+SG NG + LF +M Q + P + ++L+AC+ LG +
Sbjct: 180 FDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGL 239
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+G+ + + Y + ++DM + +E+A +
Sbjct: 240 HQGRWIHGSVIK-YGLSTNSFISASLLDMYAKCEKVEDARRVF 281
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 229/435 (52%), Gaps = 41/435 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKT-------SCSIESIKLFDEMLKTGLRPDNFTYPF 106
R +F +P+ + ++N+LI Y +SIKLF EM+ +PD T
Sbjct: 170 RKVFEEMPLRD-VVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITS 227
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++ACG + G VH + G + D N L+ MYA C + ++ VF M +D
Sbjct: 228 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 287
Query: 167 VVSWSSMIAGFVACDSPSDALKVFH-------------------------------RMKL 195
VSW+SMI ++ D+LKVF RM+
Sbjct: 288 SVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 347
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+P+ T++S++ C+ L R G+ IH GLE DV +G L+EMYSKCG +
Sbjct: 348 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 407
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+F+VF LM+ K++ +WT +IS G G A+ F +M G+ PD ++F AI+ ACSH
Sbjct: 408 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 467
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
GLV+EG NYF M + Y I+P +EHY C+VD+L R+ L+++A I +MP +P++ I
Sbjct: 468 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWG 527
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ L ACR G + + + + +++L P+ YVL +++ + G WD + +I +
Sbjct: 528 ALLSACRMSGDT-EIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 586
Query: 436 GLNKVPGCSWVKVND 450
GL K PGCSW+++ +
Sbjct: 587 GLKKDPGCSWMEIQN 601
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 208/414 (50%), Gaps = 48/414 (11%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT--RSLFNNLPVTPP---LFAY 69
T LH+LH+L + L H+ ++ I + HF S F+ + P ++ +
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLI----AKYAHFRDPTSSFSVFRLASPSNNVYLW 83
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N++IRA E++ L+ E + L+PD +T+P V+ AC L + S+H +
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G SD YIGN L+ MY ++D A+ VFEEMP+RDVVSW+S+I+G+ A ++AL++
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 190 FHR-----MKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+++ M++ N+ P+ +T+ S++ AC L ++ G+ +H Y + +G E D L
Sbjct: 204 YYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 263
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR-------------------- 283
+ MY+KCG++ + +VF+ M+ K+ SW MI+ NG+
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323
Query: 284 -----------GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
N + + ++M G+ PD + +IL CS L +GK + ++
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
++ + +++M + G + ++ + + M T+ + V + + AC +G+
Sbjct: 384 -GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE 435
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 260/486 (53%), Gaps = 45/486 (9%)
Query: 9 LIQLSKTVHHLHQLHT------LFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
L+Q +K V + Q+H L K N+ +I R++ R LF+ +
Sbjct: 136 LLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNS-LIKRYVDNG---CFECARQLFDEMS- 190
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
+ +YNT+I +AK + ++LF +M GL PD+FT ++ CG+ +G S
Sbjct: 191 DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKS 250
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE---------------------- 160
VH+ I K S+ + N LL MY C E+ +A+ VF+
Sbjct: 251 VHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGE 310
Query: 161 ---------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
++P RD+VSW+S+I+G+ +F RM N P+ VT+V+L+SA
Sbjct: 311 LELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISA 370
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
+ + G IH AV +++ G+AL++MY KCG +E+AF +FN + EK++ +W
Sbjct: 371 VAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTW 430
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
T MI+G A +G GN A+ LF+ M Q KP+ ++F ++L+ACSH GLVDEG F M +
Sbjct: 431 TTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKK 489
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y+I+P +EHYGC+VD+L R+G + +A +I MP EP+ I + L ACR H + +
Sbjct: 490 RYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAE 549
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
L + LLKLEPE Y+L ++V + G W + + +N +G+ K+ GCS V V DG
Sbjct: 550 RALME-LLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAV-DG 607
Query: 452 SAEEMS 457
+ +
Sbjct: 608 MVHDFT 613
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 69/396 (17%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LFN+ P L+ +NT+I + ++ ++ ++ ML+ G PD T+ ++++
Sbjct: 87 LFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVA 144
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ H+L+F + L ++Y+ N+L++ Y + A+ +F+EM R+VVS+++MI
Sbjct: 145 EVK-QIHCHALVFGL-LSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMIL 202
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--------- 226
GF + L++FH M+ P+ T++ L+ C L + G+S+H+
Sbjct: 203 GFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSS 262
Query: 227 -----------YAVVNGLEL-----------DVALGTALVEMYSKCGHVEKAFKVFNLMR 264
Y N L+L D ++ Y+K G +E A +FN +
Sbjct: 263 NLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIP 322
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+++ SW +ISG A NG LF +M +KPD ++ ++SA + +G +D+G+
Sbjct: 323 TRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGR- 381
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP------------------ 366
+ +A K ++DM + G IE A+ I +P
Sbjct: 382 WIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHG 441
Query: 367 ---------------TEPNAVILRSFLGACRNHGQV 387
T+PN V S L AC + G V
Sbjct: 442 FGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLV 477
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 251/446 (56%), Gaps = 33/446 (7%)
Query: 37 IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG 96
IIS L+S SL LF L F +NT+IRA+A+ + ++I LF ML +
Sbjct: 48 IISFCALSSNQFSLSHAYRLFLGLR-HRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSN 106
Query: 97 LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID--- 153
P+N+TY F+ KAC + +G + H K+G + ++ N L+ M+A +D
Sbjct: 107 FLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSAR 166
Query: 154 ----------------------------VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ + +F++MP R+ VSWS+MI G+V +
Sbjct: 167 KLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEE 226
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F+ M ++ PN +V ++AC SL + G IH Y N ++LD +G AL++
Sbjct: 227 ALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALID 286
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG +E A +F +R +++ +T +ISGLA++G+ A+ LF +M G+ P+ ++
Sbjct: 287 MYAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVT 346
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F ++L+ACS +GLVD+G F+ M+++Y +P ++HYGC+VD+LGRAG +EEA +++ M
Sbjct: 347 FVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEM 406
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P++ +L + L A R +G V L + + L +L + +V+ +++ + + WD
Sbjct: 407 PMKPDSYVLGALLNASRVYGDV-ELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEV 465
Query: 426 AELMVAINQKGLNKVPGCSWVKVNDG 451
A + + K + KVPGCS +KV+ G
Sbjct: 466 ARVRRGMGDKKVRKVPGCSLIKVDGG 491
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 230/389 (59%), Gaps = 2/389 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
+P L ++N +I A++ + E+I F +M+ TGL PD T+ ++ ACG + I G
Sbjct: 423 SPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQ 482
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACD 181
+HS I K+GLD + + N+LL MY C + A VF+++ ++VSW+++++ +
Sbjct: 483 IHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHK 542
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+ ++F M + P+++T+ +++ C L ++ G +H ++V +GL +DV++
Sbjct: 543 QAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSN 602
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
L++MY+KCG ++ A VF + ++ SW+ +I G A G G+ A++LF M G++P
Sbjct: 603 RLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQP 662
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +++ +LSACSH+GLV+EG ++++ M I PT EH CMVD+L RAG + EA +
Sbjct: 663 NEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF 722
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ M P+ + ++ L +C+ HG V + + + +LKL+P A VL +++ + GN
Sbjct: 723 IKKMGFNPDITMWKTLLASCKTHGNV-DIAERAAENILKLDPSNSAALVLLSNIHASVGN 781
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVND 450
W A L + Q G+ KVPG SW+ V D
Sbjct: 782 WKEVARLRNLMKQMGVQKVPGQSWIAVKD 810
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 3/339 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R F+ + + + ++ +I Y++ ++I ++ +ML++G PD T+ ++
Sbjct: 207 SLKDARKAFDTMQLRN-VVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSII 265
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC I +G +H + K G D N L+ MY +I A VF + +D++
Sbjct: 266 KACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLI 325
Query: 169 SWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
SW+SMI GF +AL +F M + PN S+ SAC SL+ G IH
Sbjct: 326 SWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGM 385
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
GL +V G +L +MY+K G + A + F + +L SW +I+ +D+G N A
Sbjct: 386 CAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEA 445
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
I F +M+ TGL PD I+F ++L AC +++G + ++ + ++
Sbjct: 446 IYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLT 504
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
M + + +A+++ +++ N V + L AC H Q
Sbjct: 505 MYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQ 543
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 49/409 (11%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTR-------SLFNNLPVTPPLFAYNTLI 73
QLH +K+ DH+ +I++ L S+ +TR S + T L ++ ++I
Sbjct: 279 QLHGHVIKSGYDHH--LIAQNALISM-----YTRFGQIVHASDVFTMISTKDLISWASMI 331
Query: 74 RAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+ + IE++ LF +M + G +P+ F + V AC L G +H + K GL
Sbjct: 332 TGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL 391
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ + G +L MYA + A F ++ D+VSW+++IA F ++A+ F +
Sbjct: 392 GRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQ 451
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M P+ +T +SL+ AC S + + G IHSY + GL+ + A+ +L+ MY+KC +
Sbjct: 452 MMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSN 511
Query: 253 VEKAFKVFNLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ AF VF + E NL SW ++S + + LF M+ + KPD+I+ + IL
Sbjct: 512 LHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILG 571
Query: 312 ACSHLGLVDEGKN-------------------YFDEMARVYNIK-----------PTMEH 341
C+ L ++ G D A+ ++K P +
Sbjct: 572 TCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVS 631
Query: 342 YGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ ++ + GL EA + +++N+ +PN V L AC + G V
Sbjct: 632 WSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLV 680
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N+ I K E++ F+ K + ++ ++ TY ++ AC + G +H I
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K D + N +L MY C + A+ F+ M +R+VVSW+ MI+G+ +DA+
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M + P+ +T S++ AC ++ G +H + + +G + + AL+ MY+
Sbjct: 245 MYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYT 304
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KPDSISFS 307
+ G + A VF ++ K+L SW MI+G G A+ LF M + G +P+ F
Sbjct: 305 RFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFG 364
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMP 366
++ SAC L + G+ A+ + GC + DM + G + A +
Sbjct: 365 SVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA--GCSLCDMYAKFGFLPSAIRAFYQIE 422
Query: 367 TEPNAVILRSFLGACRNHGQV 387
+ P+ V + + A + G V
Sbjct: 423 S-PDLVSWNAIIAAFSDSGDV 442
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 34/307 (11%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLI 73
T++ Q+H+ +K LD + + + S LH ++F ++ L ++N ++
Sbjct: 476 TINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAIL 535
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
A + + E +LF ML + +PDN T ++ C + +G VH K GL
Sbjct: 536 SACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLV 595
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
D + N L+ MYA C + A+ VF D+VSWSS+I G+ +AL +F M
Sbjct: 596 VDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMM 655
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
K PN VT + ++SAC+ + V G H Y +++ LG + C
Sbjct: 656 KNLGVQPNEVTYLGVLSACSHIGLVEEG--WHFYNT-----MEIELGIPPTREHVSC--- 705
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
M+ LA G A + KM G PD + +L++C
Sbjct: 706 --------------------MVDLLARAGCLYEAENFIKKM---GFNPDITMWKTLLASC 742
Query: 314 SHLGLVD 320
G VD
Sbjct: 743 KTHGNVD 749
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 257/478 (53%), Gaps = 44/478 (9%)
Query: 9 LIQLSKTVHHLHQLHT------LFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
L+Q +K V + Q+H L K N+ +I R++ R LF+ +
Sbjct: 71 LLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNS-LIKRYVDNG---CFECARQLFDEMS- 125
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
+ +YNT+I +AK + ++LF +M GL PD+FT ++ CG+ +G S
Sbjct: 126 DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKS 185
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE---------------------- 160
VH+ I K S+ + N LL MY C E+ +A+ VF+
Sbjct: 186 VHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGE 245
Query: 161 ---------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
++P RD+VSW+S+I+G+ +F RM N P+ VT+V+L+SA
Sbjct: 246 LELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISA 305
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
+ + G IH AV +++ G+AL++MY KCG +E+AF +FN + EK++ +W
Sbjct: 306 VAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTW 365
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
T MI+G A +G GN A+ LF+ M Q KP+ ++F ++L+ACSH GLVDEG F M +
Sbjct: 366 TTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKK 424
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLD 391
Y+I+P +EHYGC+VD+L R+G + +A +I MP EP+ I + L ACR H + +
Sbjct: 425 RYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAE 484
Query: 392 DNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
L + LLKLEPE Y+L ++V + G W + + +N +G+ K+ GCS V V+
Sbjct: 485 RALME-LLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVD 541
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 69/396 (17%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LFN+ P L+ +NT+I + ++ ++ ++ ML+ G PD T+ ++++
Sbjct: 22 LFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVA 79
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ H+L+F + L ++Y+ N+L++ Y + A+ +F+EM R+VVS+++MI
Sbjct: 80 EVK-QIHCHALVFGL-LSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMIL 137
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS--------- 226
GF + L++FH M+ P+ T++ L+ C L + G+S+H+
Sbjct: 138 GFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSS 197
Query: 227 -----------YAVVNGLEL-----------DVALGTALVEMYSKCGHVEKAFKVFNLMR 264
Y N L+L D ++ Y+K G +E A +FN +
Sbjct: 198 NLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIP 257
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+++ SW +ISG A NG LF +M +KPD ++ ++SA + +G +D+G+
Sbjct: 258 TRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGR- 316
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP------------------ 366
+ +A K ++DM + G IE A+ I +P
Sbjct: 317 WIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHG 376
Query: 367 ---------------TEPNAVILRSFLGACRNHGQV 387
T+PN V S L AC + G V
Sbjct: 377 FGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLV 412
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 220/397 (55%), Gaps = 10/397 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ PV +F + ++ Y + E+ +LFD M P+ + G
Sbjct: 265 RQLFDESPVHD-VFTWTAMVSGYIQNRMVEEARELFDRM------PERNEVSWNAMLAG- 316
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G + +F V + NT++ YA C +I AK +F++MP RD VSW++M
Sbjct: 317 -YVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 375
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+ +AL++F M+ N + S +S C ++ + G+ +H V G
Sbjct: 376 IAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 435
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E +G AL+ MY KCG +E+A +F M K++ SW MI+G + +G G A+ F
Sbjct: 436 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFES 495
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + GLKPD + A+LSACSH GLVD+G+ YF M + Y ++P +HY CMVD+LGRAG
Sbjct: 496 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAG 555
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L+EEA+++++NMP EP+A I + LGA R HG L + + +EPE YVL +
Sbjct: 556 LLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNT-ELAETAADKIFAMEPENSGMYVLLS 614
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + SG W +L V + KG+ KVPG SW+++ +
Sbjct: 615 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 651
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 54/365 (14%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVV---- 108
R LF +P + ++NT++ YA+ C ++ ++FD M K + + +V
Sbjct: 141 RELFERMP-ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKL 199
Query: 109 -KAC-------------GRCLLIGIGGSVHSLIFKVGLDS----DKYIGNTLLRMYAACK 150
+AC CLL G + + DS D NT++ YA
Sbjct: 200 EEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNG 259
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
EID A+ +F+E PV DV +W++M++G++ +A ++F RM NE + L V
Sbjct: 260 EIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ 319
Query: 211 A-----CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
L +V ++ ++ ++ Y++CG + +A +F+ M +
Sbjct: 320 GERVEMAKELFDVMPCRNVSTW-------------NTMITGYAQCGKISEAKNLFDKMPK 366
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
++ SW MI+G + +G A+ LF M + G + + SFS+ LS C+ + ++ GK
Sbjct: 367 RDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQL 426
Query: 326 FDEMARVYNIKPTMEHYGCMVD-----MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+ +K E GC V M + G IEEA + + M + + V + +
Sbjct: 427 HGRL-----VKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAG 479
Query: 381 CRNHG 385
HG
Sbjct: 480 YSRHG 484
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 150/359 (41%), Gaps = 42/359 (11%)
Query: 33 HNTCIISRFILTSLSISLHFTRSLFNNLPVT--PPLFAYNTLIRAYAKTSCSIESIKLFD 90
+N S F + S +S LP + + +N I +Y +T E++++F
Sbjct: 24 NNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFK 83
Query: 91 EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK 150
M R + +Y ++ R + ++F + D N +++ Y +
Sbjct: 84 RMP----RWSSVSYNAMISGYLRNGEFELA----RMLFDEMPERDLVSWNVMIKGYVRNR 135
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
+ A+ +FE MP RDV SW+++++G+ DA +VF RM N+ + L + V
Sbjct: 136 NLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQ 195
Query: 211 ------ACT--------SLI--NVRAGESIHSYAVVNGLEL-------DVALGTALVEMY 247
AC +L+ N G + +V + DV ++ Y
Sbjct: 196 NSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGY 255
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
++ G +++A ++F+ ++ +WT M+SG N A LF +M + + +S++
Sbjct: 256 AQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWN 311
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
A+L+ V+ K FD M N+ + M+ + G I EA ++ MP
Sbjct: 312 AMLAGYVQGERVEMAKELFDVMP-CRNVST----WNTMITGYAQCGKISEAKNLFDKMP 365
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 253/475 (53%), Gaps = 44/475 (9%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ Q+H + +L + I SR F S + +LF ++P P +F YN+
Sbjct: 36 TMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMP-NPNIFDYNS 94
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I +Y S +S+ +F +ML +RP++ T+ +VK+C + + V +L K G
Sbjct: 95 IITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSC---VTLSSLEQVFTLTMKSG 151
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
SD Y ++++ +++ I +A+ VF+E R+VV W+S+++G+ +C ++ VF
Sbjct: 152 NSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFD 211
Query: 192 RMKLANESPNSVT------------------------------------LVSLVSACTSL 215
+M NE+ NS LVS+++ACT +
Sbjct: 212 KMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVM 271
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
G+ IHSY NGLE D+ LGTAL++ Y+KCG V+ A KVF+ M K++ +W+ MI
Sbjct: 272 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMI 331
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
GLA NG A+ LF KM + G KP+ ++F +L+AC+H L E F M+ YNI
Sbjct: 332 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNI 391
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
P++EHYGC+VD+L R+G +++A I +M EP+ I S L C HG L +G
Sbjct: 392 TPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGH-YELGQKVG 450
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
K L++ +PE YVL A++ + G W+ +E+ + +G+ V G S+++++
Sbjct: 451 KYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQ 505
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 240/439 (54%), Gaps = 8/439 (1%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLS--ISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
+ ++H L K D + C + ++TS S +S+ + +F+ LP +N L+ Y
Sbjct: 179 VKKVHGLAFKLGFDSD-CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
++ +++ +F +M + G+ T V+ A I G S+H L K G SD
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N L+ MY K ++ A ++FE M RD+ +W+S++ C L +F RM +
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL----ELDVALGTALVEMYSKCGH 252
P+ VTL +++ C L ++R G IH Y +V+GL + + +L++MY KCG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+ A VF+ MR K+ SW IMI+G G A+ +F+ M + G+KPD I+F +L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH G ++EG+N+ +M VYNI PT +HY C++DMLGRA +EEAY + + P N V
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ RS L +CR HG L GK L +LEPE YVL ++V +G ++ ++ A+
Sbjct: 538 VWRSILSSCRLHGNK-DLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
Query: 433 NQKGLNKVPGCSWVKVNDG 451
Q+ + K PGCSW+ + +G
Sbjct: 597 RQQNVKKTPGCSWIVLKNG 615
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 166/310 (53%), Gaps = 5/310 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F YN LI + +++++ + EM G+ PD +T+P ++K L + VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPS 184
L FK+G DSD Y+G+ L+ Y+ ++ A+ VF+E+P R D V W++++ G+
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
DAL VF +M+ + T+ S++SA T ++ G SIH AV G D+ + AL+
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY K +E+A +F M E++L +W ++ G + ++LF +M+ +G++PD +
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 305 SFSAILSACSHLGLVDEGKNYFDEM--ARVYNIKPTMEH-YGCMVDMLGRAGLIEEAYHI 361
+ + +L C L + +G+ M + + N K + E + ++DM + G + +A +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 362 IRNMPTEPNA 371
+M + +A
Sbjct: 425 FDSMRVKDSA 434
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 15/312 (4%)
Query: 60 LPVTPPLFAY----NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LP P LFA + L Y+ S IE E K + T ++ C +
Sbjct: 21 LPRNPDLFAAIKPSSALASLYSTVSGQIE------ENPKRYEHHNVATCIATLQRCAQRK 74
Query: 116 LIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G +H + + G LD G +L+ MYA C + A VF RDV ++++I
Sbjct: 75 DYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALI 133
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+GFV SP DA++ + M+ P+ T SL+ ++ + + +H A G +
Sbjct: 134 SGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFD 192
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS-WTIMISGLADNGRGNYAISLFAK 293
D +G+ LV YSK VE A KVF+ + +++ W +++G + R A+ +F+K
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G+ + +++LSA + G +D G++ +A + ++DM G++
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRS-IHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 354 LIEEAYHIIRNM 365
+EEA I M
Sbjct: 312 WLEEANSIFEAM 323
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 259/463 (55%), Gaps = 16/463 (3%)
Query: 4 RHIETLIQL---SKTVHHLHQLHTLFLKTS--LDHNTCIISRFILTSLSI----SLHFTR 54
RH L++L S ++ QLH L+ + + + ++++ +L L+ L +
Sbjct: 19 RHCVALLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAKHLLFHLAALKAPPLRYAV 78
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++ + L +P F+ NT++R +A ++ ++ L L PD TYP +++AC R
Sbjct: 79 AVLSGLLPSPDPFSLNTVLRIFASSARPRVALALHRRHLAP---PDTHTYPPLLQACARL 135
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RDVVSWSS 172
L + G +H+ K GL S ++ N+L+ +Y AC + A VF+E+P R++VSW+S
Sbjct: 136 LALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNS 195
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
++ GF A P++ L VF M +P+ T+VS+++AC + + G +H + G
Sbjct: 196 VLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVG 255
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLF 291
L + G AL+++Y+KCG V+ A K+F M + + SWT +I GLA NG G A+ LF
Sbjct: 256 LVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLF 315
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+ M + L P I+ +L ACSH GLVD+G YFD+M Y I P +EH GCMVD+LGR
Sbjct: 316 SMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGR 375
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
AG +EEA++ I MP EPNAV+ R+ LGAC H + L + + L++L+P +YVL
Sbjct: 376 AGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKK-LEIGEAAWARLVELDPGHSGDYVL 434
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+++ + G W L + G+ K PG S V++ + E
Sbjct: 435 LSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYE 477
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +KT + + + I + S L R + L + ++ ++I Y +
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQH 424
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C +++ F EM K G+ PDN + C + G +H+ I+ G D I
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +YA C I A + FEEM ++D ++ + +++GF +ALKVF RM +
Sbjct: 485 NALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T VS +SA +L ++ G+ IH+ + G + +G AL+ +Y KCG E A
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M E+N SW +I+ + +GRG A+ LF +M + G+KP+ ++F +L+ACSH+GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M+ Y I+P +HY C++D+ GRAG ++ A I MP +A++ R+ L
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + + + K LL+LEP A+YVL ++ +++ W ++ + +G+ K
Sbjct: 725 ACKVHKNI-EVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 784 EPGRSWIEVKN 794
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 175/322 (54%), Gaps = 6/322 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ A+ + + +S +LF +M G+RP+ FTYP +++ C I +G +HSL
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G +SD Y+ L+ MY+ ++ A+ V E + +DVVSW+SMIAG+V + DAL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F M+ P+++ L S +S C + +R G IH+ V+G DV++ ALV +Y+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +AF F M K+ + ++SG A +G A+ +F +M Q+G+K + +F +
Sbjct: 493 RCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMP 366
LSA ++L + +GK ARV + E ++ + G+ G E+A M
Sbjct: 553 ALSASANLAEIKQGKQIH---ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM- 608
Query: 367 TEPNAVILRSFLGACRNHGQVL 388
+E N V + + +C HG+ L
Sbjct: 609 SERNEVSWNTIITSCSQHGRGL 630
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 165/319 (51%), Gaps = 6/319 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S +F ++P + +NTLI +A+ ++++F+EM +GL PD T ++
Sbjct: 193 SFRLAERVFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +HS +FK G+ SD + +LL +Y C +++ A +F +VV
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+ M+ F + + + ++F +M+ A PN T ++ CT + GE IHS +
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V G E D+ + L++MYSK G +EKA +V +++EK++ SWT MI+G + A+
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY--NIKPTMEHYGCMV 346
+ F +M + G+ PD+I ++ +S C+ + + +G AR+Y + + +V
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGYSGDVSIWNALV 488
Query: 347 DMLGRAGLIEEAYHIIRNM 365
++ R G I EA+ M
Sbjct: 489 NLYARCGRIREAFSSFEEM 507
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 3/331 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F L + ++ ++ YA+ E++ L+ +M + G+ P + V+ +C +
Sbjct: 97 RRVFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L G +H+ +K G S+ ++GN ++ +Y C +A+ VF +MP RD V+++++
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G C AL++F M+ + SP+ VT+ SL++AC SL +++ G +HSY G+
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D + +L+++Y KCG VE A +FN N+ W +M+ + LF +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G++P+ ++ IL C+ +D G+ ++ + M G ++DM + G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYG 394
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
+E+A ++ M E + V S + H
Sbjct: 395 WLEKARRVL-EMLKEKDVVSWTSMIAGYVQH 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 96 GLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
GL P +F ++AC G + +H+ GL + +GN L+ +Y+ +
Sbjct: 38 GLGPLDFA--CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ VFEE+ RD VSW +M++G+ +AL ++ +M A P L S++S+CT
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
G IH+ +G ++ +G A++ +Y +CG A +VF M ++ ++ +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A G G +A+ +F +M +GL PD ++ S++L+AC+ LG + +G + +
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-G 274
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
I G ++D+ + G +E A +I N N V+
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVL 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
M R S +AGF+A + P+ L +F + + + AC N R
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG--NGRRW 58
Query: 222 E---SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+ IH+ AV GL +G L+++YSK G V A +VF + ++ SW M+SG
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
A NG G A+ L+ +M + G+ P S++LS+C+ L +G+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 240/429 (55%), Gaps = 3/429 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH LK+ D N + S + + L +S F+ + + L +N ++ YA
Sbjct: 199 QLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVS-SRDLVLWNVMVSCYALN 257
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ +F M G++ DNFT+ ++ +CG G+G VH LI ++ D D +
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ MY+ + I+ A+ F+ M V+++VSW++MI G+ +A+++ M
Sbjct: 318 SALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTY 377
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ + L S++S+C +L +H+Y V NG E +++ ALV YSKCG + AF+
Sbjct: 378 PDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ + E ++ SWT ++ A +G + +F KM+ + ++PD ++F +LSAC+H G V
Sbjct: 438 FSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFV 497
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG +YF+ M VY I P EHY C++D+LGRAG ++EA +++ +MP EP + L +FLG
Sbjct: 498 LEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLG 557
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H V L + L +EP ANY L +++ + G+W A + + ++ K
Sbjct: 558 ACKVHRNV-GLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFK 616
Query: 440 VPGCSWVKV 448
VPGCSW+++
Sbjct: 617 VPGCSWMEI 625
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 170/338 (50%), Gaps = 15/338 (4%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKL----FDEMLKTGLRPDNFTYPFVVKAC 111
+F+ +P+ + ++NTLI + +C ++L F +M+ + P+ T +++A
Sbjct: 130 MFDEMPLKN-VVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRAS 188
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+GI +H I K G DS+ ++G+ L+ YA +D A++ F+E+ RD+V W+
Sbjct: 189 IELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWN 248
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
M++ + A VF M+L ++ T S++++C L + G+ +H +
Sbjct: 249 VMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRL 308
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
+LDV + +ALV+MYSK ++E A K F+ M KN+ SWT MI G +G G A+ L
Sbjct: 309 SFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLL 368
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVD 347
+MI+ PD ++ ++ILS+C +L E Y ++ E + +V
Sbjct: 369 QEMIRVYTYPDELALASILSSCGNLSATSEVVQ-----VHAYVVENGFEAFLSIANALVS 423
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G I A+ ++ EP+ + S +GA HG
Sbjct: 424 AYSKCGSIGSAFQSFSSV-AEPDIISWTSLMGAYAFHG 460
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 21/320 (6%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+ + K+G + + N +L +Y CKE + +F+EMP+++VVSW+++I G V
Sbjct: 92 GKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151
Query: 180 CDSPSDALKV----FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ +++ F +M L +PN +TL L+ A L +V +H + + +G +
Sbjct: 152 GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS 211
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ +G+ALV+ Y+K G V++A F+ + ++L W +M+S A NG A +F M
Sbjct: 212 NCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMR 271
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGL 354
G+K D+ +F++++++C LG GK + R+ +++ + +VDM +
Sbjct: 272 LEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA--SALVDMYSKNEN 329
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA-- 412
IE+A M + N V + + HG GK ++L E+ Y
Sbjct: 330 IEDARKAFDGMIVK-NIVSWTTMIVGYGQHGD--------GKEAMRLLQEMIRVYTYPDE 380
Query: 413 ---ASVSSLSGNWDTAAELM 429
AS+ S GN +E++
Sbjct: 381 LALASILSSCGNLSATSEVV 400
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 45/155 (29%)
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ G+ +H++ + G ++L ++ +Y KC K+F+ M KN+ SW +I G
Sbjct: 89 LHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICG 148
Query: 278 LADNGRGNYAISL-------FAKMIQTGLKPDSISFSAILSA---------CSHL----- 316
+ + GN +L F +M+ + P+ I+ + +L A C L
Sbjct: 149 VVE---GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFIL 205
Query: 317 ---------------------GLVDEGKNYFDEMA 330
GLVDE ++ FDE++
Sbjct: 206 KSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVS 240
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 226/389 (58%), Gaps = 18/389 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN--FTYPFVVKACGRCLLIGIGGSV 123
+F N LI Y K ++ LFDEM P++ T+ ++ C C G
Sbjct: 161 VFTRNALIHMYLKCGSITDAHLLFDEM------PNHNVVTWNTMITGCFGC------GDT 208
Query: 124 HSLIFKVGLDSDKYIG--NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
G ++ +G N ++ Y+ +D+A+++F+ MP RDVVSW SMI+ +V
Sbjct: 209 ERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNG 268
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
++AL++F M LA S +S+ + S++SAC + + G IH+Y + L DV L T
Sbjct: 269 RAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDT 328
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MY+KCG ++ AF VFN M KNL SW M+SGLA +G G A+ LF +M TG+ P
Sbjct: 329 ALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGP 388
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ I+F A+LSACSH+G V+EG F++M + +NI P +EHYGCMVD+L R GLI EA +
Sbjct: 389 NDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEM 448
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
IR MP EPN VI + L AC+ HG +D +G + KL E G YVL +++ +
Sbjct: 449 IRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVG-YIQKLVSEDGGCYVLLSNIFAAKSQ 507
Query: 422 WDTAAELMVAINQKGL-NKVPGCSWVKVN 449
W+ + + Q G+ K+PG S ++++
Sbjct: 508 WNEVEKTRKMMKQMGVEKKIPGYSSIELD 536
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 124/307 (40%), Gaps = 64/307 (20%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYA-ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+H+ + G D +I + YA + + ID A VF + D SW++MI GFV
Sbjct: 46 IHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAK 105
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+P AL+ + M+ N T + ++ A + + G +H V G DV
Sbjct: 106 NPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRN 165
Query: 242 ALVEMYSKCGHV-------------------------------EKAFKVFNLMREKNLQS 270
AL+ MY KCG + E+A ++F M E+N+ S
Sbjct: 166 ALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGS 225
Query: 271 WTI-------------------------------MISGLADNGRGNYAISLFAKMIQTGL 299
W MIS NGR A+ LF +M+ G+
Sbjct: 226 WNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGV 285
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
DSI ++ILSAC+ +G +D G+ M R ++ + +VDM + G I+ A+
Sbjct: 286 SADSIIITSILSACAQIGALDMGRWIHAYMKRS-KLRNDVFLDTALVDMYAKCGCIDTAF 344
Query: 360 HIIRNMP 366
+ MP
Sbjct: 345 GVFNTMP 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS-KCGH 252
K +++ N TL +L S C S +++ IH+ ++ G D + T VE Y+ +
Sbjct: 20 KFKSKNSNYKTLSALQS-CKSTEDLK---KIHAQLIITGQIKDTFIATKTVESYAVSARN 75
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
++ AF VF + + SWT MI G + A+ + M Q G++ + +F +L A
Sbjct: 76 IDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKA 135
Query: 313 CSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
EG+ ++ +V Y++ ++ M + G I +A+ + MP
Sbjct: 136 YGLRPSYQEGRIVHGKLVKVGFCYDVFTR----NALIHMYLKCGSITDAHLLFDEMPNH- 190
Query: 370 NAVILRSFLGAC 381
N V + + C
Sbjct: 191 NVVTWNTMITGC 202
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 231/393 (58%), Gaps = 4/393 (1%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F +P+ ++NTLI + + E++ +F+EML G+ PD T V+ +
Sbjct: 281 FKGMPIRNTK-SWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGD 339
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ G +H+ I + D + N+L+ MYA C ++ A+ +FE M RD+VSW++M+ G
Sbjct: 340 LQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCG 399
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+V A +F MK+ + + + LVSL+SAC+ L + G IHSY + D
Sbjct: 400 YVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTD 459
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ L +ALV+MY+KCG ++ A ++F+ MR K +W MI GLA G+G A++LF ++++
Sbjct: 460 MWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLK 519
Query: 297 -TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
KPD+I+ +L AC+H+G+VDEG +YF+ M + I P EHYGC+VD+LGRAGL+
Sbjct: 520 LRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTL-GIVPDNEHYGCIVDLLGRAGLL 578
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+EAY+ I+ MP +PN VI S L ACR H + + L +G+ ++ L P +VL +++
Sbjct: 579 DEAYNFIQKMPIQPNPVIWGSLLAACRVHHR-MELGKIIGQHIIDLAPNDVGAHVLISNL 637
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ G WD ++ + + + K PG S ++V
Sbjct: 638 HAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 189/359 (52%), Gaps = 17/359 (4%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLH---FTRSLFNNLPVTPPLFAYNTLI 73
+L +LH ++ L + C+ R + L + +S H + R +F+ + P +N +I
Sbjct: 33 NLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRM-AQPTAIVWNCMI 91
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-------GRCLLIGIGGSVHSL 126
R Y +++++LF M ++G+ PDN+T V ++ GR G +VH+L
Sbjct: 92 RGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGR----ATGDAVHAL 147
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ ++G SD ++ + L+ Y A K ++ A+ VFEEM RDVVSW+ MI+ F C +
Sbjct: 148 VQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNV 207
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L+ M+ PN +T++SL+SAC + V G +++ G+E DV + AL+ M
Sbjct: 208 LRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGM 267
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG + A+K F M +N +SW +I G NG+ A+++F +M+ G+ PD I+
Sbjct: 268 YVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITL 327
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++LS + LG + +G+ Y + + I + +++M + G + A I NM
Sbjct: 328 VSVLSTYAQLGDLQQGR-YLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENM 385
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 179/369 (48%), Gaps = 10/369 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L + + ++S I S S+ R +F + + ++ +I A+A+
Sbjct: 144 VHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMH-ERDVVSWTLMISAFAQCG 202
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++ DEM G +P+ T ++ ACG+ + G V++ + + G+++D I N
Sbjct: 203 QWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRN 262
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
L+ MY C + A F+ MP+R+ SW+++I GFV +AL +F M P
Sbjct: 263 ALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIP 322
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ +TLVS++S L +++ G +H+Y + + D+ L +L+ MY+KCG + A +F
Sbjct: 323 DVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF 382
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M +++ SWT M+ G + A +LF M + ++ ++LSACS LG +D
Sbjct: 383 ENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALD 442
Query: 321 EGK---NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+G+ +Y E + ++ M +VDM + G I+ A I M + +
Sbjct: 443 KGREIHSYIKEKS----VRTDMWLESALVDMYAKCGCIDAAAEIFSRM-RHKQTLAWNAM 497
Query: 378 LGACRNHGQ 386
+G + GQ
Sbjct: 498 IGGLASQGQ 506
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 238/433 (54%), Gaps = 11/433 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV-----TPPLFAYNTLIRA 75
Q+H L +KT L ++ IL +L SL ++L V ++ +I
Sbjct: 233 QIHCLAVKTGL-----LVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITG 287
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
YA++ S +++KLF M G+ P FT V+ AC + G VH+ + K+G +S
Sbjct: 288 YAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQ 347
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
YI L+ MYA + A+ F + D+V W+SMIAG+V DAL ++ RM++
Sbjct: 348 LYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQM 407
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
PN +T+ S++ AC++L G IH+ + GL L+V +G+AL MY+KCG++E+
Sbjct: 408 EGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEE 467
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
VF M E+++ SW MISGL+ NG G A+ LF +M Q KPD ++F +LSACSH
Sbjct: 468 GNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSH 527
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GLVD G YF M + + P +EHY CMVD+L RAG + EA I + + + R
Sbjct: 528 MGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWR 587
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
LGACRN+ + L G+ L++L + + YVL + + + G + + + +
Sbjct: 588 ILLGACRNY-RNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVR 646
Query: 436 GLNKVPGCSWVKV 448
G++K PGCSW+++
Sbjct: 647 GVSKEPGCSWIEL 659
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 3/348 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-TRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q H + +K + ++ + S + L F R +F+ +P + + T+I YA
Sbjct: 131 QQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEV-TWATMISGYAI 189
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ E+ ++F+ M + + F + V+ A + G +H L K GL I
Sbjct: 190 QRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSI 249
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ MYA C +D + VFE ++ ++WS+MI G+ ALK+F RM A
Sbjct: 250 LNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGI 309
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P+ TLV +++AC+ V G+ +H+Y + G E + + TALV+MY+K G E A K
Sbjct: 310 NPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARK 369
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
FN +++ +L WT MI+G NG A+SL+ +M G+ P+ ++ +++L ACS+L
Sbjct: 370 GFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAA 429
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
D+G+ + Y + + + M + G +EE + R MP
Sbjct: 430 FDQGRQIHARTIK-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP 476
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 193/400 (48%), Gaps = 27/400 (6%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFN----- 58
H + L + V HQ SL + ++ I L S S ++ SL N
Sbjct: 4 HPQNLSSFNSLVQFTHQ-------KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKC 56
Query: 59 -NLPVTPPLF---------AYNTLIRAYAKTSCSIES--IKLFDEMLKTGLRPDNFTYPF 106
+LP +F ++N LI Y++ + S ++LF M + P+ T+
Sbjct: 57 CHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSG 116
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+ A I G H++ K+ D ++G++LL MY + A+ VF+ MP R+
Sbjct: 117 IFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERN 176
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
V+W++MI+G+ +A +VF M+ E N S++SA V +G+ IH
Sbjct: 177 EVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHC 236
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
AV GL + +++ ALV MY+KCG ++ + +VF + +KN +W+ MI+G A +G +
Sbjct: 237 LAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
A+ LF++M G+ P + +L+ACS V+EGK + + ++ + + +V
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKL-GFESQLYIMTALV 355
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
DM ++G+ E+A N +P+ V+ S + +G+
Sbjct: 356 DMYAKSGVTEDARKGF-NYLQQPDLVLWTSMIAGYVQNGE 394
>gi|414591101|tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 237/437 (54%), Gaps = 18/437 (4%)
Query: 21 QLHTLFL-KTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L L T +L S +LH R +F+ +P +P + AYN L+ A
Sbjct: 27 QLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREVFDGMP-SPSMHAYNVLLAASPPD 85
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ++KL ++ +GLRPD ++ P V++AC +G +H ++GL ++ +
Sbjct: 86 A----AVKLVSRLVASGLRPDRYSVPAVLRACAESRDALLGSVLHGFAVRLGLLANVVVS 141
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL--AN 197
LL MYA + A VF+EMP RD V+W+ M+ G+ + L++F + ++ A
Sbjct: 142 GALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYARAGRSEETLELFRKAQIESAG 201
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHS-YAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+ + + S+++ C + G IH A D +G AL++MY KCG V+ A
Sbjct: 202 MARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLASSSDTVVGNALIDMYGKCGQVDGA 261
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
VF M EKN+ SW+ +IS +G G A+ ++ +M+ G+KP+ ++F +ILS+CSH
Sbjct: 262 QAVFASMEEKNVVSWSSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHS 321
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV +G+ F+ M +V+ ++PT +HY CMVD+LGRAG IEEA ++ MP EP A + +
Sbjct: 322 GLVSDGRRIFESMRKVHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMPMEPGASLWGA 381
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
L AC H V ++G++ L +LE + +NYV + G D+ A L +
Sbjct: 382 LLSACAIHNNV-----DVGEVAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAGLRSRM 436
Query: 433 NQKGLNKVPGCSWVKVN 449
+ G+ K PGCSWV V
Sbjct: 437 RELGMVKTPGCSWVHVK 453
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+S L +L+ C + + G +H+ A+V G D L T LV +YS+CG + +A +V
Sbjct: 4 PSSGRLSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREV 63
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH---- 315
F+ M ++ ++ ++++ + A+ L ++++ +GL+PD S A+L AC+
Sbjct: 64 FDGMPSPSMHAYNVLLAASPPDA----AVKLVSRLVASGLRPDRYSVPAVLRACAESRDA 119
Query: 316 -LGLVDEG-----------------------KNYFDEMARVYNIKPTME--HYGCMVDML 349
LG V G + RV++ P + + CMV
Sbjct: 120 LLGSVLHGFAVRLGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGY 179
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVI--LR---SFLGACRNHGQVL 388
RAG EE + R E + LR S L C + GQ++
Sbjct: 180 ARAGRSEETLELFRKAQIESAGMARDLRAVPSVLNVCADEGQLM 223
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 252/446 (56%), Gaps = 17/446 (3%)
Query: 21 QLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
QLH+L L+ + C+ + + +++ ++ + +F + + ++ LI Y
Sbjct: 275 QLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKND-VISWTALISGY 333
Query: 77 AKTSCSIESIK-LFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
++ + LF EML ++P++ TY ++KAC G VH+ + K +
Sbjct: 334 VQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAA 393
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN L+ MYA ++ A+ VF ++ R ++S + G D+P D HR+
Sbjct: 394 HTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--CITEGR---DAPLD-----HRIGR 443
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ +S T SL+SA S+ + G+ +H+ + G D + +LV MYS+CG++E
Sbjct: 444 MDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLED 503
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A + FN ++++N+ SWT MISGLA +G A+SLF MI TG+KP+ +++ A+LSACSH
Sbjct: 504 ACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSH 563
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GLV EGK YF M R + + P MEHY CMVD+L R+GL++EA I MP + +A++ +
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWK 623
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+ LGACR+H + + + K +++LEP A YVL +++ + +G WD A + A+
Sbjct: 624 TLLGACRSHDNI-EVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDN 682
Query: 436 GLNKVPGCSWVKVNDGSAEEMSKETA 461
LNK G SW++V + + E + +T+
Sbjct: 683 NLNKETGLSWMEVENTTHEFRAGDTS 708
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 205/404 (50%), Gaps = 23/404 (5%)
Query: 22 LHTLFLKTSLDHNTCIISRFILT--SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH L+ L +++ +LT S ++ R++F+ + + ++ + A+
Sbjct: 70 LHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARN 129
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGL-DSDKY 137
ES+ L EML++GL P+ +T V AC L +GG V L+ K+GL +D
Sbjct: 130 GAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIA 189
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+G+ L+ M A ++ A+ VF+ + + VV W+ +I+ +V + +A+++F
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDG 249
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ T+ S++SACT L +VR G +HS A+ G D + LV+MY+K ++E+A
Sbjct: 250 FEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIEQAM 308
Query: 258 ----KVFNLMREKNLQSWTIMISGLADNG-RGNYAISLFAKMIQTGLKPDSISFSAILSA 312
KVF MR+ ++ SWT +ISG +G + N + LF +M+ +KP+ I++S+IL A
Sbjct: 309 DYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKA 368
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
C+++ D G+ A V H +V M +G +EEA + N
Sbjct: 369 CANISDHDSGRQVH---AHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVF-------N 418
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+ RS + +C G+ LD +G++ + + A+ + AA+
Sbjct: 419 QLYERSMI-SCITEGRDAPLDHRIGRMDMGISSSTFASLISAAA 461
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 225/395 (56%), Gaps = 4/395 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + +F+ + V L ++N++I AY + + ++ F EML G+RPD T +
Sbjct: 299 LQDAQRVFDGMEVRD-LVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357
Query: 110 ACGRCLLIGIGGSVHSLIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
G+ IG +VH + + L+ D IGN L+ MYA ID A+AVFE++P RDV+
Sbjct: 358 IFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVI 417
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSY 227
SW+++I G+ S+A+ ++ M+ PN T VS++ A + + ++ G IH
Sbjct: 418 SWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGR 477
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+ N L LDV + T L++MY KCG +E A +F + ++ W +IS L +G G A
Sbjct: 478 LIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKA 537
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ LF M G+K D I+F ++LSACSH GLVDE + FD M + Y IKP ++HYGCMVD
Sbjct: 538 LQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVD 597
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
+ GRAG +E+AY+++ NMP + +A I + L ACR HG L LL+++ E
Sbjct: 598 LFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNA-ELGTFASDRLLEVDSENVG 656
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
YVL +++ + G W+ A ++ +GL K PG
Sbjct: 657 YYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L L + ++++ + ++ L + + F ++ +F++N+++ AY +
Sbjct: 69 QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ-RKNIFSWNSMVSAYVRR 127
Query: 80 SCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+S+ E+L +G+RPD +T+P V+KAC L + G +H + K+G + D Y+
Sbjct: 128 GRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHDVYV 184
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+L+ +Y+ ++VA VF +MPVRDV SW++MI+GF + ++AL+V RMK
Sbjct: 185 AASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEV 244
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
++VT+ S++ C +V G +H Y + +GLE DV + AL+ MYSK G ++ A +
Sbjct: 245 KMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQR 304
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M ++L SW +I+ N A+ F +M+ G++PD ++ ++ S L
Sbjct: 305 VFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSD 364
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
G+ + R ++ + +V+M + G I+ A + +P+
Sbjct: 365 RRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR 414
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
C I + +H+L+ +G D + L+ +YA ++ ++ F+ + +++ SW+SM
Sbjct: 61 CTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSM 120
Query: 174 IAGFVACDSPSDALK-VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
++ +V D++ V + L+ P+ T ++ AC SL + GE +H + + G
Sbjct: 121 VSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMG 177
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
E DV + +L+ +YS+ G VE A KVF M +++ SW MISG NG A+ +
Sbjct: 178 FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLD 237
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDM 348
+M +K D+++ S++L C+ V G + +Y IK +E +++M
Sbjct: 238 RMKTEEVKMDTVTVSSMLPICAQSNDVVGGV-----LVHLYVIKHGLESDVFVSNALINM 292
Query: 349 LGRAGLIEEAYHIIRNM 365
+ G +++A + M
Sbjct: 293 YSKFGRLQDAQRVFDGM 309
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
S N+ + +H+ +V G DV L T LV +Y+ G + + F ++ KN+ SW
Sbjct: 60 SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119
Query: 274 MISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
M+S GR ++ +++ +G++PD +F +L AC L L D E
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC--LSLAD------GEKMHC 171
Query: 333 YNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
+ +K EH ++ + R G +E A+ + +MP G C+N
Sbjct: 172 WVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 244/431 (56%), Gaps = 7/431 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF--TRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH+ ++T+ D N + + I LS+ H+ S+F+ + + ++ T+I
Sbjct: 257 QLHSYVVRTAYDGNISVYNSLIQMYLSVG-HWKEAESVFSGMECRD-VVSWTTIISGCVD 314
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ + M TG PD T V+ AC + +G +H L + G +
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVV 374
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N+L+ MY+ CK I+ A +F ++P +DV+SW+S+I G + +AL F +M L ++
Sbjct: 375 ANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK 434
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PNSVTL+S +SAC + + G+ IH++A+ G+ D L A++++Y +CG + A
Sbjct: 435 -PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALN 493
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
FNL EK++ +W I+++G A G+G + LF +M+++ + PD ++F ++L ACS G+
Sbjct: 494 QFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGM 552
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V EG YF M Y+I P ++HY C+VD+LGRAG + EA+ I MP +P+ I + L
Sbjct: 553 VTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR H VL L + + + K + E Y+L ++ + SG WD A++ + ++GL
Sbjct: 613 NACRIHRHVL-LGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLI 671
Query: 439 KVPGCSWVKVN 449
PGCSWV+V
Sbjct: 672 VDPGCSWVEVK 682
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 187/338 (55%), Gaps = 2/338 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF++N L+ Y K E++ L+ +L G+RPD +T+P V+++C + + G VH+
Sbjct: 100 LFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHA 159
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ + D D + N L+ MY C ++ A+ +F++MP RD +SW++MI+G+ D +
Sbjct: 160 HVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLE 219
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L++F RM+ + P+ +T+ S++SAC L + R G +HSY V + ++++ +L++
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQ 279
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY GH ++A VF+ M +++ SWT +ISG DN + A+ + M TG PD ++
Sbjct: 280 MYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVT 339
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+++LSAC+ LG +D G + R +I + ++DM + IE+A I +
Sbjct: 340 IASVLSACASLGQLDMGMKLHELAERTGHILYVVVA-NSLIDMYSKCKRIEKALEIFHQI 398
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
P + + + S + R + + K++LK +P
Sbjct: 399 P-DKDVISWTSVINGLRINNRCFEALIFFRKMILKSKP 435
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+GN LL M+ ++ A VF M RD+ SW+ ++ G+ +AL ++HR+ A
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ T S++ +C +++ G +H++ V ++DV + AL+ MY KCG V A
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F+ M ++ SW MISG +N + LF +M + + PD ++ ++++SAC LG
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 318 LVDEG--------KNYFDEMARVYN----IKPTMEHY----------------------- 342
G + +D VYN + ++ H+
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
GC+ ++L L E Y + T P+ V + S L AC + GQ+
Sbjct: 311 GCVDNLLPDKAL--ETYKTMEITGTMPDEVTIASVLSACASLGQL 353
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE--LDVALGTAL 243
ALK M+ V+L+ C + GE + AV++ L L V LG AL
Sbjct: 17 ALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWK-AVLSSLVTLLSVRLGNAL 75
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ M+ + G V A+ VF M E++L SW +++ G G + A+ L+ +++ G++PD
Sbjct: 76 LSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDV 135
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+F ++L +C+ + G+ + R ++ ++ ++ M + G + A +
Sbjct: 136 YTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVSARMLFD 194
Query: 364 NMPTE 368
MPT
Sbjct: 195 KMPTR 199
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 236/432 (54%), Gaps = 35/432 (8%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG------------- 96
+ + R LF+ +P P + +N++ R YA++ E +F EM +
Sbjct: 1 MTYARQLFDQIP-DPNIALWNSMFRGYAQSESYRE---IFCEMFERNVVAWTSMINGYIL 56
Query: 97 ------------LRPDNFTYPFVVKACGRCLLIGIGGSVHSL-IFKVGLDSDKYIGNTLL 143
L P+ + + G I G V + +F + D NT+L
Sbjct: 57 SADLVSARRLFDLAPERDVVLWNIMVSG---YIEGGDMVEARKLFHEMPNRDVMFWNTVL 113
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNS 202
+ YA ++ + +FEEMP R++ SW+++I G+ + L F RM ++ PN
Sbjct: 114 KGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPND 173
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
TLV+++SAC L + G+ +H YA +GL+ +V +G AL++MY+KCG +E A VF
Sbjct: 174 ATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRG 233
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M K+L SW +I GLA + RG A++LF +M G KPD I+F IL AC+H+GLV++G
Sbjct: 234 MDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 293
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF MA Y I P +EHYGCMVDML RAG +E+A +R MP E + VI LGACR
Sbjct: 294 FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACR 353
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+ V + L + L++LEP+ ANYV+ +++ +G W+ A L VA+ G K+PG
Sbjct: 354 IYKNVELAELALQR-LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 412
Query: 443 CSWVKVNDGSAE 454
CS ++VND E
Sbjct: 413 CSLIEVNDAVVE 424
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 57/321 (17%)
Query: 1 MISRHIE--TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFN 58
M+S +IE +++ K H + +F T L + + ++ LF
Sbjct: 81 MVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKG----------YATNGNVEALEGLFE 130
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLI 117
+P +F++N LI YA E + F ML ++ + P++ T V+ AC R +
Sbjct: 131 EMP-ERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGAL 189
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
+G VH GL + Y+GN L+ MYA C I+ A +VF M +D++SW+++I G
Sbjct: 190 DLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGL 249
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
+DAL +F +MK A + P+ +T + ++ ACT +
Sbjct: 250 AMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM---------------------- 287
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNL-----QSWTIMISGLADNGRGNYAISLFA 292
G VE F F M + L + + M+ LA GR A++
Sbjct: 288 -------------GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVR 334
Query: 293 KMIQTGLKPDSISFSAILSAC 313
KM ++ D + ++ +L AC
Sbjct: 335 KM---PVEADGVIWAGLLGAC 352
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 248/442 (56%), Gaps = 9/442 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
IQL+K VH + + L L NT ++S L S SL R LF+ +P + +
Sbjct: 127 IQLAKIVHCIAIVSKL--SGDLLVNTAVLS---LYSKLRSLVDARKLFDKMPEKDRV-VW 180
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N +I AYA+ E ++LF M ++G+R D FT V+ + + + G H+ I +
Sbjct: 181 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G DS + N+L+ MY CK +D A +F M + V+SWS+MI G+V AL +
Sbjct: 241 NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL 300
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +MK + V +++++ A + + + +H Y++ GL +L TAL+ Y+K
Sbjct: 301 FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAK 360
Query: 250 CGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
CG +E A ++F + +K+L W MIS A++G + L+ +M + KPD ++F
Sbjct: 361 CGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFL 420
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L+AC + GLV++GK +F EM Y +P+ EHY CMV++LGRAGLI EA +++NMP
Sbjct: 421 GLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPI 480
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+A + L AC+ H L + + L+ +EP NY+L +++ + +G WD A+
Sbjct: 481 KPDARVWGPLLSACKMHPGS-KLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAK 539
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + KGL K+PGCSW+++N
Sbjct: 540 MRSFLRNKGLKKIPGCSWLEIN 561
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M+ + PD TYPFV+++C +G G ++H + K+G D + L MY C E
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+ A +F++ V+D+ SS+ D+ +VF RM P+S T +L+
Sbjct: 61 FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
L +++ + +H A+V+ L D+ + TA++ +YSK + A K+F+ M EK+ W
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 180
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
IMI+ A G+ + LF M ++G++ D + ++S+ + L VD GK + R
Sbjct: 181 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
+ H ++DM +++ A I N T+ + + + + +GQ L
Sbjct: 241 NGSDSQVSVH-NSLIDMYCECKILDSACKIF-NWMTDKSVISWSAMIKGYVKNGQSL 295
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++F M+ L PD+FT+ +++ I + VH + L D + +L +
Sbjct: 96 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 155
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y+ + + A+ +F++MP +D V W+ MIA + P++ L++F M + + T
Sbjct: 156 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 215
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
+ ++S+ L V G+ H++ + NG + V++ +L++MY +C ++ A K+FN M +
Sbjct: 216 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 275
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
K++ SW+ MI G NG+ A+SLF+KM G++ D + IL A H+G ++ K Y
Sbjct: 276 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVK-Y 334
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL-RSFLGACRNH 384
+ + ++ + G IE A + + +I+ S + A NH
Sbjct: 335 LHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANH 394
Query: 385 G 385
G
Sbjct: 395 G 395
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 251/448 (56%), Gaps = 4/448 (0%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPL-FAYNT 71
K + L +H+ +K +D + + + +I ++F+ + ++N+
Sbjct: 169 KDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNS 228
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I YA +++ F +ML G R D T ++ +C + ++ G +H+ +VG
Sbjct: 229 MIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVG 288
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
DSD + NTL+ MY+ C +I A+ +F+ M + VSW++MIAG+ +A+ +F
Sbjct: 289 CDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFS 348
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M+ E P+ VT++SL+S C + G+ I +YA NGL+ ++ + AL+++Y+KCG
Sbjct: 349 AMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCG 408
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++ A ++F M EK+L SWT +I+G A NG A+ LF +M++ GLKP+ I+F A+L
Sbjct: 409 SMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQ 468
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC+H G +++G F+ M +VY I P ++HY CM D+LGR G ++EA+ I+NMP +P+
Sbjct: 469 ACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDV 528
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
I L AC+ H V+ + + + L +LEP+ YV A++ + +G WD A +
Sbjct: 529 GIWSVLLSACKIHQNVV-IGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTM 587
Query: 432 INQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+ K PG S V+VN G E + E
Sbjct: 588 MKCNKAMKSPGKSLVQVN-GKTHEFTVE 614
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
FN + +N+ I + +++ LF +M + GL P+N T+P V KAC + L
Sbjct: 10 FNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLN 69
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ VH+ + K +D ++ +++ MY C ++ A +F MP RDV SW+SMI G
Sbjct: 70 LKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILG 129
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
F + +F M + +SVT++ L + SL +++ ESIHS+ + G++ D
Sbjct: 130 FAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD 189
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ---SWTIMISGLADNGRGNYAISLFAK 293
V++ + Y+KCG A VF+ + +K L+ SW MI+G A + + A+ F K
Sbjct: 190 VSVSNTWIAAYAKCGEFGLAETVFDGI-DKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKK 248
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M+ G + D + ++LS+C ++ GK +V ++ ++ M + G
Sbjct: 249 MLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQV-GCDSDIQVINTLISMYSKCG 307
Query: 354 LIEEAYHIIRNM 365
I A ++ NM
Sbjct: 308 DIGSARYLFDNM 319
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 250/435 (57%), Gaps = 13/435 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+ +++ L + + + + + S ++ +R +FN + + + ++ LI Y ++
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISGYVQS 327
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+IKLF ML + P+ FT+ V+KAC GIG +H K+GL + +G
Sbjct: 328 RQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVG 387
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL----KVFHRMKL 195
N+L+ MYA ++ A+ F + ++++S+++ A D+ + AL H ++
Sbjct: 388 NSLINMYARSGTMECARKAFNILFEKNLISYNT------AADANAKALDSDESFNHEVEH 441
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ T L+S + + GE IH+ V +G ++ + AL+ MYSKCG+ E
Sbjct: 442 TGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEA 501
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A +VFN M +N+ +WT +ISG A +G A+ LF +M++ G+KP+ +++ A+LSACSH
Sbjct: 502 ALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSH 561
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GL+DE +F+ M ++I P MEHY CMVD+LGR+GL+ EA I +MP + +A++ R
Sbjct: 562 VGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWR 621
Query: 376 SFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
+FLG+CR H L ++ K +L+ EP A Y+L +++ + G WD A L ++ QK
Sbjct: 622 TFLGSCRVHRNT-KLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQK 680
Query: 436 GLNKVPGCSWVKVND 450
L K G SW++V++
Sbjct: 681 KLIKETGYSWIEVDN 695
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 14/302 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTG---LRPDNFTYPFVVKACGRCLLIGIGGS 122
L +++ +I +A S ++ F ML+ + P+ + + ++++C L G +
Sbjct: 107 LVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLA 166
Query: 123 VHSLIFKVG-LDSDKYIGNTLLRMYAACK-EIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+ + + K G DS +G L+ M+ +I A+ VF++M +++V+W+ MI +
Sbjct: 167 IFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQL 226
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
DA+ +F R+ ++ +P+ TL SL+SAC L G+ +HS+ + +GL DV +G
Sbjct: 227 GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVG 286
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
LV+MY+K VE + K+FN M N+ SWT +ISG + + AI LF M+ +
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVT 346
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLIE 356
P+ +FS++L AC+ L GK + IK + C +++M R+G +E
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQ-----TIKLGLSTINCVGNSLINMYARSGTME 401
Query: 357 EA 358
A
Sbjct: 402 CA 403
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 171/369 (46%), Gaps = 18/369 (4%)
Query: 25 LFLKTS-LDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
LKT D + C+ I T + + R +F+ + L + +I Y++
Sbjct: 170 FLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQ-HKNLVTWTLMITRYSQLGL 228
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
+++ LF +L + PD FT ++ AC +G +HS + + GL SD ++G T
Sbjct: 229 LDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCT 288
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
L+ MYA ++ ++ +F M +V+SW+++I+G+V +A+K+F M + +PN
Sbjct: 289 LVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPN 348
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
T S++ AC SL + G+ +H + GL +G +L+ MY++ G +E A K FN
Sbjct: 349 CFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFN 408
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFSAILSACSHLGLVD 320
++ EKNL S+ N + + F ++ TG+ +++ +LS + +G +
Sbjct: 409 ILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIV 465
Query: 321 EGKNYFDEMARVYNIKPTMEHYGC----MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+G E +K C ++ M + G E A + +M N + S
Sbjct: 466 KG-----EQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVITWTS 519
Query: 377 FLGACRNHG 385
+ HG
Sbjct: 520 IISGFAKHG 528
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 137/268 (51%), Gaps = 10/268 (3%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-- 163
++KAC R + +G +H + GL D + N+L+ +Y+ C + + A ++F M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRA 220
RD+VSWS++I+ F S AL F M + + PN +L+ +C++ +
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 221 GESIHSYAVVNG-LELDVALGTALVEMYSKCG-HVEKAFKVFNLMREKNLQSWTIMISGL 278
G +I ++ + G + V +G AL++M++K G ++ A VF+ M+ KNL +WT+MI+
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+ G + A+ LF +++ + PD + +++LSAC L GK + R
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 339 MEHYGC-MVDMLGRAGLIEEAYHIIRNM 365
GC +VDM ++ +E + I M
Sbjct: 284 F--VGCTLVDMYAKSAAVENSRKIFNTM 309
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K R+ L SP + L+ AC N+ G+ +H + +GL LD L +L+ +Y
Sbjct: 26 KAISRLDLTTTSP-LIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLY 84
Query: 248 SKCGHVEKAFKVFNLM--REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG---LKPD 302
SKCG E A +F M +++L SW+ +IS A+N + A+ F M+Q + P+
Sbjct: 85 SKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPN 144
Query: 303 SISFSAILSACSHLGLVDEG---------KNYFDEMARVYNIKPTMEHYGC-MVDMLGRA 352
F+A+L +CS+ G YFD V GC ++DM +
Sbjct: 145 EYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCV----------GCALIDMFTKG 194
Query: 353 GL-IEEAYHIIRNM 365
GL I+ A + M
Sbjct: 195 GLDIQSARMVFDKM 208
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 254/486 (52%), Gaps = 46/486 (9%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLD--HNTCIISRFILTSLS----------ISLHFTRSL 56
+I+ K++ LHQ+H + T L H I++ + T S I + SL
Sbjct: 6 VIKQCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSL 65
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+++P P F++NTLIR + + ++ LF + + L PD T+PFV+KA +
Sbjct: 66 FHSIP-NPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQLHS 124
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA----------------------------- 147
+ + S+HS K GL D + NTL+ +Y+
Sbjct: 125 LSLAQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHG 184
Query: 148 --ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
++I A+ +F+EMPVRD +SW +MIAG+ + A+++F+ M P+++ L
Sbjct: 185 LVKTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIAL 244
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
VS++SAC L + G +H Y N + +D L T LV++Y+KCG VE A VF E
Sbjct: 245 VSVLSACAQLGELEQGSIVHDYIKRNRIRVDSYLATGLVDLYAKCGCVETARDVFESCME 304
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
K + +W M+ G A +G G+ + F++M+ G+KPD ++ +L CSH GLV E +
Sbjct: 305 KYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRI 364
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
FDEM VY +K +HYGCM DML RAGLIEE +++ MP+ + LG CR HG
Sbjct: 365 FDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGLLGGCRIHG 424
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN-QKGLNKVPGCS 444
V + + +++++PE G Y + A++ + + WD ++ +++ K K+ G S
Sbjct: 425 NV-EVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRAKKITGRS 483
Query: 445 WVKVND 450
+++ND
Sbjct: 484 LIRLND 489
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 221/379 (58%), Gaps = 1/379 (0%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I Y + ++++F +L+ +R ++ T V+ AC + +G +H I K G
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
Y+G+ ++ MYA C +D+A F + +D V W+SMI P +A+ +F
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
+M +A + V++ + +SAC +L + G+ IH++ + D+ +AL++MYSKCG
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 600
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+++ A +VF+ M EKN SW +I+ ++GR +++LF M+ G++PD ++F AI+S
Sbjct: 601 NLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC H G VDEG +YF M I MEHY CMVD+ GRAG + EA+ +I +MP P+A
Sbjct: 661 ACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA 720
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+ + LGACR HG V L + + L L+P+ YVL ++V + +G W++ ++
Sbjct: 721 GVWGTLLGACRLHGNV-ELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSL 779
Query: 432 INQKGLNKVPGCSWVKVND 450
+ ++G+ KVPGCSW+ VN+
Sbjct: 780 MKERGVQKVPGCSWIDVNN 798
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 197/402 (49%), Gaps = 37/402 (9%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +IR + ++ + +ML G PD +T+P+V+KACG + +G VH I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+G + D ++G++L++ Y+ I A+ +F+ MP +D V W+ M+ G+V +A
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
VF M+ +PNSVT ++S C S I + G +H V +GLE+D + L+ MY+
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCGH+ A ++F++M + +L +W MISG NG + A LF +MI +KPDSI+FS+
Sbjct: 295 KCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSS 354
Query: 309 ILSACSHLGLVDEGKN-----------------------YFD----EMAR-VYNIKPTME 340
L S + +GK YF EMAR +++ + ++
Sbjct: 355 FLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVD 414
Query: 341 HYGCMVDMLGRA--GLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQVLYLDDNLG 395
C + G G+ A I R + E N+V L S L AC L L L
Sbjct: 415 IVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLA-ALTLGKELH 473
Query: 396 KLLLKLEPELGANYVLAA--SVSSLSGNWDTAAELMVAINQK 435
+LK G+ YV +A + + G D A + + I+ K
Sbjct: 474 GHILK-NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK 514
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 189/368 (51%), Gaps = 4/368 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF-TRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L + + L+ ++ + + + F R LF+ +P T L +N +I Y +
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTD-LVTWNGMISGYVQN 327
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+ LF EM+ ++PD+ T+ + + G +H I + G+ D ++
Sbjct: 328 GFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLK 387
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ +Y C+++++A+ +F++ D+V ++MI+G+V ++AL++F +
Sbjct: 388 SALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 447
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
NSVTL S++ AC L + G+ +H + + NG +G+A+++MY+KCG ++ A +
Sbjct: 448 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 507
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + +K+ W MI+ + NG+ AI LF +M G K D +S SA LSAC++L +
Sbjct: 508 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 567
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK M R + + ++DM + G ++ A + M E N V S +
Sbjct: 568 HYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTM-EEKNEVSWNSIIA 625
Query: 380 ACRNHGQV 387
A NHG++
Sbjct: 626 AYGNHGRL 633
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G H+ + G+ + +G LL MY C AK +F ++ + W+ MI GF
Sbjct: 65 GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
AL + +M P+ T ++ AC L +V G +H G ELDV +
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G++L++ YS+ G + A +F+ M K+ W +M++G NG + A +F +M +T
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244
Query: 300 KPDSISFSAILSACSHLGLVDEG 322
P+S++F+ +LS C+ +++ G
Sbjct: 245 NPNSVTFACVLSVCASEIMINFG 267
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 180 CDSPSDA--LKVFH----------RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
C PS LK FH + + N+ + LVS++ CT + G H+
Sbjct: 12 CFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQ 71
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
+VNG+ + LGT L+ MY CG A +F +R + W MI G G+ ++A
Sbjct: 72 MLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFA 131
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD 347
+ + KM+ G PD +F ++ AC L V G+ D++ + + + ++
Sbjct: 132 LLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKI-QFMGFELDVFVGSSLIK 190
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA 407
G I +A ++ MP++ + V+ L +G D+ G + E
Sbjct: 191 FYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNGD---WDNATGVFMEMRRTETNP 246
Query: 408 NYVLAASVSSLSGNWDTAAELMV 430
N V A V S+ A+E+M+
Sbjct: 247 NSVTFACVLSV-----CASEIMI 264
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 226/395 (57%), Gaps = 2/395 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P + ++N +I + ++I +F EM + G FT VV AC
Sbjct: 55 VFDEIP-ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKG 113
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +H+ K +D+D ++G L+ +YA C I+ A VFE MP R+ V+WSS++A
Sbjct: 114 DVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVA 173
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
GFV + + L +F R K N + S++ AC L + G +H+ G
Sbjct: 174 GFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGP 233
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ + +ALV+MY+KCG +E+A+ +F + +KN+ W +ISG A + + ++LF +M
Sbjct: 234 NNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQ 293
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
QTG++PD +++ A+LSAC H+GLVD+G++YFD M R +N+ P + HY CMVD+LGR GL+
Sbjct: 294 QTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLV 353
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
EA+ ++ MP A + S L +CR HG L L + K L ++EP+ G NYVL A+
Sbjct: 354 HEAHELMTKMPFAATASMWGSLLASCRIHGN-LELAEIAAKNLFEMEPDRGGNYVLLANT 412
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ S W+ AA+ ++ + K G SW+++ D
Sbjct: 413 YAASKKWEEAAKARKSLKGSEILKERGKSWIEIKD 447
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 2/266 (0%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G + H + ++GL++D N L+ MY+ C I A VF+E+P R +VSW+ MI V
Sbjct: 17 GKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQ 76
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
A+ +F M+ + T+ S+V AC + +V +H++A+ ++ DV +
Sbjct: 77 NGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFV 136
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
GTAL+++Y+KCG +E A VF M E+N +W+ +++G N + LFA+ + GL
Sbjct: 137 GTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGL 196
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+ + S+++ AC+ L + EG+ + R P +VDM + G IEEAY
Sbjct: 197 ENNQFMISSVIRACAGLAALIEGRQVHAIVCRT-GFGPNNFVASALVDMYAKCGSIEEAY 255
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHG 385
+ N+ + N V+ + + H
Sbjct: 256 VLFCNIE-KKNVVLWNAIISGFAKHA 280
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L SL+ C G++ H + GLE D L+ MYSKCG + +A KVF+ +
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
E+++ SW IMI NG AI +F +M + G + S+++ AC+ G V
Sbjct: 61 ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDV----- 115
Query: 325 YFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+F + IK ++ ++D+ + G IE+A + MP E N V S +
Sbjct: 116 FFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMP-ERNDVTWSSIVAG 174
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 239/413 (57%), Gaps = 2/413 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R LF+ + + + ++N++I AY + E++ +F +ML G++P + + +
Sbjct: 286 SLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +H L ++GLD + + N+L+ MY CKE+D A ++F ++ R +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI GF P DAL F +M+ P++ T VS+++A L + IH
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + L+ +V + TALV+MY+KCG + A +F++M E+++ +W MI G +G G A+
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M + +KP+ ++F +++SACSH GLV+ G F M Y+I+ +M+HYG MVD+
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + EA+ I MP +P + + LGAC+ H V + + + L +L P+ G
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA-EKAAERLFELNPDDGGY 643
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+VL A++ + W+ ++ V++ ++GL K PGCS V++ + S TA
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 149/255 (58%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y+T+++ +AK S ++++ F M + P + + +++K CG + +G +H L+
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D + L MYA C++++ A+ VF+ MP RD+VSW++++AG+ AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ M N P+ +T+VS++ A ++L + G+ IH YA+ +G + V + TALV+MY+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M E+N+ SW MI N A+ +F KM+ G+KP +S
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 309 ILSACSHLGLVDEGK 323
L AC+ LG ++ G+
Sbjct: 343 ALHACADLGDLERGR 357
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 184/369 (49%), Gaps = 17/369 (4%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P L ++NT++ Y++ + ++++ M + L+P T V+ A
Sbjct: 190 RKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
LI +G +H + G DS I L+ MYA C ++ A+ +F+ M R+VVSW+SM
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I +V ++P +A+ +F +M P V+++ + AC L ++ G IH +V GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V++ +L+ MY KC V+ A +F ++ + L SW MI G A NGR A++ F++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGCMVDMLG 350
M +KPD+ ++ ++++A + L + K + R N+ T +VDM
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT----ALVDMYA 484
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
+ G I A +I +M +E + + + HG GK L+L E+ +
Sbjct: 485 KCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG--------FGKAALELFEEMQKGTI 535
Query: 411 LAASVSSLS 419
V+ LS
Sbjct: 536 KPNGVTFLS 544
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L+FK GL + + L+ ++ +D A VFE + + V + +M+ GF
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+ F RM+ + P L+ C +R G+ IH V +G LD+ T L
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KC V +A KVF+ M E++L SW +++G + NG A+ + M + LKP I+
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 306 FSAILSACSHLGLVDEGKNY--------FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
++L A S L L+ GK FD + + +VDM + G +E
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST---------ALVDMYAKCGSLET 289
Query: 358 AYHIIRNMPTEPNAVILRSFLGA 380
A + M E N V S + A
Sbjct: 290 ARQLFDGM-LERNVVSWNSMIDA 311
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
I + +LS T HH +H + +++ LD N + + + + + ++ R +F+ +
Sbjct: 445 ITAIAELSIT-HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ER 502
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ +N +I Y +++LF+EM K ++P+ T+ V+ AC L+ G
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 125 SLI---FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
++ + + L D Y ++ + ++ A +MPV+ V+
Sbjct: 563 YMMKENYSIELSMDHY--GAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 227/396 (57%), Gaps = 3/396 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
T +F N+ + ++ +I +Y + + LF EM G+RPD F + A
Sbjct: 139 TNKIFRNME-QKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFA 197
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G SVH + G++ + N L+ MY C ++ A+ +F+ + +D +SW++
Sbjct: 198 GNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNT 257
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G+ + ++A +F+ M L PN+VT+ ++ A SL ++ G +H+YAV G
Sbjct: 258 LIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRG 316
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
D + ALV+MY KCG + A ++F+++ KNL SWTIMI+G +GRG AI+LF
Sbjct: 317 YLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFE 376
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M +G++PD+ SFSAIL ACSH GL DEG +F+ M + I+P ++HY CMVD+L
Sbjct: 377 QMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHT 436
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
G ++EAY I MP EP++ I S L CR H V L + + +++ +LEPE YVL
Sbjct: 437 GNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNV-KLAEKVAEMVFELEPENTGYYVLL 495
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
A++ + + W+ +L + +GL + GCSW++V
Sbjct: 496 ANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEV 531
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 143/268 (53%), Gaps = 2/268 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P + ++N++I A ++++LF M G D+ T V+ AC +
Sbjct: 41 VFDEMP-QRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSH 99
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
IGG VH + GL S+ +GN LL MY+ C + +F M ++VVSW++MI
Sbjct: 100 YSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMIT 159
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ +F M L P+ + S + A +++ G+S+H YA+ NG+E
Sbjct: 160 SYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEE 219
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ + AL+EMY KCG++E+A +F+ + +K+ SW +I G + + N A +LF +M+
Sbjct: 220 VLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML 279
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGK 323
L+P++++ + IL A + L ++ G+
Sbjct: 280 LQ-LRPNAVTMACILPAAASLSSLERGR 306
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH + K G + + N L+ YA I+ A VF+EMP RD++SW+S+I G +
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
A+++F RM L + +S TL+S++ AC G +H Y+V GL + +LG A
Sbjct: 66 YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MYS C K+F M +KN+ SWT MI+ G + LF +M G++PD
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ ++ L A + + GK+ R I+ + +++M + G +EEA I
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIR-NGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE---LGANYVLAASVSSL 418
++ T+ + + + +G ++LL+L P + AAS+SSL
Sbjct: 245 DHV-TKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSL 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H Y V G A+ AL+ Y+K +E A VF+ M ++++ SW +I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSAC--SHLGLV 319
NG + A+ LF +M G + DS + +++ AC SH +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFI 103
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 253/470 (53%), Gaps = 46/470 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLFNNLPVTPPLFAYNTLIRAY 76
Q+H + +L + I SR IL ++S + +LF ++P P +F YN++I +Y
Sbjct: 6 QIHAHAITNNLTRFSYISSR-ILAFFALSPRGDFRYAETLFTHIP-NPNIFDYNSIITSY 63
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
S + +F +ML T +RP++ T+ +VKAC + + V +L K+G SD
Sbjct: 64 TTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKAC---VSLSSLEQVFTLSMKLGNSSDV 120
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
Y ++++ ++ I +A+ VF+E R+VV W+S+++G+ +C ++A VF +M L
Sbjct: 121 YFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLR 180
Query: 197 NESP------------------------------------NSVTLVSLVSACTSLINVRA 220
NE+ N LVS+++ACT +
Sbjct: 181 NEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEE 240
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ IHSY NGLE D+ LGTAL++ Y KCG V+ A KVFN M K++ +W+ MI GLA
Sbjct: 241 GKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAI 300
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
NG A+ LF KM + G KP+ ++F +L+AC+H L E F M+ YNI P++E
Sbjct: 301 NGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIE 360
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HYGC+VD+L R+G +++A I +M EP+ I S L C HG L +GK L++
Sbjct: 361 HYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGH-YELGQKVGKYLIE 419
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
EP+ YVL A++ + G W+ +E+ + +G+ V G S+++++
Sbjct: 420 FEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQ 469
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 233/410 (56%), Gaps = 33/410 (8%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + + +F+ + L ++N+LI Y++ + E + LF+ M + + D+ T V+
Sbjct: 208 LGYAQKVFDKMD-DRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVIL 266
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE--------- 160
AC G+ S+ I +D D Y+GN+L+ MY +D+A+ VF+
Sbjct: 267 ACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVS 326
Query: 161 ----------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
EMP+R+V+SW+ MI+G + SDALK+F M AN
Sbjct: 327 WNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANV 386
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ +T+ S++SAC+ L + G+++H Y + ++ DV +G AL++MY KCG V+KA +
Sbjct: 387 KPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALE 446
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M++K+ SWT MI GLA NG + LF++M++ GL+P SF IL AC+H GL
Sbjct: 447 VFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGL 506
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VD+G YF+ M VY ++P M+HYGC+VD+L R+G ++ AY I+ MP P+ V+ R L
Sbjct: 507 VDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILL 566
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
AC+ H ++ + K LL+L+P NYVL ++ + S WD A+ +
Sbjct: 567 SACKLHRNLVLAEIATSK-LLELDPSNSGNYVLLSNTYAGSDRWDDASRM 615
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 214/414 (51%), Gaps = 34/414 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPV 62
+R + +I+ ++ + + H ++T N +S I + H ++ F + +
Sbjct: 57 TRKCQQIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQI 116
Query: 63 -TPPLFAYNTLIRAYAKTSCSIESIKLF-DEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P L +N LIR +++ E+I ++ D M G+ DN T+ ++ KAC R + G
Sbjct: 117 GQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHG 176
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
H + K+G S +I N+L+RMY E+ A+ VF++M RD+VSW+S+I G+ C
Sbjct: 177 QVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQC 236
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ + L +F+ M+ AN + +SVT+V ++ AC+ L +S+ Y +++DV LG
Sbjct: 237 NRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLG 296
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQ------------------------------- 269
+L++MY + G V+ A +VF+ M+EKN+
Sbjct: 297 NSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVI 356
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SWT MISG A + + A+ LF +M+ +KPD I+ S++LSACSHLGL+D G+ + M
Sbjct: 357 SWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYM 416
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
R ++IK + ++DM + G++++A + +M + + LG N
Sbjct: 417 CR-HDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVN 469
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 244/438 (55%), Gaps = 14/438 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K ++ N + S I L S + +R + ++ + + N LI +
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS-MVPINALITGLVQN 608
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL-DSDKYI 138
+ E+I+LF ++LK G +P NFT+ ++ C + IG VHS K L + D +
Sbjct: 609 NREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSL 668
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
G +L+ +Y CK ++ A + E+P +++V W++ I+G+ +L +F RM+ +
Sbjct: 669 GISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHD 728
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ T S++ AC+ + + G+ IH + +G +AL++MYSKCG V +F
Sbjct: 729 VRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSF 788
Query: 258 KVFNLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
++F ++ K N+ W MI G A NG N A+ LF KM ++ LKPD ++ +L ACSH
Sbjct: 789 EIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHA 848
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ EG+N FD M++VY I P ++HY C++D+LGR G ++EA +I +P + VI +
Sbjct: 849 GLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWAT 908
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
FL AC+ H D+ GK+ L+++EP+ + YV +S+ + +GNW A A+
Sbjct: 909 FLAACQMHK-----DEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAM 963
Query: 433 NQKGLNKVPGCSWVKVND 450
+KG+ K PGCSW+ V +
Sbjct: 964 REKGVMKFPGCSWITVGN 981
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 160/296 (54%), Gaps = 2/296 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H +K LD N + S I L + + +F+ + +N ++ + +
Sbjct: 347 QQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD-FSTEKNIVMWNAMLYGFVQ 405
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+I++F M + L D+FT+ V+ AC + IG VH + K +D+D ++
Sbjct: 406 NDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFV 465
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N +L MY+ IDVAKA+F +P +D VSW+++I G + +A+ + RMK
Sbjct: 466 ANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGI 525
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P+ V+ + ++AC+++ G+ IH ++ + + A+G++L+++YSK G VE + K
Sbjct: 526 APDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRK 585
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
V + ++ +I+GL N R + AI LF ++++ G KP + +F++ILS C+
Sbjct: 586 VLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT 641
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 164/309 (53%), Gaps = 2/309 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R+L + + P A+N +I +Y+++ E L+ +M + GL P T+ ++ A
Sbjct: 281 RTLLKRIQM-PSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAAS 339
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G +H+ K GLD++ ++G++L+ +Y I AK VF+ +++V W++M
Sbjct: 340 MTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAM 399
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+ GFV D + +++F M+ A+ + T VS++ AC +L ++ G +H + N +
Sbjct: 400 LYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSM 459
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D+ + A+++MYSK G ++ A +F+L+ K+ SW +I GLA N A+ + +
Sbjct: 460 DADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKR 519
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G+ PD +SF+ ++ACS++ + GK + YN+ ++D+ + G
Sbjct: 520 MKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIK-YNVCSNHAVGSSLIDLYSKFG 578
Query: 354 LIEEAYHII 362
+E + ++
Sbjct: 579 DVESSRKVL 587
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 45/317 (14%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + P + ++I Y + +++ LF M K G PD TY ++
Sbjct: 215 RRVFDGI-ACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTII----- 268
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
S + +G SD A+ + + + + V+W+++
Sbjct: 269 -----------STLASMGRLSD-------------------ARTLLKRIQMPSTVAWNAV 298
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+ + S+ ++ MK P T S++SA S+ G+ IH+ AV +GL
Sbjct: 299 ISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGL 358
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V +G++L+ +Y K G + A KVF+ EKN+ W M+ G N I +F
Sbjct: 359 DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQY 418
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDML 349
M + L+ D +F ++L AC +L +D G+ IK +M+ M+DM
Sbjct: 419 MRRADLEADDFTFVSVLGACINLDSLDIGRQ-----VHCITIKNSMDADLFVANAMLDMY 473
Query: 350 GRAGLIEEAYHIIRNMP 366
+ G I+ A + +P
Sbjct: 474 SKLGAIDVAKALFSLIP 490
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 30/320 (9%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
++ A+ + CSI G PD F V+ AC R + G VH + K G
Sbjct: 143 VLDAFQRLRCSI------------GGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSG 190
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
S + L+ MYA C E+ A+ VF+ + D + W+SMIAG+ AL +F
Sbjct: 191 FCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFS 250
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG-TALVEMYSKC 250
RM+ +P+ VT V+++S S+ G + ++ +++ + A++ YS+
Sbjct: 251 RMEKMGSAPDQVTYVTIISTLASM-----GRLSDARTLLKRIQMPSTVAWNAVISSYSQS 305
Query: 251 GHVEKAFKVFNLMREKNL----QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
G + F ++ M+ + L ++ M+S A + + A ++ GL +
Sbjct: 306 GLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVG 365
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA---YHIIR 363
S++++ G + + K FD ++ + + + M+ + L EE + +R
Sbjct: 366 SSLINLYVKHGCISDAKKVFD-----FSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMR 420
Query: 364 NMPTEPNAVILRSFLGACRN 383
E + S LGAC N
Sbjct: 421 RADLEADDFTFVSVLGACIN 440
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM 274
RA +H+ + GL L LG ALV++Y + G V A++ + + + +
Sbjct: 71 QARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSV 130
Query: 275 ISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+S A +G + F ++ G PD + +LSACS LG +++G+
Sbjct: 131 LSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQ 181
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 260/453 (57%), Gaps = 15/453 (3%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCI---ISRFILTSLSISLHFTRSLFNNLPV 62
I T++Q + L ++ + L ++ I I F S+S SL + + LF ++ +
Sbjct: 12 ILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHI-L 70
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLIGIGG 121
P A+N++IR +A++ +++I ++ ML + PD FT+ F +KAC R +
Sbjct: 71 NPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCE 130
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH I + G + D + L+R Y +++A+ VF+ MP RD+V+W++MI+ +
Sbjct: 131 EVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAG 190
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
+AL+V+ M+ N + TLV L+S+C+ + + G +H A GL +V +G
Sbjct: 191 YHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGN 250
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++MY+KCG ++ A +VFN M ++ +W MI G +G G+ AI F +M++ G++P
Sbjct: 251 ALIDMYAKCGSLDGALEVFNGM-PRDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRP 309
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+SI+F +L CSH GLV+EG +F +M+ +N+KP ++HYGC+VDM GRAG +E+A I
Sbjct: 310 NSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEI 369
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYVLAASVSS 417
I + P + + V+ R L + + H V+ +G++ ++ +LGA + VL A++ +
Sbjct: 370 IGDSPWQDDPVLWRILLSSSKIHKNVV-----IGEIAMRNLSQLGAVNAGDCVLLATIYA 424
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + A + I ++G+ PG SW++V+D
Sbjct: 425 GANDEQGVARMRKLIKKQGIKTTPGWSWIEVSD 457
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 231/385 (60%), Gaps = 6/385 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG--SVHSL 126
YNT+IRA + + + + L+ +M + G+ D + FVVK+C R + + G VH
Sbjct: 5 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFVVKSCIRLXGLYLLGGVQVHCN 64
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
IFK G D + ++ +Y+ C+ A VF+EMP RD V+W+ MI+ + + DA
Sbjct: 65 IFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPPRDTVAWNVMISCCIRNNRTRDA 124
Query: 187 LKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
L +F ++ ++ P+ VT + L+ AC L + GE IH Y + +G + L AL+
Sbjct: 125 LSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALI 184
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MYS+CG ++KA +VF KN+ SW+ MISGLA NG G AI F +M++ G++PD
Sbjct: 185 SMYSRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQ 244
Query: 305 SFSAILSACSHLGLVDEG-KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ + +LSACS+ G+VDEG ++FD M+R + + P + HYGCMVD+LG AGL+++A +I
Sbjct: 245 TLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIM 304
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+M +P++ R+ LGACR HG V + +G L++L+ + ++VL ++ S +G+W+
Sbjct: 305 SMVEKPDSTTWRTLLGACRIHGHVTLGERVIGH-LIELKAQEAGDHVLLLNIYSSAGHWE 363
Query: 424 TAAELMVAINQKGLNKVPGCSWVKV 448
AE+ + K + PGCS +++
Sbjct: 364 KVAEVRKLMKNKSIQTTPGCSTIEL 388
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 228/405 (56%), Gaps = 9/405 (2%)
Query: 49 SLHFTRSLFN----NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTY 104
SLH RS+F+ N V P +N +I Y+++ CS E+++L+ +M + G+ D +TY
Sbjct: 372 SLHDARSVFDTNFINCGVNTP---WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 428
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLD-SDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
V A + G VH ++ K GLD + N + Y+ C ++ + VF+ M
Sbjct: 429 CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 488
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RD+VSW++++ + +AL F M+ +PN T S++ +C SL + G
Sbjct: 489 ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ 548
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H GL+ + + +AL++MY+KCG + +A KVF+ + ++ SWT +ISG A +G
Sbjct: 549 VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGL 608
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF +M +G+K ++++ +L ACSH G+V+EG YF +M Y + P MEHY
Sbjct: 609 VEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYA 668
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
C++D+LGR G +++A IR MP EPN ++ ++ LG CR HG V L + + +L + P
Sbjct: 669 CIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV-ELGEIAARKILSIRP 727
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
E A YVL ++ +G+++ L + +G+ K PG SW+ V
Sbjct: 728 EYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 772
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 137/259 (52%), Gaps = 3/259 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P +F++ +I + + K F EML +G+ PD F Y ++++C
Sbjct: 177 VFDEMP-QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD 235
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G VH+ I G + ++ +LL MYA I+ + VF M + VSW++MI+
Sbjct: 236 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 295
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G + +A +F RMK +PN TLVS+ A L++V G+ + + A G+E
Sbjct: 296 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 355
Query: 236 DVALGTALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+V +GTAL++MYSKCG + A VF N + W MISG + +G A+ L+ +
Sbjct: 356 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 415
Query: 294 MIQTGLKPDSISFSAILSA 312
M Q G+ D ++ ++ +A
Sbjct: 416 MCQNGITSDLYTYCSVFNA 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKY--IGNTLLRMYAACKEIDVAKAVFEEMPV 164
V++ C I +VH L+ K + + N +Y+ C E A VF+EMP
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
R+V SW+ MI G D K F M + P+ +++ +C L ++ G+ +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H+ V+ G + + T+L+ MY+K G +E ++ VFN+M E N SW MISG NG
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A LF +M P+ + ++ A L V+ GK A I+ +
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE-VQNCASELGIEGNVLVGTA 362
Query: 345 MVDMLGRAGLIEEAYHIIRN------MPTEPNAVILRSFLGACRNHGQVLYLD 391
++DM + G + +A + + T NA+I C LY+
Sbjct: 363 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 415
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/442 (33%), Positives = 236/442 (53%), Gaps = 14/442 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
++ K V ++ ++ + NT I + S + R LF+ PV +F
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITG----YAQSGKIDEARQLFDESPVQD-VFT 283
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++ Y + E+ +LFD+M P+ + G + G + +F
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAG--YVQGERMEMAKELF 335
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
V + NT++ YA C +I AK +F++MP RD VSW++MIAG+ +AL+
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M+ N + S +S C ++ + G+ +H V G E +G AL+ MY
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E+A +F M K++ SW MI+G + +G G A+ F M + GLKPD + A
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH GLVD+G+ YF M + Y + P +HY CMVD+LGRAGL+E+A+++++NMP E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A I + LGA R HG L + + +EPE YVL +++ + SG W +L
Sbjct: 576 PDAAIWGTLLGASRVHGNT-ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
V + KG+ KVPG SW+++ +
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQN 656
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 47/346 (13%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
RS+F+ +P + ++N L+ AY + S E+ LF L N
Sbjct: 177 RSVFDRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWN------------ 223
Query: 114 CLLIGIGGSVHSLIFKVGLDS----DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
CLL G + + DS D NT++ YA +ID A+ +F+E PV+DV +
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA-----CTSLINVRAGESI 224
W++M++G++ +A ++F +M NE + L V L +V ++
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
++ ++ Y++CG + +A +F+ M +++ SW MI+G + +G
Sbjct: 344 STW-------------NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF +M + G + + SFS+ LS C+ + ++ GK + +K E GC
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL-----VKGGYET-GC 444
Query: 345 MVD-----MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
V M + G IEEA + + M + + V + + HG
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG 489
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 158/366 (43%), Gaps = 43/366 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +P + +YN +I Y + + KLFDEM + L ++ ++K R
Sbjct: 86 VFKRMPRWSSV-SYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNR 140
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+G +F++ + D NT+L YA +D A++VF+ MP ++ VSW+++++
Sbjct: 141 NLGKARE----LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 176 GFVACDSPSDALKVFH-RMKLANESPNS-----VTLVSLVSACTSL--INVRAGES---- 223
+V +A +F R A S N V +V A +NVR S
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTI 256
Query: 224 IHSYAVVNGLE-----------LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
I YA ++ DV TA+V Y + VE+A ++F+ M E+N SW
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
M++G R A LF M + +++ +++ + G + E KN FD+M +
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
+ + M+ ++G EA + M E + SF A V+ L+
Sbjct: 373 DPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE- 426
Query: 393 NLGKLL 398
LGK L
Sbjct: 427 -LGKQL 431
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 18/256 (7%)
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R I S + K G DSD N + Y + A VF+ MP VS++
Sbjct: 42 RATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG 100
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+G++ A K+F M + +V + V N G++ + ++
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVR------NRNLGKARELFEIMP- 153
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
E DV ++ Y++ G V+ A VF+ M EKN SW ++S N + A LF
Sbjct: 154 -ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
L +S++ +L + E + +FD M N++ + + ++ ++
Sbjct: 213 SRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVS-WNTIITGYAQS 263
Query: 353 GLIEEAYHIIRNMPTE 368
G I+EA + P +
Sbjct: 264 GKIDEARQLFDESPVQ 279
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 245/471 (52%), Gaps = 38/471 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTL 72
++ HL QLH +K+ L + SR + + + L + P P F +NT+
Sbjct: 46 SMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHP-RPNSFMWNTV 104
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IRA + + ++ LF +ML + PD ++P ++ A R G G ++H + K+GL
Sbjct: 105 IRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGEALHGMALKLGL 164
Query: 133 DSDKYIGNTLLRMYAAC-------------KEIDV------------------AKAVFEE 161
D Y+ N + MYA+C E+DV A++VF+
Sbjct: 165 AGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALARAGRVDEARSVFDA 224
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP R V +WS+M++ + S+AL +F M+ PN+ LVS++ C SL + G
Sbjct: 225 MPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLGCCASLGALVQG 284
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL---QSWTIMISGL 278
+H Y +G+ ++ + TALV+MY KCG V+ A +VF+ R + L SW M+ GL
Sbjct: 285 AWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAKLSSWNSMMQGL 344
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ A++LF+++ GL PD+++F A+L+A H G+ DE + F M+ + ++P
Sbjct: 345 AVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSEHGVEPG 404
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHYGC+VD L RAG + EA IR MP P+A I + L CR HG L +
Sbjct: 405 IEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDA-ELGARAAREA 463
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++ +P YVLAASV + G+ A + + + G+ KVPG S ++VN
Sbjct: 464 VRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIEVN 514
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 240/446 (53%), Gaps = 17/446 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-----SLSISLHFTRSLFNNLPVTPPLF 67
S ++H +HT LK D N+ + + L LH R + T +
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-----RTLDVV 284
Query: 68 AYNTLIRAY---AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
++ T++ AY K C +++ F M + + P+ +T+ V+ C + G +H
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQA---FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + VG + + N+++ +Y+ C E+ VF M RD+++WS++IA +
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A + RM+ PN L S++S C S+ + G+ +H++ + GLE + +AL+
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + +A K+F + ++ SWT MISG A++G AI LF + + GL+PDS+
Sbjct: 462 IMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSV 521
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L+ACSH G+VD G YF+ M++ Y+I P+ EHYGCM+D+L RAG + +A +IR+
Sbjct: 522 TFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRS 581
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP + + V+ + L ACR HG V +LKL+P ++ A++ + G W
Sbjct: 582 MPIQWDDVVWSTLLRACRIHGDV-DCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKE 640
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
AA + + + KG+ K PG S VKV D
Sbjct: 641 AANIRMLMKSKGVVKEPGWSSVKVKD 666
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 170/348 (48%), Gaps = 6/348 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P T + +I + S + F M ++ + D++ Y +KA
Sbjct: 173 VFDEMP-TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G S+H+ K G D + ++ N+L MY C ++D F +M DVVSW++++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
++ L+ F RM+ +N PN T +++S C + ++ GE +H++ + G
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+++ +++ +YSKCG + KVF M+ +++ +W+ +I+ + G G A ++M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
G KP+ + +++LS C + ++++GK + V ++ T ++ M + G I
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCGSI 470
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHG---QVLYLDDNLGKLLLK 400
EA I + + + + + + HG + + L +N+ K+ L+
Sbjct: 471 AEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 35/362 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R LF+ LP + ++ +I Y +S S E+++LF +M L++ LR D F +K CG
Sbjct: 69 RDLFDQLPQRDEV-SWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
L G ++H K GL + ++G+ LL MY EI + VF+EMP R+ V+W++
Sbjct: 128 LGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G V L F M + +S + A + G SIH+ + G
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + + +L MY+KCG ++ F MR ++ SWT +++ G+ + + F
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFK 307
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF-------------------------D 327
+M + + P+ +FSA++S C++ + G+
Sbjct: 308 RMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCG 367
Query: 328 EMARVYNIKPTMEH-----YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLG 379
E+A V + +M+ + ++ + G EEA+ + M +E PN L S L
Sbjct: 368 ELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLS 427
Query: 380 AC 381
C
Sbjct: 428 VC 429
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L++ + A+ +F+++P RD VSW+++I+G+V S+AL++F +M+L +E
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
L+SL + C +N G ++H ++V GL V +G+AL++MY K G + ++ K
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M +N +WT +I+GL G ++ F+ M ++ ++ DS +++ L A + G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 319 VDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++ G K FDE + V N + M + G ++ H R M T
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVAN---------SLTTMYNKCGKLDYGLHTFRKMRT 280
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++D+A +++ K H++ A +F+ + +++ SWT +ISG ++ + A+ LF+K
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 294 M-IQTGLKPDSISFSAILSACSHLGLVDEGKNY-FDEMARVYNIKPTMEHY----GCMVD 347
M +Q+ L+ D S L C LGL NY + +++K + + ++D
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCG-LGL-----NYLYGTNLHGFSVKXGLVNSVFVGSALLD 159
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAV 372
M + G I + + MPT NAV
Sbjct: 160 MYMKIGEIGRSCKVFDEMPTR-NAV 183
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 232/413 (56%), Gaps = 36/413 (8%)
Query: 72 LIRAYAKT-SCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+I+A+A + S S+++F M++ +G P+ +T+ FV KACG L + G + K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 130 VGLDSDKYIGNTLLRMYA-------------------------------ACKEIDVAKAV 158
+GL+S+ ++ N ++RMYA EI AK +
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 120
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+EM RDVVSW+++IAG+V +AL +FH M PN TL S ++AC +L+ +
Sbjct: 121 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVAL 180
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ--SWTIMIS 276
G IH Y + ++++ L +L++MY+KCG ++ A KVF+ L+ W MI
Sbjct: 181 DQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIG 240
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G A +G+ AI LF +M + P+ ++F A+L+ACSH LV+EG+ YF MA Y I+
Sbjct: 241 GYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIE 300
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P +EHYGCMVD+LGR+GL++EA + NMP P+A I + LGACR H + +GK
Sbjct: 301 PEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDI-ERGQRIGK 359
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++ +L+ + +VL A++ S SG WD A + I G K PGCS +++N
Sbjct: 360 IIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELN 412
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 4/213 (1%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ T+I Y + C E++ LF EML+TG P+ FT + AC + + G +H I
Sbjct: 131 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI 190
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF-EEMPVR-DVVSWSSMIAGFVACDSPSD 185
K + ++ + +LL MYA C EID A VF +E ++ V W++MI G+ +
Sbjct: 191 DKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKE 250
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALV 244
A+ +F +MK+ SPN VT V+L++AC+ V G S A G+E ++ +V
Sbjct: 251 AIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMV 310
Query: 245 EMYSKCGHVEKAFK-VFNLMREKNLQSWTIMIS 276
++ + G +++A + VFN+ + W ++
Sbjct: 311 DLLGRSGLLKEAEETVFNMPMAPDATIWGALLG 343
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 240/446 (53%), Gaps = 17/446 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-----SLSISLHFTRSLFNNLPVTPPLF 67
S ++H +HT LK D N+ + + L LH R + T +
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-----RTLDVV 284
Query: 68 AYNTLIRAY---AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
++ T++ AY K C +++ F M + + P+ +T+ V+ C + G +H
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQA---FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + VG + + N+++ +Y+ C E+ VF M RD+++WS++IA +
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A + RM+ PN L S++S C S+ + G+ +H++ + GLE + +AL+
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + +A K+F + ++ SWT MISG A++G AI LF + + GL+PDS+
Sbjct: 462 IMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSV 521
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F +L+ACSH G+VD G YF+ M++ Y+I P+ EHYGCM+D+L RAG + +A +IR+
Sbjct: 522 TFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRS 581
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP + + V+ + L ACR HG V +LKL+P ++ A++ + G W
Sbjct: 582 MPIQWDDVVWSTLLRACRIHGDV-DCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKE 640
Query: 425 AAELMVAINQKGLNKVPGCSWVKVND 450
AA + + + KG+ K PG S VKV D
Sbjct: 641 AANIRMLMKSKGVVKEPGWSSVKVKD 666
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 185/384 (48%), Gaps = 9/384 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRS--LFNNLPVTPPLFAYNTLIRAYAKT 79
LH +KT L ++ + S + + I RS +F+ +P T + +I +
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIG-EIGRSCKVFDEMP-TRNAVTWTAVITGLVRA 195
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S + F M ++ + D++ Y +KA + G S+H+ K G D + ++
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L MY C ++D F +M DVVSW++++ ++ L+ F RM+ +N
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T +++S C + ++ GE +H++ + G +++ +++ +YSKCG + KV
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M+ +++ +W+ +I+ + G G A ++M G KP+ + +++LS C + ++
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++GK + V ++ T ++ M + G I EA I + + + + + +
Sbjct: 436 EQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCGSIAEASKIFMD-SWKDDIISWTAMIS 493
Query: 380 ACRNHG---QVLYLDDNLGKLLLK 400
HG + + L +N+ K+ L+
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLR 517
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 35/362 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R LF+ LP + ++ +I Y +S S E+++LF +M L++ LR D F +K CG
Sbjct: 69 RDLFDQLPQRDEV-SWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
L G ++H K GL + ++G+ LL MY EI + VF+EMP R+ V+W++
Sbjct: 128 LGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G V L F M + +S + A + G SIH+ + G
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + + +L MY+KCG ++ F MR ++ SWT +++ G+ + + F
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFK 307
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF-------------------------D 327
+M + + P+ +FSA++S C++ + G+
Sbjct: 308 RMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCG 367
Query: 328 EMARVYNIKPTMEH-----YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLG 379
E+A V + +M+ + ++ + G EEA+ + M +E PN L S L
Sbjct: 368 ELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLS 427
Query: 380 AC 381
C
Sbjct: 428 VC 429
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L++ + A+ +F+++P RD VSW+++I+G+V S+AL++F +M+L +E
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
L+SL + C +N G ++H ++V GL V +G+AL++MY K G + ++ K
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ M +N +WT +I+GL G ++ F+ M ++ ++ DS +++ L A + G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 319 VDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++ G K FDE + V N + M + G ++ H R M T
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVAN---------SLTTMYNKCGKLDYGLHTFRKMRT 280
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++D+A +++ K H++ A +F+ + +++ SWT +ISG ++ + A+ LF+K
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 294 M-IQTGLKPDSISFSAILSACSHLGLVDEGKNY-FDEMARVYNIKPTMEHY----GCMVD 347
M +Q+ L+ D S L C LGL NY + +++K + + ++D
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCG-LGL-----NYLYGTNLHGFSVKTGLVNSVFVGSALLD 159
Query: 348 MLGRAGLIEEAYHIIRNMPTEPNAV 372
M + G I + + MPT NAV
Sbjct: 160 MYMKIGEIGRSCKVFDEMPTR-NAV 183
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 246/451 (54%), Gaps = 14/451 (3%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNN 59
+I RH+E + QLH L +K L N C+ + + + +L +F
Sbjct: 352 VIKRHLEGI-----------QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEE 400
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+ + ++N +I A+ + ++++ LF ML++ + PD+FTY VVKAC +
Sbjct: 401 MERRDAV-SWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNY 459
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H I K G+ D ++G+ L+ MY C + A+ + + + VSW+S+I+GF +
Sbjct: 460 GTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSS 519
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+A + F +M P++ T +++ C ++ + G+ IH+ + L DV +
Sbjct: 520 QKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYI 579
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+ LV+MYSKCG+++ + +F +++ +W+ MI A +G G AI+LF +M +
Sbjct: 580 ASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNV 639
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KP+ F ++L AC+H+G VD+G +YF +M Y + P MEHY CMVD+LGR+G + EA
Sbjct: 640 KPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEAL 699
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+I +MP E + VI R+ L C+ G V + LL+L+P+ + YVL A+V ++
Sbjct: 700 KLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNS-LLQLDPQDSSAYVLLANVYAIV 758
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
G W A++ + L K PGCSW++V D
Sbjct: 759 GMWGEVAKMRSIMKNCKLKKEPGCSWIEVRD 789
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 12/332 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
++ F +SLF+++P + ++N+L+ Y + +SI++F M + D T+ ++
Sbjct: 87 NMGFAQSLFDSMP-ERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVIL 145
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC G+G VH L ++G ++D G+ L+ MY+ CK++D A VF EMP R++V
Sbjct: 146 KACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLV 205
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
WS++IAG+V D + LK+F M + T S+ +C L + G +H +A
Sbjct: 206 CWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA 265
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + D +GTA ++MY+KC + A+KVFN + QS+ +I G A +G A+
Sbjct: 266 LKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKAL 325
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGCM 345
+F + + L D IS S L+ACS + EG + +NI +
Sbjct: 326 DIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA----NTI 381
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEP----NAVI 373
+DM G+ G + EA I M NA+I
Sbjct: 382 LDMYGKCGALMEACLIFEEMERRDAVSWNAII 413
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 163/345 (47%), Gaps = 9/345 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L ++ +++ S + + S L +F +P L ++ +I Y +
Sbjct: 159 QVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMP-ERNLVCWSAVIAGYVQN 217
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
IE +KLF +MLK G+ TY V ++C +G +H K D IG
Sbjct: 218 DRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG 277
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L MYA C+ + A VF +P S++++I G+ D AL +F ++ N
Sbjct: 278 TATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ ++L ++AC+ + G +H AV GL ++ + +++MY KCG + +A +
Sbjct: 338 FDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLI 397
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M ++ SW +I+ N +SLF M+++ ++PD ++ +++ AC+
Sbjct: 398 FEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAG---- 453
Query: 320 DEGKNYFDEM-ARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHI 361
+ NY E+ R+ ++ + +VDM G+ G++ EA I
Sbjct: 454 QQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 44/312 (14%)
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
T+ +++ C + G VH+ + G Y+ N LL+ Y +++ A VF+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 162 MPVRDVVSWSSMIAGFVAC----------DSPSD---------------------ALKVF 190
MP RDV+SW+++I G+ DS + ++++F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ + T ++ AC+ + + G +H A+ G E DV G+ALV+MYSKC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
++ AF+VF M E+NL W+ +I+G N R + LF M++ G+ +++++
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM----VDMLGRAGLIEEAYHIIRNMP 366
+C+ L G + +K + + +DM + + +A+ + +P
Sbjct: 247 RSCAGLSAFKLGTQLHG-----HALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLP 301
Query: 367 TEP----NAVIL 374
P NA+I+
Sbjct: 302 NPPRQSYNAIIV 313
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 235/440 (53%), Gaps = 21/440 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSL------SISLHFTRSLFNNLPVTPPLFAYNTLI 73
HQ+H L L++ T +++ F+ SL L R LF+ +P + +YN +I
Sbjct: 256 HQVHALVLRS-----TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV-SYNVII 309
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
AYA C+ ++LF EM K G Y ++ G + IG +H+ + +GL
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S+ +GN L+ MY+ C +D AK+ F + +SW+++I G+V +AL++F M
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ A P+ T S++ A +SL + G +HSY + +G + V G+ LV+MY+KCG +
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
++A + F+ M E+N SW +IS A G AI +F M+ G PDS++F ++L+AC
Sbjct: 490 DEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GL DE YF M Y+I P EHY C++D LGR G + ++ MP + + +I
Sbjct: 550 SHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPII 609
Query: 374 LRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
S L +CR HG + L ++ L +EP YV+ +++ + +G W+ AA +
Sbjct: 610 WTSILHSCRIHG-----NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 664
Query: 430 VAINQKGLNKVPGCSWVKVN 449
+ +G+ K G SWV++
Sbjct: 665 KIMRDRGVRKESGYSWVEIK 684
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 169/318 (53%), Gaps = 2/318 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN ++ +K ++++LF M + G+ +FT+ ++ + +G VH+L+
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + ++ N+LL Y+ C +D + +F+EMP RD VS++ +IA + + L+
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ + +++S SL +V G+ IH+ V+ GL + LG AL++MYS
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 383
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ A F+ EK+ SWT +I+G NG+ A+ LF+ M + GL+PD +FS+
Sbjct: 384 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
I+ A S L ++ G+ + R K ++ +VDM + G ++EA MP E
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-E 501
Query: 369 PNAVILRSFLGACRNHGQ 386
N++ + + A ++G+
Sbjct: 502 RNSISWNAVISAYAHYGE 519
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 171/378 (45%), Gaps = 26/378 (6%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF---------A 68
HLH+ +F + H IL++ S S +LP LF
Sbjct: 58 HLHRARAMF--DQMPHKNIFSLNLILSAYSSS--------GDLPAAQHLFLSSPHRNATT 107
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++RA+A + +++ LF ML G+ PD T V+ G C + S+H
Sbjct: 108 WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-CTV----PSLHPFAI 162
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K GLD+ ++ NTLL Y + A+ VF EM +D V++++M+ G + AL+
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ A T S+++ + ++ G +H+ + + L+V + +L++ YS
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC ++ ++F+ M E++ S+ ++I+ A N + LF +M + G + ++
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LS L V GK ++ + + ++DM + G+++ A N +E
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR-SE 400
Query: 369 PNAVILRSFLGACRNHGQ 386
+A+ + + +GQ
Sbjct: 401 KSAISWTALITGYVQNGQ 418
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS----------------- 169
+ K G D Y N LR + + A+A+F++MP +++ S
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 170 --------------WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS--ACT 213
W+ M+ A SDAL +F M P+ VT+ ++++ CT
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
S+H +A+ GL+ V + L++ Y K G + A +VF M +K+ ++
Sbjct: 154 V-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
M+ G + G A+ LFA M + G+ +FS+IL+
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 235/440 (53%), Gaps = 21/440 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSL------SISLHFTRSLFNNLPVTPPLFAYNTLI 73
HQ+H L L++ T +++ F+ SL L R LF+ +P + +YN +I
Sbjct: 256 HQVHALVLRS-----TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV-SYNVII 309
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
AYA C+ ++LF EM K G Y ++ G + IG +H+ + +GL
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S+ +GN L+ MY+ C +D AK+ F + +SW+++I G+V +AL++F M
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ A P+ T S++ A +SL + G +HSY + +G + V G+ LV+MY+KCG +
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
++A + F+ M E+N SW +IS A G AI +F M+ G PDS++F ++L+AC
Sbjct: 490 DEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GL DE YF M Y+I P EHY C++D LGR G + ++ MP + + +I
Sbjct: 550 SHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPII 609
Query: 374 LRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
S L +CR HG + L ++ L +EP YV+ +++ + +G W+ AA +
Sbjct: 610 WTSILHSCRIHG-----NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 664
Query: 430 VAINQKGLNKVPGCSWVKVN 449
+ +G+ K G SWV++
Sbjct: 665 KIMRDRGVRKESGYSWVEIK 684
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 169/318 (53%), Gaps = 2/318 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN ++ +K ++++LF M + G+ +FT+ ++ + +G VH+L+
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + ++ N+LL Y+ C +D + +F+EMP RD VS++ +IA + + L+
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ + +++S SL +V G+ IH+ V+ GL + LG AL++MYS
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 383
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ A F+ EK+ SWT +I+G NG+ A+ LF+ M + GL+PD +FS+
Sbjct: 384 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
I+ A S L ++ G+ + R K ++ +VDM + G ++EA MP E
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-E 501
Query: 369 PNAVILRSFLGACRNHGQ 386
N++ + + A ++G+
Sbjct: 502 RNSISWNAVISAYAHYGE 519
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 171/378 (45%), Gaps = 26/378 (6%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF---------A 68
HLH+ +F + H IL++ S S +LP LF
Sbjct: 58 HLHRARAMF--DQMPHKNIFSLNLILSAYSSS--------GDLPAAQHLFLSSPHRNATT 107
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++RA+A + +++ LF ML G+ PD T V+ G C + S+H
Sbjct: 108 WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-CTV----PSLHPFAI 162
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K GLD+ ++ NTLL Y + A+ VF EM +D V++++M+ G + AL+
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ A T S+++ + ++ G +H+ + + L+V + +L++ YS
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC ++ ++F+ M E++ S+ ++I+ A N + LF +M + G + ++
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LS L V GK ++ + + ++DM + G+++ A N +E
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR-SE 400
Query: 369 PNAVILRSFLGACRNHGQ 386
+A+ + + +GQ
Sbjct: 401 KSAISWTALITGYVQNGQ 418
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS----------------- 169
+ K G D Y N LR + + A+A+F++MP +++ S
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 170 --------------WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS--ACT 213
W+ M+ A SDAL +F M P+ VT+ ++++ CT
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
S+H +A+ GL+ V + L++ Y K G + A +VF M +K+ ++
Sbjct: 154 V-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
M+ G + G A+ LFA M + G+ +FS+IL+
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 216/390 (55%), Gaps = 5/390 (1%)
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
V PP AYN I ++ ++ L EM G R D +T P + + LL
Sbjct: 2 VVPPGVAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSAA--LLRLPAD 59
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
++HSL+ + GL + ++ N L+ YA A+AVF+EMP RDVVSW+S++ G
Sbjct: 60 ALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSR 119
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
S AL+V+ M A P+ + + +S+C + G S+H+ AV L+ +++G
Sbjct: 120 SHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGN 179
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQ--SWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+LV MY+K G + +A KVF+ R +WT +I G A NGRG ++ ++A M+++G
Sbjct: 180 SLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGC 239
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
+PD ++F +L ACSH GLVD G+ +F M + I P +HY CMVD+LGRAG ++EA
Sbjct: 240 RPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAM 299
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ T +A + ++ L ACR H L ++ ++ +L+P YV+ +++ S +
Sbjct: 300 DLLNRSTTRLDATVWKALLAACRTHRNA-ELAEHAAAMVWRLDPTDAVPYVMLSNLYSRA 358
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G W A + ++ +G+ K PGCSWV N
Sbjct: 359 GRWGDVARVRTSMKARGITKEPGCSWVAAN 388
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 228/405 (56%), Gaps = 9/405 (2%)
Query: 49 SLHFTRSLFN----NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTY 104
SLH RS+F+ N V P +N +I Y+++ CS E+++L+ +M + G+ D +TY
Sbjct: 318 SLHDARSVFDTNFINCGVNTP---WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 374
Query: 105 PFVVKACGRCLLIGIGGSVHSLIFKVGLD-SDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
V A + G VH ++ K GLD + N + Y+ C ++ + VF+ M
Sbjct: 375 CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 434
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RD+VSW++++ + +AL F M+ +PN T S++ +C SL + G
Sbjct: 435 ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ 494
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H GL+ + + +AL++MY+KCG + +A KVF+ + ++ SWT +ISG A +G
Sbjct: 495 VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGL 554
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF +M +G+K ++++ +L ACSH G+V+EG YF +M Y + P MEHY
Sbjct: 555 VEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYA 614
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
C++D+LGR G +++A IR MP EPN ++ ++ LG CR HG V L + + +L + P
Sbjct: 615 CIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV-ELGEIAARKILSIRP 673
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
E A YVL ++ +G+++ L + +G+ K PG SW+ V
Sbjct: 674 EYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 718
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 137/259 (52%), Gaps = 3/259 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P +F++ +I + + K F EML +G+ PD F Y ++++C
Sbjct: 123 VFDEMP-QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD 181
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G VH+ I G + ++ +LL MYA I+ + VF M + VSW++MI+
Sbjct: 182 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 241
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G + +A +F RMK +PN TLVS+ A L++V G+ + + A G+E
Sbjct: 242 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 301
Query: 236 DVALGTALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+V +GTAL++MYSKCG + A VF N + W MISG + +G A+ L+ +
Sbjct: 302 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 361
Query: 294 MIQTGLKPDSISFSAILSA 312
M Q G+ D ++ ++ +A
Sbjct: 362 MCQNGITSDLYTYCSVFNA 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKY--IGNTLLRMYAACKEIDVAKAVFEEMPV 164
V++ C I +VH L+ K + + N +Y+ C E A VF+EMP
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
R+V SW+ MI G D K F M + P+ +++ +C L ++ G+ +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H+ V+ G + + T+L+ MY+K G +E ++ VFN+M E N SW MISG NG
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A LF +M P+ + ++ A L V+ GK A I+ +
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE-VQNCASELGIEGNVLVGTA 308
Query: 345 MVDMLGRAGLIEEAYHIIRN------MPTEPNAVILRSFLGACRNHGQVLYLD 391
++DM + G + +A + + T NA+I C LY+
Sbjct: 309 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 361
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 249/447 (55%), Gaps = 9/447 (2%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
IQL+K VH + + L L NT ++S L S SL R LF+ +P + +
Sbjct: 242 IQLAKIVHCIAIVSKL--SGDLLVNTAVLS---LYSKLRSLVDARKLFDKMPEKDRV-VW 295
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N +I AYA+ E ++LF M ++G+R D FT V+ + + + G H+ I +
Sbjct: 296 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 355
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G DS + N+L+ MY CK +D A +F M + V+SWS+MI G+V AL +
Sbjct: 356 NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL 415
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +MK + V +++++ A + + + +H Y++ GL +L TAL+ Y+K
Sbjct: 416 FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAK 475
Query: 250 CGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
CG +E A ++F + +K+L W MIS A++G + L+ +M + KPD ++F
Sbjct: 476 CGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFL 535
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+L+AC + GLV++GK +F EM Y +P+ EHY CMV++LGRAGLI EA +++NMP
Sbjct: 536 GLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPI 595
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+P+A + L AC+ H L + + L+ +EP NY+L +++ + +G WD A+
Sbjct: 596 KPDARVWGPLLSACKMHPGS-KLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAK 654
Query: 428 LMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ + KGL K+PGCSW+++N E
Sbjct: 655 MRSFLRNKGLKKIPGCSWLEINGHVTE 681
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 182/375 (48%), Gaps = 4/375 (1%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSLFNNLPVTPPLFAYNTLI 73
++ HL Q+H F+ N + S+ I ++ L + + +F ++ + P L +N ++
Sbjct: 39 SIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV-IDPNLTLFNAIL 97
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R + S ++ ++ +M+ + PD TYPFV+++C +G G ++H + K+G D
Sbjct: 98 RNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFD 157
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ L MY C E + A +F++ V+D+ SS+ D+ +VF RM
Sbjct: 158 LFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRM 217
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
P+S T +L+ L +++ + +H A+V+ L D+ + TA++ +YSK +
Sbjct: 218 IAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSL 277
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
A K+F+ M EK+ W IMI+ A G+ + LF M ++G++ D + ++S+
Sbjct: 278 VDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSI 337
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+ L VD GK + R + H ++DM +++ A I N T+ + +
Sbjct: 338 AQLKCVDWGKQTHAHILRNGSDSQVSVH-NSLIDMYCECKILDSACKIF-NWMTDKSVIS 395
Query: 374 LRSFLGACRNHGQVL 388
+ + +GQ L
Sbjct: 396 WSAMIKGYVKNGQSL 410
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++F M+ L PD+FT+ +++ I + VH + L D + +L +
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y+ + + A+ +F++MP +D V W+ MIA + P++ L++F M + + T
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
+ ++S+ L V G+ H++ + NG + V++ +L++MY +C ++ A K+FN M +
Sbjct: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
K++ SW+ MI G NG+ A+SLF+KM G++ D + IL A H+G ++ K Y
Sbjct: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVK-Y 449
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL-RSFLGACRNH 384
+ + ++ + G IE A + + +I+ S + A NH
Sbjct: 450 LHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANH 509
Query: 385 G 385
G
Sbjct: 510 G 510
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 256/496 (51%), Gaps = 69/496 (13%)
Query: 21 QLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H KT L + + + +L ++S +LH+ LF++ P P F +NTLIR+ +
Sbjct: 20 QIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFP-NPDTFMHNTLIRSLS 78
Query: 78 KTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ + S+ F ++ + L PD+FT+ F +KA + G +HS F+ G D+
Sbjct: 79 LSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHI 138
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEE-------------------------------MPVR 165
++G TL+ MYA C + A+ VF+E MPVR
Sbjct: 139 FVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVR 198
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHRMKLANE--------------------------- 198
++ SW+ M+AG+ A +VF+ M L +E
Sbjct: 199 NLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELL 258
Query: 199 ----SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
N V+L ++SAC G+ +H + G ++ AL++ YSKCG+V
Sbjct: 259 REEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVA 318
Query: 255 KAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
A VF N+ +++ SWT +I+GLA +G G AI LF +M ++G++PD I+F ++L AC
Sbjct: 319 MARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYAC 378
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GLV+EG F +M +Y I+P +EHYGCMVD+ GRA +++AY I MP PNA+I
Sbjct: 379 SHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAII 438
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
R+ LGAC HG + + + + L +++P+ ++VL ++V +++G W + + +
Sbjct: 439 WRTLLGACSIHGNI-EMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMT 497
Query: 434 QKGLNKVPGCSWVKVN 449
+ + K PG S ++++
Sbjct: 498 EHSMKKTPGWSMIEID 513
>gi|15228119|ref|NP_181269.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216847|sp|Q9ZUT4.1|PP192_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37320
gi|4056486|gb|AAC98052.1| hypothetical protein [Arabidopsis thaliana]
gi|37202040|gb|AAQ89635.1| At2g37320 [Arabidopsis thaliana]
gi|51969760|dbj|BAD43572.1| hypothetical protein [Arabidopsis thaliana]
gi|330254289|gb|AEC09383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 220/383 (57%), Gaps = 6/383 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDE---MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
L R S +E + L D + + G D + V++CG G H L
Sbjct: 88 LSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLAL 147
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G SD Y+G++L+ +Y E++ A VFEEMP R+VVSW++MI+GF LK
Sbjct: 148 KGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+ + PN T +L+SACT + G S+H + GL+ + + +L+ MY
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFS 307
KCG ++ AF++F+ K++ SW MI+G A +G AI LF M+ ++G KPD+I++
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYL 327
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LS+C H GLV EG+ +F+ MA + +KP + HY C+VD+LGR GL++EA +I NMP
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+PN+VI S L +CR HG V + + L LEP+ A +V A++ + G W AA
Sbjct: 387 KPNSVIWGSLLFSCRVHGDV-WTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAAT 445
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + KGL PGCSW+++N+
Sbjct: 446 VRKLMKDKGLKTNPGCSWIEINN 468
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++N++I YA+ ++++I+LF+ M+ K+G +PD TY V+ +C L+ G +L
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ + GL + + L+ + + A + E MP++
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK--------------------- 387
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVE 245
PNSV SL+ +C +V G I + LE D A L
Sbjct: 388 -------------PNSVIWGSLLFSCRVHGDVWTG--IRAAEERLMLEPDCAATHVQLAN 432
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQS 270
+Y+ G+ ++A V LM++K L++
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKT 457
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 229/412 (55%), Gaps = 9/412 (2%)
Query: 39 SRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR 98
+R + T +S R +F +P L ++NT+I A+ E++++ EM L+
Sbjct: 178 TRSVRTVSVLSEDSVRKIFEMMP-EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLK 236
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAV 158
PD+FT V+ + I G +H + GLD+D Y+ ++L+ MYA C + + V
Sbjct: 237 PDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F + RD +SW+S+IAG V + L+ F +M +A P S + S++ AC L +
Sbjct: 297 FTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTL 356
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G+ +H Y NG + ++ + ++LV+MY+KCG++ A ++F+ MR +++ SWT MI G
Sbjct: 357 HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGC 416
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ AI LF +M G+K A+L+ACSH GLVDE YF+ M R + I P
Sbjct: 417 ALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPG 469
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+EHY + D+LGRAG +EEAY I M P I + L ACR H + + + + +
Sbjct: 470 VEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI-DMAEKVANRI 528
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L+++P Y+L A++ S + W AA+ ++ + G+ K P CSW++V +
Sbjct: 529 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 580
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 191/405 (47%), Gaps = 35/405 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
K+ QLH LK + + S LH + LFN + PP A+ ++I
Sbjct: 20 KSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHF-PPALAWKSVI 78
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R Y +S+ F ML +GL PD+ +P V+K+C + + +G S+H I +VGLD
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138
Query: 134 SDKYIGNTLLRMYAACKEI--------------------------------DVAKAVFEE 161
D Y GN L+ MY+ + + D + +FE
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
MP +D+VSW+++IAG + L++ M AN P+S TL S++ +++ G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH ++ GL+ D+ + ++L++MY+KC V + +VF L+ E++ SW +I+G N
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G + + F +M+ +KP S SFS+I+ AC+HL + GK + R +
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFI 377
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G I A I M + V + + C HGQ
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQ 421
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 242/431 (56%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L +++ L + + + I + SL +F++L + ++ +I +A
Sbjct: 608 QIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIGGFADQ 666
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ +LF +M G +P T+ ++KAC + G V + I G + D +G
Sbjct: 667 GEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG 726
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ Y+ + A+ VF++MP RD++SW+ MIAG+ AL+ ++M+
Sbjct: 727 NALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVV 786
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N + VS+++AC+S + G+ +H+ V ++ DV +G AL+ MY+KCG +E+A +V
Sbjct: 787 LNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEV 846
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ EKN+ +W MI+ A +G + A+ F M + G+KPD +F++ILSAC+H GLV
Sbjct: 847 FDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLV 906
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG F + + + PT+EHYGC+V +LGRAG +EA +I MP P+A + + LG
Sbjct: 907 MEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLG 966
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR HG V L ++ LKL A YVL ++V + +G WD A++ + +G+ K
Sbjct: 967 ACRIHGNVA-LAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRK 1025
Query: 440 VPGCSWVKVND 450
PG SW++V++
Sbjct: 1026 EPGRSWIEVDN 1036
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 149/270 (55%), Gaps = 1/270 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LFN +P L ++N +I YA+ E++KL+ +M G++P T+ ++ AC
Sbjct: 440 RELFNTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G +H I + G+ S+ ++ N L+ MY C I A+ VFE RD++SW+SM
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG S A K+F MK P+ +T S++ C + + G IH + +GL
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGL 618
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+LDV LG AL+ MY +CG ++ A++VF+ +R +N+ SWT MI G AD G A LF +
Sbjct: 619 QLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQ 678
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGK 323
M G KP +FS+IL AC +DEGK
Sbjct: 679 MQNDGFKPVKSTFSSILKACMSSACLDEGK 708
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 2/320 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N++I +A+ + KLF EM K GL PD T+ V+ C + +G +H
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
LI + GL D +GN L+ MY C + A VF + R+V+SW++MI GF
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A ++F +M+ P T S++ AC S + G+ + ++ + +G ELD +G AL+
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALIS 731
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
YSK G + A KVF+ M +++ SW MI+G A NG G A+ +M + G+ + S
Sbjct: 732 AYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +IL+ACS ++EGK E+ + ++ + ++ M + G +EEA + N
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVK-RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 366 PTEPNAVILRSFLGACRNHG 385
TE N V + + A HG
Sbjct: 851 -TEKNVVTWNAMINAYAQHG 869
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 173/318 (54%), Gaps = 2/318 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
YN LI A A+ E+ + + +M G+ + TY V+ AC +G G +HS I
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+VG SD IGN+L+ MYA C ++ A+ +F MP RD++SW+++IAG+ + +A+K
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+ P VT + L+SACT+ G+ IH + +G++ + L AL+ MY
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+CG + +A VF R +++ SW MI+G A +G A LF +M + GL+PD I+F++
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFAS 592
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+L C + ++ G+ + ++ + +++M R G +++AY + ++
Sbjct: 593 VLVGCKNPEALELGRQ-IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL-RH 650
Query: 369 PNAVILRSFLGACRNHGQ 386
N + + +G + G+
Sbjct: 651 RNVMSWTAMIGGFADQGE 668
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 16/347 (4%)
Query: 31 LDHNTCIISRFILTSLSISLHFTRSLFN------NLPVTPPLFA---------YNTLIRA 75
L++ I S+ I SL N +LP +F+ YNT++
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
YA+ + E I LF +M G+ PD TY ++ A ++ G +H L GL+SD
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+G L M+ C ++ AK E RDVV ++++IA +A + +++M+
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
N T +S+++AC++ + AGE IHS+ G DV +G +L+ MY++CG + +
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A ++FN M +++L SW +I+G A A+ L+ +M G+KP ++F +LSAC++
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+GK +++ R IK +++M R G I EA ++
Sbjct: 499 SSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVF 544
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 154/312 (49%), Gaps = 5/312 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N+LI YA+ ++ +LF+EM G P TY ++ AC + G +HS
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I + G D + N+LL MY C+++ A+ VF + RDVVS+++M+ + +
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ +F +M P+ VT ++L+ A T+ + G+ IH AV GL D+ +GTAL
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+ +CG V A + ++++ + +I+ LA +G A + +M G+ + +
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++L+ACS + G+ ++ V + ++ ++ M R G + A + M
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 366 PTEP----NAVI 373
P NA+I
Sbjct: 447 PKRDLISWNAII 458
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 117/220 (53%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y +V+ C R + +H+ + + G+ D ++ N L+ MY C+ + A VF +MP
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
RDV+SW+S+I+ + A ++F M+ A P+ +T +S+++AC S + G+
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IHS + G + D + +L+ MY KC + A +VF+ + +++ S+ M+ A
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAY 264
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
I LF +M G+ PD +++ +L A + ++DEGK
Sbjct: 265 VEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N V LV CT ++ + IH+ V G+ D+ L L+ MY KC V A +VF
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
M +++ SW +IS A G A LF +M G P I++ +IL+AC ++
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 321 EGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK ++ Y P +++ +++M G+ + A + + + V + LG
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTMLG 257
Query: 380 ACRNHGQVLYLDDNLG 395
+ Q Y+++ +G
Sbjct: 258 L---YAQKAYVEECIG 270
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 223/390 (57%), Gaps = 10/390 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ T+I Y K ++E+ LF +M + D + ++ C + + + SVHS
Sbjct: 217 IISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHS 276
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L+ K G + + N L+ MYA C + A+ +F+ + + ++SW+SMIAG+V P +
Sbjct: 277 LVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGE 336
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F RM + PN TL ++VSAC L ++ G+ I Y +NGLE D + T+L+
Sbjct: 337 ALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIH 396
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSI 304
MYSKCG + KA +VF + +K+L WT MI+ A +G GN AISLF KM G+ PD+I
Sbjct: 397 MYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAI 456
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
++++ ACSH GLV+EG YF M + + I PT+EH C++D+LGR G ++ A + I+
Sbjct: 457 VYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQG 516
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSG 420
MP + A + L ACR HG V LG+L LL P +YVL A++ + G
Sbjct: 517 MPPDVQAQVWGPLLSACRIHGNV-----ELGELATVRLLDSSPGSSGSYVLMANLYTSLG 571
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVND 450
W A + +++ KGL K G S V+V D
Sbjct: 572 KWKEAHMMRNSMDGKGLVKESGWSQVEVTD 601
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 135/252 (53%), Gaps = 4/252 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L+ +N +IR +++ ++ M +G+ +N TYP ++KAC I G +H
Sbjct: 11 LYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHG 70
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K+G +D ++ L+ MY+ C + A+ VF+EMP R VVSW++M++ + S
Sbjct: 71 HVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQ 130
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVR---AGESIHSYAVVNGL-ELDVALGT 241
AL + M + P + T VS++S ++L + G+SIH + G+ L+V+L
Sbjct: 131 ALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLAN 190
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L+ MY + +++A KVF+LM EK++ SWT MI G G A LF +M +
Sbjct: 191 SLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGI 250
Query: 302 DSISFSAILSAC 313
D + F ++S C
Sbjct: 251 DFVVFLNLISGC 262
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%)
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
R + +W+ MI + L ++ M + N++T L+ AC +L +++ G +
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H + + G + D + TALV+MYSKC HV A +VF+ M ++++ SW M+S +
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+ A+SL +M G +P + +F +ILS S+L
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYSNL 160
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
++L +W +MI +NG +++++ M +G+ +++++ +L AC++L + G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ ++ T +VDM + + A + MP
Sbjct: 68 LHGHVLKLGFQADTFVQTA-LVDMYSKCSHVASARQVFDEMP 108
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 229/401 (57%), Gaps = 2/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ R +F+ + + L ++NT+I Y + E++ +F EM G + FT V+
Sbjct: 112 VELARQVFDGM-LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG +H L K +D + Y+G LL +YA C I A VFE M + V+
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WSSM+AG+V + +AL ++ R + + N TL S++ AC++L + G+ +H+
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G +V + ++ V+MY+KCG + +++ +F+ ++EKNL+ W +ISG A + R +
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF KM Q G+ P+ ++FS++LS C H GLV+EG+ +F M Y + P + HY CMVD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GRAGL+ EAY +I+++P +P A I S L +CR + L L + + L +LEPE N+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN-LELAEVAAEKLFELEPENAGNH 469
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + + W+ A+ + + KV G SW+ + D
Sbjct: 470 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 15/333 (4%)
Query: 67 FAYNTLIRA-----YAKTSCSIESIKLFDEMLKTGLRPDNFTYPF--------VVKACGR 113
F N LIR + TS +I + + + P ++ F +++ C R
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + H I ++ L+ D + N L+ Y+ C +++A+ VF+ M R +VSW++M
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I + S+AL +F M+ + T+ S++SAC + + +H +V +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L++ +GTAL+++Y+KCG ++ A +VF M++K+ +W+ M++G N A+ L+ +
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ L+ + + S+++ ACS+L + EGK + + + VDM + G
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKCG 312
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ E+Y II + E N + + + H +
Sbjct: 313 SLRESY-IIFSEVQEKNLELWNTIISGFAKHAR 344
>gi|356542056|ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 595
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 233/403 (57%), Gaps = 24/403 (5%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGR---CLLIGI 119
P LF +NTLIR +SI +F GL D +TY FV+ AC R + +
Sbjct: 191 PDLFLFNTLIRCVQPN----DSILIFRNEFSRGLMFFDEYTYNFVLGACARSPSASTLWV 246
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+LI K G++S+ + T + YA+ K+I ++ VF+EMP R V+W++MI G+ +
Sbjct: 247 GRQLHALIVKHGVESNIVVPTTKVYFYASNKDIISSRKVFDEMPRRSTVTWNAMITGYSS 306
Query: 180 CDSPS-----DALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESIHSYA--VV 230
+ +AL +F M ++ P + T+VS++SA + + + G IH +A V
Sbjct: 307 LKEGNKKYALNALYLFIDMLIDVSGIKPTATTIVSVLSAVSQIGMLETGACIHGFAEKTV 366
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
E DV +GT LV+MYSKCG ++ A VF M +KN+ +WT M +GLA +G+G ++ +
Sbjct: 367 CTPEDDVFIGTGLVDMYSKCGCLDSALSVFWRMNQKNIMTWTAMTTGLAIHGKGKQSLEV 426
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
KM G+KP+ +F++ LSAC H GLV+EG F EM R + + P ++HYGC+VD+LG
Sbjct: 427 LYKMGAYGVKPNEATFTSFLSACCHGGLVEEGLQLFLEMKRTFGVMPQIQHYGCIVDLLG 486
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA--- 407
RAG +EEAY I MP P+AVI RS L AC HG V+ + + +GK LL+LE A
Sbjct: 487 RAGKLEEAYDFIMQMPINPDAVIWRSLLAACNIHGDVV-MGEKVGKFLLQLEEWSSAESP 545
Query: 408 ---NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+Y+ ++V +L+ WD + + + K + G S V+
Sbjct: 546 KSEDYIALSNVYALAEKWDDVETVRIKMKAKSILNKAGSSAVQ 588
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 243/440 (55%), Gaps = 25/440 (5%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF-------TRSLFN------NLPVTPPLF 67
QLH +KT C F+ TSL IS++ R +F+ NL V
Sbjct: 77 QLHGHVIKTG-----CEPEPFVQTSL-ISMYCKCSTIASARKVFDENHHSRNLAV----- 125
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
YN LI Y+ S +++ LF +M K G+ + T ++ C + +G G S+H+
Sbjct: 126 CYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACS 185
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ GLD D +GN LL MY C +D A+ +F+ MP + +++W++MI+G+ L
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVL 245
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++ +M+ P+ VTLV ++S+C L AG + ++G + L AL+ MY
Sbjct: 246 DLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMY 305
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
++CG++ KA +F+ M EKN+ SWT +I+G +G+G A+ LF +MI + PD +F
Sbjct: 306 ARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFV 365
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++LSACSH GL ++G YF M R Y ++P EHY C+VD+LGRAG +EEA +I +M
Sbjct: 366 SVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSV 425
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP+ + + LGAC+ H V + K +++ EP YVL +++ S +GN +
Sbjct: 426 EPDGAVWGALLGACKIHRNVELAELAFEK-VIEFEPTNIGYYVLLSNIFSEAGNMEGILR 484
Query: 428 LMVAINQKGLNKVPGCSWVK 447
+ V + ++ L K PGCS+V+
Sbjct: 485 VRVMMRERKLKKEPGCSYVE 504
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 200/386 (51%), Gaps = 23/386 (5%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +R A+ E++ L+ +ML +G P+ FT+PF K+C L G +H +
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE-MPVRDV-VSWSSMIAGFVACDSPSD 185
K G + + ++ +L+ MY C I A+ VF+E R++ V ++++IAG+ SD
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ +F +M+ S N+VT++ L+ C I++ G S+H+ +V GL+ D+++G L+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY +CG V+ A K+F+ M EK L +W MISG A NG + + L+ KM TG+ PD ++
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 306 FSAILSACSHLGLVDEGKNYFDEMA-RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+LS+C+HLG G+ + + P +++ +++M R G + +A I
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDG 320
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL--------GANYVLAASVS 416
M TE N + + + HGQ G+L ++L E+ GA +V S
Sbjct: 321 M-TEKNVISWTAIIAGYGMHGQ--------GELAVQLFDEMISSDELPDGAAFVSVLSAC 371
Query: 417 SLSGNWDTAAELMVAINQK-GLNKVP 441
S +G + A+ + GL P
Sbjct: 372 SHAGLTEKGLYYFTAMERDYGLQPGP 397
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 243/430 (56%), Gaps = 15/430 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+HT +K+ + ++ I+S I L + L + LFN L + ++N +I Y K
Sbjct: 217 VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFN-LCSARDVVSWNAMIDGYVKHV 275
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL--IFKVGLDSDKYI 138
+ +FD M+ D ++ ++ I G + +F + +
Sbjct: 276 EMGHARMVFDRMVCR----DVISWNTMING------YAIVGKIDEAKRLFDEMPERNLVS 325
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N++L + C ++ A +F EMP RDVVSW+SM+A + C P++AL +F +M+
Sbjct: 326 WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P T+VSL+SAC L + G +H+Y N +E++ +GTALV+MY+KCG + A +
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VFN M K++ +W +I+G+A +G A LF +M + G++P+ I+F AILSACSH G+
Sbjct: 446 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 505
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
VDEG+ D M+ Y I+P +EHYGC++D+L RAG +EEA +I MP EPN L + L
Sbjct: 506 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 565
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
G CR HG L + +GK L+ L+P Y+L +++ + + WD A ++ + G++
Sbjct: 566 GGCRIHGN-FELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 624
Query: 439 KVPGCSWVKV 448
KVPG S +++
Sbjct: 625 KVPGVSVIEL 634
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 200/403 (49%), Gaps = 49/403 (12%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCI-----ISRFILTSLSISLHFTRSLFNN 59
I +L KT+ HL Q+H + HN+ S L+ L + +++F++
Sbjct: 98 QILSLFNPCKTLRHLKQVHAQIIT---HHNSPFQLSALASLSALSPFPTFLAYAKTIFHH 154
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L PP YN+LIRA + + +E++ L+ ML++GL+PD+ TYPFV+KAC +
Sbjct: 155 LQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWF 213
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G VH+ + K G + D YI ++L+ +YA K++ AK +F RDVVSW++MI G+V
Sbjct: 214 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 273
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL------ 233
A VF RM C +I+ I+ YA+V +
Sbjct: 274 HVEMGHARMVFDRM-----------------VCRDVISWNT--MINGYAIVGKIDEAKRL 314
Query: 234 -----ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
E ++ +++ + KCG+VE AF +F+ M +++ SW M++ A G+ N A+
Sbjct: 315 FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 374
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF----DEMARVYNIKPTMEHYGC 344
+LF +M G+KP + ++LSAC+HLG +D+G + D V +I T
Sbjct: 375 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT-----A 429
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+VDM + G I A + M ++ + + + + HG V
Sbjct: 430 LVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGNV 471
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 237/453 (52%), Gaps = 32/453 (7%)
Query: 10 IQLSKTVH----HLHQLHTLFLKTSL----DHNTCIISRFILTSLSISLHFTRSLFNNLP 61
+ LSK VH ++ + F+ T+L N C+ IL F R F+
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL--------FERHNFD--- 481
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
L A+N ++ Y ++ +++KLF M K G R D+FT V K CG I G
Sbjct: 482 ----LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ K G D D ++ + +L MY C ++ A+ F+ +PV D V+W++MI+G +
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A VF +M+L P+ T+ +L A + L + G IH+ A+ D +GT
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MY+KCG ++ A+ +F + N+ +W M+ GLA +G G + LF +M G+KP
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D ++F +LSACSH GLV E + M Y IKP +EHY C+ D LGRAGL+++A ++
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSS 417
I +M E +A + R+ L ACR G D GK LL+LEP + YVL +++ +
Sbjct: 778 IESMSMEASASMYRTLLAACRVQG-----DTETGKRVATKLLELEPLDSSAYVLLSNMYA 832
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ WD + + K PG SW++V +
Sbjct: 833 AASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 183/371 (49%), Gaps = 10/371 (2%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H + LK LD + + I + F R++F+N+ L ++N++I A+
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAGIAQ 393
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL-IGIGGSVHSLIFKVGLDSDKY 137
+E++ LF ++L+ GL+PD +T V+KA + + VH K+ SD +
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ Y+ + + A+ +FE D+V+W++M+AG+ LK+F M
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
E + TL ++ C L + G+ +H+YA+ +G +LD+ + + +++MY KCG + A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
F+ + + +WT MISG +NG A +F++M G+ PD + + + A S L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+++G+ A + T + + +VDM + G I++AY + + + N
Sbjct: 633 ALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWN 688
Query: 376 SFLGACRNHGQ 386
+ L HG+
Sbjct: 689 AMLVGLAQHGE 699
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+K F +M+++ + D T+ ++ + + +G VH + K+GLD + N+L+ M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y ++ A+ VF+ M RD++SW+S+IAG +A+ +F ++ P+ T+
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 206 VSLVSACTSLIN-VRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
S++ A +SL + + +H +A+ +N + D + TAL++ YS+ +++A +F
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALIDAYSRNRCMKEAEILFE-R 477
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+L +W M++G + G+ + LFA M + G + D + + + C L +++GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 324 NYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
Y IK + ++DM + G + A ++P P+ V + +
Sbjct: 538 Q-----VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMIS 591
Query: 380 ACRNHGQ 386
C +G+
Sbjct: 592 GCIENGE 598
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G H+ I + ++++ N L+ MY+ C + A+ VF++MP RD+VSW+S++A +
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 179 -----ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
++ A +F ++ + +TL ++ C V A ES H YA GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D + ALV +Y K G V++ +F M +++ W +M+ + G AI L +
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 294 MIQTGLKPDSISF 306
+GL P+ I+
Sbjct: 237 FHSSGLNPNEITL 249
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF +P + +N +++AY + E+I L +GL P+ T + + G
Sbjct: 200 KVLFEEMPYRDVVL-WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD 258
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G V S F G D+ V +++ +
Sbjct: 259 ---DSDAGQVKS--FANGNDAS---------------------------SVSEIIFRNKG 286
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
++ ++ S LK F M ++ + VT + +++ + ++ G+ +H A+ GL
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L + + +L+ MY K A VF+ M E++L SW +I+G+A NG A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 294 MIQTGLKPDSISFSAILSACSHL 316
+++ GLKPD + +++L A S L
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSL 429
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS-CSIESIK----LFDEMLKTGLRPDNFT 103
SL + R +F+ +P L ++N+++ AYA++S C +E+I+ LF + + + T
Sbjct: 89 SLTYARRVFDKMP-DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
++K C + S H K+GLD D+++ L+ +Y ++ K +FEEMP
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
RDVV W+ M+ ++ +A+ + + +PN +TL
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 229/386 (59%), Gaps = 12/386 (3%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG-SVH 124
+F +L+ Y+ ES+++FDEM P+ + + G L+ +G S
Sbjct: 115 VFVQTSLVDFYSSMGRIEESVRVFDEM------PERDVFAWTTMVSG---LVRVGDMSSA 165
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+F + D + NTL+ YA +E+DVA+ +F +MP RD++SW++MI +
Sbjct: 166 GRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFR 225
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL VF+ M SP+ VT+ +++SAC L + G+ IH Y + +G LDV +G+AL+
Sbjct: 226 EALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALI 285
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY+KCG ++++ +F +REKNL W +I GLA +G A+++F KM + +KP+ +
Sbjct: 286 DMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGV 345
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F ++LSAC+H GL++EG+ F M R ++I P +EHYGCMVD+L +AGL+EEA +IR
Sbjct: 346 TFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRT 405
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
M EPNAVI + L C+ H + KL++ LEP Y L ++++ W
Sbjct: 406 MKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMV-LEPGNSGYYTLLVNMNAEVNRWGE 464
Query: 425 AAELMVAINQKGLNK-VPGCSWVKVN 449
AA++ + + ++G+ K PG SW+++
Sbjct: 465 AAKIRLTMKEQGVEKRCPGSSWIEME 490
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 190/403 (47%), Gaps = 80/403 (19%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT----PPLFAYNTLIRAYA 77
++ + +KT+ + + ++++FI ++LS F R + L T P +F YN +I+ +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFI-SALST---FNRMDYAVLAYTQMEIPNVFVYNAMIKGFV 56
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
++ +++++L+ +ML+ + P ++T+P ++KACG + +VH +++ G DS +
Sbjct: 57 QSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVF 116
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ +L+ Y++ I+ + VF+EMP RDV +W++M++G V S A ++F M
Sbjct: 117 VQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP--- 173
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ ++A L++ Y++ V+ A
Sbjct: 174 ------------------------------------DRNLATWNTLIDGYARLREVDVAE 197
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+FN M +++ SWT MI+ + N R A+ +F +M + G+ PD ++ + ++SAC+HLG
Sbjct: 198 LLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLG 257
Query: 318 LVDEGKN-YFDEMARVYNI-----------------------------KPTMEHYGCMVD 347
+D GK ++ M +N+ + + + +++
Sbjct: 258 ALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIE 317
Query: 348 MLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQV 387
L G EEA + M E PN V S L AC + G +
Sbjct: 318 GLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLI 360
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 17/277 (6%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+++++ K + D Y+ N + + +D A + +M + +V +++MI GFV
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
P AL+++ +M AN SP S T SL+ AC + +R E++H + NG + V + T+
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTS 120
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+ YS G +E++ +VF+ M E+++ +WT M+SGL G + A LF M L
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLA-- 178
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+++ ++ + L VD + F++M I T M++ + EA +
Sbjct: 179 --TWNTLIDGYARLREVDVAELLFNQMPARDIISWT-----TMINCYSQNKRFREALGVF 231
Query: 363 RNMPTE---PNAVILRSFLGACRNHGQVLYLDDNLGK 396
M P+ V + + + AC + G + +LGK
Sbjct: 232 NEMAKHGISPDEVTMATVISACAHLGAL-----DLGK 263
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 236/400 (59%), Gaps = 5/400 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKAC 111
+ +F+ +F +N LI YA+ ++S +F EM++ +RP+ T ++ AC
Sbjct: 159 AQQVFDEFDAKDVVF-WNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVAC 217
Query: 112 GRCLLIGIGGSVHSLIFK-VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
+ +G ++H + K + L + L+ +Y C +D A+ +F+E+P ++ V W
Sbjct: 218 IESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVW 277
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+S+I G+ S ++ +++ M L+N P+ T+ ++SAC + G +H +A
Sbjct: 278 NSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEK 337
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
G+ DV +GTAL++MY+KCG + A KVF+ M E+N+ +W ++SG A +G+ AI L
Sbjct: 338 KGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIEL 396
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F++M ++G +PDSI+F A+L AC+H GLV+ GK YFD M + Y I P +EHYGCMVD+LG
Sbjct: 397 FSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLG 456
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAGL++EA +I+ M EPN V+ + L AC HG + + + ++KL G +YV
Sbjct: 457 RAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNI-EIGEWAAHHMIKLNAMDGGSYV 515
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ A++ + + ++ + + +KG+ K GCS +++ D
Sbjct: 516 ILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGD 555
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 195/389 (50%), Gaps = 12/389 (3%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLS-ISLHFTRSLFNNLPV 62
+ + LI+ + L Q+H + +SL + II++ I + LS L + +FN
Sbjct: 7 KSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQ- 65
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGG 121
P F YN +IRAY+ + +I ++++M + D +TYPFV KAC + G
Sbjct: 66 EPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGK 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH +I ++G + D ++ ++LL Y C EI A+ VF+E +DVV W+++I G+
Sbjct: 126 EVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQG 185
Query: 182 SPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
D+ VF M E PN T++ L+ AC N++ G +IH Y + + L V L
Sbjct: 186 MVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKL 245
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL+ +Y KCG+++ A K+F+ + EKN W +I G G N I L +M + L
Sbjct: 246 EAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNL 305
Query: 300 KPDSISFSAILSACSHLGLVDEGK--NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
KPD + S +LSAC+ +G + G + F E ++++ ++DM + G I
Sbjct: 306 KPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGT----ALIDMYAKCGFIGA 361
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
A + M E N + L +HGQ
Sbjct: 362 ARKVFDQM-NERNVATWNAILSGYASHGQ 389
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 244/456 (53%), Gaps = 34/456 (7%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L + H +K + N + + + + + + F R LF+ +P + ++N +I Y
Sbjct: 182 LGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP-QRDVVSWNAMIAGYV 240
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC----------------------- 114
+ +++KLF E+ K D T+ ++ +C
Sbjct: 241 QNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNT 296
Query: 115 LLIGI--GGSVHSL--IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
++ G GSV +F++ + + N ++ +A +++ A +F+ MP +VVSW
Sbjct: 297 MIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSW 356
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
++MIAG+ +ALK+F +M++ + PN+ T ++ AC +L + G H +
Sbjct: 357 NAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR 416
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
+G + DV +G LV MY+KCG +E A KVF+ MR+++ S + MI G A NG ++ L
Sbjct: 417 SGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLEL 476
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F +M TGLKPD ++F +LSAC H GLVDEG+ YFD M R Y+I P MEHYGCM+D+LG
Sbjct: 477 FEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLG 536
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG +EA +I MP +P+A + S L ACR H + L + + + L+ L P+ A YV
Sbjct: 537 RAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNI-DLGEKVAQHLIALNPQNPAPYV 595
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
L +++ + +G WD + + + + K GCSW+
Sbjct: 596 LLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 196/389 (50%), Gaps = 31/389 (7%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H H + T F + ++S ++ SL R +F+ +PV + ++ +I AYA
Sbjct: 87 HAHMIQTQFECQDISLGNKLVSIYVKLG---SLVEARRVFDEMPVKN-VVSWTAMIAAYA 142
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ E++ F EM G++P++FT+ ++ AC ++G H I K G +S+ +
Sbjct: 143 RHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVF 199
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+GN L+ MYA I+ A+ +F++MP RDVVSW++MIAG+V DALK+F + +
Sbjct: 200 VGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRD 259
Query: 198 ---------------ESPNSVTLV------SLVSACTSLIN-VRAGESIHSYAVVNGL-E 234
+ N+V L +LVS T + V+ G ++ + + E
Sbjct: 260 VITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPE 319
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+V A++ +++ G VE+A K+F M E N+ SW MI+G + NG+ A+ LF +M
Sbjct: 320 RNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQM 379
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+KP++ +F+ +L AC+ L ++++G + + R + + +V M + G
Sbjct: 380 QMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR-SGFQSDVLVGNTLVGMYAKCGS 438
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRN 383
IE+A + M + +A + +G N
Sbjct: 439 IEDARKVFDRMRQQDSASLSAMIVGYAIN 467
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL-DVALGTAL 243
+AL + M P+S T SL+ C + ++ + +H++ + E D++LG L
Sbjct: 47 EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V +Y K G + +A +VF+ M KN+ SWT MI+ A + G A+ F +M G++P+
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+F++IL AC+ L ++ E + DE+ + + + +VDM + G IE A +
Sbjct: 167 FTFASILPACTDLEVLGE---FHDEIVK-GGFESNVFVGNGLVDMYAKRGCIEFARELFD 222
Query: 364 NMP 366
MP
Sbjct: 223 KMP 225
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 224/414 (54%), Gaps = 32/414 (7%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N+LI +++ LF++M ++ + D F P ++ C G +H
Sbjct: 346 SWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYT 405
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF---------- 177
K G+ S +GN ++ MYA C + D A VF MP+R+ +SW++MI F
Sbjct: 406 IKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKAR 465
Query: 178 ---------------------VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI 216
V + LK++ M+ P+ +T + + AC L
Sbjct: 466 GYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLA 525
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
V+ G + ++A GL L+V++ ++V MYS+CG +++A F+ + +K+L SW M++
Sbjct: 526 IVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLA 585
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
A NG G I F M++T KP+ IS+ ++LS CSH+GLV EGK+YFD M RV+ I
Sbjct: 586 AFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGIS 645
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
PT EH+ CMVD+LGRAGL+E+A +I MP +PNA + + LG+CR H L L + K
Sbjct: 646 PTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHD-LRLAETAAK 704
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
L++L+ E YVL +++ S SG D A++ + KG+ GCSW++V++
Sbjct: 705 KLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDN 758
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 39/397 (9%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+FN +P + ++NTLI +++ ++ + +F EM G P+ TY V+ AC
Sbjct: 233 QIFNRMPERDEV-SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +H+ I ++ D GN L+ MYA C +D+AK VF+ + D +SW+S+I
Sbjct: 292 SDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLI 351
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G V DAL +F++M+ ++ + L +++ C+ GE +H Y + +G+
Sbjct: 352 TGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMG 411
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG-----RGNY--- 286
+G A++ MY+KCG +KA VF LM +N SWT MI+ + +G RG +
Sbjct: 412 SSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMM 471
Query: 287 -----------------------AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+ L+ M G++PD I+F+ + AC+ L +V G
Sbjct: 472 PERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGM 531
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
+ + + + +V M R GLI+EA + ++ + + + + L A
Sbjct: 532 QVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAAFAQ 589
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+G + + D + L+ E N++ + VS LSG
Sbjct: 590 NGLGIKVIDTFEDM---LKTECKPNHI--SYVSVLSG 621
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 163/351 (46%), Gaps = 45/351 (12%)
Query: 56 LFNNLPV-TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT----GLRPDNFTYPFVVKA 110
LF+ +PV ++ T+I Y++ S + F M++ G D F++ V+KA
Sbjct: 96 LFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKA 155
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
CG + +H+L+ K+G + I N+++ MY C ++D+A+ VF ++ + W
Sbjct: 156 CGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCW 215
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANE-------------------------------S 199
+SMI G+ P AL++F+RM +E S
Sbjct: 216 NSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFS 275
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN +T S++SAC S +++ G +H+ + LD+ G L++MY+KCG ++ A +V
Sbjct: 276 PNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRV 335
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F +RE + SW +I+G+ G G A+ LF +M ++ + D IL CS
Sbjct: 336 FKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYA 395
Query: 320 DEGKNYFDEMARVYNIKPTMEHYG----CMVDMLGRAGLIEEAYHIIRNMP 366
G E+ Y IK M ++ M + G ++A + R MP
Sbjct: 396 STG-----ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMP 441
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR--DVVSWSSMIAGFVACDSPS 184
+F+ + + NT++R + + A+ +F+EMPVR D VSW++MI+G+ S
Sbjct: 65 VFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHS 124
Query: 185 DALKVFHRM----KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ + F M ++ + + S++ AC SL + R +H+ G ++ +
Sbjct: 125 RSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQ 184
Query: 241 TALVEMYSKCGHVE-------------------------------KAFKVFNLMREKNLQ 269
++V MY KCG V+ KA ++FN M E++
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW +IS + +G G +++F +M G P+ +++ ++LSAC+ + G + +
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 330 ARVYNIKPTMEH-----YG-CMVDMLGRAGLIEEAYHIIRNM 365
R MEH +G ++DM + G ++ A + +++
Sbjct: 305 LR-------MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL 339
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R F+ +P + +N+++ Y + S E +KL+ M G++PD T+ ++AC
Sbjct: 465 RGYFDMMP-ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACAD 523
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
++ +G V + K GL + + N+++ MY+ C I AK F+ + +D++SW++M
Sbjct: 524 LAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAM 583
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNG 232
+A F + F M PN ++ VS++S C+ + V G+ S V G
Sbjct: 584 LAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFG 643
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMI 275
+ + +V++ + G +E+A + M K N W+ ++
Sbjct: 644 ISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+H+ +++GL+ + L L+ MYS CG AF+VF +N+ +W MI L + R
Sbjct: 30 LHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSR 89
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
+ A LF +M +K DS+S++ ++S S G F M R N
Sbjct: 90 MSDAEKLFDEM-PVRVK-DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTN 138
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 222/392 (56%), Gaps = 1/392 (0%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
NL + Y +I Y + +++++F +L+ + P+ T+ ++ AC I
Sbjct: 271 NLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIK 330
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G +H I K L+ +G+ ++ MYA C +D+A +F + ++D + W+S+I F
Sbjct: 331 LGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFS 390
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
P +A+ +F +M + + VT+ + +SAC ++ + G+ IH + + E D+
Sbjct: 391 QDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLF 450
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+AL+ MY+KCG + A VFNLM+EKN +W +I+ +G +++LF M++ G
Sbjct: 451 DMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG 510
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++PD I+F ILS+C H G V++G YF M Y I MEHY CM D+ GRAG ++EA
Sbjct: 511 IQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEA 570
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+ +I +MP P A + + LGACR HG V L + + LL LEP+ Y+L V +
Sbjct: 571 FEVITSMPFPPAASVWGTLLGACRVHGNV-ELAEVASRYLLDLEPKNSGYYLLLTHVLAD 629
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+G W + ++ + ++G+ KVPGCSW++VN+
Sbjct: 630 AGKWRSVHKIQHLMKERGVQKVPGCSWIEVNN 661
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 202/407 (49%), Gaps = 7/407 (1%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
V + QLH L +++ LD + + + + S L R LF+ +P L +N +I
Sbjct: 127 VEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQID-LVVWNRMIG 185
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + ++ LF+EM+ G++PD+ T+ + + + +H I + G+
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D Y+ + L+ +Y C++ +A +F D+V +++MI+G+V DAL++F +
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
PN++T S++ AC L ++ G +H Y + N LE +G+A++ MY+KCG ++
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A +F + K+ W +I+ + +G+ AI LF +M G+K D ++ SA LSAC+
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
++ + GK M + + + +++M + G + A ++ N+ E N V
Sbjct: 426 NIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAW 483
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
S + A HG YL D+L LE + +++ ++ S G+
Sbjct: 484 NSIIAAYGYHG---YLADSLALFHNMLEEGIQPDHITFLTILSSCGH 527
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 194/382 (50%), Gaps = 15/382 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+ + L+ D + + S I L + + + R F+ + + +N +I Y +
Sbjct: 32 IQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM-IDKDCVLWNVMINGYVQCG 90
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
S +IKLF +M+ + +PD+ T+ V+ ++ G +H L+ + GLD +GN
Sbjct: 91 ESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGN 150
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
TL+ +Y+ +++ A+ +F+ MP D+V W+ MI G+V DA +F+ M A P
Sbjct: 151 TLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKP 210
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+S+T S + + +++ + IH Y V +G+ LDV L +AL+++Y KC A K+F
Sbjct: 211 DSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMF 270
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
NL + ++ +T MISG NG A+ +F ++Q + P++++FS+IL AC+ L +
Sbjct: 271 NLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIK 330
Query: 321 EGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
G+ Y IK +E +++M + G ++ A H+I + +A+ S
Sbjct: 331 LGRELHG-----YIIKNELEEKCPVGSAIMNMYAKCGRLDLA-HLIFGRISIKDAICWNS 384
Query: 377 FLGACRNHG---QVLYLDDNLG 395
+ + G + +YL +G
Sbjct: 385 IITSFSQDGKPEEAIYLFRQMG 406
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 124/221 (56%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML G+ PD +T+P V+K C + +G + +I ++G D D ++ ++L+++YA
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I+ A+ F++M +D V W+ MI G+V C A+K+F M + P+SVT ++S
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
S V G +H V +GL+ +G LV +YSK + A K+F++M + +L W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
MI G NG + A LF +MI G+KPDSI+F++ L +
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPS 221
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 225/410 (54%), Gaps = 17/410 (4%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF LP ++NT+I + C +++L +M+ G + T+ +
Sbjct: 476 LFRQLPGKDAA-SWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLS 534
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP------------ 163
++G+G +H+ + KVG+ D ++ N+L+ MY C E++ A +F+ +P
Sbjct: 535 VLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESC 594
Query: 164 ---VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRA 220
V + VSWSSM++G+V DALK F M + + TL S+VSAC S +
Sbjct: 595 DDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLEL 654
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G +H Y G LDV LG+++++MY KCG + A+ +FN +++N+ WT MISG A
Sbjct: 655 GRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCAL 714
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G+G A+ LF MI G+ P+ +SF +L+ACSH GL++EG YF M VY I+P E
Sbjct: 715 HGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAE 774
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
H+ CMVD+ GRAG + E I N + + RSFL +CR H + + + K LL+
Sbjct: 775 HFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNI-EMGIWVCKKLLE 833
Query: 401 LEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
LEP Y+L +S+ + W+ AA++ + Q+G+ K P SW+++ +
Sbjct: 834 LEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKN 883
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 192/413 (46%), Gaps = 58/413 (14%)
Query: 27 LKTSLDHNTCIISR----FILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCS 82
L L N C+ R L + S +L +F +P T +F++ LI +A+ S
Sbjct: 310 LHAKLIKNGCVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTD-VFSWTVLISGFARIGLS 368
Query: 83 IESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG-IGGSVHSLIFKVGLDSDKYIGNT 141
+ + LF +M G+ P+ FT V+K+C + IG +H I + GLD D + N+
Sbjct: 369 ADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNS 428
Query: 142 LLRMYAACKEI-----------------------------DVAKAV--FEEMPVRDVVSW 170
+L Y C+ D+ K+V F ++P +D SW
Sbjct: 429 ILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASW 488
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
++MI G + AL++ ++M A + N +T + +SL + G+ IH+ +
Sbjct: 489 NTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLK 548
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQ--------------SWTIMI 275
G+ D + +L++MY KCG +EKA +F +L +E ++ SW+ M+
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
SG NGR A+ F+ MI + ++ D + ++++SAC+ G+++ G+ + I
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH---GYIQKI 665
Query: 336 KPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
++ + ++DM + G + +A+ +I N + N V+ S + C HGQ
Sbjct: 666 GHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQ 717
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 216 INVRAGESIHSYAVVNGLELDVAL-GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+N E +H+ + NG V + G L+ +Y+K ++E+A K+F + + ++ SWT++
Sbjct: 302 MNYPNSEVLHAKLIKNGC---VGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVL 358
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
ISG A G + LF KM G+ P+ + S +L +CS
Sbjct: 359 ISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 239/431 (55%), Gaps = 41/431 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+++ L ++N++I Y+K S E++ +F EM + GL PD FT ++ +
Sbjct: 189 RRVFDDIS-ERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTK 247
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+G VH + G++ D + N L+ MYA C + AK+VF++M +DVVSW+ M
Sbjct: 248 HGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCM 307
Query: 174 IA-----GFVAC------DSP--------------------SDALKVFHRMKLANESPNS 202
I G + C P ++A+ +F+RM + N
Sbjct: 308 INAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMAND 367
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
TLV+++S+C+ + ++ G+ HSY N + L L A+++MY+KCG ++ A VF
Sbjct: 368 TTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFG 427
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M EKN SW ++I LA +G G AI +F KM +G+ PD I+F+ +LSACSH GLVD G
Sbjct: 428 MPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTG 487
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
++YF+ M + I P +EHY CMVD+LGR GL+ EA +I+ MP +P+ V+ + LGACR
Sbjct: 488 QHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACR 547
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGAN----YVLAASVSSLSGNWDTAAELMVAINQKGLN 438
+G + +GK ++K ELG YVL +++ S S WD + ++Q G+
Sbjct: 548 TYGNL-----AIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIK 602
Query: 439 KVPGCSWVKVN 449
K S+++++
Sbjct: 603 KCRAISFIEID 613
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 207/416 (49%), Gaps = 43/416 (10%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTP 64
+ LI ++ L +H + L + + + +S+ + L + LF+ +P P
Sbjct: 39 LHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIP-QP 97
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
F +N LI+ Y+ +S I+S+ L+ M+ G+ P+ FT PFV+KAC +G VH
Sbjct: 98 NKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVH 157
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ FK+G+ S + N +L +Y AC I A+ VF+++ R +VSW+SMI G+
Sbjct: 158 AQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSE 217
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ +F M+ P+ TLV L+S T N G +H + VV G+E+D + AL+
Sbjct: 218 EAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALM 277
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG---------------------- 282
+MY+KCG+++ A VF+ M +K++ SWT MI+ A++G
Sbjct: 278 DMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNS 337
Query: 283 -------RGNY--AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN----YFDEM 329
G Y A+ LF +M +G+ + + AILS+CSH+G + GK FD
Sbjct: 338 IIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDN- 396
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
NI + ++DM + G ++ A + MP E NAV +GA HG
Sbjct: 397 ----NITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIGALALHG 447
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 260/463 (56%), Gaps = 23/463 (4%)
Query: 21 QLHTLFLKTS-LDHNTCIISRFI-LTSLSISLHFTRSLFNNLP-VTPPLFAYNTLIRAYA 77
++H + LK + L N+ + S + + + + + R +F+ +P + L +N +I YA
Sbjct: 303 EMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYA 362
Query: 78 KTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ E+++LF M + G P T V+ AC R ++H + K G+ ++
Sbjct: 363 QAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNR 422
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ N L+ MYA E+DVA+ +F + RDVVSW+++I G V ++A ++ M+L
Sbjct: 423 FVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLP 482
Query: 197 NES----------------PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ S PN++TL++L+ C +L G+ IH YAV + LE D+A+G
Sbjct: 483 SPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVG 542
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-L 299
+ALV+MY+KCG + + VF+ + +N+ +W ++I +G G+ A++LF +M G
Sbjct: 543 SALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEA 602
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
P+ ++F A L+ACSH GLVD G F M R + +KPT + + C+VD+LGRAG ++EAY
Sbjct: 603 TPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAY 662
Query: 360 HIIRNM-PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
II +M P E S LGACR H V L + + L +LEP ++YVL ++ S
Sbjct: 663 SIITSMEPGEQQVSAWSSLLGACRLHRNV-ELGEVAAERLFELEPGEASHYVLLCNIYSA 721
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+G WD + + V + ++G+ K PGCSW++++ M+ E++
Sbjct: 722 AGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESS 764
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 143/344 (41%), Gaps = 61/344 (17%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL--DSDKYIGNTLLRMYAAC--KEIDVA 155
D+F P +K+ S+H+ + L +GN LL YA C + +A
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 156 KAVFEEMPVRDVVSWSSMIAG---FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+RD VS++S+I+ F + DAL+ + +S TLVS++ AC
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDM--LAEGRHDVSSFTLVSVLLAC 179
Query: 213 TSLIN---VRAGESIHSYAVVNGLELDVALG----TALVEMYSKCGHVEKAFKVFNLMRE 265
+ L R G H++A+ G LD AL+ MY++ G V+ A +F
Sbjct: 180 SHLPGDDGRRLGREAHAFALKRGF-LDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAA 238
Query: 266 K------NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
++ +W MIS L GR A+ + M+ G++PD ++F++ L ACS L ++
Sbjct: 239 AFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEML 298
Query: 320 DEGK--------------NYFDEMA---------------RVYNIKP----TMEHYGCMV 346
G+ N F A RV+++ P + + M+
Sbjct: 299 ALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMI 358
Query: 347 DMLGRAGLIEEAYHIIRNMPTE----PNAVILRSFLGAC-RNHG 385
+AG+ EEA + M E P+ + L AC R+ G
Sbjct: 359 CGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEG 402
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 225/389 (57%), Gaps = 12/389 (3%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL- 126
A+ ++I Y ++ + + +LFD L P+ + + G I G V +
Sbjct: 267 AWTSMINGYILSADLVSARRLFD------LAPERDVVLWNIMVSG---YIEGGDMVEARK 317
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+F + D NT+L+ YA ++ + +FEEMP R++ SW+++I G+ +
Sbjct: 318 LFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 377
Query: 187 LKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L F RM ++ PN TLV+++SAC L + G+ +H YA +GL+ +V +G AL++
Sbjct: 378 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 437
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG +E A VF M K+L SW +I GLA + RG A++LF +M G KPD I+
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 497
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F IL AC+H+GLV++G YF MA Y I P +EHYGCMVDML RAG +E+A +R M
Sbjct: 498 FIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKM 557
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P E + VI LGACR + V + L + L++LEP+ ANYV+ +++ +G W+
Sbjct: 558 PVEADGVIWAGLLGACRIYKNVELAELALQR-LIELEPKNPANYVMLSNIYGDAGRWEDV 616
Query: 426 AELMVAINQKGLNKVPGCSWVKVNDGSAE 454
A L VA+ G K+PGCS ++VND E
Sbjct: 617 ARLKVAMRDTGFKKLPGCSLIEVNDAVVE 645
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 180/358 (50%), Gaps = 14/358 (3%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTL 72
KT +HQ+ + +N I + + ++ + + R LF+ +P P + +N++
Sbjct: 112 KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP-DPNIALWNSM 170
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
R YA++ E + LF +M +RP+ FT+P V+K+CG+ + G VH + K G
Sbjct: 171 FRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGF 230
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ ++G TL+ MY+A + A +F EM R+VV+W+SMI G++ A ++F
Sbjct: 231 RGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF-- 288
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMYSKCG 251
LA E V L +++ + + G+ + + + + DV +++ Y+ G
Sbjct: 289 -DLAPE--RDVVLWNIMVSGY----IEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNG 341
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAIL 310
+VE +F M E+N+ SW +I G A NG + F +M+ ++ + P+ + +L
Sbjct: 342 NVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVL 401
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
SAC+ LG +D GK + A +K + ++DM + G+IE A + R M T+
Sbjct: 402 SACARLGALDLGK-WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK 458
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
T L ++NTLI A S +++ LF +M G +PD T+ ++ AC L+ G +
Sbjct: 457 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFA 516
Query: 123 VHSLIFKVGLDSDKYI-------GNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMI 174
+ +D Y+ ++ M A ++ A A +MPV D V W+ ++
Sbjct: 517 YFQSM------ADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLL 570
Query: 175 A 175
Sbjct: 571 G 571
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 233/437 (53%), Gaps = 13/437 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K D + + + + + L R +F+ +P L +N LI +
Sbjct: 327 QIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNALISGCSHD 385
Query: 80 SCSIESIKLFDEMLKTGLRPD--NFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E + LF M K GL D T V+K+ I VH+L K+GL SD +
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSH 445
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N L+ Y C ++D A VF+E D++S ++M+ CD DA+K+F +M
Sbjct: 446 VINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+S L SL++ACTSL G+ +H++ + DV G ALV Y+KCG +E A
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
F+ + E+ + SW+ MI GLA +G G A+ LF +M+ G+ P+ I+ +++LSAC+H G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LVD+ K YF+ M + I T EHY CM+D+LGRAG +E+A ++ NMP + NA + +
Sbjct: 626 LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGAL 685
Query: 378 LGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
LGA R H D LG++ L LEPE +VL A+ + +G WD A++ +
Sbjct: 686 LGASRVH-----RDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMK 740
Query: 434 QKGLNKVPGCSWVKVND 450
+ K P SWV++ D
Sbjct: 741 DSNVKKEPAMSWVEIKD 757
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 189/394 (47%), Gaps = 24/394 (6%)
Query: 21 QLHTLFLKTSL-----DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
LH+ LK+ L +H + SR L S + R++F+ +P P ++++L+ A
Sbjct: 25 HLHSHLLKSGLLAGFSNHLLTLYSRCRLPSAA------RAVFDEIP-DPCHVSWSSLVTA 77
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
Y+ +++ F M G+ + F P V+K + G VH+L L D
Sbjct: 78 YSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHD 134
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEM----PVRDVVSWSSMIAGFVACDSPSDALKVFH 191
++ N L+ +Y +D A+ +F+E R+ VSW++MI+ +V D DA+ VF
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M + E PN +V+ACT ++ AG +H V G E DV ALV+MYSK G
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLG 254
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+E A VF M ++ SW ISG +G + A+ L +M +GL P+ + S++L
Sbjct: 255 DIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLK 314
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC+ G + G+ M + G +VDM + G +++A + MP +
Sbjct: 315 ACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFMPRR-DL 372
Query: 372 VILRSFLGACRN---HGQVLYLDDNLGKLLLKLE 402
++ + + C + HG+VL L + K L L+
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406
>gi|356547105|ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 477
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 254/469 (54%), Gaps = 34/469 (7%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTC---IISRFILTS---LSISLHFTRSLF 57
R I L L K +++ Q+H + L T +I + + ++ + H F
Sbjct: 9 RCISFLYSLPKLSYNIKQIHAQLITNGLKSPTFWAKLIEHYCGSPDQHIASNAHLVFQYF 68
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKACGR--- 113
+ P LF +NTLIR C I +F GL D +TY FV+ AC R
Sbjct: 69 DK----PDLFLFNTLIRCVQPNDC----ILIFQNEFSRGLMYFDEYTYNFVLGACARSPS 120
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ +G +H+ I K G +S+ + T + YA+ K+I A+ VF+EMP R V+W++M
Sbjct: 121 ASTLWVGRQLHARIVKHGFESNILVPTTKIYFYASNKDIISARRVFDEMPRRSTVTWNAM 180
Query: 174 IAGFVACDSPS-----DALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
I G+ + + +AL +F M ++ P T+VS++SA + + + G IH
Sbjct: 181 ITGYSSQKEGNKKYALNALSLFIDMLVDVSVIKPTGTTIVSVLSAVSQIGMLETGACIHG 240
Query: 227 YA--VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+A V E DV +GT LV+MYSKCG ++ A VF M +KN+ +WT M + LA +G+G
Sbjct: 241 FAEKTVCTPEDDVFIGTGLVDMYSKCGCLDSALSVFWRMNQKNILTWTAMTTSLAIHGKG 300
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ + KM G+KP+ +F++ LSAC H GLV+EG F EM R + + P ++HYGC
Sbjct: 301 KQALEVLYKMGAYGVKPNEATFTSFLSACCHGGLVEEGLILFHEMKRTFGMMPQIKHYGC 360
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
+VD+LGRAG +EEAY I MP P+AVI RS LGAC+ HG V+ + + +GK LL+LE
Sbjct: 361 IVDLLGRAGNLEEAYDFIMRMPINPDAVIWRSLLGACKIHGDVV-MGEKVGKFLLQLEEW 419
Query: 405 LGA------NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
A +Y+ ++V +L+ WD + + KG+ G S V+
Sbjct: 420 SSAESPKSEDYIALSNVYALAEKWDDVEIVRKTMKSKGILSKAGSSAVQ 468
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 231/396 (58%), Gaps = 2/396 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++ T+I YA+ +E+I LF ++ G+ D V++AC +H
Sbjct: 415 LISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+FK L +D + N ++ +Y ID A+ FE + +D+VSW+SMI V P +
Sbjct: 475 YVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVE 533
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++F+ +K N P+S+ ++S +SA +L +++ G+ IH + + G L+ + ++LV+
Sbjct: 534 ALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVD 593
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+ CG VE + K+F+ +++++L WT MI+ +G GN AI+LF KM + PD I+
Sbjct: 594 MYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHIT 653
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F A+L ACSH GL+ EGK +F+ M Y ++P EHY CMVD+L R+ +EEAYH +RNM
Sbjct: 654 FLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNM 713
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P +P++ I + LGAC H L + K LL+ + E Y L +++ + G W+
Sbjct: 714 PIKPSSEIWCALLGACHIHSNK-ELGELAAKELLQSDTENSGKYALISNIFAADGRWNDV 772
Query: 426 AELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
E+ + + GL K PGCSW++V++ M+++ +
Sbjct: 773 EEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKS 808
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 54 RSLFNNLPVTPP-LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R LF+ + + ++N++I A+ +E++ LF M + G+ + +T+ ++
Sbjct: 200 RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVE 259
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +G +H + K +D Y+ N L+ MYA C ++ A VFE M RD VSW++
Sbjct: 260 DPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNT 319
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+++G V + SDAL F M+ + + P+ V++++L++A N+ G+ +H+YA+ NG
Sbjct: 320 LLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG 379
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
L+ ++ +G LV+MY+KC V+ F M EK+L SWT +I+G A N AI+LF
Sbjct: 380 LDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFR 439
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
K+ G+ D + ++L ACS L + +N+ E+
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSGL----KSRNFIREI 472
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 173/356 (48%), Gaps = 24/356 (6%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI------SLHFTRSLFNNLPVTPPL 66
+K + QLH L LK+ L S F+ T L + SL +F+ + +
Sbjct: 59 AKALPQGQQLHALLLKSHL-------SAFLATKLVLMYGKCGSLRDAVKVFDEMS-ERTI 110
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F++N L+ A+ + +E+I+L+ +M G+ D T+P V+KACG +G +H +
Sbjct: 111 FSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE--MPVRDVVSWSSMIAGFVACDSPS 184
K G ++ N L+ MY C ++ A+ +F+ M D VSW+S+I+ VA +
Sbjct: 171 AVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCL 230
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL +F RM+ + N+ T V+ + V+ G IH + + DV + AL+
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALI 290
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG +E A +VF M ++ SW ++SGL N + A++ F M +G KPD +
Sbjct: 291 AMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQV 350
Query: 305 SFSAILSACSHLGLVDEGK--------NYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
S +++A G + +GK N D ++ N M C V +G A
Sbjct: 351 SVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 244/432 (56%), Gaps = 4/432 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +LK + + + S + + L R +F + L A+N++IR Y
Sbjct: 228 EIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMR-RKSLVAWNSMIRGYVAR 286
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S ++L + M+ G RP T ++ AC R + G VH + + +D+D YI
Sbjct: 287 GDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYIN 346
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+L+ +Y C E+ +A+ VF + V SW+ MI+G+V+ + A+ V+ +M
Sbjct: 347 CSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQ 406
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ VT S++S C+ L + G+ IH + LE D L +AL++MYSKCG+V++A ++
Sbjct: 407 PDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRI 466
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN + +K++ SWT+MIS +G+ A+ F +M + G+KPD ++F A+LSAC H GL+
Sbjct: 467 FNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLI 526
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP-TEPNAVILRSFL 378
DEG YF +M Y I+ ++E Y C++D+LGRAG + EAY I++ P T NA +L +
Sbjct: 527 DEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLF 586
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
AC H L L + KLL++ P+ + Y + ++ + +WD A + + + + G+
Sbjct: 587 CACCLHRDHL-LGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMR 645
Query: 439 KVPGCSWVKVND 450
K PGCSW+++N+
Sbjct: 646 KKPGCSWIEMNE 657
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 192/349 (55%), Gaps = 6/349 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+F+ +P + ++NT+I ++ + + ++++LF M ++ P++ + + AC R
Sbjct: 162 QVFDEMP-ERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRL 220
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L + G +H K + D+Y+ + L+ MY C +++A+ VF++M + +V+W+SMI
Sbjct: 221 LCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMI 280
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+VA +++ +RM + P+ TL S++ AC+ N+ G+ +H Y + + ++
Sbjct: 281 RGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVD 340
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D+ + +L+++Y KCG V+ A VF ++ ++SW +MISG G A+ ++ +M
Sbjct: 341 ADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQM 400
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G++PD ++F+++LS CS L +++GK ++ ++ ++DM + G
Sbjct: 401 VSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGN 459
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ---VLYLDDNLGKLLLK 400
++EA I ++P + + V + A +HGQ LY D + K +K
Sbjct: 460 VKEASRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVK 507
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 164/305 (53%), Gaps = 2/305 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNT 71
+K++ +H L L + + I + H + R +F N+ + ++ +N+
Sbjct: 16 TKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRSDVYIWNS 75
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y+K S +++K+F +L + PD+FTYP V+KA G +G +H+++ K
Sbjct: 76 LVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKS 135
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D + ++L+ MYA + + VF+EMP RDV SW+++I+ F AL++F
Sbjct: 136 GHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELF 195
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ ++ PNSV++ +SAC+ L+ + G+ IH + ELD + +ALV+MY +C
Sbjct: 196 GRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRC 255
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+E A +VF MR K+L +W MI G G + L +MI G +P + ++IL
Sbjct: 256 DFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSIL 315
Query: 311 SACSH 315
ACS
Sbjct: 316 MACSR 320
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
S L+SL+ CT+ ++R + +H + GL DV L +L+ +Y C A VF
Sbjct: 2 ESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVF 61
Query: 261 -NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KPDSISFSAILSACSHLGL 318
N+ ++ W ++SG + N + + +F +++ + PDS ++ ++ A L
Sbjct: 62 ENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGAL-- 119
Query: 319 VDEGKNYFDEMARVYNIKP----TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
G+ + M +K + +V M + L E++ + MP A
Sbjct: 120 ---GREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVA 173
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 238/441 (53%), Gaps = 45/441 (10%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
TV +++ + ++ T +I+ +IL++ +S R LF+ P + +N ++
Sbjct: 186 TVGDAYKIFCEMFERNVVAWTSMINGYILSADLVS---ARRLFDLAP-ERDVVLWNIMVS 241
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y + +E+ KLF EM +
Sbjct: 242 GYIEGGDMVEARKLFHEMP---------------------------------------NR 262
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM- 193
D NT+L+ YA ++ + +FEEMP R++ SW+++I G+ + L F RM
Sbjct: 263 DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRML 322
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
++ PN TLV+++SAC L + G+ +H YA +GL+ +V +G AL++MY+KCG +
Sbjct: 323 SESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGII 382
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
E A VF M K+L SW +I GLA + RG A++LF +M G KPD I+F IL AC
Sbjct: 383 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCAC 442
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
+H+GLV++G YF MA Y I P +EHYGCMVDML RAG +E+A +R MP E + VI
Sbjct: 443 THMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVI 502
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
LGACR + V + L + L++LEP+ ANYV+ +++ +G W+ A L VA+
Sbjct: 503 WAGLLGACRIYKNVELAELALQR-LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMR 561
Query: 434 QKGLNKVPGCSWVKVNDGSAE 454
G K+PGCS ++VND E
Sbjct: 562 DTGFKKLPGCSLIEVNDAVVE 582
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 187/371 (50%), Gaps = 14/371 (3%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNN 59
++ +L+Q KT +HQ+ + +N I + + ++ + + R LF+
Sbjct: 36 LLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQ 95
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + +N++ R YA++ E + LF +M +RP+ FT+P V+K+CG+ +
Sbjct: 96 IP-DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 154
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G VH + K G + ++G TL+ MY+A + A +F EM R+VV+W+SMI G++
Sbjct: 155 GEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVA 238
A ++F LA E V L +++ + + G+ + + + + + DV
Sbjct: 215 SADLVSARRLF---DLAPE--RDVVLWNIMVSGY----IEGGDMVEARKLFHEMPNRDVM 265
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QT 297
+++ Y+ G+VE +F M E+N+ SW +I G A NG + F +M+ ++
Sbjct: 266 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 325
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+ P+ + +LSAC+ LG +D GK + A +K + ++DM + G+IE
Sbjct: 326 DVPPNDATLVTVLSACARLGALDLGK-WVHVYAESSGLKGNVYVGNALMDMYAKCGIIEN 384
Query: 358 AYHIIRNMPTE 368
A + R M T+
Sbjct: 385 AISVFRGMDTK 395
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 195 LANESPNSV---TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
LA + P+ + +SL+ +C + V I + + NG + + + LV + +
Sbjct: 28 LAPKPPHRLLEERFISLLQSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLK 84
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A ++F+ + + N+ W M G A + + LF +M ++P+ +F +L
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRNMPT 367
+C + + EG E + IK ++DM G + +AY I M
Sbjct: 145 SCGKINALIEG-----EQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-F 198
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
E N V S + +G +L D + L L PE
Sbjct: 199 ERNVVAWTSMI-----NGYILSADLVSARRLFDLAPE 230
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 229/401 (57%), Gaps = 2/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ R +F+ + + L ++NT+I Y + E++ +F EM G + FT V+
Sbjct: 104 VELARQVFDGM-LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 162
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG +H L K +D + Y+G LL +YA C I A VFE M + V+
Sbjct: 163 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 222
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WSSM+AG+V + +AL ++ R + + N TL S++ AC++L + G+ +H+
Sbjct: 223 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 282
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G +V + ++ V+MY+KCG + +++ +F+ ++EKNL+ W +ISG A + R +
Sbjct: 283 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 342
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF KM Q G+ P+ ++FS++LS C H GLV+EG+ +F M Y + P + HY CMVD+L
Sbjct: 343 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 402
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GRAGL+ EAY +I+++P +P A I S L +CR + L L + + L +LEPE N+
Sbjct: 403 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN-LELAEVAAEKLFELEPENAGNH 461
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + + W+ A+ + + KV G SW+ + D
Sbjct: 462 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 502
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 15/333 (4%)
Query: 67 FAYNTLIRA-----YAKTSCSIESIKLFDEMLKTGLRPDNFTYPF--------VVKACGR 113
F N LIR + TS +I + + + P ++ F +++ C R
Sbjct: 6 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 65
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + H I ++ L+ D + N L+ Y+ C +++A+ VF+ M R +VSW++M
Sbjct: 66 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 125
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I + S+AL +F M+ + T+ S++SAC + + +H +V +
Sbjct: 126 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 185
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L++ +GTAL+++Y+KCG ++ A +VF M++K+ +W+ M++G N A+ L+ +
Sbjct: 186 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 245
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ L+ + + S+++ ACS+L + EGK + + + VDM + G
Sbjct: 246 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCG 304
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ E+Y II + E N + + + H +
Sbjct: 305 SLRESY-IIFSEVQEKNLELWNTIISGFAKHAR 336
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 226/399 (56%), Gaps = 10/399 (2%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF----DEMLKTGLRPDNFTYPFVVKAC 111
LF+ +P + ++ T+I Y + +E+ +LF +E G R T+ +++A
Sbjct: 189 LFDEMPARNAV-SWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPR----TFATMIRAS 243
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+I G +HS K GL D ++ L+ MY+ C ++ A VF+EMP + +V W+
Sbjct: 244 AGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWN 303
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
S+IAG+ +AL ++H M+ + + T ++ C+ L +V + +H+ V N
Sbjct: 304 SIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRN 363
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G LDV TALV+ YSK G V+ A VF+ M +N+ SW +I+G ++G G AI +F
Sbjct: 364 GFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMF 423
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
KM++ G+ P+ ++F A+LSACS GL + G F M R + +KP H+ CM+++LGR
Sbjct: 424 EKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGR 483
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
GL++EAY +IR P +P A + + L ACR HG L L + L +EPE +NY++
Sbjct: 484 EGLLDEAYALIRKAPFQPTANMWAALLRACRVHGN-LELGKFAAEKLYGMEPEKLSNYIV 542
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + SG AA++ + +KGL +P CSW++VN+
Sbjct: 543 LLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNN 581
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 6/354 (1%)
Query: 82 SIESIKLFDEMLKTGLRPDNFTYPFVVKAC-GRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++E ++F+ L+ G TY ++ AC G + G+ + ++ G + D+Y+ N
Sbjct: 115 ALEMFEIFE--LEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMV-DNGFEPDQYMRN 171
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+L M+ C + A +F+EMP R+ VSW ++I+G+V + +A ++F M+
Sbjct: 172 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 231
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
T +++ A L + G +HS A+ GL D+ + AL++MYSKCG +E A VF
Sbjct: 232 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 291
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ M +K + W +I+G A +G A+ L+ +M +G+K D +FS I+ CS L V
Sbjct: 292 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 351
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
K + R + +VD + G +++A H+ M N + + +
Sbjct: 352 RAKQVHASLVR-NGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCR-NIISWNALIAG 409
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
NHG D K+L + ++ S S+SG ++ E+ ++ +
Sbjct: 410 YGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTR 463
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 8/216 (3%)
Query: 160 EEMPVRDV------VSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSAC 212
+E P+++ V S I V C DAL++F +L + T +L++AC
Sbjct: 83 KETPLKETHVKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINAC 142
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
L ++R + + +Y V NG E D + ++ M+ KCG + A ++F+ M +N SW
Sbjct: 143 IGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWG 202
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+ISG D+G A LF M + +F+ ++ A + L ++ G+ A
Sbjct: 203 TIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQ-LHSCAIK 261
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + ++DM + G +E+A+ + MP +
Sbjct: 262 AGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDK 297
>gi|115479131|ref|NP_001063159.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|50251469|dbj|BAD28534.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50252346|dbj|BAD28379.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631392|dbj|BAF25073.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|215717103|dbj|BAG95466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736827|dbj|BAG95756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 503
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 239/458 (52%), Gaps = 10/458 (2%)
Query: 1 MISRHIETLIQL---SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLF 57
M + H+ LI + TV HL Q+H L + + + L SL
Sbjct: 1 MAALHLHALIAGGGGATTVPHLRQIHAHLLTSGRFPSLGPVLLRRLISLPNPHLHLAHRL 60
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL- 116
+P L +N L+ A + + LF + + GLRPD T P V+KA R
Sbjct: 61 LLSLPSPSLDLFNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPG 120
Query: 117 -IGIGGSVHSLIFKVGLDSDK-YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ + GSVHS K GL S Y+ N L+ Y+AC +++ A VF+EMP R VVSW++ +
Sbjct: 121 SLPVVGSVHSEAVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTAL 180
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+++F M A P+ T V ++SA L N+ G+ H V L+
Sbjct: 181 TACAGNGRHELCVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLD 240
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ + LGTA V MYSKC V A ++F M +N+ +WT MI G A NG A+ LF +M
Sbjct: 241 MTLQLGTAAVNMYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRM 300
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ + P+ ++F +L ACSH GLVDEG+ +F EM VY I P M HY MVD+LGR GL
Sbjct: 301 KLSKIIPNYVTFLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGL 360
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ---VLYLDDNLGKLLLKLEPELGANYVL 411
++EAY + MP E + V+ R+ L AC+ H + +D GK LL+LEP NYV+
Sbjct: 361 LQEAYDFVVGMPVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGK-LLELEPRRSGNYVM 419
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ G+WD AA+ + + G+ KV G S V+V
Sbjct: 420 VSNIYCEIGSWDEAAKARRVMREGGMKKVAGESCVEVG 457
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 246/436 (56%), Gaps = 9/436 (2%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSIS---LHFTRSLFNNLPVTPPLFAYNTLIRA 75
L +LH ++ L ++ ++ + LH R +F+ + + + ++N LI A
Sbjct: 290 LRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACR-VFDGI-CSKMVSSWNALIGA 347
Query: 76 YAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+A+ + +I+LF EM G +PD F+ ++ ACG + G + H I + GL+
Sbjct: 348 HAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEK 407
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM- 193
D +I +LL +Y C +A+ +F+ + +D VSW++MIAG+ P ++L++F M
Sbjct: 408 DSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQ 467
Query: 194 -KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
K P+ + S + AC+ L VR G+ +H +A+ L D L +++++MYSKCG
Sbjct: 468 SKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGS 527
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
V+ A F+ ++ K+ SWT+MI+G A NGRG A+ L+ KM + G++PD ++ +L A
Sbjct: 528 VDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMA 587
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
C H G++++G +F EM + I+ +EHY C++ ML RAG +A ++ MP EP+A
Sbjct: 588 CGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAK 647
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
IL S L AC HG+V L + LL+LEP +YVLA+++ + S WD ++ +
Sbjct: 648 ILSSVLSACHMHGEV-ELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKML 706
Query: 433 NQKGLNKVPGCSWVKV 448
G+ K PGCSW+ +
Sbjct: 707 RDAGVAKEPGCSWIDI 722
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 20/263 (7%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKT--GLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L +N L+ ++ +++ + +L G+ PD FT P +K+C G V
Sbjct: 30 LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQV 85
Query: 124 HSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H++ K+GL D D ++GN+L+ MY C +D A+ VFE M R++VSW++++A A
Sbjct: 86 HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMA---AVAD 142
Query: 183 PSDALKVFHRMKLAN----ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
P L++F R L + +P+ TLV+++ C +L G ++H AV +G +
Sbjct: 143 PRRGLELF-RDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201
Query: 239 LGTALVEMYSKCGHV---EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA--K 293
+ LV+MY+KCG + E AF +N+ SW +M+ G A NG A L +
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261
Query: 294 MIQTGLKPDSISFSAILSACSHL 316
M + G+ D I+ ++L CS L
Sbjct: 262 MEERGVPADEITMLSVLPVCSGL 284
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 7/265 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++N L+ A A +E + E L PD T V+ C G +VH
Sbjct: 130 LVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHG 189
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV---RDVVSWSSMIAGFVACDS 182
L K G D+ + N L+ MYA C E+ A+ F E P R+VVSW+ M+ G+
Sbjct: 190 LAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGE 249
Query: 183 PSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL- 239
A + M++ + +T++S++ C+ L + +H++ V GL L +
Sbjct: 250 AGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMV 309
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
AL+ Y +CG + A +VF+ + K + SW +I A NG + AI LF +M G
Sbjct: 310 PNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACG 369
Query: 299 LKPDSISFSAILSACSHLGLVDEGK 323
KPD S ++L AC +L + GK
Sbjct: 370 QKPDWFSIGSLLLACGNLKHLLHGK 394
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHS 226
W+ ++A +DAL + R+ A++ +P+ TL + +C G +H+
Sbjct: 32 QWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHA 87
Query: 227 YAVVNGL-ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
A GL + D +G +LV MY +CG V+ A KVF M +NL SW +++ +AD RG
Sbjct: 88 VAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRG- 146
Query: 286 YAISLFAKMIQT---GLKPDSISFSAILSACSHLGLVDEG--------KNYFDEMARVYN 334
+ LF ++ PD + +L C+ L + G K+ +D RV N
Sbjct: 147 --LELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEA 358
+ +VDM + G + +A
Sbjct: 205 V---------LVDMYAKCGEMADA 219
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 216/382 (56%), Gaps = 1/382 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ T++ + + +++ F M G+ D +T+ ++ ACG + G +H+ I
Sbjct: 240 WTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ D + ++G+ L+ MY+ C+ I A+ F M ++++SW+++I G+ +A++
Sbjct: 300 RTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
VF M+ P+ TL S++S+C +L ++ G H A+V+GL + + ALV +Y
Sbjct: 360 VFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M + SWT +++G A GR I LF KM+ +KPD ++F
Sbjct: 420 KCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIG 479
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACS G V++G +YF M + + I P +HY CM+D+ R+G ++EA I+ MP
Sbjct: 480 VLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMH 539
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A+ + L ACR G + + + LL+++P+ A+YVL S+ + GNW+ A+L
Sbjct: 540 PDAIGWGTLLSACRLRGD-MEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQL 598
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
+ + + K PGCSW+K +
Sbjct: 599 RRGMRDRQVKKEPGCSWIKYKN 620
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 34/331 (10%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+YN +I ++ +++L+ +L+ G +RP T +V A +G H
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164
Query: 126 LIFKVGLDSDKYIGNTLLRMYAA-------------------------------CKEIDV 154
I ++G + ++G+ L+ MYA CK ++
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +FE M RD ++W++M+ GF S AL F RM+ + + T S+++AC +
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ IH+Y + + +V +G+ALV+MYSKC ++ A F M KN+ SWT +
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTAL 344
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I G NG A+ +F++M + G+ PD + +++S+C++L ++EG F +A V
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSG 403
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ + +V + G+ G IE+A+ + M
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H ++T D N + S + + S S+ + F + + ++ LI Y +
Sbjct: 293 QIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN-IISWTALIVGYGQN 351
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
CS E++++F EM + G+ PD+FT V+ +C + G H L GL +
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ +Y C I+ A +F+EM D VSW++++ G+ + + +F +M +
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVK 471
Query: 200 PNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ VT + ++SAC+ V G S HS +G+ T ++++YS+ G +++A +
Sbjct: 472 PDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEE 531
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
Q + PD+I + +LSAC G
Sbjct: 532 FIK----------------------------------QMPMHPDAIGWGTLLSACRLRGD 557
Query: 319 VDEGK 323
++ G+
Sbjct: 558 MEIGQ 562
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 159/394 (40%), Gaps = 105/394 (26%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+ LP PP N L+ AY K + ++FD P+ FTY
Sbjct: 31 ILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATP----HPNLFTY----------- 75
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
N LL A + +D ++F M RD VS++++IA
Sbjct: 76 ------------------------NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIA 111
Query: 176 GFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
GF + + A++++H + A S P+ +T+ ++V A ++L + G H + G
Sbjct: 112 GFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGF 171
Query: 234 ELDVALGTALVEMYSK-------------------------------CGHVEKAFKVFNL 262
++ +G+ LV MY+K C VE+A ++F +
Sbjct: 172 GVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEV 231
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M +++ +WT M++G NG + A++ F +M G+ D +F +IL+AC L +++G
Sbjct: 232 MTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 323 K-------------NYF------DEMARVYNIKPT-----------MEHYGCMVDMLGRA 352
K N F D ++ +IKP + + ++ G+
Sbjct: 292 KQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQN 351
Query: 353 GLIEEAYHIIRNMPT---EPNAVILRSFLGACRN 383
G EEA + M +P+ L S + +C N
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 226/382 (59%), Gaps = 2/382 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +I Y I+S+++F ++K + P+ T ++ G L + +G +H I
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII 468
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D+ IG ++ MYA C +++A +FE + RD+VSW+SMI D+PS A+
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M ++ + V++ + +SAC +L + G++IH + + + L DV + L++MY+
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFS 307
KCG+++ A VF M+EKN+ SW +I+ ++G+ ++ LF +M++ +G++PD I+F
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
I+S+C H+G VDEG +F M Y I+P EHY C+VD+ GRAG + EAY +++MP
Sbjct: 649 EIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A + + LGACR H V L + L+ L+P YVL ++ + + W++ +
Sbjct: 709 PPDAGVWGTLLGACRLHKNV-ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTK 767
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + ++ + K+PG SW+++N
Sbjct: 768 VRSLMKEREVQKIPGYSWIEIN 789
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 172/319 (53%), Gaps = 2/319 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I Y ++ ES+ F EM+ +G+ PD T+ ++ + + + +H I
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + D ++ + L+ Y C+ + +A+ +F + DVV +++MI+G++ D+L+
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F + SPN +TLVS++ L+ ++ G +H + + G + +G A+++MY+
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + A+++F + ++++ SW MI+ A + + AI +F +M +G+ D +S SA
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
LSAC++L GK M + +++ + ++DM + G ++ A ++ + M E
Sbjct: 548 ALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KE 605
Query: 369 PNAVILRSFLGACRNHGQV 387
N V S + AC NHG++
Sbjct: 606 KNIVSWNSIIAACGNHGKL 624
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 2 ISRHIETLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLF 57
I R + L+Q + L Q +H + S+ ++ R + + ++ S +F
Sbjct: 34 IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 58 NNLPVT-PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
L + + +N++I ++ + +++ + +ML G+ PD T+P +VKAC
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ + +G+D ++++ ++L++ Y +IDV +F+ + +D V W+ M+ G
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+ C + +K F M++ SPN+VT ++S C S + + G +H VV+G++ +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
++ +L+ MYSKCG + A K+F +M + +W MISG +G +++ F +MI
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 297 TGLKPDSISFSAILSACSHL 316
+G+ PD+I+FS++L + S
Sbjct: 334 SGVLPDAITFSSLLPSVSKF 353
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 147/301 (48%), Gaps = 9/301 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ YAK IK F M + P+ T+ V+ C LLI +G +H L+
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G+D + I N+LL MY+ C D A +F M D V+W+ MI+G+V ++L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F+ M + P+++T SL+ + + N+ + IH Y + + + LD+ L +AL++ Y
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC V A +F+ ++ +T MISG NG ++ +F +++ + P+ I+ +
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTME---HYGC-MVDMLGRAGLIEEAYHIIRN 364
IL L + G+ + IK + + GC ++DM + G + AY I
Sbjct: 447 ILPVIGILLALKLGRELHG-----FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 365 M 365
+
Sbjct: 502 L 502
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 35/308 (11%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+++AC L+ G VH+ + + D Y +L MYA C +F + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 166 --DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ W+S+I+ FV + AL + +M SP+ T LV AC +L N + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+ G++ + + ++L++ Y + G ++ K+F+ + +K+ W +M++G A G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG------------------KN- 324
+ I F+ M + P++++F +LS C+ L+D G KN
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 325 ---------YFDEMARVYNI--KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PN 370
FD+ ++++ + + + CM+ ++GL+EE+ M + P+
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 371 AVILRSFL 378
A+ S L
Sbjct: 340 AITFSSLL 347
>gi|449521058|ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 376
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 212/337 (62%), Gaps = 4/337 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT-SCSIESIKLFDEMLKTGLR-PDNFTYPF 106
++++ RS+F +P P +F++N+LI+ Y++ + S E I LF ++ +TG P++FT F
Sbjct: 39 NINYARSVFAQIP-HPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+KAC G G VHS + K G S ++ +L+ Y C+EI A+ VFEEMPVR+
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+V+W++MI+G + +A+++F M+ A P+++TLVS+VSAC + G +H+
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHA 217
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
Y + D+ L TALV+MY+KCG +E+A +VF M K+ +W+ MI G A +G
Sbjct: 218 YIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQD 277
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
AI F +M++T + PD ++F A+LSAC+H GLV G+ ++ M + I+P++EHYGC V
Sbjct: 278 AIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHYGCKV 336
Query: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
D+L R+GL+EEAY I M PNA RS L C+
Sbjct: 337 DLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKK 373
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +K + + + I + S L R + L + ++ ++I Y +
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIAGYVQH 425
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ F EM G+ PDN AC + G +H+ ++ G +D I
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NTL+ +YA C + A ++F E+ +D ++W+ +I+GF AL VF +M A
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAK 545
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T +S +SA +L +++ G+ +H AV G + + AL+ +Y KCG +E A +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M +N SW +I+ + +GRG A+ LF +M Q GLKP+ ++F +L+ACSH+GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M+ VY + P +HY C+VD+LGRAG ++ A + MP NA+I R+ L
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + + + K LL+LEP A+YVL ++ +++G W ++ + +G+ K
Sbjct: 726 ACKVHKNI-EIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 785 EPGRSWIEVKN 795
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 191/371 (51%), Gaps = 8/371 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
QLH+ LK + + I+ L L + + +FN L + +N ++ AY
Sbjct: 266 QLHSYLLKAGMSFD--YITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYG 322
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S +S ++F +M TG+ P+ FTYP +++ C I +G +HSL K G +SD Y
Sbjct: 323 QISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMY 382
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ MY+ + +D A+ + E + RDVVSW+SMIAG+V D +AL F M+
Sbjct: 383 VSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG 442
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+++ L S SAC + +R G IH+ V+G D+++ LV +Y++CG E+AF
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F + K+ +W +ISG + A+ +F KM Q G K + +F + +SA ++L
Sbjct: 503 SLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLA 562
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+ +GK + + T E ++ + G+ G IE+A I M N V +
Sbjct: 563 DIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTI 620
Query: 378 LGACRNHGQVL 388
+ +C HG+ L
Sbjct: 621 ITSCSQHGRGL 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 15/355 (4%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NTLI +A+ ++++FDEM +GLRPD T ++ AC + G +HS +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G+ D +LL +Y C +I+ A +F +VV W+ M+ + + + +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M+ PN T ++ CT + GE IHS ++ NG E D+ + L++MYS
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K ++KA K+ ++ ++++ SWT MI+G + A++ F +M G+ PD+I ++
Sbjct: 393 KYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 309 ILSACSHLGLVDEGKNYFDEMARVY--NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
SAC+ + + +G ARVY + + +V++ R G EEA+ + R +
Sbjct: 453 AASACAGIKAMRQG---LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 367 TEPNAVI--LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+ L S G R + Q L + +K+ + GA Y + +S++S
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALM-------VFMKM-SQAGAKYNVFTFISAIS 556
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F L + ++ ++ YA+ E+ +L+ +M T + P + V+ AC +
Sbjct: 98 RQVFKELSSRDHV-SWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L G +H+ ++K S+ ++GN L+ +Y +A+ VF +M D V+++++
Sbjct: 157 GKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G C AL++F M+L+ P+ VT+ SL++AC S+ +++ G+ +HSY + G+
Sbjct: 217 ISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGM 276
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D +L+++Y KCG +E A +FNL N+ W +M+ + +F +
Sbjct: 277 SFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M TG+ P+ ++ IL C+ G ++ G+ ++ + M G ++DM +
Sbjct: 337 MQATGIHPNKFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYR 395
Query: 354 LIEEAYHII 362
+++A I+
Sbjct: 396 CLDKARKIL 404
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ GL +D+ IGN L+ +YA + A+ VF+E+ RD VSW +M++G+
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A +++ +M P L S++SACT G IH+ + +G A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ +Y G + A +VF M + ++ +ISG A G G A+ +F +M +GL+PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEA 358
++ +++L+AC+ +G + +GK Y +K M G ++D+ + G IE A
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHS-----YLLKAGMSFDYITEGSLLDLYVKCGDIETA 299
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQV 387
H I N+ N V+ L A +GQ+
Sbjct: 300 -HDIFNLGDRTNVVLWNLMLVA---YGQI 324
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 243/438 (55%), Gaps = 15/438 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISL----------HFTRSLFNNLPVTPPLFAY 69
+LH LFL + H + + FI TSL+ L T +F N+ V + ++
Sbjct: 309 ELHLLFLGRVV-HGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM-VQKNVVSW 366
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+I +Y + + LF EM G RPD F + A L+ G SVH +
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIR 426
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G++ + N L+ MY C ++ AK +F+ + +D++SW+++I G+ + ++A +
Sbjct: 427 NGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSL 486
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F M L PN+VT+ ++ A SL ++ G +H+YA+ G D + AL++MY K
Sbjct: 487 FTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG + A ++F+ + KNL SWTIM++G +GRG AI+LF +M +G+ PD+ SFSAI
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAI 605
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
L ACSH GL DEG +FD M + + I+P ++HY CMVD+L G ++EAY I +MP EP
Sbjct: 606 LYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEP 665
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
++ I S L CR H V L + + + + +LEPE YVL A++ + + W+ +L
Sbjct: 666 DSSIWVSLLRGCRIHRNV-KLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLK 724
Query: 430 VAINQKGLNKVPGCSWVK 447
I +GL + GCSW++
Sbjct: 725 NKIGGRGLRENTGCSWIE 742
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 172/366 (46%), Gaps = 16/366 (4%)
Query: 4 RHIETLIQLSKTVHHLH---QLHTLFLKTSLDHN---TCIISRFILTSLSIS-LHFTRSL 56
R ++QL V L + H L +SL + + + +L L L R +
Sbjct: 92 RSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRV 151
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ +P + + L+ YAK E + LF +M G+RPD +T V+K
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGS 211
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
I G VH L+ K+G S +GN L+ YA A VF+ MP RDV+SW+SMI+G
Sbjct: 212 IEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG 271
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+ A+++F RM L E +S TL+S++ AC L + G +H Y+V G
Sbjct: 272 CTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQ 331
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+L L++MYS C K+F M +KN+ SWT MI+ G + LF +M
Sbjct: 332 TSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGL 391
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRA 352
G +PD + ++ L A + L+ GK+ Y I+ ME +++M +
Sbjct: 392 EGTRPDIFAITSALHAFAGNELLKHGKSVHG-----YAIRNGMEKVLAVTNALMEMYVKC 446
Query: 353 GLIEEA 358
G +EEA
Sbjct: 447 GNMEEA 452
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIF--KVGLDS-DKYIGNTLLRMYAACKEIDVAK 156
D+ +Y V++ C + G H L+ +G D D +G L+ MY C +++ A+
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149
Query: 157 AVFEEMP-VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
VF+EMP V DV W+++++G+ + + +F +M P++ T+ ++ L
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
++ GE +H G A+G AL+ Y+K + A VF+ M +++ SW MI
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
SG NG + AI LF +M G + DS + ++L AC+ L L+ G+
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGR 317
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 261/460 (56%), Gaps = 23/460 (5%)
Query: 15 TVHHLHQLHTLFLKT--SLDHNTCIISRFILTSLS----ISLHFTRSLFNNLPVTPPLFA 68
T+ L Q+H L+T S N + IL S +L + +F++ P P F
Sbjct: 34 TMPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFP-NPNSFM 92
Query: 69 YNTLIRAYAK---TSCSIESIKLFDEML----KTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+NTLIR YA+ T+ ++++L+ M+ KT + PDN T+P V+KAC + G
Sbjct: 93 WNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAV-PDNHTFPIVLKACAYTFSLCEGK 151
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ + K G +SD YI N+L+ YA C +D+A+ +F +M R+ VSW+ MI +
Sbjct: 152 QVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGG 211
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLELDVA 238
AL++F M+ ++ P+ T+ S++SAC L + G +H+Y + + DV
Sbjct: 212 IFDTALRMFGEMQRVHD-PDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVL 270
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT- 297
+ T LV+MY K G +E A +VF M ++L +W MI GLA +G A++ + +M++
Sbjct: 271 VNTCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVE 330
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+ P+SI+F +LSAC+H G+VDEG +FD M + YN++P +EHYGC+VD+ RAG I E
Sbjct: 331 KIVPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINE 390
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN--YVLAASV 415
A +++ M +P+AVI RS L AC + L + + K + + E + ++ YVL + V
Sbjct: 391 ALNLVSEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKV 450
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
+ + W+ L +++KG+ K PGCS +++ DG E
Sbjct: 451 YASACRWNDVGLLRKLMSEKGVTKEPGCSIIEI-DGVVHE 489
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 255/438 (58%), Gaps = 14/438 (3%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIR 74
H H + T +L C+ R L + SL R +F+ +P + ++ +I
Sbjct: 81 HAHMIKTHYL-------PCVYLRTRLIVFYVKCDSLRDARHVFDVMP-ERNVVSWTAMIS 132
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
AY++ + +++ LF +ML++G P+ FT+ V+ +C +G +HS I K+ ++
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEA 192
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
Y+G++LL MYA +I A+ +F+ +P RDVVS +++I+G+ +AL++F R++
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQ 252
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
N VT S+++A + L + G+ +H++ + + + V L +L++MYSKCG++
Sbjct: 253 REGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLT 312
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSAC 313
A ++F+ + E+ + SW M+ G + +G G + LF MI + +KPDS++ A+LS C
Sbjct: 313 YARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372
Query: 314 SHLGLVDEGKN-YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
SH GL D+G + ++D + +++P +HYGC+VDMLGRAG +E A+ ++ MP EP+A
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAA 432
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
I LGAC H L + + +G LL++EPE NYV+ +++ + +G W+ L +
Sbjct: 433 IWGCLLGACSVHSN-LDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLM 491
Query: 433 NQKGLNKVPGCSWVKVND 450
+K + K PG SW++++
Sbjct: 492 LKKAVTKEPGRSWIELDQ 509
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 151/307 (49%), Gaps = 5/307 (1%)
Query: 83 IESIKLFDEMLKTGLR--PDNFT-YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
I +L + +L LR NF Y V+ C R I G VH+ + K Y+
Sbjct: 37 IHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLR 96
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ Y C + A+ VF+ MP R+VVSW++MI+ + S AL +F +M +
Sbjct: 97 TRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTE 156
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T +++++C G IHS+ + E V +G++L++MY+K G + +A +
Sbjct: 157 PNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGI 216
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + E+++ S T +ISG A G A+ LF ++ + G++ + ++++++L+A S L +
Sbjct: 217 FQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAAL 276
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
D GK + + R + + ++DM + G + A I + E + + L
Sbjct: 277 DHGKQVHNHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAMLV 334
Query: 380 ACRNHGQ 386
HG+
Sbjct: 335 GYSKHGE 341
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 235/402 (58%), Gaps = 3/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S R +F + + + ++NT+I A+ S E+ F +ML G P T V+
Sbjct: 296 SARIARLVFKGMR-SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVL 354
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G VH L+ K+ LDS+ + N+L+ MY+ CK +D+A ++F + + V
Sbjct: 355 LACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNV 413
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W++MI G+ +AL +F M+ + TLV +++A R + IH A
Sbjct: 414 TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLA 473
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V ++ +V + TALV+MY+KCG ++ A K+F++M+E+++ +W MI G +G G +
Sbjct: 474 VRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETL 533
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M + +KP+ I+F +++SACSH G V+EG F M Y ++PTM+HY MVD+
Sbjct: 534 DLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDL 593
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG +++A++ I+ MP +P +L + LGAC+ H V L + + L KL+P+ G
Sbjct: 594 LGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNV-ELGEKAAQKLFKLDPDEGGY 652
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+VL A++ + + WD A++ A+ KGL+K PGCSWV++ +
Sbjct: 653 HVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRN 694
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 143/254 (56%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y+ +++ YAK S +++ F M+ +R Y +++ CG L + G +H LI
Sbjct: 113 YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLII 172
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G +S+ ++ ++ +YA C++ID A +FE M +D+VSW++++AG+ AL+
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQ 232
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ +M+ A + P+SVTLVS++ A + +R G SIH YA +G E V + AL++MY
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG A VF MR K + SW MI G A NG A + F KM+ G P ++
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 309 ILSACSHLGLVDEG 322
+L AC++LG ++ G
Sbjct: 353 VLLACANLGDLERG 366
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 15/356 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++ TL+ YA+ + +++L +M + G +PD+ T ++ A + IG S+H
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
F+ G +S + N LL MY C +A+ VF+ M + VVSW++MI G +
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--VALGTAL 243
A F +M E P VT++ ++ AC +L ++ G +H +++ L+LD V++ +L
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHK--LLDKLKLDSNVSVMNSL 388
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ MYSKC V+ A +FN + + N+ +W MI G A NG A++LF M G+K D
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDC 447
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+ +++A + + + K + +A + + +VDM + G I+ A +
Sbjct: 448 FTLVGVITALADFSVNRQAK-WIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLF- 505
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+M E + + + + HG +GK L L E+ V ++ LS
Sbjct: 506 DMMQERHVITWNAMIDGYGTHG--------VGKETLDLFNEMQKGAVKPNDITFLS 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 33/295 (11%)
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I K G ++ ++ ++ A VFE + ++ V + M+ G+ S D
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL F RM L+ C ++++ G IH + NG E ++ + TA++
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+Y+KC ++ A+K+F M+ K+L SWT +++G A NG A+ L +M + G KPDS++
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248
Query: 306 FSAILSACSHLGLVDEGKNY--------FDEMARVYNI---------------------- 335
+IL A + + + G++ F+ + V N
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNHGQV 387
T+ + M+D + G EEA+ M E P V + L AC N G +
Sbjct: 309 SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDL 363
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L ++ +D+N + + + + + ++ R LF+ + + +N +I Y
Sbjct: 469 IHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ-ERHVITWNAMIDGYGTHG 527
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E++ LF+EM K ++P++ T+ V+ AC + G L+FK + D Y+
Sbjct: 528 VGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG----LLLFK-SMQEDYYLEP 582
Query: 141 T------LLRMYAACKEIDVAKAVFEEMPVRDVVS 169
T ++ + ++D A +EMP++ +S
Sbjct: 583 TMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGIS 617
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 228/381 (59%), Gaps = 4/381 (1%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N +I AYA S +S ++F M++ G+ PD FT+ V+KA G + +H LI
Sbjct: 166 SWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLI 225
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS--PSD 185
++G S + +L+ YA C+ + A +++ MP++D++S ++++ G+ A DS S
Sbjct: 226 IQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGY-ARDSNYSSK 284
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL +F ++ + + V L S+ + C ++ ++ G IH+ A+ DVA+G AL++
Sbjct: 285 ALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALID 344
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+K G ++ A + FN M EKN+ SWT +I+G +G G+ AI+LF KM GLKP+ I+
Sbjct: 345 MYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDIT 404
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F ++L AC+H GL EG F+ M YNI P EH+ CMVD+ R GL+EEAY++I M
Sbjct: 405 FLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKM 464
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+PNA + + LGAC +G + L + L K++PE NYV+ A + + +G+WD A
Sbjct: 465 NIKPNASLWGAILGACYIYGN-MPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNA 523
Query: 426 AELMVAINQKGLNKVPGCSWV 446
++ + ++ L K PG S++
Sbjct: 524 WKMRKLMEERNLKKAPGYSFI 544
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 180/374 (48%), Gaps = 15/374 (4%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFIL--TSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
H +H L N + ++ I+ + L ++ R +F+ +P + +++ I Y+
Sbjct: 17 HLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVS-ARKVFDRMP-ERTVVSWSAQISGYS 74
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG--RCLLIGIGGSVHSLIFKVGLDSD 135
+ C +++ +F +ML+ G + + FTY V++AC RCL G+ + + K S+
Sbjct: 75 QNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGM--QIQGCLEKSRFASN 132
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+ + LL +++ C +++ A +F M RDVVSW+++I + D+ ++F M
Sbjct: 133 LIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQ 192
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
SP+ T S++ A +V IH + G ++L +L++ Y+KC +
Sbjct: 193 EGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLAS 252
Query: 256 AFKVFNLMREKNLQSWTIMISGLA-DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A ++ M K++ S T +++G A D+ + A+ LF ++ Q +K D + ++ + C+
Sbjct: 253 AHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICA 312
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTME--HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
++ + G+ A KPT + ++DM ++G I++A M E N +
Sbjct: 313 NISSLSVGRQIH---ALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME-EKNVI 368
Query: 373 ILRSFLGACRNHGQ 386
S + +HG
Sbjct: 369 SWTSLITGYGSHGH 382
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+ I G S+ ++ L+ Y+ + A+ VF+ MP R VVSWS+ I+G+
Sbjct: 16 GHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQ 75
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
DAL VF M A N T S++ ACT L ++ G I + ++ +
Sbjct: 76 NGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIV 135
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+AL++++SKCG +E A +F +M E+++ SW +I A G + +F M+Q G+
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGM 195
Query: 300 KPDSISFSAILSA 312
PD +F ++L A
Sbjct: 196 SPDLFTFGSVLKA 208
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C + G IH+ + NG ++ L T L+ YSK G A KVF+ M E+ + SW
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSW 66
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+ ISG + NG A+ +F M++ G K + ++ ++L AC+ L + G + +
Sbjct: 67 SAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEK 126
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+ ++D+ + G +E+A ++ M E + V + +GA
Sbjct: 127 S-RFASNLIVQSALLDLHSKCGKMEDASYLF-GMMEERDVVSWNAIIGA 173
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 38/251 (15%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L LK ++ + + I + + S + FN + + ++ +LI Y
Sbjct: 322 QIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME-EKNVISWTSLITGYGSH 380
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS-VHSLIFKVGLDSDKYI 138
E+I LF +M GL+P++ T+ ++ AC C L G G +++I K +
Sbjct: 381 GHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEH 440
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+ ++ ++A ++ A + +M ++ S I G A ++ M LA E
Sbjct: 441 FSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILG---------ACYIYGNMPLAEE 491
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
A L + S++ Y V L ++Y+ G + A+K
Sbjct: 492 ------------AAIHLFKMDPENSVN-YVV-------------LADIYAAAGSWDNAWK 525
Query: 259 VFNLMREKNLQ 269
+ LM E+NL+
Sbjct: 526 MRKLMEERNLK 536
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 242/405 (59%), Gaps = 4/405 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLP-VTPPLFAYNTLIRAYAK 78
Q H L LK SL ++ +++ I S + + R + ++ P + ++NT+I Y +
Sbjct: 26 QFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIR 85
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
++++ F +M K +R D T V+ AC R + +G H+L+ G + + YI
Sbjct: 86 GGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYI 145
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++L+ MYA C ++ A+ VF MP R+VV W+SMIAG +A+ +F M++A
Sbjct: 146 GSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGV 205
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T+ ++VS+C + + G +H+Y +GL ++++ +L++MYSKCG V KA++
Sbjct: 206 KADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQ 265
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLG 317
+F + ++++ +WT+MI G A NG A+ LFA+M + + P+ + F +L+ACSH G
Sbjct: 266 IFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGG 325
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G ++F M++VYN+ P +EHYGCMVD+LGRA L+ EA I++MP P+ V+ RS
Sbjct: 326 LVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSL 385
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
L ACR GQV L + + + +LEP+ +VL ++V + + W
Sbjct: 386 LFACRASGQV-GLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRW 429
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 150/268 (55%), Gaps = 3/268 (1%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
DN++ + A R + +G H+L K+ L SD ++ N L+ MY++C A+ V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 160 EEMP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+ P DVVSW+++IAG++ P+ AL+ FH+M + VTL++++ AC
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
++ G H+ V+NG E++ +G++LV MY+KCG VE+A +VFN M E+N+ WT MI+G
Sbjct: 124 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAG 183
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
+GR A+ LF M G+K D + + ++S+C +G +D G+ Y + +
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR-YLHAYCDGHGLGK 242
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ ++DM + G + +AY I R +
Sbjct: 243 ELSVKNSLIDMYSKCGDVNKAYQIFRGL 270
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +K + + + I + S L R + L + ++ ++I Y +
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIAGYVQH 425
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ F EM G+ PDN AC + G +H+ ++ G +D I
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NTL+ +YA C + A ++F E+ +D ++W+ +I+GF AL VF +M A
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAK 545
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N T +S +SA +L +++ G+ +H AV G + + AL+ +Y KCG +E A +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M +N SW +I+ + +GRG A+ LF +M Q GLKP+ ++F +L+ACSH+GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG +YF M+ VY + P +HY C+VD+LGRAG ++ A + MP NA+I R+ L
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
AC+ H + + + K LL+LEP A+YVL ++ +++G W ++ + +G+ K
Sbjct: 726 ACKVHKNI-EIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 440 VPGCSWVKVND 450
PG SW++V +
Sbjct: 785 EPGRSWIEVKN 795
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 190/371 (51%), Gaps = 8/371 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
QLH+ LK + + I+ L L + + +FN L + +N ++ AY
Sbjct: 266 QLHSYLLKAGMSFD--YITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYG 322
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S +S ++F +M TG+ P+ FTYP +++ C I +G +HSL K G +SD Y
Sbjct: 323 QISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMY 382
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ MY+ +D A+ + E + RDVVSW+SMIAG+V D +AL F M+
Sbjct: 383 VSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG 442
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+++ L S SAC + +R G IH+ V+G D+++ LV +Y++CG E+AF
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F + K+ +W +ISG + A+ +F KM Q G K + +F + +SA ++L
Sbjct: 503 SLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLA 562
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+ +GK + + T E ++ + G+ G IE+A I M N V +
Sbjct: 563 DIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTI 620
Query: 378 LGACRNHGQVL 388
+ +C HG+ L
Sbjct: 621 ITSCSQHGRGL 631
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 15/355 (4%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+NTLI +A+ ++++FDEM +GLRPD T ++ AC + G +HS +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G+ D +LL +Y C +I+ A +F +VV W+ M+ + + + +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M+ PN T ++ CT + GE IHS ++ NG E D+ + L++MYS
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
K G ++KA K+ ++ ++++ SWT MI+G + A++ F +M G+ PD+I ++
Sbjct: 393 KYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 309 ILSACSHLGLVDEGKNYFDEMARVY--NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
SAC+ + + +G ARVY + + +V++ R G EEA+ + R +
Sbjct: 453 AASACAGIKAMRQG---LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 367 TEPNAVI--LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+ L S G R + Q L + +G + GA Y + +S++S
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMG--------QAGAKYNVFTFISAIS 556
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F L + ++ ++ YA++ E+ +L+ +M T + P + V+ AC +
Sbjct: 98 RQVFKELSSRDHV-SWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L G +H+ ++K S+ ++GN L+ +Y +A+ VF +M D V+++++
Sbjct: 157 GKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G C AL++F M+L+ P+ VT+ SL++AC S+ +++ G+ +HSY + G+
Sbjct: 217 ISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGM 276
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D +L+++Y KCG +E A +FNL N+ W +M+ + +F +
Sbjct: 277 SFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M TG+ P+ ++ IL C+ G ++ G+ ++ + M G ++DM + G
Sbjct: 337 MQATGIHPNQFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYG 395
Query: 354 LIEEAYHII 362
+++A I+
Sbjct: 396 CLDKARKIL 404
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ GL +D+ IGN L+ +YA + A+ VF+E+ RD VSW +M++G+
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A +++ +M P L S++SACT G IH+ + +G A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+ +Y G + A +VF M + ++ +ISG A G G A+ +F +M +GL+PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEA 358
++ +++L+AC+ +G + +GK Y +K M G ++D+ + G IE A
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHS-----YLLKAGMSFDYITEGSLLDLYVKCGDIETA 299
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQV 387
H I N+ N V+ L A +GQ+
Sbjct: 300 -HDIFNLGDRTNVVLWNLMLVA---YGQI 324
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 243/452 (53%), Gaps = 13/452 (2%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L Q + +H LF+ L N IS+ F S S SL + +F+ + P
Sbjct: 9 SLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQ-NP 67
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
LFAYNTLIRAY+++S ++ F ML + PD T+PF++ AC L + +G +
Sbjct: 68 NLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQI 127
Query: 124 HSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+ + K G+ SD+++ L+R YA C + A+ +F+E+P DVV W+ ++ G+V
Sbjct: 128 HNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGL 187
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGT 241
+AL F M ++ P+ L + + C L ++ G+ IH Y LE DV +GT
Sbjct: 188 APEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGT 247
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLK 300
ALV+MY+KCG ++++ +VF M ++N+ SW+ MI G A +G A+ +M ++ GL+
Sbjct: 248 ALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLR 307
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD + ++ AC+H GL +EG+ + M Y I P EHY CMVD+L RAG ++EA
Sbjct: 308 PDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALK 367
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL----KLEPELGANYVLAASVS 416
+IR MP +P A + + L CR H V + +LL+ E GA YV +++
Sbjct: 368 LIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGA-YVQLSNIY 426
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ + A + I K + PGCS ++V
Sbjct: 427 LAAQKCEDACRIRRMIGDKRIKTKPGCSLIEV 458
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM--YSKCGHVEKAFKVFNLM 263
+SL +C+ N+R ++IH+ +VNGL L+ + L+ S G + A +F+ +
Sbjct: 8 ISLAQSCS---NMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHL------ 316
+ NL ++ +I + + A+ F M+ + PD +F I+SAC++
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 317 ----------GLVDEGKNYFDEMARVY-------------NIKPTME--HYGCMVDMLGR 351
G+ ++ + R Y + P ++ + +++ R
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVR 184
Query: 352 AGLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHG 385
GL EA + RNM EP+ L + L C G
Sbjct: 185 RGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLG 221
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 238/454 (52%), Gaps = 16/454 (3%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL------SISLHFTRSLFNN 59
++ + + + H LH L S +T +++ F+ SL L R LF+
Sbjct: 435 LQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 494
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P + +YN +I AYA C+ ++LF EM K G Y ++ G + I
Sbjct: 495 MPERDNV-SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 553
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+ + +GL S+ +GN L+ MY+ C +D AK+ F + +SW+++I G+V
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+AL++F M+ A P+ T S++ A +SL + G +HSY + +G + V
Sbjct: 614 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 673
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G+ LV+MY+KCG +++A + F+ M E+N SW +IS A G AI +F M+ G
Sbjct: 674 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 733
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
PDS++F ++L+ACSH GL DE YF M Y+I P EHY C++D LGR G +
Sbjct: 734 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 793
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASV 415
++ MP + + +I S L +CR HG + L ++ L +EP YV+ +++
Sbjct: 794 KMLVEMPFKADPIIWTSILHSCRIHG-----NQELARVAADKLFGMEPTDATPYVILSNI 848
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ +G W+ AA + + +G+ K G SWV++
Sbjct: 849 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIK 882
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 42/378 (11%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF---------A 68
HLH+ +F + H IL++ S S +LP LF
Sbjct: 272 HLHRARAMF--DQMPHKNIFSLNLILSAYSSS--------GDLPAAQHLFLSSPHRNATT 321
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++RA+A + +++ LF ML G+ PD T V+ G C + S+H
Sbjct: 322 WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-CTV----PSLHPFAI 376
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K GLD+ ++ NTLL Y + A+ VF EM +D V++++M+ G + AL+
Sbjct: 377 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 436
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+ A S + + L+ + + +V L+V + +L++ YS
Sbjct: 437 LFAAMRRAGYSRHPLHLLQYSHSRSRSTSV----------------LNVFVNNSLLDFYS 480
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC ++ ++F+ M E++ S+ ++I+ A N + LF +M + G + ++
Sbjct: 481 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 540
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LS L V GK ++ + + ++DM + G+++ A N +E
Sbjct: 541 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR-SE 598
Query: 369 PNAVILRSFLGACRNHGQ 386
+A+ + + +GQ
Sbjct: 599 KSAISWTALITGYVQNGQ 616
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 59/258 (22%)
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS-------------------- 169
G D Y N LR + + A+A+F++MP +++ S
Sbjct: 251 TGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHL 310
Query: 170 -----------WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS--ACTSLI 216
W+ M+ A SDAL +F M P+ VT+ ++++ CT
Sbjct: 311 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-- 368
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
S+H +A+ GL+ V + L++ Y K G + A +VF M +K+ ++ M+
Sbjct: 369 -----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 423
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISF-------------------SAILSACSHLG 317
G + G A+ LFA M + G + +++L S
Sbjct: 424 GCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCD 483
Query: 318 LVDEGKNYFDEMARVYNI 335
+D+ + FDEM N+
Sbjct: 484 CLDDMRRLFDEMPERDNV 501
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 233/418 (55%), Gaps = 10/418 (2%)
Query: 35 TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
+CI +R + ++ R++F+ + P + +NTL+ Y + ++I+LF M
Sbjct: 361 SCIKARDVPSA--------RAMFDKIS-KPSVTTWNTLLSGYGQEELHQDTIELFRRMQH 411
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
++PD T ++ C R ++ +G VHS K+ L +D ++ + L+ MY+ C ++ +
Sbjct: 412 QNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGI 471
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F M RDVV W+SMI+G +A F +M+ P + S++++C
Sbjct: 472 AQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCAR 531
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L ++ G IH+ + +G + +V +G++L++MY+KCG+++ A FN M KN+ +W M
Sbjct: 532 LSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEM 591
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I G A NG G A+ LF M+ T KPDS++F A+L+ CSH GLVDE YF+ M Y
Sbjct: 592 IHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYG 651
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I+P +EHY C++D LGRAG E +I MP + +A++ L AC H L +
Sbjct: 652 IRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNA-ELGEFA 710
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
K L +L+P+ + YVL +++ + G A+ + ++ +G+ K G SWV DG+
Sbjct: 711 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGA 768
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 175/347 (50%), Gaps = 17/347 (4%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R L +P + ++NT+I A A++ E+++++ ML+ GL P NFT V+
Sbjct: 92 LAAARDLLGRMPDRNAV-SWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLS 150
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG + G H L KVGLD ++++ N LL MY C + A +F+ M + VS
Sbjct: 151 ACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVS 210
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLI--------NVRAG 221
+++M+ G + DAL++F RM + + V + S++ AC +R
Sbjct: 211 FTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLA 270
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+SIH+ V G + D +G +L++MY+K +++A KVF M ++ SW I+++G
Sbjct: 271 QSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQL 330
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G A+ + M ++G +P+ +++S +L++C V + FD+++ KP++
Sbjct: 331 GCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIS-----KPSVTT 385
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHG 385
+ ++ G+ L ++ + R M +P+ L L C G
Sbjct: 386 WNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLG 432
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 187/410 (45%), Gaps = 70/410 (17%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
+++ + +H L ++ D + + + I + + + + +F ++ + + ++N
Sbjct: 263 VARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-SVSIVSWN 321
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y + C ++++ D M ++G P+ TY ++ +C +
Sbjct: 322 ILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKA---------------- 365
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
+++ A+A+F+++ V +W+++++G+ + D +++F
Sbjct: 366 -------------------RDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELF 406
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ N P+ TL ++S C+ L + G+ +HS +V L D+ + + L++MYSKC
Sbjct: 407 RRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKC 466
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G V A +FN+M E+++ W MISGLA + A F +M + G+ P S+++++
Sbjct: 467 GQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMI 526
Query: 311 SACSHLGLVDEGK-------------------NYFDEMARVYNIKPTMEHYGCMV----- 346
++C+ L + +G+ + D A+ N+ + CM+
Sbjct: 527 NSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIV 586
Query: 347 ---DML---GRAGLIEEAYHIIRNMPT---EPNAVILRSFLGACRNHGQV 387
+M+ + G E+A + M T +P++V + L C + G V
Sbjct: 587 AWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLV 636
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Query: 147 AACKEIDVAKA--VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
AAC+ D+A A + MP R+ VSW+++IA DSP +AL+++ M +P + T
Sbjct: 85 AACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFT 144
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L S++SAC ++ + G H AV GL+ + + L+ MY+KCG V A ++F+ M
Sbjct: 145 LASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMS 204
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
N S+T M+ GLA +G + A+ LFA+M ++ ++ D ++ S++L AC+
Sbjct: 205 SPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQ 255
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 165/374 (44%), Gaps = 47/374 (12%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
+ H L +K LD N + + + + + S+ LF+ + +P ++ ++ A+
Sbjct: 162 RRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMS-SPNEVSFTAMMGGLAQ 220
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL--------LIGIGGSVHSLIFKV 130
+ ++++LF M ++ +R D V+ AC + I + S+H+L+ +
Sbjct: 221 SGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRK 280
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G DSD+++GN+L+ MYA ++D A VFE M +VSW+ ++ G+ AL+V
Sbjct: 281 GFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVL 340
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ + PN VT +++++C K
Sbjct: 341 DLMQESGFEPNEVTYSNMLASCI-----------------------------------KA 365
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
V A +F+ + + ++ +W ++SG I LF +M ++PD + + IL
Sbjct: 366 RDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVIL 425
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S CS LG+++ GK ++ + M ++DM + G + A II NM TE +
Sbjct: 426 STCSRLGILELGKQVHSASVKLL-LHNDMFVASGLIDMYSKCGQVGIA-QIIFNMMTERD 483
Query: 371 AVILRSFLGACRNH 384
V S + H
Sbjct: 484 VVCWNSMISGLAIH 497
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
A + + G + A + M ++N SW +I+ +A + A+ ++ M+Q GL P
Sbjct: 81 AAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAP 140
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ + +++LSAC + +D+G+ +V G ++ M + G + +A +
Sbjct: 141 TNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENG-LLGMYTKCGSVADAVRL 199
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQV---LYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
M + PN V + +G G V L L + + ++++P + + VL A +
Sbjct: 200 FDWM-SSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDP-VAVSSVLGACAQAC 257
Query: 419 SGNWDTAAELMVA 431
+G+++ A + +A
Sbjct: 258 AGDYNVARAIRLA 270
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 232/396 (58%), Gaps = 4/396 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++F+NL + ++N +I YA +E+I+ +M +TG P+ T+ V+ AC R
Sbjct: 418 TIFHNLD-RRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARL 476
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+G G +H++ ++GL SD ++ N+L+ MYA C + A+ VF +D VS++ +I
Sbjct: 477 GFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILI 535
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+ D +L +F M+L + P+ V+ V ++SAC +L ++ G+ +H A+ N L
Sbjct: 536 IGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLY 595
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ + +L++ Y+KCG ++ A ++FN + K++ SW MI G G AIS+F M
Sbjct: 596 SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM 655
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
++ D +S+ A+LSACSH GLV+ G YF EM ++PT HY CMVD+LGRAG
Sbjct: 656 RDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYTCMVDLLGRAGF 714
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+EEA +I+ +P P+A I + LGACR +G V L + L +L+P+ Y+L ++
Sbjct: 715 VEEAAKLIQQLPIAPDANIWGALLGACRIYGNV-ELGRRAAEHLFELKPQHCGYYILLSN 773
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +G WD A ++ + +G K PGCSWV++ D
Sbjct: 774 IYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYD 809
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 171/314 (54%), Gaps = 4/314 (1%)
Query: 55 SLFNN-LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
SLFN F +NTLIRA++ + + + + ++ M++ G++ D+ T+PFV+K C
Sbjct: 111 SLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCS 170
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
I G VH ++FK+G D+D Y+GNTLL +Y C ++ A+ +F+EMP RDVVSW++
Sbjct: 171 DSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNT 230
Query: 173 MIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+I ++A + M L + PN V+++SL+ +L + IH Y+V
Sbjct: 231 IIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKV 290
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
GL+ V ALV+ Y KCG V+ ++VFN EKN SW +I+GLA GR A++ F
Sbjct: 291 GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAF 350
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
MI G +P+S++ S+IL L GK R+ + + ++DM +
Sbjct: 351 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRM-GTETDIFIANSLIDMYAK 409
Query: 352 AGLIEEAYHIIRNM 365
+G EA I N+
Sbjct: 410 SGHSTEASTIFHNL 423
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%), Gaps = 1/256 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A +++ F M+ G +P++ T ++ G +H
Sbjct: 329 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 388
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++G ++D +I N+L+ MYA A +F + R++VSW++MIA + P +A+
Sbjct: 389 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 448
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ +M+ E PN+VT +++ AC L + G+ IH+ V GL D+ + +L++MY
Sbjct: 449 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 508
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG + A VFN R K+ S+ I+I G ++ +++LF++M G KPD +SF
Sbjct: 509 AKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 567
Query: 308 AILSACSHLGLVDEGK 323
++SAC++L + +GK
Sbjct: 568 GVISACANLAALKQGK 583
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H KVGLDS N L+ Y C + VF E ++ VSW+S+I G
Sbjct: 283 IHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGR 342
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
DAL F M A PNSVT+ S++ L +AG+ IH +++ G E D+ + +
Sbjct: 343 CWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANS 402
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY+K GH +A +F+ + +N+ SW MI+ A N AI +M +TG P+
Sbjct: 403 LIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPN 462
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+++F+ +L AC+ LG + GK R+ + + ++DM + G + A ++
Sbjct: 463 AVTFTNVLPACARLGFLGPGKEIHAMGVRI-GLTSDLFVSNSLIDMYAKCGCLHSARNVF 521
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 239/407 (58%), Gaps = 11/407 (2%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+++LF + V + ++NT+I +++++ E++ F M+ G+ D T V+ AC
Sbjct: 167 SKALFESF-VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACS 225
Query: 113 RCLLIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ +G +H+ + + L + ++G+ L+ MY C++++ + VF+ + R + W+
Sbjct: 226 HLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 285
Query: 172 SMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACT-SLINVRAGESIHSYAV 229
+MI+G+ AL +F M K+A PN+ T+ S++ AC SL + G+ IH+YA+
Sbjct: 286 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAI 345
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
N L D+ +G+ALV+MY+KCG + + +VFN M KN+ +W ++I +G+G A+
Sbjct: 346 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALE 405
Query: 290 LFAKMIQTG-----LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
LF M+ KP+ ++F + +ACSH GL+ EG N F M + ++PT +HY C
Sbjct: 406 LFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYAC 465
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
+VD+LGRAG +EEAY ++ MP E + V S LGACR H Q + L + K LL LEP
Sbjct: 466 VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH-QNVELGEVAAKNLLHLEP 524
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ ++YVL +++ S +G W+ A E+ + Q G+ K PGCSW++ D
Sbjct: 525 NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 571
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 170/342 (49%), Gaps = 34/342 (9%)
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+R+ +++ E+I + EM +G RPDNF +P V+KA + G +H+ K G
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 133 DS--------------------DK-YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
S DK + N L+ MYA +D +KA+FE RD+VSW+
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 183
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
+MI+ F D S+AL F M L + VT+ S++ AC+ L + G+ IH+Y + N
Sbjct: 184 TMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN 243
Query: 232 G-LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
L + +G+ALV+MY C VE +VF+ + + ++ W MISG A NG A+ L
Sbjct: 244 NDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALIL 303
Query: 291 FAKMIQ-TGLKPDSISFSAILSACSH-LGLVDEGKNYFDEMARVYNIKPTMEHY----GC 344
F +MI+ GL P++ + ++++ AC H L + +GK Y I+ +
Sbjct: 304 FIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEI-----HAYAIRNMLASDITVGSA 358
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G + + + MP + N + + AC HG+
Sbjct: 359 LVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGK 399
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P R SW + + +A+ + M ++ P++ +++ A + L +++ GE
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 223 SIHSYAVVNGL-ELDVALGTALVEMYSKC--------------------GHVEKAFKVFN 261
IH+ AV G V + LV MY KC G V+ + +F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
++++ SW MIS + + R + A++ F M+ G++ D ++ +++L ACSHL +D
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 322 GK 323
GK
Sbjct: 233 GK 234
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 239/441 (54%), Gaps = 14/441 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLD------HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPL 66
S+++ QLH LK L HN +I+ + T L + F+ +F+ P
Sbjct: 38 SRSLRQGLQLHAHILKFGLQTIPLVSHN--LINLYSKTQLPL---FSLQVFDETPKKSST 92
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++++I A+A+ + +++ F ML G+RPD+ YP KACG +G SVH L
Sbjct: 93 -TWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCL 151
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G D ++G++L+ MYA C EI A+ +F+EMP R+VVSWS MI G+ D +A
Sbjct: 152 AVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEA 211
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F + + + N T S++ C+S + G+ IH + + +G+AL+ +
Sbjct: 212 LTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG +E A++VF+ + +NL W M+ A + LF +M G+KP+ ISF
Sbjct: 272 YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISF 331
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++L ACSH GLV++G+ YF M R Y I+P EHY +VD+LGRAG ++EA +I+ MP
Sbjct: 332 LSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMP 390
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P + + L CR H + + +L+++ +VL ++ + +G ++ AA
Sbjct: 391 MRPTESVWGALLTGCRIHKDT-EMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAA 449
Query: 427 ELMVAINQKGLNKVPGCSWVK 447
+ + +G+ K G SWV+
Sbjct: 450 RMRKMLRDRGVKKETGLSWVE 470
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N + +L+ + T ++R G +H++ + GL+ + L+ +YSK + +VF
Sbjct: 24 NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ +K+ +W+ +IS A N A+ F +M+ G++PD + + AC L D
Sbjct: 84 DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143
Query: 321 EGKNYFDEMARVYNIKPTMEHY------GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
GK+ V+ + +Y +VDM + G I +A H+ MP E N V
Sbjct: 144 VGKS-------VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVV-- 193
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLL 399
S+ G + Q LDD + L L
Sbjct: 194 -SWSGMIYGYAQ---LDDGVEALTL 214
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 208/367 (56%), Gaps = 1/367 (0%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++++LF + K+G + D T KACG +L+ G +H+ K G DSD ++ + +L
Sbjct: 13 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
MY C ++ A VF + D V+W+SMI+G V + AL+++HRM+ + P+
Sbjct: 73 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 132
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T +L+ A + + + G +H+ + D +GT+LV+MY+KCG++E A+++F M
Sbjct: 133 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 192
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+N+ W M+ GLA +G A++LF M G++PD +SF ILSACSH GL E
Sbjct: 193 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 252
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
Y M Y I+P +EHY C+VD LGRAGL++EA +I MP + +A I R+ LGACR
Sbjct: 253 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 312
Query: 384 HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGC 443
G V + L LEP A YVL +++ + + WD + + +K + K PG
Sbjct: 313 QGDV-EXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGF 371
Query: 444 SWVKVND 450
SW+ V +
Sbjct: 372 SWIDVKN 378
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 113/215 (52%), Gaps = 6/215 (2%)
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
M+ G++ + AL++F + + E + +TL + AC L+ + G+ IH++A+ G
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ D+ + + +++MY KCG + A VFN + + +WT MISG DNG + A+ ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLG 350
+M Q+ + PD +F+ ++ A S + +++G+ A V + + + +VDM
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH---ANVIKLDCVSDPFVGTSLVDMYA 177
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G IE+AY + + M N + + L HG
Sbjct: 178 KCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHG 211
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
Q+H +K D + + S + + + N P A+ ++I
Sbjct: 51 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 110
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
++++++ M ++ + PD +T+ ++KA + G +H+ + K+ SD ++G
Sbjct: 111 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT 170
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+L+ MYA C I+ A +F++M VR++ W++M+ G + +A+ +F MK P
Sbjct: 171 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 230
Query: 201 NSVTLVSLVSACT-SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ V+ + ++SAC+ + + A E +HS G+E ++ + LV+ + G V++A KV
Sbjct: 231 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 290
Query: 260 FNLM 263
M
Sbjct: 291 IETM 294
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 232/401 (57%), Gaps = 10/401 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F N+++R + S ++++ M G R + FT ++K RC L +
Sbjct: 88 PSTFQCNSILRVLSDPS---DALRFLRRMRALGRRGNAFTLAILLKP--RCAL-AHARQL 141
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ + G D + +L+ YA + D A+ +F EMP RD V+W+ +I+
Sbjct: 142 HANVVAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRT 201
Query: 184 SDALKVFHRMKLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
DALK+F M+ + P+ VT + L+ ACTSL + GE + +YA +G + +
Sbjct: 202 KDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRN 261
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L+ MYS+CG V+KA++VF +K++ +W+ MISGLA NG G+ AIS F +MI++ + P
Sbjct: 262 SLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAP 321
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D +F+ +LSACSH GLVDEG +FD M Y +KP + HYGC+VD++GRAGL++EAY +
Sbjct: 322 DEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEL 381
Query: 362 IRN-MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+ N M P+A I R+ LGACR HG V L + + L++L+ + +YVL + + G
Sbjct: 382 VTNEMKVAPDATIWRTLLGACRIHGHV-DLGERVISNLIELKAQQAGDYVLLLNTYAAVG 440
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
W +E+ + +KG+ PGC+ V+ N E ++ + A
Sbjct: 441 EWSKVSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDA 481
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 229/418 (54%), Gaps = 33/418 (7%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F + ++ + + +E++ +F +M + G D VV AC + +I G H L
Sbjct: 235 FTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGL 294
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEI-------------------------------DVA 155
+ + GL S + N L+ MY++C+++ + A
Sbjct: 295 VVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDA 354
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
KA+F+ MP +D VSWS+MIAG V + S+AL VF M+ P+ VTLVS++SAC++L
Sbjct: 355 KALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNL 414
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ G+ +H Y + + LGT+L++MY KCG +E A +VF+++ EK W +I
Sbjct: 415 SALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVI 474
Query: 276 SGLADNGRGNYAISLFAKMIQTGLK-PDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
GLA NG ++ +F++M TG P+ I+F+ +LSAC H GLV+EG+ +F M Y
Sbjct: 475 VGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQ 534
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I P + HYGCMVD+LGRAG + EA +I++MP P+ + LGAC HG + + +
Sbjct: 535 IVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDS-EVGERV 593
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
GK L+KL+P+ + +++ + G W +L ++ Q+ + KV GCS V+ + S
Sbjct: 594 GKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVEPSHSS 651
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 179/455 (39%), Gaps = 108/455 (23%)
Query: 11 QLSK--TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS--------LHFTRSLFNNL 60
QLS+ + HL Q+H FL + L + SR +L + S + LH + LF L
Sbjct: 10 QLSRCCSARHLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLFG-L 68
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
+P F NTL++A + L+ M PD +T+P + AC + G
Sbjct: 69 VRSPNAFTCNTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACAARGDVREG 125
Query: 121 GSVHSLIFKVGLDSDKYI-------------------------------GNTLLRMYAAC 149
VHS K G + Y+ NT+L Y
Sbjct: 126 LQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRD 185
Query: 150 KEIDVAKAVFEEMPVR-------------------------------DVVSWSSMIAGFV 178
+++ A VF MP R D +W++M++ F
Sbjct: 186 GDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFE 245
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
D +AL VF M+ + +VS+V+AC ++ GE H V GL V
Sbjct: 246 RNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVN 305
Query: 239 LGTALVEMYSKC-------------------------------GHVEKAFKVFNLMREKN 267
+ L+ MYS C G VE A +F++M +K+
Sbjct: 306 VQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKD 365
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
SW+ MI+G N + + A+++F M +KPD ++ +++SACS+L +++GK
Sbjct: 366 NVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGK-LVH 424
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
E R Y T+ ++DM + G +E A +
Sbjct: 425 EYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVF 459
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 229/407 (56%), Gaps = 39/407 (9%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I Y + E+I+LF EM+ + GL P++ T V+ AC RC +HS +
Sbjct: 357 WNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCV 416
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K G + DKY+ N L+ MY+ I++A+++F M +D+VSW++MI G+V C DAL
Sbjct: 417 VKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDAL 476
Query: 188 KVFHRMKLANES------------------PNSVTLVSLVSACTSLINVRAGESIHSYAV 229
+ H M+ PNSVTL++++ C +L + G+ IH+YAV
Sbjct: 477 NLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 536
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
L DVA+G+ALV+MY+KCG + + VF M +N+ +W ++I +G+G A+
Sbjct: 537 KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596
Query: 290 LFAKMIQTG-----LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
LF +M++ G ++P+ +++ AI ++ SH G+VDEG N F M + I+PT +HY C
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAV-ILRSFLGACRNHGQVLYLDDNLGKLLLKLEP 403
+VD+LGR+G IEEAY++I+ MP+ V S LGAC+ H Q L + + K L L+P
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH-QNLEIGEIAAKNLFVLDP 715
Query: 404 ELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
N + + S+ G + +KG+ K PGCSW++ D
Sbjct: 716 ----NVLDYGTKQSMLGR---------KMKEKGVRKEPGCSWIEHGD 749
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 149/253 (58%), Gaps = 3/253 (1%)
Query: 73 IRAYAKTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+R+ ++S + ++I + M+ G+ PDNF +P V+KA + +G +H+ +FK G
Sbjct: 56 LRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG 115
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+ N+L+ MY C +ID A+ VF+E+ RD VSW+SMI + A+ +F
Sbjct: 116 QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFR 175
Query: 192 RMKLANESPNSVTLVSLVSACTSLIN-VRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M L N P S TLVS+ AC++LIN + G+ +H++ + NG + ALV MY+K
Sbjct: 176 LMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKL 234
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G V +A +F++ +K+L SW +IS L+ N R A+ M+Q+G++P+ ++ +++L
Sbjct: 235 GRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVL 294
Query: 311 SACSHLGLVDEGK 323
ACSHL ++ GK
Sbjct: 295 PACSHLEMLGCGK 307
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 32/346 (9%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++NT+I + ++ E++ ML++G+RP+ T V+ AC ++G G +H+
Sbjct: 252 LVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHA 311
Query: 126 LIF-KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ L + ++G L+ MY CK+ + + VF+ M R + W++MIAG+V +
Sbjct: 312 FVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDY 371
Query: 185 DALKVFHRMKLA-NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A+++F M SPNSVTL S++ AC + E IHS V G E D + AL
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNAL 431
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG----- 298
++MYS+ G +E A +F M K++ SW MI+G GR + A++L M Q G
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQAEHR 490
Query: 299 --------------LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY-- 342
LKP+S++ +L C+ L + +GK Y +K +
Sbjct: 491 INTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI-----HAYAVKQMLSKDVA 545
Query: 343 --GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+VDM + G + + + M N + + A HG+
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGK 590
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 23/310 (7%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI--GGSVHS 125
++N++I A + ++ LF ML + P +FT V AC L+ G+ G VH+
Sbjct: 153 SWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSN-LINGLLLGKQVHA 211
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ + G D + N L+ MYA + AK +F+ +D+VSW+++I+ D +
Sbjct: 212 FVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEE 270
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALV 244
AL H M + PN VTL S++ AC+ L + G+ IH++ ++N L + +G ALV
Sbjct: 271 ALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALV 330
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDS 303
+MY C EK VF+ M + + W MI+G N AI LF +M+ + GL P+S
Sbjct: 331 DMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNS 390
Query: 304 ISFSAILSACSHLG--LVDEG------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
++ S++L AC L EG K F++ V N ++DM R G I
Sbjct: 391 VTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQN---------ALMDMYSRMGRI 441
Query: 356 EEAYHIIRNM 365
E A I +M
Sbjct: 442 EIARSIFGSM 451
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +K L + + S + + + L+ +R++F + V + +N LI AY
Sbjct: 530 EIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRN-VITWNVLIMAYGMH 588
Query: 80 SCSIESIKLFDEMLKTG-----LRPDNFTYPFVVKACGRCLLIGIGGSV-HSLIFKVGLD 133
E++KLF M++ G +RP+ TY + + ++ G ++ +++ K G++
Sbjct: 589 GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIE 648
Query: 134 --SDKYIGNTLLRMYAACKEIDVAKAVFEEMP--VRDVVSWSSMIAG 176
SD Y L+ + +I+ A + + MP ++ V +WSS++
Sbjct: 649 PTSDHYA--CLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 218/393 (55%), Gaps = 1/393 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF +P + +YN L+ YA ES++LF E+ TG NF + ++ L
Sbjct: 356 LFYEMPEVDGI-SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 414
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ IG +HS S+ +GN+L+ MYA C E A +F ++ ++ V W++MI+
Sbjct: 415 NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMIS 474
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+V D LK+F M+ A ++ T S+V AC SL ++ G+ +HS+ + +G
Sbjct: 475 SYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS 534
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+V G+ALV+MY+KCG ++ A ++F M +N SW +IS A NG G+ + LF +M+
Sbjct: 535 NVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMV 594
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
++GL+PDS+S +IL ACSH GLV+EG YFD M R+Y + P EHY +DML R G
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRF 654
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
+EA ++ MP EP+ ++ S L +C H +L A YV +++
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ +G WD ++ A+ ++G+ KVP SWV++
Sbjct: 715 YAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEI 747
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 194/407 (47%), Gaps = 14/407 (3%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSL--SISLHFTRSLFNNLPVTPPLFAYNTL 72
+V+ + Q+H+ +K D +T ++S +L S + SL LFN++P + +N L
Sbjct: 213 SVNEVRQVHSHVIKLGYD-STLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSV-TFNAL 270
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+ Y+K + E+I LF +M + G RP FT+ ++ A + I G VH + K
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ ++ N LL Y+ + A +F EMP D +S++ ++ + ++L++F
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
++ + +L+S +N+ G IHS +V ++ +G +LV+MY+KCG
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGE 450
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+A ++F+ + ++ WT MIS G + LF +M + + D+ ++++I+ A
Sbjct: 451 FGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRA 510
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
C+ L + GK + I +VDM + G I++A + + MP N+V
Sbjct: 511 CASLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAKCGSIKDALQMFQEMPVR-NSV 568
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+ + A Y + G L+L E+ + + SVS LS
Sbjct: 569 SWNALISA--------YAQNGDGDCTLRLFEEMVRSGLQPDSVSLLS 607
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 153/341 (44%), Gaps = 27/341 (7%)
Query: 35 TCIISRFILTSL----SISLHFTRSLFNNL--PVTPPLFAYNTLIRAYAKTSCSIESIKL 88
TC+I I T+ S T SL NN+ P T L T + + SI
Sbjct: 39 TCVIC-LIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASI----- 92
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
+KTG P+ + F+VK+ L G L F + + NT++ Y
Sbjct: 93 ----IKTGFNPNTYRSNFLVKSF---LQRGDLNGARKL-FDEMPHKNIFSTNTMIMGYIK 144
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
+ A+ +F+ M R V+W+ +I G+ + +A +F M P+ V+L +L
Sbjct: 145 SGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATL 204
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+S T +V +HS+ + G + + + +L++ Y K + AF++FN + E++
Sbjct: 205 LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDE 328
++ +++G + G AI+LF KM + G +P +F+AIL+A L ++ G+
Sbjct: 265 VTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324
Query: 329 MAR---VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ + V+N+ ++D + + EA + MP
Sbjct: 325 VVKCNFVWNVFVA----NALLDFYSKHDRVVEASKLFYEMP 361
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 266/488 (54%), Gaps = 54/488 (11%)
Query: 12 LSKTVH--HLHQLHTLFLKTSLDHNTCIISRFIL---TSLSIS-LHFTRSLFNNLPVTPP 65
L + +H HL QL + +L H F L +L++S L + R +F+++ +P
Sbjct: 62 LERCIHLNHLKQLQAFLI--TLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVE-SPN 118
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVH 124
++ Y +I AYA S ++ L+ M++ P++F YP V+K+C + + G VH
Sbjct: 119 VYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVH 178
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAA-CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC--- 180
+ + G + + LL Y +++ A+ +F+EM R+VVSW++MI+G+
Sbjct: 179 CQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQI 238
Query: 181 -------------DSPS---------------DALKVFHRMKLANES--------PNSVT 204
D PS +AL +F RM +A E+ PN VT
Sbjct: 239 GNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRM-IAVEAGAWGQGNRPNQVT 297
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
V +SAC +R G+ IH Y NGL LD + ALV+MY KCG +++A +VF+
Sbjct: 298 AVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTL 357
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQ--TGLKPDSISFSAILSACSHLGLVDEG 322
E++L SW MI+ LA +G+ AIS+F +M+ +G+KPD ++F +L+AC+H GLV++G
Sbjct: 358 ERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKG 417
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
YF+ M + Y I+P +EHYGC+VD+LGRAG EEA ++R M EP+ VI S L C+
Sbjct: 418 WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCK 477
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
HG + ++ K L+ ++P G ++ A++ G WD ++ + ++ +K PG
Sbjct: 478 IHGHTDLAEFSIKK-LIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPG 536
Query: 443 CSWVKVND 450
CSW+++++
Sbjct: 537 CSWIEIDN 544
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 232/389 (59%), Gaps = 3/389 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
+P L ++N +I A A + + E+I F +M+ GL PD+ T+ ++ ACG + + G
Sbjct: 346 SPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQ 404
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACD 181
+HS I K+GLD + N+LL MY C + A VF+++ ++VSW+++++
Sbjct: 405 IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK 464
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
P +A ++F M + P+++T+ +++ C L+++ G +H ++V +GL +DV++
Sbjct: 465 QPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSN 524
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
L++MY+KCG ++ A VF+ + ++ SW+ +I G A G G A++LF M G++P
Sbjct: 525 RLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQP 584
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +++ +LSACSH+GLV+EG + ++ M I PT EH CMVD+L RAG + EA +
Sbjct: 585 NEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF 644
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I+ +P+ + ++ L +C+ HG V + + + +LKL+P A VL +++ + +GN
Sbjct: 645 IKKTGFDPDITMWKTLLASCKTHGNV-DIAERAAENILKLDPSNSAALVLLSNIHASAGN 703
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVND 450
W A L + Q G+ KVPG SW++V D
Sbjct: 704 WKEVARLRNLMKQMGVQKVPGQSWIEVKD 732
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 20/347 (5%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R F+ + + + ++ +I Y++ ++I ++ +ML++G PD T+ ++
Sbjct: 130 SLKDARKAFDTMQLRS-VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSII 188
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC I +GG +H + K G D N L+ MY +I A VF + +D++
Sbjct: 189 KACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLI 248
Query: 169 SWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
SW+SMI GF +AL +F M + PN S+ SAC SL+ G I
Sbjct: 249 SWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGM 308
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYA 287
GL +V G +L +MY+K G + A + F + +L SW +I+ LA N N A
Sbjct: 309 CAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEA 367
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNYFDEMARVYNIKPTM 339
I F +MI GL PD I+F +L AC +++G K D++A V N
Sbjct: 368 IYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCN----- 422
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
++ M + + +A+++ +++ N V + L AC H Q
Sbjct: 423 ----SLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQ 465
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 6/317 (1%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
N+ I K E++ F+ LK + ++ + TY ++ AC + G +H I
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K D + N +L MY C + A+ F+ M +R VVSW+ MI+G+ +DA+
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M + P+ +T S++ AC ++ G +H + + +G + + AL+ MY+
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL-KPDSISFS 307
K G + A VF ++ K+L SW MI+G G A+ LF M + G+ +P+ F
Sbjct: 228 KFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFG 287
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMP 366
++ SAC L L E M + + + GC + DM + G + A +
Sbjct: 288 SVFSACRSL-LKPEFGRQIQGMCAKFGLGRNV-FAGCSLCDMYAKFGFLPSAKRAFYQIE 345
Query: 367 TEPNAVILRSFLGACRN 383
+ P+ V + + A N
Sbjct: 346 S-PDLVSWNAIIAALAN 361
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 34/307 (11%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLI 73
T++ Q+H+ +K LD + + + S LH ++F ++ L ++N ++
Sbjct: 398 TLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAIL 457
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
A ++ E+ +LF ML + +PDN T ++ C + + +G VH K GL
Sbjct: 458 SACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLV 517
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
D + N L+ MYA C + A+ VF+ D+VSWSS+I G+ +AL +F M
Sbjct: 518 VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMM 577
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ PN VT + ++SAC+ + V G +++ +++ LG + C
Sbjct: 578 RNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYN-------TMEIELGIPPTREHVSC--- 627
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
M+ LA G Y F K +TG PD + +L++C
Sbjct: 628 --------------------MVDLLARAG-CLYEAENFIK--KTGFDPDITMWKTLLASC 664
Query: 314 SHLGLVD 320
G VD
Sbjct: 665 KTHGNVD 671
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 234/396 (59%), Gaps = 4/396 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++FN + + ++N ++ +A+ + ++ L +M G P++ T+ V+ AC R
Sbjct: 266 NVFNQIG-EKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARI 324
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +H+ + G D ++ N L MYA C +++A+ VF+ + +RD VS++ +I
Sbjct: 325 GFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILI 383
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+ + S++L++F M + + V+ + ++SAC +L ++ G+ +H AV L
Sbjct: 384 IGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLH 443
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ + AL++ Y KCG ++ A KVF + ++ SW MI G G AI+LF M
Sbjct: 444 THLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G++ DS+S+ A+LSACSH GLV+EGK YF+ M +V NIKPT HY CMVD+LGRAGL
Sbjct: 504 KEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGL 562
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
IEEA +I ++P EP+A + + LGACR HG + L + L KL+P+ Y + ++
Sbjct: 563 IEEAVKLIESLPIEPDANVWGALLGACRIHGYI-ELAHWAAEHLFKLKPQHSGYYSVLSN 621
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +G WD A ++ + +G K PGCSWV++++
Sbjct: 622 MYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDN 657
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 160/278 (57%), Gaps = 3/278 (1%)
Query: 96 GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
G+R D+ T+PFV+KAC L + G +H ++FK+G DSD ++GNTLL Y C +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 156 KAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL-ANESPNSVTLVSLVSACTS 214
K VF+EM RDVVSW+S+I F ++A+ +F M L + PN V++VS++ C
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G IH Y V GL+ V +G ALV++Y KCG+V+ + +VF+ + E+N SW +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I+ LA R A+ +F MI G+KP+S++FS++L L L D GK R +
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR-FG 240
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
++ + ++DM ++G +A ++ N E N V
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVF-NQIGEKNIV 277
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 177/355 (49%), Gaps = 8/355 (2%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNT 71
S +V ++H + K D + + + +L + L + +F+ + + + ++N+
Sbjct: 20 SLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM-LERDVVSWNS 78
Query: 72 LIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I ++ E+I LF EM L++G RP+ + V+ C G +H + K
Sbjct: 79 VIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKT 138
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GLDS +GN L+ +Y C + ++ VF+E+ R+ VSW+++I + DAL++F
Sbjct: 139 GLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMF 198
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M PNSVT S++ L G+ IH +++ GLE D+ + AL++MY+K
Sbjct: 199 RLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKS 258
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G +A VFN + EKN+ SW M++ A N A+ L +M G P+S++F+ +L
Sbjct: 259 GRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVL 318
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIR 363
AC+ +G + GK AR +++ + + DM + G + A + +
Sbjct: 319 PACARIGFLRPGKEIH---ARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK 370
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H +KT LD + + + + + +R +F+ + + ++N +I + A
Sbjct: 129 RQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGV-SWNAIITSLAY 187
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ +++++F M+ G++P++ T+ ++ L G +H + GL+SD ++
Sbjct: 188 LERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFV 247
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ MYA A VF ++ +++VSW++M+A F A+ + +M+ E
Sbjct: 248 ANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PNSVT +++ AC + +R G+ IH+ A+ G +D+ + AL +MY+KCG + A +
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARR 367
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF + + S+ I+I G + + ++ LF +M G+K D +S+ ++SAC++L
Sbjct: 368 VFKISLRDEV-SYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAA 426
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+ +GK R + + + ++D + G I+ A + R +P+ A
Sbjct: 427 LKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTA 478
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 240/429 (55%), Gaps = 44/429 (10%)
Query: 67 FAYNTLIRAYAKTSCS----IESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
F +N LIRA ++ ++ L+ M + PD T+PF++++ G
Sbjct: 25 FVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINT---PHRGRQ 81
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKE------------------------------- 151
+H+ I +GL +D ++ +L+ MY++C
Sbjct: 82 LHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGM 141
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES---PNSVTLVSL 208
I +A+ +F++MP ++V+SWS MI G+V+C AL +F ++ S PN T+ S+
Sbjct: 142 IHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSV 201
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKN 267
+SAC L ++ G+ +H+Y G+++DV LGT+L++MY+KCG +E+A +F NL EK+
Sbjct: 202 LSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKD 261
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
+ +W+ MI+ + +G + LFA+M+ G++P++++F A+L AC H GLV EG YF
Sbjct: 262 VMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFK 321
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
M Y + P ++HYGCMVD+ RAG IE+A++++++MP EP+ +I + L R HG V
Sbjct: 322 RMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDV 381
Query: 388 LYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+ + K LL+L+P + YVL ++V + G W L + +G+ K+PGCS V+
Sbjct: 382 ETCEIAITK-LLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVE 440
Query: 448 VNDGSAEEM 456
V DG E
Sbjct: 441 V-DGVIREF 448
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + +F+NL + A++ +I A++ S E ++LF M+ G+RP+ T+ V+
Sbjct: 245 SIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVL 304
Query: 109 KACGRCLLIGIGGS-VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-D 166
AC L+ G ++ + G+ ++ +Y+ I+ A V + MP+ D
Sbjct: 305 CACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPD 364
Query: 167 VVSWSSMIAG 176
V+ W +++ G
Sbjct: 365 VMIWGALLNG 374
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 259/491 (52%), Gaps = 81/491 (16%)
Query: 34 NTCIISRFILT-SLSI--SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFD 90
N ++ I + SLS+ +L + LF+ +P P + N ++R A++ +++ L+
Sbjct: 9 NLSVVGELIYSASLSVPGALKYAHKLFDEIP-KPDVSICNHVLRGSAQSMKPEKTVSLYT 67
Query: 91 EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK 150
EM K G+ PD +T+ FV+KAC + G + H + + G ++Y+ N L+ +A C
Sbjct: 68 EMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG 127
Query: 151 E-------------------------------IDVAKAVFEEMPV--------------- 164
+ ID A +F+EMP
Sbjct: 128 DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLK 187
Query: 165 ----------------RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
+DVV+W++MI+G+V C P +AL +F M+ A E P+ VT++SL
Sbjct: 188 CKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSL 247
Query: 209 VSACTSLINVRAGESIHSY-----AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
+SAC L ++ G+ +H Y +V + + + + AL++MY+KCG +++A +VF +
Sbjct: 248 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 307
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
++++L +W +I GLA + +I +F +M + + P+ ++F ++ ACSH G VDEG+
Sbjct: 308 KDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 366
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
YF M +YNI+P ++HYGCMVDMLGRAG +EEA+ + +M EPNA++ R+ LGAC+
Sbjct: 367 KYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKI 426
Query: 384 HGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+G V LGK LL + + +YVL +++ + +G WD ++ + + K
Sbjct: 427 YGNV-----ELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKK 481
Query: 440 VPGCSWVKVND 450
G S ++ +D
Sbjct: 482 PTGVSLIEEDD 492
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 229 VVNGLELDVALGTALVEMYSKC----GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
VVNGL ++++ L+ YS G ++ A K+F+ + + ++ ++ G A + +
Sbjct: 2 VVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKP 59
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+SL+ +M + G+ PD +F+ +L ACS L G + ++ R
Sbjct: 60 EKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 106
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 228/402 (56%), Gaps = 13/402 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P T + ++ LI YA+ E++ L +ML+ RP FT+ +KA G
Sbjct: 117 RHVFDGIP-TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGA 175
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
C GIG +H+L K LD D Y+G+ LL MYA C+++D+A VF+ + ++ VSW+++
Sbjct: 176 CGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNAL 235
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAGF L F M+ T S+ SA + + G +H++ + +G
Sbjct: 236 IAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQ 295
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L + ++ MY+K G + A KVF+ + +++L +W M++ A G G A++ F +
Sbjct: 296 KLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEE 355
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + G++ + I+F ++L+ACSH GLV EGK YFD M + YN++P ++HY VD+LGRAG
Sbjct: 356 IRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAG 414
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNH-----GQVLYLDDNLGKLLLKLEPELGAN 408
L++EA + MP EP A + + LGACR H GQ Y D+ + +L+PE
Sbjct: 415 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQ--YAADH----VFELDPEDTGP 468
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL ++ + +G WD AA + + G+ K P CSWV++ +
Sbjct: 469 PVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIEN 510
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 130/238 (54%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
++ D +L L P Y ++ AC + + ++HS + + L D ++ N+L+ M
Sbjct: 47 LRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHM 106
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y C + A+ VF+ +P RDVVSW+ +I G+ D P++AL + M A P+ T
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
S + A + GE +H+ AV L+ DV +G+AL++MY++C ++ A +VF+ +
Sbjct: 167 TSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS 226
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
KN SW +I+G A G G + FA+M + G ++S++ SA + +G +++G+
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGR 284
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P S+++AC N+ +IHS+ + L D L +L+ MY KCG V A
Sbjct: 59 APTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARH 118
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF+ + +++ SWT +I+G A N A+ L M++ +P +F++ L A G
Sbjct: 119 VFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGG 178
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
G+ +A YN+ + ++DM R ++ A +
Sbjct: 179 RGIGEQ-MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVF 221
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 233/384 (60%), Gaps = 3/384 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++N LI YA E++ +F +M + G PD+F+ + AC L+ +G +H
Sbjct: 367 IISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHG 426
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K + D+++ N+L+ MY+ C +D+A +F+ + + VV+W+SMI GF + +
Sbjct: 427 YAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLE 485
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+++F +M L N VT ++ + AC+ + ++ G+ +H + G++ D+ + TAL++
Sbjct: 486 AIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALID 545
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A +VF+ M E+++ SW+ MI G +G + AISLFA+MIQ +KP+ I+
Sbjct: 546 MYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDIT 605
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F ILSACSH G V+EGK YF+ M + + ++P +EH+ CMVD+L RAG ++EAY II +M
Sbjct: 606 FMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSM 664
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
P A I + L CR H Q + + N+ + LL + + Y L +++ + GNWD +
Sbjct: 665 PFPAEASIWGALLNGCRIH-QRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVS 723
Query: 426 AELMVAINQKGLNKVPGCSWVKVN 449
++ A+ GL KVPG S ++++
Sbjct: 724 RKVRSAMKGIGLKKVPGYSTIELD 747
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 162/304 (53%), Gaps = 2/304 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
LH+ L T L H+ ++ I + I L ++ +F P F + LI+ + ++
Sbjct: 20 LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQ-NPDSFMWAVLIKCHVWSN 78
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E+I L+++M+ + +F + V++AC + +G VH I K GLD D +
Sbjct: 79 FCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVET 138
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+LL MY + AK VF+ M RD+VSWSS+I+ +V S+ L++F + +
Sbjct: 139 SLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVEL 198
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+SVT++S+ AC L +R +S+H + +E L ALV MYS+C A ++F
Sbjct: 199 DSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIF 258
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ M +++ SWT MIS + A+ +F +M++ + P++++ A+LS+C+ L+
Sbjct: 259 SNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLR 318
Query: 321 EGKN 324
EGK+
Sbjct: 319 EGKS 322
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 170/316 (53%), Gaps = 3/316 (0%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+ +F+N+ T L +++++I Y S E +++F ++ + D+ T + ACG
Sbjct: 153 AKKVFDNM-TTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACG 211
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + SVH I + +++ + + L+ MY+ C + A+ +F M R + SW++
Sbjct: 212 ELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTA 271
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+ + AL+VF M +PN+VT+++++S+C +R G+S+H YAV +
Sbjct: 272 MISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHI 331
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
D +LG AL+E Y++ G + KV + + ++N+ SW ++IS A G A+ +F
Sbjct: 332 DLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFV 391
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + G PDS S S+ +SAC+++GL+ G + + + +++ ++DM +
Sbjct: 392 QMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQN--SLIDMYSKC 449
Query: 353 GLIEEAYHIIRNMPTE 368
G ++ AY I + ++
Sbjct: 450 GHVDLAYLIFDRIQSK 465
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 226/387 (58%), Gaps = 11/387 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++ +I Y K ++++ + M G+ PD T V+ AC L+ G +H
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ GL S + N+L+ MY+ C+ ID A VF +P ++V+SW+S+I G +
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL F +M L+ + PNSVTLVS++SAC + + G+ IH++A+ GL D L AL++
Sbjct: 482 ALFFFQQMILSLK-PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY +CG +E A+ FN EK++ SW I+++G A G+G A+ LF KMI++ + PD I+
Sbjct: 541 MYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEIT 599
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F+++L ACS G+V +G YF+ M ++I P ++HY +VD+LGRAG +E+AY I+ M
Sbjct: 600 FTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGN 421
P +P+ I + L ACR +Y + LG+L + +++ + Y+L ++ + SG
Sbjct: 660 PIDPDPAIWGALLNACR-----IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGK 714
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
WD A + + + L PGCSWV+V
Sbjct: 715 WDEVARVRKIMRENRLTVDPGCSWVEV 741
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 171/303 (56%), Gaps = 1/303 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF++N L+ YAK E++ L+ ML G+RPD +T+P V++ CG + G VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ + G +SD + N L+ MY C +I A+ VF+ MP RD +SW++MI+G+ D +
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L++F M+ P+ +T+ S++SAC +L + R G +H Y + G +V++ +L++
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+S G ++A VF+ M K+L SWT MISG NG A+ + M G+ PD I+
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+++LSAC+ LGL+D+G E A + + ++DM + I++A + +
Sbjct: 400 IASVLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458
Query: 366 PTE 368
P +
Sbjct: 459 PNK 461
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
HLH + F ++ +D +I+ ++ S R +F+ +P + ++N +I Y
Sbjct: 218 HLHVIRYGF-ESDVDVVNALITMYVKCGDIFS---ARLVFDRMPRRDRI-SWNAMISGYF 272
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ +E ++LF M + + PD T V+ AC +G VH + K G ++
Sbjct: 273 ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L++M+++ D A+ VF +M +D+VSW++MI+G+ P A++ + M+
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG 392
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ +T+ S++SAC L + G +H +A GL V + +L++MYSKC ++KA
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ + KN+ SWT +I GL N R A+ F +MI + LKP+S++ ++LSAC+ +G
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIG 511
Query: 318 LVDEGKN-------------------YFDEMARVYNIKPTMEHY-GCMVDML-------- 349
+ GK D R ++P + C D+
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTG 571
Query: 350 ----GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
G+ GL E +H + P+ + S L AC G V
Sbjct: 572 YAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%)
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
D M + + + TY +++ C G VHS + K +GN LL M+
Sbjct: 82 LDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVR 141
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
++ A VF +M RD+ SW+ ++ G+ +AL ++HRM P+ T +
Sbjct: 142 FGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCV 201
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+ C L ++ G +H + + G E DV + AL+ MY KCG + A VF+ M ++
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
SW MISG +N + LF M + + PD ++ ++++SAC LG
Sbjct: 262 ISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T ++L+ C G +HSY L V LG AL+ M+ + G + +A+ VF M
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
E++L SW +++ G A G + A++L+ +M+ G++PD +F +L C L + G+
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R Y + ++ ++ M + G I A + MP
Sbjct: 216 EVHLHVIR-YGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 243/452 (53%), Gaps = 13/452 (2%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTP 64
+L Q + +H LF+ L N IS+ F S S SL + +F+ + P
Sbjct: 9 SLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQ-NP 67
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
LFAYNTLIRAY+++S ++ F ML + PD T+PF++ AC L + +G +
Sbjct: 68 NLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQI 127
Query: 124 HSLIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
H+ + K G+ SD+++ L+R YA C + A+ +F+E+P DVV W+ ++ G+V
Sbjct: 128 HNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGL 187
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGT 241
+AL F M ++ P+ L + + C L ++ G+ IH Y LE DV +GT
Sbjct: 188 APEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGT 247
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLK 300
ALV+MY+KCG ++++ +VF M ++N+ SW+ MI G A +G A+ +M ++ GL+
Sbjct: 248 ALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLR 307
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD + ++ AC+H GL +EG+ + M Y I P EHY CMVD+L RAG ++EA
Sbjct: 308 PDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALK 367
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL----KLEPELGANYVLAASVS 416
+IR MP +P A + + L CR H V + +LL+ E GA YV +++
Sbjct: 368 LIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGA-YVQLSNIY 426
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+ + A + I K + PGCS ++V
Sbjct: 427 LAAQKCEDACRIRRMIGDKRIKTKPGCSLIEV 458
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM--YSKCGHVEKAFKVFNLM 263
+SL +C+ N+R ++IH+ +VNGL L+ + L+ S G + A +F+ +
Sbjct: 8 ISLAQSCS---NMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHL------ 316
+ NL ++ +I + + A+ F M+ + PD +F I+SAC++
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 317 ----------GLVDEGKNYFDEMARVY-------------NIKPTME--HYGCMVDMLGR 351
G+ ++ + R Y + P ++ + +++ R
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVR 184
Query: 352 AGLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHG 385
GL EA + RNM EP+ L + L C G
Sbjct: 185 RGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLG 221
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 226/387 (58%), Gaps = 11/387 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++ +I Y K ++++ + M G+ PD T V+ AC L+ G +H
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ GL S + N+L+ MY+ C+ ID A VF +P ++V+SW+S+I G +
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL F +M L+ + PNSVTLVS++SAC + + G+ IH++A+ GL D L AL++
Sbjct: 482 ALFFFQQMILSLK-PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY +CG +E A+ FN EK++ SW I+++G A G+G A+ LF KMI++ + PD I+
Sbjct: 541 MYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEIT 599
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F+++L ACS G+V +G YF+ M ++I P ++HY +VD+LGRAG +E+AY I+ M
Sbjct: 600 FTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGN 421
P +P+ I + L ACR +Y + LG+L + +++ + Y+L ++ + SG
Sbjct: 660 PIDPDPAIWGALLNACR-----IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGK 714
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKV 448
WD A + + + L PGCSWV+V
Sbjct: 715 WDEVARVRKIMRENRLTVDPGCSWVEV 741
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 171/303 (56%), Gaps = 1/303 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF++N L+ YAK E++ L+ ML G+RPD +T+P V++ CG + G VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ + G +SD + N L+ MY C +I A+ VF+ MP RD +SW++MI+G+ D +
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
L++F M+ P+ +T+ S++SAC +L + R G +H Y + G +V++ +L++
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+S G ++A VF+ M K+L SWT MISG NG A+ + M G+ PD I+
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+++LSAC+ LGL+D+G E A + + ++DM + I++A + +
Sbjct: 400 IASVLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458
Query: 366 PTE 368
P +
Sbjct: 459 PNK 461
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
HLH + F ++ +D +I+ ++ S R +F+ +P + ++N +I Y
Sbjct: 218 HLHVIRYGF-ESDVDVVNALITMYVKCGDIFS---ARLVFDRMPRRDRI-SWNAMISGYF 272
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ +E ++LF M + + PD T V+ AC +G VH + K G ++
Sbjct: 273 ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N+L++M+++ D A+ VF +M +D+VSW++MI+G+ P A++ + M+
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG 392
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ +T+ S++SAC L + G +H +A GL V + +L++MYSKC ++KA
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+VF+ + KN+ SWT +I GL N R A+ F +MI + LKP+S++ ++LSAC+ +G
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIG 511
Query: 318 LVDEGKN-------------------YFDEMARVYNIKPTMEHY-GCMVDML-------- 349
+ GK D R ++P + C D+
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTG 571
Query: 350 ----GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
G+ GL E +H + P+ + S L AC G V
Sbjct: 572 YAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%)
Query: 89 FDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA 148
D M + + + TY +++ C G VHS + K +GN LL M+
Sbjct: 82 LDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVR 141
Query: 149 CKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSL 208
++ A VF +M RD+ SW+ ++ G+ +AL ++HRM P+ T +
Sbjct: 142 FGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCV 201
Query: 209 VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNL 268
+ C L ++ G +H + + G E DV + AL+ MY KCG + A VF+ M ++
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261
Query: 269 QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
SW MISG +N + LF M + + PD ++ ++++SAC LG
Sbjct: 262 ISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
T ++L+ C G +HSY L V LG AL+ M+ + G + +A+ VF M
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
E++L SW +++ G A G + A++L+ +M+ G++PD +F +L C L + G+
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ R Y + ++ ++ M + G I A + MP
Sbjct: 216 EVHLHVIR-YGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 232/396 (58%), Gaps = 4/396 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++F+NL + ++N +I YA +E+I+ +M +TG P+ T+ V+ AC R
Sbjct: 269 TIFHNLD-RRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARL 327
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+G G +H++ ++GL SD ++ N+L+ MYA C + A+ VF +D VS++ +I
Sbjct: 328 GFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILI 386
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+ D +L +F M+L + P+ V+ V ++SAC +L ++ G+ +H A+ N L
Sbjct: 387 IGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLY 446
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ + +L++ Y+KCG ++ A ++FN + K++ SW MI G G AIS+F M
Sbjct: 447 SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM 506
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
++ D +S+ A+LSACSH GLV+ G YF EM ++PT HY CMVD+LGRAG
Sbjct: 507 RDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYTCMVDLLGRAGF 565
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
+EEA +I+ +P P+A I + LGACR +G V L + L +L+P+ Y+L ++
Sbjct: 566 VEEAAKLIQQLPIAPDANIWGALLGACRIYGNV-ELGRRAAEHLFELKPQHCGYYILLSN 624
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + +G WD A ++ + +G K PGCSWV++ D
Sbjct: 625 IYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYD 660
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 151/275 (54%), Gaps = 2/275 (0%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M++ G++ D+ T+PFV+K C I G VH ++FK+G D+D Y+GNTLL +Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVS 210
++ A+ +F+EMP RDVVSW+++I ++A + M L + PN V+++SL+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
+L + IH Y+V GL+ V ALV+ Y KCG V+ ++VFN EKN S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W +I+GLA GR A++ F MI G +P+S++ S+IL L GK
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + + ++DM ++G EA I N+
Sbjct: 241 RM-GTETDIFIANSLIDMYAKSGHSTEASTIFHNL 274
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%), Gaps = 1/256 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A +++ F M+ G +P++ T ++ G +H
Sbjct: 180 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
++G ++D +I N+L+ MYA A +F + R++VSW++MIA + P +A+
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 299
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ +M+ E PN+VT +++ AC L + G+ IH+ V GL D+ + +L++MY
Sbjct: 300 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 359
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+KCG + A VFN R K+ S+ I+I G ++ +++LF++M G KPD +SF
Sbjct: 360 AKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 418
Query: 308 AILSACSHLGLVDEGK 323
++SAC++L + +GK
Sbjct: 419 GVISACANLAALKQGK 434
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 164/344 (47%), Gaps = 4/344 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H + K D + + + ++ + L+ R LF+ +P + ++NT+I +
Sbjct: 31 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVVSWNTIIGLLSVN 89
Query: 80 SCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+ + M L++ ++P+ + ++ + +H KVGLDS
Sbjct: 90 GDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTT 149
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L+ Y C + VF E ++ VSW+S+I G DAL F M A
Sbjct: 150 CNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGA 209
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PNSVT+ S++ L +AG+ IH +++ G E D+ + +L++MY+K GH +A
Sbjct: 210 QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAST 269
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F+ + +N+ SW MI+ A N AI +M +TG P++++F+ +L AC+ LG
Sbjct: 270 IFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGF 329
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ GK R+ + + ++DM + G + A ++
Sbjct: 330 LGPGKEIHAMGVRI-GLTSDLFVSNSLIDMYAKCGCLHSARNVF 372
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 232/427 (54%), Gaps = 33/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ L YNT++ Y + + + + DEML+ G RPD T + AC +
Sbjct: 286 RQIFDEC-ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQ 344
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMY-------AACK---------------- 150
+ +G S H+ + + GL+ I N ++ MY AACK
Sbjct: 345 LGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSL 404
Query: 151 --------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
++++A +F+EM RD+VSW++MI V +A+++F M+ +
Sbjct: 405 IAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDR 464
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
VT+V + SAC L + + + +Y N + +D+ LGTALV+M+S+CG A VF
Sbjct: 465 VTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKR 524
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M ++++ +WT I +A G AI LF +M++ +KPD + F A+L+ACSH G VD+G
Sbjct: 525 MEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQG 584
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
+ F M + + I+P + HYGCMVD+LGRAGL+EEA +I++MP EPN V+ S L ACR
Sbjct: 585 RQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACR 644
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
H V L + L +L PE +VL +++ + +G W A + + + +KG+ KVPG
Sbjct: 645 KHKNV-ELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPG 703
Query: 443 CSWVKVN 449
S ++V
Sbjct: 704 SSSIEVQ 710
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 200/366 (54%), Gaps = 16/366 (4%)
Query: 14 KTVHHLHQLHTLFLKTSL--DHNTCIISRFILTSLSI----SLHFTRSLF-NNLPVTPPL 66
KT+ L QLH +K L +++ I +S+ I SL + R+ F ++ L
Sbjct: 36 KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASL 95
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
F YN LIR YA ++I L+ +ML G+ PD +T+PF++ AC + L + G VH
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGA 155
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K+GL+ D ++ N+L+ YA C ++D+ + +F+ M R+VVSW+S+I G+ D +A
Sbjct: 156 VLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEA 215
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F +M A PN VT+V ++SAC L ++ G+ + SY G+EL + ALV+M
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDM 275
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y KCG + A ++F+ KNL + ++S + + + + +M+Q G +PD ++
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTM 335
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHII 362
+ ++AC+ LG + GK+ + Y ++ +E + ++DM + G E A +
Sbjct: 336 LSTIAACAQLGDLSVGKS-----SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 363 RNMPTE 368
+MP +
Sbjct: 391 EHMPNK 396
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 182/380 (47%), Gaps = 40/380 (10%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H LK L+ + + + I + + R LF+ + + + ++ +LI Y+
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM-LERNVVSWTSLINGYSGR 209
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S E++ LF +M + G+ P+ T V+ AC + + +G V S I ++G++ +
Sbjct: 210 DLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MY C +I A+ +F+E +++V ++++++ +V + SD L + M
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH------- 252
P+ VT++S ++AC L ++ G+S H+Y + NGLE + A+++MY KCG
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389
Query: 253 ------------------------VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+E A+++F+ M E++L SW MI L AI
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEMARVYNIKPTMEHYGCM 345
LF +M G+ D ++ I SAC +LG +D K Y ++ +I ++ +
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEK----NDIHVDLQLGTAL 505
Query: 346 VDMLGRAGLIEEAYHIIRNM 365
VDM R G A H+ + M
Sbjct: 506 VDMFSRCGDPSSAMHVFKRM 525
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 238/404 (58%), Gaps = 23/404 (5%)
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLI- 117
L P F+YNT IR+ A ++ L+ ML L P+N+TYP ++ AC R L
Sbjct: 51 LQAHPTTFSYNTTIRSLAHGPRPHLAVALYRSMLLNPLSNPNNYTYPPLLAACARLLPAH 110
Query: 118 -----GIGGSVHSLIFKVGLDS-DKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RDVVS 169
G +VH+ +F+ GL+S D++I ++L YAA ++ A+ VF+ P RD+
Sbjct: 111 PPREAAAGTAVHASLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPPNQRDLAL 170
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+S++ +++ + L++F +M +E VTL+++VSAC+ L + G H+Y
Sbjct: 171 WNSLLHAYLSQGLYTHVLRLFRQMVATDE----VTLLAVVSACSHLGALDTGRWAHAYHA 226
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
LGTAL+ MY +CG VE A+ VF+ M +K++++W++MI+GLA NG A+
Sbjct: 227 RTCRNTTRNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALK 286
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LFA+M G+ PDSI+ +A+LSACSH G+VDEGK + M Y+++PT+EHYGC+VD+L
Sbjct: 287 LFAEMKNIGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLL 346
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPEL 405
GRAG +EEA +I +P + + + + L ACR H V ++G++ +LKL+P
Sbjct: 347 GRAGQLEEALALIETVPFKADVALWGALLVACRAHKNV-----DMGQMAAMEILKLDPHH 401
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
V ++ + +G WD E+ ++ + + K PG S V+++
Sbjct: 402 AGACVFLSNAYAAAGKWDLVQEVRSSMKEHRIYKPPGSSIVELD 445
>gi|357508535|ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499571|gb|AES80774.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 476
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 207/388 (53%), Gaps = 34/388 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLP 61
S +Q L Q+H ++ L H+ +I + S S + + +F+ L
Sbjct: 20 SEEARLFLQNCNNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLN 79
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
P +F +N +IRAY + +SI LF +M+ G PD FTYPFV+ AC +I G
Sbjct: 80 -DPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGR 138
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMY--------------------------------AAC 149
H L K+G SD Y+ N ++ +Y AC
Sbjct: 139 LTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVAC 198
Query: 150 KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV 209
++D A+ VFE +P ++VVSW++MI G+V D+P A +F RM + N PN TLVSL+
Sbjct: 199 GKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLI 258
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
ACT L +++ G +H +A+ NG EL LGTALV+MYSKCG ++ A KVF LM +NL
Sbjct: 259 KACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLA 318
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
+W M++ +G GN + LF +M + G+ PD+I+F +LSAC + ++ G+ YF M
Sbjct: 319 TWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDLELGQKYFSLM 378
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
Y++ P +EHY CMV + RA + E
Sbjct: 379 TEHYSLTPILEHYTCMVGLYTRANELNE 406
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 255/481 (53%), Gaps = 45/481 (9%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTP 64
H L+ K ++ L Q+H + + H+ I L SL RS+F++ P P
Sbjct: 54 HYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTP-NP 112
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
+N++IRAY ++ E+++++ M+ K GL D F +V + + V
Sbjct: 113 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREV 172
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV--AC- 180
+ K D N ++ + ++ VA+ VF++M +D VSW +M+AG+ C
Sbjct: 173 FDKMPK----RDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCF 228
Query: 181 ---------------------------DSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
+A+ FH+M+L N PNSVT VS++ A
Sbjct: 229 VEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 288
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
L R G + H+ + G + +G +L++MY+KCG ++ + K+FN M K+ SW
Sbjct: 289 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNA 348
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
M+SG A +G G+ AI+LF+ M ++ ++ DS+SF ++LSAC H GLV+EG+ F M+ Y
Sbjct: 349 MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKY 408
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDN 393
+IKP +EHY CMVD+LGRAGL +E I+ MP EP+A + + LG+CR H V
Sbjct: 409 HIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV-----K 463
Query: 394 LGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LG++ L+KLEP A++V+ +S+ + SG W A + +N GL K PGCSWV++
Sbjct: 464 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 523
Query: 450 D 450
+
Sbjct: 524 N 524
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 252/441 (57%), Gaps = 5/441 (1%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
+ + ++HT +KT + + +R I L + L R +F+ +P + ++
Sbjct: 103 QRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP-QKNVVSWTA 161
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I AY++ + E++ LF EML++ P++FT+ ++ +C L G +HS+ K
Sbjct: 162 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+S ++G++LL MYA I A VF +P RDVV+ +++I+G+ +ALK+F
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
++++ + NSVT S+++A + L + G+ +HS+ + +G V L +L++MYSKCG
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAIL 310
+V A ++F+ M E+ SW M+ G + +G + LF M + +KPDSI++ A+L
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401
Query: 311 SACSHLGLVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
S CSH L D G F M + I+P + HYGC+VD+LGRAG +EEA+ I+ MP P
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
A I S LG+CR H V + +G+ LL+LEPE NYV+ +++ + +G W+ +
Sbjct: 462 TAAIWGSLLGSCRVHSDV-EIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIR 520
Query: 430 VAINQKGLNKVPGCSWVKVND 450
+ +K + K PG SWV+++
Sbjct: 521 DLMQEKAVTKEPGRSWVELDQ 541
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 155/311 (49%), Gaps = 7/311 (2%)
Query: 78 KTSCSIESIKLFDEMLKTGL--RPDNFT-YPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
KT CS S +L + +L+ + R F Y ++ C I G VH+ + K
Sbjct: 66 KTLCS--SGQLKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLP 123
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
Y+ L+ +Y C + A+ +F+EMP ++VVSW++MI+ + +AL +F M
Sbjct: 124 SVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEML 183
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
++ PN T +++++C + G IHS A+ E + +G++L++MY+K G +
Sbjct: 184 RSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC 243
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A VF+ + E+++ + T +ISG A G A+ LF ++ G+ +S++++++L+A S
Sbjct: 244 DAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS 303
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
L ++ GK + R + ++DM + G + A I +MP E +
Sbjct: 304 GLAALNHGKQVHSHVLRSGQYSYVV-LLNSLIDMYSKCGNVCYARRIFDSMP-ERTCISW 361
Query: 375 RSFLGACRNHG 385
+ L HG
Sbjct: 362 NAMLVGYSKHG 372
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 267/513 (52%), Gaps = 68/513 (13%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFA 68
I+ T++ LH L +KT+ + ++ +FI S ++ S+H+ F + P +F
Sbjct: 46 IKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQME-NPNVFV 104
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
YN +I+ + +++ + ML+ + + P ++T+ +VKAC + +G VH I
Sbjct: 105 YNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHI 164
Query: 128 FKVGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAK 156
+K G +S ++ L+ Y A ++D A+
Sbjct: 165 WKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSAR 224
Query: 157 AVFEEMPVRDVVSWSSMIAGF---------------------------VACDSPS----D 185
+FEEMP R+ +W++MI G+ + C S + D
Sbjct: 225 KLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQD 284
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL ++ M+L P+ VT+ ++ SAC + + G+ IH Y + GL LDV +G+ALV+
Sbjct: 285 ALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVD 344
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG ++ + +F + +KNL W +I GLA +G A+ +FA M + + P+ ++
Sbjct: 345 MYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVT 404
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +ILSAC+H GLVDEG++ F M R Y+I+P + HYGCMVDML ++G + EA +I++M
Sbjct: 405 FISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM 464
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
EPN++I + L C+ HG +D + +L++ LEP +Y L S+ + +W
Sbjct: 465 EFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMI-LEPMNSGHYNLLVSMYAEEKDWMEV 523
Query: 426 AELMVAINQKGL-NKVPGCSWVKVNDGSAEEMS 457
A + + +KG+ K PG SW+++ +G+ + S
Sbjct: 524 AHIRSMMKEKGVEKKYPGSSWIEL-EGTIHQFS 555
>gi|125605677|gb|EAZ44713.1| hypothetical protein OsJ_29343 [Oryza sativa Japonica Group]
Length = 505
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 214/386 (55%), Gaps = 5/386 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL--IGIGGSVHSL 126
+N L+ A + + LF + + GLRPD T P V+KA R + + GSVHS
Sbjct: 74 FNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSE 133
Query: 127 IFKVGLDSDK-YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K GL S Y+ N L+ Y+AC +++ A VF+EMP R VVSW++ +
Sbjct: 134 AVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHEL 193
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+++F M A P+ T V ++SA L N+ G+ H V L++ + LGTA V
Sbjct: 194 CVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVN 253
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKC V A ++F M +N+ +WT MI G A NG A+ LF +M + + P+ ++
Sbjct: 254 MYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVT 313
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +L ACSH GLVDEG+ +F EM VY I P M HY MVD+LGR GL++EAY + M
Sbjct: 314 FLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGM 373
Query: 366 PTEPNAVILRSFLGACRNHG--QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
P E + V+ R+ L AC+ H + + D + LL+LEP NYV+ +++ G+WD
Sbjct: 374 PVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWD 433
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
AA+ + + G+ KV G S V+V
Sbjct: 434 EAAKARRVMREGGMKKVAGESCVEVG 459
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 252/439 (57%), Gaps = 3/439 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTP-PLFAYN 70
+K++ L +H + ++T LD +T + + +I S L + +F+ + T ++N
Sbjct: 166 AKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWN 225
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+LI YA ++++K + +L G +PD T ++ +C + + G +H F++
Sbjct: 226 SLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQL 285
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G DSD + NTL+ MY+ C +I A +F+ M +R VSW++MI+G+ DAL +F
Sbjct: 286 GCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLF 345
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ M+ E P+ VT++SL+S C + G I +YA ++ L+ DV + AL++MY+KC
Sbjct: 346 NAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKC 405
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G + A ++F + + + SWT MI+ A NG A+ LF+ + ++G++P++I+F A+L
Sbjct: 406 GSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVL 465
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
AC H G +++G+ F M Y I P ++HY CM+D+LGR G + EA +I++MP +P+
Sbjct: 466 QACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPD 525
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMV 430
I + LGAC+ H + + + + + L +L+P + ++V A++ + G WD A +
Sbjct: 526 EGIWGALLGACKIHNN-MEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRK 584
Query: 431 AINQKGLNKVPGCSWVKVN 449
+ + K PG S V+VN
Sbjct: 585 TMRSNQMRKSPGKSVVQVN 603
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 138/249 (55%), Gaps = 2/249 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N+ IR + +++ LF ++ GL+P+NFT+PF+ KAC + + +H+ +
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K SD Y+ ++ MY C ++D A +F++MPVR++ SW++MI GF S
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F M+L P++ T++ L A S ++R +++H+ + GL+ D ++ + YS
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 249 KCGHVEKAFKVFNLMRE--KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
KCG ++ A VF+ +++ ++ SW +I+ A G+ A+ + ++ G KPD+ +
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 307 SAILSACSH 315
++LS+C
Sbjct: 260 ISLLSSCQQ 268
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L W I G + G + A++LF ++ GL+P++ +F + AC+ L + +
Sbjct: 17 LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHT 76
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+ + + MVDM + G +++AY++ MP
Sbjct: 77 HVVKS-PFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR 116
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 228/389 (58%), Gaps = 9/389 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+ +LI + E+++LF +M G+ P+ T + A RC I G VH +
Sbjct: 173 AWTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRL 232
Query: 128 FKVGLDS-------DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
++G D + + ++ MYA C ++ A+ +F++MP R++V W+SMI+ +
Sbjct: 233 RQLGFDPFDTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQY 292
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
++AL++F M++A PN T +S++SACT + G S+H+ A+ VA+G
Sbjct: 293 GRGAEALRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIG 352
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-L 299
TAL++MY+K G + A K+F+ +R+K++ +WT MISGLA G+G A+++F +M + +
Sbjct: 353 TALMDMYAKAGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEV 412
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
PD I++ A+L ACSHLGLV+EG+ F M VY I+PTMEHYGCM+D+L RAG +EA
Sbjct: 413 APDQITYIAVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAE 472
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ MPT+PNA IL S L C +G V L + + +++LE YVL +++ + +
Sbjct: 473 ELLMKMPTQPNATILSSILNGCEMYGNV-GLANRVKSHIVELENSSSGVYVLLSNIHAKA 531
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKV 448
NW + K + K G S+V++
Sbjct: 532 CNWQEMKLARDMLKHKNIGKTLGNSFVEI 560
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 197/370 (53%), Gaps = 12/370 (3%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPV 62
+ + ++ KT+ L Q+H+L + TS+ N SR F S + + R++F+ +
Sbjct: 8 VMSFLEKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQIN- 66
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
++ +N++I+ Y ++ +++EM + G PD+FT+PFV+K C L+ G S
Sbjct: 67 QRTVYIWNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVYGQS 126
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH+ I K G + D Y + LL MY +C +++ VFE +P +VV+W+S+IAGFV D
Sbjct: 127 VHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQ 186
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE-------L 235
P +AL++F M+ PN +T+ + ++A ++ G+ +H G +
Sbjct: 187 PKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNSCF 246
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+V L TA+++MY+KCG + A +F+ M ++NL W MIS + GRG A+ LF M
Sbjct: 247 NVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDME 306
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
G P+ +F +++SAC+H+G G++ R + + ++DM +AG
Sbjct: 307 MAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRA-SFHEFVAIGTALMDMYAKAGDA 365
Query: 356 EEAYHIIRNM 365
+ A I +
Sbjct: 366 DTALKIFSKL 375
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 242/445 (54%), Gaps = 20/445 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L K L+ + + S + T L + +F LPV + +N ++ +A+
Sbjct: 153 KIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVL-WNAMVNGFAQI 211
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ +F M G+ P +T V+ G +VH + K+G +S +
Sbjct: 212 GRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVS 271
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE- 198
N L+ MY CK + A +VFE M D+ SW+S+++ C L++F RM ++
Sbjct: 272 NALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRV 331
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL--------DVALGTALVEMYSKC 250
P+ VT+ +++ ACT L + G IH Y VVNGL DV L AL++MY+KC
Sbjct: 332 QPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKC 391
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G++ A VF MREK++ SW IMI+G +G G A+ +F++M Q + P+ ISF +L
Sbjct: 392 GNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLL 451
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
SACSH G+V EG + EM Y + P++EHY C++DML RAG + EAY ++ MP + +
Sbjct: 452 SACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKAD 511
Query: 371 AVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAA 426
V RS L ACR H D +L ++ +++LEP+ NYVL ++V + G ++
Sbjct: 512 PVGWRSLLAACRLHN-----DTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVL 566
Query: 427 ELMVAINQKGLNKVPGCSWVKVNDG 451
E + Q+ + K PGCSW+++ +G
Sbjct: 567 EWRYTMKQQNVKKRPGCSWIELVNG 591
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 177/357 (49%), Gaps = 14/357 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPV--TPPLFAYNTLIRAY 76
+LHT LK + + I+ I + S+ H R N P +FAYN LI +
Sbjct: 50 ELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF--NFPTHHNKNVFAYNALIAGF 107
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ ++ L+++M G+ PD FT+P V++ACG + +H L+FKVGL+ D
Sbjct: 108 LANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDV 167
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++G+ L+ Y + + A VFEE+PVRDVV W++M+ GF +AL VF RM
Sbjct: 168 FVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGN 227
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
P T+ ++S + + + G ++H + G E V + AL++MY KC V A
Sbjct: 228 GVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDA 287
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSH 315
VF +M E ++ SW ++S G + LF +M+ + ++PD ++ + +L AC+H
Sbjct: 288 LSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTH 347
Query: 316 LGLVDEGKNYFDEMA-------RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
L + G+ M +++ + ++DM + G + +A + NM
Sbjct: 348 LAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNM 404
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--- 164
+++C + G +H+ + K +L+ MY+ C ID + VF P
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF-NFPTHHN 94
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
++V +++++IAGF+A P AL ++++M+ +P+ T ++ AC + I
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKI 154
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H GLELDV +G+ALV Y K V +A++VF + +++ W M++G A GR
Sbjct: 155 HGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRF 214
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
A+ +F +M G+ P + + +LS S +G D G+
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGR 253
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL- 262
T ++ + +C N+ G+ +H++ + N T+L+ MYSKC ++ + +VFN
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 263 -MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
KN+ ++ +I+G N A++L+ +M G+ PD +F ++ AC G D+
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GDDDD 147
Query: 322 GKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTE 368
G ++ + ++ + +V+ + + EAY + +P
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR 196
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 232/430 (53%), Gaps = 3/430 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H +KTS N + + F+ S ++ R LFN +P + +YN +I AYA
Sbjct: 261 QQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGV-SYNVIITAYAW 319
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
ESI LF E+ T NF +P ++ L + +G +H+ + D D +
Sbjct: 320 VGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRV 379
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N+L+ MYA C + + A +F + R V W++MI+ V + LK+F+ M+ AN
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
S + T ++ A +L ++ G+ +HS + +G ++V G AL++MY+ C ++ A K
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIK 498
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
F M E+N+ +W ++S A NG G + F +MI +G +PDS+SF IL+ACSH L
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRL 558
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+EG YF++M+ VYN+ P EHY MVD L R+G +EA ++ MP EP+ ++ S L
Sbjct: 559 VEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
+CR H G+L A YV +++ + +G WD+ ++ A+ +G+
Sbjct: 619 NSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVR 678
Query: 439 KVPGCSWVKV 448
K+P SWV++
Sbjct: 679 KLPAYSWVEI 688
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 172/375 (45%), Gaps = 17/375 (4%)
Query: 18 HLHQLHTLFLKTS--LDHNTC--IISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
L+Q H +K L+H C ++ + T L R LF + + ++N +I
Sbjct: 158 ELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTG---GLDSARRLFLEMCGWDSV-SFNVMI 213
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
YA + E+I+LF EM G +P +FT+ V+ A G +H + K
Sbjct: 214 TGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFI 273
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ ++GN L Y+ ++ + +F EMP D VS++ +I + +++ +F +
Sbjct: 274 RNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQEL 333
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ + +++S S ++++ G +H+ VV+ + D + +LV+MY+KCG
Sbjct: 334 QFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKF 393
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
E+A ++F + ++ WT MIS G + LF +M + + D +F+ +L A
Sbjct: 394 EEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKAS 453
Query: 314 SHLGLVDEGKNYFDEMAR--VYNIKPTMEHYGC-MVDMLGRAGLIEEAYHIIRNMPTEPN 370
++L + GK + R N+ + GC ++DM I++A M +E N
Sbjct: 454 ANLASILLGKQLHSCVIRSGFMNV-----YSGCALLDMYANCASIKDAIKTFEEM-SERN 507
Query: 371 AVILRSFLGACRNHG 385
V + L A +G
Sbjct: 508 VVTWNALLSAYAQNG 522
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
PP F N L + +S + ++KTG P + F++K G
Sbjct: 6 PPPFRANQLKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSE---RGQLCQA 62
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
L+ ++ + + + + ++ Y + VA+ +F++ R VV+W++MI + +
Sbjct: 63 RQLLDQMP-NRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRF 121
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
DA K+F M + P+ VT ++L++ C L + H+ V G L+ + L
Sbjct: 122 GDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTL 181
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++ Y K G ++ A ++F M + S+ +MI+G A+NG AI LF +M G KP
Sbjct: 182 LDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSD 241
Query: 304 ISFSAILSACSHLGLVD 320
+F+A++SA +GL D
Sbjct: 242 FTFAAVISAS--VGLDD 256
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
N +D+ ++ Y K G++ A ++F+ E+ + +WT MI + + R A L
Sbjct: 73 NSFSIDI-----IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKL 127
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC--MVDM 348
FA+M ++G +PD +++ +L+ C+ L + K + A++ + + H C ++D
Sbjct: 128 FAEMHRSGSQPDYVTYITLLTGCNDLEV---AKELYQAHAQIVKLGHHLNHRVCNTLLDS 184
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG-- 406
+ G ++ A + M ++V + N+G L++ +L ++++ LG
Sbjct: 185 YFKTGGLDSARRLFLEM-CGWDSVSFNVMITGYANNG----LNEEAIELFVEMQ-NLGFK 238
Query: 407 -ANYVLAASVSSLSGNWDTA 425
+++ AA +S+ G DTA
Sbjct: 239 PSDFTFAAVISASVGLDDTA 258
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 253/468 (54%), Gaps = 42/468 (8%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
Q+ + L L +F+ SL H L + +L + RS+F+ + V + ++N
Sbjct: 108 QMHNHITKLGLLSDIFVSNSLIH---------LYAACGNLCYARSVFDEM-VVKDVVSWN 157
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+LI Y++ + + + LF M G++ D T VV AC R + + I
Sbjct: 158 SLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDY 217
Query: 131 GLDSDKYIGNTL-------------------------------LRMYAACKEIDVAKAVF 159
++ D Y+GNTL + YA ++I A+ +F
Sbjct: 218 CIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIF 277
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+++P +D++SWSSMI+G+ + SDAL++F +M+ A P+++ + S+VS+C L +
Sbjct: 278 DQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALD 337
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G+ +H Y N ++ D + +L++MY KCG ++A +VF M+EK+ SW +I GLA
Sbjct: 338 LGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLA 397
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+NG +++LF M+ G +P+ ++F +L AC++ LV+EG ++F+ M R+Y+++P M
Sbjct: 398 NNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQM 457
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+HYGC+VD+LGRAG +E+A I MP +P+ V+ R LG+C HG V + + + K L
Sbjct: 458 KHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVA-IAEIVTKKLN 516
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+LEP NY L ++ + + W A + + + K PGCS V+
Sbjct: 517 ELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 210/401 (52%), Gaps = 38/401 (9%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ +LH ++ + L + +S+ +L S +I L F +F+ + P F +N LIR
Sbjct: 4 IKRLHAYYIVSGLYNCHYAMSK-VLRSYAILQPDLVFAHKVFDQIE-APTTFLWNILIRG 61
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
A++ ++I + + G+ PDN T+PF++KAC R + G +H+ I K+GL SD
Sbjct: 62 LAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSD 121
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ N+L+ +YAAC + A++VF+EM V+DVVSW+S+I G+ C+ D L +F M+
Sbjct: 122 IFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQN 181
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ VT++ +VSACT L + + + Y +E+DV LG LV+ + + G ++
Sbjct: 182 EGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQS 241
Query: 256 AFKVFNLMR-------------------------------EKNLQSWTIMISGLADNGRG 284
A KVF M+ +K+L SW+ MISG +
Sbjct: 242 AEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHF 301
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
+ A+ +F +M + +KPD+I ++++S+C+HLG +D GK + E R NIK
Sbjct: 302 SDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGK-WVHEYVRRNNIKADTIMENS 360
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++DM + G +EA + + M E + + S + N+G
Sbjct: 361 LIDMYMKCGSAKEALQVFKEM-KEKDTLSWNSIIIGLANNG 400
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 230/390 (58%), Gaps = 9/390 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+ +LI + E+++LF +M G+ P+ T + A RC I G V +
Sbjct: 173 AWTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRL 232
Query: 128 FKVGLDS-------DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
++GLD + + ++ MYA C ++ A+ +F++MP R++V W+SMI+ F
Sbjct: 233 RQLGLDPFHTNSRFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQY 292
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
++AL++F M+LA PN T +S++ ACT L G+S+H+ + VA+G
Sbjct: 293 GRGAEALRLFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIG 352
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-L 299
TAL++MY+K G + A K+F+ +R+K++ +WT MISGLA G+G A+++F +M + +
Sbjct: 353 TALMDMYAKSGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEV 412
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
PD I++ A+L ACSHLGLV+EG+ +F M VY I+PTMEHYGCM+D+L RAG EEA
Sbjct: 413 APDQITYIAVLWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAE 472
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ MPT+PNA IL S L C +G V L + + +++L+ YVL +++ + +
Sbjct: 473 ELLVKMPTQPNATILSSILNGCEMYGNV-GLANRVKSHIVELKNSSSGVYVLLSNIHAKA 531
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
NW+ + K + K G S+V++N
Sbjct: 532 CNWEEMKLARDILKHKKIGKTLGNSFVEMN 561
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 235/473 (49%), Gaps = 48/473 (10%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPV 62
I + ++ KT+ L Q+H+L +KTS+ N SR F S + + R++F+
Sbjct: 8 ILSFLEKCKTMKELKQIHSLMIKTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQTD- 66
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
++ +N++I+ Y ++ +++EM + G PD+FT+PFV+K C L+ G S
Sbjct: 67 QLTVYVWNSMIKGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQS 126
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
VH+ I K G + D Y + LL MY +C +++ VFE +P +VV+W+S+IAGFV D
Sbjct: 127 VHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQ 186
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE-------L 235
P +AL++F M+ PN +T+ + ++A ++ G+ + GL+
Sbjct: 187 PKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNSRF 246
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+V L TA+++MY+KCG + A +F+ M ++NL W MIS + GRG A+ LF M
Sbjct: 247 NVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDME 306
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGK---------NYFDEMA---------------- 330
G P+ +F +++ AC+HL G+ N+ + +A
Sbjct: 307 LAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIGTALMDMYAKSGDAD 366
Query: 331 ---RVYNI--KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE----PNAVILRSFLGAC 381
++++ K + + M+ L G +EA ++ R M E P+ + + L AC
Sbjct: 367 TALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAVLWAC 426
Query: 382 RNHGQVLYLDDNLGKLL--LKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ G V + ++ +EP + +Y + S +G+ + A EL+V +
Sbjct: 427 SHLGLVEEGQKHFTSMMEVYGIEPTM-EHYGCMIDLLSRAGHSEEAEELLVKM 478
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 233/436 (53%), Gaps = 33/436 (7%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+++ R++F+ + + +NT+I Y + E+ KLF+EM + + PD +V
Sbjct: 165 INYARNVFDEMS-QRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVS 223
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR---- 165
ACGR + +++ + + + D ++ L+ MYA +D+A F +M VR
Sbjct: 224 ACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFV 283
Query: 166 ---------------------------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
D+V W++MI+ + D P +AL+VF M +
Sbjct: 284 STAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGI 343
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ VT++S++SAC +L + + +H Y +NGLE + + AL+ MY+KCG ++ A
Sbjct: 344 KPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARD 403
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M +N+ SW+ MI+ A +G + ++SLFA+M Q ++P+ ++F +L CSH GL
Sbjct: 404 VFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGL 463
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+EGK F M YNI P +EHYGCMVD+ GRA L+ EA +I +MP PN VI S +
Sbjct: 464 VEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLM 523
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR HG+ L L + K +LKLEP+ VL +++ + WD + + +K +
Sbjct: 524 SACRVHGE-LELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVF 582
Query: 439 KVPGCSWVKVNDGSAE 454
K G S + +N S E
Sbjct: 583 KEKGLSRIDLNGKSHE 598
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 200/409 (48%), Gaps = 34/409 (8%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPVTPPLFA 68
+ K+++H+ QLH L+T ++H + S S + +LF+++ P
Sbjct: 22 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIV 81
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N+L+R +++ +I + + G R D ++P ++KA + + G +H F
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+ SD ++ L+ MYAAC I+ A+ VF+EM RDVV+W++MI + +A K
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFK 201
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM-- 246
+F MK +N P+ + L ++VSAC N+R +I+ + + N + +D L TALV M
Sbjct: 202 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYA 261
Query: 247 -----------------------------YSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
YSK G ++ A +F+ K+L WT MIS
Sbjct: 262 GAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISA 321
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
A++ A+ +F +M +G+KPD ++ +++SAC +LG +D+ K + + ++
Sbjct: 322 YAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAK-WVHRYTHLNGLES 380
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ +++M + G ++ A + MPT N V S + A HG+
Sbjct: 381 VLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGE 428
>gi|242085550|ref|XP_002443200.1| hypothetical protein SORBIDRAFT_08g015300 [Sorghum bicolor]
gi|241943893|gb|EES17038.1| hypothetical protein SORBIDRAFT_08g015300 [Sorghum bicolor]
Length = 502
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 245/442 (55%), Gaps = 28/442 (6%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L L NT + + F+L S +LH R +F+ + P + AYN L+ A
Sbjct: 27 QVHAQGLVGGLLPNTTLDTDFVLLYSRCGALHRARQVFDGMSF-PSMHAYNVLLAASPPG 85
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +++L +L +GLRPD ++ P V++AC + +G H L ++GL ++ +
Sbjct: 86 T----AVELISRLLASGLRPDRYSIPAVLRACAELRDMLLGAVFHGLALRLGLLANVVVS 141
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
LL MYA + A VF+EMP RD V W+ M+ G+ + L++F + ++
Sbjct: 142 GALLDMYAKTGMLADATRVFDEMPERDAVVWNCMVTGYARAGRSEETLELFRKAQI---- 197
Query: 200 PNSVTLVSLVSACTSLINVRA-------GESIHSYAV-VNGLELDVALGTALVEMYSKCG 251
SV + + A +++NV A G IH V + D+A+G ALV+MY+KCG
Sbjct: 198 -ESVDMARDLRAVPNVLNVCANEGQLMKGREIHGRMVRCFAFDSDIAVGNALVDMYAKCG 256
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
V+ A VF M+ +N+ SW+ +IS +G G A+ ++ +M+ G+KP+ I+F +ILS
Sbjct: 257 QVDGAQAVFASMKVRNVMSWSTLISCYGVHGMGKEALRIYEEMVSRGVKPNCITFISILS 316
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+CSH GLV +G+ F+ M++V+ ++PT +HY CMVD+LGRAG IEEA IIR MP EP A
Sbjct: 317 SCSHSGLVSDGRRIFESMSKVHAVEPTADHYACMVDLLGRAGAIEEAVGIIRKMPMEPGA 376
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+ + L AC H V ++G++ L +LE +NYV + G D+ +
Sbjct: 377 SLWGALLSACATHNNV-----DVGEVAAYKLFELEEGNASNYVTLCGIYDAIGRSDSVSG 431
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + + G+ K PGCSWV V
Sbjct: 432 IRSRMRELGMVKTPGCSWVHVK 453
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 124/261 (47%), Gaps = 6/261 (2%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
+++ C + G VH+ GL + + + +Y+ C + A+ VF+ M
Sbjct: 12 LIRRCAASGALSPGAQVHAQGLVGGLLPNTTLDTDFVLLYSRCGALHRARQVFDGMSFPS 71
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
+ +++ ++A P A+++ R+ + P+ ++ +++ AC L ++ G H
Sbjct: 72 MHAYNVLLAA----SPPGTAVELISRLLASGLRPDRYSIPAVLRACAELRDMLLGAVFHG 127
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
A+ GL +V + AL++MY+K G + A +VF+ M E++ W M++G A GR
Sbjct: 128 LALRLGLLANVVVSGALLDMYAKTGMLADATRVFDEMPERDAVVWNCMVTGYARAGRSEE 187
Query: 287 AISLF--AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
+ LF A++ + D + +L+ C++ G + +G+ M R + +
Sbjct: 188 TLELFRKAQIESVDMARDLRAVPNVLNVCANEGQLMKGREIHGRMVRCFAFDSDIAVGNA 247
Query: 345 MVDMLGRAGLIEEAYHIIRNM 365
+VDM + G ++ A + +M
Sbjct: 248 LVDMYAKCGQVDGAQAVFASM 268
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P + L L+ C + + G +H+ +V GL + L T V +YS+CG + +A +V
Sbjct: 4 PTAGRLSVLIRRCAASGALSPGAQVHAQGLVGGLLPNTTLDTDFVLLYSRCGALHRARQV 63
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M ++ ++ ++ LA + G A+ L ++++ +GL+PD S A+L AC+ L +
Sbjct: 64 FDGMSFPSMHAYNVL---LAASPPGT-AVELISRLLASGLRPDRYSIPAVLRACAELRDM 119
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
G F +A + + G ++DM + G++ +A + MP E +AV+
Sbjct: 120 LLGA-VFHGLALRLGLLANVVVSGALLDMYAKTGMLADATRVFDEMP-ERDAVV 171
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 226/406 (55%), Gaps = 11/406 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F ++ T ++ TLI Y + +++F +M F++ V
Sbjct: 159 SMDNARLVFEDIG-TKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAV 217
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC +G VH+ + G +S+ + N +L MY C+ AK +F EM +D +
Sbjct: 218 SACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTI 277
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W+++IAGF DS ++L +F +M SPN T S+++AC +L + G+ +H
Sbjct: 278 TWNTLIAGFETLDS-YESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGI 336
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ GL+ ++ L AL++MY+KCG+V + K+F+ MR NL SWT M+ G +G G A+
Sbjct: 337 IHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAV 396
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M+ +G+KPD I F A+LSACSH GLVDEG YF M YN+ P + Y C+VD+
Sbjct: 397 DLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDL 456
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
L RAG ++EAY +I NMP +P+ I + LGAC+ + Q ++ KL +L+++P
Sbjct: 457 LSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQ-----PSIQKLAALKVLEMKPN 511
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL ++ S+ GNW A L + K G SW+++ +
Sbjct: 512 KAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKN 557
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 166/319 (52%), Gaps = 5/319 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S +LF+ +P + A+ ++I Y + + +F ML+ G++P+ FT V+
Sbjct: 56 SFEEAHTLFDEMP-HRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVL 114
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLD-SDKYIGNTLLRMYAAC-KEIDVAKAVFEEMPVRD 166
KAC + G VH L K+G S Y+ N L+ MYA C +D A+ VFE++ ++
Sbjct: 115 KACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKN 174
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VSW+++I G+ L+VF +M + + + VSAC S+ + G+ +H+
Sbjct: 175 AVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHA 234
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+ +G E ++ + A+++MY +C +A ++F M +K+ +W +I+G +
Sbjct: 235 AVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF-ETLDSYE 293
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV 346
++ +F++M+ G P+ +F+++++AC++L ++ G+ + + +E ++
Sbjct: 294 SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIH-RGLDNNLELSNALI 352
Query: 347 DMLGRAGLIEEAYHIIRNM 365
DM + G + +++ I M
Sbjct: 353 DMYAKCGNVADSHKIFSGM 371
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 17/288 (5%)
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
T RP PF V+ RC+ + L GL +D L++ Y +
Sbjct: 13 TNFRP----IPFSVQNSLRCIQNDTPFNPKDL---TGLTTD------LIKSYFDKGSFEE 59
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A +F+EMP RDV++W+SMI G+ +C+ S A VF M PN+ T+ +++ AC S
Sbjct: 60 AHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKS 119
Query: 215 LINVRAGESIHSYAVVNGLE-LDVALGTALVEMYSK-CGHVEKAFKVFNLMREKNLQSWT 272
L + G+ +H A+ G + + + AL++MY+ C ++ A VF + KN SWT
Sbjct: 120 LKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWT 179
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
+I+G + +F +M + SFS +SAC+ +G + GK +
Sbjct: 180 TLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVIN- 238
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
+ + + ++DM R EA + M T+ + + + +
Sbjct: 239 HGFESNLPVMNAILDMYCRCRCASEAKQLFGEM-TQKDTITWNTLIAG 285
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 217/386 (56%), Gaps = 2/386 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F++NT++ A+ S + +++F +M G + +TY V++ C + + G V
Sbjct: 417 PDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQV 476
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ I K GL +D + L+ MYA A VFE++ RD SW+ +++G+ +
Sbjct: 477 HACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEA 536
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++ F M N P+ TL +S C+ + ++ +G +HS+A+ +G V G AL
Sbjct: 537 EKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSG-AL 595
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY KCG++ A +F+ ++ +W +I G + +G G A+ F +M+ G +PD
Sbjct: 596 VDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDG 655
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
I+F +LSACSH GL++EG+ YF ++ +Y I PTMEHY CMVD+L +AG + EA +I
Sbjct: 656 ITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLIN 715
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP P++ I R+ LGACR H + + + + L +LEP ++ +L +++ + G W
Sbjct: 716 QMPLAPDSSIWRTILGACRIHRNI-EIAERAAERLFELEPHDASSSILLSNIYADLGRWS 774
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVN 449
+ + G+ K PGCSW+++N
Sbjct: 775 DVTRVRNILLDHGVKKEPGCSWIEIN 800
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 14/313 (4%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL------SISLHFTRSLFNNLPVTPP 65
+ +T+ +LH L+++L +T F+L SL L R +F+ +P
Sbjct: 62 VRRTLRRGQELHARLLRSALHPDT-----FLLDSLLNMYCKCGRLVDARRVFDGMP-HRD 115
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ A+ +I A+ S +++ +F M + G+ P+ FT V+KAC VH
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 126 LIFKV-GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ K+ GLD D Y+G++L+ Y +C E+D A+ V +P R VSW++++ G+
Sbjct: 176 QVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYR 234
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+ + ++ + + + TL +++ C L + G+S+H+ + GLE D L + LV
Sbjct: 235 RVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLV 294
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
EMYS+C E+A++VF + E ++ + MIS + A+ LF KM G+KP+
Sbjct: 295 EMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHY 354
Query: 305 SFSAILSACSHLG 317
F I S G
Sbjct: 355 IFVGIAGVASRTG 367
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 165/360 (45%), Gaps = 9/360 (2%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + + +I + + + E++ LF +M G++P+++ + + R + SV
Sbjct: 316 PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSV 375
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H+ I K G K +G+ +L MY + A F+ + D SW+++++ F + +
Sbjct: 376 HAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNC 435
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
L++F +M S N T VS++ CTSL+N+R G +H+ + +GL+ D + L
Sbjct: 436 EQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRML 495
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
V+MY++ G A VF ++E++ SWT+++SG A + F M++ ++P
Sbjct: 496 VDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSD 555
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH---YGCMVDMLGRAGLIEEAYH 360
+ + LS CS + + G + IK G +VDM + G I +A
Sbjct: 556 ATLAVSLSVCSDMASLGSGLQLHS-----WAIKSGWNSSVVSGALVDMYVKCGNIADAEM 610
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
+ T + V + + HG D +++ + + G +V S S +G
Sbjct: 611 LFHESETR-DQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAG 669
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+ + + L D ++ ++LL MY C + A+ VF+ MP RD+V+W++MI+ A
Sbjct: 69 GQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTA 128
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVA 238
AL +F RM +PN TL S++ AC+ + + +H V +NGL+ D
Sbjct: 129 AGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-DPY 187
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G++LVE Y+ CG ++ A V + E++ SW +++G A +G + + K++ +G
Sbjct: 188 VGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASG 247
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
+ + +L C LGL G++ + IK +E C+V+M R
Sbjct: 248 DEISKYTLPTVLKCCMELGLAKYGQSVHASV-----IKRGLETDNVLNSCLVEMYSRCLS 302
Query: 355 IEEAYHIIRNMPTEPNAV 372
EEAY + + EP+ V
Sbjct: 303 AEEAYEVFIRID-EPDVV 319
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N L+ YA+ + + ++++ +G +T P V+K C L G SVH+ +
Sbjct: 219 SWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASV 278
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL++D + + L+ MY+ C + A VF + DVV S+MI+ F D +AL
Sbjct: 279 IKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEAL 338
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F +M PN V + + + S+H+Y V +G + +G A++ MY
Sbjct: 339 DLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMY 398
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G V+ A F+L+ E + SW ++S + +F +M G + ++
Sbjct: 399 VKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYV 458
Query: 308 AILSACSHL 316
++L C+ L
Sbjct: 459 SVLRCCTSL 467
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
SPS A H + A E + + C +R G+ +H+ + + L D L
Sbjct: 33 SPSHANARLHTVAHAEELR---LHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLD 89
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+L+ MY KCG + A +VF+ M +++ +WT MIS G + A+ +FA+M Q G+ P
Sbjct: 90 SLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAP 149
Query: 302 DSISFSAILSACS 314
+ + +++L ACS
Sbjct: 150 NGFTLASVLKACS 162
>gi|212722054|ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
gi|194693506|gb|ACF80837.1| unknown [Zea mays]
gi|413926460|gb|AFW66392.1| hypothetical protein ZEAMMB73_680096 [Zea mays]
Length = 473
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 187/299 (62%), Gaps = 3/299 (1%)
Query: 85 SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLR 144
+++LFDEM G+ D +T P ++ AC C + S+H F++G + + LL
Sbjct: 102 ALRLFDEMRSRGVPTDPYTLPLLISACS-CSGFTLCQSLHGQGFRLGYNCHVFTQTALLN 160
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE--SPNS 202
Y C + A VFEEMPV+DVV+W+SM++G+V A++VF+ M+ A++ PN
Sbjct: 161 AYLKCGSVATACRVFEEMPVKDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADDLVWPNE 220
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
T+VSL +AC L ++ + +HSY GLE ++ + ALV+MY KCG +E A ++F L
Sbjct: 221 ATVVSLATACAGLGSLEHAKGLHSYVEKAGLEDELIVRNALVDMYGKCGCIESAHRLFCL 280
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
MREK+L SWT MISGL+ +GRG A+ LF M + G+ PDS +F +LSACSH GLVDEG
Sbjct: 281 MREKDLHSWTTMISGLSSHGRGEEAVGLFFSMCEEGVLPDSTTFIVVLSACSHAGLVDEG 340
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
+ F+ M +N+ +HYGCMVD+ RAGL+ AY I MP EPN IL + L AC
Sbjct: 341 IHIFNSMESEHNVPRDTKHYGCMVDLFSRAGLVRRAYEFISMMPFEPNLEILGALLSAC 399
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 235/393 (59%), Gaps = 3/393 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R++ + +P + ++ T+I Y++T +E++ LF +ML+ G P+ +T V+ +C
Sbjct: 65 RNVLDRMP-ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG 123
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I G VHSL+ K +S ++G++LL MYA + I A+ VF+ +P RDVVS +++
Sbjct: 124 PQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAI 183
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G+ +AL +F ++ N VT +LV+A + L ++ G+ +H+ + L
Sbjct: 184 ISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL 243
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
VAL +L++MYSKCG + + +VF+ M E+++ SW M+ G +G G+ ISLF K
Sbjct: 244 PFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-K 302
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ +KPDS++ A+LS CSH GLVDEG + FD + + + HYGC++D+LGR+G
Sbjct: 303 DLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSG 362
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+E+A ++I NMP E I S LGACR H V ++ + + + LL++EPE NYV+ +
Sbjct: 363 RLEKALNLIENMPFESTPSIWGSLLGACRVHANV-HVGELVAQKLLEMEPENAGNYVILS 421
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
++ + +G W ++ + +K + K PG SW+
Sbjct: 422 NIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 160/316 (50%), Gaps = 32/316 (10%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y + AC + G VH+ + ++G L+ MY C +D A+ V + MP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R VVSW++MI+G+ + +AL +F +M A PN TL +++++C+ ++ G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+HS V E + +G++L++MY+K ++++A +VF+ + E+++ S T +ISG A G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN-----------YFDEMA-- 330
A+ LF ++ G++ + ++F+ +++A S L +D GK +F +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 331 ---------------RVYN--IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE--PNA 371
RV++ ++ ++ + M+ GR GL E + +++ E P++
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDS 312
Query: 372 VILRSFLGACRNHGQV 387
V L + L C + G V
Sbjct: 313 VTLLAVLSGCSHGGLV 328
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 242/452 (53%), Gaps = 59/452 (13%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ R L P T L A+N L+RA A+ C + F E+ L PD++++ F+V+A
Sbjct: 67 YARLLLPQRPAT--LLAHNGLLRALARGPCPGLAFAAFREL---PLAPDHYSFTFLVRAA 121
Query: 112 GRCLLIG-------------IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI------ 152
+ GSVH+ F+ G +D ++ + + MYAA ++
Sbjct: 122 TSLAAAASATPVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAA 181
Query: 153 -------------------------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
D A+ +F+ MP RD V+W++M+ G+V +AL
Sbjct: 182 FAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREAL 241
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+ A + + VTLVS+++AC + + G +HSY G+ + V LGTALV+MY
Sbjct: 242 GLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMY 301
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
SKCG V + +VF MRE+N+ +WT +SGLA NG G + LF +M G++P+ ++F
Sbjct: 302 SKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFV 361
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
A+L CS GLV+EG+ FD M + ++P +EHYGCMVD+ GRAG +++A I +MP
Sbjct: 362 AVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPV 421
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGK----LLLKLEPELGANYVLAASVSSLSGNWD 423
EP+ + + L A R H V +LGK L ++E + A +VL +++ + S NW
Sbjct: 422 EPHEGVWGALLNASRIHNNV-----DLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWK 476
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
+++ + KG+ K+PGCS ++V DG E
Sbjct: 477 GVSKVRNMMKSKGVKKMPGCSAIEV-DGKVHE 507
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 239/430 (55%), Gaps = 36/430 (8%)
Query: 54 RSLFNNLPVT-PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ +P + + TL+ + + + S E++ +F EM + G++PD T + C
Sbjct: 70 RKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCA 129
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R + +G H + K+GL + N ++ MYA + A+ VF EM + VVSW+
Sbjct: 130 RLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTV 189
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESP-------------------------------- 200
++ G + + + VF M NE
Sbjct: 190 ILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMEL 249
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAFKV 259
N VTL S+++AC+ ++ G +H+YA+ EL++ +GTA+V+MY+KCG + AFK
Sbjct: 250 NYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKF 309
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F M ++N+ SW M+SGLA +G G A+ +F +M + KPD ++F+++LSACSH GLV
Sbjct: 310 FKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLV 368
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
D+G YF + VY I P +EHY CMVD+LGRAG +EEA ++R MP PN V+L S LG
Sbjct: 369 DQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLG 428
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
+C HG+ L L ++L + L++L+P+ ++L +++ +L+G + A L + ++G+ K
Sbjct: 429 SCSIHGK-LQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKK 487
Query: 440 VPGCSWVKVN 449
VPG S + V
Sbjct: 488 VPGMSSIHVG 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 55/343 (16%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDS--DKYIGNTLLRMYAACKEIDVAKAVFEE 161
Y F++++C R + IG +H+ I G+ + ++ N LL+ YA+C A+ VF+E
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDE 75
Query: 162 MP--VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+P +D V W++++ FV + +AL +F M+ P+ VTLV L C L +V
Sbjct: 76 IPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVV 135
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--------------- 264
G H V GL A+++MY+K G + +A +VF M+
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195
Query: 265 ----------------EKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFS 307
E+N +WTIMI+G D+G + +L +MI ++ + ++
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-----CMVDMLGRAGLIEEAYHII 362
+IL+ACS G + G+ Y +K + MVDM + G I A+
Sbjct: 256 SILTACSQSGDLMMGR-----WVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFF 310
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
+ MP + N V + L HG LG+ L + P++
Sbjct: 311 KKMP-QRNVVSWNAMLSGLAMHG--------LGRAALDIFPQM 344
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 252/441 (57%), Gaps = 5/441 (1%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
+ + ++HT +KT + + +R I L + L R +F+ +P + ++
Sbjct: 75 QRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP-QRNVVSWTA 133
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
+I AY++ + E++ LF EML++ P++FT+ ++ +C L G +HS+ K
Sbjct: 134 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 193
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
+S ++G++LL MYA I A VF +P RDVV+ +++I+G+ +ALK+F
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
++++ + NSVT S+++A + L + G+ +HS+ + +G V L +L++MYSKCG
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAIL 310
+V A ++F+ M E+ SW M+ G + +G + LF M + +KPDSI++ A+L
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373
Query: 311 SACSHLGLVDEGKNYFDEMARVYN-IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
S CSH L D G F M + I+P + HYGC+VD+LGRAG +EEA+ I+ MP P
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
A I S LG+CR H V + +G+ LL+LEPE NYV+ +++ + +G W+ +
Sbjct: 434 TAAIWGSLLGSCRVHSDV-EIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIR 492
Query: 430 VAINQKGLNKVPGCSWVKVND 450
+ +K + K PG SWV+++
Sbjct: 493 DLMQEKAVTKEPGRSWVELDQ 513
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 7/311 (2%)
Query: 78 KTSCSIESIKLFDEMLKTGL--RPDNFT-YPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
KT CS S +L + +L+ + R F Y ++ C I G VH+ + K
Sbjct: 38 KTLCS--SGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLP 95
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
Y+ L+ +Y C + A+ +F+EMP R+VVSW++MI+ + +AL +F M
Sbjct: 96 SVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEML 155
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
++ PN T +++++C + G IHS A+ E + +G++L++MY+K G +
Sbjct: 156 RSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC 215
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A VF+ + E+++ + T +ISG A G A+ LF ++ G+ +S++++++L+A S
Sbjct: 216 DAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS 275
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
L ++ GK + R + ++DM + G + A I +MP E +
Sbjct: 276 GLAALNHGKQVHSHVLRSGQYSYVVL-LNSLIDMYSKCGNVCYARRIFDSMP-ERTCISW 333
Query: 375 RSFLGACRNHG 385
+ L HG
Sbjct: 334 NAMLVGYSKHG 344
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 239/424 (56%), Gaps = 42/424 (9%)
Query: 67 FAYNTLIRAYAKTSCSIES---IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
F +N +IRA S + I ++ M + PD T+PF++ + L + +G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKE-------------------------------I 152
H+ I GLD D ++ +LL MY++C + I
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA--NES---PNSVTLVS 207
D A+ +F+EMP R+V+SWS +I G+V C +AL +F M+L NE+ PN T+ +
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN-LMREK 266
++SAC L + G+ +H+Y +E+D+ LGTAL++MY+KCG +E+A +VFN L +K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 267 NLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNY 325
++++++ MI LA G + LF++M + + P+S++F IL AC H GL++EGK+Y
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
F M + I P+++HYGCMVD+ GR+GLI+EA I +MP EP+ +I S L R G
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
+ + L K L++L+P YVL ++V + +G W + + KG+NKVPGCS+
Sbjct: 385 DIKTCEGAL-KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 446 VKVN 449
V+V
Sbjct: 444 VEVE 447
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFV 107
SL + +FN L + AY+ +I A + E +LF EM + + P++ T+ +
Sbjct: 249 SLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGI 308
Query: 108 VKACGRCLLIGIGGSVHS-LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR- 165
+ AC LI G S +I + G+ ++ +Y I A++ MP+
Sbjct: 309 LGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEP 368
Query: 166 DVVSWSSMIAG 176
DV+ W S+++G
Sbjct: 369 DVLIWGSLLSG 379
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 229/387 (59%), Gaps = 4/387 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I A+A++ ++ +LF M ++ ++ +++T ++ C + G S+H
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K GL+ + + +L MY C + A +F P RD+VSW+S+I+ ++ D+
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGK 549
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN--GLELDVALGTAL 243
AL +F+ M ++ PNSVT+++++++CT L ++ G+ +H+Y LE+D +L A
Sbjct: 550 ALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAF 608
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ MY++CG ++ A K+F ++ +++ SW MI+G +GRG A FA+M+ G KP++
Sbjct: 609 ITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNN 668
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+SF+++LSACSH GL G F M R + I P + HYGCMVD+LGR G EA I
Sbjct: 669 VSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFIN 728
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP EP+A I R+ L +C+ L+ GK L++LEP N++L +++ + +G W
Sbjct: 729 SMPIEPDASIWRALLSSCQIKSNNKLLETIFGK-LVELEPSNPGNFILLSNIYAAAGLWS 787
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
++ + ++GL K PG SW+ + +
Sbjct: 788 EVVQIRKWLRERGLGKPPGTSWIVIGN 814
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 178/315 (56%), Gaps = 6/315 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++I+ + K + + +M G+ PD+ T P V+KACGR IG G +HS I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ L +D +G L+ Y C + A VF EMP RD+VSW+++I+G+V C +A+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMY 247
+F MK A +PNS T+V+L+ AC ++ +R G+ IH Y + NGL ++D +GTALV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+ V + +VF+LM +N+ SW +I+G + G A+ L++ M+ G+K D+++
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++ AC+ G + G ++A +N+ + +++M G +E ++ + +PT
Sbjct: 267 VVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 368 EPNAV---ILRSFLG 379
A+ ++ S++G
Sbjct: 326 SDAALWNSMISSYIG 340
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 165/305 (54%), Gaps = 4/305 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +K +L ++ I++ + + S + SL + +LFN +P + +N++I +Y
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL-WNSMISSYIGF 341
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG-SVHSLIFKVGLDSDKYI 138
E+I LF +M ++ D T ++ C I G +H+ K G++ D Y+
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYL 401
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN LL MY +I A+ VFE+M DV+SW++MI+ F + A ++F M +
Sbjct: 402 GNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEI 461
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
NS T+VSL++ C ++ G SIH +A+ NGLE++ +L T+L EMY CG A
Sbjct: 462 KFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATN 521
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F +++L SW +IS N A+ LF MI + L+P+S++ IL++C+ L
Sbjct: 522 MFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAH 580
Query: 319 VDEGK 323
+ G+
Sbjct: 581 LPLGQ 585
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 132/252 (52%), Gaps = 2/252 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++N LI Y C E++ LF EM K GL P++ T ++ ACG L + +G +H
Sbjct: 126 LVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHG 185
Query: 126 LIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ GL D D Y+G L+ Y + ++ VF M VR++VSW+++I GF+ +
Sbjct: 186 YCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCA 244
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
ALK++ M + ++VT++ ++ AC +R G +H A+ L D+ + AL+
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MYS G +E ++ +FN + + W MIS G AI+LF KM +K D
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVR 364
Query: 305 SFSAILSACSHL 316
+ + +LS C+ L
Sbjct: 365 TIAIMLSLCNDL 376
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 237/441 (53%), Gaps = 7/441 (1%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
S +H+ +H +K + +++ + S + LF + TP + ++
Sbjct: 265 SGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMS-TPDVVSWTN 323
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
LI Y + ++ F M K+ + P+ +T+ V+ AC + G +H ++G
Sbjct: 324 LIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLG 383
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
L + N+++ +Y+ C + A VF+ M +D++SWS++I+ + +A
Sbjct: 384 LVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLS 443
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
M PN L S++S C S+ + G+ +H+YA+ GL+ + + +AL+ MYS+ G
Sbjct: 444 WMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSG 503
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
++++A K+F+ ++ ++ SWT MI+G A++G AISLF + GL PD ++F IL+
Sbjct: 504 NLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILT 563
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
AC+H GLVD G Y+ M Y I P+ EHYGC++D+L RAG + EA H++RNMP +
Sbjct: 564 ACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDD 623
Query: 372 VILRSFLGACRNHGQVLYLDDNL--GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
V+ + L ACR+HG LD + + +L+L P ++ A++ S SG + AA +
Sbjct: 624 VVWSTLLRACRDHGD---LDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVR 680
Query: 430 VAINQKGLNKVPGCSWVKVND 450
+ KG+ K PG SW+ ND
Sbjct: 681 KLMKSKGVIKEPGWSWINSND 701
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 164/311 (52%), Gaps = 2/311 (0%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+F N+ T + ++ +I CS++ + F EM ++ + D+ T+ +KA
Sbjct: 207 SVFENM-TTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAES 265
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
L+ G ++H+ K G + Y+ NTL MY+ C++ D +F +M DVVSW+++I
Sbjct: 266 GLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLI 325
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+V AL F RM+ ++ SPN T S++SAC +L + GE IH +A+ GL
Sbjct: 326 MTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLV 385
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+++ +++ +YSKCG +++A VF+ M K++ SW+ +IS A + + M
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G KP+ + +++LS C + L++ GK + TM H ++ M R+G
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVH-SALISMYSRSGN 504
Query: 355 IEEAYHIIRNM 365
++EA I ++
Sbjct: 505 LQEASKIFDSI 515
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 3/313 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACG 112
R +FN + + ++ LI Y + S E++ LF M + +GL+ D F +KAC
Sbjct: 104 RDMFNKMSHRDEI-SWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACA 162
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ + G +H K GL + ++ + L+ MY + + +VFE M R+VVSW++
Sbjct: 163 LGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTA 222
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+I G V D L F M + +S T + A + G++IH+ + G
Sbjct: 223 VIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQG 282
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ L MYSKC + ++F M ++ SWT +I G A+ F
Sbjct: 283 FNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFK 342
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M ++ + P+ +F++++SAC++L + G+ R+ + + ++ + +
Sbjct: 343 RMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRL-GLVDALSVSNSIITLYSKC 401
Query: 353 GLIEEAYHIIRNM 365
GL++EA + M
Sbjct: 402 GLLQEASLVFDGM 414
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+ L+ +I A+ +F +M RD +SW+++IAG+V + ++AL +F M + +
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 200 PNSVTLVSL-VSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+VS+ + AC +NV GE +H ++V +GL V + +ALV+MY K G E+
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M +N+ SWT +I GL G +S F++M ++ + DS +F+ L A + GL
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 319 VDEG--------KNYFDEMARVYNI---------KP--TMEHYGCMV--DMLGRAGLI-- 355
+ G K F+E A V N KP M +G M D++ LI
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 356 ------EE----AYHIIRNMPTEPNAVILRSFLGACRN 383
EE A+ +R PN S + AC N
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACAN 365
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 229/387 (59%), Gaps = 4/387 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++NT+I A+A++ ++ +LF M ++ ++ +++T ++ C + G S+H
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K GL+ + + +L MY C + A +F P RD+VSW+S+I+ ++ D+
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGK 549
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN--GLELDVALGTAL 243
AL +F+ M ++ PNSVT+++++++CT L ++ G+ +H+Y LE+D +L A
Sbjct: 550 ALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAF 608
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+ MY++CG ++ A K+F ++ +++ SW MI+G +GRG A FA+M+ G KP++
Sbjct: 609 ITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNN 668
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
+SF+++LSACSH GL G F M R + I P + HYGCMVD+LGR G EA I
Sbjct: 669 VSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFIN 728
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
+MP EP+A I R+ L +C+ L+ GK L++LEP N++L +++ + +G W
Sbjct: 729 SMPIEPDASIWRALLSSCQIKSNNKLLETIFGK-LVELEPSNPGNFILLSNIYAAAGLWS 787
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVND 450
++ + ++GL K PG SW+ + +
Sbjct: 788 EVVQIRKWLRERGLGKPPGTSWIVIGN 814
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 178/315 (56%), Gaps = 6/315 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++I+ + K + + +M G+ PD+ T P V+KACGR IG G +HS I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ L +D +G L+ Y C + A VF EMP RD+VSW+++I+G+V C +A+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL-ELDVALGTALVEMY 247
+F MK A +PNS T+V+L+ AC ++ +R G+ IH Y + NGL ++D +GTALV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
+ V + +VF+LM +N+ SW +I+G + G A+ L++ M+ G+K D+++
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++ AC+ G + G ++A +N+ + +++M G +E ++ + +PT
Sbjct: 267 VVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 368 EPNAV---ILRSFLG 379
A+ ++ S++G
Sbjct: 326 SDAALWNSMISSYIG 340
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 165/305 (54%), Gaps = 4/305 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +K +L ++ I++ + + S + SL + +LFN +P + +N++I +Y
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL-WNSMISSYIGF 341
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG-SVHSLIFKVGLDSDKYI 138
E+I LF +M ++ D T ++ C I G +H+ K G++ D Y+
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYL 401
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN LL MY +I A+ VFE+M DV+SW++MI+ F + A ++F M +
Sbjct: 402 GNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEI 461
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
NS T+VSL++ C ++ G SIH +A+ NGLE++ +L T+L EMY CG A
Sbjct: 462 KFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATN 521
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F +++L SW +IS N A+ LF MI + L+P+S++ IL++C+ L
Sbjct: 522 MFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAH 580
Query: 319 VDEGK 323
+ G+
Sbjct: 581 LPLGQ 585
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 132/252 (52%), Gaps = 2/252 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++N LI Y C E++ LF EM K GL P++ T ++ ACG L + +G +H
Sbjct: 126 LVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHG 185
Query: 126 LIFKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ GL D D Y+G L+ Y + ++ VF M VR++VSW+++I GF+ +
Sbjct: 186 YCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCA 244
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
ALK++ M + ++VT++ ++ AC +R G +H A+ L D+ + AL+
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MYS G +E ++ +FN + + W MIS G AI+LF KM +K D
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVR 364
Query: 305 SFSAILSACSHL 316
+ + +LS C+ L
Sbjct: 365 TIAIMLSLCNDL 376
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 236/435 (54%), Gaps = 48/435 (11%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+++ V + ++N+LI Y + + +++++F M+ G+ PD T V AC
Sbjct: 209 FDDMDVRN-IVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267
Query: 117 IGIGGSVHSLIFKVGLDSDKY-----IGNTLLRMYAACKEIDVAKAVFEEMPVRD----- 166
I G +H+ + K DKY +GN L+ MYA C+ ++ A+ VF+ MP+RD
Sbjct: 268 IREGLQIHARVMK----HDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 167 --------------------------VVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
VVSW+++IAG+ +A+++F +K + P
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGL------ELDVALGTALVEMYSKCGHVE 254
T +L++AC +L +++ G H++ + +G + D+ +G +L++MY KCG VE
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVE 443
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
VF M E++ SW MI G A NG G A+ +F +M+ +G +PD ++ +LSACS
Sbjct: 444 DGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACS 503
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GLV+EG+ YF M + + P +HY CMVD+LGRAG ++EA ++I+ MP EP+AV+
Sbjct: 504 HAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVW 563
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S L AC+ HG + L + + LL+++P YVL +++ + G W + + Q
Sbjct: 564 GSLLAACKVHGNIT-LGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622
Query: 435 KGLNKVPGCSWVKVN 449
G+ K PGCSW+ +
Sbjct: 623 MGVIKQPGCSWISIQ 637
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 175/409 (42%), Gaps = 82/409 (20%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LF +P ++N ++ +A+ E+++ +M + +++ + AC
Sbjct: 106 NLFKCMPERDQC-SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGL 164
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ + IG +H LI K D Y+G+ L+ MY+ C+ + A+ F++M VR++VSW+S+I
Sbjct: 165 MDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLI 224
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV-NGL 233
+ AL+VF RM P+ +TL S+ SAC SL +R G IH+ + +
Sbjct: 225 TCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKY 284
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNL------------------------------- 262
D+ LG ALV+MY+KC V +A VF+
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSN 344
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL------ 316
M E+N+ SW +I+G NG A+ LF + + + P +F +L+AC++L
Sbjct: 345 MMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG 404
Query: 317 -----------------------------------GLVDEGKNYFDEMARVYNIKPTMEH 341
GLV++G+ F+ M N+
Sbjct: 405 RQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVS----- 459
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNM---PTEPNAVILRSFLGACRNHGQV 387
+ M+ + G EA I R M P+ V + L AC + G V
Sbjct: 460 WNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLV 508
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 31/275 (11%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-------------------- 162
VH+ I K S+ +I N L+ +Y C ++ A+ VF+ M
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 163 -----------PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
P RD SW++M++GF D +AL+ M + N + S +SA
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C L+++ G IH + LDV +G+ALV+MYSKC V A + F+ M +N+ SW
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSW 220
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I+ NG A+ +F +M+ G++PD I+ +++ SAC+ L + EG + +
Sbjct: 221 NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK 280
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ + +VDM + + EA + MP
Sbjct: 281 HDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 47/297 (15%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ R +F+N+ + + ++N LI Y + + E+++LF + + + P ++T+ ++
Sbjct: 334 SVKAARLMFSNM-MERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLL 392
Query: 109 KACGRCLLIGIGGSVHSLI------FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
AC + +G H+ I FK G DSD ++GN+L+ MY C ++ + VFE M
Sbjct: 393 NACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERM 452
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
RD VSW++MI G+ ++AL++F M ++ E P+ VT++ ++SAC+ V G
Sbjct: 453 LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGR 512
Query: 223 S-IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
S + +GL T +V++ + G +++A
Sbjct: 513 CYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEA------------------------- 547
Query: 282 GRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
+IQT ++PD++ + ++L+AC G + GK Y E R+ I P
Sbjct: 548 ----------NNLIQTMPMEPDAVVWGSLLAACKVHGNITLGK-YVAE--RLLEIDP 591
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+S L+ C +V +H+ + ++ + LV++Y KCG +E A KVF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ M+++N SW ++ L G + A++LF M + D S++A++S + +
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPER----DQCSWNAMVSGFAQRDRFE 133
Query: 321 EGKNYFDEM 329
E + +M
Sbjct: 134 EALRFVVDM 142
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 225/413 (54%), Gaps = 32/413 (7%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ +I Y ++ +++ LF+EM + PD V+ ACGR + G +H I
Sbjct: 191 WSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIM 250
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVA-------------------------------KA 157
+ + D ++ + L+ MYA+C +D+A ++
Sbjct: 251 ENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARS 310
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
VF +M +D+V WS+MI+G+ DSP +AL +F+ M+ P+ VT++S+++AC L
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGA 370
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG 277
+ + IH + NG + + AL+EMY+KCG +E+A ++F+ M KN+ SWT MIS
Sbjct: 371 LDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISA 430
Query: 278 LADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKP 337
A +G A+ F +M ++P+ I+F +L ACSH GLV+EG+ F M +NI P
Sbjct: 431 FAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITP 490
Query: 338 TMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL 397
HYGCMVD+ GRA L+ EA ++ MP PN +I S + ACR HG++ L + K
Sbjct: 491 KHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEI-ELGEFAAKR 549
Query: 398 LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
LL+L+P+ +V +++ + + W+ ++ + KG++K GCS ++N+
Sbjct: 550 LLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 215/436 (49%), Gaps = 67/436 (15%)
Query: 18 HLHQLHTLFLKTSLDHNTCIISRFILTS--LSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
HL Q+H L++ LD +T ++ + +++S LS SL + S+FN +P P N +R
Sbjct: 38 HLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIP-KPETHLCNRFLRE 96
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+++ +++ +++ M GL D F++P ++KA R + G +H L K+G DSD
Sbjct: 97 LSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSD 156
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ L+RMYAAC I A+ +F++M RDVV+WS MI G+ +DAL +F MK
Sbjct: 157 PFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKN 216
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG---- 251
N P+ + L +++SAC N+ G+ IH + + N + +D L +ALV MY+ CG
Sbjct: 217 YNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDL 276
Query: 252 ---------------------------HVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
+E A VFN M +K+L W+ MISG A++
Sbjct: 277 ALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSP 336
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK------------------NYF 326
A++LF +M G+KPD ++ ++++AC+HLG +D+ K N
Sbjct: 337 QEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNAL 396
Query: 327 DEM----------ARVYNIKPTME--HYGCMVD---MLGRAGLIEEAYHIIRNMPTEPNA 371
EM R+++ P + CM+ M G AG +H + + EPN
Sbjct: 397 IEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNG 456
Query: 372 VILRSFLGACRNHGQV 387
+ L AC + G V
Sbjct: 457 ITFVGVLYACSHAGLV 472
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
RS+FN + V L ++ +I YA++ E++ LF+EM G++PD T V+ AC
Sbjct: 308 ARSVFNQM-VKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACA 366
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ +H + K G I N L+ MYA C ++ A+ +F++MP ++V+SW+
Sbjct: 367 HLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTC 426
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
MI+ F AL+ FH+M+ N PN +T V ++ AC+ V G I Y+++N
Sbjct: 427 MISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF-YSMIN 484
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 247/475 (52%), Gaps = 50/475 (10%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISLH-FTRSLFNNLPV-TPPLFAYNTLIRAY 76
L Q+H + +L N + + I L H R LF++ P +PP+ +N +IR Y
Sbjct: 90 LQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTY 149
Query: 77 AKTSCSIESIKLFDEML----KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
+K S E I LF ML + PD +T+ FV+ +C + + G VH ++ K G
Sbjct: 150 SKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGF 209
Query: 133 DSDKYIGNTLLRM-------------------------------YAACKEIDVAKAVFEE 161
+S+ Y+GN+++ M YA E+D A +F
Sbjct: 210 ESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNM 269
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRA 220
MPVR+ VSW+ MI+GF+ C +AL F M + +PN LV ++SAC L +
Sbjct: 270 MPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQ 329
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IH Y G+ + TAL++MY+KCG ++ A +VFN + ++++ S+T MISGL+
Sbjct: 330 GNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSY 389
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G G A+ +F +M+ + P+ I+ +L+ CSH GLV+EG + M ++ I P +E
Sbjct: 390 HGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPKIE 449
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL-- 398
HYGC +D+LGRAG +E A +++ MP EP+ VI R+ L A R H V NLG+ +
Sbjct: 450 HYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNV-----NLGEQIIS 504
Query: 399 ----LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LK G +L+ +SL G W+ E+ + + PGCSW++VN
Sbjct: 505 HIGQLKSSDHNGGEVLLSNLYASL-GRWERVTEMRKLMVDRRSESSPGCSWIEVN 558
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 231/417 (55%), Gaps = 10/417 (2%)
Query: 35 TCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLK 94
+CI +R +L++ R++F+ + P + +NTL+ Y + ++++LF M
Sbjct: 359 SCIKARDVLSA--------RAMFDKIS-RPSVTTWNTLLSGYCQEELHQDTVELFRRMQH 409
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
++PD T ++ +C R ++ +G VHS + L +D ++ + L+ MY+ C +I +
Sbjct: 410 QNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 469
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A+ +F M RDVV W+SMI+G +A F +M+ P + S++++C
Sbjct: 470 ARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCAR 529
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L +V G IH+ V +G + +V +G+AL++MY+KCG+++ A F+ M KN+ +W M
Sbjct: 530 LSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEM 589
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I G A NG G A+ LF M+ T +PD ++F A+L+ CSH GLVDE +F+ M Y
Sbjct: 590 IHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYG 649
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
I P EHY C++D LGRAG + E +I NMP + + ++ L AC H L +
Sbjct: 650 ITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNA-ELGECA 708
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
K L +L+P+ + YVL +++ + G A+ + ++ +G+ K G SW+ DG
Sbjct: 709 AKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDG 765
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 17/347 (4%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R+L + +P + ++NT+I A A++ + E+++L++ ML+ GL P +FT V+
Sbjct: 90 LDAARALLDEMP-DRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLS 148
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG + G H L KVGLD + ++ N LL MY C ++ A +F+ M + VS
Sbjct: 149 ACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVS 208
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLV----SACTSLINV----RAG 221
+++M+ G V S DAL++F RM + + V + S++ AC S +V R G
Sbjct: 209 FTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLG 268
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH+ V G D +G +L++MY+KC +++A KVF+ + + SW I+I+G
Sbjct: 269 QCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQA 328
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G A+ + M ++G +P+ +++S +L++C V + FD+++R P++
Sbjct: 329 GSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISR-----PSVTT 383
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHG 385
+ ++ + L ++ + R M +P+ L L +C G
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLG 430
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
+ Y N L ++D A+A+ +EMP R+VVSW+++IA + +AL+++ M
Sbjct: 73 NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
P TL S++SAC ++ + G H AV GL+ ++ + AL+ MY+KCG VE
Sbjct: 133 REGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVE 192
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
A ++F+ M N S+T M+ GL G + A+ LFA+M ++G++ D ++ S++L +C+
Sbjct: 193 DAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCA 252
Query: 315 --------------------------------HLG--LVDEGKN--YFDEMARVYNIKPT 338
H+G L+D DE +V++ P
Sbjct: 253 QACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPN 312
Query: 339 ME--HYGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQVL 388
+ + ++ G+AG +A ++ M +EPN V + L +C VL
Sbjct: 313 ISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVL 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 164/351 (46%), Gaps = 37/351 (10%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N+LI Y K E++K+FD + ++ ++ G+ V +L+ +
Sbjct: 288 NSLIDMYTKCMQMDEAVKVFDSLPNI----STVSWNILITGFGQAGSYAKALEVLNLMEE 343
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G + ++ + +L +++ A+A+F+++ V +W+++++G+ + D +++
Sbjct: 344 SGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVEL 403
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F RM+ N P+ TL ++S+C+ L + G +HS +V L D+ + + LV+MYSK
Sbjct: 404 FRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSK 463
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG + A +FN M E+++ W MISGLA + A F +M G+ P S++++
Sbjct: 464 CGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASM 523
Query: 310 LSACSHLGLVDEGKN-------------------YFDEMARVYNIKPTMEHYGCMV---- 346
+++C+ L V +G+ D A+ N+ + CMV
Sbjct: 524 INSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNI 583
Query: 347 ----DML---GRAGLIEEAYHIIRNMPT---EPNAVILRSFLGACRNHGQV 387
+M+ + G E+A + M T P+ V + L C + G V
Sbjct: 584 VAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLV 634
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 225/385 (58%), Gaps = 3/385 (0%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L ++ +I Y++ +++LF + +G+ P++ T ++ +C + +G +H
Sbjct: 304 LVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHG 363
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L K GLD D + N L+ MYA C + A+ VFE M +DVVSW+S+I+GFV +
Sbjct: 364 LAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYE 422
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALV 244
AL +F RM L SP++VT+V ++SAC SL + G S+H A+ +GL + + +GTAL+
Sbjct: 423 ALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALL 482
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
Y+KCG A VF+ M EKN +W MI G G GN +++LF M++ ++P+ +
Sbjct: 483 NFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEV 542
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
F+ IL+ACSH G+V EG F+ M N P+M+HY CMVDML RAG +EEA I
Sbjct: 543 VFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIER 602
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP +P+ + +FL C H + L K +L+L P+ YVL +++ + G W
Sbjct: 603 MPVQPSVSVFGAFLHGCGLHSR-FELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGM 661
Query: 425 AAELMVAINQKGLNKVPGCSWVKVN 449
++ I Q+GLNKVPGCS V+++
Sbjct: 662 VKQVREMIKQRGLNKVPGCSSVEMD 686
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 183/369 (49%), Gaps = 20/369 (5%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLF 67
L +L + L LH FL L ++ + ++ + S L R +FN+LP T L+
Sbjct: 39 LSRLCTNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLP-TRDLY 97
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP---DNFTYPFVVKACGRCLLIGIGGSVH 124
+ +IRAY + L+ +++ L P D + V K+C H
Sbjct: 98 CFKVMIRAYFLNDTPSGVVSLY-RLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITH 156
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD-VVSWSSMIAGFVACDSP 183
K L SD ++ L+ YA +D A F+E+ D VVSW+SMI +V D
Sbjct: 157 CHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCA 215
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ L +F+RM+ A N T+ SLVSACT L + G+ +H + + NG+ ++ L T+L
Sbjct: 216 REGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSL 275
Query: 244 VEMYSKCGHVEKAFKVFNLMR----EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
+ MY KCG+++ A KVF+ +++L SWT MI G + G + A+ LF +G+
Sbjct: 276 LNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGI 335
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY---GCMVDMLGRAGLIE 356
P+S++ S++LS+C+ LG GK + +K ++ + +VDM + G++
Sbjct: 336 LPNSVTVSSLLSSCAQLGNSVMGK-----LLHGLAVKCGLDDHPVRNALVDMYAKCGVVS 390
Query: 357 EAYHIIRNM 365
+A + M
Sbjct: 391 DARCVFEAM 399
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 232/390 (59%), Gaps = 11/390 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +N++I A + +++LF M+++G+ PD T + A +C SVH
Sbjct: 234 LVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHC 293
Query: 126 LIFKVGLD-SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + G D D GN ++ MYA +ID A+ VF+ +P RDVVSW+++I G++ +
Sbjct: 294 YVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLAN 353
Query: 185 DALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A+++++ M P T VS++ A + L ++ G +H+ ++ GL LDV + T L
Sbjct: 354 EAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCL 413
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
+++Y+KCG + +A +F M ++ W +I+GL +G G A+SLF++M Q +KPD
Sbjct: 414 IDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDH 473
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F ++L+ACSH GLVD+G+++FD M VY I P +HY CMVDMLGRAG ++EA+ I+
Sbjct: 474 VTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQ 533
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLS 419
+MP +P++ + + LGACR HG V +GK+ L +L+PE YVL +++ +
Sbjct: 534 SMPIKPDSAVWGALLGACRIHGNV-----EMGKVASQNLFELDPENVGYYVLMSNMYAKI 588
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G WD + + ++ L K PG S ++V
Sbjct: 589 GKWDGVDAVRSLVRRQNLQKTPGWSSMEVK 618
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 165/332 (49%), Gaps = 8/332 (2%)
Query: 38 ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG- 96
+ R + L S H R+L +L V PPL N+LI A+++ + ++ L +L
Sbjct: 6 LPRGVHAVLITSGHL-RNLDPHLQV-PPLLLVNSLIAAFSRAALPRLALPLLRRLLAGAH 63
Query: 97 -LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL-DSDKYIGNTLLRMYAACKEIDV 154
LRPD+FT+P +V+A +H+ ++GL + + +L+ Y +
Sbjct: 64 PLRPDSFTFPPLVRAAPGP---ASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAE 120
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
A VF+EMP RDV +W++M++G +DA+ + RM + ++VTL S++ C
Sbjct: 121 AYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVV 180
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + +H YAV +GL ++ + AL+++Y K G + +A VF M ++L +W +
Sbjct: 181 LGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSI 240
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
IS G+ A+ LF M+++G+ PD ++ ++ SA + G K+ + R
Sbjct: 241 ISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGW 300
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+ MVDM + I+ A + N+P
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP 332
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 218/380 (57%), Gaps = 1/380 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++ ++ +A+ S +++KLF +M ++G P FT V+ AC I G +H
Sbjct: 288 WSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSL 347
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K+G + Y+ + L+ MYA C I A+ FE + DVV W+S+I G+V AL
Sbjct: 348 KLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALN 407
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+L PN +T+ S++ AC++L + G+ +H+ + L++ +G+AL MY+
Sbjct: 408 LYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYA 467
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG ++ +++F M +++ SW MISGL+ NGRGN + LF KM G KPD+++F
Sbjct: 468 KCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVN 527
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH+GLVD G YF M +NI PT+EHY CMVD+L RAG + EA I + +
Sbjct: 528 LLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVD 587
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
+ R L A +NH + L G+ L++L + YVL +S+ + G W+ +
Sbjct: 588 HGLCLWRILLAASKNH-RDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERV 646
Query: 429 MVAINQKGLNKVPGCSWVKV 448
+ +G+ K PGCSW+++
Sbjct: 647 RGMMKARGVTKEPGCSWIEL 666
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 179/349 (51%), Gaps = 5/349 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHF-TRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q H L +KT+ H+ S + L F R LF+ +P + ++ T+I YA
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAV-SWATMISGYASQ 195
Query: 80 SCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ E+ +LF M + G + F + V+ A +L+ G VHSL K GL
Sbjct: 196 ELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS 255
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ N L+ MY C ++ A FE ++ ++WS+M+ GF ALK+F+ M +
Sbjct: 256 VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSG 315
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
E P+ TLV +++AC+ + G +H Y++ G EL + + +ALV+MY+KCG + A
Sbjct: 316 ELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDAR 375
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
K F +++ ++ WT +I+G NG A++L+ KM G+ P+ ++ +++L ACS+L
Sbjct: 376 KGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLA 435
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+D+GK + + YN + + M + G +++ Y I MP
Sbjct: 436 ALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP 483
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 7/221 (3%)
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
C R + G ++H+ I G S I N+L+ +YA C A VF+ + +DVVSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 171 SSMIAGFVACDSPSDALKVFH---RMKLANES--PNSVTLVSLVSACTSLINVRAGESIH 225
+ +I F + + +L V H ++ +A+++ PN+ TL + +A ++L + RAG H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+ AV DV ++L+ MY K G V +A +F+ M E+N SW MISG A +
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 286 YAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDEGKN 324
A LF M + G + F+++LSA + LV+ G+
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQ 240
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 234/435 (53%), Gaps = 15/435 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH + ++ +D +++ I SL+ + R LF+ L ++ ++I YA+
Sbjct: 91 LHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWTSMIAGYARW 150
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++LF MLK G+ F + AC + + +G +H K LD + +
Sbjct: 151 GQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVV 210
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ MY C I A+++F+ P R++++W++MIAG+ CD P AL++ M N+
Sbjct: 211 NSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMALQLLLEM---NDE 266
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN TL S+ SAC L +R G+ +H + D+ +G ALV+MYSKCG + A V
Sbjct: 267 PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNV 326
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K+ SWT MI+G NG GN A+ LF+ MI G+ PD + F +++S+CSH GLV
Sbjct: 327 FDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLV 386
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG N+F M YN++P E YG +V++L RAG + EA +I MP P+ + + LG
Sbjct: 387 DEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLG 446
Query: 380 ACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
A + H V +G+L + ++ P+ NY++ AS+ + W A ++
Sbjct: 447 ASKMHNNV-----EMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSLRGI 501
Query: 436 GLNKVPGCSWVKVND 450
G K G SW++V D
Sbjct: 502 GSRKEAGISWIEVMD 516
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 11/338 (3%)
Query: 30 SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
S H T IS L S H R+LF+ +P + A+ ++ YA E++ +F
Sbjct: 2 SQKHATTFISS--LCSRGAVCH-ARALFDEMP-ERDVVAWTAMLSGYASNGLRREALDVF 57
Query: 90 DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC 149
M+ G P+ +T V+ AC + +H++ + G+D Y+ N L+ YA+
Sbjct: 58 RRMVAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASL 117
Query: 150 KEIDV-AKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
E V A+ +F+ + R SW+SMIAG+ L++F M ++
Sbjct: 118 AEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSI 177
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
+ ACT +I++ G+ +H + L++++A+ +L++MY C + A +F+ E+N
Sbjct: 178 ALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERN 237
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L +W MI+G + + +++ +P+ + ++I SAC+ L + GK
Sbjct: 238 LITWNTMIAGYSQCD----PLMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHG 293
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ R + ++ +VDM + G I A ++ M
Sbjct: 294 AVLR-RSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH +K +LD N +++ I + + RSLF+ P L +NT+I Y++
Sbjct: 192 QQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTP-ERNLITWNTMIAGYSQ 250
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ +++L EM P+ FT + AC + G VH + + D +
Sbjct: 251 CD-PLMALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQM 306
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN L+ MY+ C I AK VF+ M +D SW+SMIAG+ ++A+++F M A
Sbjct: 307 GNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGV 366
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVN--GLELDVALGTALVEMYSKCGHVEKA 256
P+ V +SL+S+C+ V G + +++N L+ + + ++V + ++ G + +A
Sbjct: 367 HPDHVVFLSLISSCSHAGLVDEGWNFFR-SMINEYNLQPNKEVYGSVVNLLARAGRLREA 425
Query: 257 FKVFNLM 263
+ + M
Sbjct: 426 LDLIDTM 432
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 250/459 (54%), Gaps = 21/459 (4%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLS----ISLHFTRSLFNNL 60
H+ +LI T+ L Q+ +KT+ +NT +I++FI S S+ LF+ +
Sbjct: 28 HLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQI 87
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P + +NT+ R YA+ + + I F L+ + VKA + G
Sbjct: 88 -TQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSK---------VKA------LAEG 131
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+H K+G+ + Y+ TL+ MY AC +ID ++ VF+++ VV+++++I
Sbjct: 132 KQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARN 191
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
+ ++AL +F ++ P VT++ ++S+C L ++ G +H Y G + V +
Sbjct: 192 NRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVN 251
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
T L++MY+KCG ++ A VF M +++ Q+W+ +I A +G G AIS+ +M + ++
Sbjct: 252 TTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQ 311
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
PD I+F IL ACSH GLV+EG YF M Y I P+++HYGCMVD+LGRAG ++EAY
Sbjct: 312 PDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYK 371
Query: 361 IIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSG 420
I +P +P ++ R+ L AC HG V + + + + +L+ G +YV+ +++ + G
Sbjct: 372 FIDELPIKPTPILWRTLLSACSTHGNV-EMGKRVIERIFELDDSHGGDYVIFSNLCARYG 430
Query: 421 NWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
WD L + KG K+PGCS ++VN+ E + E
Sbjct: 431 KWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGE 469
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 237/439 (53%), Gaps = 19/439 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-----LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
Q+HT LKT N + S I L L +L R L + ++ +I
Sbjct: 494 QIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL-----KEKDVVSWTAMIAG 548
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
YA+ E++ LF EM G+ DN + + AC + G +H+ G D
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDD 608
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+GN L+ +YA C ++ A F+++ +D +SW+S+I+GF +AL +F +M
Sbjct: 609 LSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSK 668
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A + NS T VSA ++ NV+ G+ IH+ + G + + + L+ +Y+KCG+++
Sbjct: 669 AGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDD 728
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A + F M EKN SW M++G + +G G A+SLF M Q G+ P+ ++F +LSACSH
Sbjct: 729 AERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSH 788
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GLVDEG YF M V+ + P EHY C+VD+LGR+GL+ A + MP +P+A++ R
Sbjct: 789 VGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCR 848
Query: 376 SFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+ L AC H + ++G+ LL+LEP+ A YVL +++ +++G W
Sbjct: 849 TLLSACIVHKNI-----DIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQM 903
Query: 432 INQKGLNKVPGCSWVKVND 450
+ +G+ K PG SW++VN+
Sbjct: 904 MKDRGVKKEPGRSWIEVNN 922
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 171/324 (52%), Gaps = 2/324 (0%)
Query: 63 TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS 122
T + +N ++ AY ES K+F +M G+ P+ FTYP +++ C + +G
Sbjct: 435 TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDS 182
+H+ + K G + Y+ + L+ MYA ++D A +F + +DVVSW++MIAG+ +
Sbjct: 495 IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
++AL +F M+ +++ S +SAC + + G+ IH+ A V+G D+++G A
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNA 614
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV +Y++CG V A+ F+ + K+ SW +ISG A +G A+SLF++M + G + +
Sbjct: 615 LVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEIN 674
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
S +F +SA +++ V GK + + + T E ++ + + G I++A
Sbjct: 675 SFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSET-EVSNVLITLYAKCGNIDDAERQF 733
Query: 363 RNMPTEPNAVILRSFLGACRNHGQ 386
MP E N + + L HG
Sbjct: 734 FEMP-EKNEISWNAMLTGYSQHGH 756
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 174/350 (49%), Gaps = 1/350 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
QLH L LK T + + + + N + +YN+LI ++
Sbjct: 292 QLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
S ++++LF +M L+PD T ++ AC + +G HS K G+ SD +
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
LL +Y C +I A F +VV W+ M+ + D+ +++ K+F +M++ P
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N T S++ C+SL V GE IH+ + G + +V + + L++MY+K G ++ A K+F
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF 531
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
++EK++ SWT MI+G A + + A++LF +M G+ D+I F++ +SAC+ + ++
Sbjct: 532 RRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 591
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
+G+ A V + +V + R G + +AY + ++ N
Sbjct: 592 QGQQ-IHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN 640
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 168/321 (52%), Gaps = 12/321 (3%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ + +F+ L + ++ ++ +++ C E++ LF +M +G+ P + + V+
Sbjct: 221 LNSAKKVFDGLQKRDSV-SWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + +G +H L+ K G + Y+ N L+ +Y+ A+ VF M RD VS
Sbjct: 280 ACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVS 339
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
++S+I+G AL++F +M L P+ VT+ SL+SAC+S+ + G+ HSYA+
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI--SGLADNGRGNYA 287
G+ D+ L AL+++Y KC ++ A + F +N+ W +M+ GL DN N +
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN--LNES 457
Query: 288 ISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGC 344
+F +M G++P+ ++ +IL CS L VD G+ ++ + +N+ +
Sbjct: 458 FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS----SV 513
Query: 345 MVDMLGRAGLIEEAYHIIRNM 365
++DM + G ++ A I R +
Sbjct: 514 LIDMYAKLGKLDHALKIFRRL 534
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 166/332 (50%), Gaps = 27/332 (8%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
++F+ +PV P L +N ++ + + + LF ML+ ++PD TY V++ CG
Sbjct: 124 TVFDEMPVRP-LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG-- 180
Query: 115 LLIGIGGSV--------HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
GG V H+ G ++ ++ N L+ +Y ++ AK VF+ + RD
Sbjct: 181 -----GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRD 235
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VSW +M++G +A+ +F +M + P S++SACT + + GE +H
Sbjct: 236 SVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHG 295
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+ G L+ + ALV +YS+ G+ A +VFN M +++ S+ +ISGL+ G +
Sbjct: 296 LVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDK 355
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----Y 342
A+ LF KM LKPD ++ +++LSACS +G + GK + Y IK M
Sbjct: 356 ALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQF-----HSYAIKAGMSSDIILE 410
Query: 343 GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
G ++D+ + I+ A+ + TE V+L
Sbjct: 411 GALLDLYVKCSDIKTAHEFF--LSTETENVVL 440
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 171/388 (44%), Gaps = 46/388 (11%)
Query: 46 LSISLHFTRSLFNNL----PVTPPLFAYNTLIR-------AYAKTSCSIESIKLFDEMLK 94
++I +F +S+ N + PV F + + AY+ I M +
Sbjct: 3 ITIKTYF-KSIVNKIKQFRPVVSIFFFFQKFLEHNTALSYAYSNDEGEANGINFLHLMEE 61
Query: 95 TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDV 154
G+R ++ TY +++ C G +H I K+G ++ + L+ +Y A ++D
Sbjct: 62 RGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDG 121
Query: 155 AKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC-T 213
A VF+EMPVR + W+ ++ FVA L +F RM P+ T ++ C
Sbjct: 122 AVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG 181
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+ E IH+ + +G E + + L+++Y K G + A KVF+ +++++ SW
Sbjct: 182 GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVA 241
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM---- 329
M+SGL+ +G A+ LF +M +G+ P FS++LSAC+ + G+ +
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 330 ---------------ARVYNIKPTME-----------HYGCMVDMLGRAGLIEEAYHIIR 363
+R+ N P + Y ++ L + G ++A + +
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFK 361
Query: 364 NMPTE---PNAVILRSFLGACRNHGQVL 388
M + P+ V + S L AC + G +L
Sbjct: 362 KMCLDCLKPDCVTVASLLSACSSVGALL 389
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 223/383 (58%), Gaps = 1/383 (0%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+T+I Y S +++++F +L+ ++P+ T V+ AC + +G +H + +
Sbjct: 413 STVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLR 472
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+ Y+ + L+ MYA C +D++ +F +M ++D V+W+SMI+ F P +AL +
Sbjct: 473 NAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDL 532
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M + N+VT+ S +SAC SL + G+ IH + ++ D+ +AL++MY+K
Sbjct: 533 FRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAK 592
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
CG++E A +VF M +KN SW +IS +G ++S +M + G KPD ++F A+
Sbjct: 593 CGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLAL 652
Query: 310 LSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
+SAC+H GLV+EG F M + Y I P MEH+ CMVD+ R+G +++A I +MP +P
Sbjct: 653 ISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKP 712
Query: 370 NAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELM 429
+A I + L ACR H V L D + L KL+P YVL +++++++G WD +++
Sbjct: 713 DAGIWGALLHACRVHRNV-ELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVR 771
Query: 430 VAINQKGLNKVPGCSWVKVNDGS 452
+ + K+PG SWV VN+ S
Sbjct: 772 RLMKDNKILKIPGYSWVDVNNSS 794
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 142/258 (55%), Gaps = 2/258 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+N LIR + ++ + +M PD T P+VVK+C + +G VH
Sbjct: 107 WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRT 166
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
GL SD Y+G+ L++MY+ + A+ F+ MP RD V W+ M+ G++ A
Sbjct: 167 ARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGA 226
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+++F M+++ PN TL +S C + ++ +G +HS AV GLE +VA+ L+ M
Sbjct: 227 VRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSM 286
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KC ++ A+++F L+ +L +W MISG NG + A+ LF M+++G +PDS++
Sbjct: 287 YAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTL 346
Query: 307 SAILSACSHLGLVDEGKN 324
++L A + L + +GK
Sbjct: 347 VSLLPALTDLNGLKQGKE 364
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 4/368 (1%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH+L +K L+ + + + + + L LF LP L +N +I +
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP-RDDLVTWNGMISGCVQN 321
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E++ LF +ML++G RPD+ T ++ A + G VH I + + D ++
Sbjct: 322 GLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLV 381
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ +Y C+++ A+ +++ DVV S++I+G+V AL++F +
Sbjct: 382 SALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIK 441
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN+VT+ S++ AC S+ + G+ IH Y + N E + +AL++MY+KCG ++ + +
Sbjct: 442 PNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYI 501
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K+ +W MIS + NG A+ LF +M G+K ++++ S+ LSAC+ L +
Sbjct: 502 FSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAI 561
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
GK + + IK + ++DM + G +E A + MP + N V S +
Sbjct: 562 YYGKEIHGVIIK-GPIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIIS 619
Query: 380 ACRNHGQV 387
A HG V
Sbjct: 620 AYGAHGLV 627
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 167/317 (52%), Gaps = 4/317 (1%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R F+ +P + +N ++ Y K +++LF M +G P+ T +
Sbjct: 192 LRDARDAFDGMPWRDCVL-WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLS 250
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
C + G +HSL K GL+ + + NTLL MYA C+ +D A +FE +P D+V+
Sbjct: 251 VCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVT 310
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ MI+G V +AL +F M + P+SVTLVSL+ A T L ++ G+ +H Y +
Sbjct: 311 WNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYII 370
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
N + +D L +ALV++Y KC V A +++ R ++ + +ISG NG A+
Sbjct: 371 RNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQ 430
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR-VYNIKPTMEHYGCMVDM 348
+F +++ +KP++++ +++L AC+ + + G+ + R Y K +E ++DM
Sbjct: 431 MFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDM 488
Query: 349 LGRAGLIEEAYHIIRNM 365
+ G ++ +++I M
Sbjct: 489 YAKCGRLDLSHYIFSKM 505
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 43/250 (17%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N++I ++++ E++ LF +M G++ +N T + AC I G +H +I
Sbjct: 513 WNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVII 572
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K + +D + + L+ MYA C +++A VFE MP ++ VSW+S+I+ + A +++
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVS 632
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
HRM+ P+ VT ++L+SAC +
Sbjct: 633 FLHRMQEEGYKPDHVTFLALISAC-----------------------------------A 657
Query: 249 KCGHVEKAFKVFNLMREKNL-----QSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
G VE+ ++F M ++ L + + M+ + +GR + AI A M KPD+
Sbjct: 658 HAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM---PFKPDA 714
Query: 304 ISFSAILSAC 313
+ A+L AC
Sbjct: 715 GIWGALLHAC 724
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 10/259 (3%)
Query: 142 LLRMYAACKEIDVAKAVFEEMP---VRDVVSWSSMIAGFVACDSPSDALKVFHRM--KLA 196
LL MY + A AVF +P + W+ +I GF A S A+ + +M A
Sbjct: 76 LLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPA 135
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
SP++ TL +V +C +L V G +H A GL DV +G+AL++MYS G + A
Sbjct: 136 APSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDA 195
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
F+ M ++ W +M+ G G A+ LF M +G +P+ + + LS C+
Sbjct: 196 RDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAE 255
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ G +A ++ + ++ M + +++A+ + +P + + V
Sbjct: 256 ADLLSGVQ-LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD-DLVTWNG 313
Query: 377 FLGACRNHGQVLYLDDNLG 395
+ C +G LD+ LG
Sbjct: 314 MISGCVQNG---LLDEALG 329
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD---VALGTALVEM 246
F ++ + ++ L++L+ C S ++ G IH+ AVV+G + +AL T L+ M
Sbjct: 20 FSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGM 79
Query: 247 YSKCGHVEKAFKVFNLMREKNLQS---WTIMISGLADNGRGNYAISLFAKMIQ--TGLKP 301
Y A VF+ + S W +I G G + A+ + KM P
Sbjct: 80 YVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSP 139
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D+ + ++ +C+ LG V G+ AR + + ++ M AGL+ +A
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGR-LVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198
Query: 362 IRNMP 366
MP
Sbjct: 199 FDGMP 203
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 253/468 (54%), Gaps = 42/468 (8%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
Q+ + L L +F+ SL H L + +L + RS+F+ + V + ++N
Sbjct: 573 QMHNHITKLGLLSDIFVSNSLIH---------LYAACGNLCYARSVFDEM-VVKDVVSWN 622
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+LI Y++ + + + LF M G++ D T VV AC R + + I
Sbjct: 623 SLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDY 682
Query: 131 GLDSDKYIGNTL-------------------------------LRMYAACKEIDVAKAVF 159
++ D Y+GNTL + YA ++I A+ +F
Sbjct: 683 CIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIF 742
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+++P +D++SWSSMI+G+ + SDAL++F +M+ A P+++ + S+VS+C L +
Sbjct: 743 DQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALD 802
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G+ +H Y N ++ D + +L++MY KCG ++A +VF M+EK+ SW +I GLA
Sbjct: 803 LGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLA 862
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+NG +++LF M+ G +P+ ++F +L AC++ LV+EG ++F+ M R+Y+++P M
Sbjct: 863 NNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQM 922
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+HYGC+VD+LGRAG +E+A I MP +P+ V+ R LG+C HG V + + + K L
Sbjct: 923 KHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVA-IAEIVTKKLN 981
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
+LEP NY L ++ + + W A + + + K PGCS V+
Sbjct: 982 ELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 217/394 (55%), Gaps = 49/394 (12%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG-- 112
+F+ P TP ++ L++AY+ ++++LF + D + + F +KAC
Sbjct: 49 QVFDRRP-TP----WHALLKAYSHGPHPQDALQLFRHA-RWHAADDTYAFTFALKACAGL 102
Query: 113 ---RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK------------------- 150
RC + +H L+ + G + Y+ L+ +Y C
Sbjct: 103 GWPRCCM-----QLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVS 157
Query: 151 ------------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
E++ A+ +FE MP R+VVSWS MI G+ P +A+ +F RM
Sbjct: 158 WNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGI 217
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
SP+ +T++++V A +++ + GE++H Y GL DV +G +L+++Y+K G ++ + +
Sbjct: 218 SPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLR 277
Query: 259 VFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF+ ++ +NL SWT +ISG A +G A+ LFA M + G++P+ I+F ++L ACSH G
Sbjct: 278 VFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGG 337
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV++G +F M YNI P ++H+GC++DMLGRAG + EA IIR+ P E NA + R+
Sbjct: 338 LVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTL 397
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
LG C +G+V + + K +L LE E G ++V+
Sbjct: 398 LGCCSKYGEV-EMGERTMKKILALEREFGGDFVV 430
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 210/401 (52%), Gaps = 38/401 (9%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+ +LH ++ + L + +S+ +L S +I L F +F+ + P F +N LIR
Sbjct: 469 IKRLHAYYIVSGLYNCHYAMSK-VLRSYAILQPDLVFAHKVFDQIE-APTTFLWNILIRG 526
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
A++ ++I + + G+ PDN T+PF++KAC R + G +H+ I K+GL SD
Sbjct: 527 LAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSD 586
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
++ N+L+ +YAAC + A++VF+EM V+DVVSW+S+I G+ C+ D L +F M+
Sbjct: 587 IFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQN 646
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
+ VT++ +VSACT L + + + Y +E+DV LG LV+ + + G ++
Sbjct: 647 EGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQS 706
Query: 256 AFKVFNLMR-------------------------------EKNLQSWTIMISGLADNGRG 284
A KVF M+ +K+L SW+ MISG +
Sbjct: 707 AEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHF 766
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
+ A+ +F +M + +KPD+I ++++S+C+HLG +D GK + E R NIK
Sbjct: 767 SDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGK-WVHEYVRRNNIKADTIMENS 825
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
++DM + G +EA + + M E + + S + N+G
Sbjct: 826 LIDMYMKCGSAKEALQVFKEM-KEKDTLSWNSIIIGLANNG 865
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+ + R LF +P + +++ +I Y + +E++ LF M+ G+ P T VV
Sbjct: 170 EVEYARLLFERMPCRN-VVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVV 228
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDV 167
A I IG ++H K GL D +GN+L+ +YA I + VF+EM R++
Sbjct: 229 PALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNL 288
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+S+I+GF A+++F M+ A PN +T +S++ AC+ V G +
Sbjct: 289 VSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKS 348
Query: 228 AVVN-GLELDVALGTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNG 282
+ + DV +++M + G + +A ++ + E N W ++ + G
Sbjct: 349 MIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYG 405
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 141/316 (44%), Gaps = 37/316 (11%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + +F+ + L ++ ++I +A S+++++LF +M + G+RP+ T+ V+
Sbjct: 271 SIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVL 330
Query: 109 KACGRCLLIGIG-GSVHSLIFKVGLDSD-KYIGNTLLRMYAACKEIDVAKAVFEEMPVR- 165
AC L+ G S+I++ ++ D K+ G ++ M + A+ + + PV
Sbjct: 331 HACSHGGLVEQGVAFFKSMIYEYNINPDVKHFG-CIIDMLGRAGRLREAEQIIRDFPVEV 389
Query: 166 DVVSWSSMIAGFVACDSPSDALKVFHR-MK--LANESPNSVTLVSLVSACTSL------- 215
+ W +++ C S +++ R MK LA E V L + T L
Sbjct: 390 NATVWRTLLG----CCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAE 445
Query: 216 ------------------INVRAGESIHSYAVVNGL-ELDVALGTALVEMYSKCGHVEKA 256
+ + A + +H+Y +V+GL A+ L + A
Sbjct: 446 IVRKLVDQRNSVKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFA 505
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
KVF+ + W I+I GLA + AI+ + K G+ PD+++F IL AC+ +
Sbjct: 506 HKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARI 565
Query: 317 GLVDEGKNYFDEMARV 332
++EG+ + + ++
Sbjct: 566 NALNEGEQMHNHITKL 581
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 238/441 (53%), Gaps = 14/441 (3%)
Query: 13 SKTVHHLHQLHTLFLKTSLD------HNTCIISRFILTSLSISLHFTRSLFNNLPVTPPL 66
S+++ QLH LK L HN +I+ + T L + F+ +F+ P
Sbjct: 38 SRSLRQGLQLHAHILKFGLQTIPLVSHN--LINLYSKTQLPL---FSLQVFDETPKKSST 92
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++++I A+A+ + +++ F ML G+RPD+ YP KACG +G SVH L
Sbjct: 93 -TWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCL 151
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K G D ++G++L+ MYA C EI A+ +F+EMP R+VVSWS MI G+ D +A
Sbjct: 152 AVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEA 211
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F + + + N T S++ C+S + G+ IH + + +G+AL+ +
Sbjct: 212 LTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG +E A++VF+ + +NL W M+ A + LF +M G+KP+ I F
Sbjct: 272 YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXF 331
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++L ACSH GLV++G+ YF M R Y I+P EHY +VD+LGRAG ++EA +I+ MP
Sbjct: 332 LSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMP 390
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P + + L CR H + + +L+++ +VL ++ + +G ++ AA
Sbjct: 391 MRPTESVWGALLTGCRIHKDT-EMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAA 449
Query: 427 ELMVAINQKGLNKVPGCSWVK 447
+ + +G+ K G SWV+
Sbjct: 450 RMRKMLRDRGVKKETGLSWVE 470
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N + +L+ + T ++R G +H++ + GL+ + L+ +YSK + +VF
Sbjct: 24 NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ +K+ +W+ +IS A N A+ F +M+ G++PD + + AC L D
Sbjct: 84 DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143
Query: 321 EGKNYFDEMARVYNIKPTMEHY------GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
GK+ V+ + +Y +VDM + G I +A H+ MP E N V
Sbjct: 144 VGKS-------VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVV-- 193
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLL 399
S+ G + Q LDD + L L
Sbjct: 194 -SWSGMIYGYAQ---LDDGVEALTL 214
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 247/446 (55%), Gaps = 12/446 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H +K +D N I + I + + + S F +P L ++ T+I YA+
Sbjct: 373 EVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLISWTTIIAGYAQN 431
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
C ++++ L ++ + D ++ AC + +H + K GL +D I
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQ 490
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N ++ +Y +D A+ VFE + +D+VSW+SMI V +AL++F+ + N
Sbjct: 491 NAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIE 550
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ +TLVS++ A +L +++ G+ IH + + G L+ + +LV+MY++CG +E A +
Sbjct: 551 PDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNI 610
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
FN +++++L WT MI+ +G G AI LF+KM + PD I+F A+L ACSH GLV
Sbjct: 611 FNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLV 670
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EGK +F+ M Y ++P EHY C+VD+L R+ +EEAYH +RNMP EP+A + + LG
Sbjct: 671 VEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLG 730
Query: 380 ACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
ACR H +++LG K LL+L E NYVL ++ + G W+ E+ +
Sbjct: 731 ACRIHS-----NNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785
Query: 436 GLNKVPGCSWVKVNDGSAEEMSKETA 461
L K PGCSW++V + M+++ +
Sbjct: 786 KLKKKPGCSWIEVENKIHTFMARDKS 811
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 188/342 (54%), Gaps = 10/342 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++N++I A+ S+E++ LF M + G+ + +T+ ++AC I IG +H++I
Sbjct: 218 SWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVI 277
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K +D Y+ N L+ MYA C +++ A+ VF+ M +D VSW+++++G V D SDA+
Sbjct: 278 LKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAI 337
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
F M+ + + P+ V+++++++A N+ AG +H+YA+ +G++ ++ +G +L++MY
Sbjct: 338 NHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMY 397
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KC V+ F M EK+L SWT +I+G A N A++L K+ + D +
Sbjct: 398 GKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG 457
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH---YGCMVDMLGRAGLIEEAYHIIRN 364
+IL ACS L + + E+ Y +K + +V++ G L++ A H+ +
Sbjct: 458 SILLACSGL----KSEKLIKEI-HGYVLKGGLADILIQNAIVNVYGELALVDYARHVFES 512
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL-LKLEPEL 405
+ ++ + V S + C ++G + + L+ +EP+L
Sbjct: 513 INSK-DIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDL 553
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 173/360 (48%), Gaps = 8/360 (2%)
Query: 14 KTVHHLHQLHTLFLKTS--LDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K + QLH FLKT LD + + ++F+ + S + +F+ + +F +N
Sbjct: 60 KALPQGQQLHAHFLKTQNYLD-SVFLDTKFVHMYGKCGSFYDAVKVFDKMS-ERTIFTWN 117
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I A +E+I+L+ EM G+ D FT+P V+KACG +G +H + K
Sbjct: 118 AMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKC 177
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEE--MPVRDVVSWSSMIAGFVACDSPSDALK 188
G ++ N L+ MYA C ++ A+ +F+ M D VSW+S+I+ V +AL
Sbjct: 178 GYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALS 237
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F RM+ N+ T VS + AC ++ G IH+ + + DV + AL+ MY+
Sbjct: 238 LFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYA 297
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
CG +E A +VF M K+ SW ++SG+ N + AI+ F M +G KPD +S
Sbjct: 298 NCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLN 357
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+++A + G A + I M ++DM G+ ++ MP +
Sbjct: 358 MIAASGRSANLLAGME-VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK 416
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 249/433 (57%), Gaps = 4/433 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L +LH LK +N + + F+ + SL + + +F+ + + + ++N LI +A
Sbjct: 164 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHA 222
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+++ S+ +M +GL PD+FT ++ AC + + +G VH I + L+ D +
Sbjct: 223 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 282
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ ++L +Y C E+ +A+F+ M + +VSW+++I G++ P AL VF +M L
Sbjct: 283 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 342
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
++++ + AC+ L ++R G H+YA+ + LE D + +L++MY+K G + ++
Sbjct: 343 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 402
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
KVFN ++EK+ SW MI G +G AI LF +M +TG PD ++F +L+AC+H G
Sbjct: 403 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 462
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII-RNMPTEPNAVILRS 376
L+ EG Y D+M + +KP ++HY C++DMLGRAG +++A ++ M E + I +S
Sbjct: 463 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 522
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L +CR H Q L + + + L +LEPE NYVL +++ + G W+ ++ +N+
Sbjct: 523 LLSSCRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 581
Query: 437 LNKVPGCSWVKVN 449
L K GCSW+++N
Sbjct: 582 LRKDAGCSWIELN 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 6/262 (2%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKT----GLRPDNFTYPFVVKACGRCLLIGIGGSV 123
++N++IR ++ S ES L EM++ PD T V+ C R IG+G V
Sbjct: 5 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 64
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H K+ LD + + N L+ MY+ C I A+ +F+ ++VVSW++M+ GF A
Sbjct: 65 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 124
Query: 184 SDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
V +M E + VT+++ V C + + + +H Y++ + +
Sbjct: 125 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 184
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
A V Y+KCG + A +VF+ +R K + SW +I G A + ++ +M +GL P
Sbjct: 185 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 244
Query: 302 DSISFSAILSACSHLGLVDEGK 323
DS + ++LSACS L + GK
Sbjct: 245 DSFTVCSLLSACSKLKSLRLGK 266
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 165 RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES----PNSVTLVSLVSACTSLINVRA 220
R+ VSW+SMI F ++ + M N P+ TLV+++ C +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G+ +H +AV L+ ++ L AL++MYSKCG + A +F + KN+ SW M+ G +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 281 NGRGNYAISLFAKMIQTG--LKPDSISFSAILSACSH 315
G + + +M+ G +K D ++ + C H
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 157
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 234/435 (53%), Gaps = 15/435 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH + ++ +D +++ I SL+ + R LF+ L ++ ++I YA+
Sbjct: 91 LHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWTSMIAGYARW 150
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++LF MLK G+ F + AC + + +G +H K LD + +
Sbjct: 151 GQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVV 210
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ MY C I A+++F+ P R++++W++MIAG+ CD P AL++ M N+
Sbjct: 211 NSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMALQLLLEM---NDE 266
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN TL S+ SAC L +R G+ +H + D+ +G ALV+MYSKCG + A V
Sbjct: 267 PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNV 326
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K+ SWT MI+G NG GN A+ LF+ MI G+ PD + F +++S+CSH GLV
Sbjct: 327 FDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLV 386
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
DEG N+F M YN++P E YG +V++L RAG + EA +I MP P+ + + LG
Sbjct: 387 DEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLG 446
Query: 380 ACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQK 435
A + H V +G+L + ++ P+ NY++ AS+ + W A ++
Sbjct: 447 ASKMHNNV-----EMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSLRGI 501
Query: 436 GLNKVPGCSWVKVND 450
G K G SW++V D
Sbjct: 502 GSRKEAGISWIEVMD 516
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 159/338 (47%), Gaps = 11/338 (3%)
Query: 30 SLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF 89
S H T +IS L S H R+LF+ +P + A+ ++ YA E++ +F
Sbjct: 2 SQKHATTLISS--LCSRGAVCH-ARALFDEMP-ERDVVAWTAMLSGYASNGLRREALDVF 57
Query: 90 DEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC 149
M+ G P+ +T V+ AC + +H++ + G+D Y+ N L+ YA+
Sbjct: 58 RRMVAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASL 117
Query: 150 KEIDV-AKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
E V A+ +F+ + R SW+SMIAG+ L++F M ++
Sbjct: 118 AEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSI 177
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
+ ACT +I++ G+ +H + L++++A+ +L++MY C + A +F+ E+N
Sbjct: 178 ALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERN 237
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
L +W MI+G + + +++ +P+ + ++I SAC+ L + GK
Sbjct: 238 LITWNTMIAGYSQCD----PLMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHG 293
Query: 328 EMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ R + ++ +VDM + G I A ++ M
Sbjct: 294 AVLR-RSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH +K +LD N +++ I + + RSLF+ P L +NT+I Y++
Sbjct: 192 QQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTP-ERNLITWNTMIAGYSQ 250
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
+ +++L EM P+ FT + AC + G VH + + D +
Sbjct: 251 CD-PLMALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQM 306
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN L+ MY+ C I AK VF+ M +D SW+SMIAG+ ++A+++F M A
Sbjct: 307 GNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGV 366
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVN--GLELDVALGTALVEMYSKCGHVEKA 256
P+ V +SL+S+C+ V G + +++N L+ + + ++V + ++ G + +A
Sbjct: 367 HPDHVVFLSLISSCSHAGLVDEGWNFFR-SMINEYNLQPNKEVYGSVVNLLARAGRLREA 425
Query: 257 FKVFNLM 263
+ + M
Sbjct: 426 LDLIDTM 432
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 230/439 (52%), Gaps = 32/439 (7%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-----LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
Q+HT LKT N + S I L +L R L N V+ + +I
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVS-----WTAMIAG 513
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
Y + E++ LF EM G++ DN + + AC + G +H+ G D
Sbjct: 514 YTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDD 573
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
IGN L+ +YA C ++ A A F+++ +D VSW+S+++GF +AL +F +M
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNK 633
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A NS T S VSA ++ NVR G+ IH G + + + AL+ +Y+KCG ++
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
SW MI+G + +G G A+ LF M Q + P+ ++F +LSACSH
Sbjct: 694 I-------------SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 740
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+GLVDEG +YF M+ +N+ P EHY C+VD+LGR+GL+ A + MP +P+A++ R
Sbjct: 741 VGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWR 800
Query: 376 SFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+ L AC H + ++G+ LL+LEP+ A YVL +++ ++SG WD
Sbjct: 801 TLLSACNVHKNI-----DIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQM 855
Query: 432 INQKGLNKVPGCSWVKVND 450
+ +G+ K PG SWV+V++
Sbjct: 856 MKDRGVKKEPGRSWVEVDN 874
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 22/325 (6%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
+S ++F +M G+ P+ FTYP ++K C +G +H+ + K G + Y+ + L+
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 144 RMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
MYA ++D A +F + DVVSW++MIAG+ D ++AL +F M+ +++
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
S +SAC + + G IH+ + ++G D+++G ALV +Y++CG V +A+ F+ +
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 600
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
K+ SW ++SG A +G A+++FA+M + GL+ +S +F + +SA +++ V GK
Sbjct: 601 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGK 660
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA---------------------YHII 362
M R E ++ + + G I++ + +
Sbjct: 661 Q-IHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDM 719
Query: 363 RNMPTEPNAVILRSFLGACRNHGQV 387
+ + PN V L AC + G V
Sbjct: 720 KQLDVLPNHVTFVGVLSACSHVGLV 744
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 166/351 (47%), Gaps = 18/351 (5%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L LK T + + + L S S +L +F+ + + +YN+LI A+
Sbjct: 272 QLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV-SYNSLISGLAQQ 330
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
++ LF +M +PD T ++ AC + G HS K G+ SD +
Sbjct: 331 GYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVE 390
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+LL +Y C +I A F + D+ + + ++F +M++
Sbjct: 391 GSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIV 435
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN T S++ CT+L GE IH+ + G + +V + + L++MY+K G ++ A K+
Sbjct: 436 PNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKI 495
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F ++E ++ SWT MI+G + + A++LF +M G+K D+I F++ +SAC+ + +
Sbjct: 496 FRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQAL 555
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
D+G+ + + + +V + R G + EAY + + N
Sbjct: 556 DQGRQIHAQSC-LSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN 605
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 132/262 (50%), Gaps = 22/262 (8%)
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
V+ AC + G +H L+ K G S+ Y+ N L+ +Y+ + A+ +F M RD
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
VS++S+I+G + AL +F +M L + P+ VT+ SL+SAC S+ + G+ HS
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
YA+ G+ D+ + +L+++Y KC ++ A + F + G DN N
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLDN--LNK 421
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYG 343
+ +F +M G+ P+ ++ +IL C+ LG D G+ ++ + +N+ +
Sbjct: 422 SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS----S 477
Query: 344 CMVDMLGRAGLIEEAYHIIRNM 365
++DM + G ++ A I R +
Sbjct: 478 VLIDMYAKHGKLDHALKIFRRL 499
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
Y G L+ Y A +++ A VF+EMP+R + W+ + F+A +F RM
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 197 NESPNSVTLVSLVSACT-SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
N + ++ C+ + ++ R E IH+ + +G E + L+++Y K G +
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------------------- 295
A KVF ++ ++ SW MISGL+ NG A+ LF +++
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLV 277
Query: 296 -QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+ G ++ +A+++ S G + + F M++ + Y ++ L + G
Sbjct: 278 LKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS-----YNSLISGLAQQGY 332
Query: 355 IEEAYHIIRNMP---TEPNAVILRSFLGACRNHG 385
I A + + M +P+ V + S L AC + G
Sbjct: 333 INRALALFKKMNLDCQKPDCVTVASLLSACASVG 366
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 239/425 (56%), Gaps = 4/425 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L +K LD + + + + + ++ + +F+ +PV + + L++ Y K S
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVL-WGVLMKGYLKYS 189
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL-IFKVGLDSDKYIG 139
E +LF M TGL D T +VKACG G VH L I + +D Y+
Sbjct: 190 KDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLE 249
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+++ MY C+ +D A+ +FE R+VV W+++I+GF C+ +A+ +F +M +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESIL 309
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN TL +++ +C+SL ++R G+S+H Y + NG+E+D T+ ++ Y++CG+++ A KV
Sbjct: 310 PNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKV 369
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F++M ++N+ SW+ MI+ NG A+ F M L P+S++F ++LSACSH G V
Sbjct: 370 FDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNV 429
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG F+ M R Y + P EHY CMVD+LGRAG I EA I NMP +P A + L
Sbjct: 430 KEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H +V L + + LL +EP+ + YVL +++ + +G W+ + + KG K
Sbjct: 490 ACRIHKEV-DLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGYRK 548
Query: 440 VPGCS 444
G S
Sbjct: 549 PMGLS 553
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 206/423 (48%), Gaps = 38/423 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLP 61
+R + +++ +KT+HH Q+H + + S + S L F + F+ +P
Sbjct: 7 NRALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIP 66
Query: 62 VTPP-LFAYNTLIRAYAKT-SCSIESIKL-FDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
++NT++ Y+K+ SC + L ++ M + D+F F +KAC L+
Sbjct: 67 CWKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H L K GLD D Y+ +L+ MYA ++ A+ VF+EMPVR+ V W ++ G++
Sbjct: 127 NGMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYL 186
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDV 237
S+ ++F+ M+ + +++TL+ LV AC ++ + G+ +H ++ ++
Sbjct: 187 KYSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSG 246
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
L ++++MY KC ++ A K+F E+N+ WT +ISG A R AI LF +M+
Sbjct: 247 YLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGE 306
Query: 298 GLKPDSISFSAILSACSHLGLVDEGK-------------------NYFDEMARVYNI--- 335
+ P+ + +AIL +CS LG + GK ++ D AR NI
Sbjct: 307 SILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMA 366
Query: 336 --------KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGACRNH 384
K + + M++ G GL EEA NM ++ PN+V S L AC +
Sbjct: 367 RKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHS 426
Query: 385 GQV 387
G V
Sbjct: 427 GNV 429
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 238/431 (55%), Gaps = 17/431 (3%)
Query: 22 LHTLFLKTSLDHNTCIISRF--ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
H+L +K L+ + + + T L SL +F +P+ + + +I+ Y
Sbjct: 84 FHSLAIKLRLEGDPYVAPALMNVYTELG-SLEEAHKVFEEVPLKNSVI-WGVMIKGYLNF 141
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
S +LF M ++G D F +++ACG G + H L F G
Sbjct: 142 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSGY------- 194
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+Y +D A +FE + RBVV WS++IAGF +++ +F +M + +
Sbjct: 195 -----VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLADSVT 249
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PNSVT S+V AC+SL +++ G S+H Y + NG+ELDV T+ ++MY+KCG + A++V
Sbjct: 250 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRV 309
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F + EKN+ SW+ MI+G +G A++LF +M P+S++F ++LSACSH G +
Sbjct: 310 FCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI 369
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
+EG ++F M+R Y I P EHY CMVD+LGRAG I+EA I NMPTEP A + LG
Sbjct: 370 EEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLG 429
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H + L + + K LL LE + YV+ +++ + G W+ + + + +KGL K
Sbjct: 430 ACRIHRRA-ELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGLLK 488
Query: 440 VPGCSWVKVND 450
+ G + +++ +
Sbjct: 489 IVGFTSIEIKE 499
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 168/337 (49%), Gaps = 15/337 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SLH FN++ L ++NT++ +++K C + ++LF MLK G D+F F V
Sbjct: 11 SLHVASKAFNHITF-ENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAV 69
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC L HSL K+ L+ D Y+ L+ +Y ++ A VFEE+P+++ V
Sbjct: 70 KACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSV 129
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W MI G++ ++F RM+ + + + L+ AC ++ + G++ H
Sbjct: 130 IWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLY 189
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+G +Y G ++ A +F + +B+ W+ +I+G A NGR +I
Sbjct: 190 FSSGY------------VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESI 237
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
S+F +M+ + P+S++F++I+ ACS LG + +G++ M R ++ +++Y +DM
Sbjct: 238 SMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIR-NGVELDVKNYTSFIDM 296
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ G I AY + +P E N + + HG
Sbjct: 297 YAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMHG 332
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y + VA F + ++ SW++++A D L++F RM + +S L
Sbjct: 6 YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 65
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
V V AC L + + HS A+ LE D + AL+ +Y++ G +E+A KVF +
Sbjct: 66 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 125
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
KN W +MI G + LF++M ++G + D ++ AC ++ EGK +
Sbjct: 126 KNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 185
Query: 326 ---FDEMARVYNIKPTMEH---------------YGCMVDMLGRAGLIEEAYHIIRNMPT 367
+ VY ++ ++ + ++ R G E+ + R M
Sbjct: 186 HGLYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLA 245
Query: 368 E---PNAVILRSFLGACRNHGQV 387
+ PN+V S + AC + G +
Sbjct: 246 DSVTPNSVTFASIVLACSSLGSL 268
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 234/390 (60%), Gaps = 13/390 (3%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +N++I + + ++K+F M +G+ PD T + A + S+H
Sbjct: 235 LVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHC 294
Query: 126 LIFKVGLDSDKYI-GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + G D D I GN ++ MYA I+ A+ +F+ MPV+D VSW+++I G++ +
Sbjct: 295 YVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLAN 354
Query: 185 DALKVFHRMKLANESPNSV--TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+A++ + M+ +E ++ T VS++ A + L ++ G +H+ ++ GL +DV +GT
Sbjct: 355 EAVERYGHMQ-KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTC 413
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L+++Y+KCG + +A +F M ++ W +ISGL +G G A++LF++M Q G+KPD
Sbjct: 414 LIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPD 473
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
++F ++L+ACSH GLVD+G+++FD M Y+I P +HY CM DMLGRAG ++EA++ I
Sbjct: 474 HVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFI 533
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSL 418
+NMP +P++ + + LGACR HG V +GK+ L +L+PE YVL +++ +
Sbjct: 534 QNMPIKPDSAVWGALLGACRIHGNV-----EMGKVASQNLFELDPENVGYYVLMSNMYAK 588
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
G WD E+ + ++ L K PG S ++V
Sbjct: 589 VGKWDGVDEVRSLVRRQNLQKTPGWSSIEV 618
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 153/303 (50%), Gaps = 8/303 (2%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
NTLI A+++ + + L +L RPD FT+P +++A +H+
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSN---ASAAQLHACA 93
Query: 128 FKVGL-DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
++GL + +L+ Y I A VF+EM RDV +W++M++G ++A
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ +F RM + ++VT+ S++ C L + +H YAV +GL+ ++ + AL+++
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y K G +E+A VF+ M ++L +W +ISG G+ A+ +F M +G+ PD ++
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 307 SAILSACSHLGLVDEGKN-YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++ SA + G K+ + M R +++ + +VDM + IE A + +M
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDSM 332
Query: 366 PTE 368
P +
Sbjct: 333 PVQ 335
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 233/406 (57%), Gaps = 7/406 (1%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
+L I H R+ N L P F +N +IR+Y + ++ ++ +ML+ G+ PD
Sbjct: 202 VLELYQIHAHVLRT--NMLENHPSSFYWNIIIRSYTRLEVPRIALFVYIDMLRAGILPDC 259
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
+T P V KA +G +HS+ ++G + D+Y + L+ +Y+ +++ A VFE+
Sbjct: 260 YTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSKIGDLECACKVFEQ 319
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
R + SW+++IAG +A+ +F +++ + P+ T+VS+ SAC SL N+
Sbjct: 320 NHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSVTSACGSLGNLELS 379
Query: 222 ESIHSYAV---VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+H + V G + ++ + +L++MY KCG ++ A KVF+ M +N+ SWT +I G
Sbjct: 380 LQMHKFVFQVKVTG-KSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHRNVSSWTSLIVGY 438
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ A+ F M + G+ P+ ++F +LSAC H G+++EGK+YFD M VY KP
Sbjct: 439 AMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQ 498
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+ HYGCMVD+L +AGL+EEA +I MP + N++I +G C HG V + + GK L
Sbjct: 499 LPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNV-EIGEWAGKHL 557
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+LEP YV+ +++ + +G W A ++ + Q+ L KVPG S
Sbjct: 558 QELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYS 603
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 221/396 (55%), Gaps = 41/396 (10%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
TR +F+ + V + ++NT+I YA E+ +LFDEM + L
Sbjct: 85 TRMVFDRM-VCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNL--------------- 128
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
N++L + C ++ A +F EMP RDVVSW+S
Sbjct: 129 ------------------------VSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNS 164
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
M+A + C P++AL +F +M+ P T+VSL+SAC L + G +H+Y N
Sbjct: 165 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 224
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+E++ +GTALV+MY+KCG + A +VFN M K++ +W +I+G+A +G A LF
Sbjct: 225 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFK 284
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + ++P+ I+F A+LSACSH G+VDEG+ D M+ Y I+P +EHY C++D+L RA
Sbjct: 285 EMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARA 344
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLA 412
GL+EEA +I MP EPN L + LG CR HG L + +GK L+ L+P Y+L
Sbjct: 345 GLLEEAMELIGTMPMEPNPSALGALLGGCRIHGN-FELGEMVGKRLINLQPCHSGRYILL 403
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+++ + + WD A ++ + G++KVPG S +++
Sbjct: 404 SNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 439
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 40/301 (13%)
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
TYPFV+KAC + G VH+ + K G + D YI N+L+ +YA K++ AK +F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
RDVVSW++MI G+V VF RM C +I+
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM-----------------VCRDVISWNT- 102
Query: 222 ESIHSYAVVNGL-----------ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
I+ YA+V + E ++ +++ + KCG+VE+AF +F+ M +++ S
Sbjct: 103 -IINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVS 161
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYF---- 326
W M++ A G+ N A++LF +M G+KP + ++LSAC+HLG +D+G +
Sbjct: 162 WNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN 221
Query: 327 DEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
D V +I T +VDM + G I A + M ++ + + + + HG
Sbjct: 222 DNRIEVNSIVGT-----ALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGH 275
Query: 387 V 387
V
Sbjct: 276 V 276
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 233/412 (56%), Gaps = 17/412 (4%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R +F+ PV +F +N +++A A E++ +M + G+ D+++Y +
Sbjct: 299 ALPAARQVFDEAPVKN-IFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGL 357
Query: 109 KACGRCLLIGIGGS-----VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
KAC + S +H+ + G ++ TL+ YA + A+ VF MP
Sbjct: 358 KACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMP 417
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAG 221
R++VSWS+MI + + P DA+++F M ++ PNS+T+VS++ AC + + G
Sbjct: 418 DRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQG 477
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLAD 280
+ +H+Y + G +L V++ AL+ MY KCG +E +FN + R +N+ SW +ISG
Sbjct: 478 KVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGM 537
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G G ++ +F +MI+ G+ P+ I+F ++L ACSH+GLV++GK F+ M YN+ P E
Sbjct: 538 HGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAE 596
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
HY CMVD+LGRAG ++EA +I++M +P+ + S LGACR HG V Y + L
Sbjct: 597 HYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSH-LFD 655
Query: 401 LEPELGANYVLAASV---SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
LEP NYVL A + + L D EL+ + L KVPGCSW++V
Sbjct: 656 LEPRNAGNYVLLADIYARAKLQNQVDVLKELL---EEHALEKVPGCSWIEVK 704
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 164/392 (41%), Gaps = 54/392 (13%)
Query: 99 PDNFTYPFVVKACGRCLLIGIGGSVHS-LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKA 157
P TY ++ A R + +VH L SD ++ L+ YAA + A+
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL-- 215
VF+E PV+++ W++M+ D +AL M +S + + AC +
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASA 365
Query: 216 ----INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
+ R E +H++A+ G L + T L++ Y+K G V A +VF M ++NL SW
Sbjct: 366 SHLPASARVRE-MHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSW 424
Query: 272 TIMISGLADNGRGNYAISLFAKMIQT--GLKPDSISFSAILSACSHLGLVDEGK------ 323
+ MI A N R AI +F +M+ + L P+SI+ ++L AC+ + + +GK
Sbjct: 425 SAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYI 484
Query: 324 --NYFDEMARVYNIKPTME-HYGCM------VDMLGRA----------------GLIEEA 358
FD + V N M GC+ + +GR G E+
Sbjct: 485 LRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRES 544
Query: 359 YHIIRNMPTE---PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL-----GANYV 410
+ M E PN + S LGAC + G V GK L + E +Y
Sbjct: 545 LQVFEEMIEEGISPNIITFVSVLGACSHVGLV-----EQGKKLFESMVEYNVTPRAEHYA 599
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
+ +G D A EL+ ++ + +V G
Sbjct: 600 CMVDLLGRAGRLDEAVELIQSMRIQPSPQVWG 631
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA------LGTALVEMYSKCGH 252
+P T SL+ L RA ++ + AV LE D L T L+E Y+
Sbjct: 245 APTQRTYESLL-----LAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSA 299
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+ A +VF+ KN+ W M+ LA G A++ A M + G+ DS S++ L A
Sbjct: 300 LPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKA 359
Query: 313 CSHLGLVDEGKNYFDEMARVYNI--KPTMEHYG-------CMVDMLGRAGLIEEAYHIIR 363
C + ++ ARV + YG ++D + G++ A +
Sbjct: 360 C-----IAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFT 414
Query: 364 NMP 366
+MP
Sbjct: 415 SMP 417
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/455 (32%), Positives = 254/455 (55%), Gaps = 22/455 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSL------DHNTCIISRFILTSLSISLHFTRSLFNN 59
++++IQ T+ H+ Q+ L T T ++ L+ L + + +
Sbjct: 4 MDSIIQKCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLEHCALSPSPAYLPYAAHIHRH 63
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P +N L+R A+ ++ L T L PD T+ F + A R L +
Sbjct: 64 IP-HPSTNDFNALLRGLARGPHPTHALTF----LSTILHPDALTFSFSLIASARALALSE 118
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+HS + + G +D +G TL+ YA C ++D A+ VF+E+P+RDV +W+++IAG
Sbjct: 119 TSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQ 178
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
S+AL +F+RM+ E N ++++ ++AC+ L +RAGE +H+ L+++V +
Sbjct: 179 GSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQV 238
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
A+++MY+KCG +K F+VF+ M K++ +W MI A +G G A+ LF +M +T
Sbjct: 239 CNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQ 298
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++ DS+++ A+L AC+H GLV+EG FDEM + ++HYG +VD+LGRAG + EA
Sbjct: 299 VEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVG-RGVNRNVKHYGSVVDLLGRAGRLGEA 357
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN----YVLAAS 414
Y II +MP P+ V+ +S LGAC+ +G V + KL+ E+G+N +VL ++
Sbjct: 358 YRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLV-----EMGSNSCGDFVLLSN 412
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
V + W+ + A+ + + KVPG S+++V
Sbjct: 413 VYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVE 447
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 237/398 (59%), Gaps = 3/398 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R++ + +P + ++ T+I Y++T +E++ LF +ML+ G P+ +T V+
Sbjct: 60 ALDDARNVLDRMP-ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL 118
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+C I G VHSL+ K +S ++G++LL MYA + I A+ VF+ +P RDVV
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 178
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
S +++I+G+ +AL +F ++ N VT +LV+A + L ++ G+ +H+
Sbjct: 179 SCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI 238
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ L VAL +L++MYSKCG + + +VF+ M E+++ SW M+ G +G G+ I
Sbjct: 239 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 298
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
SLF K + +KPDS++ A+LS CSH GLVDEG + FD + + + HYGC++D+
Sbjct: 299 SLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGR+G +E+A ++I NMP E I S LGACR H V ++ + + + LL++EPE N
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANV-HVGELVAQKLLEMEPENAGN 416
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
YV+ +++ + +G W ++ + +K + K PG SW+
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 160/316 (50%), Gaps = 32/316 (10%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y + AC + G VH+ + ++G L+ MY C +D A+ V + MP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
R VVSW++MI+G+ + +AL +F +M A PN TL +++++C+ ++ G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+HS V E + +G++L++MY+K ++++A +VF+ + E+++ S T +ISG A G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN-----------YFDEMA-- 330
A+ LF ++ G++ + ++F+ +++A S L +D GK +F +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 331 ---------------RVYN--IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE--PNA 371
RV++ ++ ++ + M+ GR GL E + +++ E P++
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDS 312
Query: 372 VILRSFLGACRNHGQV 387
V L + L C + G V
Sbjct: 313 VTLLAVLSGCSHGGLV 328
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 249/433 (57%), Gaps = 4/433 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L +LH LK +N + + F+ + SL + + +F+ + + + ++N LI +A
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHA 472
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+++ S+ +M +GL PD+FT ++ AC + + +G VH I + L+ D +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ ++L +Y C E+ +A+F+ M + +VSW+++I G++ P AL VF +M L
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
++++ + AC+ L ++R G H+YA+ + LE D + +L++MY+K G + ++
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
KVFN ++EK+ SW MI G +G AI LF +M +TG PD ++F +L+AC+H G
Sbjct: 653 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 712
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII-RNMPTEPNAVILRS 376
L+ EG Y D+M + +KP ++HY C++DMLGRAG +++A ++ M E + I +S
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 772
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L +CR H Q L + + + L +LEPE NYVL +++ + G W+ ++ +N+
Sbjct: 773 LLSSCRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 437 LNKVPGCSWVKVN 449
L K GCSW+++N
Sbjct: 832 LRKDAGCSWIELN 844
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 14/314 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
I++ + +H L + T L ++ + +R I + ++ S +R +F+ L + LF
Sbjct: 100 IEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR-SKNLFQ 153
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I +Y++ E ++ F EM+ T L PD+FTYP V+KAC +GIG +VH L+
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL D ++GN L+ Y + A +F+ MP R++VSW+SMI F ++
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 188 KVFHRMKLANES----PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ M N P+ TLV+++ C + G+ +H +AV L+ ++ L AL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG--LKP 301
++MYSKCG + A +F + KN+ SW M+ G + G + + +M+ G +K
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 302 DSISFSAILSACSH 315
D ++ + C H
Sbjct: 394 DEVTILNAVPVCFH 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 7/275 (2%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT----GLRPDNFTYPFVVKA 110
LF+ +P L ++N++IR ++ S ES L EM++ PD T V+
Sbjct: 243 QLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
C R IG+G VH K+ LD + + N L+ MY+ C I A+ +F+ ++VVSW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYA 228
++M+ GF A V +M E + VT+++ V C + + + +H Y+
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + + A V Y+KCG + A +VF+ +R K + SW +I G A + ++
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 481
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+M +GL PDS + ++LSACS L + GK
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 208 LVSACTSLINVRAGESIHSYAVVNG---LELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L+ A ++ G IH +V+G L D L T ++ MY+ CG + + VF+ +R
Sbjct: 90 LLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGK 323
KNL W +IS + N + + F +MI T L PD ++ ++ AC+ + V G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
+ + ++ +V G G + +A + MP E N V S + +
Sbjct: 208 AVHGLVVKTGLVEDVFVG-NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSD 265
Query: 384 HG 385
+G
Sbjct: 266 NG 267
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 230/388 (59%), Gaps = 5/388 (1%)
Query: 68 AYNTLIRAYAKTSCSI-ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++NT++ A + I E +K+F+ M++ GL P+ T+ ++ A ++ +G VH+
Sbjct: 549 SWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAA 608
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP-VRDVVSWSSMIAGFVACDSPSD 185
+ K G+ D + N L+ YA ++ + +F M RD +SW+SMI+G++ + +
Sbjct: 609 VMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQE 668
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+ M + + + T +++AC S+ + G +H++ + + LE DV + +ALV+
Sbjct: 669 AMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVD 728
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MYSKCG V+ A K+FN M ++N SW MISG A +G G AI +F +M+++ PD ++
Sbjct: 729 MYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVT 788
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F ++LSACSH GLV+ G YF EM + I P +EHY C++D+LGRAG I++ I+ M
Sbjct: 789 FVSVLSACSHAGLVERGLEYF-EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRM 847
Query: 366 PTEPNAVILRSFLGACRN--HGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
P EPNA+I R+ L ACR G + L ++LL++EP+ NYVLA++ + +G W+
Sbjct: 848 PIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWE 907
Query: 424 TAAELMVAINQKGLNKVPGCSWVKVNDG 451
A+ A+ Q K G SWV +NDG
Sbjct: 908 DTAKARTAMRQATEKKEAGRSWVTLNDG 935
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%)
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++NT+I A + E++ + M ++ + P NF + +C L+ G VH
Sbjct: 447 ISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCD 506
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP-SD 185
K GLD D + N L++MY C + VF M D VSW++M+ + +P S+
Sbjct: 507 AVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISE 566
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+KVF+ M PN VT ++L++A + L + G+ +H+ + +G+ D + AL+
Sbjct: 567 IVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALIS 626
Query: 246 MYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
Y+K G + +F N+ ++ SW MISG NG A+ MI +G D
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYH 360
+FS IL+AC+ + ++ G + I+ +E +VDM + G ++ A
Sbjct: 687 TFSIILNACASVAALERGMEL-----HAFGIRSHLESDVVVESALVDMYSKCGRVDYASK 741
Query: 361 IIRNMPTEPNAVILRSFLGACRNHG 385
+ +M T+ N S + HG
Sbjct: 742 LFNSM-TQRNEFSWNSMISGYARHG 765
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 157/315 (49%), Gaps = 8/315 (2%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL----IGIGGSVHS 125
N LI + S E++K+F T + + TY ++ A + + IG VH
Sbjct: 345 NGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHG 403
Query: 126 LIFKVGLDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + GL K + N L+ MYA C I+ A +F+ M D +SW+++I+ +
Sbjct: 404 HMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCE 463
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+A+ + M+ + SP++ L+S +S+C L + AG+ +H AV GL+LD ++ LV
Sbjct: 464 EAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLV 523
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG-NYAISLFAKMIQTGLKPDS 303
+MY +CG + +KVFN M E + SW M+ +A + + + +F M++ GL P+
Sbjct: 524 KMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNK 583
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++F +L+A S L +++ GK + + + + ++ ++G + H+
Sbjct: 584 VTFINLLAALSPLSVLELGKQVHAAVMK-HGVMEDNVVDNALISCYAKSGDMGSCEHLFT 642
Query: 364 NMPTEPNAVILRSFL 378
NM +A+ S +
Sbjct: 643 NMSDRRDAISWNSMI 657
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 167/361 (46%), Gaps = 19/361 (5%)
Query: 22 LHTLFLKTSLDHNTCIISRFILT-SLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
LH +K L+H+ + + + + + L +F+ +P + ++ L+ Y
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAV-SWTCLVSGYVLHG 141
Query: 81 CSIESIKLFDEMLK---TGLRPDNFTYPFVVKAC--GRCLLIGIGGSVHSLIFKVGLDSD 135
+ E+ ++F ML+ G RP +FT+ +++AC G +G VH L+ K S+
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201
Query: 136 KYIGNTLLRMYAACK--EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
+ N L+ MY +C +A+ VF+ P+RD+++W+++++ + + +F M
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261
Query: 194 KLANES----PNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNGLELDVALGTALVEMYS 248
+ + P T SL++A + A + + + + +G D+ +G+ALV ++
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
+ G ++A +F +++KN + +I GL A+ +F T + ++ ++
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVV 380
Query: 309 ILSACSHLGLVDE----GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+LSA + + +E G+ M R + +V+M + G IE A I +
Sbjct: 381 LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQL 440
Query: 365 M 365
M
Sbjct: 441 M 441
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF N+ ++N++I Y E++ M+ +G D T+ ++ AC
Sbjct: 640 LFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVA 699
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H+ + L+SD + + L+ MY+ C +D A +F M R+ SW+SMI+
Sbjct: 700 ALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMIS 759
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ A+++F M + ESP+ VT VS++SAC+ V G +G+
Sbjct: 760 GYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILP 819
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMR-EKNLQSW-TIMIS 276
+ + ++++ + G ++K + M E N W T++++
Sbjct: 820 QIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA 862
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
++H + K GL+ D ++ N L+ YA + A VF+EMP R+ VSW+ +++G+V
Sbjct: 82 NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141
Query: 182 SPSDALKVFH---RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL--D 236
+A +VF R A P S T +L+ AC R G ++ + +V+ E +
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201
Query: 237 VALGTALVEMYSKC--GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ AL+ MY C G A +VF+ ++L +W ++S A G +LF M
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261
Query: 295 IQTG-----LKPDSISFSAILS 311
Q G L+P +F ++++
Sbjct: 262 -QRGDSRIQLRPTEHTFGSLIT 282
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
E++H + GL D+ L LV Y+K + A +VF+ M E+N SWT ++SG +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 282 GRGNYAISLFAKM---IQTGLKPDSISFSAILSACSHLG 317
G A +F M +Q G +P S +F +L AC G
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 237/398 (59%), Gaps = 3/398 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
+L R++ + +P + ++ T+I Y++T +E++ LF +ML+ G P+ +T V+
Sbjct: 92 ALDDARNVLDRMP-ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL 150
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
+C I G VHSL+ K +S ++G++LL MYA + I A+ VF+ +P RDVV
Sbjct: 151 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 210
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
S +++I+G+ +AL +F ++ N VT +LV+A + L ++ G+ +H+
Sbjct: 211 SCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI 270
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ L VAL +L++MYSKCG + + +VF+ M E+++ SW M+ G +G G+ I
Sbjct: 271 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 330
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
SLF K + +KPDS++ A+LS CSH GLVDEG + FD + + + HYGC++D+
Sbjct: 331 SLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 389
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGR+G +E+A ++I NMP E I S LGACR H V ++ + + + LL++EPE N
Sbjct: 390 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANV-HVGELVAQKLLEMEPENAGN 448
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
YV+ +++ + +G W ++ + +K + K PG SW+
Sbjct: 449 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 486
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 168/346 (48%), Gaps = 32/346 (9%)
Query: 74 RAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLD 133
R A C + ++ M G Y + AC + G VH+ +
Sbjct: 15 RGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYR 74
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
++G L+ MY C +D A+ V + MP R VVSW++MI+G+ + +AL +F +M
Sbjct: 75 PAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKM 134
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
A PN TL +++++C+ ++ G+ +HS V E + +G++L++MY+K ++
Sbjct: 135 LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENI 194
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
++A +VF+ + E+++ S T +ISG A G A+ LF ++ G++ + ++F+ +++A
Sbjct: 195 QEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL 254
Query: 314 SHLGLVDEGKN-----------YFDEMA-----------------RVYN--IKPTMEHYG 343
S L +D GK +F + RV++ ++ ++ +
Sbjct: 255 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 314
Query: 344 CMVDMLGRAGLIEEAYHIIRNMPTE--PNAVILRSFLGACRNHGQV 387
M+ GR GL E + +++ E P++V L + L C + G V
Sbjct: 315 AMLMGYGRHGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLV 360
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 231/403 (57%), Gaps = 13/403 (3%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ +P + + ++ LI YA+ E+I L +ML+ RP+ FT+ ++KA G
Sbjct: 114 ARHVFDKMP-SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATG 172
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
C IG +H+L K D D Y+G+ LL MYA C+++D+A VF+ + ++ VSW++
Sbjct: 173 ACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNA 232
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
+IAGF L F M+ T S+ SA + + G +H++ + +G
Sbjct: 233 LIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSG 292
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+L +G ++ MY+K G + A KVF+ M +++L +W M++ LA G G A++ F
Sbjct: 293 QKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFE 352
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
++ + G++ + I+F ++L+ACSH GLV EGK+YFD M + YN++P ++HY VD+LGRA
Sbjct: 353 EIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRA 411
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNH-----GQVLYLDDNLGKLLLKLEPELGA 407
GL++EA + MP EP A + + LGACR H GQ Y D+ + +L+P+
Sbjct: 412 GLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ--YAADH----VFELDPDDTG 465
Query: 408 NYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL ++ + +G W+ AA + + G+ K P CSWV++ +
Sbjct: 466 PPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIEN 508
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 135/256 (52%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+ + ++ + S ++ D + L P Y ++ AC + + ++H+ +
Sbjct: 27 AHRAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHL 86
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L D ++ N+L+ MY C + A+ VF++MP RDVVSW+ +IAG+ P++A+
Sbjct: 87 SRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAI 146
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+ M A PN T SL+ A + GE +H+ AV + DV +G+AL++MY
Sbjct: 147 GLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMY 206
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
++C ++ A VF+ + KN SW +I+G A G + FA+M + G ++S
Sbjct: 207 ARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYS 266
Query: 308 AILSACSHLGLVDEGK 323
++ SA + +G +++G+
Sbjct: 267 SMFSAFARIGALEQGR 282
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 244/403 (60%), Gaps = 12/403 (2%)
Query: 49 SLHFTRSLFNNLPVTPP-LFAYNTLIRAYAKTSCSIE-SIKLFDEMLKTGLRPDNFTYPF 106
++ R LF+++P+ L ++N+++ +A+T I +++LF++M + L N
Sbjct: 206 TIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGG 265
Query: 107 VVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
K CGR HSL F D + ++ YA +I VA+ +F+EMP +D
Sbjct: 266 FAK-CGRIEF------AHSL-FNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKD 317
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIH 225
VV++++++AG+ ++AL++FH M + +N SP+ TLV +SA + L +V S+H
Sbjct: 318 VVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMH 377
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+Y + NG+ + + AL++MYSKCG +E A +F+ + +K + W MISG+A NG G
Sbjct: 378 NYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGK 437
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM 345
A + +M + +KPD I+F +L+AC+H GLV EG F+ M +V+ ++P ++HYGCM
Sbjct: 438 LAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCM 497
Query: 346 VDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPEL 405
VD+LG+AGL+E A I MP EPN +I R+ L AC+NH + + + + K L+ ++
Sbjct: 498 VDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNH-ENFTIGELIAKHLMTMDSCN 556
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
++YVL +++ + G W A+++ + + ++ L KVPGCSW+++
Sbjct: 557 SSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIEL 599
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 183/365 (50%), Gaps = 26/365 (7%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS----LHFTRSLF------- 57
L++ +T + ++Q+H +KT N+ + ++ IL S+S + F R +F
Sbjct: 20 LLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQ 79
Query: 58 ----NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
N+L P F +N +I++Y+ + + ++ LF ML+ G D F++ ++KAC R
Sbjct: 80 RIRRNHLDDDP--FLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACAR 137
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L+ G +H L+ K+ + S+ ++ N L+ MY C +I+ A+ VF+ MP++D VS++SM
Sbjct: 138 VCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSM 197
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G+V + A ++F M L +++ L+S S + G +
Sbjct: 198 IDGYVKSGTIDLARELFDSMPLEDKN-----LISWNSMLGGFAQTKDGIGLALELFEKMP 252
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
E D+ ++ ++KCG +E A +FN M ++++ SW+ MI G A G A +LF +
Sbjct: 253 ERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDE 312
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M D ++F+ I++ + G E F EM R N+ P + + + G
Sbjct: 313 MPDK----DVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLG 368
Query: 354 LIEEA 358
+E+A
Sbjct: 369 HVEKA 373
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 31/141 (21%)
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK------- 323
W +I + A+ LF M++ G D SFS IL AC+ + LV+EGK
Sbjct: 93 WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLM 152
Query: 324 ------NYF--------------DEMAR-VYNIKPTMEH--YGCMVDMLGRAGLIEEAYH 360
N F E AR V++ P + Y M+D ++G I+ A
Sbjct: 153 KLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARE 212
Query: 361 IIRNMPTE-PNAVILRSFLGA 380
+ +MP E N + S LG
Sbjct: 213 LFDSMPLEDKNLISWNSMLGG 233
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 241/448 (53%), Gaps = 26/448 (5%)
Query: 21 QLHTLFLKTSLDHNTCI---ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +K +D +T I +S F S L F F + + ++ ++I +
Sbjct: 186 QVHAYLIKYHIDFDTSIGNSLSSFY--SKFRRLEFAIKAFKIIK-EKDVISWTSVISSCC 242
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S+ F +ML G++P+ +T V+ AC L + +G +HSL K+G S
Sbjct: 243 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 302
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG-----------FVACDSPSDA 186
I N+++ +Y C + A+ +FE M ++V+W++MIAG A S S A
Sbjct: 303 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F ++ + P+ T S++S C++L+ + GE IH + +G+ DV +GTALV M
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 422
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++KA K F M + + SWT MI+G A +G A+ LF M G+KP+ ++F
Sbjct: 423 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 482
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GL DE YF+ M + YNIKP M+H+ C++DM R G +EEA+ ++ M
Sbjct: 483 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 542
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLAASVSSLSGNW 422
EPN I + CR+HG+ +LG + LLKL+P+ YV ++ +G W
Sbjct: 543 FEPNETIWSMLIAGCRSHGK-----SDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRW 597
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + ++ + K+ SW+ + +
Sbjct: 598 KDVSKVRKLMKEEKVGKLKDWSWISIKE 625
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 45/374 (12%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+NLP + A+ TL+ Y + S + +++LF +ML+ G P N+T V+ AC
Sbjct: 121 VFDNLP-RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 179
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
I G VH+ + K +D D IGN+L Y+ + ++ A F+ + +DV+SW+S+I+
Sbjct: 180 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 239
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ +L F M PN TL S++SAC ++ + G IHS ++ G
Sbjct: 240 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 299
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG-----------LADNGRG 284
+ + +++ +Y KCG + +A K+F M NL +W MI+G +A + G
Sbjct: 300 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 359
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY------------------- 325
+ A+++F K+ ++G+KPD +FS++LS CS+L +++G+
Sbjct: 360 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 419
Query: 326 ---------FDEMARVYNIKP--TMEHYGCMVDMLGRAGLIEEAYHIIRNMP---TEPNA 371
D+ ++ + P TM + M+ R GL ++A + +M +PN
Sbjct: 420 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 479
Query: 372 VILRSFLGACRNHG 385
V L AC + G
Sbjct: 480 VTFVGVLSACSHAG 493
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 133/232 (57%)
Query: 91 EMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK 150
E K G R ++ Y +++ C L +H I K G D ++ L+ +Y+ C
Sbjct: 54 EEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCG 113
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A VF+ +P R+V +W++++ G+V P AL++F +M A P++ TL +++
Sbjct: 114 VMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLN 173
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
AC+SL ++ G+ +H+Y + ++ D ++G +L YSK +E A K F +++EK++ S
Sbjct: 174 ACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVIS 233
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
WT +IS DNG+ ++S F M+ G+KP+ + +++LSAC + +D G
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLG 285
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IH + V G D+ + T LV +YSKCG +E A KVF+ + +N+ +WT +++G N
Sbjct: 86 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 145
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF KM++ G P + + +L+ACS L ++ GK + + Y+I
Sbjct: 146 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIK-YHIDFDTSIGN 204
Query: 344 CMVDMLGRAGLIE---EAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ + +E +A+ II+ E + + S + +C ++GQ
Sbjct: 205 SLSSFYSKFRRLEFAIKAFKIIK----EKDVISWTSVISSCCDNGQ 246
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 225/403 (55%), Gaps = 17/403 (4%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+FN++P+ + ++ TLI + + F +ML + P++F++ +AC
Sbjct: 166 SVFNDIPLKTAV-SWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASI 224
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G +H+ + K GL D + N++L MY C + AK F E+ +++++W+++I
Sbjct: 225 SSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI 284
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
AG+ DS S++L +F +M PN T S+ +AC +L + G+ +H V G +
Sbjct: 285 AGYERSDS-SESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+VAL +L++MY+KCG + + K+F M ++L SWT M+ G +G G A+ LF +M
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+Q+G++PD I F +L CSH GLVD+G YF M YNI P E Y C+VD+LGRAG
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYV 410
+EEA+ ++ NMP EP+ + + LGAC+ Y NLG L +L P + Y+
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACK-----AYKLSNLGNLAAQRVLDRRPNMAGTYL 518
Query: 411 LAASVSSLSGNWDTAA---ELMVAINQKGLNKVPGCSWVKVND 450
L + + + G W A +LM +N+K K G SW+++ +
Sbjct: 519 LLSKIYAAEGKWGEFAKMRKLMKGMNKK---KEVGKSWIEIRN 558
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 165/313 (52%), Gaps = 4/313 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LFN +P + + +I + + ++ +F EML++ ++P+ FT V+KAC
Sbjct: 64 NLFNEIP-ERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGM 122
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-CKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G HSL K G+D Y+ N LL MYAA C +D A +VF ++P++ VSW+++
Sbjct: 123 KALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTL 182
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAGF L F +M L + PNS + AC S+ + G+ IH+ GL
Sbjct: 183 IAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGL 242
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D + ++++MY +C ++ A + F + EKNL +W +I+G + + ++SLF +
Sbjct: 243 HCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQ 301
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G KP+ +F++I +AC++L ++ G+ + R + ++DM + G
Sbjct: 302 MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVR-RGFDKNVALINSLIDMYAKCG 360
Query: 354 LIEEAYHIIRNMP 366
I +++ + +MP
Sbjct: 361 SISDSHKLFCDMP 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F E+P RDVV+W++MI GF +C+ A +F M + PN+ T+ S++ AC +
Sbjct: 65 LFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKA 124
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMY-SKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G HS A +G++ V + AL++MY + C ++ A VFN + K SWT +I+
Sbjct: 125 LSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIA 184
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G G G + F +M+ + P+S SFS AC+ + GK + + Y +
Sbjct: 185 GFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTK-YGLH 243
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++DM R + +A + TE N + + +
Sbjct: 244 CDAPVMNSILDMYCRCNYLCDAKRCFGEL-TEKNLITWNTLIAG 286
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
T L++ Y G +A +FN + E+++ +WT MI G + A ++F++M+++ ++
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA-GLIEEAY 359
P++ + S++L AC + + G +A + I ++ ++DM + +++A
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGA-LAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK--LEPELGAN---YVLAAS 414
+ ++P + AV + + + G D G L + L ++G N + +AA
Sbjct: 166 SVFNDIPLK-TAVSWTTLIAGFTHRG-----DGYSGLLAFRQMLLEDVGPNSFSFSIAAR 219
Query: 415 VSSLSGNWDTAAELMVAINQKGLN 438
+ ++ ++ A+ + GL+
Sbjct: 220 ACASISSYSCGKQIHAAVTKYGLH 243
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 231/396 (58%), Gaps = 4/396 (1%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
FN +P + ++N++I +T E++ LF M K G R D T ++++C +
Sbjct: 309 FNEMPCRNTV-SWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 367
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+HS++ + G + ++++ N+L+ Y+ C I++A +F+ + +D VSWS+MIAG
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 427
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
F C P +A+ +F M A E PN VT++SL+ A + +++ + H A+ GL +
Sbjct: 428 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAE 487
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
VA+GTA+++MY+KCG + + K F+ + EKN+ SW MI+ NG A++L ++M
Sbjct: 488 VAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKL 547
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
GLKP+ ++ ++LSACSH GLV+EG ++F+ M + + ++P +EHY CMVDML RAG +
Sbjct: 548 HGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLN 607
Query: 357 EAYHIIRNMPT--EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAAS 414
A ++I MP A + + L ACR+ G L +L+LEP+ A Y LA+S
Sbjct: 608 SAMNLIEKMPERMRDGAGLWGALLSACRSSGNS-RLGAGAAFRVLELEPQSSAGYFLASS 666
Query: 415 VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + SG W AA + + +G+ V G S V V D
Sbjct: 667 MYAASGLWADAARMRWLVKARGVRVVAGYSLVHVED 702
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 180/356 (50%), Gaps = 34/356 (9%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ +++ +I Y +T + +++LF EM + D T V+KAC I +G SVH
Sbjct: 215 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 274
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
++ GLD D ++GN+++ MY+ C + + A F EMP R+ VSW+S+I+G V + S
Sbjct: 275 GVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHS 334
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
+AL +F+ M A + VTLV+L+ +C ++ + IHS + G EL+ + +L+
Sbjct: 335 EALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLI 394
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+ YSKC +E A+K+F+ ++ K+ SW+ MI+G G+ + AI+LF +M Q KP+ +
Sbjct: 395 DAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGV 454
Query: 305 SFSAILSACS----------------HLGLVDE---GKNYFDEMARVYNI---------- 335
+ ++L A S GL E G D A+ I
Sbjct: 455 TILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 514
Query: 336 -KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQV 387
+ + +G M+ G GL +A ++ M +PN V S L AC + G V
Sbjct: 515 PEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLV 570
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 13/348 (3%)
Query: 57 FNNLPVTPPLFAYNTLIRAYA--KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGR 113
F P+ P L +N I+ K S E+ + +M K G + D ++KAC
Sbjct: 3 FPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSS 62
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L + G S+H+ + K G DS GN++L Y +D A VF+ M RD VSW+ M
Sbjct: 63 -LPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIM 121
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I G ++ + L F + ++ PN TLV + AC SL + G +H Y + +G
Sbjct: 122 IHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGF 181
Query: 234 ELDV-ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
LD+ ++ +L+ MY+ +E+A ++F+ M E+++ SW++MI G G A+ LF
Sbjct: 182 -LDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFL 239
Query: 293 KMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
+M ++ D I+ ++L AC++ G + G++ + + + ++DM +
Sbjct: 240 EMTSNASIELDGITMVSVLKACANTGDISMGRSVHG-VVICRGLDYDLFVGNSIIDMYSK 298
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGA---CRNHGQVLYLDDNLGK 396
E A+ MP N V S + H + L L ++GK
Sbjct: 299 CDDHESAFKAFNEMPCR-NTVSWNSIISGLVRTEKHSEALSLFYSMGK 345
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 221/374 (59%), Gaps = 1/374 (0%)
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
Y++ E++ L+ EM+ + NF + +KAC + G +VH+ + K D
Sbjct: 151 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDP 210
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D+ + N LLR+Y+ + A +F+ MP R++VSW+S+IAG V + +A++ F M+
Sbjct: 211 DQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQ 270
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ VTL +++ C + + +G+ IH+ V + + D + +LV+MY+KCG ++
Sbjct: 271 GKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMD 330
Query: 255 KAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+VFN M+ K+L SW +I+G A NGR A+ F +MI +G PD I+F A+LS CS
Sbjct: 331 YCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 390
Query: 315 HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVIL 374
H GL D+G F+ M + I PT+EHY C+VD+LGRAG I+EA I++NMP +P I
Sbjct: 391 HAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIW 450
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
S L +CR HG V L + + K L +LEP NYV+ +++ + +G W++ + + +
Sbjct: 451 GSLLNSCRLHGNV-PLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEK 509
Query: 435 KGLNKVPGCSWVKV 448
+G+ K GCSW+++
Sbjct: 510 RGMTKEAGCSWLQI 523
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYAKT 79
+H LK + D + +++ +L S F +L F+ +P L ++N+LI K
Sbjct: 199 VHAQVLKATEDPDQ-VVNNALLRLYSEDGCFEEALRMFDGMP-HRNLVSWNSLIAGLVKK 256
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+I+ F M G+ T ++ C R +G G +H++I K D +
Sbjct: 257 EGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVL 316
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N+L+ MYA C +D + VF M +D+ SW+++I G+ ++A++ F M + S
Sbjct: 317 NSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFS 376
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVN-GLELDVALGTALVEMYSKCGHVEKAFK 258
P+ +T ++L+S C+ G + ++ G+ V LV++ + G +++A +
Sbjct: 377 PDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALE 436
Query: 259 VFNLMREKNLQS-WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ M K S W +++ +G A ++ ++ + L+P++ +LS
Sbjct: 437 IVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE--LEPNNAGNYVMLS 488
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREK-NLQS--WTIMISGLADNGRGNYAISLFAKMI 295
L L+ ++S CG V++A +VF E +L W M G + NG A+ L+ +M+
Sbjct: 110 LKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMV 169
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + +FS L ACS LG + G+ ++ + P ++ + G
Sbjct: 170 CQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATE-DPDQVVNNALLRLYSEDGCF 228
Query: 356 EEAYHIIRNMP 366
EEA + MP
Sbjct: 229 EEALRMFDGMP 239
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 223/388 (57%), Gaps = 2/388 (0%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P + ++N +I A+A + E+I F +M+ GL PD+ TY ++ CG + + G +
Sbjct: 426 PDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQI 485
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDS 182
HS I K+G D + + N+LL MY C + A VF ++ ++VSW+++++ +
Sbjct: 486 HSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQ 545
Query: 183 PSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
+ +++ M + P+S+T+ +L+ C L ++ G +H Y++ +GL LDV++
Sbjct: 546 EGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNG 605
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
L++MY+KCG ++ A VF+ + ++ SW+ +I G A G G+ A++LF M G++P+
Sbjct: 606 LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPN 665
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+++ LSACSH+GLV+EG + M + I PT EH+ C+VD+L RAG + EA I
Sbjct: 666 EVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFI 725
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+ + + ++ L AC+ H V + G +LKL+P A V+ ++ + +GNW
Sbjct: 726 QKSGLDADITAWKTLLAACKTHNNVDIAERGAGN-ILKLDPSNSAAMVMLCNIHASAGNW 784
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+ A+L + Q G+ KVPG SW++V D
Sbjct: 785 EEVAKLRKLMKQMGVQKVPGQSWIEVKD 812
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 190/410 (46%), Gaps = 51/410 (12%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS---LHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
QLH +K+ H+ + S+ L S+ + + ++F +P T L ++ T+I Y
Sbjct: 281 QLHAHVIKSWFGHH--LTSQNALISMYTNFGQIEHASNVFTRIP-TKDLISWGTMITGYI 337
Query: 78 KTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ +E++ LF ++L+ G +P+ F + V AC L + G VH + K GL +
Sbjct: 338 QLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNV 397
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ G +L MYA + AK F ++ D+VSW+++IA F ++A+ F +M
Sbjct: 398 FAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 457
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
+P+S+T +SL+ C S + + G IHSY V G + ++ + +L+ MY+KC H+ A
Sbjct: 458 GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDA 517
Query: 257 FKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
VF ++ R NL SW ++S + L+ +M +G KPDSI+ + +L C+
Sbjct: 518 LNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAE 577
Query: 316 L--------------------------GLVD---------EGKNYFDEMARVYNIKPTME 340
L GL+D ++ FD + +
Sbjct: 578 LTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNL-----DIV 632
Query: 341 HYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ ++ + GL EA + I+ N+ +PN V L AC + G V
Sbjct: 633 SWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLV 682
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 159/342 (46%), Gaps = 14/342 (4%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSC 81
LH L K + + R + + + SL ++F+NL P N+ I K
Sbjct: 84 LHILLFKYIISMTIHSVFRRMYSYVKPSLQ--PAIFSNLSKELPT---NSYIIFLCKQHH 138
Query: 82 SIESIKLFDEMLKTG---LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+++ FD LK P TY +V AC + +H + K +
Sbjct: 139 YKEALEAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIIL 196
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N ++ MY C + A+ VF+ M + +VVSW+SMI+G+ +DA+ ++ +M + +
Sbjct: 197 QNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQ 256
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P+ +T S++ AC ++ G +H++ + + + AL+ MY+ G +E A
Sbjct: 257 FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASN 316
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLG 317
VF + K+L SW MI+G G A+ LF +++ G +P+ F ++ SACS L
Sbjct: 317 VFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLL 376
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGC-MVDMLGRAGLIEEA 358
++ GK M + ++ + GC + DM + G + A
Sbjct: 377 ELEYGKQ-VHGMCVKFGLRRNV-FAGCSLCDMYAKFGFLPSA 416
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 2/238 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+ +K D + + + S LH ++F ++ L ++N ++ A +
Sbjct: 484 QIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQK 543
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+ +L+ EM +G +PD+ T ++ C +G+G VH K GL D +
Sbjct: 544 KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVC 603
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N L+ MYA C + A+ VF+ D+VSWSS+I G+ C +AL +F M
Sbjct: 604 NGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQ 663
Query: 200 PNSVTLVSLVSACTSLINVRAGESIH-SYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
PN VT + +SAC+ + V G ++ S +G+ + +V++ ++ G + +A
Sbjct: 664 PNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEA 721
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 250/448 (55%), Gaps = 14/448 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+ +K ++ N + S I L S + +R + ++ + + N LI +
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS-IVPINALITGLVQN 605
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
+ E+I+LF ++LK G +P NFT+ ++ C R + IG VH K L+ D +
Sbjct: 606 NREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSL 665
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
G +L+ +Y CK ++ A + EE+P +++V W++ I+G+ +L +F RM+ +
Sbjct: 666 GISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYD 725
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ T S++ AC+ + + G+ IH V +G +AL++MYSKCG V +F
Sbjct: 726 VRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSF 785
Query: 258 KVFN-LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
++F L +N+ W MI G A NG N A+ LF KM ++ +KPD ++ +L ACSH
Sbjct: 786 EIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHA 845
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ EG ++FD M++VY I P ++HY C++D+LGR G +++A +I +P + VI +
Sbjct: 846 GLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWAT 905
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+L AC+ H D+ GK+ L+++EP+ + YV +S+ + +GNW A A+
Sbjct: 906 YLAACQMHK-----DEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAM 960
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEMSKET 460
+KG+ K PGCSW+ V + + + ++T
Sbjct: 961 REKGVMKFPGCSWITVGNKQSVFVVQDT 988
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 186/358 (51%), Gaps = 12/358 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H +K LD N + S I L + + +F+ + +N ++ + +
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD-FSTEKNIVMWNAILYGFVQN 403
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
E+I++F M + L D+FT+ V+ AC + +G VH + K G+D+D ++
Sbjct: 404 ELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVA 463
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N +L MY+ IDVAKA+F +PV+D VSW+++I G + +A+ + RMK +
Sbjct: 464 NAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIA 523
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+ V+ + ++AC+++ + G+ IHS ++ + + A+G++L+++YSK G VE + KV
Sbjct: 524 LDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 583
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
+ ++ +I+GL N R + AI LF ++++ G KP + +F++ILS C+
Sbjct: 584 LAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTR---- 639
Query: 320 DEGKNYFDEMARVYNIKPTM--EHYGCMVDMLG---RAGLIEEAYHIIRNMPTEPNAV 372
+ + Y +K + + + ++G + L+E+A ++ +P N V
Sbjct: 640 -PVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLV 696
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 175/331 (52%), Gaps = 3/331 (0%)
Query: 32 DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDE 91
D TC+ L S+ L R+L + +T + A+N +I +Y+++ E L+ +
Sbjct: 257 DQVTCVTIISTLASMG-RLGDARTLLKRIRMTSTV-AWNAVIASYSQSGLDSEVFGLYKD 314
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
M K GL P T+ ++ A G +H+ K GLD++ ++G++L+ +Y
Sbjct: 315 MKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGC 374
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
I AK VF+ +++V W++++ GFV + + +++F M+ A+ + T VS++ A
Sbjct: 375 ISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGA 434
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C +L ++ G +H + NG++ D+ + A+++MYSK G ++ A +F+L+ K+ SW
Sbjct: 435 CINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSW 494
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I GLA N AI++ +M G+ D +SF+ ++ACS++ ++ GK +
Sbjct: 495 NALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIK 554
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
YN+ ++D+ + G +E + ++
Sbjct: 555 -YNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 17/317 (5%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F L+ YAK ++ ++FD + PD + ++ R ++ S
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIAC----PDTICWTSMIAGYHRVGRYQQALALFS 247
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K+G D+ T++ A+ + A+ + + + + V+W+++IA + S+
Sbjct: 248 RMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
++ MK P T S++SA ++ G IH+ AV +GL+ +V +G++L+
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+Y K G + A KVF+ EKN+ W ++ G N I +F M + L+ D +
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHI 361
F ++L AC +L +D G+ IK M+ M+DM + G I+ A +
Sbjct: 428 FVSVLGACINLYSLDLGRQ-----VHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKAL 482
Query: 362 IRNMPTEP----NAVIL 374
+P + NA+I+
Sbjct: 483 FSLIPVKDSVSWNALIV 499
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 49/307 (15%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
++ A+ + CSI G PD F V+ AC R + G VH + K G
Sbjct: 140 VLDAFQRIRCSI------------GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSG 187
Query: 132 LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFH 191
S + L+ MYA C E+D A+ +F+ + D + W+SMIAG+ AL +F
Sbjct: 188 FCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFS 247
Query: 192 RMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG 251
RM+ P+ VT V+++S S+ G
Sbjct: 248 RMEKMGSVPDQVTCVTIISTLASM-----------------------------------G 272
Query: 252 HVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILS 311
+ A + +R + +W +I+ + +G + L+ M + GL P +F++ILS
Sbjct: 273 RLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILS 332
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
A +++ DEG+ A + + + ++++ + G I +A + + TE N
Sbjct: 333 AAANMTAFDEGRQ-IHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNI 390
Query: 372 VILRSFL 378
V+ + L
Sbjct: 391 VMWNAIL 397
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR--EKNLQSWTIM 274
RA +H+ + GL L LG ALV++Y + G V A++ + + + +
Sbjct: 68 QARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSV 127
Query: 275 ISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVY 333
+S A +G + F ++ G PD + +LSACS LG ++ G+ ++ +
Sbjct: 128 LSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSG 187
Query: 334 NIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
G +VDM + G +++A + + P+ + S + G+
Sbjct: 188 FCSSVFCQAG-LVDMYAKCGEVDDARRMFDGIAC-PDTICWTSMIAGYHRVGR 238
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 256/471 (54%), Gaps = 41/471 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLHFTRSLFNNLPVTPPLFAYNTLI 73
V ++H +KT L+ + + + + L + FT+ +F +P + ++N +I
Sbjct: 124 VREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQ-VFEEMPERDAV-SWNIMI 181
Query: 74 RAYAKTSCSIESIKLFDEM-LKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
Y + E++ ++ M +++ +P+ T + AC + +G +H I L
Sbjct: 182 SGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-EL 240
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD----------- 181
D +GN LL MY C + VA+ +F+ M V++V W+SM+ G+V C
Sbjct: 241 DLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFER 300
Query: 182 SPS--------------------DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
SPS DA+ +F M++ P+ +V+L++ C L + G
Sbjct: 301 SPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG 360
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ IH+Y N +++D + TAL+EMY+KCG +EK+ ++FN +++ + SWT +I GLA N
Sbjct: 361 KWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMN 420
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G+ + A+ LF M GLKPD I+F A+LSAC H GLV+EG+ F M+ +Y+I+P +EH
Sbjct: 421 GKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEH 480
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR---SFLGACRNHGQVLYLDDNLGKLL 398
YGC +D+LGRAGL++EA +++ +P + N +I+ + L ACR +G + + + L L
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNI-DMGERLATAL 539
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
K++ + + L AS+ + + W+ ++ + G+ KVPG S ++V+
Sbjct: 540 AKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVD 590
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 212/401 (52%), Gaps = 47/401 (11%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISL---HFTRSLFNNLPVTP 64
+L++ K++ L Q+ L + I+++ + S+ SL ++ +FN++ P
Sbjct: 13 SLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIH-HP 71
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
LF YN +I+A+ K +I LF ++ + G+ PDN+TYP+V+K G + G +H
Sbjct: 72 SLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIH 131
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
+ + K GL+ D Y+ N+L+ MYA ++ VFEEMP RD VSW+ MI+G+V C
Sbjct: 132 AFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFE 191
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+A+ V+ RM++ +NE PN T+VS +SAC L N+ G+ IH Y + N L+L +G AL
Sbjct: 192 EAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IANELDLTPIMGNAL 250
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA-----DNGRGNY------------ 286
++MY KCG V A ++F+ M KN+ WT M++G D R +
Sbjct: 251 LDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWT 310
Query: 287 --------------AISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---NYFDEM 329
AI+LF +M G++PD +L+ C+ LG +++GK NY DE
Sbjct: 311 AMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDE- 369
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI---IRNMPT 367
IK +++M + G IE++ I +++M T
Sbjct: 370 ---NRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDT 407
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 225/403 (55%), Gaps = 17/403 (4%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
S+FN++P+ + ++ TLI + + F +ML + P++F++ +AC
Sbjct: 166 SVFNDIPLKTAV-SWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASI 224
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G +H+ + K GL D + N++L MY C + AK F E+ +++++W+++I
Sbjct: 225 SSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI 284
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
AG+ DS S++L +F +M PN T S+ +AC +L + G+ +H V G +
Sbjct: 285 AGYERSDS-SESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+VAL +L++MY+KCG + + K+F M ++L SWT M+ G +G G A+ LF +M
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+Q+G++PD I F +L CSH GLVD+G YF M YNI P E Y C+VD+LGRAG
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYV 410
+EEA+ ++ NMP EP+ + + LGAC+ Y NLG L +L P + Y+
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACK-----AYKLSNLGNLAAQRVLDRRPNMAGTYL 518
Query: 411 LAASVSSLSGNWDTAA---ELMVAINQKGLNKVPGCSWVKVND 450
L + + + G W A +LM +N+K K G SW+++ +
Sbjct: 519 LLSKIYAAEGKWGEFAKMRKLMKGMNKK---KEVGKSWIEIRN 558
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 165/313 (52%), Gaps = 4/313 (1%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LFN +P + + +I + + ++ +F EML++ ++P+ FT V+KAC
Sbjct: 64 NLFNEIP-ERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGM 122
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAA-CKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G HSL K G+D Y+ N LL MYAA C +D A +VF ++P++ VSW+++
Sbjct: 123 KALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTL 182
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAGF L F +M L + PNS + AC S+ + G+ IH+ GL
Sbjct: 183 IAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGL 242
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D + ++++MY +C ++ A + F + EKNL +W +I+G + + ++SLF +
Sbjct: 243 HCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQ 301
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M G KP+ +F++I +AC++L ++ G+ + R + ++DM + G
Sbjct: 302 MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVR-RGFDKNVALINSLIDMYAKCG 360
Query: 354 LIEEAYHIIRNMP 366
I +++ + +MP
Sbjct: 361 SISDSHKLFCDMP 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 158 VFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLIN 217
+F E+P RDVV+W++MI GF +C+ A +F M + PN+ T+ S++ AC +
Sbjct: 65 LFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKA 124
Query: 218 VRAGESIHSYAVVNGLELDVALGTALVEMY-SKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ G HS A +G++ V + AL++MY + C ++ A VFN + K SWT +I+
Sbjct: 125 LSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIA 184
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
G G G + F +M+ + P+S SFS AC+ + GK + + Y +
Sbjct: 185 GFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTK-YGLH 243
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++DM R + +A + TE N + + +
Sbjct: 244 CDAPVMNSILDMYCRCNYLCDAKRCFGEL-TEKNLITWNTLIAG 286
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 241 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLK 300
T L++ Y G +A +FN + E+++ +WT MI G + A ++F++M+++ ++
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA-GLIEEAY 359
P++ + S++L AC + + G +A + I ++ ++DM + +++A
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGA-LAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK--LEPELGAN---YVLAAS 414
+ ++P + AV + + + G D G L + L ++G N + +AA
Sbjct: 166 SVFNDIPLK-TAVSWTTLIAGFTHRG-----DGYSGLLAFRQMLLEDVGPNSFSFSIAAR 219
Query: 415 VSSLSGNWDTAAELMVAINQKGLN 438
+ ++ ++ A+ + GL+
Sbjct: 220 ACASISSYSCGKQIHAAVTKYGLH 243
>gi|357517875|ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 510
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 249/455 (54%), Gaps = 10/455 (2%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI---SLHFTRSLFNN 59
S H + KT+ + Q H + + I ++ I + ++ R +F++
Sbjct: 20 SFHYTDQLHHCKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDD 79
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L +F +N +I+ YA E++ +++ M +G P+ +TYPFV+KACG
Sbjct: 80 LS-ERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLK 138
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H + K GL+ D ++GN + YA CKEI+ ++ VF+EM RD+VSW+SM++G++A
Sbjct: 139 GRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIA 198
Query: 180 CDSPSDALKVFHRMKLANES---PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+A+ +F M L ++ P++ TLV+++ A ++ AG IH Y V G++LD
Sbjct: 199 NGYVDEAVMLFCDM-LRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLD 257
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
A+G L+ +YS CG++ A VF+ + ++N+ W+ +I +G A+S+F ++++
Sbjct: 258 PAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVE 317
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
GL D I F ++LSACSH G+ +EG + F M Y + HY CMVD+LGRAG +E
Sbjct: 318 LGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLE 376
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
+A +I++MP +P + + LGA R H + L + + L L+P YV+ A +
Sbjct: 377 KAMELIQSMPIQPGKNVYGALLGASRIHKNI-ELAELAAEKLFVLDPNNAGRYVILAQMY 435
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
G W AA L I +K + K G S V++ G
Sbjct: 436 EDEGRWKDAARLRKIIREKEIKKPIGYSSVELESG 470
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 223/384 (58%), Gaps = 10/384 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
LF TLI Y + C + K+FDEM + P+ + VV AC R G S
Sbjct: 308 LFVATTLIGMYGECGCVGFARKVFDEMPQ----PNLVAWNAVVTACFR----GNDVSGAR 359
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
IF L + N +L Y E++ AK +F EMP RD VSWS+MI GF S ++
Sbjct: 360 EIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNE 419
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ F + A PN V+L ++SAC+ G+++H + +G V++ AL++
Sbjct: 420 SFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALID 479
Query: 246 MYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MYS+CG+V A VF M+EK ++ SWT MI+GLA +G G AI +F +M ++G+ PD I
Sbjct: 480 MYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEI 539
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
SF ++L ACSH GL+ EG+ YF +M RVY+I+P +EHYGCMVD+ GR+G +++AY I
Sbjct: 540 SFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQ 599
Query: 365 MPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDT 424
MP P A++ R+ LGAC +HG + L + + + L +L+P + VL ++V + +G W
Sbjct: 600 MPIPPTAIVWRTLLGACSSHGNI-ELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKD 658
Query: 425 AAELMVAINQKGLNKVPGCSWVKV 448
A + ++ + + K+ S V+V
Sbjct: 659 VASIRKSMIVQRIKKITAWSLVEV 682
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 181/382 (47%), Gaps = 49/382 (12%)
Query: 11 QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLPVTPPLF 67
Q K + L Q+H F+K+ +D ++ I + IL S+S +L + R L P P F
Sbjct: 180 QYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFP-EPDAF 238
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+NTL+R Y+++ S+ +F EM++ G + PD+F++ FVVKA + G +H
Sbjct: 239 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQ 298
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
K GLDS ++ TL+ MY C + A+ VF+EMP ++V+W++++ + S A
Sbjct: 299 ALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGA 358
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
++F +M + N + +V L AG
Sbjct: 359 REIFDKMLVRNHTSWNVML--------------AG------------------------- 379
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y K G +E A ++F+ M ++ SW+ MI G + NG N + S F ++++ ++P+ +S
Sbjct: 380 YIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSL 439
Query: 307 SAILSACSHLGLVDEGKNY--FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+ +LSACS G + GK F E + I + ++DM R G + A +
Sbjct: 440 TGVLSACSQSGAFEFGKTLHGFVEKSGYSWI---VSVNNALIDMYSRCGNVPMARLVFEG 496
Query: 365 MPTEPNAVILRSFLGACRNHGQ 386
M + + V S + HG
Sbjct: 497 MQEKRSIVSWTSMIAGLAMHGH 518
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/316 (43%), Positives = 200/316 (63%), Gaps = 2/316 (0%)
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE-SPNSVT 204
YA ++ A+ +F MPV++VVSW++MI+G+V AL VFH M + E P+ T
Sbjct: 244 YATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTT 303
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L+S++SAC L ++ G+ I+SY N L L + LG AL++M++KCG VE A +VF+ M
Sbjct: 304 LISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMS 363
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
++ + +WT M+SGLA NG+ AI+LF KM G KPD + F A+LSAC+H GLV+EGK
Sbjct: 364 KRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKR 423
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNH 384
FD+M + + IKP +EHYGCMVD+LGRAG +EEA M +PNAVI + L C+ H
Sbjct: 424 VFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIH 483
Query: 385 GQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
G L K++ + EP + L +++S+ G W+ VA+ Q+ + KVPGCS
Sbjct: 484 GNGDLLKSVTEKIMDQ-EPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCS 542
Query: 445 WVKVNDGSAEEMSKET 460
++V + E ++K+T
Sbjct: 543 SIQVGNRVHEFLAKDT 558
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 172/390 (44%), Gaps = 68/390 (17%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
++Q K + L Q H L H+ ++ + I S A
Sbjct: 8 ILQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSS---------------------A 46
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N L A K E+++++ M + ++FT+ F++K + G +H I
Sbjct: 47 FNLLDYATHK-----EALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEIL 101
Query: 129 KVGLDSDKYIGNTLLRMYAACKE-IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K+G S ++ N+LL YA C E + A VFEEMP RDV+SW+SMI+ ++ A+
Sbjct: 102 KLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAI 161
Query: 188 -------------------------------KVFHRMKLANESPNSVTLVSLVSACTSLI 216
VF +M L NE V+ S++S +
Sbjct: 162 GLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNE----VSWNSMISGYVRIG 217
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+VRA +SI E V TA++ Y+ G ++ A +FN M KN+ SW MIS
Sbjct: 218 DVRAAQSI----FYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMIS 273
Query: 277 GLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
G N + A+ +F M+ G +PD + +ILSAC+HLG ++ GK + + + +
Sbjct: 274 GYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGK-WINSYIKKNKL 332
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
++ ++DM + G +E A + +M
Sbjct: 333 HLSIPLGNALIDMFAKCGDVENAKEVFHHM 362
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACG 112
++FN++PV + ++N +I Y +++ +F ML G RPD T ++ AC
Sbjct: 254 ENIFNHMPVKN-VVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACA 312
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
+ G ++S I K L +GN L+ M+A C +++ AK VF M R +++W++
Sbjct: 313 HLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTT 372
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN- 231
M++G +A+ +F +M L P+ V ++++SACT V G+ + V
Sbjct: 373 MVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEF 432
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNGRGNYAISL 290
G++ + +V++ + G +E+A + M K N W ++ +G G+ S+
Sbjct: 433 GIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSV 492
Query: 291 FAK-MIQTGLKPDSISFSAILSA 312
K M Q P ++ + LSA
Sbjct: 493 TEKIMDQEPSNPSYLTLVSNLSA 515
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 231/402 (57%), Gaps = 13/402 (3%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P + + ++ LI YA+ E+I L +ML+ RP+ FT+ ++KA G
Sbjct: 12 RHVFDKMP-SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGA 70
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
C IG +H+L K D D Y+G+ LL MYA C+++D+A VF+ + ++ VSW+++
Sbjct: 71 CGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNAL 130
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAGF L F M+ T S+ SA + + G +H++ + +G
Sbjct: 131 IAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQ 190
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L +G ++ MY+K G + A KVF+ M +++L +W M++ LA G G A++ F +
Sbjct: 191 KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEE 250
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ + G++ + I+F ++L+ACSH GLV EGK+YFD M + YN++P ++HY VD+LGRAG
Sbjct: 251 IRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRAG 309
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNH-----GQVLYLDDNLGKLLLKLEPELGAN 408
L++EA + MP EP A + + LGACR H GQ Y D+ + +L+P+
Sbjct: 310 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ--YAADH----VFELDPDDTGP 363
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL ++ + +G W+ AA + + G+ K P CSWV++ +
Sbjct: 364 PVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIEN 405
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%)
Query: 145 MYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVT 204
MY C + A+ VF++MP RDVVSW+ +IAG+ P++A+ + M A PN T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
SL+ A + GE +H+ AV + DV +G+AL++MY++C ++ A VF+ +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
KN SW +I+G A G + FA+M + G ++S++ SA + +G +++G+
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 239/427 (55%), Gaps = 33/427 (7%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P L A+ ++ +Y T E++ L ++M ++ + PD V+ CG
Sbjct: 48 RRVFDGMP-ERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGH 106
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------- 151
+ G ++HS I + D + + L+ MYA+C +
Sbjct: 107 TRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAM 166
Query: 152 ---------IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
I++A+++F M +DVVSWS+MI+ + + PS+ L +F++M+ SP+
Sbjct: 167 VCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDE 226
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+T++S++SAC ++ ++ IHS +G +++ AL++M+SKCG + A +FN
Sbjct: 227 ITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNA 286
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M KN+ +WT MI+ A +G G A++LF +M G++P+ ++F +L AC H GLV EG
Sbjct: 287 MPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEG 346
Query: 323 KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACR 382
++ F+ M + Y I+P EHYGCMVD++GRA L++EA +I +M PN I S L AC
Sbjct: 347 RSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACW 406
Query: 383 NHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
HG + L + K +L+L+P YVL +++ + SGNW+ A +L V + G++K G
Sbjct: 407 MHGDI-ELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHGVSKETG 465
Query: 443 CSWVKVN 449
SW+++N
Sbjct: 466 YSWLELN 472
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 150/293 (51%), Gaps = 33/293 (11%)
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H + +VG D D ++G L+ YAAC+ + A+ VF+ MP RD+V+W M+ + +
Sbjct: 16 HGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNY 75
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ L + ++MK + P+ V L +++S C ++R+G++IHSY V+ + +D L +AL
Sbjct: 76 RETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSAL 135
Query: 244 VEMYSKC-------------------------------GHVEKAFKVFNLMREKNLQSWT 272
+ MY+ C G +E A +FN M EK++ SW+
Sbjct: 136 INMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWS 195
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
MIS A+N + + ++LF KM G+ PD I+ +++SAC+++G +D+ + + +
Sbjct: 196 AMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKAR-WIHSIVGN 254
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+ + ++DM + G + A ++ MP + N + S + A HG
Sbjct: 255 HGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRK-NVITWTSMIAAFAMHG 306
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ RS+FN++ + +++ +I AYA+ + E + LF++M G+ PD T V+
Sbjct: 176 IEIARSIFNHM-AEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVIS 234
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC + +HS++ G I N L+ M++ C + +A +F MP ++V++
Sbjct: 235 ACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVIT 294
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI 224
W+SMIA F AL +F +MK PN VT + L+ AC V G S+
Sbjct: 295 WTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSL 349
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 232/414 (56%), Gaps = 23/414 (5%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
N+P+ + ++ +I YA+ CS E++ F +M+ G P++ T ++ AC +
Sbjct: 355 NIPLD--VITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALS 412
Query: 119 IGGSVHSLIFKVGLDS------------DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRD 166
G +H+ K L S D + N L+ MY+ C+ A+++F+ +P R+
Sbjct: 413 QGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRE 472
Query: 167 --VVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGE 222
VV+W+ MI G+ +DALK+F M K +PN+ T+ ++ AC L +R G+
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGK 532
Query: 223 SIHSYAVVNGLELDVAL---GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
IH+Y V E + ++ L++MYSKCG V+ A VF+ M ++N SWT M+SG
Sbjct: 533 QIHAY-VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
+GRG A+ +F KM + G PD ISF +L ACSH G+VD+G NYFD M R Y++ +
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASA 651
Query: 340 EHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
EHY C++D+L R G +++A+ I+ MP EP+AVI + L ACR H V + L K L+
Sbjct: 652 EHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNK-LV 710
Query: 400 KLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
++ E +Y L +++ + + W A + + + G+ K PGCSWV+ G+A
Sbjct: 711 NMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTA 764
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 155/278 (55%), Gaps = 10/278 (3%)
Query: 62 VTP-PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
VTP P +N L+R + K +I + ML+ G +PD+FT P+ +KACG G
Sbjct: 109 VTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCG 168
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP---VRDVVSWSSMIAGF 177
++H LI G +S+ ++ N L+ MY+ C ++ A VF+E+ + DV+SW+S++A
Sbjct: 169 RALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 178 VACDSPSDALKVFHRM------KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
V +P AL++F M K NE + +++V+++ AC SL + + IHSYA+ N
Sbjct: 229 VKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRN 288
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G D + AL++ Y+KCG + A KVFN+M K++ SW M++G +G A LF
Sbjct: 289 GTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELF 348
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
M + + D I++SA+++ + G E + F +M
Sbjct: 349 ENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S K +G ++ Y AC A +V E + V W+ ++ + A+ V RM
Sbjct: 81 SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRM 140
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
A P+ TL + AC L + G ++H NG E +V + ALV MYS+CG +
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSL 200
Query: 254 EKAFKVFNLMREKNLQ---SWTIMISGLADNGRGNYAISLFAKMIQ------TGLKPDSI 304
E A VF+ + K + SW +++ A+ LF++M T + D I
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDII 260
Query: 305 SFSAILSACSHL 316
S IL AC+ L
Sbjct: 261 SIVNILPACASL 272
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 218/386 (56%), Gaps = 16/386 (4%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC---GRCLLIGIGGSVHS 125
++++I ++A+ + +I+ F M+ L PD+ +P KAC GRC +G SVH
Sbjct: 123 WSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRC---DVGKSVHC 179
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L+ K G D D ++G++L+ MYA C +I A+ VF+EMP R+VVSWS MI G+ +
Sbjct: 180 LVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEE 239
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+++F L N TL S++ C S + G+ IH +L +G++L+
Sbjct: 240 AMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLIS 299
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
+YSKCG +E A++VF+ + KNL W M+ A + A LF KM G++P+ I+
Sbjct: 300 LYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFIT 359
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F +L ACSH GLV+EGK YF M + Y I+P +HY MVD+LGRAG ++EA +I+ M
Sbjct: 360 FLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGM 418
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN----YVLAASVSSLSGN 421
PTEP + +F+ CR HG + +L ELGA +V+ ++ + +G
Sbjct: 419 PTEPTESVWGAFITGCRIHG-----NTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGR 473
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVK 447
++ AA+ + +G+ K G SW++
Sbjct: 474 YEDAAKARKMLRDRGVKKETGLSWIE 499
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H+ I K GL + + L+ Y+ + ++ VFEE + +WSS+I+ F
Sbjct: 73 GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+ P A++ F RM N P+ S AC L G+S+H + G ++DV +
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
G++LV+MY+KCG +++A VF+ M +N+ SW+ MI G G A+ LF + + GL
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARV-YNIKPTMEHYGCMVDMLGRAGLIEEA 358
+ + S+++ C L++ GK + Y++ + ++ + + GLIE A
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVG--SSLISLYSKCGLIEGA 310
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQV 387
Y + +P + N + + L AC H
Sbjct: 311 YRVFDEVPIK-NLGMWNAMLIACAQHAHT 338
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 139/279 (49%), Gaps = 3/279 (1%)
Query: 22 LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L +KT D + + S + + + + R++F+ +P + +++ +I Y +
Sbjct: 177 VHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMP-HRNVVSWSGMIYGYTQLG 235
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGN 140
E+++LF E L GL ++FT V++ CG L+ +G +H L FK D ++G+
Sbjct: 236 EHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGS 295
Query: 141 TLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+L+ +Y+ C I+ A VF+E+P++++ W++M+ +A +F +M+ A P
Sbjct: 296 SLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRP 355
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N +T + ++ AC+ V G+ + +E ++V++ + G +++A V
Sbjct: 356 NFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVI 415
Query: 261 NLMREKNLQS-WTIMISGLADNGRGNYAISLFAKMIQTG 298
M + +S W I+G +G + A K+ + G
Sbjct: 416 KGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELG 454
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 241/448 (53%), Gaps = 26/448 (5%)
Query: 21 QLHTLFLKTSLDHNTCI---ISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +K +D +T I +S F S L F F + + ++ ++I +
Sbjct: 180 QVHAYLIKYHIDFDTSIGNSLSSFY--SKFRRLEFAIKAFKIIK-EKDVISWTSVISSCC 236
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ S+ F +ML G++P+ +T V+ AC L + +G +HSL K+G S
Sbjct: 237 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 296
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG-----------FVACDSPSDA 186
I N+++ +Y C + A+ +FE M ++V+W++MIAG A S S A
Sbjct: 297 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F ++ + P+ T S++S C++L+ + GE IH + +G+ DV +GTALV M
Sbjct: 357 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 416
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++KA K F M + + SWT MI+G A +G A+ LF M G+KP+ ++F
Sbjct: 417 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 476
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+LSACSH GL DE YF+ M + YNIKP M+H+ C++DM R G +EEA+ ++ M
Sbjct: 477 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 536
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLAASVSSLSGNW 422
EPN I + CR+HG+ +LG + LLKL+P+ YV ++ +G W
Sbjct: 537 FEPNETIWSMLIAGCRSHGK-----SDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRW 591
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + ++ + K+ SW+ + +
Sbjct: 592 KDVSKVRKLMKEEKVGKLKDWSWISIKE 619
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 45/374 (12%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+NLP + A+ TL+ Y + S + +++LF +ML+ G P N+T V+ AC
Sbjct: 115 VFDNLP-RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 173
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
I G VH+ + K +D D IGN+L Y+ + ++ A F+ + +DV+SW+S+I+
Sbjct: 174 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 233
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
+ +L F M PN TL S++SAC ++ + G IHS ++ G
Sbjct: 234 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 293
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISG-----------LADNGRG 284
+ + +++ +Y KCG + +A K+F M NL +W MI+G +A + G
Sbjct: 294 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 353
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY------------------- 325
+ A+++F K+ ++G+KPD +FS++LS CS+L +++G+
Sbjct: 354 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 413
Query: 326 ---------FDEMARVYNIKP--TMEHYGCMVDMLGRAGLIEEAYHIIRNMP---TEPNA 371
D+ ++ + P TM + M+ R GL ++A + +M +PN
Sbjct: 414 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 473
Query: 372 VILRSFLGACRNHG 385
V L AC + G
Sbjct: 474 VTFVGVLSACSHAG 487
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 132/229 (57%)
Query: 94 KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
K G R ++ Y +++ C L +H I K G D ++ L+ +Y+ C ++
Sbjct: 51 KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVME 110
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A VF+ +P R+V +W++++ G+V P AL++F +M A P++ TL +++AC+
Sbjct: 111 SAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 170
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
SL ++ G+ +H+Y + ++ D ++G +L YSK +E A K F +++EK++ SWT
Sbjct: 171 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
+IS DNG+ ++S F M+ G+KP+ + +++LSAC + +D G
Sbjct: 231 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLG 279
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IH + V G D+ + T LV +YSKCG +E A KVF+ + +N+ +WT +++G N
Sbjct: 80 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 139
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ LF KM++ G P + + +L+ACS L ++ GK + + Y+I
Sbjct: 140 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIK-YHIDFDTSIGN 198
Query: 344 CMVDMLGRAGLIE---EAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ + +E +A+ II+ E + + S + +C ++GQ
Sbjct: 199 SLSSFYSKFRRLEFAIKAFKIIK----EKDVISWTSVISSCCDNGQ 240
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 225/398 (56%), Gaps = 2/398 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + +P L ++NT++ Y++ E++KLF EM + PD T ++ +
Sbjct: 373 RQMFDGMS-SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 431
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+L+ G VH++ K +D Y+ + L+ MY+ C ++++AK +F+ + D+V W+SM
Sbjct: 432 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 491
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+AG +A F +M+ P+ + +++S C L ++ G +HS G
Sbjct: 492 MAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGY 551
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D +G+AL++MYSKCG V+ A VF++M KN +W MI G A NG G+ A+ L+
Sbjct: 552 MNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYED 611
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
MI +G KPD I+F A+L+ACSH GLVD G F+ M + + ++P ++HY C++D LGRAG
Sbjct: 612 MIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAG 671
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ EA +I MP + + +I L +CR + V L + L L+P+ A YVL A
Sbjct: 672 RLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADV-SLARRAAEELFHLDPQNSAPYVLLA 730
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
++ S G WD A + ++ + K PG SW++ +G
Sbjct: 731 NIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 768
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 172/345 (49%), Gaps = 27/345 (7%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF +P + ++NTLI A + +++ ++ M + G P +FT V+ ACG +
Sbjct: 93 LFAEMP-ERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALV 151
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G H + K+GLD++ Y+GN LL MYA C+ I A F ++P + VS+++M+
Sbjct: 152 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 211
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS--------------LINVRAG 221
G D ++A ++F M +SV+L S++ C+ L + G
Sbjct: 212 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 271
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +H + +G E D+ L +L++MY+K G+++ A +F M E ++ SW +MI+G
Sbjct: 272 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 331
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
+ + AI +M G +PD I++ +L AC G ++ G+ FD M+ P++
Sbjct: 332 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSS 386
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMP---TEPN----AVILRSFLG 379
+ ++ + +EA + R M P+ A+IL S G
Sbjct: 387 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 431
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 150/346 (43%), Gaps = 57/346 (16%)
Query: 34 NTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML 93
TCI + L I H RS ++ F N LI YAK + S +LFD+M
Sbjct: 13 QTCIDKKAHLAGKLIHAHMLRSRLSD-----DTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 94 KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEID 153
K D Y N +L Y E++
Sbjct: 68 KR---------------------------------------DIYTWNAILGAYCKASELE 88
Query: 154 VAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACT 213
A +F EMP R++VSW+++I+ AL V++RM P TL S++SAC
Sbjct: 89 DAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACG 148
Query: 214 SLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 273
+L++V G H ++ GL+ ++ +G AL+ MY+KC + A + F + E N S+T
Sbjct: 149 ALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTA 208
Query: 274 MISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---------KN 324
M+ GLAD+ + N A LF M++ + DS+S S++L CS G + G +
Sbjct: 209 MMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD 268
Query: 325 YFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMP 366
+ IK E ++DM + G ++ A I NMP
Sbjct: 269 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP 314
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 193/430 (44%), Gaps = 50/430 (11%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
LS VH Q+H L +K + + + + + + + + ++ +F N+P + ++N
Sbjct: 265 LSSDVHG-QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVS-VVSWN 322
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + S S ++I+ M G PD TY ++ AC K
Sbjct: 323 VMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----------------IKS 366
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G +I+ + +F+ M + SW+++++G+ ++ +A+K+F
Sbjct: 367 G-------------------DIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLF 407
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ + P+ TL ++S+ ++ + G +H+ + D+ L + L+ MYSKC
Sbjct: 408 REMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 467
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G VE A ++F+ + E ++ W M++GL+ N A + F KM + G+ P S++ +L
Sbjct: 468 GKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVL 527
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S C+ L + +G+ ++AR + ++DM + G ++ A + +M N
Sbjct: 528 SCCAKLSSLSQGRQVHSQIAREGYMNDAFVG-SALIDMYSKCGDVDAARWVF-DMMLGKN 585
Query: 371 AVILRSFL-----GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
V + C + +LY D ++ E G +V + S SG DT
Sbjct: 586 TVTWNEMIHGYAQNGCGDEAVLLYED-----MIGSGEKPDGITFVAVLTACSHSGLVDTG 640
Query: 426 AELMVAINQK 435
++ ++ Q+
Sbjct: 641 IKIFNSMQQE 650
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 50/282 (17%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR--C 114
F ++P P ++ ++ A + E+ +LF ML+ + D+ + V+ C R C
Sbjct: 195 FGDVP-EPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGC 253
Query: 115 LLIGI------------GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM 162
G+ G VH L K G +SD ++ N+LL MYA +D A+ +F M
Sbjct: 254 GEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNM 313
Query: 163 PVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGE 222
P VVSW+ MIAG+ S A++ RM+ P+ +T V+++ AC
Sbjct: 314 PEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI--------- 364
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
K G +E ++F+ M +L SW ++SG + N
Sbjct: 365 --------------------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNE 398
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
A+ LF +M + PD + + ILS+ + + L++ G+
Sbjct: 399 NHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQ 440
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 33/214 (15%)
Query: 205 LVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL-- 262
L SL+ C AG+ IH++ + + L D L L+E Y+KC ++ + ++F+
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 263 -----------------------------MREKNLQSWTIMISGLADNGRGNYAISLFAK 293
M E+N+ SW +IS L NG A+ ++ +
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G P + +++LSAC L V+ G+ ++ + + ++ M +
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKI-GLDNNIYVGNALLGMYAKCR 186
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
I +A ++P EPN V + +G + QV
Sbjct: 187 CIGDAIQAFGDVP-EPNEVSFTAMMGGLADSDQV 219
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 225/398 (56%), Gaps = 2/398 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + +P L ++NT++ Y++ E++KLF EM + PD T ++ +
Sbjct: 344 RQMFDGMS-SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 402
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+L+ G VH++ K +D Y+ + L+ MY+ C ++++AK +F+ + D+V W+SM
Sbjct: 403 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 462
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+AG +A F +M+ P+ + +++S C L ++ G +HS G
Sbjct: 463 MAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGY 522
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
D +G+AL++MYSKCG V+ A VF++M KN +W MI G A NG G+ A+ L+
Sbjct: 523 MNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYED 582
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
MI +G KPD I+F A+L+ACSH GLVD G F+ M + + ++P ++HY C++D LGRAG
Sbjct: 583 MIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAG 642
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+ EA +I MP + + +I L +CR + V L + L L+P+ A YVL A
Sbjct: 643 RLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADV-SLARRAAEELFHLDPQNSAPYVLLA 701
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDG 451
++ S G WD A + ++ + K PG SW++ +G
Sbjct: 702 NIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 33/402 (8%)
Query: 5 HIETLIQ--LSKTVHHLHQL-HTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNL 60
++ +L+Q + K H +L H L++ L +T + +R I + ++ +R LF+ +
Sbjct: 7 YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK--ACGRCLLIG 118
P ++ +N ++ AY K S ++ LF EM + + N + + ACG + +
Sbjct: 67 P-KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G H + K+GLD++ Y+GN LL MYA C+ I A F ++P + VS+++M+ G
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS--------------LINVRAGESI 224
D ++A ++F M +SV+L S++ C+ L + G+ +
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
H + +G E D+ L +L++MY+K G+++ A +F M E ++ SW +MI+G +
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
+ AI +M G +PD I++ +L AC G ++ G+ FD M+ P++ +
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWNT 360
Query: 345 MVDMLGRAGLIEEAYHIIRNMP---TEPN----AVILRSFLG 379
++ + +EA + R M P+ A+IL S G
Sbjct: 361 ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 402
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 193/430 (44%), Gaps = 50/430 (11%)
Query: 12 LSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYN 70
LS VH Q+H L +K + + + + + + + + ++ +F N+P + ++N
Sbjct: 236 LSSDVHG-QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVS-VVSWN 293
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + S S ++I+ M G PD TY ++ AC K
Sbjct: 294 VMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----------------IKS 337
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G +I+ + +F+ M + SW+++++G+ ++ +A+K+F
Sbjct: 338 G-------------------DIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLF 378
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
M+ + P+ TL ++S+ ++ + G +H+ + D+ L + L+ MYSKC
Sbjct: 379 REMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 438
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
G VE A ++F+ + E ++ W M++GL+ N A + F KM + G+ P S++ +L
Sbjct: 439 GKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVL 498
Query: 311 SACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPN 370
S C+ L + +G+ ++AR + ++DM + G ++ A + +M N
Sbjct: 499 SCCAKLSSLSQGRQVHSQIAREGYMNDAFVG-SALIDMYSKCGDVDAARWVF-DMMLGKN 556
Query: 371 AVILRSFL-----GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
V + C + +LY D ++ E G +V + S SG DT
Sbjct: 557 TVTWNEMIHGYAQNGCGDEAVLLYED-----MIGSGEKPDGITFVAVLTACSHSGLVDTG 611
Query: 426 AELMVAINQK 435
++ ++ Q+
Sbjct: 612 IKIFNSMQQE 621
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 226/388 (58%), Gaps = 9/388 (2%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ +I Y + + E +LF M++ + P++ T ++ +CG + +G +H+
Sbjct: 197 IVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHA 256
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I + G + L+ MY C EI A+A+F+ M +DV++W++MI+ + +
Sbjct: 257 YILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDY 316
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A ++F +M+ PN +T+VSL+S C + G+ H+Y G+E+DV L TAL++
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KCG + A ++F+ ++++ +W +M++G +G G A+ LF +M G+KP+ I+
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
F L ACSH GLV EGK F++M + + P +EHYGCMVD+LGRAGL++EAY +I +M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 366 PTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGN 421
P PN I + L AC+ H + N+G+L LL LEP+ VL +++ + +
Sbjct: 497 PVTPNIAIWGAMLAACKIHK-----NSNMGELAARELLALEPQNCGYKVLMSNIYAAANR 551
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVN 449
W+ A + A+ G+ K PG S ++VN
Sbjct: 552 WNDVAGMRKAVKDTGIKKEPGMSSIEVN 579
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 173/341 (50%), Gaps = 47/341 (13%)
Query: 51 HFTRSLFNN---LPVTP----PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFT 103
H TR+ FN+ + +P P +A NT + M K + D+F
Sbjct: 69 HITRTHFNHAQQVSFSPFESHPRYALNT-----------------YTYMRKLDIEVDSFI 111
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
P V+KAC + + +G +H K GL SD ++ N L++MY+ C + A+ +F++M
Sbjct: 112 IPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMS 171
Query: 164 VRDVVSWSSMI----------------------AGFVACDSPSDALKVFHRMKLANESPN 201
RDVVSWS+MI AG++ C+ + ++F RM N PN
Sbjct: 172 ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPN 231
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T++SL+ +C + V+ G+ +H+Y + NG + +AL TALV+MY KCG + A +F+
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD 291
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M+ K++ +WT MIS A +YA LF +M G++P+ ++ ++LS C+ G +D
Sbjct: 292 SMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDM 351
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
GK +F ++ + ++DM + G I A +
Sbjct: 352 GK-WFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 220/388 (56%), Gaps = 5/388 (1%)
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
L P F +N +IR+Y + +++++ ML+ G+ PD +T P V+KA + I +
Sbjct: 56 LESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQL 115
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G VHS K+GL S++Y + + +Y + D A VF+E + SW+++I+G
Sbjct: 116 GQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQ 175
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY---AVVNGLELD 236
DA+ VF MK P+ +T+VS++SAC S+ ++ +H Y A N +
Sbjct: 176 GGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTV- 234
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ + +L++MY KCG ++ A++VF M ++N+ SWT MI G A +G A+ F M +
Sbjct: 235 ILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRE 294
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+G+KP+ ++F +LSAC H G V EG+ YFD M +Y I P ++HYGCMVD+LGRAGL +
Sbjct: 295 SGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFD 354
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
+A ++ MP +PN+V+ +GAC HG V + + + + L LEP YV+ +++
Sbjct: 355 DARRMVEEMPMKPNSVVWGCLMGACEKHGNV-DMAEWVAENLQALEPWNEGVYVVLSNIY 413
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ G W + + + L K+P S
Sbjct: 414 ANKGLWKEVERIRSFMKEGRLAKIPAYS 441
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 249/433 (57%), Gaps = 4/433 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L +LH LK +N + + F+ + SL + + +F+ + + + ++N LI +A
Sbjct: 769 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHA 827
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+++ S+ +M +GL PD+FT ++ AC + + +G VH I + L+ D +
Sbjct: 828 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 887
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ ++L +Y C E+ +A+F+ M + +VSW+++I G++ P AL VF +M L
Sbjct: 888 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 947
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
++++ + AC+ L ++R G H+YA+ + LE D + +L++MY+K G + ++
Sbjct: 948 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 1007
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
KVFN ++EK+ SW MI G +G AI LF +M +TG PD ++F +L+AC+H G
Sbjct: 1008 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 1067
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII-RNMPTEPNAVILRS 376
L+ EG Y D+M + +KP ++HY C++DMLGRAG +++A ++ M E + I +S
Sbjct: 1068 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 1127
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
L +CR H Q L + + + L +LEPE NYVL +++ + G W+ ++ +N+
Sbjct: 1128 LLSSCRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 1186
Query: 437 LNKVPGCSWVKVN 449
L K GCSW+++N
Sbjct: 1187 LRKDAGCSWIELN 1199
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 14/314 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFA 68
I++ + +H L + T L ++ + +R I + ++ S +R +F+ L + LF
Sbjct: 455 IEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR-SKNLFQ 508
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+N +I +Y++ E ++ F EM+ T L PD+FTYP V+KAC +GIG +VH L+
Sbjct: 509 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 568
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL D ++GN L+ Y + A +F+ MP R++VSW+SMI F ++
Sbjct: 569 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 628
Query: 188 KVFHRMKLANES----PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+ M N P+ TLV+++ C + G+ +H +AV L+ ++ L AL
Sbjct: 629 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 688
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG--LKP 301
++MYSKCG + A +F + KN+ SW M+ G + G + + +M+ G +K
Sbjct: 689 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 748
Query: 302 DSISFSAILSACSH 315
D ++ + C H
Sbjct: 749 DEVTILNAVPVCFH 762
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 136/276 (49%), Gaps = 7/276 (2%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKT----GLRPDNFTYPFVVKA 110
LF+ +P L ++N++IR ++ S ES L EM++ PD T V+
Sbjct: 598 QLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 656
Query: 111 CGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
C R IG+G VH K+ LD + + N L+ MY+ C I A+ +F+ ++VVSW
Sbjct: 657 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAGESIHSYA 228
++M+ GF A V +M E + VT+++ V C + + + +H Y+
Sbjct: 717 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 776
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + + A V Y+KCG + A +VF+ +R K + SW +I G A + ++
Sbjct: 777 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 836
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+M +GL PDS + ++LSACS L + GK
Sbjct: 837 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 872
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 208 LVSACTSLINVRAGESIHSYAVVNG---LELDVALGTALVEMYSKCGHVEKAFKVFNLMR 264
L+ A ++ G IH +V+G L D L T ++ MY+ CG + + VF+ +R
Sbjct: 445 LLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 502
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGK 323
KNL W +IS + N + + F +MI T L PD ++ ++ AC+ + V G
Sbjct: 503 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 562
Query: 324 NYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRN 383
+ + ++ +V G G + +A + MP E N V S + +
Sbjct: 563 AVHGLVVKTGLVEDVFVG-NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSD 620
Query: 384 HG 385
+G
Sbjct: 621 NG 622
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 229/424 (54%), Gaps = 35/424 (8%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ + + ++ T+I Y + E+++++ ML+TG P+ +V ACGR
Sbjct: 271 RELFDGI-CDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGR 329
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFE------------- 160
I G +H + K G D +I T++ YAAC +D+A FE
Sbjct: 330 GTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNAL 389
Query: 161 ------------------EMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
+M VRDV SWS+MI+G+ + P AL++FH+M PN
Sbjct: 390 TAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNE 449
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
VT+VS+ SA +L ++ G+ H Y + + L AL++MY+KCG + A + FN
Sbjct: 450 VTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQ 509
Query: 263 MREK--NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+R++ ++ W +I GLA +G + + +F+ M + +KP+ I+F +LSAC H GLV+
Sbjct: 510 IRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVE 569
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
GK F M YN++P ++HYGCM+D+LGRAGL+EEA +IR+MP E + VI + L A
Sbjct: 570 SGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAA 629
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR HG V + + + L +L P G VL +++ + +G W+ + + + + +++
Sbjct: 630 CRTHGNV-NIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDRE 688
Query: 441 PGCS 444
PG S
Sbjct: 689 PGYS 692
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 160/381 (41%), Gaps = 64/381 (16%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R LF+ +P +Y T+I + + E++++F +M G+ P++ T V+ AC
Sbjct: 139 RKLFDVMP-NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSH 197
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-------- 165
+ VH L+ K+ + + L+ Y C + A+ +F+EMP R
Sbjct: 198 LGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVM 257
Query: 166 -----------------------DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
DV+SW +MI G++ +AL+++ M PN
Sbjct: 258 LNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNE 317
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCG----------- 251
V +V+LVSAC + G +H V G + + T ++ Y+ CG
Sbjct: 318 VMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEV 377
Query: 252 ----HVEK----------------AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
H+E A K F+ M +++ SW+ MISG A + A+ LF
Sbjct: 378 GVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELF 437
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
KM+ G+KP+ ++ ++ SA + LG + EGK E R +I ++DM +
Sbjct: 438 HKMLAGGIKPNEVTMVSVFSAIATLGTLQEGK-LAHEYMRSESIPFNDNLRAALIDMYAK 496
Query: 352 AGLIEEAYHIIRNMPTEPNAV 372
G I A + E ++V
Sbjct: 497 CGSINSALQFFNQIRDEVSSV 517
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 80/311 (25%)
Query: 108 VKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAAC------------------ 149
+K+C I G +HSLIFK+GL + +I N+L+ MYA C
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 150 -------------KEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ID A+ +F+ MP + VS+++MI GFV +AL+VF M+
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAV---VNGLELDVALGTALVEMYSKCGHV 253
PN +TLV+++SAC+ L V +H V V GL V + T L+ Y C V
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGL---VIVSTNLMHAYCLCSGV 236
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+A ++F+ M E+NL +W +M++G A
Sbjct: 237 REARRLFDEMPERNLVTWNVMLNGYAKT-------------------------------- 264
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PN 370
GLVDE + FD + I +G M+D + G + EA I R M PN
Sbjct: 265 ---GLVDEARELFDGICDKDVIS-----WGTMIDGYIQKGRLREALEIYRAMLQTGHGPN 316
Query: 371 AVILRSFLGAC 381
V++ + + AC
Sbjct: 317 EVMIVNLVSAC 327
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC------ 250
N + + LVS + +C+SL + G IHS GL + + +L+ MY+KC
Sbjct: 48 NHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNA 107
Query: 251 -------------------------GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
G ++ A K+F++M K S+T MI G NG
Sbjct: 108 QLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFR 167
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
A+ +F M G+ P+ ++ ++SACSHLG V
Sbjct: 168 EALEVFKDMRSCGVVPNDLTLVNVISACSHLGEV 201
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 263/473 (55%), Gaps = 45/473 (9%)
Query: 6 IETLIQLS-KTVHHLHQLHTLFLKTS---------LDHNTCIISRFILTSLSISLHFTRS 55
+TL+ ++HH+ QLH + + L H+ C S S H+ +
Sbjct: 14 FDTLLHFKPNSIHHIKQLHAHLITNAVSSPPLLAKLIHHYCAFS---------SPHYAYT 64
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLF-DEMLKTGLRPDNFTYPFVVKACGRC 114
F +L +P LF +NTLI+ +S SI +F D + + L D+FTY F + AC R
Sbjct: 65 FFIHLR-SPNLFLFNTLIKCLPPSS----SILVFADWVSREALVFDDFTYIFALGACARS 119
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G +H+ I K G+ S+ + T + YA ++ +A+ VF+EM R V+W++MI
Sbjct: 120 PSLWEGRQIHARILKQGVWSNVLVQTTAIHFYANNNDVALARLVFDEMRKRSSVTWNAMI 179
Query: 175 AGF------VACDSPSDALKVFHRMKL--ANESPNSVTLVSLVSACTSLINVRAGESIHS 226
G+ V C + DAL +F M + P T+V ++SA + L + G +H
Sbjct: 180 TGYCSQRGKVVCYA-RDALVLFRAMLVDACGVKPTDTTMVCVLSAASQLGVLETGVGVHG 238
Query: 227 Y--AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
Y V DV +GT LV+MYSKCG + A +F M+E+N+ +WT MI+GLA +GRG
Sbjct: 239 YIEKTVLAPANDVFVGTGLVDMYSKCGCLGSALCIFWGMKERNVLTWTAMITGLARHGRG 298
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ L +M+ G+KP++++F+++ SAC H GLV+EG F M + + P ++HYGC
Sbjct: 299 KEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGC 358
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
+VD+LGRAG ++EAY +R MP EP+A++ RS L AC+ H V+ + + +GKLLL+L+P+
Sbjct: 359 IVDLLGRAGHLKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVV-MGEEVGKLLLQLQPQ 417
Query: 405 LGANYVLAAS--------VSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
++AAS V + + W+ + A+ KG+ PGCS V+ +
Sbjct: 418 QSFADLVAASEDFIALSNVYASAERWEDVETVREAMKVKGIETKPGCSSVQTS 470
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 231/428 (53%), Gaps = 34/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
+ LF+ V L YNT++ YA+ + E++ + DEML+ G RPD T + A
Sbjct: 286 AKRLFDEC-VDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASA 344
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK---------------------- 150
+ + + G H + + GL+ IGN ++ MY C
Sbjct: 345 QLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNS 404
Query: 151 ---------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
+++ A VF ++P R+ V W++MI+G V DA+++F M+ +
Sbjct: 405 LTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKAD 464
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
VT++ + SAC L + +H+Y NG+ D+ L TALV+M+++CG + A +VFN
Sbjct: 465 RVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFN 524
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
M E+++ +WT I +A G G A LF +M+ G+KPD + F +L+ACSH G V++
Sbjct: 525 KMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQ 584
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G + F M + I P +EHYGCMVD+LGRAGL+ EA+ +I++MP EPN V+ S L AC
Sbjct: 585 GLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAAC 643
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R H V + + + +L P+ +VL +++ + +G W A + + + +KG+ KVP
Sbjct: 644 RVHKNV-EMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVP 702
Query: 442 GCSWVKVN 449
G S V+VN
Sbjct: 703 GSSSVQVN 710
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 193/364 (53%), Gaps = 17/364 (4%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI----SLHFTRSLFN----NLP 61
++ KT++ L QLH K LD +++ + I SL + R F ++
Sbjct: 32 LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
LF N+LIR Y+ E+I L+ ML G+ P+++T+PFV+ C + G
Sbjct: 92 SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGI 151
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH + K+GL+ D +I N L+ YA C +D VFE M R+VVSW+S+I G+ D
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
P +A+ +F M A P+SVT+V ++SAC L ++ GE + +Y GL+L+ +
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
ALV+MY KCG ++ A ++F+ ++NL + ++S A G A+++ +M+Q G +P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEE 357
D ++ + +SA + LVD ++ ++ Y I+ +E + ++DM + G E
Sbjct: 332 DRVTMLSAISASAQ--LVDL---FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEM 386
Query: 358 AYHI 361
A +
Sbjct: 387 ACRV 390
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 32/331 (9%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+ ++ +LI YA+ E++ LF EM++ G+RP + T V+ AC + + +G V +
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCA 256
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
I ++GL +K + N L+ MY C ID AK +F+E R++V ++++++ + +
Sbjct: 257 YIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE 316
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL + M P+ VT++S +SA L+++ G+ H Y + NGLE ++G +++
Sbjct: 317 ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIID 376
Query: 246 MYSKCGH-------------------------------VEKAFKVFNLMREKNLQSWTIM 274
MY KCG VE A++VFN + E+N W M
Sbjct: 377 MYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTM 436
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISGL AI LF +M G+K D ++ I SAC +LG + K +
Sbjct: 437 ISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAK-WVHTYIEKNG 495
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
I M +VDM R G + A + M
Sbjct: 496 IPCDMRLNTALVDMFARCGDPQSAMQVFNKM 526
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 248/450 (55%), Gaps = 3/450 (0%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLF 67
T+I L HL H +KT + +I+ + + + L NL L
Sbjct: 257 TIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLV 316
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+ +I YA+ ++ F +ML+ ++PD ++ IG G +H+
Sbjct: 317 SLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYG 376
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K GL +D + N L+ MY+ +I+ ++F EM + ++SW+S+I+ + SDA+
Sbjct: 377 LKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAM 436
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
++F +M++ SP+++T+ SL++ C+ + ++ GE +H+Y + N L+++ L TALV+MY
Sbjct: 437 ELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMY 496
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG +E A +VF ++E L +W MISG +G + A+S +++M + GLKPD I+F
Sbjct: 497 IKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFL 556
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LSAC+H GLV EGK YF M + + P ++H CMVD+L RAG +EEA ++NM
Sbjct: 557 GVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEV 616
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
EP++ I + L +C H Q L L + L K LL L+ G YVL +++ + G WD A
Sbjct: 617 EPDSAIWGALLTSCCIH-QELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVAR 675
Query: 428 LMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
+ + G + G S ++V+ S E+M+
Sbjct: 676 VRKMMKDTGGDGSSGISLIEVS--SLEKMN 703
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 172/342 (50%), Gaps = 19/342 (5%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+++ + LF +P + ++N LI Y++ +++++F +ML+ G P T +V
Sbjct: 104 IYYAQHLFEEMP-RRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVP 162
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+CGR +I G ++H K GLD D + N L MYA C ++ A+ +FEE+ + VS
Sbjct: 163 SCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVS 222
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W++MI + +A+ VF +M+ N VT++SL+SA L +S H Y +
Sbjct: 223 WNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHL------DSTHCYVI 276
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G D ++ T+LV Y+ CG++E A ++NLM ++NL S T MISG A+ G +
Sbjct: 277 KTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVE 336
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMV--- 346
F +M+Q +KPD+++ +IL + + G Y +K + C+V
Sbjct: 337 CFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLG-----IHAYGLKTGL-CADCLVVNG 390
Query: 347 --DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
M + G IE + + M E + S + AC G+
Sbjct: 391 LISMYSKFGDIETVFSLFSEMG-EKQLISWNSVISACIQVGR 431
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 104/195 (53%)
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+ + + K G + Y+ L Y I A+ +FEEMP RDVVSW+++I G+
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
DAL+VF +M P TLV LV +C + G++IH + + +GL+LD +
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL MY+KC ++ A +F + EK SW MI NG + A+ +F +M + ++
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253
Query: 302 DSISFSAILSACSHL 316
+ ++ ++LSA +HL
Sbjct: 254 NYVTIISLLSANAHL 268
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 223 SIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG 282
I ++ +G V L TA ++ Y K G + A +F M +++ SW +I G + NG
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 283 RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG--------KNYFDEMARVYN 334
A+ +F +M++ G P + ++ +C ++ +G K+ D RV N
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193
Query: 335 ----------------------IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP--- 369
+ T + M+ G+ GL +EA + + M E
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253
Query: 370 NAVILRSFLGA 380
N V + S L A
Sbjct: 254 NYVTIISLLSA 264
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 264/477 (55%), Gaps = 23/477 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPP 65
++TL Q + L Q+HT + T L T +S I S +L + +FN + P
Sbjct: 152 LQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSKFNLPYAFKIFNYIS-NPT 210
Query: 66 LFAYNTLIRAYAKTSCSIE---SIKLFDEML-KTGLRPDNFTYPFVVKAC-GRCLLIGIG 120
+F YNTLI + + + + L++++L L+P++FT+P + KAC G
Sbjct: 211 IFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYG 270
Query: 121 GSVHSLIFK-VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
+H+ + K + D ++ +LL YA ++ V++ +F+ + D+ +W+ ++ +
Sbjct: 271 PLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYAR 330
Query: 180 -------------CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
D ++L +F M++ PN VT+V+L+SAC++L V G +H
Sbjct: 331 SSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHC 390
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS--WTIMISGLADNGRG 284
+ + N ++++ +GTA V+MYSKCG + A +VF+ M E + S +T MI G A +G G
Sbjct: 391 FVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYG 450
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
N A+ L+ KM GL PDS +F + ACSH+GLV+EG F M V+ ++P +EHYGC
Sbjct: 451 NQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGC 510
Query: 345 MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
++D+LGRAG ++EA + +MP +PNAV+ RS LGA R HG + + L K L++LEPE
Sbjct: 511 LIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTK-LIELEPE 569
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
NYVL +++ + G + + + G+NK+PG S V++ E ++ + +
Sbjct: 570 TSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRS 626
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 232/406 (57%), Gaps = 7/406 (1%)
Query: 42 ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN 101
+L I H R+ N L P F +N +IR+Y + ++ ++ ML+ G+ PD
Sbjct: 207 VLELYQIHAHVLRT--NMLENHPSSFYWNIIIRSYTRLEVPRIALFVYIAMLQAGILPDC 264
Query: 102 FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEE 161
+T P V KA +G +HS+ ++G + D+Y + L+ +Y+ +++ A VFE+
Sbjct: 265 YTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSKIGDLECACKVFEQ 324
Query: 162 MPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
R + SW+++IAG +A+ +F +++ + P+ T+VS+ SAC SL N+
Sbjct: 325 NHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSVTSACGSLGNLELS 384
Query: 222 ESIHSYAV---VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
+H + V G + ++ + +L++MY KCG ++ A KVF+ M +N+ SWT +I G
Sbjct: 385 LQMHKFVFQVKVTG-KSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHRNVSSWTSLIVGY 443
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A +G+ A+ F M + G+ P+ ++F +LSAC H G+++EGK+YFD M VY KP
Sbjct: 444 AMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQ 503
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+ HYGCMVD+L +AGL+EEA +I MP + N++I +G C HG V + + GK L
Sbjct: 504 LPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNV-EIGEWAGKHL 562
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
+LEP YV+ +++ + +G W A ++ + Q+ L KVPG S
Sbjct: 563 QELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYS 608
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 231/402 (57%), Gaps = 3/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R++F ++ P L A+N +I +A S + ES F +M TGL P++ T ++
Sbjct: 352 LESARTVFYHIE-KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLC 410
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVV 168
AC +++ G VHS I K+G + D + N+LL MY+ C ++ A VFE++ + D+V
Sbjct: 411 ACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIV 470
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++++ + + + L++ M + P+ VTL +++ + + + G IH +
Sbjct: 471 SWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFI 530
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ +GL LD+++ AL+ MY+KCG +E A K+F+ + ++ SW+ +I G A G G A
Sbjct: 531 MKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAF 590
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF M G+KP+ I+F IL+ACSH+G+V+EG + M Y I PT EH CMVD+
Sbjct: 591 ELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDL 650
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L RAG ++ A IR MP P+ V+ ++ L AC+ HG L + + +LK++P A
Sbjct: 651 LARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGN-LEVGKRAAENVLKIDPSNSAA 709
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
V+ ++ + SG+W A L ++ + + KVPG SW+++ D
Sbjct: 710 VVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKD 751
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 169/357 (47%), Gaps = 35/357 (9%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVH 124
L ++ ++I +++ +E++ F EML + +P+ F + AC + L G +H
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIH 324
Query: 125 SLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
L K GL SD + G +L MYA C ++ A+ VF + D+V+W+++IAGF + +
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
++ F +M+ PN VT++SL+ AC+ + + G +HSY V G LD+ + +L+
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLL 444
Query: 245 EMYSKCGHVEKAFKVF-NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
MYSKC ++ A +VF ++ + ++ SW +++ + + L M + +KPD
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504
Query: 304 ISFSAILSACSHLGLVDEGKNYF---------------DEMARVYNIKPTMEHYGCMVDM 348
++ + +L + + + G + + +Y ++E M D
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564
Query: 349 LG---------------RAGLIEEAYHIIRNMP---TEPNAVILRSFLGACRNHGQV 387
+G +AG +EA+ + R M +PN + L AC + G V
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMV 621
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 10/328 (3%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP-DNFTYPFVVKAC 111
T+ F+ P+T + ++ I + K + E++K FD K P + TY ++ AC
Sbjct: 50 TQLAFSPCPLTVH-YPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINAC 108
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWS 171
+ G +H + D + N +L MY C + A+ +F+ MP+++VVSW+
Sbjct: 109 SSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWT 168
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
SMI+G+ +A+ ++ +M + P+ T S+V +C+ L + + +H++ + +
Sbjct: 169 SMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKS 228
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
D+ AL+ MY+K + A VF+ + K+L SW MI+G + G A+ F
Sbjct: 229 EFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHF 288
Query: 292 AKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC-MVDML 349
+M+ Q+ +P+ F + SACS L D G+ + + + + GC + DM
Sbjct: 289 REMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQ-IHGLCIKFGLGSDL-FAGCSLCDMY 346
Query: 350 GRAGLIEEA----YHIIRNMPTEPNAVI 373
+ G +E A YHI + NA+I
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAII 374
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 145/323 (44%), Gaps = 44/323 (13%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIR 74
++H Q+H+ +K + + + + + + S +L+ +F ++ + ++NTL+
Sbjct: 418 LNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLT 477
Query: 75 AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
A + + + E ++L M + ++PD+ T V+ + G+ +G +H I K GL+
Sbjct: 478 ACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL 537
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK 194
D + N L+ MY C ++ A+ +F+ + D++SWSS+I G+ +A ++F M+
Sbjct: 538 DISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMR 597
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
PN +T V +++AC+ + G VE
Sbjct: 598 GLGVKPNEITFVGILTACSHI-----------------------------------GMVE 622
Query: 255 KAFKVFNLMREKNLQSWT-----IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
+ K++ M+E S T M+ LA G + A +M PD + + +
Sbjct: 623 EGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQM---PFVPDVVVWKTL 679
Query: 310 LSACSHLGLVDEGKNYFDEMARV 332
L+AC G ++ GK + + ++
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKI 702
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 226/382 (59%), Gaps = 2/382 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +I Y +I+++++F ++K + P+ T ++ G L + +G +H I
Sbjct: 405 FTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFII 464
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D+ IG ++ MYA C +++A +F + RD+VSW+SMI D+PS A+
Sbjct: 465 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAID 524
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M ++ + V++ + +SAC +L + G++IH + + + L LDV + L++MY+
Sbjct: 525 IFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYA 584
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFS 307
KCG+++ A VF+ M+EKN+ SW +I+ ++G+ ++ LF +M++ +G +PD I+F
Sbjct: 585 KCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFL 644
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
I+S C H+G VDEG +F M + Y I+P EHY C+VD+ GRAG + EAY +++MP
Sbjct: 645 EIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPF 704
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A + + LGA R H V L L+ L+P YVL ++ + +G W++ +
Sbjct: 705 PPDAGVWGTLLGASRLHKNV-ELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTK 763
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + ++ + K+PG SW+++N
Sbjct: 764 VRSLMKEREVQKIPGYSWIEIN 785
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 142/250 (56%), Gaps = 4/250 (1%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG--SVHSL 126
+N++I ++ + +++ + +ML G+ PD T+P +VKAC L G +
Sbjct: 102 WNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC--VALKNFKGIEFLSDT 159
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ +G+D ++++ ++L++ Y +IDVA +F+ + +D V W+ M+ G+ C +
Sbjct: 160 VSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSV 219
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+K F M++ SPN+VT ++S C S + + G +H VV+GL+ + ++ +L+ M
Sbjct: 220 IKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSM 279
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YSKCG + A K+F +M + +W MISG +G ++ F +MI +G+ PD+I+F
Sbjct: 280 YSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITF 339
Query: 307 SAILSACSHL 316
S++L + S
Sbjct: 340 SSLLPSVSKF 349
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 170/319 (53%), Gaps = 2/319 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I Y ++ ES+ F EM+ +G+ PD T+ ++ + + + +H I
Sbjct: 304 WNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIM 363
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + D ++ + L+ Y C+ + +A+ +F + DVV +++MI+G++ DAL+
Sbjct: 364 RHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALE 423
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F + SPN +TLVS++ L+ ++ G +H + + G + +G A+++MY+
Sbjct: 424 MFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 483
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + A+++F + ++++ SW MI+ A + + AI +F +M +G+ D +S SA
Sbjct: 484 KCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISA 543
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
LSAC++L GK M + +++ + ++DM + G ++ A ++ M E
Sbjct: 544 ALSACANLPSESFGKAIHGFMIK-HSLALDVYSESTLIDMYAKCGNLKAAMNVFDTM-KE 601
Query: 369 PNAVILRSFLGACRNHGQV 387
N V S + A NHG++
Sbjct: 602 KNIVSWNSIIAAYGNHGKL 620
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 147/298 (49%), Gaps = 9/298 (3%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ YAK S IK F M + P+ T+ V+ C LLI +G +H L+
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 262
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
GLD + I N+LL MY+ C D A +F M D V+W+ MI+G+V ++L
Sbjct: 263 VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLI 322
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F+ M + P+++T SL+ + + N+ IH Y + + + LD+ L +AL++ Y
Sbjct: 323 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYF 382
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC V A K+F+ ++ +T MISG NG A+ +F +++ + P+ I+ +
Sbjct: 383 KCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVS 442
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTME---HYGC-MVDMLGRAGLIEEAYHII 362
IL L + G+ + IK + + GC ++DM + G + AY I
Sbjct: 443 ILPVIGGLLALKLGRELHG-----FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 136/308 (44%), Gaps = 35/308 (11%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+++ C L+ G VH+ + + D Y +L MYA C +F + R
Sbjct: 36 LLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSR 95
Query: 166 --DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ W+S+I+ FV + AL + +M SP+ T LV AC +L N + E
Sbjct: 96 LSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF 155
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+ G++ + + ++L++ Y + G ++ A K+F+ + +K+ W +M++G A G
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG------------------KN- 324
+ I F+ M + P++++F +LS C+ L+D G KN
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNS 275
Query: 325 ---------YFDEMARVYNI--KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PN 370
FD+ +++ + + + CM+ ++GL+EE+ M + P+
Sbjct: 276 LLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPD 335
Query: 371 AVILRSFL 378
A+ S L
Sbjct: 336 AITFSSLL 343
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 234/407 (57%), Gaps = 11/407 (2%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+F +P + ++ +I YA++ S E+I++F M + + P+ FT +++AC
Sbjct: 302 QVFEEMP-KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASL 360
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ + +G +H + KVGLD + ++ N L+ MYA C ++ + +F E P VSW+++I
Sbjct: 361 VDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVI 420
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G+V + AL +F M VT S++ AC + + G IHS +V +
Sbjct: 421 VGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYD 480
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+ +G AL++MY+KCG+++ A VF+++RE + SW MISG + +G A+ F M
Sbjct: 481 KNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESM 540
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
++T KPD ++F ILSACS+ GL+D G+ YF M Y+I+P EHY CMV +LGR+G
Sbjct: 541 LETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGH 600
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYV 410
+++A ++ +P EP+ ++ R+ L AC V++ D LG++ +L++EPE A +V
Sbjct: 601 LDKAAKLVHEIPFEPSVMVWRALLSAC-----VIHNDVELGRISAQRVLEIEPEDEATHV 655
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMS 457
L +++ + + W A + ++ +KG+ K PG SW++ N G S
Sbjct: 656 LLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIE-NQGRVHYFS 701
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 177/332 (53%), Gaps = 3/332 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + + ++ ++ Y + C ES+KLF M G +P+NFT+ V+KAC
Sbjct: 200 RQVFDAIEYKD-MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVG 258
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ +G +VH FK + ++G L+ +Y ++D A VFEEMP DV+ WS M
Sbjct: 259 LEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFM 318
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IA + + +A+++F RM+ PN TL SL+ AC SL++++ G IH + V GL
Sbjct: 319 IARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGL 378
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+++V + AL++MY+KCG +E + ++F+ SW +I G G G A+ LF
Sbjct: 379 DMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKD 438
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M++ ++ +++S++L AC+ + ++ G + K T+ ++DM + G
Sbjct: 439 MLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVG-NALIDMYAKCG 497
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
I++A ++ +M E + V + + HG
Sbjct: 498 NIKDA-RLVFDMLREHDQVSWNAMISGYSVHG 528
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 164/318 (51%), Gaps = 2/318 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL LF+ +P + ++ TLI+ Y++ E+I LF + G + F + V+
Sbjct: 94 SLPDAAKLFDEMPDRNTV-SFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
K +G SVH+ ++K+G DSD ++G L+ Y+ C + A+ VF+ + +D+V
Sbjct: 153 KLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMV 212
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ M+A +V + ++LK+F RM++ PN+ T S++ AC L G+++H A
Sbjct: 213 SWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA 272
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
++ +G L+++Y K G V+ A +VF M + ++ W+ MI+ A + + AI
Sbjct: 273 FKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAI 332
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M + + P+ + +++L AC+ L + G + +V + + ++DM
Sbjct: 333 EMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKV-GLDMNVFVSNALMDM 391
Query: 349 LGRAGLIEEAYHIIRNMP 366
+ G +E + + P
Sbjct: 392 YAKCGRMENSLQLFSESP 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 21/290 (7%)
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
+ + Y ++++C R G +H I K G D + N LL Y + A +F
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+EMP R+ VS+ ++I G+ C S+A+ +F R++ N +++ S +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G S+H+ G + D +GTAL++ YS CG+ E A +VF+ + K++ SWT M++
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK---------NYFDEMA 330
+N ++ LF++M G KP++ +F+++L AC L + + GK +Y +E+
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++D+ ++G +++A + MP + VI SF+ A
Sbjct: 283 VGVE----------LIDLYIKSGDVDDALQVFEEMPKDD--VIPWSFMIA 320
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L +KT D NT + + I + + ++ R +F+ L + ++N +I Y+
Sbjct: 469 QIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQV-SWNAMISGYSVH 527
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGS-VHSLIFKVGLDSDKYI 138
E++K F+ ML+T +PD T+ ++ AC L+ G + S++ + ++
Sbjct: 528 GLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEH 587
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFV 178
++ + +D A + E+P V+ W ++++ V
Sbjct: 588 YTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACV 628
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 195/316 (61%), Gaps = 2/316 (0%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN-E 198
NT+L YA +++ + +FEEMP R+V SW+ +I G+ + L+ F RM +
Sbjct: 255 NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLV 314
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
PN TLV+++SAC L + G+ +H YA G + + +G AL++MYSKCG +E A +
Sbjct: 315 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 374
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M K+L +W MI GLA +G G A++LF +M G KPD I+F +L +C+HLGL
Sbjct: 375 VFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGL 434
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V+EG +YF+ M Y+I P +EHYGCMVD+ GRAGL++ A ++ MP E +AVI + L
Sbjct: 435 VEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
GACR + + + L KL++ LEP+ ANYVL +++ G W A L + + G
Sbjct: 495 GACRIYKNIDLAELALQKLIV-LEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSK 553
Query: 439 KVPGCSWVKVNDGSAE 454
K+PGCS ++VND E
Sbjct: 554 KLPGCSLIEVNDSVVE 569
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 186/387 (48%), Gaps = 13/387 (3%)
Query: 1 MISRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNN 59
++ H +L++ KTV L ++ + +N + + + + + + R LF++
Sbjct: 23 VLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDH 82
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P P + +N + R Y + E + LF +M +RP+ FT+P V+K+C +
Sbjct: 83 FP-DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVE 141
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H + K GL+ ++++ TL+ +Y+ + I A +F M R++V+W+SMI+G++
Sbjct: 142 GEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYIL 201
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
C+ + A ++F LA E + V +VS + +++A + D
Sbjct: 202 CNRVALARRLF---DLAPER-DVVLWNIMVSGYIEIGDMKAARKLFDTMPYR----DTMS 253
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
++ Y+ G VE ++F M E+N+ SW +I G A NG + F +M+ GL
Sbjct: 254 WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGL 313
Query: 300 -KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
P+ + +LSAC+ LG +D GK + A K ++ ++DM + GLIE A
Sbjct: 314 VVPNDATLVTVLSACARLGALDLGK-WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 372
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHG 385
+ +M + + + S + HG
Sbjct: 373 MEVFESMDLK-DLITWNSMICGLATHG 398
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACG 112
LF +P +F++N LI YA C E ++ F ML GL P++ T V+ AC
Sbjct: 271 EQLFEEMP-ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACA 329
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R + +G VH +G Y+GN L+ MY+ C I+ A VFE M ++D+++W+S
Sbjct: 330 RLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNS 389
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES-----IHSY 227
MI G +DAL +FH+MK+ E P+ +T + ++ +CT L V G S ++ Y
Sbjct: 390 MICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEY 449
Query: 228 AVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
++ +E +V+++ + G +++A + M
Sbjct: 450 SIAPQIEHY----GCMVDLFGRAGLLDRAIEFVKRM 481
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 15/213 (7%)
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A + P V +S S V + + + + +G + + + +V + +
Sbjct: 16 AQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAH 75
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A +F+ + ++ W + G N + LF KM ++P+ +F +L +C+
Sbjct: 76 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAK 135
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNA 371
+G EG+ E+ IK +E ++D+ I AY + M E N
Sbjct: 136 IGAFVEGEEIHCEV-----IKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNI 189
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE 404
V S + G +L L + L L PE
Sbjct: 190 VAWTSMIS-----GYILCNRVALARRLFDLAPE 217
>gi|359481497|ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Vitis vinifera]
Length = 510
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 198/331 (59%), Gaps = 2/331 (0%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G H L + G + Y+G+ L+ Y+ C E+ A VFEEMPV++VVSW+++IAGF
Sbjct: 132 GVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVFEEMPVKNVVSWTAIIAGFAQ 191
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
L+++ RM+ + PN +T L+S CT ++ G S H + G + V +
Sbjct: 192 EWLVDGCLELYSRMRNSTLKPNDLTFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHV 251
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL+ MY KCG+VE A+ +F M K++ SW MI+G A +G AI LF +M + L
Sbjct: 252 ANALISMYCKCGNVEDAYYIFERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFEEMKKQKL 311
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KPD+I+F +LS+C H+GLV +G+ YF+ M + +KP ++H+ C+VD+LGRAGL+EEA
Sbjct: 312 KPDAITFLGVLSSCRHVGLVKQGQFYFNSMVE-HGVKPELDHFACVVDLLGRAGLLEEAR 370
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
I MP PNA+I S L +CR HG V +L + L LEPE A ++ AS+ +
Sbjct: 371 DFIVKMPIHPNAIIWGSLLSSCRLHGSV-WLGIEAAENRLLLEPECAATHLQLASLYASV 429
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
G WD AA + + KGL PGCSW++V +
Sbjct: 430 GCWDQAARVRKLMKGKGLKTEPGCSWIEVRN 460
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 128/256 (50%), Gaps = 8/256 (3%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHN----TCIISRFILTSLSISLHFTRSLFNNL 60
H +L S+++ Q H L ++T N +C+IS + S L +F +
Sbjct: 118 HALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFY---SKCGELCHAYRVFEEM 174
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
PV + ++ +I +A+ ++L+ M + L+P++ T+ ++ C +G G
Sbjct: 175 PVKN-VVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFTCLLSTCTGGGSLGRG 233
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
S H ++G DS ++ N L+ MY C ++ A +FE M +D+VSW+SMIAG
Sbjct: 234 RSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERMDGKDIVSWNSMIAGHAQH 293
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALG 240
A+ +F MK P+++T + ++S+C + V+ G+ + V +G++ ++
Sbjct: 294 GLAVQAIDLFEEMKKQKLKPDAITFLGVLSSCRHVGLVKQGQFYFNSMVEHGVKPELDHF 353
Query: 241 TALVEMYSKCGHVEKA 256
+V++ + G +E+A
Sbjct: 354 ACVVDLLGRAGLLEEA 369
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
++ L +S C S ++++G H A+ G +V +G+ L+ YSKCG + A++VF
Sbjct: 112 DASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVF 171
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS------ 314
M KN+ SWT +I+G A + + L+++M + LKP+ ++F+ +LS C+
Sbjct: 172 EEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFTCLLSTCTGGGSLG 231
Query: 315 -----HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEP 369
H ++ G FD V N ++ M + G +E+AY+I M +
Sbjct: 232 RGRSAHCQTIEMG---FDSYVHVAN---------ALISMYCKCGNVEDAYYIFERMDGK- 278
Query: 370 NAVILRSFLGACRNHG---QVLYLDDNLGKLLLKLEPE 404
+ V S + HG Q + L + + K KL+P+
Sbjct: 279 DIVSWNSMIAGHAQHGLAVQAIDLFEEMKK--QKLKPD 314
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 238/416 (57%), Gaps = 17/416 (4%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L + +F +P + A N +I A +K E+ LFD M + ++ ++ ++
Sbjct: 61 LKCAKRVFMGMP-RRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMIT 115
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEM-PVRDVV 168
C L I + L+F D N ++ Y K++ A+ +F M R+ V
Sbjct: 116 C--YCKLGDINSA--RLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSV 171
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+W++MI+ +V C A+ +F +M+ N P VT+VSL+SAC L + GE IH Y
Sbjct: 172 TWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYI 231
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
L++DV LG AL++MY KCG +E A VF+ + KN+ W +I GL NGRG AI
Sbjct: 232 RTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAI 291
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+ F M + G+KPD ++F ILS CSH GL+ G+ YF EM VY ++P +EHYGCMVD+
Sbjct: 292 AAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDL 351
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG ++EA +IR MP +PN+++L S L AC+ H L + + + LL+L+P G N
Sbjct: 352 LGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDT-KLGEQVTQQLLELDPCDGGN 410
Query: 409 YVLAASVSSLSGNWD---TAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YV +++ + WD T +LM+ ++G++K PGCS ++VN+ E ++ +T+
Sbjct: 411 YVFLSNLYASLSRWDDVNTCRKLMI---KRGVHKTPGCSSIEVNNIVHEFVAGDTS 463
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ + P ++ ++++C +G + H I K+G + D + LL YA +
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 152 IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
+ AK VF MP RDVV+ ++MI+ +A +F M NS + S+++
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMT----ERNSCSWNSMITC 116
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQS 270
L ++ + + V DV A+++ Y K + A ++F LM +N +
Sbjct: 117 YCKLGDINSARLMFDCNPVK----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVT 172
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W MIS G AIS+F +M +KP ++ ++LSAC+HLG +D G+ +
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE-WIHGYI 231
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R +K + ++DM + G +E A + +
Sbjct: 232 RTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 266
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 237/438 (54%), Gaps = 14/438 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H L +K + N + S I L S + +R +F + + + N LI + +
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS-IVPINALIAGFVQN 606
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
+ E+I+LF ++LK GL+P + T+ ++ C L IG VH K G L D +
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLL 666
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
G +L +Y K ++ A + EMP +++ W+++I+G+ +L F RM+ N
Sbjct: 667 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN 726
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ T S++ AC+ + G+ IH +G +AL++MYSKCG V +F
Sbjct: 727 VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSF 786
Query: 258 KVFNLMREK-NLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+ F ++ K ++ W MI G A NG + A+ LF KM + +KPD ++F +L AC+H
Sbjct: 787 EAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHS 846
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ EG+++F M +VY + P ++HY C +D+LGR G ++EA I +P P+ V+ +
Sbjct: 847 GLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWAT 906
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+L ACR H D+ GK+ L++LEP+ + YVL +S+ + +GNW A ++
Sbjct: 907 YLAACRMHK-----DEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESM 961
Query: 433 NQKGLNKVPGCSWVKVND 450
+KG+ K PGCSW+ V +
Sbjct: 962 REKGVAKFPGCSWITVGN 979
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 157/296 (53%), Gaps = 2/296 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H + LD N + S I L + +++F+ L + +N ++ + +
Sbjct: 345 QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQ 403
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
E+I++F M++ L+ D FT+ ++ AC +G VH + K +D ++
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
N L MY+ I AKA+F +P +D +SW+++ G +A+ + RM+L
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+P+ V+ + ++AC+++ G+ IH A+ G+ + A+G++L+++YSK G VE + K
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACS 314
+F + ++ +I+G N + AI LF ++++ GLKP S++FS+ILS CS
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 165/323 (51%), Gaps = 4/323 (1%)
Query: 42 ILTSLSIS--LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRP 99
I+++L+ S L +L +P TP A+N +I +A++ + L+ +M GL P
Sbjct: 265 IISTLASSGRLDHATALLKKMP-TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWP 323
Query: 100 DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVF 159
T+ ++ A G +H+ GLD++ ++G++L+ +YA C AK VF
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383
Query: 160 EEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVR 219
+ +++V W++M+ GFV + P +A+++F M + T VS++ ACT L +
Sbjct: 384 DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFY 443
Query: 220 AGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
G+ +H + N +++ + + A ++MYSK G + A +F+L+ K+ SW + GLA
Sbjct: 444 LGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLA 503
Query: 280 DNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTM 339
N A+ + +M G+ PD +SFS ++ACS++ + GK +A Y I
Sbjct: 504 QNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQ-IHCLAIKYGICSNH 562
Query: 340 EHYGCMVDMLGRAGLIEEAYHII 362
++D+ + G +E + I
Sbjct: 563 AVGSSLIDLYSKHGDVESSRKIF 585
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 143/317 (45%), Gaps = 45/317 (14%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ + P ++++I Y + C E++ LF M K G PD T
Sbjct: 213 RRVFDGI-ACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVT---------- 261
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
L+ T++ A+ +D A A+ ++MP V+W+++
Sbjct: 262 ------------LV-------------TIISTLASSGRLDHATALLKKMPTPSTVAWNAV 296
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I+G + L ++ M+ P T S++SA ++ G+ +H+ AV++GL
Sbjct: 297 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 356
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V +G++L+ +Y+KCG A VF+L EKN+ W M++G N AI +F
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 416
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDML 349
M++ L+ D +F +IL AC++L Y + IK M+ +DM
Sbjct: 417 MMRYTLQTDEFTFVSILGACTYLSSF-----YLGKQVHCVTIKNCMDISLFVANATLDMY 471
Query: 350 GRAGLIEEAYHIIRNMP 366
+ G I +A + +P
Sbjct: 472 SKYGAIGDAKALFSLIP 488
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 38/312 (12%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
A ++L+ +A++ + + F + T G RPD F V+ AC R ++ G VH
Sbjct: 124 AASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCD 183
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ K G S + L+ MYA C ++ A+ VF+ + D + WSSMIA + +A
Sbjct: 184 VVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEA 243
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
L +F RM +P+ VTLV+++S S
Sbjct: 244 LALFSRMDKMGSAPDQVTLVTIISTLAS-------------------------------- 271
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
G ++ A + M + +W +ISG A +G + L+ M GL P +F
Sbjct: 272 ---SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 328
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
+++LSA +++ EG+ A ++ + + ++++ + G +A ++ ++
Sbjct: 329 ASMLSAAANMKAFVEGQQ-MHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLS 386
Query: 367 TEPNAVILRSFL 378
E N V+ + L
Sbjct: 387 CEKNIVMWNAML 398
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
++H + G L LG +LVE+Y K G V A+ E+ + + ++S A +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 282 GRGNYAISLFAKMIQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
G + F + T G +PD + +LSACS +G++ G+ ++ + ++
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-GFSSSVF 194
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
+VDM + G + A + + P+ + S + AC
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSSMI-AC 233
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 240/431 (55%), Gaps = 3/431 (0%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLSISLHF-TRSLFNNLPVTPPLFAYNTLIRAYA 77
L +LH ++ ++ + + F+ + +F ++ T + ++N LI A
Sbjct: 255 LKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSME-TKTVNSWNALIGGCA 313
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
+ +++ L+ +M +GL PD FT ++ A + G VH + + GL+ D +
Sbjct: 314 QNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSF 373
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
IG +LL +Y C E A+ +F+ M + VSW++MI+G+ P DAL +F ++
Sbjct: 374 IGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDG 433
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
P+ + +VS++ AC+ +R G+ H YA+ L DV + + ++MY+K G ++++
Sbjct: 434 FQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESR 493
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
VF+ ++ K+L SW +I+ +G G +I LF +M + G PD +F IL+ CSH G
Sbjct: 494 SVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAG 553
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
LV+EG YF+EM + I+P +EHY C++DMLGRAG +++A ++ MP +P++ + S
Sbjct: 554 LVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSL 613
Query: 378 LGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGL 437
L CRN G+ L + + + LL+LEP+ NYV +++ + SG WD + I GL
Sbjct: 614 LSFCRNFGE-LEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGL 672
Query: 438 NKVPGCSWVKV 448
K GCSW+++
Sbjct: 673 QKDAGCSWIEL 683
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 174/360 (48%), Gaps = 38/360 (10%)
Query: 84 ESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTL 142
++I +F +++ T DNFT+P V+KAC L G+G +H ++ K+GL D ++GN L
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 143 LRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES--P 200
+ MY +D A VF MPVR++VSW+S+I+GF D + M E P
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
+ TLV+++ C ++V+ G IH AV GL DV + +LV+MYSKCG++ +A +F
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSISFSAILSACSHLGLV 319
+ KN SW MI GL G A +LF +M +Q ++ + ++ IL AC + +
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL 252
Query: 320 DEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEP----NA 371
K Y+I+ ++ V + G++ A + +M T+ NA
Sbjct: 253 RSLKELHG-----YSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 372 VILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
+I G C +G +P N + + S L +W T L++A
Sbjct: 308 LI-----GGCAQNG----------------DPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGR 113
+F+ +PV L ++N++I +++ S + + EM+ + GL PD T V+ C R
Sbjct: 88 VFHYMPVRN-LVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAR 146
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + +G +H L K+GL D + N+L+ MY+ C + A+ +F++ ++ VSW++M
Sbjct: 147 EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206
Query: 174 IAGFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
I G +A +F M++ + N VT+++++ AC + +R+ + +H Y++ +G
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ D + V Y+KCG + A +VF M K + SW +I G A NG A++L+
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+M +GL PD + ++L A +HL + GK
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 231/418 (55%), Gaps = 9/418 (2%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIE-----SIKLFDEMLKTGLRPDNFT 103
S+ + S+F L P F YNTL+R Y +++LF +M+ G+ PD++T
Sbjct: 82 SMAYAASIFAALD-DPEAFDYNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYT 140
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
+PFV KAC + + G + + K+G D++ N+L+ Y C E D+A+ FE+M
Sbjct: 141 FPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQME 200
Query: 164 --VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
+ SWS+++A + ++ ++ F M A P+ ++VS +SAC L G
Sbjct: 201 DDEQTTASWSALLAAYTRAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVG 260
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
SIH + N L+ + T+LV+MY+KCG +E A VF+ M +KN +++ M+SGLA +
Sbjct: 261 RSIHCALLRNTARLNTFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALH 320
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G G A+ +F M++ G +PD+ + +L+ACS GL++EG FD M + + P +H
Sbjct: 321 GDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQH 380
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCMVD++ RAG +++A +I NMPT P RS L ACR HG L L + + L +L
Sbjct: 381 YGCMVDLMARAGRLDDARALIGNMPTGPTDTAWRSLLNACRIHGN-LELAERALQELERL 439
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKE 459
+Y++ + + + + N D AA +GL + PG S V+V+ + +S++
Sbjct: 440 GATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQD 497
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 205/339 (60%), Gaps = 10/339 (2%)
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ +G ++HS++ + G S Y+ N+LL +YA C ++ A VF++MP +D+V+W+S+I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
F P +AL ++ M P+ T+VSL+SAC + + G+ +H Y + GL +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ L+++Y++CG VE+A +F+ M +KN SWT +I GLA NG G AI LF M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 297 T-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
T GL P I+F IL ACSH G+V EG YF M Y I+P +EH+GCMVD+L RAG +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
++AY I++MP +PN VI R+ LGAC HG D +L + +L+LEP +YVL
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG-----DSDLAEFARIQILQLEPNHSGDYVL 298
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+++ + W ++ + + G+ KVPG S V+V +
Sbjct: 299 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 337
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ +P L A+N++I +A+ E++ L+ EM G++PD FT ++ AC +
Sbjct: 45 VFDKMP-EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 103
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G VH + KVGL + + N LL +YA C ++ AK +F+EM ++ VSW+S+I
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 176 GFVACDSPSDALKVFHRMKLANES--PNSVTLVSLVSACTSLINVRAG-ESIHSYAVVNG 232
G +A+++F M+ + E P +T V ++ AC+ V+ G E
Sbjct: 164 GLAVNGFGKEAIELFKYME-STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 222
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLF 291
+E + +V++ ++ G V+KA++ M + N+ W ++ +G + ++ F
Sbjct: 223 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEF 280
Query: 292 AKMIQTGLKPDSISFSAILS 311
A++ L+P+ +LS
Sbjct: 281 ARIQILQLEPNHSGDYVLLS 300
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
+ +VR GE+IHS + +G + + +L+ +Y+ CG V A+KVF+ M EK+L +W +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
I+G A+NG+ A++L+ +M G+KPD + ++LSAC+ +G + GK M +V
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
+ + ++D+ R G +EEA + M + N+V S +
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 239/441 (54%), Gaps = 14/441 (3%)
Query: 27 LKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLI---RAYAKTSCSI 83
+K LDH +C++ L L L + + P + +L+ R + S I
Sbjct: 246 IKPGLDHYSCMVDLLGRAGL---LEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGI 302
Query: 84 ESI--KLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNT 141
++ +L E K D + +C + G +H L+ KVG DS +IG++
Sbjct: 303 QAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSS 362
Query: 142 LLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
L+ +Y+ C +++ + VF+ MP ++ VSW++MI+GF + L +F M+L++ PN
Sbjct: 363 LITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPN 422
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T +L S CT+ + G+S+H+ + G V + AL+ MY+KCG +++A +F
Sbjct: 423 DITFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFG 482
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
+ K+L SW MI G + G + + L +M + + PD++SF +LS+C H LV+E
Sbjct: 483 FIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEE 542
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++ F M + IKP ++HY CMVD+LGRAGL+EEA+ +I+ M PNAVI S LG+C
Sbjct: 543 GRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSC 601
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R HG + + + LKLEP A ++ A++ + G W A + +A+ +GL
Sbjct: 602 RVHGNI-SIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNI 660
Query: 442 GCSWVKVNDG----SAEEMSK 458
GCSW++V D +AE SK
Sbjct: 661 GCSWIEVGDKVYSFTAENRSK 681
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 180/302 (59%), Gaps = 6/302 (1%)
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H L+ KVG DS +IG++L+ +Y+ C +++ + VF+ MP ++ VSW++MI+GF
Sbjct: 32 GTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFAL 91
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+ L +F M L++ PN +T +L S CT + G S+H+ + G V +
Sbjct: 92 HNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHV 151
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL+ MY+KCG +E+A +F + K+L SW +I G + + + L +M + +
Sbjct: 152 SNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHI 211
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
PD++SF +LS+C H LV+EG++ F M + IKP ++HY CMVD+LGRAGL+EEA+
Sbjct: 212 VPDALSFLGVLSSCRHARLVEEGRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAGLLEEAW 270
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGA----NYVLAASV 415
+I+ M PNAVI S LG+CR HG + + + LKLEP G +LAA++
Sbjct: 271 DLIQTMSIPPNAVIWGSLLGSCRVHGNI-SIGIQAAEHRLKLEPGKGETSTDQSILAAAM 329
Query: 416 SS 417
SS
Sbjct: 330 SS 331
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 163/357 (45%), Gaps = 13/357 (3%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
QLH L +K D I S I L S L + +F +P T ++ +I +A
Sbjct: 34 QLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP-TKNTVSWTAMISGFALH 92
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ + LF M+ + +P++ T+ + C + L+ +G SVH+L ++G S ++
Sbjct: 93 NRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVS 152
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
N LL MYA C I+ A+ +F + +D+VSW+++I G L + M+ +
Sbjct: 153 NALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIV 212
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P++++ + ++S+C V G + +G++ + + +V++ + G +E+A+ +
Sbjct: 213 PDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDL 272
Query: 260 FNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP-------DSISFSAILS 311
M N W ++ GN +I + A + L+P D +A +S
Sbjct: 273 IQTMSIPPNAVIWGSLLGSC--RVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMS 330
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+C+ + +G + +V T+ ++ + R +E +Y + + MPT+
Sbjct: 331 SCADRQMFTQGTQLHGLLVKV-GCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTK 386
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
S + L + +S+C G +H V G + V +G++L+ +YS+C +E ++
Sbjct: 10 STDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYL 69
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M KN SWT MISG A + R + LFA M+ + KP+ I+F+ + S C+ L
Sbjct: 70 VFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHAL 129
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ G++ R+ + ++ M + G IEEA I
Sbjct: 130 LALGRSVHALQMRM-GFHSYVHVSNALLSMYAKCGCIEEAQFIF 172
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 209/340 (61%), Gaps = 14/340 (4%)
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ GL D Y+ N +LR + + + +F ++ ++ W++MI G V+ D DA++
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---------GLELDVAL 239
+ M+ PN+ T ++ AC L++++ G IH+ V G+ +V +
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFV 158
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-- 297
GT+LV+MY+KCG++EKA VF+ M EK++ SW MI G A NG AI LF +M +
Sbjct: 159 GTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENK 218
Query: 298 -GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
G+KPD +F +L C+H GLVDEG+ YF+ M R +++ P++EHYGCMVD+LGRAGL++
Sbjct: 219 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 278
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA+ +IRNMP E NA++ + LGACR H + L K L++LEP NYVL +++
Sbjct: 279 EAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELAL-KQLIELEPWNSGNYVLLSNIY 337
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
S + WD AA++ +++N+K + K PGCSW++V DG E
Sbjct: 338 SANLKWDEAAKVRLSMNEKRIQKPPGCSWIEV-DGIVHEF 376
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 138/265 (52%), Gaps = 16/265 (6%)
Query: 28 KTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESI 86
+ L H+ +++ + S S ++TR LF+ + P +F +NT+IR C ++I
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIK-QPNIFLWNTMIRGLVSNDCFDDAI 97
Query: 87 KLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK---------VGLDSDKY 137
+ + M G P+NFT+PFV+KAC R L + +G +H+L+ K +G+ + +
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVF 157
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+G +L+ MYA C ++ A++VF+ MP +D+VSW +MI G+ P +A+ +F +M+ N
Sbjct: 158 VGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQREN 217
Query: 198 E---SPNSVTLVSLVSACTSLINVRAGES-IHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ P+ T + L+ CT V G +S L + +V++ + G +
Sbjct: 218 KLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLL 277
Query: 254 EKAFKVF-NLMREKNLQSWTIMISG 277
++A ++ N+ E N W ++
Sbjct: 278 DEAHQLIRNMPMEANAIVWGALLGA 302
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 35/418 (8%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N + Y + + E++ +F+ M+ +G+RPD + + +C + I G S H + +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 130 VGLDSDKYIGNTLLRMYAACK-------------------------------EIDVAKAV 158
G +S I N L+ MY C E+D A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS--VTLVSLVSACTSLI 216
FE MP +++VSW+++I+G V +A++VF M+ + E N+ VT++S+ SAC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ-SQEGVNADGVTMMSIASACGHLG 484
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
+ + I+ Y NG++LDV LGT LV+M+S+CG E A +FN + +++ +WT I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
+A G AI LF MI+ GLKPD ++F L+ACSH GLV +GK F M +++ +
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P HYGCMVD+LGRAGL+EEA +I +MP EPN VI S L ACR G V K
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ + L PE +YVL ++V + +G W+ A++ +++ +KGL K PG S +++ + E
Sbjct: 665 IQV-LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 15/383 (3%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI----SLHFTRSLFNNLPVTPPLFAY 69
KT+ L H K LD++ I++ + S + SL F + +F N F Y
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMY 102
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N+LIR YA + E+I LF M+ +G+ PD +T+PF + AC + G G +H LI K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
+G D ++ N+L+ YA C E+D A+ VF+EM R+VVSW+SMI G+ D DA+ +
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 190 FHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F RM E +PNSVT+V ++SAC L ++ GE ++++ +G+E++ + +ALV+MY
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC ++ A ++F+ NL M S G A+ +F M+ +G++PD IS +
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY----GCMVDMLGRAGLIEEAYHIIRN 364
+S+CS L + GK+ Y ++ E + ++DM + + A+ I
Sbjct: 343 AISSCSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 365 MPTEPNAVILRSFLGACRNHGQV 387
M + V S + +G+V
Sbjct: 398 M-SNKTVVTWNSIVAGYVENGEV 419
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 180/389 (46%), Gaps = 44/389 (11%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAY 69
IQ+ + + LF++ SL H + L R +F+ + + ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVH---------FYAECGELDSARKVFDEMS-ERNVVSW 203
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLK-TGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
++I YA+ + +++ LF M++ + P++ T V+ AC + + G V++ I
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G++ + + + L+ MY C IDVAK +F+E ++ ++M + +V +AL
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
VF+ M + P+ ++++S +S+C+ L N+ G+S H Y + NG E + AL++MY
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 249 KC-------------------------------GHVEKAFKVFNLMREKNLQSWTIMISG 277
KC G V+ A++ F M EKN+ SW +ISG
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 278 LADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
L AI +F M Q G+ D ++ +I SAC HLG +D K + + + I+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQ 502
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ +VDM R G E A I ++
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCL 115
F +P + ++NT+I + S E+I++F M + G+ D T + ACG
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ + ++ I K G+ D +G TL+ M++ C + + A ++F + RDV +W++ I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESI-HSYAVVNGLE 234
+ A+++F M P+ V V ++AC+ V+ G+ I +S ++G+
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V++ + G +E+A ++ M E N W +++ A +GN ++ +A
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA--ACRVQGNVEMAAYAA 662
Query: 294 MIQTGLKPDSISFSAILS 311
L P+ +LS
Sbjct: 663 EKIQVLAPERTGSYVLLS 680
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 255/485 (52%), Gaps = 51/485 (10%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLP- 61
S H+ L QL + L HT F L RF +LS +L + R +F+++P
Sbjct: 16 SNHLNHLKQLQAYLTTLGHAHTHFYAFKL-------IRFCTLTLS-NLTYARLIFDHIPS 67
Query: 62 VTPPLFAYNTLIRAYAKTSCSIES-IKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGI 119
+ LF +I AYA + S + LF ML++ RP++F +P +K C
Sbjct: 68 LNTHLFT--AMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPESC---A 122
Query: 120 GGSVHSLIFKVGLDS---------DKY------IGNT-----------------LLRMYA 147
S+H+ I K G D Y +GN ++ +A
Sbjct: 123 AESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFA 182
Query: 148 ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVS 207
+++ A VF EM RDV SW+++IAG + + +++F RM PN VT+V
Sbjct: 183 RVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVC 242
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
+SAC + ++ G IH Y NGL D + ALV+MY KCG + KA KVF + EK
Sbjct: 243 ALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKG 302
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQ--TGLKPDSISFSAILSACSHLGLVDEGKNY 325
L SW MI+ A +G+ + AI++F +M++ G++PD ++F +L+AC+H GLV++G Y
Sbjct: 303 LTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWY 362
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
F+ M + Y I+P +EHYGC++D+LGRAG +EA +++ M EP+ V+ S L C+ HG
Sbjct: 363 FEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHG 422
Query: 386 QVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSW 445
+ L + K L++++P G ++ A+V G WD + + Q+ KVPGCSW
Sbjct: 423 RT-DLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSW 481
Query: 446 VKVND 450
++V+D
Sbjct: 482 IEVDD 486
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 231/412 (56%), Gaps = 21/412 (5%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
N+P+ + + +I Y++ CS E++ +F +M+ +G P+ T V+ AC
Sbjct: 323 NIPLD--MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFS 380
Query: 119 IGGSVHSLIFK----------VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RD 166
G +H+ K G D D + N L+ MY+ C+ A+++F+++P+ R+
Sbjct: 381 QGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 440
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESI 224
VV+W+ MI G +DALK+F M + +PN+ T+ ++ AC L +R G+ I
Sbjct: 441 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500
Query: 225 HSYAVVNGLELDVA---LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
H+Y V+ + D + + L+ MYSKCG V+ A VF+ M +K+ SWT M++G +
Sbjct: 501 HAY-VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 559
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GRG+ A+ +F KM + G PD I+F +L ACSH G+VD+G +YFD M+ Y + P EH
Sbjct: 560 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 619
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y +D+L R G +++A+ +++MP EP AV+ + L ACR H V + L K L+++
Sbjct: 620 YAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK-LVEM 678
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
E +Y L +++ + +G W A + + + G+ K PGCSWV+ G+A
Sbjct: 679 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTA 730
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 10/278 (3%)
Query: 62 VTP-PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
VTP P +N LIR + K +I + ML+ G R D+FT P V+KACG G
Sbjct: 77 VTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCG 136
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR---DVVSWSSMIAGF 177
+ H LI G +S+ +I N L+ MY+ C ++ A +F+E+ R DV+SW+S+++
Sbjct: 137 SAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAH 196
Query: 178 VACDSPSDALKVFHRMKL------ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN 231
V + AL +F +M L NE + +++V+++ AC SL V + +H A+ N
Sbjct: 197 VKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN 256
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G LDV +G AL++ Y+KCG +E A KVFN+M K++ SW M++G + +G A LF
Sbjct: 257 GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELF 316
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
M + + D ++++A+++ S G E N F +M
Sbjct: 317 KNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 10/241 (4%)
Query: 134 SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM 193
S + +G ++ Y AC D A V E + V W+ +I + A+ V RM
Sbjct: 49 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 108
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
A + TL ++ AC L + R G + H NG E +V + ALV MYS+CG +
Sbjct: 109 LRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 168
Query: 254 EKAFKVFNLMREKNLQ---SWTIMISGLADNGRGNYAISLFAKMI------QTGLKPDSI 304
E+A +F+ + ++ + SW ++S + A+ LF+KM T + D I
Sbjct: 169 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 228
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
S IL AC L V + K R ++D + GL+E A +
Sbjct: 229 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG-NALIDAYAKCGLMENAVKVFNM 287
Query: 365 M 365
M
Sbjct: 288 M 288
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 249/458 (54%), Gaps = 25/458 (5%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTL 72
K++ ++H++ ++ + + S+ + ++ L R +F+ + +F +N L
Sbjct: 115 KSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV-ANEKVFLWNLL 173
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG---IGGSVHSLIFK 129
+ YAK ES+ LF M + G+R + R ++ I G V + + +
Sbjct: 174 MNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSE 233
Query: 130 VGLD-------------------SDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSW 170
GLD + + N LL MY+ ++ A VFE M R VVSW
Sbjct: 234 KGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 293
Query: 171 SSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVV 230
+SMIAG+ ++++FH M+ + PNS+T+ ++ AC SL + G+ IH + +
Sbjct: 294 TSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILR 353
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISL 290
NG LD + ALV+MY KCG + A +F+++ EK+L SWT+MI+G +G G+ AI+
Sbjct: 354 NGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAA 413
Query: 291 FAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLG 350
F +M +G++PD +SF +IL ACSH GL+DEG +F+ M I+P EHY C+VD+L
Sbjct: 414 FNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLA 473
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
RAG + +AY I+ MP EP+A I + L CR + V L + + + + +LEPE YV
Sbjct: 474 RAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDV-KLAEKVAEHVFELEPENTGYYV 532
Query: 411 LAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
L A++ + + W+ +L I ++GL K PGCSW+++
Sbjct: 533 LLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEI 570
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 167/372 (44%), Gaps = 60/372 (16%)
Query: 81 CSIESIKLFDEMLKTGLRPDN--FTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
C + +++ E++ +PD TY V++ C I G +HS+I ++ D +
Sbjct: 79 CELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVL 138
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM----- 193
G+ L+ MY C ++ + +F+++ V W+ ++ G+ + ++L +F RM
Sbjct: 139 GSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
Query: 194 -------KLANE--SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA------ 238
KL +E + ++ S++S S G + ++ G+ D+A
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVE 258
Query: 239 --LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
L L++MYSK G++ A +VF M E+++ SWT MI+G A G + ++ LF +M +
Sbjct: 259 LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 318
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR------------------------- 331
L P+SI+ + IL AC+ L ++ G+ + R
Sbjct: 319 EDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGL 378
Query: 332 ---VYNIKPTME--HYGCMVDMLGRAGLIEE---AYHIIRNMPTEPNAVILRSFLGACRN 383
++++ P + + M+ G G E A++ +RN EP+ V S L AC +
Sbjct: 379 ARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 438
Query: 384 HGQVLYLDDNLG 395
G LD+ G
Sbjct: 439 SG---LLDEGWG 447
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 223/393 (56%), Gaps = 3/393 (0%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
+LFN +P + +N +I YA+ ++++F ++ + L P++ T ++ A
Sbjct: 145 TLFNRMPCKD-VVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALL 203
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSM 173
+ G +H I K G +S+ ++ L+ MYA C + A+ +F R D VSW+ M
Sbjct: 204 NDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVM 263
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG++ DA F +MKL N PN VT+V+++ A L +RAG ++H+Y + G
Sbjct: 264 IAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGF 323
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +G L++MY+KCG ++ + K+F+ M+ K+ SW +M++G A +GRG+ AI LF++
Sbjct: 324 QSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSR 383
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + ++ DS SF +LSAC H GL+ EG+ FD M++ + ++P +EHY CM D+LGRAG
Sbjct: 384 MQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAG 443
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L E +I++MP EP+A + + LGA H V + L L KLE + +Y +
Sbjct: 444 LFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHH-LDKLEHKNLTHYAALS 502
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ + SG W I + GL K PG SWV
Sbjct: 503 NTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L A++ +I A+ ++ E++ LF M GL+ + + AC + +G S+H
Sbjct: 54 LVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHC 113
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K +D D +G L+ MYA C +A +F MP +DVV+W++MI G+ P
Sbjct: 114 CAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFP 173
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL++FH+++L+ +PNS T+V L+ A L ++ G IH + G E + + TAL++
Sbjct: 174 ALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALID 233
Query: 246 MYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
MY+KCG + A +F+ K+ SW +MI+G +G A S F +M ++P+ +
Sbjct: 234 MYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIV 293
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI---EEAYHI 361
+ +L A +HL + G + R+ + C++DM + G + E+ +H
Sbjct: 294 TIVTVLPAVAHLSALRAGMTLHAYVIRM-GFQSKTPVGNCLIDMYAKCGWLDHSEKIFHE 352
Query: 362 IRNMPTEPNAVILRSF 377
++N T V+L +
Sbjct: 353 MKNKDTVSWNVMLAGY 368
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 123/206 (59%)
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+G G +H + G+DSD + ++ MYA C E+D AK +F+E+ RD+V+WS++IA
Sbjct: 4 LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
FV P +AL +F M+ N V L+S + AC + +++ G+S+H AV ++LD
Sbjct: 64 FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+++GTALV MY+KCG A +FN M K++ +W MI+G A G A+ +F K+
Sbjct: 124 ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQL 183
Query: 297 TGLKPDSISFSAILSACSHLGLVDEG 322
+ L P+S + +L A + L +D+G
Sbjct: 184 SELNPNSGTMVGLLPAFALLNDLDQG 209
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 27 LKTSLDHNTCIISRFILTSLSISLHFTRSLFN------NLPVTPPLF----------AYN 70
L LD +CI + I H +L + +L LF ++N
Sbjct: 202 LLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWN 261
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+I Y + +I++ F +M ++P+ T V+ A + G ++H+ + ++
Sbjct: 262 VMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRM 321
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G S +GN L+ MYA C +D ++ +F EM +D VSW+ M+AG+ S A+++F
Sbjct: 322 GFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELF 381
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESI-HSYAVVNGLELDVALGTALVEMYSK 249
RM+ + +S + ++++SAC + G I S + + LE D+ + ++ +
Sbjct: 382 SRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGR 441
Query: 250 CG 251
G
Sbjct: 442 AG 443
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 221 GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLAD 280
G IH +A G++ DVA+ T ++ MY++CG V+ A ++F ++ ++L +W+ +I+
Sbjct: 7 GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQ 66
Query: 281 NGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
+G A+SLF M GL+ + + + L AC+ + + GK+ + N+ +
Sbjct: 67 SGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKA-NVDLDIS 125
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+V M + G A + MP +
Sbjct: 126 VGTALVSMYAKCGFFALALTLFNRMPCK 153
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 231/412 (56%), Gaps = 21/412 (5%)
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
N+P+ + + +I Y++ CS E++ +F +M+ +G P+ T V+ AC
Sbjct: 216 NIPLD--MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFS 273
Query: 119 IGGSVHSLIFK----------VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV--RD 166
G +H+ K G D D + N L+ MY+ C+ A+++F+++P+ R+
Sbjct: 274 QGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 333
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRM--KLANESPNSVTLVSLVSACTSLINVRAGESI 224
VV+W+ MI G +DALK+F M + +PN+ T+ ++ AC L +R G+ I
Sbjct: 334 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 393
Query: 225 HSYAVVNGLELDVA---LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
H+Y V+ + D + + L+ MYSKCG V+ A VF+ M +K+ SWT M++G +
Sbjct: 394 HAY-VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 452
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
GRG+ A+ +F KM + G PD I+F +L ACSH G+VD+G +YFD M+ Y + P EH
Sbjct: 453 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 512
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y +D+L R G +++A+ +++MP EP AV+ + L ACR H V + L K L+++
Sbjct: 513 YAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK-LVEM 571
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSA 453
E +Y L +++ + +G W A + + + G+ K PGCSWV+ G+A
Sbjct: 572 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTA 623
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 141/247 (57%), Gaps = 9/247 (3%)
Query: 92 MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE 151
ML+ G R D+FT P V+KACG G + H LI G +S+ +I N L+ MY+ C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 152 IDVAKAVFEEMPVR---DVVSWSSMIAGFVACDSPSDALKVFHRMKL------ANESPNS 202
++ A +F+E+ R DV+SW+S+++ V + AL +F +M L NE +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 203 VTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL 262
+++V+++ AC SL V + +H A+ NG LDV +G AL++ Y+KCG +E A KVFN+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M K++ SW M++G + +G A LF M + + D ++++A+++ S G E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 323 KNYFDEM 329
N F +M
Sbjct: 241 LNVFRQM 247
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 250/450 (55%), Gaps = 7/450 (1%)
Query: 6 IETLIQ---LSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLP 61
+ TLIQ K++ L +H + ++ +D + + +I T L + +F +
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 62 V-TPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
+ ++N++ +AY+ + ++ L+ ML+ +PD T+ + +C + G
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
+HS +G D D NT + MY+ ++ A+ +F+ M R VSW+ MI+G+
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VAL 239
+AL +FH M + E P+ VTL+SL+S C ++ G+ I + A + G + D V +
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMI 395
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
AL++MYSKCG + +A +F+ EK + +WT MI+G A NG A+ LF+KMI
Sbjct: 396 CNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KP+ I+F A+L AC+H G +++G YF M +VYNI P ++HY CMVD+LGR G +EEA
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 515
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
+IRNM +P+A I + L AC+ H V + + + L LEP++ A YV A++ + +
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRNV-KIAEQAAESLFNLEPQMAAPYVEMANIYAAA 574
Query: 420 GNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
G WD A + + Q+ + K PG S ++VN
Sbjct: 575 GMWDGFARIRSIMKQRNIKKYPGESVIQVN 604
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 137/258 (53%), Gaps = 2/258 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
A+N IR + +ES+ LF EM + G P+NFT+PFV KAC R +G VH+ +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
K SD ++G + M+ C +D A VFE MP RD +W++M++GF A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
+F M+L +P+SVT+++L+ + + +++ E++H+ + G+++ V + + Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 248 SKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
KCG ++ A VF + ++ + SW M + G A L+ M++ KPD +
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 306 FSAILSACSHLGLVDEGK 323
F + ++C + + +G+
Sbjct: 259 FINLAASCQNPETLTQGR 276
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%)
Query: 167 VVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHS 226
V +W+ I V + P ++L +F MK PN+ T + AC L +V E +H+
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 227 YAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNY 286
+ + + DV +GTA V+M+ KC V+ A KVF M E++ +W M+SG +G +
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 287 AISLFAKMIQTGLKPDSISFSAILSACS 314
A SLF +M + PDS++ ++ + S
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSAS 164
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,910,497,851
Number of Sequences: 23463169
Number of extensions: 275867172
Number of successful extensions: 859372
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9127
Number of HSP's successfully gapped in prelim test: 2619
Number of HSP's that attempted gapping in prelim test: 705800
Number of HSP's gapped (non-prelim): 56198
length of query: 462
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 316
effective length of database: 8,933,572,693
effective search space: 2823008970988
effective search space used: 2823008970988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)