BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012504
(462 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 277/481 (57%), Gaps = 38/481 (7%)
Query: 10 IQLSKTVHHLHQLHTLFLKTSLDHNTCIISRF----ILTSLSISLHFTRSLFNNLPVTPP 65
+Q L Q+H LKT L ++ I++F I ++ S L + + +F+ P
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD-RPD 79
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +N +IR ++ + S+ L+ ML + + +T+P ++KAC +H+
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM------------ 173
I K+G ++D Y N+L+ YA +A +F+ +P D VSW+S+
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 174 -------------------IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTS 214
I+G+V D +AL++FH M+ ++ P++V+L + +SAC
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 215 LINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM 274
L + G+ IHSY + +D LG L++MY+KCG +E+A +VF +++K++Q+WT +
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 275 ISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYN 334
ISG A +G G AIS F +M + G+KP+ I+F+A+L+ACS+ GLV+EGK F M R YN
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 335 IKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNL 394
+KPT+EHYGC+VD+LGRAGL++EA I+ MP +PNAVI + L ACR H + L + +
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI-ELGEEI 438
Query: 395 GKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
G++L+ ++P G YV A++ ++ WD AAE + ++G+ KVPGCS + + +G+
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL-EGTTH 497
Query: 455 E 455
E
Sbjct: 498 E 498
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 307 bits (787), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 274/499 (54%), Gaps = 56/499 (11%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCI---ISRFILTS--LSISLHFTRSLFNNLPVTPPLFA 68
+T+ L Q+H +F+K+ +T I RF TS L + +FN +P F+
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP-QRNCFS 92
Query: 69 YNTLIRAYAKTS--CSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+NT+IR ++++ ++ +I LF EM+ + P+ FT+P V+KAC + I G +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACK----------------------------------- 150
L K G D+++ + L+RMY C
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 151 ----------EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+ A+ +F++M R VVSW++MI+G+ DA++VF MK + P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVF 260
N VTLVS++ A + L ++ GE +H YA +G+ +D LG+AL++MYSKCG +EKA VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 261 NLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVD 320
+ +N+ +W+ MI+G A +G+ AI F KM Q G++P +++ +L+ACSH GLV+
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 321 EGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
EG+ YF +M V ++P +EHYGCMVD+LGR+GL++EA I NMP +P+ VI ++ LGA
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 381 CRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKV 440
CR G V + + +L+ + P YV +++ + GNW +E+ + + +K + K
Sbjct: 453 CRMQGNV-EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
Query: 441 PGCSWVKVNDGSAEEMSKE 459
PGCS + + DG E E
Sbjct: 512 PGCSLIDI-DGVLHEFVVE 529
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 267/450 (59%), Gaps = 15/450 (3%)
Query: 3 SRHIETLI--QLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLF 57
SR + LI +L ++ HL Q+H +SL +++ IIS + ++SLS++ L F R+L
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 58 NNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLI 117
+ + P +N L R Y+ + +ESI ++ EM + G++P+ T+PF++KAC L +
Sbjct: 71 LHSSDSTPS-TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G + + K G D D Y+GN L+ +Y CK+ A+ VF+EM R+VVSW+S++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDV 237
V + + F M P+ T+V L+SAC N+ G+ +HS +V LEL+
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNC 247
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-Q 296
LGTALV+MY+K G +E A VF M +KN+ +W+ MI GLA G A+ LF+KM+ +
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
+ ++P+ ++F +L ACSH GLVD+G YF EM +++ IKP M HYG MVD+LGRAG +
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG----KLLLKLEPELGANYVLA 412
EAY I+ MP EP+AV+ R+ L AC H D+ +G K L++LEP+ N V+
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHD--EDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 413 ASVSSLSGNWDTAAELMVAINQKGLNKVPG 442
A+ + + W AAE+ + + + K+ G
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKIAG 455
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 305 bits (782), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 263/461 (57%), Gaps = 21/461 (4%)
Query: 6 IETLIQLSKT-----VHHLHQLHTLFLKTSLDHNTCIISR---FILTSLS--ISLHFTRS 55
+E I L +T + L Q+H ++ + + + + F L SL + +
Sbjct: 15 VEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHK 74
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRC 114
+F+ + +F +NTLIR YA+ SI + L+ EM +GL PD TYPF++KA
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ +G ++HS++ + G S Y+ N+LL +YA C ++ A VF++MP +D+V+W+S+I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
GF P +AL ++ M P+ T+VSL+SAC + + G+ +H Y + GL
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
++ L+++Y++CG VE+A +F+ M +KN SWT +I GLA NG G AI LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 295 IQT-GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
T GL P I+F IL ACSH G+V EG YF M Y I+P +EH+GCMVD+L RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANY 409
+++AY I++MP +PN VI R+ LGAC HG D +L + +L+LEP +Y
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG-----DSDLAEFARIQILQLEPNHSGDY 429
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + W ++ + + G+ KVPG S V+V +
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 301 bits (770), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 249/398 (62%), Gaps = 4/398 (1%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF+ +PV + ++N +I YA+T E+++LF +M+KT +RPD T VV AC +
Sbjct: 220 QKLFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
I +G VH I G S+ I N L+ +Y+ C E++ A +FE +P +DV+SW+++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY--AVVN 231
I G+ + +AL +F M + E+PN VT++S++ AC L + G IH Y +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 232 GLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLF 291
G+ +L T+L++MY+KCG +E A +VFN + K+L SW MI G A +GR + + LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 292 AKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGR 351
++M + G++PD I+F +LSACSH G++D G++ F M + Y + P +EHYGCM+D+LG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 352 AGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVL 411
+GL +EA +I M EP+ VI S L AC+ HG V L ++ + L+K+EPE +YVL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV-ELGESFAENLIKIEPENPGSYVL 577
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+++ + +G W+ A+ +N KG+ KVPGCS ++++
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 203/396 (51%), Gaps = 41/396 (10%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI----LTSLSISLHFTRSLFNNLPVT 63
+L+ KT+ L +H +K L + +S+ I L+ L + S+F +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ-E 96
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P L +NT+ R +A +S + ++KL+ M+ GL P+++T+PFV+K+C + G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 124 HSLIFKVGLDSDKYIGNTLLRMY-------------------------------AACKEI 152
H + K+G D D Y+ +L+ MY A+ I
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 153 DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSAC 212
+ A+ +F+E+PV+DVVSW++MI+G+ + +AL++F M N P+ T+V++VSAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 213 TSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
++ G +H + +G ++ + AL+++YSKCG +E A +F + K++ SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN---YFDEM 329
+I G A+ LF +M+++G P+ ++ +IL AC+HLG +D G+ Y D+
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK- 395
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
R+ + ++DM + G IE A+ + ++
Sbjct: 396 -RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 267/459 (58%), Gaps = 8/459 (1%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL-----TSLSISLHFTRSLFNNLPVT 63
L++ + Q+H F+K SL +++ + +L + S+++ S+F +
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID-D 94
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
P F +NT+IR Y E++ ++EM++ G PDNFTYP ++KAC R I G +
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H +FK+GL++D ++ N+L+ MY C E++++ AVFE++ + SWSSM++
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 184 SDALKVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
S+ L +F M N +VS + AC + + G SIH + + N EL++ + T+
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 243 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPD 302
LV+MY KCG ++KA +F M ++N +++ MISGLA +G G A+ +F+KMI+ GL+PD
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 303 SISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHII 362
+ + ++L+ACSH GLV EG+ F EM + ++PT EHYGC+VD+LGRAGL+EEA I
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 363 RNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNW 422
+++P E N VI R+FL CR Q + L + LLKL +Y+L +++ S W
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVR-QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMW 453
Query: 423 DTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
D A I KGL + PG S V++ + +S++ +
Sbjct: 454 DDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 247/436 (56%), Gaps = 9/436 (2%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
++H L D + + ++ I + S S+ + R +F+ ++ +N L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR-KRTIYVWNALFRALTLA 156
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--GRCLL--IGIGGSVHSLIFKVGLDSD 135
E + L+ +M + G+ D FTY +V+KAC C + + G +H+ + + G S
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRM-- 193
YI TL+ MYA +D A VF MPVR+VVSWS+MIA + +AL+ F M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+ + SPNSVT+VS++ AC SL + G+ IH Y + GL+ + + +ALV MY +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
E +VF+ M ++++ SW +IS +G G AI +F +M+ G P ++F ++L AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH GLV+EGK F+ M R + IKP +EHY CMVD+LGRA ++EA ++++M TEP +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 374 LRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAIN 433
S LG+CR HG V L + + L LEP+ NYVL A + + + WD + +
Sbjct: 457 WGSLLGSCRIHGNV-ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 434 QKGLNKVPGCSWVKVN 449
+GL K+PG W++V
Sbjct: 516 HRGLQKLPGRCWMEVR 531
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
N LI++ K ++I++ + P TY ++ CG + VH I
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G D D ++ L+ MY+ +D A+ VF++ R + W+++ + L +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 190 FHRMKLANESPNSVTLVSLVSACT----SLINVRAGESIHSYAVVNGLELDVALGTALVE 245
+ +M + T ++ AC ++ ++ G+ IH++ G V + T LV+
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ--TGLKPDS 303
MY++ G V+ A VF M +N+ SW+ MI+ A NG+ A+ F +M++ P+S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMAR--VYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
++ ++L AC+ L +++GK + R + +I P + +V M GR G +E +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVGQRV 342
Query: 362 IRNM 365
M
Sbjct: 343 FDRM 346
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
LK R+ SP+ T L+ C ++ +H + + NG + D L T L+ M
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
YS G V+ A KVF+ R++ + W + L G G + L+ KM + G++ D ++
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 307 SAILSAC-------SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCM---VDMLGRAGLIE 356
+ +L AC +HL +GK + R + H M VDM R G ++
Sbjct: 182 TYVLKACVASECTVNHLM---KGKEIHAHLTR----RGYSSHVYIMTTLVDMYARFGCVD 234
Query: 357 EAYHIIRNMP 366
A ++ MP
Sbjct: 235 YASYVFGGMP 244
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 240/397 (60%), Gaps = 2/397 (0%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F +P + +YNT+I YA++ +++++ EM T L+PD+FT V+
Sbjct: 196 RRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + G +H + + G+DSD YIG++L+ MYA I+ ++ VF + RD +SW+S+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
+AG+V ++AL++F +M A P +V S++ AC L + G+ +H Y + G
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
++ + +ALV+MYSKCG+++ A K+F+ M + SWT +I G A +G G+ A+SLF +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G+KP+ ++F A+L+ACSH+GLVDE YF+ M +VY + +EHY + D+LGRAG
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
+EEAY+ I M EP + + L +C H + L L + + + + ++ E YVL
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVH-KNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
++ + +G W A+L + + +KGL K P CSW+++ +
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 43/400 (10%)
Query: 6 IETLIQLS---KTVHHLHQLHTLFLKT-SLDHNTCIISRFILTSLSISLHFTRSLFNNLP 61
I+TLI+ K+ QLH F++T SL H + I I T+L + LF L
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHE-ALLLFKTLK 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
+PP+ A+ ++IR + S +++ F EM +G PD+ +P V+K+C + + G
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYA---------------------------------A 148
SVH I ++G+D D Y GN L+ MYA
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 149 CK---EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
C ID + VFE MP +DVVS++++IAG+ DAL++ M + P+S TL
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 206 VSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE 265
S++ + ++V G+ IH Y + G++ DV +G++LV+MY+K +E + +VF+ +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
++ SW +++G NGR N A+ LF +M+ +KP +++FS+++ AC+HL + GK
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
+ R + +VDM + G I+ A I M
Sbjct: 366 HGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 262/480 (54%), Gaps = 41/480 (8%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSIS--------LHFTRSLFNNL 60
L+Q + L +H L+T L + + SR + + S L + +F+ +
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIG 120
P LF +N LIR ++ + ++ + +MLK+ + PDN T+PF++KA + +G
Sbjct: 78 Q-NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
HS I + G +D Y+ N+L+ MYA C I A +F +M RDVVSW+SM+AG+ C
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 181 DSPSDALKVF----HR---------------------------MKLANESPNSVTLVSLV 209
+A ++F HR MK N +VS++
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 210 SACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQ 269
S+C L + GE + Y V + + +++ LGTALV+M+ +CG +EKA VF + E +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 270 SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM 329
SW+ +I GLA +G + A+ F++MI G P ++F+A+LSACSH GLV++G ++ M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 330 ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLY 389
+ + I+P +EHYGC+VDMLGRAG + EA + I M +PNA IL + LGAC+ +
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT-E 435
Query: 390 LDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
+ + +G +L+K++PE YVL +++ + +G WD L + +K + K PG S ++++
Sbjct: 436 VAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 265/461 (57%), Gaps = 12/461 (2%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCI----ISRFILTSLSISLHFTRSLFNNL 60
H+ +LI S HL Q+H L L+TSL N+ + +SR L+ + ++++ +F+
Sbjct: 13 HLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQ- 71
Query: 61 PVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDN-FTYPFVVKACGRCLLIGI 119
+ P L NT+IRA++ + E +LF + + P N + F +K C + +
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG 131
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +H IF G SD + TL+ +Y+ C+ A VF+E+P RD VSW+ + + ++
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 180 CDSPSDALKVFHRMKLANE---SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
D L +F +MK + P+ VT + + AC +L + G+ +H + NGL
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+ L LV MYS+CG ++KA++VF MRE+N+ SWT +ISGLA NG G AI F +M++
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLI 355
G+ P+ + + +LSACSH GLV EG +FD M + + IKP + HYGC+VD+LGRA L+
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASV 415
++AY +I++M +P++ I R+ LGACR HG V L + + L++L+ E +YVL +
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV-ELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 416 SSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEM 456
S G W+ EL + +K ++ PGCS +++ G+ E
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ-GTVHEF 470
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 242/402 (60%), Gaps = 2/402 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
S+ + R LF + P + +N++ R Y++ + +E LF E+L+ G+ PDN+T+P ++
Sbjct: 78 SMSYARHLFEAMS-EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
KAC + G +H L K+GLD + Y+ TL+ MY C+++D A+ VF+ + VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
+++MI G+ + P++AL +F M+ PN +TL+S++S+C L ++ G+ IH YA
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ V + TAL++M++KCG ++ A +F MR K+ Q+W+ MI A++G+ ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I+F +L+ACSH G V+EG+ YF +M + I P+++HYG MVD+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
L RAG +E+AY I +P P ++ R L AC +H L L + + + + +L+ G +
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN-LDLAEKVSERIFELDDSHGGD 435
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YV+ +++ + + W+ L + + KVPGCS ++VN+
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 288 bits (736), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 240/423 (56%), Gaps = 42/423 (9%)
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKACGRCLLIGIGG 121
P LFA N++IRA+ K+ +S + +L +G L+PDN+T F+V+AC + G
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAA-------------------------------CK 150
VH + + G D+D ++ L+ +YA C
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 151 EIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVS 210
++ A+ +FE MP RD ++W++MI+G+ +AL VFH M+L N V ++S++S
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 211 ACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS 270
ACT L + G HSY N +++ V L T LV++Y+KCG +EKA +VF M EKN+ +
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 271 WTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
W+ ++GLA NG G + LF+ M Q G+ P++++F ++L CS +G VDEG+ +FD M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYL 390
+ I+P +EHYGC+VD+ RAG +E+A II+ MP +P+A + S L A R +Y
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR-----MYK 423
Query: 391 DDNLG----KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWV 446
+ LG K +L+LE YVL +++ + S +WD + + ++ KG+ K PGCS +
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
Query: 447 KVN 449
+VN
Sbjct: 484 EVN 486
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 288 bits (736), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 227/382 (59%), Gaps = 2/382 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+Y ++I YA+ + E++KLF+EM + G+ PD +T V+ C R L+ G VH I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ L D ++ N L+ MYA C + A+ VF EM V+D++SW+++I G+ ++AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 188 KVFHRM-KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+F+ + + SP+ T+ ++ AC SL G IH Y + NG D + +LV+M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG + A +F+ + K+L SWT+MI+G +G G AI+LF +M Q G++ D ISF
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++L ACSH GLVDEG +F+ M I+PT+EHY C+VDML R G + +AY I NMP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 367 TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAA 426
P+A I + L CR H V L + + + + +LEPE YVL A++ + + W+
Sbjct: 664 IPPDATIWGALLCGCRIHHDV-KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 427 ELMVAINQKGLNKVPGCSWVKV 448
L I Q+GL K PGCSW+++
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEI 744
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 185/358 (51%), Gaps = 6/358 (1%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLPVTPPLFAYNTL 72
++VH QLH LK+ + + + L + + R +F+ + + ++N++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSI 267
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
I Y + + + +F +ML +G+ D T V C LI +G +VHS+ K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHR 192
+ NTLL MY+ C ++D AKAVF EM R VVS++SMIAG+ +A+K+F
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 193 MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGH 252
M+ SP+ T+ ++++ C + G+ +H + N L D+ + AL++MY+KCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG-LKPDSISFSAILS 311
+++A VF+ MR K++ SW +I G + N N A+SLF +++ PD + + +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 312 ACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMPTE 368
AC+ L D+G+ + R N + H +VDM + G + A+ + ++ ++
Sbjct: 508 ACASLSAFDKGREIHGYIMR--NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 163/310 (52%), Gaps = 2/310 (0%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F+ + + LF +N L+ AK+ SI LF +M+ +G+ D++T+ V K+
Sbjct: 151 VFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G +H I K G +GN+L+ Y + +D A+ VF+EM RDV+SW+S+I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V+ L VF +M ++ + T+VS+ + C + G ++HS V
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ L++MYSKCG ++ A VF M ++++ S+T MI+G A G A+ LF +M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ G+ PD + +A+L+ C+ L+DEGK E + ++ + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 356 EEAYHIIRNM 365
+EA + M
Sbjct: 449 QEAELVFSEM 458
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 70 NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
NT +R + ++ ++KL K + P T V++ C + G V + I
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 130 VGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKV 189
G D +G+ L MY C ++ A VF+E+ + + W+ ++ S ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 190 FHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSK 249
F +M + +S T + + +SL +V GE +H + + +G ++G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 250 CGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAI 309
V+ A KVF+ M E+++ SW +I+G NG +S+F +M+ +G++ D + ++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 310 LSACSHLGLVDEG--------KNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ C+ L+ G K F R N ++DM + G ++ A +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNT---------LLDMYSKCGDLDSAKAV 353
Query: 362 IRNM 365
R M
Sbjct: 354 FREM 357
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LF+++ + L ++ +I Y E+I LF++M + G+ D ++ ++ AC
Sbjct: 556 LFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 116 LIGIGGSVHSLI---FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV-RDVVSWS 171
L+ G +++ K+ + Y ++ M A ++ A E MP+ D W
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYA--CIVDMLARTGDLIKAYRFIENMPIPPDATIWG 672
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSV 203
+++ G ++ H +KLA + V
Sbjct: 673 ALLCG----------CRIHHDVKLAEKVAEKV 694
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 242/401 (60%), Gaps = 9/401 (2%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L+ LF+ +P + ++ T+I AY+K ++++L ML+ +RP+ +TY V++
Sbjct: 112 LNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+C + + +H I K GL+SD ++ + L+ ++A E + A +VF+EM D +
Sbjct: 171 SCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 170 WSSMIAGFVACDSPSD-ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
W+S+I GF A +S SD AL++F RMK A TL S++ ACT L + G H +
Sbjct: 228 WNSIIGGF-AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
V + D+ L ALV+MY KCG +E A +VFN M+E+++ +W+ MISGLA NG A+
Sbjct: 287 V--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M +G KP+ I+ +L ACSH GL+++G YF M ++Y I P EHYGCM+D+
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LG+AG +++A ++ M EP+AV R+ LGACR ++ L + K ++ L+PE
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV-LAEYAAKKVIALDPEDAGT 463
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
Y L +++ + S WD+ E+ + +G+ K PGCSW++VN
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A+K ++ +S T L+ C S V G I + NG + L L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY K + A ++F+ M ++N+ SWT MIS + A+ L M++ ++P+ +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 306 FSAILSACS--------HLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
+S++L +C+ H G++ EG ++ + ++D+ + G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVFAKLGEPED 212
Query: 358 AYHIIRNMPTEPNAVILRSFLGA 380
A + M T +A++ S +G
Sbjct: 213 ALSVFDEMVT-GDAIVWNSIIGG 234
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 265/465 (56%), Gaps = 12/465 (2%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E +++ V L Q+H + T + ++++ I + S ++ +T LF ++P+ P
Sbjct: 13 EAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPL-PD 71
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
F +N++I++ +K + + + ML + + P N+T+ V+K+C + IG VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
G D Y+ L+ Y+ C +++ A+ VF+ MP + +V+W+S+++GF +
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++VF++M+ + P+S T VSL+SAC V G +H Y + GL+L+V LGTAL+
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQTGLKPDSI 304
+YS+CG V KA +VF+ M+E N+ +WT MIS +G G A+ LF KM G P+++
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 305 SFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRN 364
+F A+LSAC+H GLV+EG++ + M + Y + P +EH+ CMVDMLGRAG ++EAY I
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 365 MPTEPNAV---ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
+ A + + LGAC+ H + L + K L+ LEP+ ++V+ +++ +LSG
Sbjct: 372 LDATGKATAPALWTAMLGACKMH-RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGK 430
Query: 422 WDTAAELMVAINQKGLNKVPGCSWVKVNDGS-----AEEMSKETA 461
D + + + + L K G S ++V + + +E +ET
Sbjct: 431 TDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETG 475
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 250/458 (54%), Gaps = 19/458 (4%)
Query: 3 SRHIETLIQLSKTVHHLH-----QLHTLFLKTSLDHNTCIISRFILTSLSISL-HFTRSL 56
SRH T L K V L Q H +K LD + + + I S L F L
Sbjct: 103 SRH--TFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 57 FNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
F+ + + +I + + + E++ F EM KTG+ + T V+KA G+
Sbjct: 161 FDGAE-DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 117 IGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G SVH L + G + D +IG++L+ MY C D A+ VF+EMP R+VV+W+++IA
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+V + VF M ++ +PN TL S++SAC + + G +H Y + N +E+
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
+ GT L+++Y KCG +E+A VF + EKN+ +WT MI+G A +G A LF M+
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLI 355
+ + P+ ++F A+LSAC+H GLV+EG+ F M +N++P +HY CMVD+ GR GL+
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 356 EEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVL 411
EEA +I MP EP V+ + G+C +L+ D LGK ++KL+P Y L
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSC-----LLHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 412 AASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
A++ S S NWD A + + + + K PG SW++V
Sbjct: 515 LANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 199/391 (50%), Gaps = 19/391 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSL--DHNTCIISRFILTSLSISLHF--TRSLFNNLP 61
++TL+ L HL Q+H L L + + +SR + + + F R L L
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQ 63
Query: 62 VTPPLFAYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
T + +++LI ++ T S + M + G+ P T+P ++KA + L
Sbjct: 64 -TLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK-LRDSN 121
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
H+ I K GLDSD ++ N+L+ Y++ D A +F+ +DVV+W++MI GFV
Sbjct: 122 PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVA 238
S S+A+ F MK + N +T+VS++ A + +VR G S+H + G ++ DV
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+G++LV+MY KC + A KVF+ M +N+ +WT +I+G + + + +F +M+++
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME----HYGCMVDMLGRAGL 354
+ P+ + S++LSAC+H+G + G+ Y IK ++E ++D+ + G
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRR-----VHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
+EEA + + E N + + HG
Sbjct: 357 LEEAILVFERL-HEKNVYTWTAMINGFAAHG 386
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 255/471 (54%), Gaps = 39/471 (8%)
Query: 15 TVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYNT 71
T+ L Q+H +KT L +T SR F S S +++ +F + P F +NT
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNP-FVWNT 94
Query: 72 LIRAYAKTSCSIESIKLFDEML--KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFK 129
+IR ++++S +I +F +ML ++P TYP V KA GR G +H ++ K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 130 VGLDSDKYIGNTLLRMY-------------------------------AACKEIDVAKAV 158
GL+ D +I NT+L MY A C ID A+ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 159 FEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINV 218
F+EMP R+ VSW+SMI+GFV DAL +F M+ + P+ T+VSL++AC L
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGL 278
G IH Y V N EL+ + TAL++MY KCG +E+ VF +K L W MI GL
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 279 ADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
A+NG A+ LF+++ ++GL+PDS+SF +L+AC+H G V +F M Y I+P+
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
++HY MV++LG AGL+EEA +I+NMP E + VI S L ACR G V + K L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV-EMAKRAAKCL 453
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
KL+P+ YVL ++ + G ++ A E + + ++ + K GCS ++V+
Sbjct: 454 KKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 213 TSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
T +R + IH+ + GL D V L + + A+ VF + KN W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 272 TIMISGLADNGRGNYAISLFAKMI--QTGLKPDSISFSAILSACSHLGLVDEGKNYF--- 326
+I G + + AIS+F M+ +KP +++ ++ A LG +G+
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 327 --DEMARVYNIKPTMEHY----GCMVD-------MLG--------------RAGLIEEAY 359
+ + I+ TM H GC+++ M+G + GLI++A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 360 HIIRNMPTEPNAVILRSFL-GACRN 383
++ MP + N V S + G RN
Sbjct: 213 NLFDEMP-QRNGVSWNSMISGFVRN 236
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 263/445 (59%), Gaps = 17/445 (3%)
Query: 21 QLHTLFLKT-SLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNTLIRAYAK 78
+LH LK SLD N+ + S + + + R +F+ + + +N +I Y++
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQ 381
Query: 79 TSCSIESIKLFDEMLKT-GLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
E++ LF M ++ GL ++ T VV AC R ++H + K GLD D++
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK--- 194
+ NTL+ MY+ +ID+A +F +M RD+V+W++MI G+V + DAL + H+M+
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 195 --------LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEM 246
+ PNS+TL++++ +C +L + G+ IH+YA+ N L DVA+G+ALV+M
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 561
Query: 247 YSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISF 306
Y+KCG ++ + KVF+ + +KN+ +W ++I +G G AI L M+ G+KP+ ++F
Sbjct: 562 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 621
Query: 307 SAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ +ACSH G+VDEG F M Y ++P+ +HY C+VD+LGRAG I+EAY ++ MP
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 367 TEPN-AVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTA 425
+ N A S LGA R H L + + + L++LEP + ++YVL A++ S +G WD A
Sbjct: 682 RDFNKAGAWSSLLGASRIHNN-LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 426 AELMVAINQKGLNKVPGCSWVKVND 450
E+ + ++G+ K PGCSW++ D
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGD 765
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
L +NT++ + + +E+++ EM+ G+ PD FT V+ AC ++ G +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 126 LIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPS 184
K G LD + ++G+ L+ MY CK++ + VF+ M R + W++MIAG+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 185 DALKVFHRMKL-ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
+AL +F M+ A NS T+ +V AC E+IH + V GL+ D + L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-------- 295
++MYS+ G ++ A ++F M +++L +W MI+G + A+ L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 296 ---QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ LKP+SI+ IL +C+ L + +GK A N+ + +VDM +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
G ++ + + +P + N + + A HG
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHG 597
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG 131
L+R+ +++ E++ + +M+ G++PDN+ +P ++KA + +G +H+ ++K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 132 LDSDKY-IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
D + NTL+ +Y C + VF+ + R+ VSW+S+I+ + + AL+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 191 HRMKLANESPNSVTLVSLVSACTSLI---NVRAGESIHSYAVVNGLELDVALGTALVEMY 247
M N P+S TLVS+V+AC++L + G+ +H+Y + G EL+ + LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
K G + + + ++L +W ++S L N + A+ +M+ G++PD + S
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 308 AILSACSHLGLVDEGK 323
++L ACSHL ++ GK
Sbjct: 307 SVLPACSHLEMLRTGK 322
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 68 AYNTLIRAYAKTSCSIE----SIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL---IGIG 120
++N+LI + CS E +++ F ML + P +FT VV AC + + +G
Sbjct: 166 SWNSLISSL----CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVAC 180
VH+ + G + + +I NTL+ MY ++ +K + RD+V+W+++++
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 181 DSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVAL 239
+ +AL+ M L P+ T+ S++ AC+ L +R G+ +H+YA+ NG L+ + +
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT-G 298
G+ALV+MY C V +VF+ M ++ + W MI+G + N A+ LF M ++ G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH----YGCMVDMLGRAGL 354
L +S + + ++ AC V G E + +K ++ ++DM R G
Sbjct: 401 LLANSTTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 355 IEEAYHIIRNM 365
I+ A I M
Sbjct: 456 IDIAMRIFGKM 466
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 142 LLRMYAACKEIDVAKAVFEEMPV-----RDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
LLR DVA AV + R W ++ V + +A+ + M +
Sbjct: 32 LLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL 91
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVEMYSKCGHVEK 255
P++ +L+ A L ++ G+ IH++ G +D V + LV +Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
+KVF+ + E+N SW +IS L + A+ F M+ ++P S + ++++ACS+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 316 L 316
L
Sbjct: 212 L 212
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 270/511 (52%), Gaps = 69/511 (13%)
Query: 5 HIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFIL---TSLSISLHFTRSLFNNLP 61
H +L+ K + L Q+H LF+K +D ++ + IL S+S +L + R L P
Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIG 120
P F +NTL+R Y+++ S+ +F EM++ G + PD+F++ FV+KA + G
Sbjct: 67 -EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 121 GSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----------------- 163
+H K GL+S ++G TL+ MY C ++ A+ VF+EM
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 164 --------------VRDVVSWSSMIAGFVACDSPSDALKVF----HR------------- 192
VR+ SW+ M+AG++ A ++F HR
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 193 --------------MKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
++ A SPN V+L ++SAC+ + G+ +H + G V+
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKN-LQSWTIMISGLADNGRGNYAISLFAKMIQT 297
+ AL++MYS+CG+V A VF M+EK + SWT MI+GLA +G+G A+ LF +M
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G+ PD ISF ++L ACSH GL++EG++YF EM RVY+I+P +EHYGCMVD+ GR+G +++
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSS 417
AY I MP P A++ R+ LGAC +HG + L + + + L +L+P + VL ++ +
Sbjct: 426 AYDFICQMPIPPTAIVWRTLLGACSSHGNI-ELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKV 448
+G W A + ++ + + K S V+V
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 256/474 (54%), Gaps = 39/474 (8%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFI--LTSLSISLH-FTRSLFNNLPVTPPLFAYNTL 72
++ + Q+H L+ LD + I+++ I LT L + + + R + + P F + +
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP-FLWTAV 120
Query: 73 IRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGL 132
IR YA E+I ++ M K + P +FT+ ++KACG + +G H+ F++
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 133 DSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA----------------- 175
Y+GNT++ MY C+ ID A+ VF+EMP RDV+SW+ +IA
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 176 --------------GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
GF P +AL+ F RM+ + + VT+ +SAC L +
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 222 ESIHSYAVVNGLELD--VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLA 279
+ A +G V +G+AL++MYSKCG+VE+A VF M KN+ +++ MI GLA
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 360
Query: 280 DNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPT 338
+GR A+ LF M+ QT +KP++++F L ACSH GLVD+G+ FD M + + ++PT
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPT 420
Query: 339 MEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLL 398
+HY CMVD+LGR G ++EA +I+ M EP+ + + LGACR H + + + L
Sbjct: 421 RDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNP-EIAEIAAEHL 479
Query: 399 LKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGS 452
+LEP++ NY+L ++V + +G+W + I +KGL K P SWV +G
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQ 533
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 47/313 (15%)
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACK-EID-VAKAVFEEMPVRDVVSWS 171
C+ + +H + + GLD YI L+R +D A+ V E + R+ W+
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 172 SMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV-V 230
++I G+ +A+ ++ M+ +P S T +L+ AC ++ ++ G H+ +
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 231 NGLELDVALGTALVEMYSKCGHVEKAFKVFNLMRE------------------------- 265
G V +G +++MY KC ++ A KVF+ M E
Sbjct: 179 RGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 266 ------KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
K++ +WT M++G A N + A+ F +M ++G++ D ++ + +SAC+ LG
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG-- 295
Query: 320 DEGKNYFD---EMARVYNIKPTMEHY---GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
Y D ++A+ P+ +H ++DM + G +EEA ++ +M + N
Sbjct: 296 --ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-NVFT 351
Query: 374 LRSFLGACRNHGQ 386
S + HG+
Sbjct: 352 YSSMILGLATHGR 364
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 207 SLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF--KVFNLMR 264
SL+S IN+ + IH + + GL+ + T L+ +K G + +V ++
Sbjct: 51 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 265 EKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
+N WT +I G A G+ + AI+++ M + + P S +FSA+L AC + ++ G+
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 325 YFDEMARVYNIKPTMEHYG-CMVDMLGRAGLIEEAYHIIRNMP 366
+ + R+ + G M+DM + I+ A + MP
Sbjct: 171 FHAQTFRLRGF--CFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 251/431 (58%), Gaps = 5/431 (1%)
Query: 20 HQLHTLFLKTSLDHNTCIISRF-ILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
++H +KT T + +R I L R + + +P + ++ +I Y++
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQ 130
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
T S E++ +F EM+++ +P+ FT+ V+ +C R +G+G +H LI K DS ++
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
G++LL MYA +I A+ +FE +P RDVVS +++IAG+ +AL++FHR+
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
SPN VT SL++A + L + G+ H + + L L +L++MYSKCG++ A +
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFSAILSACSHLG 317
+F+ M E+ SW M+ G + +G G + LF M + +KPD+++ A+LS CSH
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 318 LVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
+ D G N FD M A Y KP EHYGC+VDMLGRAG I+EA+ I+ MP++P A +L S
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 377 FLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKG 436
LGACR H V + +++G+ L+++EPE NYV+ +++ + +G W + + QK
Sbjct: 431 LLGACRVHLSV-DIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKA 489
Query: 437 LNKVPGCSWVK 447
+ K PG SW++
Sbjct: 490 VTKEPGRSWIQ 500
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
Y ++ AC + G VH+ + K Y+ LL Y C ++ A+ V +EMP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
++VVSW++MI+ + S+AL VF M ++ PN T +++++C + G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
IH V + + +G++L++MY+K G +++A ++F + E+++ S T +I+G A G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG 343
A+ +F ++ G+ P+ ++++++L+A S L L+D GK A + ++ + Y
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYA 289
Query: 344 C----MVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
++DM + G + A + NMP E A+ + L HG LG+ +L
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG--------LGREVL 340
Query: 400 KL 401
+L
Sbjct: 341 EL 342
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 260/475 (54%), Gaps = 38/475 (8%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPL 66
++++ K + H+ +H ++T D + ++ I ++ S+ + +F+ + P +
Sbjct: 34 SVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS-NPNV 92
Query: 67 FAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
+ Y +I + + S + + L+ M+ + PDN+ V+KAC + + +H+
Sbjct: 93 YLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQ 148
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP----------------------- 163
+ K+G S + +G ++ +Y E+ AK +F+EMP
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 164 --------VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSL 215
++D V W++MI G V + AL++F M++ N S N T V ++SAC+ L
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 216 INVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMI 275
+ G +HS+ +EL +G AL+ MYS+CG + +A +VF +MR+K++ S+ MI
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 276 SGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNI 335
SGLA +G AI+ F M+ G +P+ ++ A+L+ACSH GL+D G F+ M RV+N+
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 336 KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLG 395
+P +EHYGC+VD+LGR G +EEAY I N+P EP+ ++L + L AC+ HG + L + +
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN-MELGEKIA 447
Query: 396 KLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
K L + E YVL +++ + SG W + E+ ++ G+ K PGCS ++V++
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 204 TLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
TL+S++ +C ++ +V SIH+ + + D + L+ + S V+ A+ VF+ +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
N+ +T MI G +GR +SL+ +MI + PD+ +++L AC
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 254/444 (57%), Gaps = 5/444 (1%)
Query: 7 ETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPP 65
E L S L ++H + L+T ++++ + + I + + R +F+ + P
Sbjct: 15 ELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH-KPR 73
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F +NTL + Y + ES+ L+ +M G+RPD FTYPFVVKA + G ++H+
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
+ K G + L+ MY E+ A+ +FE M V+D+V+W++ +A V + +
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+ F++M +S T+VS++SAC L ++ GE I+ A ++ ++ + A ++
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
M+ KCG+ E A +F M+++N+ SW+ MI G A NG A++LF M GL+P+ ++
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 306 FSAILSACSHLGLVDEGKNYFDEMARV--YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
F +LSACSH GLV+EGK YF M + N++P EHY CMVD+LGR+GL+EEAY I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 364 NMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWD 423
MP EP+ I + LGAC H ++ L + +L++ P++G+ +VL +++ + +G WD
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMI-LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 424 TAAELMVAINQKGLNKVPGCSWVK 447
++ + + G KV S V+
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVE 456
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 281 bits (720), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 237/394 (60%), Gaps = 6/394 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +PV + ++ +I + +T E++ F +M + P+ TY V+ + GR
Sbjct: 163 VFGEMPVRD-VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVG 218
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ +G +H LI K GN L+ MY C+++ A VF E+ +D VSW+SMI+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 176 GFVACDSPSDALKVFHRMKLANE-SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
G V C+ +A+ +F M+ ++ P+ L S++SAC SL V G +H Y + G++
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
D +GTA+V+MY+KCG++E A ++FN +R KN+ +W ++ GLA +G G ++ F +M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEM-ARVYNIKPTMEHYGCMVDMLGRAG 353
++ G KP+ ++F A L+AC H GLVDEG+ YF +M +R YN+ P +EHYGCM+D+L RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAA 413
L++EA +++ MP +P+ I + L AC+N G ++ L + L +E E YVL +
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 414 SVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVK 447
++ + + WD A + + KG++KVPG S+++
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 190/391 (48%), Gaps = 24/391 (6%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL----------SISLHFTRSLFN 58
LI ++ Q+ T + L + II++ ++T L S+ LH RS+ +
Sbjct: 12 LISRCSSLRVFKQIQTQLITRDLLRDDLIINK-VVTFLGKSADFASYSSVILHSIRSVLS 70
Query: 59 NLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
+ F+YNTL+ +YA +I + + G PD FT+P V KACG+ I
Sbjct: 71 S-------FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H ++ K+G D Y+ N+L+ Y C E A VF EMPVRDVVSW+ +I GF
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+AL F +M + PN T V ++ + + + G+ IH + + +
Sbjct: 184 RTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM-IQT 297
G AL++MY KC + A +VF + +K+ SW MISGL R AI LF+ M +
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 298 GLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
G+KPD +++LSAC+ LG VD G+ + E IK +VDM + G IE
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGR-WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 358 AYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
A I + ++ N + LG HG L
Sbjct: 360 ALEIFNGIRSK-NVFTWNALLGGLAIHGHGL 389
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 281 bits (719), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 260/469 (55%), Gaps = 39/469 (8%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
L Q H + T L+ + +++FI S + L + S+F + P P + +NT+IRA +
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQP-CPNTYLHNTMIRALS 89
Query: 78 ---KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDS 134
+ + +I ++ ++ +PD FT+PFV+K R + G +H + G DS
Sbjct: 90 LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 149
Query: 135 DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDV--------------------------- 167
++ L++MY +C + A+ +F+EM V+DV
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 168 ------VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAG 221
VSW+ +I+G+ S+A++VF RM + N P+ VTL++++SAC L ++ G
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 269
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
E I SY G+ V+L A+++MY+K G++ KA VF + E+N+ +WT +I+GLA +
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 329
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G G A+++F +M++ G++P+ ++F AILSACSH+G VD GK F+ M Y I P +EH
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH 389
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
YGCM+D+LGRAG + EA +I++MP + NA I S L A H L L + L+KL
Sbjct: 390 YGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD-LELGERALSELIKL 448
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
EP NY+L A++ S G WD + + + G+ K+ G S ++V +
Sbjct: 449 EPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 217 NVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS 276
N++ + H Y ++ GL D +E S GH+ A+ VF N MI
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 277 GLA---DNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
L+ + + AI+++ K+ KPD+ +F +L
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVL 123
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 20/476 (4%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCII---SRFILTSLSIS-LHFTRSLFNN 59
+ I +L + + L QLH L+T+ + + + S S S +++ +F++
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 60 LPVTPPLFAYNTLIRAYA-KTSCSIESIKLFDEMLKTGLR-PDNFTYPFVVKACGRCLLI 117
+ F +NTLIRA A S E+ L+ +ML+ G PD T+PFV+KAC
Sbjct: 109 IE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 118 GIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGF 177
G VH I K G D Y+ N L+ +Y +C +D+A+ VF+EMP R +VSW+SMI
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVN---GLE 234
V AL++F M+ + E P+ T+ S++SAC L ++ G H++ + +
Sbjct: 228 VRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKM 294
+DV + +L+EMY KCG + A +VF M++++L SW MI G A +GR A++ F +M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 295 I--QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+ + ++P+S++F +L AC+H G V++G+ YFD M R Y I+P +EHYGC+VD++ RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPE-------L 405
G I EA ++ +MP +P+AVI RS L AC G + L + + + ++ + +
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 406 GANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
YVL + V + + W+ + +++ G+ K PGCS +++N S E + +T+
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 217/380 (57%), Gaps = 1/380 (0%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
++ +I+ A+ + E+I+ F EM GL+ D + + V+ ACG I G +H+ I
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 128 FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDAL 187
+ Y+G+ L+ MY CK + AK VF+ M ++VVSW++M+ G+ +A+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 188 KVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMY 247
K+F M+ + P+ TL +SAC ++ ++ G H A+ +GL V + +LV +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 248 SKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFS 307
KCG ++ + ++FN M ++ SWT M+S A GR I LF KM+Q GLKPD ++ +
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
++SACS GLV++G+ YF M Y I P++ HY CM+D+ R+G +EEA I MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A+ + L ACRN G L + + L++L+P A Y L +S+ + G WD+ A+
Sbjct: 537 PPDAIGWTTLLSACRNKGN-LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 428 LMVAINQKGLNKVPGCSWVK 447
L + +K + K PG SW+K
Sbjct: 596 LRRGMREKNVKKEPGQSWIK 615
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 80/384 (20%)
Query: 52 FTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC 111
+ R +F+ +P P LF++N L+ AY+K E F+++ D T+ +++
Sbjct: 59 YARRVFDRIP-QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGY 113
Query: 112 GRCLLIG------------------------------------IGGSVHSLIFKVGLDSD 135
L+G +G +H + K+G +S
Sbjct: 114 SLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESY 173
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMK- 194
+G+ LL MYA I AK VF + R+ V ++S++ G +AC DAL++F M+
Sbjct: 174 LLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK 233
Query: 195 ----------------LANES-------------PNSVTLVSLVSACTSLINVRAGESIH 225
LA E+ + S++ AC L + G+ IH
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 226 SYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGN 285
+ + + + +G+AL++MY KC + A VF+ M++KN+ SWT M+ G GR
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 286 YAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY--- 342
A+ +F M ++G+ PD + +SAC+++ ++EG + + I + HY
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTV 408
Query: 343 -GCMVDMLGRAGLIEEAYHIIRNM 365
+V + G+ G I+++ + M
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 119/293 (40%), Gaps = 79/293 (26%)
Query: 104 YPFVVKACGRCLLIGIGGS--------VHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVA 155
Y +K C IG+G +H I + + ++ N ++ YA K A
Sbjct: 6 YSVQIKQC-----IGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYA 60
Query: 156 KAV-------------------------------FEEMPVRDVVSWSSMIAGFVACDSPS 184
+ V FE++P RD V+W+ +I G+
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVG 120
Query: 185 DALKVFHRMKLANESPN--SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTA 242
A+K ++ M + + S N VTL++++ +S +V G+ IH + G E + +G+
Sbjct: 121 AAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 243 LVEMYSK-------------------------------CGHVEKAFKVFNLMREKNLQSW 271
L+ MY+ CG +E A ++F M EK+ SW
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSW 238
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKN 324
MI GLA NG AI F +M GLK D F ++L AC LG ++EGK
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 248/429 (57%), Gaps = 4/429 (0%)
Query: 21 QLHTLFLKTSLDHNTCIISRFILTSLSIS-LHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H ++ L NT I + + + L + +F+ + V P+ A L+ Y +
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV-ACTGLMVGYTQA 263
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ +++KLF +++ G+ D+F + V+KAC + +G +H+ + K+GL+S+ +G
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
L+ Y C + A F+E+ + VSWS++I+G+ +A+K F ++ N S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 200 P-NSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
NS T S+ AC+ L + G +H+ A+ L +AL+ MYSKCG ++ A +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++ +WT ISG A G + A+ LF KM+ G+KP+S++F A+L+ACSH GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V++GK+ D M R YN+ PT++HY CM+D+ R+GL++EA ++NMP EP+A+ + FL
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
C H L L + G+ L +L+PE A YVL ++ + +G W+ AAE+M +N++ L
Sbjct: 564 SGCWTHKN-LELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 439 KVPGCSWVK 447
K CSW++
Sbjct: 623 KELSCSWIQ 631
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 9/319 (2%)
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
T+I AYA+ +++ LF ML +G +P + Y ++K+ + G +H+ + +
Sbjct: 154 TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRA 213
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
GL S+ I ++ MY C + AK VF++M V+ V+ + ++ G+ DALK+F
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
+ +S ++ AC SL + G+ IH+ GLE +V++GT LV+ Y KC
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP-DSISFSAI 309
E A + F +RE N SW+ +ISG + A+ F + +S ++++I
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 310 LSACSHLGLVD-EGKNYFDEMARVYNIKPTMEHYG--CMVDMLGRAGLIEEAYHIIRNMP 366
ACS L + G+ + D + R YG ++ M + G +++A + +M
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSL----IGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 367 TEPNAVILRSFLGACRNHG 385
P+ V +F+ +G
Sbjct: 450 N-PDIVAWTAFISGHAYYG 467
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 84 ESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK-YIGNTL 142
E+ + EM K G+ +++Y + +AC + G +H + ++G+++ + N +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124
Query: 143 LRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNS 202
L+MY C+ ++ A +F+EM + VS ++MI+ + A+ +F M + + P S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 203 VTLVSLVSACTSLINVRA---GESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
+L+ SL+N RA G IH++ + GL + ++ T +V MY KCG + A +V
Sbjct: 185 SMYTTLLK---SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ M K + T ++ G GR A+ LF ++ G++ DS FS +L AC+ L +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 320 DEGKN 324
+ GK
Sbjct: 302 NLGKQ 306
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTAL 243
++A + M A S +S + L AC L ++ G +H + V L +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 244 VEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDS 303
++MY +C +E A K+F+ M E N S T MIS A+ G + A+ LF+ M+ +G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 304 ISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIR 363
++ +L + + +D G+ + R T G +V+M + G + A +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG-IVNMYVKCGWLVGAKRVFD 243
Query: 364 NM 365
M
Sbjct: 244 QM 245
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 266 KNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNY 325
K Q + + L+ + + N A +M + G+ S S+ + AC L + G+
Sbjct: 46 KQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLL 105
Query: 326 FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
D M R+ P++ C++ M +E+A + M +E NAV + + A G
Sbjct: 106 HDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM-SELNAVSRTTMISAYAEQG 163
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 275 bits (704), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 252/448 (56%), Gaps = 17/448 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
LI K++ +L Q+H + L H+T +S+ + S ++ L + S+ +P P +F
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIP-NPSVFL 73
Query: 69 YNTLIRAYAKTSCSIES---IKLFDEMLKTG---LRPDNFTYPFVVKACG---RCLLIGI 119
YNTLI + S ++ L+D++L + +RP+ FTYP + KA G + G
Sbjct: 74 YNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGR 133
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV- 178
H L F ++ D+++ L+ YA C ++ A+++FE + D+ +W++++A +
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 179 --ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
DS + L +F RM++ PN ++LV+L+ +C +L G H Y + N L L+
Sbjct: 194 SEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
+GT+L+++YSKCG + A KVF+ M ++++ + MI GLA +G G I L+ +I
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS 310
Query: 297 TGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIE 356
GL PDS +F +SACSH GLVDEG F+ M VY I+P +EHYGC+VD+LGR+G +E
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 357 EAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVS 416
EA I+ MP +PNA + RSFLG+ + HG + L K LL LE E NYVL +++
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIAL-KHLLGLEFENSGNYVLLSNIY 429
Query: 417 SLSGNWDTAAELMVAINQKGLNKVPGCS 444
+ W + + +NK PG S
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 249/468 (53%), Gaps = 41/468 (8%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
Q+H+L K+ + I S + + S +++ + +F+ + + ++N+LI + +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQN 231
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVG-LDSDKYI 138
++E++ +F ML++ + PD T V+ AC I +G VH + K L +D +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDV------------------------------- 167
N + MYA C I A+ +F+ MP+R+V
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 168 VSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY 227
VSW+++IAG+ +AL +F +K + P + +++ AC L + G H +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 228 AVVNGL------ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ +G E D+ +G +L++MY KCG VE+ + VF M E++ SW MI G A N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 282 GRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEH 341
G GN A+ LF +M+++G KPD I+ +LSAC H G V+EG++YF M R + + P +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 342 YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKL 401
Y CMVD+LGRAG +EEA +I MP +P++VI S L AC+ H + L + + LL++
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT-LGKYVAEKLLEV 590
Query: 402 EPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVN 449
EP YVL +++ + G W+ + ++ ++G+ K PGCSW+K+
Sbjct: 591 EPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 48/353 (13%)
Query: 55 SLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRC 114
SLF ++P +N+++ +A+ E++ F M K G + +++ V+ AC
Sbjct: 107 SLFRSMPERDQC-TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165
Query: 115 LLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
+ G VHSLI K SD YIG+ L+ MY+ C ++ A+ VF+EM R+VVSW+S+I
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-L 233
F +AL VF M + P+ VTL S++SAC SL ++ G+ +H V N L
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFN-------------------------------L 262
D+ L A V+MY+KC +++A +F+
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 263 MREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG 322
M E+N+ SW +I+G NG A+SLF + + + P SF+ IL AC+ L + G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 323 KNYFDEMARVYNIKPTMEHY----------GCMVDMLGRAGLIEEAYHIIRNM 365
A V+ +K + ++DM + G +EE Y + R M
Sbjct: 406 MQ-----AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 31/275 (11%)
Query: 123 VHSLIFKVGLDSDKYIGNTLLRMYAACKEI------------------------------ 152
VH+ + K G ++ +I N L+ Y+ C +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 153 -DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA 211
D A ++F MP RD +W+SM++GF D +AL F M N + S++SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 212 CTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSW 271
C+ L ++ G +HS + DV +G+ALV+MYSKCG+V A +VF+ M ++N+ SW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 272 TIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMAR 331
+I+ NG A+ +F M+++ ++PD ++ ++++SAC+ L + G+ + +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 332 VYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMP 366
++ + VDM + I+EA I +MP
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 45/257 (17%)
Query: 195 LANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVE 254
+ SP + L S + + S I VR +H+ + +G ++ + L++ YSKCG +E
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRY---VHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 255 KAFKVFNLMREKNLQ-------------------------------SWTIMISGLADNGR 283
+VF+ M ++N+ +W M+SG A + R
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHY- 342
A+ FA M + G + SF+++LSACS L +++G +A+ P +
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK----SPFLSDVY 188
Query: 343 --GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLK 400
+VDM + G + +A + M + N V S + +G + + L +
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEM-GDRNVVSWNSLITCFEQNGPAV---EALDVFQMM 244
Query: 401 LEPELGANYVLAASVSS 417
LE + + V ASV S
Sbjct: 245 LESRVEPDEVTLASVIS 261
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 274 bits (701), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 253/452 (55%), Gaps = 5/452 (1%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIIS---RFILTSLSISLHFTRSLFNN 59
+R I ++Q ++ L ++H+ + L H+ I + RF S++ SL + LF++
Sbjct: 5 ARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIG 118
P +N LIR ++ +S + SI ++ ML + + RPD FT+ F +K+C R I
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+H + + G D + +L+R Y+A +++A VF+EMPVRD+VSW+ MI F
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+ AL ++ RM +S TLV+L+S+C + + G +H A E V
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTG 298
+ AL++MY+KCG +E A VFN MR++++ +W MI G +G G AIS F KM+ +G
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 299 LKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEA 358
++P++I+F +L CSH GLV EG +F+ M+ +++ P ++HYGCMVD+ GRAG +E +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 359 YHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSL 418
+I + V+ R+ LG+C+ H + L L + K L++LE +YVL S+ S
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIH-RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 419 SGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ + A + I L VPG SW+++ D
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGD 455
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 271/522 (51%), Gaps = 81/522 (15%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILT-SLSI--SLHFTRSLFNN 59
+R L Q K + L Q+H + L N ++ I + SLS+ +L + LF+
Sbjct: 12 NRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDE 71
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
+P P + N ++R A++ +++ L+ EM K G+ PD +T+ FV+KAC +
Sbjct: 72 IP-KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKE---------------------------- 151
G + H + + G ++Y+ N L+ +A C +
Sbjct: 131 GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK 190
Query: 152 ---IDVAKAVFEEMPV-------------------------------RDVVSWSSMIAGF 177
ID A +F+EMP +DVV+W++MI+G+
Sbjct: 191 RGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 178 VACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSY-----AVVNG 232
V C P +AL +F M+ A E P+ VT++SL+SAC L ++ G+ +H Y +V +
Sbjct: 251 VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
+ + + AL++MY+KCG +++A +VF +++++L +W +I GLA + +I +F
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
+M + + P+ ++F ++ ACSH G VDEG+ YF M +YNI+P ++HYGCMVDMLGRA
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 353 GLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGAN 408
G +EEA+ + +M EPNA++ R+ LGAC+ +G V LGK LL + + +
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNV-----ELGKYANEKLLSMRKDESGD 484
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
YVL +++ + +G WD ++ + + K G S ++ +D
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 241/450 (53%), Gaps = 44/450 (9%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLR-PDNFTYPFV 107
+ + LFN + P +F YN++IRAY S + I+++ ++L+ PD FT+PF+
Sbjct: 57 DMDYATRLFNQVS-NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFM 115
Query: 108 VKAC---GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPV 164
K+C G C L G VH + K G N L+ MY ++ A VF+EM
Sbjct: 116 FKSCASLGSCYL---GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE 172
Query: 165 RDVVSWSS-------------------------------MIAGFVACDSPSDALKVFHRM 193
RDV+SW+S MI+G+ +A+ F M
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 194 KLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHV 253
+LA P+ ++L+S++ +C L ++ G+ IH YA G + AL+EMYSKCG +
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 254 EKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSAC 313
+A ++F M K++ SW+ MISG A +G + AI F +M + +KP+ I+F +LSAC
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 314 SHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVI 373
SH+G+ EG YFD M + Y I+P +EHYGC++D+L RAG +E A I + MP +P++ I
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI 412
Query: 374 LRSFLGACRNHGQVLYLDDNLGKL--LLKLEPELGANYVLAASVSSLSGNWDTAAELMVA 431
S L +CR G LD L + L++LEPE NYVL A++ + G W+ + L
Sbjct: 413 WGSLLSSCRTPGN---LDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 432 INQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
I + + K PG S ++VN+ E +S + +
Sbjct: 470 IRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/167 (17%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 222 ESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADN 281
+ I++ +++GL + T +V+ K ++ A ++FN + N+ + +I N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 282 GRGNYAISLFAKMIQTGLK-PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTME 340
I ++ ++++ + PD +F + +C+ LG GK + + + + +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK-FGPRFHVV 145
Query: 341 HYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQV 387
++DM + + +A+ + M E + + S L GQ+
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGYARLGQM 191
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 246/441 (55%), Gaps = 9/441 (2%)
Query: 8 TLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVT 63
TLI + LHQ H +K+ ++ ++C+++ + + + R +FN
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 64 PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSV 123
L + +I Y E++ LF +M ++P+ T V+ CG + +G SV
Sbjct: 307 D-LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 124 HSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSP 183
H L KVG+ D + N L+ MYA C + AK VFE +D+V+W+S+I+GF S
Sbjct: 366 HGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL--ELDVALGT 241
+AL +FHRM + +PN VT+ SL SAC SL ++ G S+H+Y+V G V +GT
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
AL++ Y+KCG + A +F+ + EKN +W+ MI G G ++ LF +M++ KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
+ +F++ILSAC H G+V+EGK YF M + YN P+ +HY CMVDML RAG +E+A I
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGN 421
I MP +P+ +FL C H + L + + K +L L P+ + YVL +++ + G
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSR-FDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGR 663
Query: 422 WDTAAELMVAINQKGLNKVPG 442
W+ A E+ + Q+GL+K+ G
Sbjct: 664 WNQAKEVRNLMKQRGLSKIAG 684
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 178/366 (48%), Gaps = 34/366 (9%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P P + + ++R Y S+E +KL+D ++K G R D+ + +KAC
Sbjct: 96 RLVFDQIP-EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ G +H + KV D + LL MYA C EI A VF ++ +R+VV W+SM
Sbjct: 155 LQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
IAG+V D + L +F+RM+ N N T +L+ ACT L + G+ H V +G+
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
EL L T+L++MY KCG + A +VFN +L WT MI G NG N A+SLF K
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV----YNIKPTMEH-------- 341
M +KP+ ++ +++LS C + ++ G++ +V N+ + H
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQN 393
Query: 342 -----------------YGCMVDMLGRAGLIEEAYHIIRNMPTE---PNAVILRSFLGAC 381
+ ++ + G I EA + M +E PN V + S AC
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 382 RNHGQV 387
+ G +
Sbjct: 454 ASLGSL 459
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 168/334 (50%), Gaps = 4/334 (1%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+FN++ + + + ++I Y K E + LF+ M + + + +TY ++ AC +
Sbjct: 198 VFNDITLRN-VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+ G H + K G++ + +LL MY C +I A+ VF E D+V W++MI
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 176 GFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLEL 235
G+ S ++AL +F +MK PN VT+ S++S C + N+ G S+H ++ G+
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-W 375
Query: 236 DVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI 295
D + ALV MY+KC A VF + EK++ +W +ISG + NG + A+ LF +M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 296 QTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDMLGRAGL 354
+ P+ ++ +++ SAC+ LG + G + ++ + + H G ++D + G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 355 IEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVL 388
+ A +I + E N + + +G G +
Sbjct: 496 PQSA-RLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 208 LVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKN 267
L+S CT++ ++R H NGL D+++ T LV +Y G+ + A VF+ + E +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 268 LQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFD 327
W +M+ N + L+ +++ G + D I FS L AC+ L +D GK
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 328 EMARVYNIKPTMEH--YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGA 380
++ +V P+ ++ ++DM + G I+ A H + N T N V S +
Sbjct: 167 QLVKV----PSFDNVVLTGLLDMYAKCGEIKSA-HKVFNDITLRNVVCWTSMIAG 216
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 256/471 (54%), Gaps = 43/471 (9%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
+LH +K L N + + + + SL + R +F+ +F++N +I Y +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMISGYNRM 214
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
ESI+L EM + + P + T V+ AC + + VH + + + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 140 NTLLRMYAACKEIDVA-------------------------------KAVFEEMPVRDVV 168
N L+ YAAC E+D+A + F++MPVRD +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW+ MI G++ +++L++F M+ A P+ T+VS+++AC L ++ GE I +Y
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
N ++ DV +G AL++MY KCG EKA KVF+ M +++ +WT M+ GLA+NG+G AI
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
+F +M ++PD I++ +LSAC+H G+VD+ + +F +M + I+P++ HYGCMVDM
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPE 404
LGRAGL++EAY I+R MP PN+++ + LGA R H D+ + +L +L+LEP+
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-----DEPMAELAAKKILELEPD 569
Query: 405 LGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEE 455
GA Y L ++ + W E+ I + K PG S ++VN G A E
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVN-GFAHE 619
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 44/401 (10%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNN 59
SR I +++ + KT QLH+ + + N + F + L + + LF
Sbjct: 35 SRFI-SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 60 LPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR-CLLIG 118
+P P + +N +I+ ++K C E ++L+ MLK G+ PD+ T+PF++ R +
Sbjct: 94 IP-EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H + K GL S+ Y+ N L++MY+ C +D+A+ VF+ DV SW+ MI+G+
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVA 238
+++++ M+ SP SVTL+ ++SAC+ + + + +H Y E +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 239 LGTALVEMYSKCGHVEKAFKVFNLMREK----------------NLQ------------- 269
L ALV Y+ CG ++ A ++F M+ + NL+
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 270 --SWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG---KN 324
SWTIMI G G N ++ +F +M G+ PD + ++L+AC+HLG ++ G K
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 325 YFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNM 365
Y D+ IK + ++DM + G E+A + +M
Sbjct: 393 YIDK----NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 237/431 (54%), Gaps = 2/431 (0%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH L + T + + ++ + S + TR LF+ +P +YN +I +Y++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD-FVSYNVVISSYSQ 328
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYI 138
S+ F EM G NF + ++ + +G +H DS ++
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 139 GNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
GN+L+ MYA C+ + A+ +F+ +P R VSW+++I+G+V LK+F +M+ +N
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
+ T +++ A S ++ G+ +H++ + +G +V G+ LV+MY+KCG ++ A +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
VF M ++N SW +IS ADNG G AI FAKMI++GL+PDS+S +L+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFL 378
V++G YF M+ +Y I P +HY CM+D+LGR G EA ++ MP EP+ ++ S L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 379 GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLN 438
ACR H + KL + A YV +++ + +G W+ ++ A+ ++G+
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 439 KVPGCSWVKVN 449
KVP SWV+VN
Sbjct: 689 KVPAYSWVEVN 699
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 6/368 (1%)
Query: 21 QLHTLFLKTSLDHNTCI-ISRFILTSLS--ISLHFTRSLFNNLPVTPPLFAYNTLIRAYA 77
Q+H +K D N + +S +L S L LF +P + +NTLI Y
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV-TFNTLITGYE 226
Query: 78 KTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKY 137
K ESI LF +M ++G +P +FT+ V+KA +G +H+L G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+GN +L Y+ + + +F+EMP D VS++ +I+ + D +L F M+
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
+ +++S +L +++ G +H A++ + + +G +LV+MY+KC E+A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
+F + ++ SWT +ISG G + LF KM + L+ D +F+ +L A +
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSF 377
+ GK + R N++ G +VDM + G I++A + MP + NAV +
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNAL 524
Query: 378 LGACRNHG 385
+ A ++G
Sbjct: 525 ISAHADNG 532
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 161/318 (50%), Gaps = 8/318 (2%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTG--LRPDNFTYPFVVKAC 111
R LF+ +P + + L+ YA+ S E+ KLF +M ++ PD+ T+ ++ C
Sbjct: 99 RDLFDAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 112 GRCLLIGIGGSVHSLIFKVGLDSDKY--IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
+ G VH+ K+G D++ + + N LL+ Y + +D+A +FEE+P +D V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
++++I G+ ++++ +F +M+ + P+ T ++ A L + G+ +H+ +V
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
G D ++G +++ YSK V + +F+ M E + S+ ++IS + + ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYG-CMVDM 348
F +M G + F+ +LS ++L + G+ + + ++ H G +VDM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA--LLATADSILHVGNSLVDM 395
Query: 349 LGRAGLIEEAYHIIRNMP 366
+ + EEA I +++P
Sbjct: 396 YAKCEMFEEAELIFKSLP 413
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
NT++ + ++ A+ +F+ MP R VV+W+ ++ + +A K+F +M ++
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 200 --PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD--VALGTALVEMYSKCGHVEK 255
P+ VT +L+ C + A +H++AV G + + + + L++ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
A +F + EK+ ++ +I+G +G +I LF KM Q+G +P +FS +L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-- 260
Query: 316 LGLVD 320
+GL D
Sbjct: 261 VGLHD 265
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ G + D +VE + G V A KV++ M KN S MISG G + A
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 289 SLFAKMIQTGLKPDS--ISFSAILSACSHLGLVDEGKNYFDEMAR 331
LF M PD ++++ ++ + DE F +M R
Sbjct: 100 DLFDAM------PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 246/438 (56%), Gaps = 14/438 (3%)
Query: 21 QLHTLFLKTSL--DHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
QLH+ +++ L D ++ + S S+ R +F+ + + ++ LI Y K
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMK 348
Query: 79 T-SCSIESIKLFDEMLKTG-LRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
+ + E+I LF EM+ G + P++FT+ KACG +G V FK GL S+
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N+++ M+ ++ A+ FE + +++VS+++ + G + A K+ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
++ T SL+S ++ ++R GE IHS V GL + + AL+ MYSKCG ++ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
+VFN M +N+ SWT MI+G A +G + F +MI+ G+KP+ +++ AILSACSH+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GLV EG +F+ M + IKP MEHY CMVD+L RAGL+ +A+ I MP + + ++ R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 377 FLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
FLGACR H LGKL +L+L+P A Y+ +++ + +G W+ + E+ +
Sbjct: 649 FLGACRVHSNT-----ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 433 NQKGLNKVPGCSWVKVND 450
++ L K GCSW++V D
Sbjct: 704 KERNLVKEGGCSWIEVGD 721
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 186/361 (51%), Gaps = 18/361 (4%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLI 127
+++ ++ Y +++IK+F E L+ GL P+++ Y V++AC +G+G +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 128 FKVG-LDSDKYIGNTLLRMYAACKE-IDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
K G +SD +G +L+ M+ + + A VF++M +VV+W+ MI + P +
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
A++ F M L+ + TL S+ SAC L N+ G+ +HS+A+ +GL DV +LV+
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVD 310
Query: 246 MYSKC---GHVEKAFKVFNLMREKNLQSWTIMISGLADNGR-GNYAISLFAKMIQTG-LK 300
MY+KC G V+ KVF+ M + ++ SWT +I+G N AI+LF++MI G ++
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 301 PDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYH 360
P+ +FS+ AC +L GK + A + ++ M ++ +E+A
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 361 IIRNMPTEPNAVILRSFL-GACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLS 419
++ +E N V +FL G CRN L + L E ELG + AS+ LS
Sbjct: 430 AFESL-SEKNLVSYNTFLDGTCRN----LNFEQAFKLLSEITERELGVSAFTFASL--LS 482
Query: 420 G 420
G
Sbjct: 483 G 483
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 63/427 (14%)
Query: 85 SIKLFDEMLKTGLRP-DNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLL 143
++ D M + G+RP D+ T+ ++K+C R +G VH+ + + ++ D + N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 144 RMYAACKEIDVAKAVFEEMP---VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESP 200
+Y+ + A+ VFE M RDVVSWS+M+A + DA+KVF P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 201 NSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDVALGTALVEMYSKCGH-VEKAFK 258
N +++ AC++ V G + + G E DV +G +L++M+ K + E A+K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL-- 316
VF+ M E N+ +WT+MI+ G AI F M+ +G + D + S++ SAC+ L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 317 --------------GLVDE-------------GKNYFDEMARVYNIKPTMEHYGCM---- 345
GLVD+ D+ +V++ ME + M
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFD---RMEDHSVMSWTA 341
Query: 346 --VDMLGRAGLIEEAYHIIRNMPT----EPNAVILRSFLGACRNHGQVLYLDDNLGKLLL 399
+ L EA ++ M T EPN S AC N D +GK +L
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS-----DPRVGKQVL 396
Query: 400 --KLEPELGANYVLAASVSSL---SGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAE 454
+ L +N +A SV S+ S + A ++++K L S+ DG+
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL-----VSYNTFLDGTCR 451
Query: 455 EMSKETA 461
++ E A
Sbjct: 452 NLNFEQA 458
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 255/444 (57%), Gaps = 18/444 (4%)
Query: 21 QLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRAYAKT 79
LH+L +K +H+ ++ + + S S L+ LF+ +P + + L Y +
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTALFSGYTTS 190
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG---IGGSVHSLIFKVGLDSDK 136
E+I LF +M++ G++PD++ F+V+ C+ +G G + + ++ + +
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSY---FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
++ TL+ +YA C +++ A++VF+ M +D+V+WS+MI G+ + P + +++F +M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKA 256
N P+ ++V +S+C SL + GE S + ++ + AL++MY+KCG + +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 257 FKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHL 316
F+VF M+EK++ ISGLA NG + ++F + + G+ PD +F +L C H
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 317 GLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRS 376
GL+ +G +F+ ++ VY +K T+EHYGCMVD+ GRAG++++AY +I +MP PNA++ +
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 377 FLGACRNHGQVLYLDDNLGKLLLK----LEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
L CR L D L + +LK LEP NYV +++ S+ G WD AAE+ +
Sbjct: 488 LLSGCR-----LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 433 NQKGLNKVPGCSWVKVNDGSAEEM 456
N+KG+ K+PG SW+++ +G E
Sbjct: 543 NKKGMKKIPGYSWIEL-EGKVHEF 565
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 205/388 (52%), Gaps = 10/388 (2%)
Query: 4 RHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVT 63
+ I+TLI ++ TV+HL Q+H + L H+T +++ L +L F ++ ++ L +
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLL----LKRTLFFRQTKYSYLLFS 69
Query: 64 ----PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGI 119
P +F YN+LI + E++ LF + K GL FT+P V+KAC R +
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 120 GGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVA 179
G +HSL+ K G + D +LL +Y+ ++ A +F+E+P R VV+W+++ +G+
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 180 CDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVAL 239
+A+ +F +M P+S +V ++SAC + ++ +GE I Y ++ + +
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGL 299
T LV +Y+KCG +EKA VF+ M EK++ +W+ MI G A N I LF +M+Q L
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 300 KPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAY 359
KPD S LS+C+ LG +D G+ + R + + ++DM + G + +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 360 HIIRNMPTEPNAVILRSFLGACRNHGQV 387
+ + M E + VI+ + + +G V
Sbjct: 369 EVFKEMK-EKDIVIMNAAISGLAKNGHV 395
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 271 bits (692), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 241/429 (56%), Gaps = 4/429 (0%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS 80
+H L +K LD + + + + ++ + +F+ +PV + + L++ Y K S
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL-WGVLMKGYLKYS 189
Query: 81 CSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL-IFKVGLDSDKYIG 139
E +LF M TGL D T +VKACG +G VH + I + +D Y+
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+++ MY C+ +D A+ +FE R+VV W+++I+GF C+ +A +F +M +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
PN TL +++ +C+SL ++R G+S+H Y + NG+E+D T+ ++MY++CG+++ A V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F++M E+N+ SW+ MI+ NG A+ F KM + P+S++F ++LSACSH G V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
EG F+ M R Y + P EHY CMVD+LGRAG I EA I NMP +P A + L
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 380 ACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNK 439
ACR H +V L + + LL +EPE + YVL +++ + +G W+ + + KG K
Sbjct: 490 ACRIHKEV-DLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Query: 440 VPGCSWVKV 448
G S +V
Sbjct: 549 HVGQSATEV 557
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 206/423 (48%), Gaps = 38/423 (8%)
Query: 3 SRHIETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSL-SISLHFTRSLFNNLP 61
+R + T++ +KT++H Q+H + + + S + S L F S FN +P
Sbjct: 7 ARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66
Query: 62 VTPP-LFAYNTLIRAYAK--TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIG 118
++NT++ Y+K T C + + L++ M + D+F F +KAC L+
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
G +H L K GLD D Y+ +L+ MYA ++ A+ VF+E+PVR+ V W ++ G++
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 179 ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG-LELDV 237
+ ++F M+ + +++TL+ LV AC ++ + G+ +H ++ ++
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 238 ALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQT 297
L ++++MY KC ++ A K+F ++N+ WT +ISG A R A LF +M++
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 298 GLKPDSISFSAILSACSHLGLVDEGK-------------------NYFDEMARVYNIK-- 336
+ P+ + +AIL +CS LG + GK ++ D AR NI+
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 337 ---------PTMEHYGCMVDMLGRAGLIEEA---YHIIRNMPTEPNAVILRSFLGACRNH 384
+ + M++ G GL EEA +H +++ PN+V S L AC +
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 385 GQV 387
G V
Sbjct: 427 GNV 429
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 258/468 (55%), Gaps = 40/468 (8%)
Query: 14 KTVHHLHQLHTLFLKTSLDHNTCIISR---FILTSLSISLHFTRSLFNNLPVTPPLFAYN 70
K++ L+++HTL + L +S+ F S S + + + L PP + +N
Sbjct: 19 KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLS-DPPNYGWN 77
Query: 71 TLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
+IR ++ + +SI ++ +ML+ GL PD+ TYPF++K+ R +GGS+H + K
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP--------------------------- 163
GL+ D +I NTL+ MY + ++ A+ +F+EMP
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 164 ----VRDVVSWSSMIAGFVACDSPSDALKVFHRM-KLANESPNSVTLVSLVSACTSLINV 218
RDVV+WSSMI G+V + AL++F +M ++ + N VT+VS++ AC L +
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 219 RAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIMIS 276
G+++H Y + L L V L T+L++MY+KCG + A+ VF ++E + W +I
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 277 GLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIK 336
GLA +G ++ LF KM ++ + PD I+F +L+ACSH GLV E ++F + + +
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAE 376
Query: 337 PTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGK 396
P EHY CMVD+L RAGL+++A+ I MP +P +L + L C NHG L L + +GK
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGN-LELAETVGK 435
Query: 397 LLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCS 444
L++L+P YV A+V +++ + A + A+ +KG+ K+ G S
Sbjct: 436 KLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHS 483
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 268 bits (685), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 53 TRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACG 112
R +F+ PV L ++N LI Y K + ++I ++ M G++PD+ T +V +C
Sbjct: 210 ARKVFDESPVRD-LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEI-------------------- 152
+ G + + + GL + N L+ M++ C +I
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 153 -----------DVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPN 201
DV++ +F++M +DVV W++MI G V DAL +F M+ +N P+
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 202 SVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFN 261
+T++ +SAC+ L + G IH Y L L+VALGT+LV+MY+KCG++ +A VF+
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH 448
Query: 262 LMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDE 321
++ +N ++T +I GLA +G + AIS F +MI G+ PD I+F +LSAC H G++
Sbjct: 449 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 322 GKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGAC 381
G++YF +M +N+ P ++HY MVD+LGRAGL+EEA ++ +MP E +A + + L C
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 382 RNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVP 441
R HG V L + K LL+L+P YVL + + W+ A +N++G+ K+P
Sbjct: 569 RMHGNV-ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIP 627
Query: 442 GCSWVKVN 449
GCS ++VN
Sbjct: 628 GCSSIEVN 635
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 208/416 (50%), Gaps = 40/416 (9%)
Query: 8 TLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSIS--LHFTRSLFNNLPVTP 64
+L++ K + HL Q+ + L + SR I +LS S L ++ + + P
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE-NP 116
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGL---RPDNFTYPFVVKACGRCLLIGIGG 121
+F++N IR ++++ ES L+ +ML+ G RPD+FTYP + K C L +G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
+ + K+ L+ ++ N + M+A+C +++ A+ VF+E PVRD+VSW+ +I G+
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A+ V+ M+ P+ VT++ LVS+C+ L ++ G+ + Y NGL + + L
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNG------------------- 282
AL++M+SKCG + +A ++F+ + ++ + SWT MISG A G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 283 ------------RGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMA 330
RG A++LF +M + KPD I+ LSACS LG +D G +
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYI 415
Query: 331 RVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
Y++ + +VDM + G I EA + + T N++ + +G HG
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 41/351 (11%)
Query: 16 VHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFAYNTLIRA 75
+H ++ K ++ T +IS + L L +R LF+++ + +N +I
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGL---LDVSRKLFDDME-EKDVVLWNAMIGG 363
Query: 76 YAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSD 135
+ +++ LF EM + +PD T + AC + + +G +H I K L +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 136 KYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKL 195
+G +L+ MYA C I A +VF + R+ ++++++I G S A+ F+ M
Sbjct: 424 VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 483
Query: 196 ANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEK 255
A +P+ +T + L+SAC ++ G S +M S+
Sbjct: 484 AGIAPDEITFIGLLSACCHGGMIQTGRDYFS------------------QMKSR------ 519
Query: 256 AFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSH 315
FNL L+ ++IM+ L G A L M ++ D+ + A+L C
Sbjct: 520 ----FNL--NPQLKHYSIMVDLLGRAGLLEEADRLMESM---PMEADAAVWGALLFGCRM 570
Query: 316 LGLVDEGKNYFDEMARVYNIKPTMEHYGCMVD-MLGRAGLIEEAYHIIRNM 365
G V+ G+ ++ + P+ ++D M G A + E+A R M
Sbjct: 571 HGNVELGEK---AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 234/402 (58%), Gaps = 3/402 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
L R +F +P L A+N++I+ Y S +++ + M+ G RP T ++
Sbjct: 259 LEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
AC R + G +H + + +++D Y+ +L+ +Y C E ++A+ VF + S
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
W+ MI+ +++ + A++V+ +M P+ VT S++ AC+ L + G+ IH
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+ LE D L +AL++MYSKCG+ ++AF++FN + +K++ SWT+MIS +G+ A+
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
F +M + GLKPD ++ A+LSAC H GL+DEG +F +M Y I+P +EHY CM+D+L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 350 GRAGLIEEAYHIIRNMP-TEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
GRAG + EAY II+ P T NA +L + AC H + L D + +LL++ P+ +
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLE-HSLGDRIARLLVENYPDDAST 616
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
Y++ ++ + +WD A + + + + GL K PGCSW++++D
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 205/384 (53%), Gaps = 9/384 (2%)
Query: 22 LHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSL--FNNLPVTPPLFAYNTLIRAYAKT 79
+HTL +K+ + + S + +L F SL F+ +P + ++NT+I + ++
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNL-FENSLQVFDEMP-ERDVASWNTVISCFYQS 186
Query: 80 SCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIG 139
+ ++++LF M +G P++ + + AC R L + G +H K G + D+Y+
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 140 NTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANES 199
+ L+ MY C ++VA+ VF++MP + +V+W+SMI G+VA +++ +RM +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 200 PNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKV 259
P+ TL S++ AC+ N+ G+ IH Y + + + D+ + +L+++Y KCG A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 260 FNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLV 319
F+ ++ +SW +MIS G A+ ++ +M+ G+KPD ++F+++L ACS L +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 320 DEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
++GK ++ ++ ++DM + G +EA+ I ++P + + V +
Sbjct: 427 EKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMIS 484
Query: 380 ACRNHGQ---VLYLDDNLGKLLLK 400
A +HGQ LY D + K LK
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLK 508
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 13 SKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFT-RSLFNNLPVTPPLFAYNT 71
+K++ + +H L L + + I + H + R +F N + ++ +N+
Sbjct: 17 TKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNS 76
Query: 72 LIRAYAKTSCSIESIKLFDEMLKTGL-RPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKV 130
L+ Y+K S +++++F +L + PD+FT+P V+KA G +G +H+L+ K
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 131 GLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVF 190
G D + ++L+ MYA + + VF+EMP RDV SW+++I+ F AL++F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 191 HRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKC 250
RM+ + PNSV+L +SAC+ L+ + G+ IH V G ELD + +ALV+MY KC
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 251 GHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAIL 310
+E A +VF M K+L +W MI G G + + +MI G +P + ++IL
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 311 SACSH 315
ACS
Sbjct: 317 MACSR 321
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 184 SDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA--VVNGLEL--DVAL 239
+++ K R+KL ++ ++ L V C SLINV H A V ++ DV +
Sbjct: 14 TNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYI 73
Query: 240 GTALVEMYSKCGHVEKAFKVFNLMREKNL---QSWTI--MISGLADNGRGNYAISLFAKM 294
+L+ YSK +VF + ++ S+T +I GR + +
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 295 IQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGL 354
+++G D + S+++ + L + FDEM + + + ++ ++G
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-----ERDVASWNTVISCFYQSGE 188
Query: 355 IEEAYHIIRNMPT---EPNAVILRSFLGACRNHGQVLYLD 391
E+A + M + EPN+V L + AC ++L+L+
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISAC---SRLLWLE 225
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 240/439 (54%), Gaps = 8/439 (1%)
Query: 19 LHQLHTLFLKTSLDHNTCIISRFILTSLS--ISLHFTRSLFNNLPVTPPLFAYNTLIRAY 76
+ ++H L K D + C + ++TS S +S+ + +F+ LP +N L+ Y
Sbjct: 179 VKKVHGLAFKLGFDSD-CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 77 AKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDK 136
++ +++ +F +M + G+ T V+ A I G S+H L K G SD
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 137 YIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLA 196
+ N L+ MY K ++ A ++FE M RD+ +W+S++ C L +F RM +
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 197 NESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL----ELDVALGTALVEMYSKCGH 252
P+ VTL +++ C L ++R G IH Y +V+GL + + +L++MY KCG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 253 VEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSA 312
+ A VF+ MR K+ SW IMI+G G A+ +F+ M + G+KPD I+F +L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 313 CSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAV 372
CSH G ++EG+N+ +M VYNI PT +HY C++DMLGRA +EEAY + + P N V
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 373 ILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAI 432
+ RS L +CR HG L GK L +LEPE YVL ++V +G ++ ++ A+
Sbjct: 538 VWRSILSSCRLHGNK-DLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
Query: 433 NQKGLNKVPGCSWVKVNDG 451
Q+ + K PGCSW+ + +G
Sbjct: 597 RQQNVKKTPGCSWIVLKNG 615
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 166/310 (53%), Gaps = 5/310 (1%)
Query: 66 LFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHS 125
+F YN LI + +++++ + EM G+ PD +T+P ++K L + VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR-DVVSWSSMIAGFVACDSPS 184
L FK+G DSD Y+G+ L+ Y+ ++ A+ VF+E+P R D V W++++ G+
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 185 DALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALV 244
DAL VF +M+ + T+ S++SA T ++ G SIH AV G D+ + AL+
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 245 EMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSI 304
+MY K +E+A +F M E++L +W ++ G + ++LF +M+ +G++PD +
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 305 SFSAILSACSHLGLVDEGKNYFDEM--ARVYNIKPTMEH-YGCMVDMLGRAGLIEEAYHI 361
+ + +L C L + +G+ M + + N K + E + ++DM + G + +A +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 362 IRNMPTEPNA 371
+M + +A
Sbjct: 425 FDSMRVKDSA 434
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 15/312 (4%)
Query: 60 LPVTPPLFAY----NTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
LP P LFA + L Y+ S IE E K + T ++ C +
Sbjct: 21 LPRNPDLFAAIKPSSALASLYSTVSGQIE------ENPKRYEHHNVATCIATLQRCAQRK 74
Query: 116 LIGIGGSVHSLIFKVG-LDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMI 174
G +H + + G LD G +L+ MYA C + A VF RDV ++++I
Sbjct: 75 DYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALI 133
Query: 175 AGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLE 234
+GFV SP DA++ + M+ P+ T SL+ ++ + + +H A G +
Sbjct: 134 SGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFD 192
Query: 235 LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQS-WTIMISGLADNGRGNYAISLFAK 293
D +G+ LV YSK VE A KVF+ + +++ W +++G + R A+ +F+K
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
M + G+ + +++LSA + G +D G++ +A + ++DM G++
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRS-IHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 354 LIEEAYHIIRNM 365
+EEA I M
Sbjct: 312 WLEEANSIFEAM 323
>sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protein At5g61800
OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1
Length = 499
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 255/493 (51%), Gaps = 60/493 (12%)
Query: 9 LIQLSKTVHHLHQLHTLFLKT-----SLDHNTCIIS-RFILTSLSIS-------LHFTRS 55
L++L +T+ HLHQ H F+ + N+ + F +TS+S S + + S
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 56 LFNNLPVTPPLFAYNTLIR-AYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKAC--- 111
+F + P F +NT+IR S+ S + F EM + + PD T+PFV KAC
Sbjct: 70 VFRFI-TNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAK 128
Query: 112 --GRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYA---------------------- 147
G L+ ++H + GL SD + NTL+R+Y+
Sbjct: 129 KNGDLTLVK---TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 148 ---------ACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANE 198
+EI A+ +F+ MP+RD+VSW+S+I+G+ + +A+K+F M
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 199 SPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFK 258
P++V +VS +SAC + + G++IH Y L +D L T LV+ Y+KCG ++ A +
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 259 VFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGL 318
+F L +K L +W MI+GLA +G G + F KM+ +G+KPD ++F ++L CSH GL
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 319 VDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE----PNAVIL 374
VDE +N FD+M +Y++ M+HYGCM D+LGRAGLIEEA +I MP + +
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 375 RSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAELMVAINQ 434
LG CR HG + + + + L PE G Y + + + + W+ ++ I++
Sbjct: 426 SGLLGGCRIHGNI-EIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Query: 435 -KGLNKVPGCSWV 446
K + K G S V
Sbjct: 485 DKKVKKNVGFSKV 497
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 239/413 (57%), Gaps = 2/413 (0%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVV 108
SL R LF+ + + + ++N++I AY + E++ +F +ML G++P + + +
Sbjct: 286 SLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 109 KACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVV 168
AC + G +H L ++GLD + + N+L+ MY CKE+D A ++F ++ R +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 169 SWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYA 228
SW++MI GF P DAL F +M+ P++ T VS+++A L + IH
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 229 VVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAI 288
+ + L+ +V + TALV+MY+KCG + A +F++M E+++ +W MI G +G G A+
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 289 SLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDM 348
LF +M + +KP+ ++F +++SACSH GLV+ G F M Y+I+ +M+HYG MVD+
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 349 LGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGAN 408
LGRAG + EA+ I MP +P + + LGAC+ H V + + + L +L P+ G
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA-EKAAERLFELNPDDGGY 643
Query: 409 YVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSKETA 461
+VL A++ + W+ ++ V++ ++GL K PGCS V++ + S TA
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 149/255 (58%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
Y+T+++ +AK S ++++ F M + P + + +++K CG + +G +H L+
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D + L MYA C++++ A+ VF+ MP RD+VSW++++AG+ AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+ M N P+ +T+VS++ A ++L + G+ IH YA+ +G + V + TALV+MY+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E A ++F+ M E+N+ SW MI N A+ +F KM+ G+KP +S
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 309 ILSACSHLGLVDEGK 323
L AC+ LG ++ G+
Sbjct: 343 ALHACADLGDLERGR 357
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 184/369 (49%), Gaps = 17/369 (4%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
R +F+ +P L ++NT++ Y++ + ++++ M + L+P T V+ A
Sbjct: 190 RKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
LI +G +H + G DS I L+ MYA C ++ A+ +F+ M R+VVSW+SM
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I +V ++P +A+ +F +M P V+++ + AC L ++ G IH +V GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ +V++ +L+ MY KC V+ A +F ++ + L SW MI G A NGR A++ F++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV---YNIKPTMEHYGCMVDMLG 350
M +KPD+ ++ ++++A + L + K + R N+ T +VDM
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT----ALVDMYA 484
Query: 351 RAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYV 410
+ G I A +I +M +E + + + HG GK L+L E+ +
Sbjct: 485 KCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG--------FGKAALELFEEMQKGTI 535
Query: 411 LAASVSSLS 419
V+ LS
Sbjct: 536 KPNGVTFLS 544
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 126 LIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSD 185
L+FK GL + + L+ ++ +D A VFE + + V + +M+ GF
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 186 ALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVE 245
AL+ F RM+ + P L+ C +R G+ IH V +G LD+ T L
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSIS 305
MY+KC V +A KVF+ M E++L SW +++G + NG A+ + M + LKP I+
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 306 FSAILSACSHLGLVDEGKNY--------FDEMARVYNIKPTMEHYGCMVDMLGRAGLIEE 357
++L A S L L+ GK FD + + +VDM + G +E
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST---------ALVDMYAKCGSLET 289
Query: 358 AYHIIRNMPTEPNAVILRSFLGA 380
A + M E N V S + A
Sbjct: 290 ARQLFDGM-LERNVVSWNSMIDA 311
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 6 IETLIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLFNNLPVTP 64
I + +LS T HH +H + +++ LD N + + + + + ++ R +F+ +
Sbjct: 445 ITAIAELSIT-HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ER 502
Query: 65 PLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVH 124
+ +N +I Y +++LF+EM K ++P+ T+ V+ AC L+ G
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 125 SLI---FKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
++ + + L D Y ++ + ++ A +MPV+ V+
Sbjct: 563 YMMKENYSIELSMDHY--GAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/442 (33%), Positives = 236/442 (53%), Gaps = 14/442 (3%)
Query: 9 LIQLSKTVHHLHQLHTLFLKTSLDHNTCIISRFILTSLSISLHFTRSLFNNLPVTPPLFA 68
++ K V ++ ++ + NT I + S + R LF+ PV +F
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITG----YAQSGKIDEARQLFDESPVQD-VFT 283
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ ++ Y + E+ +LFD+M P+ + G + G + +F
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAG--YVQGERMEMAKELF 335
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
V + NT++ YA C +I AK +F++MP RD VSW++MIAG+ +AL+
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M+ N + S +S C ++ + G+ +H V G E +G AL+ MY
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG +E+A +F M K++ SW MI+G + +G G A+ F M + GLKPD + A
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
+LSACSH GLVD+G+ YF M + Y + P +HY CMVD+LGRAGL+E+A+++++NMP E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 369 PNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAEL 428
P+A I + LGA R HG L + + +EPE YVL +++ + SG W +L
Sbjct: 576 PDAAIWGTLLGASRVHGNT-ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 429 MVAINQKGLNKVPGCSWVKVND 450
V + KG+ KVPG SW+++ +
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQN 656
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 47/346 (13%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
RS+F+ +P + ++N L+ AY + S E+ LF L N
Sbjct: 177 RSVFDRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWN------------ 223
Query: 114 CLLIGIGGSVHSLIFKVGLDS----DKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
CLL G + + DS D NT++ YA +ID A+ +F+E PV+DV +
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSA-----CTSLINVRAGESI 224
W++M++G++ +A ++F +M NE + L V L +V ++
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 225 HSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRG 284
++ ++ Y++CG + +A +F+ M +++ SW MI+G + +G
Sbjct: 344 STW-------------NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 285 NYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGC 344
A+ LF +M + G + + SFS+ LS C+ + ++ GK + +K E GC
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL-----VKGGYET-GC 444
Query: 345 MVD-----MLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHG 385
V M + G IEEA + + M + + V + + HG
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG 489
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 158/366 (43%), Gaps = 43/366 (11%)
Query: 56 LFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCL 115
+F +P + +YN +I Y + + KLFDEM + L ++ ++K R
Sbjct: 86 VFKRMPRWSSV-SYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNR 140
Query: 116 LIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIA 175
+G +F++ + D NT+L YA +D A++VF+ MP ++ VSW+++++
Sbjct: 141 NLGKARE----LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 176 GFVACDSPSDALKVFH-RMKLANESPNS-----VTLVSLVSACTSL--INVRAGES---- 223
+V +A +F R A S N V +V A +NVR S
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTI 256
Query: 224 IHSYAVVNGLE-----------LDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 272
I YA ++ DV TA+V Y + VE+A ++F+ M E+N SW
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 273 IMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARV 332
M++G R A LF M + +++ +++ + G + E KN FD+M +
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 333 YNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDD 392
+ + M+ ++G EA + M E + SF A V+ L+
Sbjct: 373 DPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE- 426
Query: 393 NLGKLL 398
LGK L
Sbjct: 427 -LGKQL 431
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 18/256 (7%)
Query: 113 RCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSS 172
R I S + K G DSD N + Y + A VF+ MP VS++
Sbjct: 42 RATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG 100
Query: 173 MIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNG 232
MI+G++ A K+F M + +V + V N G++ + ++
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVR------NRNLGKARELFEIMP- 153
Query: 233 LELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFA 292
E DV ++ Y++ G V+ A VF+ M EKN SW ++S N + A LF
Sbjct: 154 -ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 293 KMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRA 352
L +S++ +L + E + +FD M N++ + + ++ ++
Sbjct: 213 SRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVS-WNTIITGYAQS 263
Query: 353 GLIEEAYHIIRNMPTE 368
G I+EA + P +
Sbjct: 264 GKIDEARQLFDESPVQ 279
>sp|Q9ZUT4|PP192_ARATH Pentatricopeptide repeat-containing protein At2g37320
OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1
Length = 500
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 220/383 (57%), Gaps = 6/383 (1%)
Query: 72 LIRAYAKTSCSIESIKLFDE---MLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
L R S +E + L D + + G D + V++CG G H L
Sbjct: 88 LSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLAL 147
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G SD Y+G++L+ +Y E++ A VFEEMP R+VVSW++MI+GF LK
Sbjct: 148 KGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
++ +M+ + PN T +L+SACT + G S+H + GL+ + + +L+ MY
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMI-QTGLKPDSISFS 307
KCG ++ AF++F+ K++ SW MI+G A +G AI LF M+ ++G KPD+I++
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYL 327
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
+LS+C H GLV EG+ +F+ MA + +KP + HY C+VD+LGR GL++EA +I NMP
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
+PN+VI S L +CR HG V + + L LEP+ A +V A++ + G W AA
Sbjct: 387 KPNSVIWGSLLFSCRVHGDV-WTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAAT 445
Query: 428 LMVAINQKGLNKVPGCSWVKVND 450
+ + KGL PGCSW+++N+
Sbjct: 446 VRKLMKDKGLKTNPGCSWIEINN 468
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 68 AYNTLIRAYAKTSCSIESIKLFDEML-KTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSL 126
++N++I YA+ ++++I+LF+ M+ K+G +PD TY V+ +C L+ G +L
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 127 IFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDA 186
+ + GL + + L+ + + A + E MP++
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK--------------------- 387
Query: 187 LKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD-VALGTALVE 245
PNSV SL+ +C +V G I + LE D A L
Sbjct: 388 -------------PNSVIWGSLLFSCRVHGDVWTG--IRAAEERLMLEPDCAATHVQLAN 432
Query: 246 MYSKCGHVEKAFKVFNLMREKNLQS 270
+Y+ G+ ++A V LM++K L++
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKT 457
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 229/401 (57%), Gaps = 2/401 (0%)
Query: 50 LHFTRSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVK 109
+ R +F+ + + L ++NT+I Y + E++ +F EM G + FT V+
Sbjct: 112 VELARQVFDGM-LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 170
Query: 110 ACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVS 169
ACG +H L K +D + Y+G LL +YA C I A VFE M + V+
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 170 WSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAV 229
WSSM+AG+V + +AL ++ R + + N TL S++ AC++L + G+ +H+
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 230 VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAIS 289
+G +V + ++ V+MY+KCG + +++ +F+ ++EKNL+ W +ISG A + R +
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 290 LFAKMIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDML 349
LF KM Q G+ P+ ++FS++LS C H GLV+EG+ +F M Y + P + HY CMVD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 350 GRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANY 409
GRAGL+ EAY +I+++P +P A I S L +CR + L L + + L +LEPE N+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN-LELAEVAAEKLFELEPENAGNH 469
Query: 410 VLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
VL +++ + + W+ A+ + + KV G SW+ + D
Sbjct: 470 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 15/333 (4%)
Query: 67 FAYNTLIRA-----YAKTSCSIESIKLFDEMLKTGLRPDNFTYPF--------VVKACGR 113
F N LIR + TS +I + + + P ++ F +++ C R
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
+ + H I ++ L+ D + N L+ Y+ C +++A+ VF+ M R +VSW++M
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
I + S+AL +F M+ + T+ S++SAC + + +H +V +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L++ +GTAL+++Y+KCG ++ A +VF M++K+ +W+ M++G N A+ L+ +
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 294 MIQTGLKPDSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAG 353
+ L+ + + S+++ ACS+L + EGK + + + VDM + G
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKCG 312
Query: 354 LIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQ 386
+ E+Y II + E N + + + H +
Sbjct: 313 SLRESY-IIFSEVQEKNLELWNTIISGFAKHAR 344
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 237/453 (52%), Gaps = 32/453 (7%)
Query: 10 IQLSKTVH----HLHQLHTLFLKTSL----DHNTCIISRFILTSLSISLHFTRSLFNNLP 61
+ LSK VH ++ + F+ T+L N C+ IL F R F+
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL--------FERHNFD--- 481
Query: 62 VTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGG 121
L A+N ++ Y ++ +++KLF M K G R D+FT V K CG I G
Sbjct: 482 ----LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 122 SVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACD 181
VH+ K G D D ++ + +L MY C ++ A+ F+ +PV D V+W++MI+G +
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 182 SPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGT 241
A VF +M+L P+ T+ +L A + L + G IH+ A+ D +GT
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 242 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKP 301
+LV+MY+KCG ++ A+ +F + N+ +W M+ GLA +G G + LF +M G+KP
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 302 DSISFSAILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHI 361
D ++F +LSACSH GLV E + M Y IKP +EHY C+ D LGRAGL+++A ++
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 362 IRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKL----LLKLEPELGANYVLAASVSS 417
I +M E +A + R+ L ACR G D GK LL+LEP + YVL +++ +
Sbjct: 778 IESMSMEASASMYRTLLAACRVQG-----DTETGKRVATKLLELEPLDSSAYVLLSNMYA 832
Query: 418 LSGNWDTAAELMVAINQKGLNKVPGCSWVKVND 450
+ WD + + K PG SW++V +
Sbjct: 833 AASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 183/371 (49%), Gaps = 10/371 (2%)
Query: 20 HQLHTLFLKTSLDHNTCIISRFILTSLSI-SLHFTRSLFNNLPVTPPLFAYNTLIRAYAK 78
Q+H + LK LD + + I + F R++F+N+ L ++N++I A+
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAGIAQ 393
Query: 79 TSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL-IGIGGSVHSLIFKVGLDSDKY 137
+E++ LF ++L+ GL+PD +T V+KA + + VH K+ SD +
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 138 IGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLAN 197
+ L+ Y+ + + A+ +FE D+V+W++M+AG+ LK+F M
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 198 ESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYSKCGHVEKAF 257
E + TL ++ C L + G+ +H+YA+ +G +LD+ + + +++MY KCG + A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 258 KVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLG 317
F+ + + +WT MISG +NG A +F++M G+ PD + + + A S L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 318 LVDEGKNYFDEMARVYNIKPTMEHY--GCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILR 375
+++G+ A + T + + +VDM + G I++AY + + + N
Sbjct: 633 ALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWN 688
Query: 376 SFLGACRNHGQ 386
+ L HG+
Sbjct: 689 AMLVGLAQHGE 699
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 86 IKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRM 145
+K F +M+++ + D T+ ++ + + +G VH + K+GLD + N+L+ M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 146 YAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
Y ++ A+ VF+ M RD++SW+S+IAG +A+ +F ++ P+ T+
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 206 VSLVSACTSLIN-VRAGESIHSYAV-VNGLELDVALGTALVEMYSKCGHVEKAFKVFNLM 263
S++ A +SL + + +H +A+ +N + D + TAL++ YS+ +++A +F
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALIDAYSRNRCMKEAEILFE-R 477
Query: 264 REKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEGK 323
+L +W M++G + G+ + LFA M + G + D + + + C L +++GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 324 NYFDEMARVYNIKPTMEH----YGCMVDMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLG 379
Y IK + ++DM + G + A ++P P+ V + +
Sbjct: 538 Q-----VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMIS 591
Query: 380 ACRNHGQ 386
C +G+
Sbjct: 592 GCIENGE 598
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 119 IGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFV 178
+G H+ I + ++++ N L+ MY+ C + A+ VF++MP RD+VSW+S++A +
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 179 -----ACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
++ A +F ++ + +TL ++ C V A ES H YA GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+ D + ALV +Y K G V++ +F M +++ W +M+ + G AI L +
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 294 MIQTGLKPDSISF 306
+GL P+ I+
Sbjct: 237 FHSSGLNPNEITL 249
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 54 RSLFNNLPVTPPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGR 113
+ LF +P + +N +++AY + E+I L +GL P+ T + + G
Sbjct: 200 KVLFEEMPYRDVVL-WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD 258
Query: 114 CLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSM 173
G V S F G D+ V +++ +
Sbjct: 259 ---DSDAGQVKS--FANGNDAS---------------------------SVSEIIFRNKG 286
Query: 174 IAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGL 233
++ ++ S LK F M ++ + VT + +++ + ++ G+ +H A+ GL
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 234 ELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAK 293
+L + + +L+ MY K A VF+ M E++L SW +I+G+A NG A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 294 MIQTGLKPDSISFSAILSACSHL 316
+++ GLKPD + +++L A S L
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSL 429
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 49 SLHFTRSLFNNLPVTPPLFAYNTLIRAYAKTS-CSIESIK----LFDEMLKTGLRPDNFT 103
SL + R +F+ +P L ++N+++ AYA++S C +E+I+ LF + + + T
Sbjct: 89 SLTYARRVFDKMP-DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 104 YPFVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMP 163
++K C + S H K+GLD D+++ L+ +Y ++ K +FEEMP
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 164 VRDVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTL 205
RDVV W+ M+ ++ +A+ + + +PN +TL
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 226/382 (59%), Gaps = 2/382 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+ +I Y I+S+++F ++K + P+ T ++ G L + +G +H I
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII 468
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
K G D+ IG ++ MYA C +++A +FE + RD+VSW+SMI D+PS A+
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F +M ++ + V++ + +SAC +L + G++IH + + + L DV + L++MY+
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ-TGLKPDSISFS 307
KCG+++ A VF M+EKN+ SW +I+ ++G+ ++ LF +M++ +G++PD I+F
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 308 AILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPT 367
I+S+C H+G VDEG +F M Y I+P EHY C+VD+ GRAG + EAY +++MP
Sbjct: 649 EIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Query: 368 EPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELGANYVLAASVSSLSGNWDTAAE 427
P+A + + LGACR H V L + L+ L+P YVL ++ + + W++ +
Sbjct: 709 PPDAGVWGTLLGACRLHKNV-ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTK 767
Query: 428 LMVAINQKGLNKVPGCSWVKVN 449
+ + ++ + K+PG SW+++N
Sbjct: 768 VRSLMKEREVQKIPGYSWIEIN 789
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 172/319 (53%), Gaps = 2/319 (0%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N +I Y ++ ES+ F EM+ +G+ PD T+ ++ + + + +H I
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
+ + D ++ + L+ Y C+ + +A+ +F + DVV +++MI+G++ D+L+
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
+F + SPN +TLVS++ L+ ++ G +H + + G + +G A+++MY+
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KCG + A+++F + ++++ SW MI+ A + + AI +F +M +G+ D +S SA
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE 368
LSAC++L GK M + +++ + ++DM + G ++ A ++ + M E
Sbjct: 548 ALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KE 605
Query: 369 PNAVILRSFLGACRNHGQV 387
N V S + AC NHG++
Sbjct: 606 KNIVSWNSIIAACGNHGKL 624
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 2 ISRHIETLIQLSKTVHHLHQ---LHTLFLKTSLDHNTCIISRFI-LTSLSISLHFTRSLF 57
I R + L+Q + L Q +H + S+ ++ R + + ++ S +F
Sbjct: 34 IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 58 NNLPVT-PPLFAYNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLL 116
L + + +N++I ++ + +++ + +ML G+ PD T+P +VKAC
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 117 IGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAG 176
+ + +G+D ++++ ++L++ Y +IDV +F+ + +D V W+ M+ G
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 177 FVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELD 236
+ C + +K F M++ SPN+VT ++S C S + + G +H VV+G++ +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 237 VALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQ 296
++ +L+ MYSKCG + A K+F +M + +W MISG +G +++ F +MI
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 297 TGLKPDSISFSAILSACSHL 316
+G+ PD+I+FS++L + S
Sbjct: 334 SGVLPDAITFSSLLPSVSKF 353
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 147/301 (48%), Gaps = 9/301 (2%)
Query: 69 YNTLIRAYAKTSCSIESIKLFDEMLKTGLRPDNFTYPFVVKACGRCLLIGIGGSVHSLIF 128
+N ++ YAK IK F M + P+ T+ V+ C LLI +G +H L+
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 129 KVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVRDVVSWSSMIAGFVACDSPSDALK 188
G+D + I N+LL MY+ C D A +F M D V+W+ MI+G+V ++L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 189 VFHRMKLANESPNSVTLVSLVSACTSLINVRAGESIHSYAVVNGLELDVALGTALVEMYS 248
F+ M + P+++T SL+ + + N+ + IH Y + + + LD+ L +AL++ Y
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 249 KCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGRGNYAISLFAKMIQTGLKPDSISFSA 308
KC V A +F+ ++ +T MISG NG ++ +F +++ + P+ I+ +
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 309 ILSACSHLGLVDEGKNYFDEMARVYNIKPTME---HYGC-MVDMLGRAGLIEEAYHIIRN 364
IL L + G+ + IK + + GC ++DM + G + AY I
Sbjct: 447 ILPVIGILLALKLGRELHG-----FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 365 M 365
+
Sbjct: 502 L 502
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 35/308 (11%)
Query: 106 FVVKACGRCLLIGIGGSVHSLIFKVGLDSDKYIGNTLLRMYAACKEIDVAKAVFEEMPVR 165
+++AC L+ G VH+ + + D Y +L MYA C +F + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 166 --DVVSWSSMIAGFVACDSPSDALKVFHRMKLANESPNSVTLVSLVSACTSLINVRAGES 223
+ W+S+I+ FV + AL + +M SP+ T LV AC +L N + +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 224 IHSYAVVNGLELDVALGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNGR 283
+ G++ + + ++L++ Y + G ++ K+F+ + +K+ W +M++G A G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 284 GNYAISLFAKMIQTGLKPDSISFSAILSACSHLGLVDEG------------------KN- 324
+ I F+ M + P++++F +LS C+ L+D G KN
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 325 ---------YFDEMARVYNI--KPTMEHYGCMVDMLGRAGLIEEAYHIIRNMPTE---PN 370
FD+ ++++ + + + CM+ ++GL+EE+ M + P+
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 371 AVILRSFL 378
A+ S L
Sbjct: 340 AITFSSLL 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,962,174
Number of Sequences: 539616
Number of extensions: 6605593
Number of successful extensions: 22307
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 15587
Number of HSP's gapped (non-prelim): 2193
length of query: 462
length of database: 191,569,459
effective HSP length: 121
effective length of query: 341
effective length of database: 126,275,923
effective search space: 43060089743
effective search space used: 43060089743
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)