BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012505
(462 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
S108a Mutant From P. Aeruginosa
Length = 463
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 175/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T +H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGAHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM
Length = 463
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGCHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate
pdb|2H5A|X Chain X, Complex Of The Enzyme PmmPGM WITH XYLOSE 1-Phosphate
Length = 463
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGXHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1P5G|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCJ|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCM|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
Length = 463
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGXHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS
AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound
Length = 462
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 69 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGXHNPPDYNGFKIVVA 121
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 122 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 169
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 170 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 221
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 222 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 281
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 282 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 335
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 336 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 395
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 396 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 426
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 427 VLVLRFEADTEEE 439
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate
Bound
Length = 462
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 69 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGDHNPPDYNGFKIVVA 121
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 122 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 169
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 170 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 221
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 222 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 281
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 282 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 335
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 336 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 395
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 396 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 426
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 427 VLVLRFEADTEEE 439
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH
ITS SUBSTRATE
pdb|3C04|A Chain A, Structure Of The P368g Mutant Of PmmPGM FROM P. AERUGINOSA
Length = 463
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 174/433 (40%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G+ TP ++ + + EG + +M+T H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGMVPTPVLYYAANVLEGKS-------GVMLTGXHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAMA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP++ +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPMK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVMWKTGHSLIKKKMKETGAL-----LAGEMSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFGSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
From P.aeruginosa
Length = 463
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 171/433 (39%), Gaps = 70/433 (16%)
Query: 8 RGITGAGLDVVQYGLASTPAMF-NSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTN 66
+G+ G V G TP ++ + + EG + + +T H P + NG K
Sbjct: 70 QGLVDCGCQVSDVGXVPTPVLYYAANVLEGKS-------GVXLTGXHNPPDYNGFKIVVA 122
Query: 67 AGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
L I+ + ER I K + G+ S+++VD + Y + + A
Sbjct: 123 GETLANEQIQALRER---IEKNDLASGVG--------SVEQVDILPRYFKQIRDDIAXA- 170
Query: 127 GDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTA 186
KP + +VVD +++E LG + E DG FPNH P+P
Sbjct: 171 ----KPXK---VVVDCGNGVAGVIAPQLIEALGCSVI-PLYCEVDGNFPNHHPDPGKPEN 222
Query: 187 MKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVT 246
+K +I V ADLG+ FD D DR V +TG + +RL+ L + V+ +PG I+
Sbjct: 223 LKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLXLFAKDVVSRNPGADIIF 282
Query: 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENH 306
D + L I GG+ +K G+ + + ++ LA E SGH KE
Sbjct: 283 DVKCTRRLIALI-SGYGGRPVXWKTGHSLIKKKXKETGAL-----LAGEXSGHVFFKERW 336
Query: 307 W-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDL------VDGLEEPGFAVELRLKIDQ 359
+ DDG Y +LL L +D+ + E+ FA+ L+ D
Sbjct: 337 FGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDA 396
Query: 360 NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDP 419
+GE + L+ VRV GW L+R S P
Sbjct: 397 Q-----------WGEGNITTLDG------------------VRVDYPKGWGLVRASNTTP 427
Query: 420 VLPLNIEAPSRED 432
VL L EA + E+
Sbjct: 428 VLVLRFEADTEEE 440
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|C Chain C, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|D Chain D, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
Length = 455
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 183/436 (41%), Gaps = 55/436 (12%)
Query: 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG 60
ML++A+ G+ G DV+ G+A TPA+ +T DG +ITASH P NG
Sbjct: 56 MLKEALISGLLSVGCDVIDVGIAPTPAVQWATK------HFNADGGAVITASHNPPEYNG 109
Query: 61 LKFFT-NAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLV 119
+K N GL K ER A + + F E + ++R D + Y +
Sbjct: 110 IKLLEPNGMGLKK-------EREAIVEELFFKEDFDRAKWYEIGEVRREDIIKPYIEAIK 162
Query: 120 KAVRRAAGDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAK--TSGSQFLEPDGMFPNH 177
V A KP +VVD +L LG K T +Q PDG FP
Sbjct: 163 SKVDVEAIKKRKPF----VVVDTSNGAGSLTLPYLLRELGCKVITVNAQ---PDGYFPAR 215
Query: 178 IPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237
P P ++ +K ++ V AD G+ D D DR+ +D G + ++ AL++ VL+
Sbjct: 216 NPEPNEEN-LKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLK 274
Query: 238 EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETS 297
E G +VT TS+ L I KK G K R K G ++ A+ N+ + E +
Sbjct: 275 EKGGGLLVTTVATSN-LLDDIAKKHGAKVMRTKVG-DLIVARALYENN----GTIGGEEN 328
Query: 298 GHGALKENHWLDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDLVDGLEEPGFAVELRLKI 357
G E+ DGA + K++ K ++L+D L + + ++ + +
Sbjct: 329 GGVIFPEHVLGRDGAMTVAKVVEIF--------AKSGKKFSELIDELPKY-YQIKTKRHV 379
Query: 358 DQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLH 417
+ + + N+V + + V+ ++ GW L+R S
Sbjct: 380 EGDRH----------------AIVNKVAEMARERGYTVDTTDGAKIIFEDGWVLVRASGT 423
Query: 418 DPVLPLNIEAPSREDA 433
+P++ + EA S+E A
Sbjct: 424 EPIIRIFSEAKSKEKA 439
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of
PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein
(Bth_i1489)from Burkholderia Thailandensis
Length = 485
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 168/392 (42%), Gaps = 58/392 (14%)
Query: 43 VDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTS 102
VD I++T SH P + NG K + I+ + +R D +F + S
Sbjct: 121 VDSCIVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVD--ARF---------ETGS 169
Query: 103 TSIKRVDYMSVYTSDLVKAVRRAAGDIE--KPLEGFHIVVDXXXXXXXXXXXKVLEPLGA 160
S ++ D Y V R GDI+ +PL+ +VVD ++ + LG
Sbjct: 170 GSYEQYDVADQY-------VERIVGDIKLTRPLK---LVVDAGNGVAGPLATRLFKALGC 219
Query: 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGH 220
+ F + DG FPNH P+P ++ +I + A++G FD D DR V G
Sbjct: 220 ELV-ELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQ 278
Query: 221 ELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEA 280
+ +R + L + VL +PG I+ D + L ++ +K GG+ +K G+ V
Sbjct: 279 IIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREK-GGEPLMWKTGHSLV---K 334
Query: 281 IRLNSIGEESHLAIETSGHGALKENHW-LDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTD 339
+L G + LA E SGH K+ + DDG Y +LL L +
Sbjct: 335 AKLRETG--APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADP---------SA 383
Query: 340 LVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAP--VNY 397
L++GL EL+LK+++ GE V L +++ +D K A V
Sbjct: 384 LLNGLPNAVSTPELQLKLEE-------------GENV--KLIDKLRADAKFDGADEVVTI 428
Query: 398 EGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPS 429
+G +RV G+ L R S PV+ L EA S
Sbjct: 429 DG-LRVEYPDGFGLARSSNTTPVVVLRFEATS 459
>pdb|2F7L|A Chain A, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
pdb|2F7L|B Chain B, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
Length = 455
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 184/432 (42%), Gaps = 53/432 (12%)
Query: 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG 60
ML V G+ G++V G+A TPA+ + T G DG ++ITASH P NG
Sbjct: 52 MLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVKTLG------YDGGVVITASHNPAPYNG 105
Query: 61 LKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQT-STSIKRVD-YMSVYTSDL 118
+K G I+ E+ +I F E +E + +T +KR D +S Y + +
Sbjct: 106 IKVVDKDG------IEIRREKENEIEDLFFTERFNTIEWSSLTTEVKREDRVISTYVNGI 159
Query: 119 VKAVRRAAGDIEK-PLEGFHIVVDXXXXXXXXXXXKVLEPLGAKT-SGSQFLEPDGMFPN 176
+ V DIEK + + +++D V LG K + + L+P +F
Sbjct: 160 LSHV-----DIEKIKKKNYKVLIDPANSVGALSTPLVARALGCKIYTINGNLDP--LFSA 212
Query: 177 HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236
P P + +K + V K DLG+ D D DR+ +DS G +R L+S
Sbjct: 213 RQPEPTFDS-LKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWAS 271
Query: 237 EEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLA-IE 295
++P + VT+ ++ +E+ L + + +D A + + +E+ LA E
Sbjct: 272 VKNPKA--IKKIVTAVSSSSLVEEYLSKYNIQVDWTKVGSVDIA---HKVADENALAGFE 326
Query: 296 TSGHGALKENHWLDDGAYLMVKLLNKLXXXXXXXXXXXXKVLTDLVDGLEEPGFAVELRL 355
+G + ++ DGA +L L +L D L P + + ++
Sbjct: 327 ENGGFMYPPHQYVRDGAMSFALMLELLANENVSS--------AELFDRL--PKYYL-VKT 375
Query: 356 KIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLS 415
K+ DLK G + E K LE S K + +G V++ G WFL+R S
Sbjct: 376 KV-----DLKPGLMVE--EIYKKILEVYSTSSVK----AITIDG-VKIIGKDFWFLVRKS 423
Query: 416 LHDPVLPLNIEA 427
+P++ + EA
Sbjct: 424 GTEPIIRIMAEA 435
>pdb|3PDK|A Chain A, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
pdb|3PDK|B Chain B, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
Length = 469
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 147/322 (45%), Gaps = 28/322 (8%)
Query: 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG 60
ML+ A+ G+ G +V++ G+ STP + + LT+ +MI+ASH P NG
Sbjct: 76 MLEGALVAGLLSTGAEVMRLGVISTPGV--AYLTKA----LDAQAGVMISASHNPVQDNG 129
Query: 61 LKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVK 120
+KFF + G K E+ A+I + + + + L + T T++ +V S Y K
Sbjct: 130 IKFFGSDG------FKLTDEQEAEI-EALLDKEVDELPRPTGTNLGQV---SDYFEGGQK 179
Query: 121 AVRRAAGDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIPN 180
++ +E+ G HI +D + L A S + P+GM +I +
Sbjct: 180 YLQYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADIS-TMGTSPNGM---NIND 235
Query: 181 PEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE--E 238
T + + + V + AD+G+ FD D DR AVD G+ ++ ++++ + + + E +
Sbjct: 236 GVGSTHPEVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQ 295
Query: 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSG 298
T+V+ +++ G +E G + G + V++E R +L E SG
Sbjct: 296 LKHNTVVSTVMSNLGFYKALEAN-GITSDKTAVGDRYVMEEMKRGG-----YNLGGEQSG 349
Query: 299 HGALKENHWLDDGAYLMVKLLN 320
H L + DG ++L+N
Sbjct: 350 HIILLDYITTGDGMLSALQLVN 371
>pdb|3I3W|A Chain A, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
pdb|3I3W|B Chain B, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
Length = 443
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 30/236 (12%)
Query: 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG 60
L+ A+ G+ AG+DV+ G+ TP + T+ A +ITA H + NG
Sbjct: 56 FLKFALVSGLNAAGIDVLDLGVVPTPVVAFXTVKHRAA------AGFVITAXHNKFTDNG 109
Query: 61 LKFFTNAGGLGKPDIKDILERAAD---IYK-QFMVEGLTNLEKQTSTSIKRVDYMSVYTS 116
+K F++ G +++ +E D IY+ QF L I+ S+Y S
Sbjct: 110 IKLFSSNGFKLDDALEEEVEDXIDGDFIYQPQFKFGSYKILANAIDEYIE-----SIY-S 163
Query: 117 DLVKAVRRAAGDIEKPLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPN 176
K V +VVD +L+ G S PDG+
Sbjct: 164 RFAKFVNYKG----------KVVVDCAHGAASHNFEALLDKFGINYV-SIASNPDGL--- 209
Query: 177 HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMS 232
+I T + I +AV + KADLGI D D DR VD G E++ + ++ +++
Sbjct: 210 NINVGCGATCVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILA 265
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 20/256 (7%)
Query: 47 IMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLE-KQTSTSI 105
+++T SH P G K+ GG I +E A+ Q ++G+ L ++
Sbjct: 125 VLLTPSHNPPEDGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVKRLPLREALARA 184
Query: 106 KRVDYMSVYTSDLVKAVR----RAAG---DIEKPLEGFHIVVDXXXXXXXXXXXKVLEPL 158
K DY +Y + +AV RA+G ++ PL G + V +V+ P
Sbjct: 185 KPFDYAGLYVEKVAEAVDLEAIRASGLRIGVD-PLGGASLRVWERLAESHGLPLEVVNPT 243
Query: 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDST 218
T + DG +P AM ++ L ++ DL I D D DR V
Sbjct: 244 LDPTFRFMPKDHDGKIRMDCSSP---YAMAGLL--ALKDRFDLAIGNDPDADRHGIVTPR 298
Query: 219 GHELNRNRLI--ALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNV 276
G +N N + AL PG + +VTS L + + LG + + G+K+
Sbjct: 299 G-LMNPNHYLAAALHHLYTTRSWPGAKVGKTAVTS-ALLDRVAQALGREVYETPVGFKHF 356
Query: 277 IDEAIR--LNSIGEES 290
+ + L GEES
Sbjct: 357 VAGLLEGWLGFAGEES 372
>pdb|3OLP|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Multiple Human
Pathogens
pdb|3OLP|B Chain B, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Multiple Human
Pathogens
Length = 570
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 107/282 (37%), Gaps = 26/282 (9%)
Query: 14 GLDVV---QYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGL 70
G+DV+ G TPA+ N+ L DG I+IT SH P G+K+ GG
Sbjct: 130 GVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNPPEDGGIKYNPPNGGP 188
Query: 71 GKPDIKDILERAADIYKQFMVEGLTNLE---KQTSTSIKRVDYMSVYTSDLVKAVRRAAG 127
++ ++E A+ ++G+ + S +K VD + + L V AA
Sbjct: 189 ADTNVTKVVEDRANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAA- 247
Query: 128 DIEK--------PLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIP 179
I+K PL G I ++ +T L+ DG
Sbjct: 248 -IQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGAIRMDC- 305
Query: 180 NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239
+ AM ++ L +K DL D D DR V G +N N +A+ + +
Sbjct: 306 --SSECAMAGLL--ALRDKFDLAFANDPDYDRHGIVTPAG-LMNPNHYLAVAINYLFQHR 360
Query: 240 P--GTTI-VTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVID 278
P G + V ++ S + + LG K G+K +D
Sbjct: 361 PLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVD 402
>pdb|3NA5|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Several Human
Pathogens.
pdb|3NA5|B Chain B, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Several Human
Pathogens
Length = 570
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 107/282 (37%), Gaps = 26/282 (9%)
Query: 14 GLDVV---QYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGL 70
G+DV+ G TPA+ N+ L DG I+IT SH P G+K+ GG
Sbjct: 130 GVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNPPEDGGIKYNPPNGGP 188
Query: 71 GKPDIKDILERAADIYKQFMVEGLTNLE---KQTSTSIKRVDYMSVYTSDLVKAVRRAAG 127
++ ++E A+ ++G+ + S +K VD + + L V AA
Sbjct: 189 ADTNVTKVVEDRANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAA- 247
Query: 128 DIEK--------PLEGFHIVVDXXXXXXXXXXXKVLEPLGAKTSGSQFLEPDGMFPNHIP 179
I+K PL G I ++ +T L+ DG
Sbjct: 248 -IQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGAIRMDC- 305
Query: 180 NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239
+ AM ++ L +K DL D D DR V G +N N +A+ + +
Sbjct: 306 --SSEXAMAGLL--ALRDKFDLAFANDPDYDRHGIVTPAG-LMNPNHYLAVAINYLFQHR 360
Query: 240 P--GTTI-VTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVID 278
P G + V ++ S + + LG K G+K +D
Sbjct: 361 PLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVD 402
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1LXT|B Chain B, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1C47|A Chain A, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C47|B Chain B, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C4G|A Chain A, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
pdb|1C4G|B Chain B, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
Length = 561
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 33/301 (10%)
Query: 15 LDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG---LKFFTNAGGLG 71
L + Q G+ STPA+ + + + A G I++TASH P NG +KF + GG
Sbjct: 85 LVIGQNGILSTPAV-SCIIRKIKAI-----GGIILTASHNPGGPNGDFGIKFNISNGGPA 138
Query: 72 KPDIKDILERAADIYKQFMVE-----GLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
I D + + + +++ + L L KQ + +V D V+A
Sbjct: 139 PEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATML 198
Query: 127 GDI------EKPLEG---FHIVVDXXXXXXXXXXXKVL-EPLGAKTSGSQFLEPDGMFPN 176
+I ++ L G I +D K+L E LGA + + P F
Sbjct: 199 RNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGG 258
Query: 177 HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236
H P+P + T +++ + + D G FD D DR+ + G +N + +A+++A +
Sbjct: 259 HHPDP-NLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIF 317
Query: 237 E----EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYK---NVIDEAIRLNSIGEE 289
+ G S+ + G + + G+K N++D A +L+ GEE
Sbjct: 318 SIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMD-ASKLSLCGEE 376
Query: 290 S 290
S
Sbjct: 377 S 377
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1JDY|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|3PMG|A Chain A, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
pdb|3PMG|B Chain B, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
Length = 561
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 33/301 (10%)
Query: 15 LDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNG---LKFFTNAGGLG 71
L + Q G+ STPA+ + + + A G I++TA H P NG +KF + GG
Sbjct: 85 LVIGQNGILSTPAV-SCIIRKIKAI-----GGIILTAXHNPGGPNGDFGIKFNISNGGPA 138
Query: 72 KPDIKDILERAADIYKQFMVE-----GLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
I D + + + +++ + L L KQ + +V D V+A
Sbjct: 139 PEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATML 198
Query: 127 GDI------EKPLEG---FHIVVDXXXXXXXXXXXKVL-EPLGAKTSGSQFLEPDGMFPN 176
+I ++ L G I +D K+L E LGA + + P F
Sbjct: 199 RNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGG 258
Query: 177 HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236
H P+P + T +++ + + D G FD D DR+ + G +N + +A+++A +
Sbjct: 259 HHPDP-NLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIF 317
Query: 237 E----EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYK---NVIDEAIRLNSIGEE 289
+ G S+ + G + + G+K N++D A +L+ GEE
Sbjct: 318 SIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMD-ASKLSLCGEE 376
Query: 290 S 290
S
Sbjct: 377 S 377
>pdb|2FUV|A Chain A, Phosphoglucomutase From Salmonella Typhimurium.
pdb|2FUV|B Chain B, Phosphoglucomutase From Salmonella Typhimurium
Length = 549
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 14 GLDVV---QYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGL 70
G+DV+ G TPA+ N+ L DG I+IT SH P G+K+ GG
Sbjct: 109 GVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADG-IVITPSHNPPEDGGIKYNPPNGGP 167
Query: 71 GKPDIKDILERAADIYKQFMVEGLTNLE---KQTSTSIKRVDYMSVYTSDLVKAVRRAA 126
++ ++E A+ ++G+ + S +K VD + + L V AA
Sbjct: 168 ADTNVTKVVEDRANALLAGGLQGVKRISLDAAXASGHVKAVDLVQPFVEGLADIVDXAA 226
>pdb|4HJH|A Chain A, Iodide Sad Phased Crystal Structure Of A
Phosphoglucomutase From Brucella Melitensis Complexed
With Glucose-6-Phosphate
pdb|4HJH|B Chain B, Iodide Sad Phased Crystal Structure Of A
Phosphoglucomutase From Brucella Melitensis Complexed
With Glucose-6-Phosphate
Length = 481
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 10 ITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGG 69
I AG V G+ TPA+ + P +IM+T H+P +RNGLKF+ G
Sbjct: 73 IEDAGFTPVNCGVLPTPALSYYAMGAK----AP---SIMVTGXHIPDDRNGLKFYRRDGE 125
Query: 70 LGKPD 74
+ K D
Sbjct: 126 IDKDD 130
>pdb|2Z1G|A Chain A, Crystal Structure Of E.Coli Rnase Hi Surface Charged
Mutant(Q4rT40EQ72HQ76KQ80ET92KQ105K)
Length = 155
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 217 STGHELNRNRLIALMSAIV----LEEHPGTTIVTDS-VTSDGLTTFIEKKLGGKHHRFKR 271
S G+E N + LM+AIV L+EH + TDS G+T +I H+ KR
Sbjct: 36 SAGYERTTNNRMELMAAIVALEALKEHCEVILSTDSHYVRKGITEWI-------HNWKKR 88
Query: 272 GYKNV-------IDEAIRLNSIGEESHLAIE-TSGHGALKENHWLDD 310
G+K +D RL++ + + E GH EN D+
Sbjct: 89 GWKKADKKPVKNVDLWKRLDAALGQHQIKWEWVKGHAGHPENERCDE 135
>pdb|2Z1J|A Chain A, Crystal Structure Of E.Coli Rnase Hi Surface Charged
Mutant(Q4rT40EQ72HQ76KQ80ET92KQ105KQ113RQ115KN143K
T145K)
Length = 155
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 217 STGHELNRNRLIALMSAIV----LEEHPGTTIVTDS-VTSDGLTTFIEKKLGGKHHRFKR 271
S G+E N + LM+AIV L+EH + TDS G+T +I H+ KR
Sbjct: 36 SAGYERTTNNRMELMAAIVALEALKEHCEVILSTDSHYVRKGITEWI-------HNWKKR 88
Query: 272 GYKNV-------IDEAIRLNSIGEESHLAIE-TSGHGALKENHWLDD 310
G+K +D RL++ + E GH EN D+
Sbjct: 89 GWKKADKKPVKNVDLWKRLDAALGRHKIKWEWVKGHAGHPENERCDE 135
>pdb|2Z1I|A Chain A, Crystal Structure Of E.Coli Rnase Hi Surface Charged
Mutant(Q4rT40EQ72HQ76KQ80ET92KQ105KQ113RQ115K)
pdb|2Z1I|B Chain B, Crystal Structure Of E.Coli Rnase Hi Surface Charged
Mutant(Q4rT40EQ72HQ76KQ80ET92KQ105KQ113RQ115K)
Length = 155
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 12/63 (19%)
Query: 217 STGHELNRNRLIALMSAIV----LEEHPGTTIVTDS-VTSDGLTTFIEKKLGGKHHRFKR 271
S G+E N + LM+AIV L+EH + TDS G+T +I H+ KR
Sbjct: 36 SAGYERTTNNRMELMAAIVALEALKEHCEVILSTDSHYVRKGITEWI-------HNWKKR 88
Query: 272 GYK 274
G+K
Sbjct: 89 GWK 91
>pdb|3DKX|A Chain A, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Trigonal Form, To 2.7
Ang Resolution
pdb|3DKX|B Chain B, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Trigonal Form, To 2.7
Ang Resolution
pdb|3DKX|C Chain C, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Trigonal Form, To 2.7
Ang Resolution
pdb|3DKY|A Chain A, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
pdb|3DKY|B Chain B, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
pdb|3DKY|C Chain C, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
pdb|3DKY|D Chain D, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
pdb|3DKY|E Chain E, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
pdb|3DKY|F Chain F, Crystal Structure Of The Replication Initiator Protein
Encoded On Plasmid Pmv158 (Repb), Tetragonal Form, To
3.6 Ang Resolution
Length = 210
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 197 NKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE-------------EHPGTT 243
+KAD+ +I + D+DR +D N +++L+ A L+ E G T
Sbjct: 116 DKADIKLINNFDIDRYVTLDVEEKTELFNVVVSLIRAYTLQNIFDLYDFIDENGETYGLT 175
Query: 244 IVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKN 275
I + G T F++ G + R KRG KN
Sbjct: 176 INLVNEVIAGKTGFMKLLFDGAYQRSKRGTKN 207
>pdb|3J0E|H Chain H, Models For The T. Thermophilus Ribosome Recycling Factor
And The E. Coli Elongation Factor G Bound To The E. Coli
Post-Termination Complex
Length = 702
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 410 FLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPAL 450
L R+ +PV+ + +E ++ D K+GLA+ KE P+
Sbjct: 404 ILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSF 444
>pdb|2RDO|7 Chain 7, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
Length = 704
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 410 FLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPAL 450
L R+ +PV+ + +E ++ D K+GLA+ KE P+
Sbjct: 405 ILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSF 445
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,216,809
Number of Sequences: 62578
Number of extensions: 540684
Number of successful extensions: 1190
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1142
Number of HSP's gapped (non-prelim): 46
length of query: 462
length of database: 14,973,337
effective HSP length: 102
effective length of query: 360
effective length of database: 8,590,381
effective search space: 3092537160
effective search space used: 3092537160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)