Query 012505
Match_columns 462
No_of_seqs 147 out of 1435
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 03:20:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012505.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012505hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02371 phosphoglucosamine mu 100.0 4.2E-85 9.2E-90 690.9 49.2 442 1-460 130-582 (583)
2 cd03089 PMM_PGM The phosphoman 100.0 1.7E-81 3.7E-86 648.4 44.6 392 1-444 51-443 (443)
3 PRK14321 glmM phosphoglucosami 100.0 1E-79 2.2E-84 635.0 41.4 396 1-449 51-447 (449)
4 PRK09542 manB phosphomannomuta 100.0 1.3E-78 2.7E-83 626.1 43.6 392 1-446 50-444 (445)
5 cd05803 PGM_like4 This PGM-lik 100.0 1.5E-78 3.4E-83 626.3 41.8 391 1-440 52-444 (445)
6 cd05800 PGM_like2 This PGM-lik 100.0 1.1E-78 2.5E-83 630.8 40.5 401 1-443 54-460 (461)
7 PRK15414 phosphomannomutase Cp 100.0 2.7E-78 5.9E-83 625.0 40.9 396 1-446 53-456 (456)
8 cd05805 MPG1_transferase GTP-m 100.0 3.1E-78 6.7E-83 623.8 40.9 392 1-444 49-441 (441)
9 cd03087 PGM_like1 This archaea 100.0 1.7E-77 3.6E-82 618.4 41.4 391 1-444 48-439 (439)
10 COG1109 {ManB} Phosphomannomut 100.0 6E-76 1.3E-80 608.3 43.6 401 1-449 59-462 (464)
11 PRK14317 glmM phosphoglucosami 100.0 6.8E-75 1.5E-79 601.6 40.2 390 1-449 70-465 (465)
12 TIGR01132 pgm phosphoglucomuta 100.0 9.4E-75 2E-79 609.3 41.2 412 1-446 92-540 (543)
13 PRK10887 glmM phosphoglucosami 100.0 1.5E-74 3.3E-79 595.9 41.3 386 1-446 54-441 (443)
14 PRK07564 phosphoglucomutase; V 100.0 1.1E-74 2.4E-79 608.7 39.7 409 1-448 91-541 (543)
15 cd05801 PGM_like3 This bacteri 100.0 1E-74 2.2E-79 606.9 39.1 406 1-443 74-521 (522)
16 PRK14315 glmM phosphoglucosami 100.0 1.9E-74 4.1E-79 596.0 38.7 383 1-446 57-445 (448)
17 PRK14324 glmM phosphoglucosami 100.0 4.5E-74 9.7E-79 592.0 39.6 389 1-449 54-445 (446)
18 cd03085 PGM1 Phosphoglucomutas 100.0 1.3E-74 2.8E-79 605.6 35.5 427 1-460 64-540 (548)
19 cd05799 PGM2 This CD includes 100.0 1.1E-73 2.5E-78 596.9 41.7 388 1-429 60-471 (487)
20 TIGR01455 glmM phosphoglucosam 100.0 2E-73 4.3E-78 588.0 40.5 386 1-445 53-442 (443)
21 PRK14316 glmM phosphoglucosami 100.0 1.4E-73 2.9E-78 590.4 36.4 385 1-451 55-448 (448)
22 PRK14320 glmM phosphoglucosami 100.0 3.1E-73 6.8E-78 586.1 38.5 384 1-447 56-441 (443)
23 cd05802 GlmM GlmM is a bacteri 100.0 3.1E-73 6.8E-78 585.4 38.4 376 1-440 52-433 (434)
24 PRK14323 glmM phosphoglucosami 100.0 1.9E-73 4.2E-78 587.6 36.6 380 1-447 57-438 (440)
25 PRK14314 glmM phosphoglucosami 100.0 6.5E-73 1.4E-77 584.9 40.0 388 1-447 57-448 (450)
26 PRK14318 glmM phosphoglucosami 100.0 4.2E-73 9E-78 586.0 37.1 383 1-448 59-447 (448)
27 PTZ00150 phosphoglucomutase-2- 100.0 5.9E-73 1.3E-77 599.8 36.7 415 1-446 104-568 (584)
28 PRK14322 glmM phosphoglucosami 100.0 1E-71 2.3E-76 572.6 41.9 374 1-446 52-429 (429)
29 PLN02307 phosphoglucomutase 100.0 6.8E-72 1.5E-76 585.7 41.0 432 1-460 76-571 (579)
30 cd03088 ManB ManB is a bacteri 100.0 1.4E-71 3.1E-76 575.9 39.5 389 1-439 51-457 (459)
31 PRK14319 glmM phosphoglucosami 100.0 2.9E-70 6.3E-75 562.0 37.4 376 1-449 49-427 (430)
32 KOG1220 Phosphoglucomutase/pho 100.0 6E-65 1.3E-69 505.7 32.2 410 2-432 118-573 (607)
33 cd03084 phosphohexomutase The 100.0 1.3E-64 2.8E-69 508.8 35.1 338 25-444 16-355 (355)
34 cd03086 PGM3 PGM3 (phosphogluc 100.0 4.3E-57 9.3E-62 468.3 33.4 368 44-444 36-513 (513)
35 PLN02895 phosphoacetylglucosam 100.0 1.3E-50 2.9E-55 418.0 34.8 390 4-448 32-555 (562)
36 PTZ00302 N-acetylglucosamine-p 100.0 5E-51 1.1E-55 424.3 31.2 371 43-448 75-582 (585)
37 COG0033 Pgm Phosphoglucomutase 100.0 2.5E-45 5.5E-50 353.8 22.5 415 4-446 72-518 (524)
38 KOG0625 Phosphoglucomutase [Ca 100.0 9.6E-42 2.1E-46 325.4 27.8 428 4-460 72-550 (558)
39 KOG2537 Phosphoglucomutase/pho 99.9 2.3E-25 4.9E-30 219.4 15.8 291 111-447 186-538 (539)
40 PF02879 PGM_PMM_II: Phosphogl 99.9 1.8E-22 3.9E-27 166.7 7.3 102 112-219 1-104 (104)
41 PF02880 PGM_PMM_III: Phosphog 99.9 1.1E-21 2.4E-26 164.2 10.7 111 223-347 1-112 (113)
42 PF02878 PGM_PMM_I: Phosphoglu 99.8 1.5E-19 3.3E-24 156.7 5.7 77 1-83 55-131 (137)
43 PF00408 PGM_PMM_IV: Phosphogl 99.4 4.6E-13 1E-17 102.7 7.3 49 396-445 24-73 (73)
44 cd03086 PGM3 PGM3 (phosphogluc 96.8 0.001 2.2E-08 70.1 3.6 34 1-34 117-150 (513)
45 PLN02895 phosphoacetylglucosam 95.0 0.021 4.5E-07 60.5 3.9 34 2-35 143-176 (562)
46 PTZ00302 N-acetylglucosamine-p 94.9 0.021 4.6E-07 60.9 3.4 34 1-34 167-201 (585)
47 PF11576 DUF3236: Protein of u 69.8 15 0.00033 31.4 6.0 82 137-224 37-123 (154)
48 TIGR02133 RPI_actino ribose 5- 65.2 94 0.002 27.1 10.3 74 137-217 2-77 (148)
49 PRK08621 galactose-6-phosphate 60.1 32 0.0007 29.7 6.4 63 137-209 2-66 (142)
50 TIGR01118 lacA galactose-6-pho 58.4 40 0.00087 29.1 6.7 63 137-209 2-66 (141)
51 PRK08622 galactose-6-phosphate 55.1 56 0.0012 29.2 7.2 102 137-268 2-105 (171)
52 PRK12615 galactose-6-phosphate 54.4 57 0.0012 29.1 7.2 102 137-268 2-105 (171)
53 PF09981 DUF2218: Uncharacteri 53.9 1.1E+02 0.0023 24.1 8.0 70 373-448 10-79 (89)
54 PRK05571 ribose-5-phosphate is 53.3 62 0.0013 28.2 7.1 103 137-268 2-106 (148)
55 TIGR01120 rpiB ribose 5-phosph 51.4 59 0.0013 28.1 6.6 101 138-268 2-104 (143)
56 TIGR01119 lacB galactose-6-pho 50.2 71 0.0015 28.5 7.1 103 137-269 2-106 (171)
57 PRK12613 galactose-6-phosphate 50.0 62 0.0013 27.9 6.5 99 137-268 2-102 (141)
58 PTZ00215 ribose 5-phosphate is 48.8 86 0.0019 27.4 7.3 103 136-268 3-109 (151)
59 PF04028 DUF374: Domain of unk 48.5 1.1E+02 0.0024 23.1 7.0 59 134-207 10-68 (74)
60 PRK08673 3-deoxy-7-phosphohept 47.8 26 0.00057 34.9 4.5 61 134-196 261-327 (335)
61 PRK13398 3-deoxy-7-phosphohept 47.4 45 0.00096 32.2 5.9 61 134-196 195-261 (266)
62 PRK13396 3-deoxy-7-phosphohept 47.3 41 0.00088 33.8 5.7 61 134-196 270-336 (352)
63 TIGR01123 ilvE_II branched-cha 46.3 89 0.0019 30.7 8.0 73 191-279 167-248 (313)
64 PF02502 LacAB_rpiB: Ribose/Ga 44.4 38 0.00083 29.2 4.4 102 137-268 1-104 (140)
65 PRK12613 galactose-6-phosphate 44.1 35 0.00077 29.4 4.1 23 2-24 14-36 (141)
66 COG0860 AmiC N-acetylmuramoyl- 42.1 84 0.0018 29.6 6.7 64 133-209 40-122 (231)
67 PRK01964 4-oxalocrotonate taut 41.4 40 0.00086 24.4 3.6 35 419-453 2-37 (64)
68 TIGR00689 rpiB_lacA_lacB sugar 40.1 91 0.002 27.0 6.0 91 149-269 14-104 (144)
69 PF12909 DUF3832: Protein of u 39.2 52 0.0011 26.0 4.0 40 405-448 14-54 (89)
70 COG0124 HisS Histidyl-tRNA syn 38.6 7.1 0.00015 40.3 -1.2 29 400-428 66-95 (429)
71 KOG3189 Phosphomannomutase [Li 37.5 3.2E+02 0.0069 25.2 9.1 32 374-409 160-192 (252)
72 PF05991 NYN_YacP: YacP-like N 37.4 1.2E+02 0.0026 26.8 6.6 23 187-209 32-54 (166)
73 COG0698 RpiB Ribose 5-phosphat 36.8 1.6E+02 0.0034 25.8 7.0 66 137-209 2-69 (151)
74 cd02072 Glm_B12_BD B12 binding 35.6 40 0.00087 28.6 3.1 25 3-27 16-40 (128)
75 PRK05571 ribose-5-phosphate is 35.5 59 0.0013 28.3 4.2 21 2-22 14-34 (148)
76 PRK08621 galactose-6-phosphate 35.4 74 0.0016 27.5 4.7 21 2-22 14-34 (142)
77 TIGR01118 lacA galactose-6-pho 35.3 75 0.0016 27.4 4.7 21 2-22 14-34 (141)
78 cd00491 4Oxalocrotonate_Tautom 34.9 59 0.0013 22.7 3.5 32 419-450 1-33 (58)
79 PHA00689 hypothetical protein 34.6 29 0.00062 23.8 1.6 15 398-413 26-41 (62)
80 PLN02204 diacylglycerol kinase 33.1 2.4E+02 0.0053 30.5 9.0 84 110-210 140-230 (601)
81 PRK00745 4-oxalocrotonate taut 32.8 69 0.0015 22.8 3.7 33 419-451 2-35 (62)
82 COG2185 Sbm Methylmalonyl-CoA 32.6 42 0.00092 29.0 2.8 25 4-28 30-54 (143)
83 TIGR01501 MthylAspMutase methy 32.6 47 0.001 28.4 3.1 25 3-27 18-42 (134)
84 TIGR00689 rpiB_lacA_lacB sugar 32.6 69 0.0015 27.8 4.1 21 2-22 12-32 (144)
85 COG1979 Uncharacterized oxidor 32.5 1.3E+02 0.0029 29.8 6.4 62 136-207 30-94 (384)
86 PLN02958 diacylglycerol kinase 30.8 2.3E+02 0.0049 29.9 8.5 50 109-163 92-147 (481)
87 PRK00103 rRNA large subunit me 30.6 2.5E+02 0.0054 24.7 7.4 29 207-235 65-93 (157)
88 PRK13397 3-deoxy-7-phosphohept 30.2 1.1E+02 0.0023 29.2 5.4 60 134-198 183-248 (250)
89 TIGR01120 rpiB ribose 5-phosph 30.1 83 0.0018 27.2 4.2 21 2-22 13-33 (143)
90 PF06029 AlkA_N: AlkA N-termin 30.0 79 0.0017 26.2 4.0 47 407-457 45-93 (116)
91 TIGR01119 lacB galactose-6-pho 29.7 82 0.0018 28.1 4.2 21 2-22 14-34 (171)
92 COG2876 AroA 3-deoxy-D-arabino 29.7 1.1E+02 0.0024 29.3 5.3 63 132-195 211-278 (286)
93 PF13167 GTP-bdg_N: GTP-bindin 29.1 1.5E+02 0.0033 23.7 5.2 48 151-204 13-63 (95)
94 PRK13329 pantothenate kinase; 28.8 3.1E+02 0.0066 26.1 8.3 88 135-224 52-144 (249)
95 PF09413 DUF2007: Domain of un 28.7 50 0.0011 24.0 2.4 27 415-441 40-66 (67)
96 TIGR01361 DAHP_synth_Bsub phos 28.5 1.4E+02 0.0031 28.6 6.0 59 135-195 194-258 (260)
97 PF02502 LacAB_rpiB: Ribose/Ga 28.4 83 0.0018 27.1 3.9 49 2-52 13-66 (140)
98 PRK02220 4-oxalocrotonate taut 28.3 79 0.0017 22.4 3.3 34 419-452 2-36 (61)
99 PTZ00215 ribose 5-phosphate is 28.2 91 0.002 27.3 4.1 21 2-22 16-38 (151)
100 PF14492 EFG_II: Elongation Fa 27.9 1.1E+02 0.0025 23.0 4.2 33 418-450 3-35 (75)
101 COG0075 Serine-pyruvate aminot 27.5 3.9E+02 0.0084 27.3 9.1 104 137-268 82-188 (383)
102 PRK10319 N-acetylmuramoyl-l-al 26.9 2.5E+02 0.0053 27.4 7.4 62 135-209 56-136 (287)
103 TIGR02133 RPI_actino ribose 5- 26.8 1.2E+02 0.0027 26.3 4.8 21 2-22 14-34 (148)
104 PRK02289 4-oxalocrotonate taut 26.6 1E+02 0.0022 22.0 3.6 32 419-450 2-34 (60)
105 PRK08452 flagellar protein Fla 26.4 2.7E+02 0.0059 23.4 6.5 50 185-234 57-112 (124)
106 COG4019 Uncharacterized protei 26.4 2.4E+02 0.0051 23.8 5.9 82 137-224 38-124 (156)
107 KOG3852 Uncharacterized conser 26.4 3.3E+02 0.0073 26.7 7.8 94 5-123 86-179 (426)
108 cd02395 SF1_like-KH Splicing f 26.0 2.6E+02 0.0057 23.3 6.4 29 421-449 68-98 (120)
109 PRK13322 pantothenate kinase; 25.7 4.1E+02 0.0088 25.1 8.5 87 136-224 49-141 (246)
110 PF03668 ATP_bind_2: P-loop AT 25.3 1.9E+02 0.0042 28.1 6.2 26 138-163 4-29 (284)
111 COG0113 HemB Delta-aminolevuli 24.8 5.3E+02 0.012 25.4 8.9 106 137-246 46-168 (330)
112 PRK12457 2-dehydro-3-deoxyphos 24.8 2.4E+02 0.0051 27.4 6.6 60 134-194 190-265 (281)
113 COG1254 AcyP Acylphosphatases 24.7 1.4E+02 0.0029 23.8 4.2 32 407-442 33-64 (92)
114 PRK07738 flagellar protein Fla 24.5 3.1E+02 0.0067 22.9 6.4 51 184-234 49-105 (117)
115 PRK05198 2-dehydro-3-deoxyphos 24.0 2.4E+02 0.0051 27.1 6.4 61 134-195 182-258 (264)
116 PF14028 SpaB_C: SpaB C-termin 23.9 1.1E+02 0.0023 29.4 4.3 25 407-431 37-61 (283)
117 TIGR02883 spore_cwlD N-acetylm 23.7 2.3E+02 0.0049 25.5 6.2 71 137-209 2-94 (189)
118 PRK08868 flagellar protein Fla 23.1 3.3E+02 0.0072 23.6 6.5 52 184-235 74-131 (144)
119 PRK14644 hypothetical protein; 23.1 2E+02 0.0043 24.7 5.2 35 412-446 20-54 (136)
120 TIGR01362 KDO8P_synth 3-deoxy- 22.9 2.6E+02 0.0055 26.8 6.4 59 135-194 175-249 (258)
121 PRK08622 galactose-6-phosphate 22.9 1.3E+02 0.0028 26.9 4.1 21 2-22 14-34 (171)
122 TIGR00640 acid_CoA_mut_C methy 22.7 88 0.0019 26.6 3.0 25 3-27 19-43 (132)
123 PRK13324 pantothenate kinase; 22.2 6.9E+02 0.015 23.8 11.0 109 110-224 36-149 (258)
124 PRK12615 galactose-6-phosphate 21.9 1.4E+02 0.003 26.8 4.1 21 2-22 14-34 (171)
125 PLN03033 2-dehydro-3-deoxyphos 21.6 2.7E+02 0.006 27.0 6.3 59 134-193 188-267 (290)
126 PRK09273 hypothetical protein; 21.3 6.6E+02 0.014 23.3 9.1 103 149-279 20-124 (211)
127 cd02069 methionine_synthase_B1 21.2 1.8E+02 0.0039 26.9 5.1 31 3-33 105-136 (213)
128 TIGR01006 polys_exp_MPA1 polys 21.1 1.9E+02 0.0042 26.7 5.3 35 410-444 110-144 (226)
129 PF01361 Tautomerase: Tautomer 21.1 1.3E+02 0.0028 21.2 3.2 34 419-452 1-35 (60)
130 smart00135 LY Low-density lipo 21.1 79 0.0017 20.0 2.0 18 201-218 12-29 (43)
131 PF03646 FlaG: FlaG protein; 20.8 2.2E+02 0.0048 22.9 5.0 50 185-234 41-96 (107)
132 COG1671 Uncharacterized protei 20.6 1.3E+02 0.0029 26.1 3.6 28 136-163 2-29 (150)
133 PF02590 SPOUT_MTase: Predicte 20.2 2.5E+02 0.0055 24.6 5.5 50 207-258 65-114 (155)
No 1
>PLN02371 phosphoglucosamine mutase family protein
Probab=100.00 E-value=4.2e-85 Score=690.89 Aligned_cols=442 Identities=70% Similarity=1.015 Sum_probs=369.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++.. +++++|||||||||||++||||||++++|.++.+++++++|
T Consensus 130 ~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~~~----~~~~~gGImITASHNP~~~NGiK~~~~~G~~~~~~~~~~ie 205 (583)
T PLN02371 130 RLADAVFAGLASAGLDVVDMGLATTPAMFMSTLTE----REDYDAPIMITASHLPYNRNGLKFFTKDGGLGKPDIKDILE 205 (583)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHHhc----cCCCceEEEEeCCCCCCCCCCEEEeCCCCCCCchHHHHHHH
Confidence 68999999999999999999999999999999732 23789999999999999999999999999999888888888
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCC---CCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGD---IEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~---~~~~~~~~kvvvd~~~G~~~~~~~~ll~~ 157 (462)
+....+.++.+..+........+.+...++.+.|++++.+.++...+. ...+++++|||+||+||+++.+++.+|++
T Consensus 206 ~~~~~~~e~~~~~~~~~~~~~~g~i~~~d~~~~Y~~~l~~~i~~~~~~~~~~~~~~~~lkIvvD~~nGag~~~~~~lL~~ 285 (583)
T PLN02371 206 RAARIYKEWSDEGLLKSSSGASSVVCRVDFMSTYAKHLRDAIKEGVGHPTNYETPLEGFKIVVDAGNGAGGFFAEKVLEP 285 (583)
T ss_pred HHHhhcccccccccchhhhccCCcEEEechHHHHHHHHHHHHHHhhccccccccCCCCCEEEEeCCCCchHHHHHHHHHH
Confidence 755322222111100000012355665688899999999988643210 01234689999999999999999999999
Q ss_pred cCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHH
Q 012505 158 LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237 (462)
Q Consensus 158 lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~ 237 (462)
|||+++..+|++|||.||++.|||+++++++.+.+.|++.+||+||++||||||++++|++|++|++|++++|+++++++
T Consensus 286 LG~~v~~~~~~~pDg~Fp~~~P~P~~~~~l~~l~~~v~~~~aDlGia~DgDaDR~~vvD~~G~~i~gd~l~aLla~~ll~ 365 (583)
T PLN02371 286 LGADTSGSLFLEPDGMFPNHIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIALMSAIVLE 365 (583)
T ss_pred cCCCeEeeccCCCCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCccceeEECCCCEEECHHHHHHHHHHHHHH
Confidence 99998634889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 238 EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 238 ~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
.+++..||++.+||. +++.+++++|+++++|||||+|++++|.+.+..|++++||||+|||++|+++++.+||++++++
T Consensus 366 ~~~g~~VV~~v~sS~-~l~~ia~~~G~~v~rt~vG~k~v~~~m~~~~~~~~~~~~ggEeSG~~~~~~~~~~dDg~~a~~~ 444 (583)
T PLN02371 366 EHPGTTIVTDSVTSD-GLTTFIEKKGGKHHRFKRGYKNVIDKGVRLNSDGEETHLMIETSGHGALKENHFLDDGAYLAVK 444 (583)
T ss_pred hCCCCEEEEecccch-hHHHHHHHcCCeEEEecCchHHHHHHHHHhhccCCceEEEEcccCeEEECCCCCCCcHHHHHHH
Confidence 877767876555555 6667888999999999999999999999877666678999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCc---cccCCcccchhH-HHHHHHHhhhcCCCCCCCC
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHS---DLKGGSFRDYGE-AVLKHLENRVDSDPKLQKA 393 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~-~v~~~l~~~~~~~~~~~~~ 393 (462)
+|++|+..+.+.+. ++|+++++++|+++...+++.++. |+ | +.++ ++|++|.+......++...
T Consensus 445 ile~la~~~~~~~~---~~Lsel~~~lp~~~~~~~~r~~v~--~~~~~~-------~~kg~~v~~~l~~~~~~~~~~~~~ 512 (583)
T PLN02371 445 IIIELVRMRAAGAG---GGLGDLIEDLEEPLEAVELRLKIL--DEGKDF-------KAYGEEVLEHLRNSIESDGKLEGA 512 (583)
T ss_pred HHHHHHHHHhccCC---CCHHHHHHhchhccCCceeeecCC--ccchhH-------HHHHHHHHHHHHhhhhcccccccC
Confidence 99999987533111 459999999998765566666665 65 5 2233 7999997643221223334
Q ss_pred CccccceEEEE----ecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCCChhhHHHHHh
Q 012505 394 PVNYEGQVRVS----GSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPALDTSALDKFVQ 460 (462)
Q Consensus 394 ~~~~dG~iki~----~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~~~~~~~~~~~~ 460 (462)
+..+|| +|++ +++||+|||||+|||+||||+||.+++.++++++.+.++|++|-+||+|+|+||++
T Consensus 513 ~~~~DG-vkv~~~~~~~~gWvLiRpS~TEP~iri~~Ea~s~e~a~~l~~~~~~~v~~~~~~~~~~~~~~~~ 582 (583)
T PLN02371 513 PVNYEG-VRVSDEGEGFGGWFLLRQSLHDPVIPLNIESSSPGGAQKMALVVLTWLKEFAALDASALDKFLD 582 (583)
T ss_pred ccccce-EEEEecccCCCceEEEEeCCCCceEEEEEeECCHHHHHHHHHHHHHHHhhhchhhHHHHHHhhc
Confidence 567999 9999 78899999999999999999999999999999999999999999999999999987
No 2
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
Probab=100.00 E-value=1.7e-81 Score=648.40 Aligned_cols=392 Identities=34% Similarity=0.491 Sum_probs=336.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++|+|||||||||||++||||||+++ |+++.++.++.|+
T Consensus 51 ~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~~v~------~~~a~gGI~ITASHNP~~~nGiK~~~~-G~~~~~~~~~~Ie 123 (443)
T cd03089 51 ELAAALIEGLLAAGCDVIDIGLVPTPVLYFATF------HLDADGGVMITASHNPPEYNGFKIVIG-GGPLSGEDIQALR 123 (443)
T ss_pred HHHHHHHHHHHHcCCcEEEeCCcchHHHHHHHh------ccCCCeEEEEecCCCCcccCceEeccC-CCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 678999999999999999999999999 8887777666666
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~ 160 (462)
+..... .+.+ ....+.+...+..+.|++.+.+.++. ..+++|||+||+||+++.+++++|++|||
T Consensus 124 ~~~~~~-~~~~-------~~~~g~~~~~d~~~~Y~~~l~~~i~~-------~~~~lkVvvd~~~G~~~~~~~~ll~~lG~ 188 (443)
T cd03089 124 ERAEKG-DFAA-------ATGRGSVEKVDILPDYIDRLLSDIKL-------GKRPLKVVVDAGNGAAGPIAPQLLEALGC 188 (443)
T ss_pred HHHHhc-cccc-------cCCCCcEEECCCHHHHHHHHHHhccc-------ccCCCeEEEECCCCchHHHHHHHHHHCCC
Confidence 543211 1110 12345666668899999999888742 12689999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012505 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (462)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~ 240 (462)
+++ .+|+.|||.||++.|+|+.+++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|+++++++..+
T Consensus 189 ~v~-~i~~~~d~~F~~~~p~p~~~~~l~~l~~~v~~~~adlgia~D~DaDR~~ivd~~G~~l~~d~~~~lla~~ll~~~~ 267 (443)
T cd03089 189 EVI-PLFCEPDGTFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGDRLGVVDEKGEIIWGDRLLALFARDILKRNP 267 (443)
T ss_pred EEE-EecCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCcceeEEECCCCcEeCHHHHHHHHHHHHHHHCC
Confidence 998 6999999999999999998899999999999999999999999999999999999999999999999999998876
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecC-CcccCcHHHHHHHHH
Q 012505 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE-NHWLDDGAYLMVKLL 319 (462)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~-~~~~~Dgi~aa~~ll 319 (462)
++.||.++.|| .+++.+++++|++++||||||+|++++|.+.+ ++||||+|||++|++ +.+.+||+++++++|
T Consensus 268 ~~~vv~~v~ss-~~~~~ia~~~g~~v~~t~vG~k~v~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~~Dgi~a~l~il 341 (443)
T cd03089 268 GATIVYDVKCS-RNLYDFIEEAGGKPIMWKTGHSFIKAKMKETG-----ALLAGEMSGHIFFKDRWYGFDDGIYAALRLL 341 (443)
T ss_pred CCeEEEecccc-hHHHHHHHHcCCeEEEecCcHHHHHHHHHHhC-----CcEEEeccceEEEcCCcCCCccHHHHHHHHH
Confidence 66677655555 57777889999999999999999999999866 469999999999999 999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++|+..+ ++|+++++++|+++...+ +++. |+| +.++++|+++.+..... ...+.++||
T Consensus 342 e~la~~~--------~~Lsel~~~~p~~~~~~~--~~~~--~~~-------~~k~~~~~~l~~~~~~~---~~~~~~~DG 399 (443)
T cd03089 342 ELLSKSG--------KTLSELLADLPKYFSTPE--IRIP--VTE-------EDKFAVIERLKEHFEFP---GAEIIDIDG 399 (443)
T ss_pred HHHHhcC--------CCHHHHHHhccccCCCCc--eecc--CCc-------hhHHHHHHHHHHHhccc---cCCeeeecC
Confidence 9988643 469999999999654433 3455 887 45778999998754321 024667899
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i 444 (462)
+|+.+++||+|||||||||++|||+||.|++.++++++.+.+.+
T Consensus 400 -iki~~~~~WvliRpSgtEP~iriy~Ea~~~~~a~~l~~~~~~~~ 443 (443)
T cd03089 400 -VRVDFEDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRKLL 443 (443)
T ss_pred -EEEEECCeeEEEeecCCCCEEEEEEEeCCHHHHHHHHHHHHhhC
Confidence 99998899999999999999999999999999999999987753
No 3
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1e-79 Score=635.02 Aligned_cols=396 Identities=24% Similarity=0.353 Sum_probs=337.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++.|||||||||||++||||||++++|.++.++.++.++
T Consensus 51 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 124 (449)
T PRK14321 51 MLKNALISGLLSTGVDVIDIGLAPTPLTGFAIK------LYNADAGVTITASHNPPEYNGIKVWQRNGMAYTPEMENELE 124 (449)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCCcHHHHHHH------hcCCCeEEEEEeCCCCHHHCcEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~ 160 (462)
+.+... .+.+.. ....+.+...++.+.|++.+.+.++. .+++|||+||+||+++.+++++|++|||
T Consensus 125 ~~~~~~-~~~~~~-----~~~~g~~~~~~~~~~Y~~~l~~~~~~--------~~~~kVvvD~~~G~~~~~~~~il~~lg~ 190 (449)
T PRK14321 125 RIIESG-NFKRVP-----WNEIGTLRRADPKEEYIKAALEMIKL--------ENSYTVVVDSGNGAGSILSPYLQRELGN 190 (449)
T ss_pred HHHhcc-cccccc-----cccCceeeecccHHHHHHHHHHhcCc--------CCCCEEEEECCCchHHHHHHHHHHHcCC
Confidence 654211 111100 01124455557889999999888742 2689999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012505 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (462)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~ 240 (462)
+++ .+|+.|||.|| +.|+|. +++|+.+.+.+++.+||+|+++||||||++++|++|+++++|++++|+++++++.++
T Consensus 191 ~v~-~i~~~~d~~f~-~~p~p~-~~~l~~l~~~v~~~~adlGia~DgD~DR~~vvd~~G~~~~~d~~~~l~a~~ll~~~~ 267 (449)
T PRK14321 191 KVI-SLNSHPSGFFV-RELEPN-AKSLSMLAKTVKVLKADVGIAHDGDADRIGVVDDQGNFVEYEVMLSLIAGYMLRKFG 267 (449)
T ss_pred EEE-EeCccCCCCCC-CCCCCc-hhhHHHHHHHHHHCCCCEEEEecCCCceEEEECCCCCEeChHHHHHHHHHHHHHhCC
Confidence 998 69999999998 478887 788999999999999999999999999999999999999999999999999998766
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHHH
Q 012505 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLN 320 (462)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~ 320 (462)
+..||.+. +|+.+++.+++++|+++++||+||+|++++|.+.+ .+||||+|||++|+++++.+||+++++++|+
T Consensus 268 ~~~vV~~v-~ss~~i~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sGg~~~~~~~~~~Dgi~a~~~ile 341 (449)
T PRK14321 268 KGKIVTTV-DAGFALDDYIRPLGGEVIRTRVGDVAVAEELAKHG-----GVFGGEPSGTWIIPQWNLTPDGIFAGALVLE 341 (449)
T ss_pred CCcEEEec-cccHHHHHHHHHcCCEEEEEecChHHHHHHHHhhC-----CEEEecCCCCEEeCCcCCCCCHHHHHHHHHH
Confidence 56677654 55557788889999999999999999999998765 4799999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCC-CCCCccccc
Q 012505 321 KLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKL-QKAPVNYEG 399 (462)
Q Consensus 321 ~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~-~~~~~~~dG 399 (462)
+|+... +|+++++.+|.++.. +.++. |+| +.|+++|+++.+.... .. ..+++.+||
T Consensus 342 ~la~~~---------~Ls~l~~~~~~~~~~---~~~v~--~~~-------~~k~~~~~~l~~~~~~--~~~~~~v~~~DG 398 (449)
T PRK14321 342 MIDRLG---------PISELAKEVPRYVTL---RAKIP--CPN-------EKKAKAMEIIAKEALK--NFDYERLIDIDG 398 (449)
T ss_pred HHHcCC---------CHHHHHHhccccccc---ccccc--Cch-------hhHHHHHHHHHHHhhh--hcccCceeecce
Confidence 988642 399999999986533 23455 887 4578899988654321 01 125677899
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
+|+.+++||+|||||||||++|||+||.|++.++++++.+.++|+++++
T Consensus 399 -vkv~~~~~WvliRpS~TeP~~riy~Ea~s~e~~~~l~~~~~~~i~~~~~ 447 (449)
T PRK14321 399 -IRIENDDWWILFRPSGTEPIMRITLEAHTEEKAEELMEKAEKLVKEAIK 447 (449)
T ss_pred -EEEecCCcEEEEecCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999888999999999999999999999999999999999999998754
No 4
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
Probab=100.00 E-value=1.3e-78 Score=626.15 Aligned_cols=392 Identities=27% Similarity=0.370 Sum_probs=327.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHH--HHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPD--IKDI 78 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~--~~~~ 78 (462)
||++|+++||+++|++|+++|.+|||+++|+++ +++| +||||||||||++|||+|++.+.|.+++++ ++++
T Consensus 50 ~l~~a~~~gL~s~G~~V~~lg~~pTP~~~~av~------~~~~-~Gi~iTaSHNP~~~nG~Ki~~~~~~~~~~~~~i~~i 122 (445)
T PRK09542 50 ELAAAFAEGVTAQGLDVVRIGLASTDQLYFASG------LLDC-PGAMFTASHNPAAYNGIKLCRAGAKPVGQDTGLAAI 122 (445)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCHHHHheec------ccCC-CEEEEcCCCCCCccCcEEEecCCCcccCchhHHHHH
Confidence 689999999999999999999999999999997 5677 699999999999999999998877766654 2333
Q ss_pred HHHHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012505 79 LERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (462)
Q Consensus 79 ie~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~l 158 (462)
.+.... .... . ....+.+...+..+.|++++.+.++.+ ..+++|||+||+||+++.+++.+|++|
T Consensus 123 ~~~~~~---~~~~-----~-~~~~g~~~~~~~~~~Y~~~l~~~i~~~------~i~~lkVvvd~~~Ga~~~~~~~ll~~l 187 (445)
T PRK09542 123 RDDLIA---GVPA-----Y-DGPPGTVTERDVLADYAAFLRSLVDLS------GIRPLKVAVDAGNGMGGHTVPAVLGGL 187 (445)
T ss_pred HHHHhc---cccc-----c-cCCCCceeccChHHHHHHHHHHhcccc------cCCCCEEEEECCCCchhHHHHHHHHhC
Confidence 221110 0000 0 112355555578899999998887531 226899999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012505 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (462)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~ 238 (462)
||+++ .+|+.|||.||++.|||+.+++|+.+.+.+++.+||+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 188 g~~vv-~~~~~~d~~Fp~~~p~P~~~~~l~~l~~~v~~~~adlGia~DgD~DR~~ivd~~G~~l~~d~~~~l~~~~~l~~ 266 (445)
T PRK09542 188 PITLL-PLYFELDGTFPNHEANPLDPANLVDLQAFVRETGADIGLAFDGDADRCFVVDERGQPVSPSAVTALVAARELAR 266 (445)
T ss_pred CCEEE-EEecCcCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEECCCCceEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 99999 69999999999999999988999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHH
Q 012505 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (462)
Q Consensus 239 ~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (462)
++++.||.+..||. +++.+++++|+++++|||||+|++++|.+.+ .+||||+|||++|+++++.+||+++++++
T Consensus 267 ~~~~~vv~~v~ss~-~~~~~a~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sgg~~f~~~~~~~Dgi~a~~~l 340 (445)
T PRK09542 267 EPGATIIHNLITSR-AVPELVAERGGTPVRTRVGHSFIKALMAETG-----AIFGGEHSAHYYFRDFWGADSGMLAALHV 340 (445)
T ss_pred CCCCeEEEeeccch-hHHHHHHHcCCeEEEecCcHHHHHHHHHHhC-----CcEEEeeeccEEecCcCCCCcHHHHHHHH
Confidence 77767876555554 6777889999999999999999999998765 46999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCcccc
Q 012505 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (462)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (462)
|++|+... ++|+++++.+|+++...++ . |+| ..++++|+++.+.+... ..++..+|
T Consensus 341 le~l~~~~--------~~l~~l~~~~~~~~~~~~~----~--~~~-------~~~~~~~~~l~~~~~~~---~~~~~~~D 396 (445)
T PRK09542 341 LAALGEQD--------RPLSELMADYQRYAASGEI----N--STV-------ADAPARMEAVLKAFADR---IVSVDHLD 396 (445)
T ss_pred HHHHHhcC--------CCHHHHHHhhhhcCcccce----e--ecC-------CCHHHHHHHHHHHhhhc---cCCceecc
Confidence 99987643 4599999999986544333 2 665 23556889987654321 12466789
Q ss_pred ceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 399 GQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 399 G~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
| ||+++ |++|+|||||||||++|||+||.|++.++++++.+.++|+.
T Consensus 397 G-vki~~~dg~WvliRpSgTEP~lriy~Ea~~~e~~~~l~~~~~~~v~~ 444 (445)
T PRK09542 397 G-VTVDLGDGSWFNLRASNTEPLLRLNVEARTEEEVDALVDEVLAIIRA 444 (445)
T ss_pred e-EEEEecCCcEEEEEecCCCcEEEEEEEeCCHHHHHHHHHHHHHHhhc
Confidence 9 99997 56799999999999999999999999999999999998863
No 5
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.5e-78 Score=626.35 Aligned_cols=391 Identities=27% Similarity=0.389 Sum_probs=328.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++++|.++.++.++.++
T Consensus 52 ~l~~a~~~gL~~~G~~V~~~g~~pTP~~~~a~~------~~~~~~GI~ITaShnp~~~nGiK~~~~~G~~~~~~~~~~i~ 125 (445)
T cd05803 52 MLEKIVIGALLACGCDVIDLGIAPTPTVQVLVR------QSQASGGIIITASHNPPQWNGLKFIGPDGEFLTPDEGEEVL 125 (445)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCchHHHHHHH------HhCCCeeEEEEecCCCcccccEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 67899999999999999999999999999998877766665
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
..... +.+.+.. ....+.+... +..+.|++++.+.++.+.. .++.+++|||+||+||+++.+++++|++||
T Consensus 126 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~~~~--~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 197 (445)
T cd05803 126 SCAEA-GSAQKAG-----YDQLGEVTFSEDAIAEHIDKVLALVDVDVI--KIRERNFKVAVDSVNGAGGLLIPRLLEKLG 197 (445)
T ss_pred HHHhc-ccccccc-----cccCcceeccCchHHHHHHHHHhhcccchh--hhccCCCEEEEECCCCcHHHHHHHHHHHcC
Confidence 53321 1111100 0122444433 5778899999887653221 122568999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh-
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE- 238 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~- 238 (462)
|+++ .+|+.|||.|| +.|+|. +++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 198 ~~v~-~~~~~~d~~F~-~~p~p~-~~~l~~l~~~v~~~~adlgi~~D~DgDR~~ivd~~G~~i~~d~~~al~a~~ll~~~ 274 (445)
T cd05803 198 CEVI-VLNCEPTGLFP-HTPEPL-PENLTQLCAAVKESGADVGFAVDPDADRLALVDEDGRPIGEEYTLALAVDYVLKYG 274 (445)
T ss_pred CEEE-EeCCcCCCCCC-CCCCCC-hHHHHHHHHHHHhcCCCEEEeeCCCCceEEEECCCCCCcChHHHHHHHHHHHHHhc
Confidence 9988 69999999998 788888 7889999999999999999999999999999999999999999999999999984
Q ss_pred CCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHH
Q 012505 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (462)
Q Consensus 239 ~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (462)
.+++.||. +++|+.+++.+++++|+++++|||||+|++++|.+.+ .+||+|+|||++|+++++.+||+++++++
T Consensus 275 ~~~~~vv~-~v~ss~~i~~ia~~~g~~v~~t~vG~~~i~~~~~~~~-----~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~ 348 (445)
T cd05803 275 GRKGPVVV-NLSTSRALEDIARKHGVPVFRSAVGEANVVEKMKEVD-----AVIGGEGNGGVILPDVHYGRDSLVGIALV 348 (445)
T ss_pred CCCCCEEE-eccchHHHHHHHHHcCCEEEEecccHHHHHHHHHhcC-----CeEEEeccCCeecCCccccccHHHHHHHH
Confidence 22335775 5556668888999999999999999999999998765 46999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCcccc
Q 012505 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (462)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (462)
|++|+... ++|+++++++|.++.. +.+++ |+| +.++++|++|.+.... .++..+|
T Consensus 349 le~la~~~--------~~L~~l~~~~~~~~~~---~~~v~--~~~-------~~~~~i~~~l~~~~~~-----~~v~~~D 403 (445)
T cd05803 349 LQLLAASG--------KPLSEIVDELPQYYIS---KTKVT--IAG-------EALERLLKKLEAYFKD-----AEASTLD 403 (445)
T ss_pred HHHHHhcC--------CCHHHHHHhchhhhee---eeeee--ccH-------HhHHHHHHHHHHhccc-----CCcccCc
Confidence 99998653 4699999999986433 23566 887 4577899999764321 2566799
Q ss_pred ceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHH
Q 012505 399 GQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAV 440 (462)
Q Consensus 399 G~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~ 440 (462)
| ||++++++|+|||||||||++|||+|+.|++.++++++.+
T Consensus 404 G-ik~~~~~~W~liRpS~teP~~riy~Ea~s~e~a~~l~~~~ 444 (445)
T cd05803 404 G-LRLDSEDSWVHVRPSNTEPIVRIIAEAPTQDEAEALADRF 444 (445)
T ss_pred e-EEEecCCeEEEEeccCCccEEEEEEecCCHHHHHHHHHhh
Confidence 9 9999888999999999999999999999999999999876
No 6
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
Probab=100.00 E-value=1.1e-78 Score=630.75 Aligned_cols=401 Identities=27% Similarity=0.309 Sum_probs=335.5
Q ss_pred CHHHHHHHHHHhCCCcEEEe-CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQY-GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~-g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~i 79 (462)
||++++++||+++|++|+++ |.+|||+++|++. +++|+|||||||||||++||||||++++|.+++++.++.+
T Consensus 54 ~l~~a~~~gL~s~G~~V~~~~g~~pTP~~~~a~~------~~~~~gGI~ITaSHnp~~~ngiK~~~~~G~~i~~~~~~~i 127 (461)
T cd05800 54 EFARAVAEVLAANGIDVYLSDRPVPTPAVSWAVK------KLGAAGGVMITASHNPPEYNGVKVKPAFGGSALPEITAAI 127 (461)
T ss_pred HHHHHHHHHHHHCCCEEEEcCCCCCchHHHHHHH------HhCCCeeEEEccCCCCcccCeEEEeCCCCCcCChHHHHHH
Confidence 68999999999999999999 7999999999997 5789999999999999999999999999999988877777
Q ss_pred HHHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
|+..... .+.+. .....+.+...+..+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++||
T Consensus 128 e~~~~~~-~~~~~-----~~~~~g~i~~~~~~~~Y~~~l~~~~~~~~----i~~~~~kivvd~~~G~~~~~~~~il~~lg 197 (461)
T cd05800 128 EARLASG-EPPGL-----EARAEGLIETIDPKPDYLEALRSLVDLEA----IREAGLKVVVDPMYGAGAGYLEELLRGAG 197 (461)
T ss_pred HHHHhhc-ccccc-----ccccCCceeecCCHHHHHHHHHHHhChhh----hhcCCceEEEeCCCCCcHHHHHHHHHHcC
Confidence 7654321 11100 01123556656788999999998875322 34579999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|+|+ ++++..+.+.+++.+||+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 198 ~~v~-~~~~~~dg~F~~~~p~p~-~~~l~~l~~~v~~~~ad~Gia~D~DgDR~~vvd~~G~~l~~d~~~al~a~~ll~~~ 275 (461)
T cd05800 198 VDVE-EIRAERDPLFGGIPPEPI-EKNLGELAEAVKEGGADLGLATDGDADRIGAVDEKGNFLDPNQILALLLDYLLENK 275 (461)
T ss_pred CCEE-EeeCCcCCCCCCCCCCCC-HHHHHHHHHHHHhcCCCEEEEECCCCCeEEEEeCCCceeCHHHHHHHHHHHHHHcC
Confidence 9998 689999999999999999 68899999999999999999999999999999999999999999999999999873
Q ss_pred -CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHH
Q 012505 240 -PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (462)
Q Consensus 240 -~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (462)
+++.||.+.. |+.+++.+++++|+++++||||+++++++|.+.+ .+||+|+|||++|+++.+.+||+++++++
T Consensus 276 ~~~~~vv~~v~-ss~~~~~~a~~~g~~v~~t~~G~~~v~~~~~~~~-----~~~g~E~sg~~~~~~~~~~~Dgi~a~l~i 349 (461)
T cd05800 276 GLRGPVVKTVS-TTHLIDRIAEKHGLPVYETPVGFKYIAEKMLEED-----VLIGGEESGGLGIRGHIPERDGILAGLLL 349 (461)
T ss_pred CCCCcEEEEcc-hHHHHHHHHHHhCCeeeeCCCCHHHHHHHHhhCC-----eEEEEcCcCceeCCCCCCCchHHHHHHHH
Confidence 3445775554 5557788999999999999999999999998754 47999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCcc-cceeeeeecccCccccCCcccchhHHHHHHHHhhhcC-CCCCC-CCCc
Q 012505 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDS-DPKLQ-KAPV 395 (462)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~-~~~~~-~~~~ 395 (462)
|++|+..+ ++|+++++++|++|. ....+.++. |+| +.++++|++|.+.... ..+.. .++.
T Consensus 350 le~la~~~--------~~L~~l~~~l~~~~g~~~~~~~~i~--~~~-------~~~~~v~~~l~~~~~~~~~~~~~~~~~ 412 (461)
T cd05800 350 LEAVAKTG--------KPLSELVAELEEEYGPSYYDRIDLR--LTP-------AQKEAILEKLKNEPPLSIAGGKVDEVN 412 (461)
T ss_pred HHHHHhhC--------CCHHHHHHHHHHHhCCCceeecCee--cCH-------HHHHHHHHHHhccCchhhCCceeEEEE
Confidence 99987643 469999999996432 122234455 887 4578899999874321 11111 2355
Q ss_pred cccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHH
Q 012505 396 NYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAA 443 (462)
Q Consensus 396 ~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~ 443 (462)
.+|| ||+++ +++|+|||||||||++|||+|+.|++.++++++.+.+.
T Consensus 413 ~~dG-vrv~~~d~~wvlvRpS~tep~iriy~Ea~~~~~a~~l~~~~~~~ 460 (461)
T cd05800 413 TIDG-VKLVLEDGSWLLIRPSGTEPLLRIYAEAPSPEKVEALLDAGKKL 460 (461)
T ss_pred ecCe-EEEEEcCCcEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHhh
Confidence 6899 99997 56799999999999999999999999999999998875
No 7
>PRK15414 phosphomannomutase CpsG; Provisional
Probab=100.00 E-value=2.7e-78 Score=625.01 Aligned_cols=396 Identities=24% Similarity=0.349 Sum_probs=327.2
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHH-HHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDI-KDIL 79 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~-~~~i 79 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++|+|||||||||||++|||+|+++++|.+++++. ...+
T Consensus 53 ~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHNP~~~NG~Ki~~~~g~~~~~~~~~~~i 126 (456)
T PRK15414 53 TLKLALAKGLQDAGVDVLDIGMSGTEEIYFATF------HLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDV 126 (456)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcChHHHHHhhh------ccCCCeEEEEecCCCCCCCCCEEeecCCCcccCcHHHHHHH
Confidence 689999999999999999999999999999997 578999999999999999999999999887776653 2234
Q ss_pred HHHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHH---Hh
Q 012505 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKV---LE 156 (462)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~l---l~ 156 (462)
++... ++++........+.+...+..+.|++++.+.++.. +.+++|||+||+||+++.+++.+ |+
T Consensus 127 ~~~~~------~~~~~~~~~~~~g~~~~~~~~~~Yi~~l~~~id~~------~~~~lkVvvD~~~G~~~~~~~~l~~~l~ 194 (456)
T PRK15414 127 QRLAE------ANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVK------NLTPLKLVINSGNGAAGPVVDAIEARFK 194 (456)
T ss_pred HHHHh------cCCcccccccCCCcEEecCcHHHHHHHHHHhcccc------cCCCCEEEEECCCCcchhhHHHHHHHHH
Confidence 44321 11111000122355666678899999998877421 23689999999999999999999 99
Q ss_pred hcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHH
Q 012505 157 PLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAI 234 (462)
Q Consensus 157 ~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~ 234 (462)
+|||+ ++ .+|+.|||.||++.|||+.+++++.+.+.+++.+||+|+++||||||++++|++|+++++|++++|++++
T Consensus 195 ~lG~~v~v~-~~~~~pdg~F~~~~p~P~~~~~l~~l~~~v~~~~adlGia~DgDaDR~~~vde~G~~l~~d~~~~l~a~~ 273 (456)
T PRK15414 195 ALGAPVELI-KVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEA 273 (456)
T ss_pred hcCCCeEEE-EeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcceEEEECCCCCEecHHHHHHHHHHH
Confidence 99994 45 5889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHH
Q 012505 235 VLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYL 314 (462)
Q Consensus 235 ~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~a 314 (462)
+++.++++.+|.++.+|+.+.+ +++++|+++++|||||+||+++|.+.+ ++||||+|||++|+++.+.+||+++
T Consensus 274 ll~~~~g~~vv~~~~~s~~l~~-~~~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a 347 (456)
T PRK15414 274 FLEKNPGAKIIHDPRLSWNTVD-VVTAAGGTPVMSKTGHAFIKERMRKED-----AIYGGEMSAHHYFRDFAYCDSGMIP 347 (456)
T ss_pred HHHhCCCCeeccCchhhhHHHH-HHHHcCCEEEEecCcHHHHHHHHHhcC-----CeEEEcccceEEeCCCCCCccHHHH
Confidence 9988776668877888885555 668899999999999999999998865 4799999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCc-ccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCC
Q 012505 315 MVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPG-FAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKA 393 (462)
Q Consensus 315 a~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~ 393 (462)
++++|++|+..+ ++|+++++++++.+ .+..++.++. |+| +.++++++++.+.. .+
T Consensus 348 ~~~ile~la~~~--------~~L~~l~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~-------~~ 403 (456)
T PRK15414 348 WLLVAELVCLKG--------KTLGELVRDRMAAFPASGEINSKLA--QPV-------EAINRVEQHFSREA-------LA 403 (456)
T ss_pred HHHHHHHHHccC--------CCHHHHHHHHHHhcCCCCccccCCC--CHH-------HHHHHHHHHhcccc-------Cc
Confidence 999999988532 46999999766443 2223333344 666 34566776664311 24
Q ss_pred CccccceEEEEecCeEEEEeecCCCceeEEEEeeC-CHHHHHHHHHHHHHHhhc
Q 012505 394 PVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAP-SREDAVKLGLAVAAATKE 446 (462)
Q Consensus 394 ~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~-~~~~a~~l~~~~~~~i~~ 446 (462)
+..+|| +|+++++||++||||||||++|||+||. +++.++++++.+.+.|++
T Consensus 404 ~~~~DG-vki~~~~~~lllRpSgTEP~iri~~Ea~~~~~~~~~~~~~~~~~~~~ 456 (456)
T PRK15414 404 VDRTDG-ISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE 456 (456)
T ss_pred EEecce-eEEEeCCceEEEecCCCceEEEEEEecCCCHHHHHHHHHHHHHHhhC
Confidence 667899 9999877888999999999999999998 899999999988887753
No 8
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=100.00 E-value=3.1e-78 Score=623.82 Aligned_cols=392 Identities=22% Similarity=0.305 Sum_probs=327.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.++
T Consensus 49 ~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 122 (441)
T cd05805 49 MLKRALISGLLSTGVNVRDLGALPLPVARYAIR------FLGASGGIHVRTSPDDPDKVEIEFFDSRGLNISRAMERKIE 122 (441)
T ss_pred HHHHHHHHHHHhCCCeEEecCCcCchHHHHHHH------hcCCCeeEEEEeCCCCccceEEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.... +.+.+.. ....+.+... +..+.|++++.+.++.+. ++.+++||||||+||+++.+++++|++||
T Consensus 123 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~i~~~~----i~~~~lkIvvd~~~G~~~~~~~~ll~~lG 192 (441)
T cd05805 123 NAFFR-EDFRRAH-----VDEIGDITEPPDFVEYYIRGLLRALDTSG----LKKSGLKVVIDYAYGVAGIVLPGLLSRLG 192 (441)
T ss_pred HHHhh-hhhcccc-----HhhcCccccchhHHHHHHHHHHHHhCHHH----HhhcCCeEEEECCCchHHHHHHHHHHHcC
Confidence 64422 1111110 0112444433 577889999988775321 23568999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.+||.|+ +.|+| .+++++.+.+.|+++++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 193 ~~v~-~i~~~~d~~~~-~~~~~-~~~~l~~l~~~v~~~~adlgia~DgDaDR~~vvd~~G~~~~gd~l~~l~a~~ll~~~ 269 (441)
T cd05805 193 CDVV-ILNARLDEDAP-RTDTE-RQRSLDRLGRIVKALGADFGVIIDPNGERLILVDEAGRVISDDLLTALVSLLVLKSE 269 (441)
T ss_pred CEEE-EEecccCCccC-CCCcc-chhHHHHHHHHHHhCCCCEEEEEcCCCCEEEEECCCCCEEChhHHHHHHHHHHHHhC
Confidence 9998 68999999852 34555 578999999999999999999999999999999999999999999999999998865
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
+...||.+.+||. +++.+++++|+++++|+|||+|++++|.+ + ++||||+|||++|+++.+.+||++++++++
T Consensus 270 ~~~~vv~~v~ss~-~l~~~a~~~g~~~~~t~vG~~~i~~~m~~-~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ll 342 (441)
T cd05805 270 PGGTVVVPVTAPS-VIEQLAERYGGRVIRTKTSPQALMEAALE-N-----VVLAGDGDGGFIFPEFHPGFDAIAALVKIL 342 (441)
T ss_pred CCCeEEEEccchH-HHHHHHHHcCCEEEEEeCChHHHHHHHHh-c-----ccccccCCCcEEccccccCchHHHHHHHHH
Confidence 5556876666665 66778899999999999999999999987 4 469999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++|+... ++|+++++++|+++.. +.++. |+| +.++++|++|.+.... .++..+||
T Consensus 343 e~la~~~--------~~l~~l~~~l~~~~~~---~~~~~--~~~-------~~~~~~~~~l~~~~~~-----~~~~~~DG 397 (441)
T cd05805 343 EMLARTN--------ISLSQIVDELPRFYVL---HKEVP--CPW-------EAKGRVMRRLIEEAPD-----KSIELIDG 397 (441)
T ss_pred HHHHhcC--------CCHHHHHHhCchhhee---eeEEE--CCh-------HHhhHHHHHHHHhcCC-----CCceecce
Confidence 9988542 4699999999987543 23444 776 3456799999764421 24667899
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i 444 (462)
+|+.+++||+|||||||||+||||+||.|++.++++++.+.++|
T Consensus 398 -vri~~~~gW~liRpS~TeP~iri~~Ea~~~~~~~~l~~~~~~~~ 441 (441)
T cd05805 398 -VKIYEDDGWVLVLPDADEPLCHIYAEGSDQERAEELTEFYVEKV 441 (441)
T ss_pred -eEEecCCCEEEEecCCCCCEEEEEEecCCHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999999999998764
No 9
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.7e-77 Score=618.39 Aligned_cols=391 Identities=29% Similarity=0.431 Sum_probs=331.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++ .|||||||||||++||||||++++|.+++++.++.+|
T Consensus 48 ~l~~a~~~gL~~~G~~V~~~g~~~tP~~~~~v~------~~~-~gGi~ItaShnp~~~ngiK~~~~~G~~i~~~~~~~Ie 120 (439)
T cd03087 48 MLKNAVIAGLLSAGCDVIDIGIVPTPALQYAVR------KLG-DAGVMITASHNPPEYNGIKLVNPDGTEFSREQEEEIE 120 (439)
T ss_pred HHHHHHHHHHHHCCCeEEEcCccChHHHHHHHH------hcC-CceEEEEeCCCCHHHCcEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 567 8999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEc-cHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVD-YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+..... .+.+.. ....+.+...+ +.+.|++++.+.++.. ..+++|||+||+||+++.+++++|++||
T Consensus 121 ~~~~~~-~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~~------~~~~lkIvid~~~G~~~~~~~~~l~~lg 188 (439)
T cd03087 121 EIIFSE-RFRRVA-----WDEVGSVRREDSAIDEYIEAILDKVDID------GGKGLKVVVDCGNGAGSLTTPYLLRELG 188 (439)
T ss_pred HHHhcC-Cccccc-----cccCeeEEecCccHHHHHHHHHHhcCcc------cCCCCEEEEECCCCchHHHHHHHHHHcC
Confidence 644211 111100 01124455556 8899999998877421 1468999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|+|. +++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 189 ~~v~-~~~~~~d~~f~~~~p~p~-~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~l~a~~ll~~- 265 (439)
T cd03087 189 CKVI-TLNANPDGFFPGRPPEPT-PENLSELMELVRATGADLGIAHDGDADRAVFVDEKGRFIDGDKLLALLAKYLLEE- 265 (439)
T ss_pred CEEE-EECCcCCCCCCCCCCCCC-HHHHHHHHHHHHhcCCCEEEEEcCCCceEEEECCCCCEechHHHHHHHHHHHHhc-
Confidence 9998 589999999999999998 7889999999999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
+++.||.+ ++|+.+++.+++++|+++++|+|||+|++++|.+.+ ++||||+|||++|+++.+.+||+++++++|
T Consensus 266 ~~~~vv~~-v~ss~~l~~~a~~~g~~~~~~~~G~k~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a~~~ll 339 (439)
T cd03087 266 GGGKVVTP-VDASMLVEDVVEEAGGEVIRTPVGDVHVAEEMIENG-----AVFGGEPNGGWIFPDHQLCRDGIMTAALLL 339 (439)
T ss_pred CCCcEEEe-ccchHHHHHHHHHcCCEEEEEecChHHHHHHHHhcC-----CeEEecCCCCEecCCcCCcCCHHHHHHHHH
Confidence 55567754 455557777889999999999999999999998754 579999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++|+.. + +|+++++++|+++.. +.++. |+| +.++++|+++.+..... ..++..+||
T Consensus 340 e~l~~~-~--------~l~~~~~~~~~~~~~---~~~v~--~~~-------~~~~~i~~~l~~~~~~~---~~~i~~~DG 395 (439)
T cd03087 340 ELLAEE-K--------PLSELLDELPKYPLL---REKVE--CPD-------EKKEEVMEAVEEELSDA---DEDVDTIDG 395 (439)
T ss_pred HHHhcC-C--------CHHHHHHhccccccc---ccccc--CCh-------HhHHHHHHHHHHhhhhc---cCCeeecce
Confidence 988754 1 499999999986533 23455 887 45788999998754211 124667899
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i 444 (462)
+|+++++||++||||||||++|||+|+.|++.+++|+..+.+++
T Consensus 396 -~k~~~~~~WvliRpS~tep~~rvy~Ea~~~~~a~~l~~~~~~~~ 439 (439)
T cd03087 396 -VRIEYEDGWVLIRPSGTEPKIRITAEAKTEERAKELLEEGRSKV 439 (439)
T ss_pred -EEEecCCcEEEEeccCCccEEEEEEeeCCHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999999999998764
No 10
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-76 Score=608.33 Aligned_cols=401 Identities=32% Similarity=0.441 Sum_probs=334.8
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++++|.+++++.+..|+
T Consensus 59 ~~~~a~~~gl~~~G~~v~~~g~~pTP~~~f~~~------~~~~~~gvmITASHNP~~yNGiK~~~~~G~~i~~~~e~~Ie 132 (464)
T COG1109 59 MLAAALAAGLTSAGIDVYDLGLVPTPAVAFATR------KLGADAGVMITASHNPPEYNGIKFFGSDGGKISDDIEEEIE 132 (464)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHH------hcCCCeEEEEecCCCCchhCcEEEEcCCCCcCChHHHHHHH
Confidence 689999999999999999999999999999997 67888999999999999999999999999999988888876
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEc-cHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVD-YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.......+.+. .....+.+...+ ..+.|++.+.+.+... ..++++|||+||+||+++.+++++|++||
T Consensus 133 ~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~Y~~~i~~~~~~~-----~~~~~lkVv~d~~nGaa~~~~~~ll~~lG 202 (464)
T COG1109 133 AILAEEVDLPRP-----SWGELGRLKRIPDALDRYIEFIKSLVDVD-----LKLRGLKVVVDCANGAAGLVAPRLLKELG 202 (464)
T ss_pred HHHhcccccccc-----ccccCCceeEcchhHHHHHHHHHHhcccc-----cccCCcEEEEECCCCchhHHHHHHHHHcC
Confidence 644221011110 011356666666 7899999999988642 24567999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|||+.++.+ .+.+.+++.++|+|++|||||||++++|++|++++||++++|++.++++..
T Consensus 203 ~~vv-~~~~~pDg~fp~~~p~p~~~~~~-~l~~~v~~~~aDlgia~DgDaDR~~~vd~~G~~~~Gd~i~~lla~~l~~~~ 280 (464)
T COG1109 203 AEVV-SINCDPDGLFPNINPNPGETELL-DLAKAVKEHGADLGIAFDGDADRLIVVDERGNFVDGDQILALLAKYLLEKG 280 (464)
T ss_pred CEEE-EecCCCCCCCCCCCCCCCCccHH-HHHHHHHhcCCCEEEEecCCCceEEEEcCCCCEeCccHHHHHHHHHHHhcC
Confidence 9999 69999999999988999987766 888888888999999999999999999999999999999999999999865
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
....||.+++||. ..+.+++.+|+++++|+|||+||.++|++.++ +||||+|||++|+.+...+||++++++++
T Consensus 281 ~~~~vV~tv~ss~-~~~~i~~~~g~~~~~t~vG~~~i~~~~~~~~~-----~~g~E~sg~~~~~~~~~~~Dgi~aal~il 354 (464)
T COG1109 281 KLPTVVTTVMSSL-ALEKIAKKLGGKVVRTKVGDKYIAEKMRENGA-----VFGGEESGHIIFPDHVRTGDGLLAALLVL 354 (464)
T ss_pred CCCeEEEecccch-hHHHHHHHcCCeEEEecCchHHHHHHHHhcCC-----eEEEcccCCEEECCCCcCCcHHHHHHHHH
Confidence 4336887777774 66668898999999999999999999998775 69999999999999999999999999998
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhh-ccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCcccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDG-LEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~-lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (462)
++++... ++|+++++. +|+++.+.++++++. . +.+..+++++.+..... ..+..+|
T Consensus 355 el~~~~~--------~~lsel~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~----~~~~~id 411 (464)
T COG1109 355 ELLAESG--------KSLSELLAELLPKYPQSVEINVRVT----D-------EGKAEVLEKLLEELREA----KKVDTID 411 (464)
T ss_pred HHHHHhC--------CCHHHHHHhhccccCCcceEeEEEc----c-------chhhhHHHHHHHhCccc----ceeeeee
Confidence 8877653 359999999 898765444444433 2 11224566665543221 2455679
Q ss_pred ceEEEEecCeEE-EEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 399 GQVRVSGSGGWF-LLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 399 G~iki~~~~~wv-liRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
| +|+.+++||. +||||||||++|||+|+.+.+.++++++.+.+.++.+..
T Consensus 412 g-v~~~~~~g~~~lvRpSGTEP~lrvy~Ea~~~~~~~~~~~~~~~~v~~~~~ 462 (464)
T COG1109 412 G-VKVELEDGGRVLVRPSGTEPLIRVYVEAKDEELAEELAEEIAELVREALG 462 (464)
T ss_pred e-EEEEeCCCcEEEEEeCCCceEEEEEEEECCHHHHHHHHHHHHHHHHhhhc
Confidence 9 9999877666 999999999999999999999999999999999988764
No 11
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=6.8e-75 Score=601.58 Aligned_cols=390 Identities=25% Similarity=0.304 Sum_probs=316.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.+|
T Consensus 70 ~l~~a~~~gL~s~Gv~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~Ie 143 (465)
T PRK14317 70 MLAMALAAGLTAAGREVWHLGLCPTPAVAYLTR------KSEAIGGLMISASHNPPEDNGIKFFGADGTKLSPELQAQIE 143 (465)
T ss_pred HHHHHHHHHHHHCCCeEEEecccCcHHHHHHHH------hcCCCEEEEEeCCCCCcccCCEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999999988888777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEE-EccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKR-VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.+... .+.+.. ....+.+.. .+..+.|++.+.+.++.. ++.+++|||+||+||+++.+++++|++||
T Consensus 144 ~~~~~~-~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~id~~-----i~~~~~kVvvD~~nG~~~~~~~~ll~~LG 212 (465)
T PRK14317 144 AGLRGE-LSSSDN-----ASNWGRHYHRPELLDDYRDALLESLPDR-----VNLQGVKIVLDLAWGAAVACAPEVFKALG 212 (465)
T ss_pred HHHhcc-cccccc-----hhcCCceEecCChHHHHHHHHHHhcCcc-----cccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654211 000000 012244443 367889999998887531 34578999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.|++..|. +++++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 213 ~~v~-~l~~~~dg~~~~~~~~---~~~l~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~l~~l~a~~ll~~~ 288 (465)
T PRK14317 213 AEVI-CLHDQPDGDRINVNCG---STHLEPLQAAVLEHGADMGFAFDGDADRVLAVDGQGRVVDGDHILYLWGSHLQEQN 288 (465)
T ss_pred CeEE-EEecccCCCCCCCCCc---hHhHHHHHHHHHhcCCCEEEEECCCCcEEEEECCCCCEEChhHHHHHHHHHHHHhc
Confidence 9998 6899999999854433 35689999999999999999999999999999999999999999999999998863
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
+++.||.+ ++|+.+++.+++++|+++++||||++|++++|.+.+ ++||||+|||++|+++++.+||++++++
T Consensus 289 ~~~~~~VV~~-v~ss~~~~~~~~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~ 362 (465)
T PRK14317 289 QLPDNLLVAT-VMSNLGFERAWQQRGGQLERTAVGDQHVHAAMLETG-----AMLGGEQSGHILCHHHGLSGDGLLTALH 362 (465)
T ss_pred CCCCCeEEEe-eecchHHHHHHHHcCCeEEEcCCchHHHHHHHHHcC-----cEeeccccceEEEeccccCCcHHHHHHH
Confidence 44567755 555567677888899999999999999999998865 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecc---cCccccCCcccchhHHHHHHHHhhhcCCCCCCCCC
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQ---NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAP 394 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~ 394 (462)
+|++|+..+ ++|++++++++..|.....++.+.. .|+| +.++++++.+.+..
T Consensus 363 ile~la~~~--------~~lsel~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~~---------- 417 (465)
T PRK14317 363 LATLVHQSG--------VSLAELVDQSFQTYPQKLRNVRVEDRDRRLNW-------QECEPLQQAIAQAE---------- 417 (465)
T ss_pred HHHHHHHhC--------CCHHHHHHhHHHhCCceEEEeeccccchhhhh-------hcChhHHHHHHHHH----------
Confidence 999987653 4599999986432222222333321 1555 23466776654210
Q ss_pred ccccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 395 VNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 395 ~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
+++ .++||+|||||||||+||||+||.|++.++++++.+.++|+++++
T Consensus 418 ------~~~-~~~gW~liRpS~TEP~irv~~Ea~~~~~~~~l~~~~~~~v~~~~~ 465 (465)
T PRK14317 418 ------AAM-GDTGRVLVRASGTEPLIRVMVEAEDAELVNHWTNHLVAVVQQHLN 465 (465)
T ss_pred ------Hhh-cCCceEEEecCCCCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHhC
Confidence 112 257899999999999999999999999999999999999998653
No 12
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Probab=100.00 E-value=9.4e-75 Score=609.27 Aligned_cols=412 Identities=21% Similarity=0.245 Sum_probs=319.2
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKD 77 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~ 77 (462)
||++++++||+++|++|+++ |.+|||+++|+++..+. .+++|.+||||||||||++||||||++++|.++.++.++
T Consensus 92 ~~~~a~a~gL~s~Gi~V~~~~~~G~~pTP~~~~av~~~~~-~~~~~~gGI~ITASHNP~e~NGiK~~~~~G~~i~~~~~~ 170 (543)
T TIGR01132 92 PAFISVLEVLAANGVEVIVQENNGFTPTPAVSHAILTHNK-KGEPLADGIVITPSHNPPEDGGIKYNPPNGGPADTEATQ 170 (543)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHHHhcc-cccccceEEEEeCCCCCCccCeEEEECCCCCCCChHHHH
Confidence 68999999999999999984 89999999999973210 012378899999999999999999999999999888777
Q ss_pred HHHHHHHHhhhhhhccccccc--c-cCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHH
Q 012505 78 ILERAADIYKQFMVEGLTNLE--K-QTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKV 154 (462)
Q Consensus 78 ~ie~~~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~l 154 (462)
.+|+..........+++.... . ...+.+...+..+.|++.+.+.++.+. ++.+++|||+||+||+++.+++++
T Consensus 171 ~Ie~~i~~~~~~~~e~~~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~i~~~~----i~~~~lkVvvD~~~Ga~~~~~~~i 246 (543)
T TIGR01132 171 AIEDRANALLANGLKGVKRLPLAQALASGTVKAHDLVQPYVDGLADIVDMAA----IQKAGLRLGVDPLGGSGIDYWKRI 246 (543)
T ss_pred HHHHHHHHhhhcccccccccChhhhhccCceecCCcHHHHHHHHHHhhhhhh----hhcCCceEEEeCCCCCcHHHHHHH
Confidence 777643211000001110000 0 112334444788999999998876432 345689999999999999999999
Q ss_pred HhhcCCccccccccccCCCCCCCCCCCC--------cHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchh
Q 012505 155 LEPLGAKTSGSQFLEPDGMFPNHIPNPE--------DKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNR 226 (462)
Q Consensus 155 l~~lg~~v~~~~~~~~d~~f~~~~p~P~--------~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~ 226 (462)
|++|||+++ .+|+.+||.||.++|+|+ .++++..+.+ ++.++|+|+++||||||++++|++| ++++|+
T Consensus 247 l~~lG~~v~-~l~~~~d~~f~~~~pd~~~~~~~~~~~~e~l~~l~~--~~~~aDlGia~DgDaDR~~vvd~~g-~i~gd~ 322 (543)
T TIGR01132 247 AEKYNLNLT-LVNPQVDPTFRFMTLDKDGKIRMDCSSPYAMAGLLA--LRDKYDLAFGNDPDYDRHGIVTPAG-LMNPNH 322 (543)
T ss_pred HHHcCCCEE-EEcCeeCCCCCCCCCCcccccCCCCCCHHHHHHHhh--cccCCCEEEEeCCCCCCeeEEecCc-eeCHHH
Confidence 999999998 689999999998766422 2355555554 5889999999999999999999996 699999
Q ss_pred HHHHHHHHHHHhCC---CC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEe
Q 012505 227 LIALMSAIVLEEHP---GT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGAL 302 (462)
Q Consensus 227 ~~~Ll~~~~l~~~~---~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~ 302 (462)
+++|+++++++..+ +. .|+.+.+|| .+++.+++++|++++||||||+||+++|.+.+ ++||||+|||++|
T Consensus 323 ~~aLla~~ll~~~~~~~~~~~Vv~tv~sS-~~l~~ia~~~g~~v~~t~vG~k~i~~~m~~~~-----~~~ggEeSgg~~~ 396 (543)
T TIGR01132 323 YLAVAINYLFQHRPQWGGDVAVGKTLVSS-AMIDRVVADLGRQLVEVPVGFKWFVDGLFDGS-----FGFGGEESAGASF 396 (543)
T ss_pred HHHHHHHHHHHhCcccCCCceEEEEeccH-HHHHHHHHHcCCceeecCccHHHHHHHHhcCC-----eEEEEeccCceEe
Confidence 99999999998753 33 355444455 57778889999999999999999999998754 5799999999999
Q ss_pred cC-----CcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccce-eeeeecccCccccCCcccchhHHH
Q 012505 303 KE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLKIDQNHSDLKGGSFRDYGEAV 376 (462)
Q Consensus 303 ~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~v 376 (462)
++ +.+.+||+++++++|++|+..+ ++|+++++++|+++.... .+.+++ |+| ..++.+
T Consensus 397 ~~~~~~~~~~~~Dgi~a~l~ile~la~~~--------~~L~~ll~~lp~~~~~~~~~~~~~~--~~~-------~~k~~~ 459 (543)
T TIGR01132 397 LRFDGTPWSTDKDGIIMCLLAAEITAVTG--------KNPQQHYNELAAKFGAPSYNRIQAP--ATS-------AQKARL 459 (543)
T ss_pred cccCCCCcccCcHHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceEEEEecC--ChH-------HHHHHH
Confidence 55 7788999999999999988643 459999999997643322 234455 877 334444
Q ss_pred HHHHHhhhc---CCCCCC---------CCCccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHHHHHHH
Q 012505 377 LKHLENRVD---SDPKLQ---------KAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAA 443 (462)
Q Consensus 377 ~~~l~~~~~---~~~~~~---------~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~~~~~~ 443 (462)
+++.+... ...+.. ..+..+|| +|+++++||+|||||||||+||||+|| .|++.++++++.+.++
T Consensus 460 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DG-vki~~~~gWvliRpSgTEP~irvy~Ea~~~~~~~~~l~~~~~~~ 537 (543)
T TIGR01132 460 -KKLSPEMVSATTLAGDPITARLTAAPGNGAAIGG-LKVTTDNGWFAARPSGTEDVYKIYCESFKGEEHLKQIEKEAVEI 537 (543)
T ss_pred -HHHhccCCChHHhCCceeEEEEeccCCCCccCCe-EEEEEcCcEEEEecCCCCceEEEEEEecCCHHHHHHHHHHHHHH
Confidence 77864221 011111 12445899 999988899999999999999999999 6999999999999999
Q ss_pred hhc
Q 012505 444 TKE 446 (462)
Q Consensus 444 i~~ 446 (462)
|+.
T Consensus 538 v~~ 540 (543)
T TIGR01132 538 VSE 540 (543)
T ss_pred HHH
Confidence 986
No 13
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.5e-74 Score=595.92 Aligned_cols=386 Identities=27% Similarity=0.341 Sum_probs=316.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|++. .++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 54 ~l~~a~~~gL~s~Gv~V~~~g~~pTP~~~~a~~------~~~~~gGI~ITaShnp~~~ngiK~~~~~G~~i~~~~~~~ie 127 (443)
T PRK10887 54 MLESALEAGLAAAGVDVLLTGPMPTPAVAYLTR------TLRAEAGIVISASHNPYYDNGIKFFSADGTKLPDEVELAIE 127 (443)
T ss_pred HHHHHHHHHHHHCCCeEEEECCcChHHHHHHHH------HcCCCEEEEEecCCCCcccCeEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 56899999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+... +.+.+.. ....+.+... +..+.|++++.+.++.. ++.+++|||+||+||+++.+++.+|++||
T Consensus 128 ~~~~--~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~id~~-----i~~~~~kVvvD~~~G~~~~~~~~ll~~lG 195 (443)
T PRK10887 128 AELD--KPLTCVE-----SAELGKASRINDAAGRYIEFCKSTFPNE-----LSLRGLKIVVDCANGATYHIAPNVFRELG 195 (443)
T ss_pred HHHh--CcCCccc-----cccCceEEEcCChHHHHHHHHHHhcCcc-----cccCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 6542 1221100 1122445544 57788999998887521 23569999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||...|.|+ +++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 196 ~~v~-~~n~~~dg~~~~~~~~~~---~l~~l~~~v~~~~adlGia~D~DgDRl~~vd~~G~~i~~d~l~~l~~~~ll~~~ 271 (443)
T PRK10887 196 AEVI-AIGCEPNGLNINDECGAT---DPEALQAAVLAEKADLGIAFDGDGDRVIMVDHLGNLVDGDQLLYIIARDRLRRG 271 (443)
T ss_pred CeEE-EEeccCCCCCCCCCCCCC---CHHHHHHHHHhcCCCeeeEECCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhC
Confidence 9998 689999999987666654 578899999999999999999999999999999999999999999999999876
Q ss_pred C-CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHH
Q 012505 240 P-GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (462)
Q Consensus 240 ~-~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (462)
+ .++||.+.. |+.+++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||+++++++
T Consensus 272 ~~~~~vv~~v~-ss~~~~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~i 345 (443)
T PRK10887 272 QLRGGVVGTLM-SNMGLELALKQLGIPFVRAKVGDRYVLEKLQEKG-----WRLGGENSGHILCLDKTTTGDGIVAALQV 345 (443)
T ss_pred CCCCcEEEEec-cchHHHHHHHHcCCcEEEcCCchHHHHHHHHhcC-----cEEEEecccceeccCccccCcHHHHHHHH
Confidence 4 345775554 5557777889999999999999999999998755 47999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCcccc
Q 012505 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (462)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (462)
|++|+..+ ++|+++++++|.++.. +.+++ |+.... ...+++.|++..+.. +
T Consensus 346 le~la~~~--------~~Ls~l~~~~~~~~~~---~~~v~--~~~~~~---~~~~~~~~~~~~~~~-------------~ 396 (443)
T PRK10887 346 LAAMVRSG--------MSLADLCSGMKLFPQV---LINVR--FKPGAD---DPLESEAVKAALAEV-------------E 396 (443)
T ss_pred HHHHHHhC--------CCHHHHHhhcccccce---EEEEE--eccccc---cccchHHHHHHHHHH-------------H
Confidence 99998753 4699999999986433 22344 541000 022445565543321 0
Q ss_pred ceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 399 GQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 399 G~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
+++ .++||+|||||+|||+||||+||.|++.+++|++.+.++|++
T Consensus 397 --~~~-~~dgWvLiRpS~tEP~iri~~Ea~s~e~a~~l~~~~~~~v~~ 441 (443)
T PRK10887 397 --AEL-GGRGRVLLRKSGTEPLIRVMVEGEDEAQVTALAERIADAVKA 441 (443)
T ss_pred --HHh-CCCeEEEEecCCCCeEEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 111 247999999999999999999999999999999999999975
No 14
>PRK07564 phosphoglucomutase; Validated
Probab=100.00 E-value=1.1e-74 Score=608.72 Aligned_cols=409 Identities=21% Similarity=0.249 Sum_probs=321.4
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCC-----CCeEEEEcCCCCCCCCCeeeEEcCCCCCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCP-----VDGAIMITASHLPYNRNGLKFFTNAGGLGK 72 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~-----a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~ 72 (462)
||++++++||+++|++|+++ |.+|||+++|+++ +++ |+|||||||||||++||||||++++|.++.
T Consensus 91 ~~a~a~a~gL~s~Gi~V~~~~~~g~~pTP~~~~av~------~~~~~~~~~~gGImITASHNP~e~NGiK~~~~~G~~i~ 164 (543)
T PRK07564 91 PAIQSALEVLAANGVGVVIVGRGGYTPTPAVSHAIL------KYNGRGGGLADGIVITPSHNPPEDGGIKYNPPNGGPAD 164 (543)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHH------HhCCCccccceeEEEecCCCCcccCeEEEECCCCCcCC
Confidence 68999999999999999966 8999999999997 456 899999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhhhhhccccc--cccc-CCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchH
Q 012505 73 PDIKDILERAADIYKQFMVEGLTN--LEKQ-TSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGF 149 (462)
Q Consensus 73 ~~~~~~ie~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~ 149 (462)
++.++.||..+........+++.. +... ..+.+...+..+.|++++.+.++.+. ++.+++|||+||+||+++.
T Consensus 165 ~~~~~~Ie~~~~~~~~~~~e~~~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~i~~~~----i~~~~lkIvvD~~~G~~~~ 240 (543)
T PRK07564 165 TDVTDAIEARANELLAYGLKGVKRIPLDRALASMTVEVIDPVADYVEDLENVFDFDA----IRKAGLRLGVDPLGGATGP 240 (543)
T ss_pred hHHHHHHHHHHHhhhhcccccccccChhHhccCCcEEecccHHHHHHHHHHhhChhh----hhcCCceEEEecCCCCcHH
Confidence 888777776542111000111100 0000 11345555788999999988875322 2346899999999999999
Q ss_pred HHHHHHhhcCCccccccccccCCCCC--------CCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCcc
Q 012505 150 FAAKVLEPLGAKTSGSQFLEPDGMFP--------NHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHE 221 (462)
Q Consensus 150 ~~~~ll~~lg~~v~~~~~~~~d~~f~--------~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~ 221 (462)
+++++|++|||+++ .+|+.+||.|+ ++.|||+.+++|..+.+ ++.++|+|+++||||||++++|+ |++
T Consensus 241 ~~~~ll~~lG~~v~-~l~~~~d~~f~~~~~~~~~~~~p~P~~~~~L~~l~~--~~~~adlGia~DgDgDRl~vvd~-G~~ 316 (543)
T PRK07564 241 YWKAIAERYGLDLT-VVNAPVDPTFNFMPLDDDGKIRMDCSSPYAMAGLLA--LKDAFDLAFANDPDGDRHGIVTP-GGL 316 (543)
T ss_pred HHHHHHHHcCCcEE-EeCCcCCCCCCCCCCCccCCcCCCCChHHHHHHHHh--hccCCCEEEEECCCCCceeEEec-Cee
Confidence 99999999999998 68999999884 56799988776555544 57799999999999999999999 999
Q ss_pred ccchhHHHHHHHHHHHhCC----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeee
Q 012505 222 LNRNRLIALMSAIVLEEHP----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETS 297 (462)
Q Consensus 222 l~~d~~~~Ll~~~~l~~~~----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~s 297 (462)
+++|++++|+++++++..+ +..||. +++|+.+++.+++++|+++++|+|||+|++++|.+.+ ++||||+|
T Consensus 317 i~~d~~~alla~~ll~~~~~~~~~~~Vv~-~v~sS~~l~~ia~~~g~~v~~t~vG~k~i~~~m~~~~-----~~~ggEeS 390 (543)
T PRK07564 317 MNPNHYLAVAIAYLFHHRPGWRAGAGVGK-TLVSSAMIDRVAAKLGRKLYEVPVGFKWFVNGLDDGS-----LGFGGEES 390 (543)
T ss_pred echhHHHHHHHHHHHHhCcCCCCCceEEE-EecchHHHHHHHHHhCCeeeecchHHHHHHHHHhcCc-----eEEEecCc
Confidence 9999999999999987543 225664 5556667888999999999999999999999998753 57999999
Q ss_pred cceEecC-----CcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCccc-ceeeeeecccCccccCCcccc
Q 012505 298 GHGALKE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFA-VELRLKIDQNHSDLKGGSFRD 371 (462)
Q Consensus 298 G~~~~~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~-~~~~~~v~~~~~~~~~~~~~~ 371 (462)
||++|.. +.+.+||+++++++|++|+..+ ++|++++++||++|.. ...+..+. |+| +
T Consensus 391 gg~~~~~~~~~~~~~~~Dgi~a~l~ile~la~~~--------~~L~ell~~l~~~~g~~~~~~~~~~--~~~-------~ 453 (543)
T PRK07564 391 AGASFLRRDGSVWTTDKDGLIAVLLAAEILAVTG--------KSPSEIYRELWARFGRPYYSRHDAP--ATP-------E 453 (543)
T ss_pred CCeeecccCCCCccccchHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceEEEecCC--ccH-------H
Confidence 9986633 5778999999999999988643 4699999999974322 23344454 776 3
Q ss_pred hhHHHHHHHHhhhc---CCCCCCC--CC-------ccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHH
Q 012505 372 YGEAVLKHLENRVD---SDPKLQK--AP-------VNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGL 438 (462)
Q Consensus 372 ~~~~v~~~l~~~~~---~~~~~~~--~~-------~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~ 438 (462)
.++. |+++.+... ...+.++ .+ ..+|| ||+.+++||+|||||||||+||||+|+ .+.+.++++++
T Consensus 454 ~k~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DG-lki~~~~gWvlvRpSgTEP~iriy~Ea~~~~~~~~~l~~ 531 (543)
T PRK07564 454 QKAA-LRKLSPELVGATELAGDPIDASLTEAPGNGAAIGG-LKVVTENGWFAARPSGTETTYKIYAESFEGDEHLHQIQK 531 (543)
T ss_pred HHHH-HHHHhccCCCchhhCCcceEEEEecCcCCcccCCe-EEEEEcCCEEEEEccCCCCeEEEEEEecCCHHHHHHHHH
Confidence 3444 788865321 1111111 11 13789 999988889999999999999999999 69999999999
Q ss_pred HHHHHhhcCC
Q 012505 439 AVAAATKEFP 448 (462)
Q Consensus 439 ~~~~~i~~~~ 448 (462)
.+.+.|+.++
T Consensus 532 ~~~~~~~~~~ 541 (543)
T PRK07564 532 EAQEIVADLI 541 (543)
T ss_pred HHHHHHHHHh
Confidence 9999998743
No 15
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1e-74 Score=606.86 Aligned_cols=406 Identities=21% Similarity=0.235 Sum_probs=316.6
Q ss_pred CHHHHHHHHHHhCCCcEEE---eCCCChhhhhhhhcccCCcccCCCC------eEEEEcCCCCCCCCCeeeEEcCCCCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQ---YGLASTPAMFNSTLTEGDAFFCPVD------GAIMITASHLPYNRNGLKFFTNAGGLG 71 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~---~g~~ptP~~~~a~~~~~~~~~l~a~------gGI~ITaSHnp~~~nGiK~~~~~G~~~ 71 (462)
++++++++||+++|++|++ +|.+|||+++|+++ +++++ |||||||||||++||||||++++|.++
T Consensus 74 ~~~~~~~~gL~s~Gi~V~~~~~~g~~pTP~~~~av~------~~~~~~~~~~~gGI~ITASHNP~~~NGiK~~~~~G~~~ 147 (522)
T cd05801 74 PAFISALEVLAANGVEVIIQQNDGYTPTPVISHAIL------TYNRGRTEGLADGIVITPSHNPPEDGGFKYNPPHGGPA 147 (522)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCCchHHHHHHH------HhccccccCCCcEEEEECCCCCcccCEEEEECCCCCCC
Confidence 4677788999999999995 78999999999997 44554 699999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhhhhccccc--cccc-CCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCch
Q 012505 72 KPDIKDILERAADIYKQFMVEGLTN--LEKQ-TSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGG 148 (462)
Q Consensus 72 ~~~~~~~ie~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~ 148 (462)
.+++++.+|........-..+++.. .... ..+.+...++.+.|++.+.+.++.+. ++.+++|||+||+||+++
T Consensus 148 ~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~~v~~~~----~~~~~lkVvvd~~~G~~~ 223 (522)
T cd05801 148 DTDITRWIEKRANALLANGLKGVKRIPLEAALASGYTHRHDFVTPYVADLGNVIDMDA----IRKSGLRLGVDPLGGASV 223 (522)
T ss_pred CHHHHHHHHHhhhhhhhcccccccccchhhhhccCceecCCcHHHHHHHHHHhhChhh----hhcCCceEEEeCCCCccH
Confidence 9888888876432110000011100 0000 12334444788999999988875322 344689999999999999
Q ss_pred HHHHHHHhhcCCccccccccccCCCCCCCCC--------CCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCc
Q 012505 149 FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIP--------NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGH 220 (462)
Q Consensus 149 ~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p--------~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~ 220 (462)
.+++++|++|||+++ .+|+.|||.||.++| +|+.+++|+.+.+. ..++|+||++||||||++++|++|+
T Consensus 224 ~~~~~ll~~lG~~v~-~l~~~~d~~f~~~~p~~~~~~~~~p~~~~~l~~l~~~--~~~adlGia~DgDaDRl~vvd~~G~ 300 (522)
T cd05801 224 PYWQPIAEKYGLNLT-VVNPKVDPTFRFMTLDHDGKIRMDCSSPYAMAGLLKL--KDKFDLAFANDPDADRHGIVTPSAG 300 (522)
T ss_pred HHHHHHHHHcCCCEE-EEcCeeCCCCCCCCCCcccCCCCCCCCHHHHHHHHHh--hcCCCEEEEECCCccceeEEecCCe
Confidence 999999999999988 689999999997655 45557778777776 3489999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHhCC----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeee
Q 012505 221 ELNRNRLIALMSAIVLEEHP----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIET 296 (462)
Q Consensus 221 ~l~~d~~~~Ll~~~~l~~~~----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~ 296 (462)
+|++|++++|+++++++..+ +..||.+.+||. +++.+++++|+++++|+||||||.++|++.. .+||||+
T Consensus 301 ~l~gd~~~aLla~~ll~~~~~~~~~~~vv~tv~sS~-~l~~ia~~~g~~~~~t~vG~k~i~~~m~~~~-----~~~ggEe 374 (522)
T cd05801 301 LMNPNHYLSVAIDYLFTHRPLWNKSAGVGKTLVSSS-MIDRVAAALGRKLYEVPVGFKWFVDGLLDGS-----LGFGGEE 374 (522)
T ss_pred EECHHHHHHHHHHHHHHhCcccCCCceEEEEcchHH-HHHHHHHHcCCeeeecCccHHHHHHHHhcCC-----eEEEEec
Confidence 99999999999999998754 446887766665 7777889999999999999999999998754 4699999
Q ss_pred ecceEecC-----CcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCc-ccceeeeeecccCccccCCccc
Q 012505 297 SGHGALKE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPG-FAVELRLKIDQNHSDLKGGSFR 370 (462)
Q Consensus 297 sG~~~~~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~-~~~~~~~~v~~~~~~~~~~~~~ 370 (462)
|||++|++ +.+.+||++++++++++|+..+ ++|++++++||+++ .....+.++. |+|
T Consensus 375 Sgg~~~~~~~~~~~~~~~Dgi~a~l~~le~la~~~--------~~L~~~l~~l~~~~g~~~~~~~~v~--~~~------- 437 (522)
T cd05801 375 SAGASFLRRDGTVWTTDKDGIIMCLLAAEILAVTG--------KDPGQLYQELTERFGEPYYARIDAP--ATP------- 437 (522)
T ss_pred cCceEeccCCCCCcccCchHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHCcCeeeccCCC--ChH-------
Confidence 99999987 7788999999999999988643 46999999998654 2333344555 776
Q ss_pred chhHHHHHHHHhh-hc-CCCCCC---------CCCccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHH
Q 012505 371 DYGEAVLKHLENR-VD-SDPKLQ---------KAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGL 438 (462)
Q Consensus 371 ~~~~~v~~~l~~~-~~-~~~~~~---------~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~ 438 (462)
+.++.+++.+.+. .. ...+.. ..+..+|| +|+++++||+|||||||||+||||+|+ .|++.++++++
T Consensus 438 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DG-vk~~~~~gWvliRpSgTEP~iriy~Ea~~~~~~~~~l~~ 516 (522)
T cd05801 438 EQKARLKKLSPEQVTATELAGDPILAKLTRAPGNGASIGG-LKVTTANGWFAARPSGTEDVYKIYAESFLSEEHLKKIQK 516 (522)
T ss_pred HHHHHHHHHhccCCCchHhCCCceEEEEecccCCCccCce-EEEEEcCeEEEEEccCCCceEEEEEEecCCHHHHHHHHH
Confidence 3344554333321 00 011110 02335899 999988899999999999999999999 69999999998
Q ss_pred HHHHH
Q 012505 439 AVAAA 443 (462)
Q Consensus 439 ~~~~~ 443 (462)
.+.++
T Consensus 517 ~~~~~ 521 (522)
T cd05801 517 EAQEI 521 (522)
T ss_pred HHHHh
Confidence 87764
No 16
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.9e-74 Score=595.97 Aligned_cols=383 Identities=24% Similarity=0.289 Sum_probs=316.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.++.++.++.++
T Consensus 57 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~------~~~~~gGi~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 130 (448)
T PRK14315 57 MIENALVAGFTSVGMDVLLLGPIPTPAVAMLTR------SMRADLGVMISASHNPFEDNGIKLFGPDGFKLSDEIELEIE 130 (448)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcccHHHHHHHH------hcCCCEEEEEEcCCCCcccCCEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999998888777777
Q ss_pred HHHHHhhhhh--hcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012505 81 RAADIYKQFM--VEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (462)
Q Consensus 81 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~ 157 (462)
+... +.+. +.. ....+.+... ++.+.|++++.+.++.. ++.+++|||+||+||+++.+++.+|++
T Consensus 131 ~~~~--~~~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~id~~-----i~~~~lkVvvD~~~G~~~~~~~~ll~~ 198 (448)
T PRK14315 131 ALLD--GDLDKRLAA-----PADIGRAKRIDDAHGRYIEFAKRTLPRD-----LRLDGLRVVVDCANGAAYKVAPEALWE 198 (448)
T ss_pred HHHh--ccccccccc-----cccCcceEEecchHHHHHHHHHHhcccc-----cccCCCEEEEECCCchHHHHHHHHHHH
Confidence 6542 1111 100 1123556555 57888999998887521 345799999999999999999999999
Q ss_pred cCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHH
Q 012505 158 LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237 (462)
Q Consensus 158 lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~ 237 (462)
|||+++ .+|+.|||.||.+.|.|+ +++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++
T Consensus 199 lG~~v~-~i~~~~dg~~~~~~~~~~---~l~~l~~~v~~~~adlGia~DgDgDR~~ivd~~G~~i~~d~~~~l~a~~ll~ 274 (448)
T PRK14315 199 LGAEVI-TIGVEPNGFNINEECGST---HPEALAKKVREVRADIGIALDGDADRVIIVDEKGHVVDGDQLMALIAESWAE 274 (448)
T ss_pred cCCeEE-EeccCCCCCCCCCCCCCC---CHHHHHHHHHHcCCCEEEEEcCCCceEEEEcCCCcEeCHHHHHHHHHHHHHH
Confidence 999998 689999999987666554 4678999999999999999999999999999999999999999999999998
Q ss_pred hC--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHH
Q 012505 238 EH--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLM 315 (462)
Q Consensus 238 ~~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa 315 (462)
.+ ++.+||.++.|| .+++.+++++|+++++||||++|++++|.+.+ ++||||+|||++|+++.+.+||++++
T Consensus 275 ~~~~~~~~vV~~v~ss-~~i~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~f~~~~~~~Dgi~a~ 348 (448)
T PRK14315 275 DGRLRGGGIVATVMSN-LGLERFLADRGLTLERTAVGDRYVVEHMREGG-----FNLGGEQSGHIVLSDYATTGDGLVAA 348 (448)
T ss_pred hCCCCCCeEEEEecCC-hHHHHHHHHcCCeEEEeCChHHHHHHHHHhCC-----CceeecccccEeecccCCCCcHHHHH
Confidence 65 445687665555 57777889999999999999999999998755 47999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCc
Q 012505 316 VKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPV 395 (462)
Q Consensus 316 ~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~ 395 (462)
+++|++|+..+ ++|+++++++|.++... .++. |+.- . ... .+.+.+
T Consensus 349 l~lle~la~~~--------~~L~~l~~~~~~~~~~~---~~~~--~~~~--~-~~~-----~~~~~~------------- 394 (448)
T PRK14315 349 LQVLAVVVRSG--------RPASEVCRRFEPVPQLL---KNVR--YSGG--K-PLE-----DASVKS------------- 394 (448)
T ss_pred HHHHHHHHHhC--------CCHHHHhhhcCcCCeee---eEEe--cCCc--c-cCC-----CHHHHH-------------
Confidence 99999998653 45999999999764322 2333 5420 0 000 011111
Q ss_pred cccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 396 NYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 396 ~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
.+|| +|+.. ++||+|||||||||+||||+||+|++.+++|++.+.++|+.
T Consensus 395 ~~~~-~~~~~~~~gWvLiRpS~teP~iri~~Ea~s~~~~~~l~~~~~~~i~~ 445 (448)
T PRK14315 395 AIAD-AEARLNGSGRLLIRPSGTEPLIRVMAEGDDRALVEEVVDEIVDAVSA 445 (448)
T ss_pred HHHH-HHHHhcCCcEEEEecCCCCcEEEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 2456 66554 58999999999999999999999999999999999999975
No 17
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=4.5e-74 Score=592.04 Aligned_cols=389 Identities=24% Similarity=0.294 Sum_probs=311.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 54 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~------~~~~~gGI~ITaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie 127 (446)
T PRK14324 54 MIENALVSGLTSVGYNVIQIGPMPTPAIAFLTE------DMRCDAGIMISASHNPYYDNGIKFFDSYGNKLDEEEEKEIE 127 (446)
T ss_pred HHHHHHHHHHHHCCCeEEEecCccHHHHHHHHh------hcCCceEEEEEcCCCChhHCCEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.+... .+.... .......+.+... ++.+.|++++.+.++.. ...+++|||+||+||+++.+++.+|++||
T Consensus 128 ~~~~~~-~~~~~~--~~~~~~~g~~~~~~~~~~~Y~~~l~~~i~~~-----~~~~~lkVvvD~~nGa~~~~~~~ll~~lG 199 (446)
T PRK14324 128 EIFFDE-ELIQSS--QKTGEEIGSAKRIDDVIGRYIVHIKNSFPKD-----LTLKGLRIVLDTANGAAYKVAPTVFSELG 199 (446)
T ss_pred HHHhcc-cccccc--ccchhhCeeeEecccHHHHHHHHHHHhcCCc-----cCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654211 110000 0000123445545 57888999998887532 23468999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|+|+.+ +.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 200 ~~v~-~i~~~~dg~~~~~~~~~~~~---e~l~~~v~~~~adlGia~DgDgDR~~vvd~~G~~l~~d~~~~l~a~~ll~~~ 275 (446)
T PRK14324 200 ADVI-VINDEPNGFNINENCGALHP---ENLAQEVKRYRADIGFAFDGDADRLVVVDEKGEIVHGDKLLGVLAVYLKEKG 275 (446)
T ss_pred CeEE-EECCCCCCCCCCCCCCCCCH---HHHHHHHHhCCCCEEEEECCCCceEEEECCCCCEeCHHHHHHHHHHHHHHhC
Confidence 9998 68999999999877776654 4678899999999999999999999999999999999999999999999875
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
++..||.+..||. +++.+++++|+++++|||||+|++++|.+.+ .+||||+|||++|+++.+.+||++++++
T Consensus 276 ~~~~~~VV~~v~ss~-~l~~ia~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 349 (446)
T PRK14324 276 ALKSQAIVATVMSNL-ALEEYLKKHGIELKRCNVGDKYVLECMKENG-----INFGGEQSGHIIFSDYAKTGDGLVSALQ 349 (446)
T ss_pred CCCCCeEEEEecCCh-HHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CEEEEcCcccEEecCcCCCCcHHHHHHH
Confidence 4456776555555 6777889999999999999999999998865 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (462)
+|++|+... ++|+++++++|.+... ..++++. .+. .+ ..++.+.+.. . ..
T Consensus 350 lle~la~~~--------~~ls~l~~~~~~~~~~-~~~~~~~--~~~----~~-----~~~~~~~~~~--------~--~~ 399 (446)
T PRK14324 350 VSALMLESK--------KKASEALNPFELYPQL-LVNLKVQ--EKK----PL-----EKIKGLKELL--------K--EL 399 (446)
T ss_pred HHHHHHHcC--------CCHHHHHHhhhhcCce-eEEEeeC--Ccc----cc-----ccCHHHHHHH--------H--HH
Confidence 999998653 4699999999975322 2233332 110 00 0011221100 0 01
Q ss_pred cceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 398 EGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 398 dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
| .|++|+|||||||||++|||+||.|++.++++++.+.+.|++.++
T Consensus 400 ~------~dg~~~lvR~SgTEp~irv~~Ea~~~~~~~~l~~~~~~~~~~~~~ 445 (446)
T PRK14324 400 E------KLGIRHLIRYSGTENKLRILLEGKDEKLLEKKMQELVEFFKKALN 445 (446)
T ss_pred h------cCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHhc
Confidence 1 234699999999999999999999999999999999999987654
No 18
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=100.00 E-value=1.3e-74 Score=605.64 Aligned_cols=427 Identities=22% Similarity=0.247 Sum_probs=323.8
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCC---CCCCeeeEEcCCCCCCCHH
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLP---YNRNGLKFFTNAGGLGKPD 74 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp---~~~nGiK~~~~~G~~~~~~ 74 (462)
+|+++++++|+++|++|+++ |.+|||+++|+++ +++|+||||||||||| ++||||||++++|.++.++
T Consensus 64 ~~a~~~a~~L~~~G~~V~~~~~~G~~pTP~l~fav~------~~~a~gGImITASHNP~~~~eyNGiK~~~~~G~~i~~~ 137 (548)
T cd03085 64 EAIQIIIKIAAANGVGKVVVGQNGLLSTPAVSAVIR------KRKATGGIILTASHNPGGPEGDFGIKYNTSNGGPAPES 137 (548)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCccCchHHHHHHH------hcCCCeEEEEecCCCCCCCCcCCcEEEecCCCCcCCcH
Confidence 58999999999999999999 7999999999997 6789999999999999 7999999999999998887
Q ss_pred HHHHHHHHHHHhhhhhhcccccccccCCcc---------eEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCC
Q 012505 75 IKDILERAADIYKQFMVEGLTNLEKQTSTS---------IKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNG 145 (462)
Q Consensus 75 ~~~~ie~~~~~~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G 145 (462)
.+..++...+..+...++++........+. ....+..+.|++.+.+.++.+.+......+++|||+||+||
T Consensus 138 ~~~~I~~~i~~ie~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~d~~~~Yi~~l~~~v~~~~i~~~~~~~~lkVVvD~~nG 217 (548)
T cd03085 138 VTDKIYEITKKITEYKIADDPDVDLSKIGVTKFGGKPFTVEVIDSVEDYVELMKEIFDFDAIKKLLSRKGFKVRFDAMHG 217 (548)
T ss_pred HHHHHHHHHHhccccccccccccChhhcCceeecccCCceEEecCHHHHHHHHHhhhCHHHHhhhcccCCCEEEEeCCcc
Confidence 665554332211111122210000011121 23346789999999887743211100013689999999999
Q ss_pred CchHHHHHHHh-hcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccc
Q 012505 146 AGGFFAAKVLE-PLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNR 224 (462)
Q Consensus 146 ~~~~~~~~ll~-~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~ 224 (462)
+++.+++.+|+ +|||+++..+|+.|||.||++.|||+ ++++..+.+.|++.+||+|+++||||||++++|+ |+++.+
T Consensus 218 ag~~~~~~lL~~~LG~~~v~~i~~~pDg~Fp~~~P~P~-~~~l~~L~~~V~~~~ADlGia~DgDaDRl~vvd~-G~~i~~ 295 (548)
T cd03085 218 VTGPYAKKIFVEELGAPESSVVNCTPLPDFGGGHPDPN-LTYAKDLVELMKSGEPDFGAASDGDGDRNMILGK-GFFVTP 295 (548)
T ss_pred hhHHHHHHHHHHhcCCCceEEEeCeeCCCCCCCCCCCc-HHHHHHHHHHHhccCCCEEEEECCCCCceEEEec-CEEecC
Confidence 99999999996 79998632589999999999999999 6889999999999999999999999999999999 999999
Q ss_pred hhHHHHHHHHHHHh----CCC-CeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc
Q 012505 225 NRLIALMSAIVLEE----HPG-TTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH 299 (462)
Q Consensus 225 d~~~~Ll~~~~l~~----~~~-~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~ 299 (462)
++++++++.+++.. .++ ..||.+ ++|+.+++.+++++|+++++|+|||+||.++|.+.. ++||||+|||
T Consensus 296 d~~lall~~~ll~~~~~~~~~~~~VV~t-v~sS~~le~ia~~~G~~v~~t~vG~k~I~~~m~~~~-----~~~GgEeSgg 369 (548)
T cd03085 296 SDSVAVIAANAKLIPYFYKGGLKGVARS-MPTSGALDRVAKKLGIPLFETPTGWKFFGNLMDAGK-----LSLCGEESFG 369 (548)
T ss_pred CHHHHHHHHHHHHhhhhhhcCCcEEEEe-CccHHHHHHHHHHcCCcEEEcCchHHHHHHHHhcCC-----ceEEEeccCC
Confidence 99999999888752 223 357754 455557788999999999999999999999998753 5799999999
Q ss_pred eEecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccce-eeeeecccCccccCCcccchhHHHHH
Q 012505 300 GALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLKIDQNHSDLKGGSFRDYGEAVLK 378 (462)
Q Consensus 300 ~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~v~~ 378 (462)
++ +++.+.+||+++++++|++|+..+ ++|++++++||+.|.... .+.... .|+| +.++++|+
T Consensus 370 ~~-~~~~~~kDGi~aal~llella~~g--------~tLsell~~i~~~~G~~~~~~~~~~-~~~~-------~~k~~im~ 432 (548)
T cd03085 370 TG-SDHIREKDGLWAVLAWLSILAHRN--------VSVEDIVKEHWQKYGRNFYTRYDYE-EVDS-------EAANKMMD 432 (548)
T ss_pred cc-CCCccCCcHHHHHHHHHHHHHHHC--------cCHHHHHHHHHHHhCcceeeccccc-CCCH-------HHHHHHHH
Confidence 86 888889999999999999888743 459999999996532211 122222 1787 56789999
Q ss_pred HHHhhh----cC----CCCCCC--------------CCccccceEEEEec-CeEEEEeecCCC---ceeEEEEeeCCHHH
Q 012505 379 HLENRV----DS----DPKLQK--------------APVNYEGQVRVSGS-GGWFLLRLSLHD---PVLPLNIEAPSRED 432 (462)
Q Consensus 379 ~l~~~~----~~----~~~~~~--------------~~~~~dG~iki~~~-~~wvliRpSgTE---P~irvy~Ea~~~~~ 432 (462)
+|.+.. .. ..++++ .+...|| +|++++ ++|+++|||||| |+||+|+|+.+++-
T Consensus 433 ~l~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~dg-lk~~~~~g~wi~iRpSGTE~~~Pkir~Y~E~~~~~~ 511 (548)
T cd03085 433 HLRALVSDLPGVGKSGDKGYKVAKADDFSYTDPVDGSVSKKQG-LRIIFEDGSRIIFRLSGTGSSGATIRLYIESYEKDP 511 (548)
T ss_pred HHHhccccCccccccccCCceEEEEecceeccCCCCCcChhce-EEEEECCCeEEEEECCCCCCCCceEEEEEEEecCCh
Confidence 997521 00 112111 1334688 999965 679999999999 89999999988654
Q ss_pred HHHHHHHHHHHhhcCC--CCChhhHHHHHh
Q 012505 433 AVKLGLAVAAATKEFP--ALDTSALDKFVQ 460 (462)
Q Consensus 433 a~~l~~~~~~~i~~~~--~~~~~~~~~~~~ 460 (462)
.+ .-.+.+..++..+ ++.+|||.+|+-
T Consensus 512 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (548)
T cd03085 512 SK-YGLDAQVALKPLIEIALKLSKLKEFTG 540 (548)
T ss_pred hh-cccCHHHHHHHHHHHHHHHhChHHHhC
Confidence 22 1122223333333 368899999874
No 19
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
Probab=100.00 E-value=1.1e-73 Score=596.87 Aligned_cols=388 Identities=24% Similarity=0.258 Sum_probs=315.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeC-CCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g-~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~i 79 (462)
||++++++||+++|++|+++| .+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.|
T Consensus 60 ~~~~a~~~gL~s~Gi~V~~~g~~~ptP~~~~~i~------~~~~~gGI~iTaSHnp~~~nGiK~~~~~G~~~~~~~~~~I 133 (487)
T cd05799 60 EFAELTAAVLAANGIKVYLFDDLRPTPLLSFAVR------HLGADAGIMITASHNPKEYNGYKVYWEDGAQIIPPHDAEI 133 (487)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCcHHHHHHH------HhCCCeeEEEEeeCCCcccCCEEEecCCCCcCCCHHHHHH
Confidence 689999999999999999999 999999999997 5688999999999999999999999999999888877777
Q ss_pred HHHHHHhhhhhhcccccccccCCcceEEE--ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012505 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRV--DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (462)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~ 157 (462)
++.+...+.+.+..+ ......+.+..+ +..+.|++.+.+.++... .++.+++|||+||+||+++.+++.+|++
T Consensus 134 e~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~Y~~~l~~~i~~~~---~~~~~~~kVvvD~~~G~~~~~~~~il~~ 208 (487)
T cd05799 134 AEEIEAVLEPLDIKF--EEALDSGLIKYIGEEIDDAYLEAVKKLLVNPE---LNEGKDLKIVYTPLHGVGGKFVPRALKE 208 (487)
T ss_pred HHHHHhcccccccch--hhhccCCceEEcchHHHHHHHHHHHhhhcccc---cccCCCCcEEEeCCCCccHHHHHHHHHH
Confidence 775432111111000 001123555543 568899999988886321 1245789999999999999999999999
Q ss_pred cCCc---cccccccccCCCCCC-CCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcC----CCccccchhHHH
Q 012505 158 LGAK---TSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDS----TGHELNRNRLIA 229 (462)
Q Consensus 158 lg~~---v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~----~G~~l~~d~~~~ 229 (462)
|||+ ++ .+++.|||.||+ +.|+|+.+++|+.+.+.|++.++|+|+++||||||++++|+ +|+++++|++++
T Consensus 209 LG~~~v~~~-~~~~~~d~~F~~~~~p~p~~~~~l~~l~~~v~~~~ad~Gia~D~DgDR~~vvd~~~~~~g~~~~~d~l~a 287 (487)
T cd05799 209 AGFTNVIVV-EEQAEPDPDFPTVKFPNPEEPGALDLAIELAKKVGADLILATDPDADRLGVAVKDKDGEWRLLTGNEIGA 287 (487)
T ss_pred cCCCCcEEe-eeccCCCcCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCCeEEEEEEcCCCCEEEECHHHHHH
Confidence 9999 35 578999999998 68999999999999999999999999999999999999994 489999999999
Q ss_pred HHHHHHHHhC-------CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEe
Q 012505 230 LMSAIVLEEH-------PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGAL 302 (462)
Q Consensus 230 Ll~~~~l~~~-------~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~ 302 (462)
|+++++++.+ ++..||. +++|+.+++.+++++|++++||||||+|++++|.+....+.+++||||+|||++|
T Consensus 288 L~a~~ll~~~~~~~~~~~~~~vV~-~v~sS~~i~~ia~~~g~~v~~t~~G~~~i~~~m~~~~~~~~~~~~ggE~sgg~~~ 366 (487)
T cd05799 288 LLADYLLEQRKEKGKLPKNPVIVK-TIVSSELLRKIAKKYGVKVEETLTGFKWIGNKIEELESGGKKFLFGFEESIGYLV 366 (487)
T ss_pred HHHHHHHHhHhhccCCCCCcEEEE-eehhHHHHHHHHHHcCCeEEECCCCchHHHHHHHHHhccCceEEEEEeccceeee
Confidence 9999998875 3435764 5556667888999999999999999999999999865444557899999999999
Q ss_pred cCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCccc-ceeeeeecccC---ccccCCcccchh-HHHH
Q 012505 303 KENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFA-VELRLKIDQNH---SDLKGGSFRDYG-EAVL 377 (462)
Q Consensus 303 ~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~-~~~~~~v~~~~---~~~~~~~~~~~~-~~v~ 377 (462)
+++.+.+||+++++++|++|+.... ++ ++|+++++++|.+|.. ...+.++. | +| ..+ +++|
T Consensus 367 ~~~~~~~Dgi~a~~~lle~la~~~~-~~----~~Ls~l~~~l~~~y~~~~~~~~~i~--~~~~~~-------~~~~~~v~ 432 (487)
T cd05799 367 GPFVRDKDGISAAALLAEMAAYLKA-QG----KTLLDRLDELYEKYGYYKEKTISIT--FEGKEG-------PEKIKAIM 432 (487)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHH-cC----CCHHHHHHHHHHHhCceEEeeeeEE--EeCCCC-------HHHHHHHH
Confidence 9999999999999999998886322 22 4699999999985422 22222344 6 44 223 6777
Q ss_pred HHHHhhhcCCCCCCCCCccccceEEEEecC-eEEEEeecCCCceeEEEEeeCC
Q 012505 378 KHLENRVDSDPKLQKAPVNYEGQVRVSGSG-GWFLLRLSLHDPVLPLNIEAPS 429 (462)
Q Consensus 378 ~~l~~~~~~~~~~~~~~~~~dG~iki~~~~-~wvliRpSgTEP~irvy~Ea~~ 429 (462)
++|.+. . || +|+.++| +|+|||||||||+||||+|+.|
T Consensus 433 ~~l~~~----------~---DG-vki~~~dg~WvliRpS~teP~~riy~Ea~~ 471 (487)
T cd05799 433 DRLRNN----------P---NV-LTFYLEDGSRVTVRPSGTEPKIKFYIEVVG 471 (487)
T ss_pred HHHhcc----------C---CE-EEEEEcCCEEEEEEcCCCCceEEEEEEeec
Confidence 777531 1 89 9999765 7999999999999999999988
No 20
>TIGR01455 glmM phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
Probab=100.00 E-value=2e-73 Score=587.99 Aligned_cols=386 Identities=27% Similarity=0.344 Sum_probs=310.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 53 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~iTaSHnP~~~nGiK~~~~~G~~i~~~~~~~I~ 126 (443)
T TIGR01455 53 MLENALAAGLNSAGVDVLLLGPLPTPAVAYLTR------TLRADAGVMISASHNPYEDNGIKFFGPGGFKLDDATEAAIE 126 (443)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCcHHHHHHHH------hcCCCeEEEEecCCCCcccCcEEEecCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999999888777776
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.......+.+.. ....+.+... +..+.|++++.+.++. .++.+++|||+||+||+++.+++.+|++||
T Consensus 127 ~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~i~~-----~~~~~~lkVvvD~~~G~~~~~~~~ll~~lg 196 (443)
T TIGR01455 127 ALLDEADPLPRPE-----SEGLGRVKRYPDAVGRYIEFLKSTLPR-----GLTLSGLKVVLDCANGAAYKVAPHVFRELG 196 (443)
T ss_pred HHHhcCccccCCC-----ccCceEEEEcccHHHHHHHHHHHHhhc-----ccccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 6442110011110 0122445443 5788899999888752 134568999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.+||.||...|.| ++++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 197 ~~v~-~in~~~d~~~~~~~~~~---~~l~~l~~~v~~~~adlGia~DgD~DR~~~vd~~G~~l~~d~~~al~a~~ll~~~ 272 (443)
T TIGR01455 197 AEVI-AIGVEPDGLNINDGCGS---THLDALQKAVREHGADLGIAFDGDADRVLAVDANGRIVDGDQILYIIARALKESG 272 (443)
T ss_pred CEEE-EEccCCCCCCCCCCCCC---CCHHHHHHHHhhcCCCEEEEEcCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhc
Confidence 9998 69999999998655544 3578899999999999999999999999999999999999999999999999863
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
++..||.+..|| .+++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++.+.+||++++++
T Consensus 273 ~~~~~~vv~~v~ss-~~l~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 346 (443)
T TIGR01455 273 ELAGNTVVATVMSN-LGLERALEKLGLTLIRTAVGDRYVLEEMRESG-----YNLGGEQSGHIILLDYSTTGDGIVSALQ 346 (443)
T ss_pred CCCCCcEEEEccCC-HHHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CEEEEcCcceEEecCCCcCCcHHHHHHH
Confidence 344687666555 46677888899999999999999999998755 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCC-cccchhHHHHHHHHhhhcCCCCCCCCCcc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGG-SFRDYGEAVLKHLENRVDSDPKLQKAPVN 396 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 396 (462)
+|++|+... ++|+++++++|.++. .... |+|...+ ... ...-|+...+..
T Consensus 347 ile~la~~~--------~~l~~l~~~~~~~~~-~~~~------~~~~~~~~~~~--~~~~~~~~~~~~------------ 397 (443)
T TIGR01455 347 VLTIMKKSG--------STLSELAAEFVPYPQ-TLVN------VRVADRKLAAA--EAPAVKAAIEDA------------ 397 (443)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccCe-eeee------EEecccccccc--cCHHHHHHHHHH------------
Confidence 999988653 459999999997652 2222 4441100 000 001133322211
Q ss_pred ccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012505 397 YEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 445 (462)
Q Consensus 397 ~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~ 445 (462)
+ .++ .++||+|||||||||+||||+||+|++.+++|++.+.++|+
T Consensus 398 -~--~~~-~~~gW~LiRpS~teP~irv~~Ea~~~e~~~~l~~~~~~~v~ 442 (443)
T TIGR01455 398 -E--AEL-GGTGRILLRPSGTEPLIRVMVEAADEELVQQLADTLADVVS 442 (443)
T ss_pred -H--HHh-CCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 0 111 24789999999999999999999999999999999999885
No 21
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.4e-73 Score=590.40 Aligned_cols=385 Identities=25% Similarity=0.347 Sum_probs=313.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 55 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 128 (448)
T PRK14316 55 MLESALIAGLLSVGAEVMRLGVIPTPGVAYLTR------ALGADAGVMISASHNPVEDNGIKFFGSDGFKLSDEQEDEIE 128 (448)
T ss_pred HHHHHHHHHHHHCCCEEEEecccchHHHHHHHH------HhcCcEEEEEEecCCChhhCcEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999998888777777
Q ss_pred HHHHHhhhhhhccccccccc---CCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHh
Q 012505 81 RAADIYKQFMVEGLTNLEKQ---TSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLE 156 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~---~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~ 156 (462)
+..... .+++ .+. ..+.+... +..+.|++.+.+.++. ..+++|||+||+||+++.+++++|+
T Consensus 129 ~~~~~~----~~~~---~~~~~~~~g~~~~~~~~~~~Y~~~l~~~i~~-------~~~~lkvvvD~~nG~~~~~~~~ll~ 194 (448)
T PRK14316 129 ALLDAE----EDTL---PRPSGEGLGTVSDYPEGLRKYLQFLKSTIDE-------DLSGLKVALDCANGATSSLAPRLFA 194 (448)
T ss_pred HHHhcc----cccc---ccCccccceeEEEeCcHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchhhHHHHHHHH
Confidence 644211 0111 111 12334433 5678899988887742 2368999999999999999999999
Q ss_pred hcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHH
Q 012505 157 PLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236 (462)
Q Consensus 157 ~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l 236 (462)
+|||+++ .+|+.|||.||++.|.|+.+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|++++++
T Consensus 195 ~lg~~v~-~in~~~dg~~~~~~~~~~~~---~~l~~~v~~~~adlGia~DgDaDR~~~vd~~G~~i~~d~~~~l~a~~ll 270 (448)
T PRK14316 195 DLGADVT-VIGTSPDGLNINDGVGSTHP---EALQELVVEKGADLGLAFDGDADRLIAVDENGNIVDGDKIMFICGKYLK 270 (448)
T ss_pred HcCCeEE-EEccCCCCCCCCCCCCCCCH---HHHHHHHhhcCCCEEEEEcCCCceEEEECCCCCEeCHHHHHHHHHHHHH
Confidence 9999998 68999999999877777654 5688999999999999999999999999999999999999999999999
Q ss_pred HhC--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHH
Q 012505 237 EEH--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYL 314 (462)
Q Consensus 237 ~~~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~a 314 (462)
+.+ ++..||. +++|+.+.+.+++++|+++++||||++|++++|.+.+ ++||||+|||++|+++.+.+||+++
T Consensus 271 ~~~~~~~~~vv~-~v~ss~~~~~~~~~~g~~v~~~~vG~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a 344 (448)
T PRK14316 271 EKGRLKKNTIVT-TVMSNLGFYKALEEEGINSVKTKVGDRYVVEEMRKGG-----YNLGGEQSGHIIFLDYNTTGDGLLT 344 (448)
T ss_pred HhCCCCCCeEEE-eccCchHHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CeEEEcCcccEEecccCCCCcHHHH
Confidence 875 4446775 5555567777778899999999999999999998765 4699999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHH--HHHhhhcCCCCCCC
Q 012505 315 MVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLK--HLENRVDSDPKLQK 392 (462)
Q Consensus 315 a~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~--~l~~~~~~~~~~~~ 392 (462)
++++|++|+..+ ++|+++++++|.+.... ....+. . ++++|+ ++.+
T Consensus 345 ~l~ile~l~~~~--------~~ls~l~~~~~~~p~~~-~~~~v~----~---------k~~~~~~~~~~~---------- 392 (448)
T PRK14316 345 ALQLAKVMKETG--------KKLSELAAEMKKYPQKL-VNVRVT----D---------KKKAMENPEIKE---------- 392 (448)
T ss_pred HHHHHHHHHHhC--------CCHHHHHhhhhhcCcce-EEeEeC----C---------ccccccCHHHHH----------
Confidence 999999987643 45999999986532111 122221 1 122222 1111
Q ss_pred CCccccceEEEE-ecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012505 393 APVNYEGQVRVS-GSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPALD 451 (462)
Q Consensus 393 ~~~~~dG~iki~-~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~~~ 451 (462)
.+++ +++. +++||+|||||||||+||||+||.|++.++++++.+.++|++.+.+|
T Consensus 393 ---~i~~-i~~~~~~~gw~liRpS~TEP~irvy~Ea~~~e~~~~l~~~~~~~i~~~~~~~ 448 (448)
T PRK14316 393 ---IIEK-VEEEMAGNGRVLVRPSGTEPLVRVMAEAPTQEEVDKYVDRIADVVEAEMGLD 448 (448)
T ss_pred ---HHHH-HHHHhCCCceEEEecCCCCcEEEEEEEeCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 1344 4443 35789999999999999999999999999999999999999887664
No 22
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=3.1e-73 Score=586.14 Aligned_cols=384 Identities=23% Similarity=0.260 Sum_probs=311.3
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.++.++.++.++
T Consensus 56 ~l~~a~~~gL~s~G~~V~d~g~~pTP~~~~av~------~~~~~gGI~ITaSHNp~~~nGiK~~~~~G~~i~~~~~~~Ie 129 (443)
T PRK14320 56 FLKFALVSGLNAAGIDVLDLGVVPTPVVAFMTV------KHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALEEEVE 129 (443)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHH------HcCCceEEEEEeCCCchHHCeEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+... +.+.+.. ....+.+... +..+.|++++.+.++. . ...++|||+||+||+++.+++++|++||
T Consensus 130 ~~~~--~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~-~-----~~~~~kVvvD~~nG~~~~~~~~ll~~lg 196 (443)
T PRK14320 130 DMID--GDFIYQP-----QFKFGSYKILANAIDEYIESIHSRFAK-F-----VNYKGKVVVDCAHGAASHNFEALLDKFG 196 (443)
T ss_pred HHHh--ccccccc-----cccCcceEeccchHHHHHHHHHHHHHh-h-----ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 6532 1111100 0123555544 5788999999887751 1 1135699999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.|++..|. +++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 197 ~~v~-~i~~~~dg~~~~~~~~---~~~l~~l~~~v~~~~adlGia~DgDaDR~~~vd~~G~~l~gd~~~al~a~~l~~~~ 272 (443)
T PRK14320 197 INYV-SIASNPDGLNINVGCG---ATCVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICG 272 (443)
T ss_pred CcEE-EECCcCCCCCCCCCCc---hHhHHHHHHHHHHcCCCEEEEECCCCceEEEECCCCcccCHHHHHHHHHHHHHHhC
Confidence 9998 6899999999854443 35689999999999999999999999999999999999999999999999987754
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
+..++|.++.||+ .++.+++++|+++++||||+++++++|.+.+ .+||||+|||++|+++.+.+|||++++++|
T Consensus 273 ~~~~vV~~~~~s~-~~~~~~~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~~~ll 346 (443)
T PRK14320 273 GTNGIVGTQMTNM-SYENHYRANKIPFIRSKVGDRYVLEDLVKYG-----YKIGGESSGHVINLNFGTTGDGLFTAIQLL 346 (443)
T ss_pred CCCCEEEecCCcH-HHHHHHHHCCCCEEEecCchHHHHHHHHhCC-----CcEeecCCccEEccCCCCcCCHHHHHHHHH
Confidence 3235888888888 5556778899999999999999999998765 469999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++|+..+ ++|++++... .++...+++ |+|-.. . +.+.++++.+ .+++
T Consensus 347 e~la~~~--------~~ls~l~~~~-~~~~~~~~~------~~~~~~----~-~~~~~~~~~~-------------~~~~ 393 (443)
T PRK14320 347 AIFSQAD--------KPVSEFKLQG-ELMQQTLIN------VPLTKK----V-AREDLQKVAS-------------DVND 393 (443)
T ss_pred HHHHHcC--------CCHHHHhccc-ccCceEEEE------EEecCC----C-CcchhHHHHH-------------HHHH
Confidence 9998753 4699999542 223333333 444110 0 0023333322 1344
Q ss_pred eEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 400 QVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 400 ~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
+++.. ++||+|||||||||+||||+||.|++.++++++.+.++|++-
T Consensus 394 -~~~~~~~~gW~LiRpS~teP~~rv~~Ea~s~e~a~~l~~~~~~~i~~~ 441 (443)
T PRK14320 394 -VEKRLGNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_pred -HHhhhCCCceEEEecCCCCceEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 55443 689999999999999999999999999999999999999864
No 23
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=3.1e-73 Score=585.42 Aligned_cols=376 Identities=28% Similarity=0.367 Sum_probs=305.8
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 52 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~i~ 125 (434)
T cd05802 52 MLESALAAGLTSAGVDVLLLGVIPTPAVAYLTR------KLRADAGVVISASHNPFEDNGIKFFSSDGYKLPDEVEEEIE 125 (434)
T ss_pred HHHHHHHHHHHHCCCcEEEEcccchHHHHHHHH------HhCCCeEEEEEecCCchhhCCEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999998888777776
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
...... .+.+.. ....+.+... +..+.|++++.+.++.. ..+++|||+||+||+++.+++++|++||
T Consensus 126 ~~~~~~-~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~~------~~~~lkVvvD~~nG~~~~~~~~ll~~lg 193 (434)
T cd05802 126 ALIDKE-LELPPT-----GEKIGRVYRIDDARGRYIEFLKSTFPKD------LLSGLKIVLDCANGAAYKVAPEVFRELG 193 (434)
T ss_pred HHHhCc-cccccc-----cccCeeEEEccchHHHHHHHHHHhcCcc------ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 644211 110000 0123445444 57788999998887531 1468999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|.|+ +++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 194 ~~v~-~in~~~dg~~~~~~~~~~---~~~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~~~~l~a~~l~~~~ 269 (434)
T cd05802 194 AEVI-VINNAPDGLNINVNCGST---HPESLQKAVLENGADLGIAFDGDADRVIAVDEKGNIVDGDQILAICARDLKERG 269 (434)
T ss_pred CeEE-EecCCCCCCCCCCCCCcc---CHHHHHHHHHhcCCCEEEEEcCCCceEEEECCCCCEeCHHHHHHHHHHHHHHhC
Confidence 9998 699999999987766554 467889999999999999999999999999999999999999999999999875
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
++..||.+..||. +++.+++++|+++++||||+++++++|.+.+ .+||||+|||++|+++++.+||++++++
T Consensus 270 ~~~~~~vv~~v~ss~-~~~~~~~~~g~~v~~~~~G~~~i~~~~~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ 343 (434)
T cd05802 270 RLKGNTVVGTVMSNL-GLEKALKELGIKLVRTKVGDRYVLEEMLKHG-----ANLGGEQSGHIIFLDHSTTGDGLLTALQ 343 (434)
T ss_pred CCCCCeEEEecCCcH-HHHHHHHHcCCeEEEEcChHHHHHHHHHhcC-----CEEEEecCCCEEecCcCCCCcHHHHHHH
Confidence 4456776555554 6666778899999999999999999998765 4699999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHH--HHHHhhhcCCCCCCCCCc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDSDPKLQKAPV 395 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~~~~~~~~~~ 395 (462)
+|++|+..+ ++|++++++||.++.. +.+++ ++. +++++ +.+.+
T Consensus 344 lle~la~~~--------~~ls~l~~~l~~~~~~---~~~v~--~~~---------~~~~~~~~~~~~------------- 388 (434)
T cd05802 344 LLAIMKRSG--------KSLSELASDMKLYPQV---LVNVR--VKD---------KKALLENPRVQA------------- 388 (434)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccCee---eEEEE--eCC---------ccccccCHHHHH-------------
Confidence 999997653 4699999999876432 22232 221 11111 11111
Q ss_pred cccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHH
Q 012505 396 NYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAV 440 (462)
Q Consensus 396 ~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~ 440 (462)
.+|| +++.. ++||+|||||||||+||||+||.|++.+++|++.+
T Consensus 389 ~~~~-~~~~~~~~gW~liRpS~tep~irv~~Ea~s~~~~~~l~~~~ 433 (434)
T cd05802 389 AIAE-AEKELGGEGRVLVRPSGTEPLIRVMVEGEDEELVEKLAEEL 433 (434)
T ss_pred HHHH-HHHhhCCCeEEEEecCCCCcEEEEEEeeCCHHHHHHHHHhh
Confidence 1344 55544 57999999999999999999999999999998765
No 24
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.9e-73 Score=587.61 Aligned_cols=380 Identities=23% Similarity=0.282 Sum_probs=305.2
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.+|
T Consensus 57 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 130 (440)
T PRK14323 57 MLEAALAAGLTSRGVRVEHLGVLPTPGVSYLTR------HLGATAGVVISASHNPYQDNGIKFFGADGEKLPDAAELEIE 130 (440)
T ss_pred HHHHHHHHHHHHCCCEEEEecccChHHHHHHHH------HhCCCEEEEEecCCCCCccCCEEEeCCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56899999999999999999999999999998888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.....+.+.+. .....+.+... +..+.|++.+.+.++ ..+++|||+||+||+++.+++++|++||
T Consensus 131 ~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~Y~~~l~~~~~--------~~~~~kVvvD~~~G~~~~~~~~ll~~lG 197 (440)
T PRK14323 131 ALLDEVPELAEV-----TGAGIGSVSDFTEAERLYLDFLLSHAP--------DLSGLKVALDCANGAAYRLAPKVFQAAG 197 (440)
T ss_pred HHHhcccccCcc-----cccCceeEEEhhhHHHHHHHHHHHhcc--------cccCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654211111100 01122445444 467778888876543 2368999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|.|+ +++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|++.+..
T Consensus 198 ~~v~-~l~~~~dg~~~~~~~~~~---~l~~l~~~v~~~~adlGia~DgD~DR~~~vD~~G~~i~~d~~~~l~a~~~~--- 270 (440)
T PRK14323 198 ADVF-ALFNTPDGRNINRGCGST---HPEALQRFVVEGGLDLGVAFDGDADRALFVDRRGRLFHGDHMLYLNALARG--- 270 (440)
T ss_pred CcEE-EEeccCCCCcCCCCCCCC---CHHHHHHHHhccCCCEEEEeCCCcceeEEECCCCcEeCHHHHHHHHHHHhc---
Confidence 9998 699999999987666554 467889999999999999999999999999999999999999999997641
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
+ +.||.+..||. +++.+++++|+++++||||+++++++|.+.+ ++||||+|||++|+++.+.+|||++++++|
T Consensus 271 ~-~~vV~~v~ss~-~~~~~~~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~~l 343 (440)
T PRK14323 271 E-KAVVGTVMSNM-ALEVKLREAGIAFHRTAVGDRYVHEKLHAKG-----LTLGGEQSGHVLFLDHAPTGDGVLTALLTL 343 (440)
T ss_pred C-CcEEEEeCCCh-HHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CeEEEcCcccEEeCCCCCCCcHHHHHHHHH
Confidence 3 35776665555 6666778899999999999999999998765 479999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++|+..+ ++|+++++++|.++... .++. |+. ++++|+.. +.... +++
T Consensus 344 e~la~~~--------~~ls~l~~~~~~~~~~~---~~v~--~~~---------k~~~~~~~-~~~~~----------i~~ 390 (440)
T PRK14323 344 AAMKALG--------TDLDAWYDALPMYPQTL---LNVR--VSD---------KAKVAADP-RVQEA----------VRE 390 (440)
T ss_pred HHHHHhC--------CCHHHHHHhhhhcCcee---EEEE--eCC---------ccchhcCH-HHHHH----------HHH
Confidence 9988753 45999999999764332 2333 532 22344321 10000 111
Q ss_pred eEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 400 QVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 400 ~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
+++.. ++||+|||||||||+||||+||.|++.++++++.+.++|+++
T Consensus 391 -~~~~~~~~gW~LvRpS~TEP~irv~~Ea~s~~~~~~l~~~~~~~v~~~ 438 (440)
T PRK14323 391 -AEARLGGRGRVNLRPSGTEPLVRVMVEGPDEAEIEEVARELAGVVERL 438 (440)
T ss_pred -HHhhcCCCeEEEEecCCCccEeEEEEeeCCHHHHHHHHHHHHHHHHHh
Confidence 11222 578999999999999999999999999999999999999865
No 25
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=6.5e-73 Score=584.85 Aligned_cols=388 Identities=26% Similarity=0.328 Sum_probs=313.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 57 ~l~~a~~~gL~s~Gv~V~~~g~~ptP~~~~a~~------~~~~~gGI~iTaShnp~~~ngiK~~~~~G~~~~~~~~~~Ie 130 (450)
T PRK14314 57 MFENALIAGLCSMGVDVLLVGPLPTPGIAFITR------SMRADAGVVISASHNPYQDNGIKFFSSDGFKLPDEVELRIE 130 (450)
T ss_pred HHHHHHHHHHHHCCCeEEEecccCCHHHHHHHH------hcCCCEEEEEEeCCCCcccccEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999999988888777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.+... .+.+.. ......+.+... +..+.|++++.+.++. .++.+++|||+||+||+++.+++.+|++||
T Consensus 131 ~~~~~~-~~~~~~---~~~~~~g~~~~~~~~~~~Y~~~l~~~id~-----~i~~~~~kVvvD~~~Ga~~~~~~~il~~lg 201 (450)
T PRK14314 131 AMVLSK-DFDWLL---PDAHAVGKAKRIDDAPGRYIVFLKATFPK-----GLTLKGLKIVLDCANGAAYKVAPAVFEELG 201 (450)
T ss_pred HHHhcC-Cccccc---cchhcCceEEEeCchHHHHHHHHHHhhcc-----ccCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654221 111000 000122444444 6788899999888762 123568999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|++|||.||++.|.|+. ++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 202 ~~v~-~~~~~~dg~~~~~~~~~~~---~~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~~~al~~~~ll~~~ 277 (450)
T PRK14314 202 AEVI-CIGVEPNGLNINAGCGSLH---PEVIAKAVIEHGADLGIALDGDADRLIVVDEKGHIVDGDQIMAICATDLKKRG 277 (450)
T ss_pred CeEE-EeccCCCCCCCCCCCCCCC---HHHHHHHHHhcCCCeEEEEcCCCceEEEECCCCcCcCHHHHHHHHHHHHHHhc
Confidence 9998 6899999999987777655 45788999999999999999999999999999999999999999999999873
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
++..||.+. +|+.+++.+++++|+++++||||+++++++|.+.+ .+||||+|||++|+++++.+||++++++
T Consensus 278 ~~~~~~vv~~v-~ss~~~~~ia~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~ 351 (450)
T PRK14314 278 ALPKNTLVATV-MSNMGLEVAMKELGGQVLRTPVGDRYVVEEMRRGG-----ANLGGEQSGHLIFLDHNTTGDGILSALQ 351 (450)
T ss_pred CCCCCEEEEec-cCChHHHHHHHHcCCEEEEeCChHHHHHHHHHhcC-----CEEEEeCcccEEEeCCCCCCcHHHHHHH
Confidence 445677555 45557777889999999999999999999998765 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (462)
+|++|+..+ ++|+++++++|.+.... .+ |+|-....+ ..+.++.+ .+
T Consensus 352 ~le~la~~~--------~~Ls~l~~~~~~~p~~~-~~------~~~~~k~~~-----~~~~~~~~-------------~i 398 (450)
T PRK14314 352 VLRIMIESG--------KPLSELAGLLEPFPQAL-IN------VRVKEKIPL-----ETLPEVAK-------------AI 398 (450)
T ss_pred HHHHHHHhC--------CCHHHHHhhhhhcCccc-eE------eEeCCcCcc-----ccHHHHHH-------------HH
Confidence 999998753 45999999766432111 12 555110111 11222221 13
Q ss_pred cceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 398 EGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 398 dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
|| +++.. ++||+|||||+|||+||||+||.|++.++++++.+.++|++.
T Consensus 399 ~~-v~~~~~~~gWvLiRpS~tEP~iri~~Ea~~~~~a~~l~~~~~~~v~~~ 448 (450)
T PRK14314 399 KD-VEEALGDSGRVLLRYSGTENLCRVMVEGEDKHQVDSLAKEIADVVEKE 448 (450)
T ss_pred HH-HHhhhCCCcEEEEecCCCCcEEEEEEeeCCHHHHHHHHHHHHHHHHHh
Confidence 44 55443 579999999999999999999999999999999999999874
No 26
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=4.2e-73 Score=586.00 Aligned_cols=383 Identities=26% Similarity=0.333 Sum_probs=309.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 59 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 132 (448)
T PRK14318 59 FLEAAVSAGLASAGVDVLRVGVLPTPAVAYLTA------ALDADFGVMISASHNPMPDNGIKFFAAGGHKLPDDVEDRIE 132 (448)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHH------hcCCCEEEEEEcCCCCcccCCEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57889999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.+... .+.+.. ....+.+... +..+.|++.+.+.++ .+.+++|||+||+||+++.+++++|++||
T Consensus 133 ~~~~~~-~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~i~-------~~~~~~kVvvD~~nG~~~~~~~~ll~~lG 199 (448)
T PRK14318 133 AVLGQL-PWLRPT-----GAGVGRVIDAPDATDRYLRHLLGALP-------TRLDGLKVVVDCAHGAASGVAPEAYRAAG 199 (448)
T ss_pred HHHhcc-Cccccc-----cccCceEEECCcHHHHHHHHHHHHhc-------cccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654211 111100 0122444444 577889999988774 23468999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||+..|.| ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|++.++++..
T Consensus 200 ~~v~-~in~~~dg~~~~~~~~~---~~l~~l~~~v~~~~adlGia~DgD~DR~~~vd~~G~~l~~d~~~~l~a~~l~~~~ 275 (448)
T PRK14318 200 ADVI-AINADPDGLNINDGCGS---THLEQLQAAVVAHGADLGLAHDGDADRCLAVDANGNVVDGDQIMAILALAMKEAG 275 (448)
T ss_pred CEEE-EeccCCCCCCCCCCCCC---CCHHHHHHHHHhcCCCEEEEecCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhc
Confidence 9998 69999999998655544 4578899999999999999999999999999999999999999999998887764
Q ss_pred C--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 P--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 ~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
+ ++.||. +++|+.+.+.+++++|+++++||||+++++++|.+.+ ++||||+|||++|+++++.+||++++++
T Consensus 276 ~~~~~~vV~-~v~ss~~~~~~~~~~g~~v~~t~vG~~~i~~~~~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 349 (448)
T PRK14318 276 ELASDTLVA-TVMSNLGLKLAMREAGITVVTTAVGDRYVLEEMRAGG-----YSLGGEQSGHIVMPDHATTGDGILTGLR 349 (448)
T ss_pred CCCCCcEEE-EecCchHHHHHHHHcCCcEEEeCChHHHHHHHHHhcC-----cEEEEcCcCcEEecCCCCCCCHHHHHHH
Confidence 2 345775 4555567777888899999999999999999998755 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHH--HHhhhcCCCCCCCCCc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKH--LENRVDSDPKLQKAPV 395 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~--l~~~~~~~~~~~~~~~ 395 (462)
+|++|+..+ ++|+++++++|.+.... .. |+| ..++++|+. +.+.
T Consensus 350 ile~la~~~--------~~ls~l~~~~~~~p~~~-----~~--~~~-------~~~~~~~~~~~~~~~------------ 395 (448)
T PRK14318 350 LMARMAQTG--------KSLAELASAMTVLPQVL-----IN--VPV-------VDKTTAATAPSVRAA------------ 395 (448)
T ss_pred HHHHHHHhC--------CCHHHHHhhhhhcCcce-----ee--eec-------CCccchhccHHHHHH------------
Confidence 999998653 45999998776542111 12 666 123344431 2110
Q ss_pred cccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 396 NYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 396 ~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
++. +.+.. ++||+|||||+|||+||||+||+|++.++++++.+.++|++-+
T Consensus 396 -i~~-~~~~~~~~gw~lvRpS~teP~irv~~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (448)
T PRK14318 396 -VAR-AEAELGDTGRVLLRPSGTEPLVRVMVEAADEETARRVAGRLADVVAEAL 447 (448)
T ss_pred -HHH-HHhhhcCCeEEEEeeCCCCcEEEEEEeECCHHHHHHHHHHHHHHHHHhc
Confidence 000 11122 5799999999999999999999999999999999999997643
No 27
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Probab=100.00 E-value=5.9e-73 Score=599.82 Aligned_cols=415 Identities=20% Similarity=0.176 Sum_probs=308.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeC-CCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g-~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~i 79 (462)
||+++++++|+++|++|+++| .+|||+++|+++ +++|+|||||||||||++||||||++++|.++.++..+.+
T Consensus 104 ~fa~~~a~~L~a~Gi~V~~~g~~~pTP~lsfav~------~~~a~gGImITASHNP~eyNGiK~~~~~G~~i~~~~~~~i 177 (584)
T PTZ00150 104 RFAEITASVFLSKGFKVYLFGQTVPTPFVPYAVR------KLKCLAGVMVTASHNPKEDNGYKVYWSNGAQIIPPHDKNI 177 (584)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCcHHHHHHHH------HhCCCeEEEEeccCCCCCCCCEEEeCCCCcccCCcccHHH
Confidence 589999999999999999996 999999999997 6789999999999999999999999999998754433333
Q ss_pred HHHH-HHhhhhhhcccccccccCCcceEE--EccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHh
Q 012505 80 ERAA-DIYKQFMVEGLTNLEKQTSTSIKR--VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLE 156 (462)
Q Consensus 80 e~~~-~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~ 156 (462)
++.. +....+ .++ +++...+.+.. .++.+.|++++.+.++... ++.+++|||+||+||+++.+++++|+
T Consensus 178 ~~~Ie~~~~~~-~~~---~~~~~~~~~~~~~~d~~~~Yi~~l~~~i~~~~----i~~~~lkIv~d~~~G~g~~~~~~iL~ 249 (584)
T PTZ00150 178 SAKILSNLEPW-SSS---WEYLTETLVEDPLAEVSDAYFATLKSEYNPAC----CDRSKVKIVYTAMHGVGTRFVQKALH 249 (584)
T ss_pred HHHHHHhcccc-ccc---hhhhccccccchhhhhHHHHHHHHHhhcChhh----hccCCCeEEEeCCCCccHHHHHHHHH
Confidence 3211 110001 111 01111112221 2557889999887764321 23468999999999999999999999
Q ss_pred hcCCc---cccccccccCCCCCCC-CCCCCc-HHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCC---ccccchhHH
Q 012505 157 PLGAK---TSGSQFLEPDGMFPNH-IPNPED-KTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTG---HELNRNRLI 228 (462)
Q Consensus 157 ~lg~~---v~~~~~~~~d~~f~~~-~p~P~~-~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G---~~l~~d~~~ 228 (462)
++||+ ++ .+|+.|||.||+. .|||++ +++|+.+.+.+++.++|+|+++||||||++++|+.| +++++|+++
T Consensus 250 ~lG~~~~~~v-~~~~~pDg~Fp~~~~PnPe~~~~~l~~~~~~v~~~~adlgia~DpDaDR~~vvd~~g~~~~~l~gd~l~ 328 (584)
T PTZ00150 250 TVGLPNLLSV-AQQAEPDPEFPTVTFPNPEEGKGALKLSMETAEAHGSTVVLANDPDADRLAVAEKLNNGWKIFTGNELG 328 (584)
T ss_pred hcCCCCceEe-ccccccCcCCCCCCCcChhhhHHHHHHHHHHHHHhCCCEEEEeCCCCCceEEEEEcCCceEEcChhHHH
Confidence 99998 45 5789999999984 899998 899999999999999999999999999999998654 899999999
Q ss_pred HHHHHHHHHhCC-------CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCC-cceeEeeeecce
Q 012505 229 ALMSAIVLEEHP-------GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGE-ESHLAIETSGHG 300 (462)
Q Consensus 229 ~Ll~~~~l~~~~-------~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~-~~~~g~E~sG~~ 300 (462)
+|+++++++..+ +..||.+.+|| .+++.+|+++|+++++|+||||||+++|.+.+..+. .++||||||||+
T Consensus 329 aLla~~ll~~~~~~g~~~~~~~Vv~tv~sS-~~l~~ia~~~g~~v~~t~tGfk~I~~~m~~~~~~~~~~~~~ggEeSgG~ 407 (584)
T PTZ00150 329 ALLAWWAMKRYRRQGIDKSKCFFICTVVSS-RMLKKMAEKEGFQYDETLTGFKWIGNKAIELNAENGLTTLFAYEEAIGF 407 (584)
T ss_pred HHHHHHHHHhhhhcCCCCCCcEEEEehhhh-HHHHHHHHHcCCEEEECCCChHHHHHHHHHHHhcCCceEEEEEeccCcc
Confidence 999999988642 22477655555 577889999999999999999999999987543332 478999999999
Q ss_pred EecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccce-eeee-ecccCccccCCcccchhHHHHH
Q 012505 301 ALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLK-IDQNHSDLKGGSFRDYGEAVLK 378 (462)
Q Consensus 301 ~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~-v~~~~~~~~~~~~~~~~~~v~~ 378 (462)
+|+++.+.+||++++++++++++.. ..++ ++|++++++||+.|.... -... +. +.. +...++|.
T Consensus 408 ~~~~~~~~kDgi~aal~ile~~~~l-~~~g----~sL~e~l~~l~~~~G~~~~~~~~~~~--~~~-------~~~~~~~~ 473 (584)
T PTZ00150 408 MLGTRVRDKDGVTAAAVVAEMALYL-YERG----KTLVEHLESLYKQYGYHFTNNSYYIC--YDP-------SRIVSIFN 473 (584)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHH-HHcC----CCHHHHHHHHHHHHCCCccceeeEec--CCH-------HHHHHHHH
Confidence 9999999999999999998885422 2223 469999999998653211 1111 22 111 23456777
Q ss_pred HHHh--hh-cCCCCCCCC-C------------------c---cccceEEEEe-cCeEEEEeecCCCceeEEEEeeCC--H
Q 012505 379 HLEN--RV-DSDPKLQKA-P------------------V---NYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPS--R 430 (462)
Q Consensus 379 ~l~~--~~-~~~~~~~~~-~------------------~---~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~--~ 430 (462)
++++ .. ....|.++. + . ..|| ||+.+ +++|+++|||||||+||+|+|+.. .
T Consensus 474 ~l~~~~~~~~~~~g~~v~~~~d~~~~~~~~~~~~~~~lp~~~~~~~-lk~~~~~g~~~~~RpSGTEPkik~Y~e~~~~~~ 552 (584)
T PTZ00150 474 DIRNNGSYPTKLGGYPVTRIRDLTTGYDTATPDGKPLLPVSASTQM-ITFYFENGAIITIRGSGTEPKLKWYAELSGTKD 552 (584)
T ss_pred HHhccCCcchhhCCeeEEEEEecccccccccCCCcccCCCcccCCe-EEEEEcCCeEEEEEcCCCCCeEEEEEEecchhH
Confidence 7765 21 112221110 0 0 2478 99996 567999999999999999999933 3
Q ss_pred HHHHHHHHHHHHHhhc
Q 012505 431 EDAVKLGLAVAAATKE 446 (462)
Q Consensus 431 ~~a~~l~~~~~~~i~~ 446 (462)
+.+.+.++.+.+.+..
T Consensus 553 ~~~~~~~~~~~~~~~~ 568 (584)
T PTZ00150 553 EAVEKELAALVDEVVE 568 (584)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333444444443333
No 28
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1e-71 Score=572.57 Aligned_cols=374 Identities=24% Similarity=0.298 Sum_probs=305.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++ +|||||||||||++||||||+ ++|.+++++.++.++
T Consensus 52 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~-~gGI~ITaSHnP~~~nGiK~~-~~G~~i~~~~~~~ie 123 (429)
T PRK14322 52 SLEAAISAGLTSMGVDVLLCGILPTPAVALLTR------ITR-SFGVVISASHNPPEYNGIKVL-KGGYKIPDEMEVEIE 123 (429)
T ss_pred HHHHHHHHHHHHCCCeEEEecCcCHHHHHHHHh------ccC-CceEEEECCCCChHhCCEEEe-cCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999986 344 899999999999999999999 999988888777776
Q ss_pred HHHHHhhhhhhccccccccc-CCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012505 81 RAADIYKQFMVEGLTNLEKQ-TSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~l 158 (462)
+.+.. +++ ++. ..+.+... +..+.|++.+.+.++. ...+++|||+||+||+++.++|++|++|
T Consensus 124 ~~~~~------~~~---~~~~~~g~~~~~~~~~~~Y~~~l~~~v~~------~~~~~~kVvvD~~nG~~~~~~~~ll~~l 188 (429)
T PRK14322 124 ERIES------GYF---PVRSVVGRTKSFREGRDMYIGAVLEMFRD------LDLTGEMVSLDLANGATTTTAKEVFEFL 188 (429)
T ss_pred HHHhc------CCC---ccccCceeEEeccchHHHHHHHHHHhhcc------cccCCCEEEEECCCChHHHHHHHHHHHc
Confidence 64421 111 121 13455555 5788899999887742 1246899999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012505 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (462)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~ 238 (462)
||+++ .+|+.|||.||+..|.|+. ++.+.+.++ ++|+|+++||||||++++|++|+++++|++++|++.++++.
T Consensus 189 g~~v~-~ln~~~dg~~~~~~~~~~~---l~~l~~~v~--~~dlGia~DgD~DR~~~vd~~G~~i~~d~~~~l~a~~l~~~ 262 (429)
T PRK14322 189 GAKVE-VFNDSQDGLLINQGCGATH---PRFLAEEMK--NGKVGFTFDGDGDRVIAVDEERNVVNGDRIIGILAVGLKEE 262 (429)
T ss_pred CCEEE-EECCcCCCCCCCCCCCcCC---HHHHHHHHH--hcCEEEEEcCCCceEEEECCCCcEEChHHHHHHHHHHHHHh
Confidence 99998 6899999999866554443 566777776 46999999999999999999999999999999999999987
Q ss_pred CC--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHH
Q 012505 239 HP--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (462)
Q Consensus 239 ~~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (462)
.+ .+.||.+..||. +++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||+++++
T Consensus 263 ~~~~~~~vV~~v~ss~-~l~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l 336 (429)
T PRK14322 263 GRLNSDTVVGTVMTNG-GLEDFLKERGIKLLRTKVGDKYVLEKMLESG-----ANLGGERSGHIIILDRSTTGDGLITAL 336 (429)
T ss_pred cCCCCCeEEEeecCch-HHHHHHHHcCCeEEEeCCccHHHHHHHhhcC-----cceeccCCceEEecCCCCCCcHHHHHH
Confidence 52 236776555555 6677888899999999999999999998765 469999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCcc
Q 012505 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVN 396 (462)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 396 (462)
++|++|+..+ ++|+++++++|.++... .++. |+|. .+.++++|+++.+.. .
T Consensus 337 ~lle~la~~~--------~~Ls~l~~~lp~~~~~~---~~v~--~~~~-----~~~~~~~~~~~~~~~-----------~ 387 (429)
T PRK14322 337 ELMRVLKRSG--------RNLSDFAKEIPDYPQIT---KNVR--RTER-----MSLENENLRKIVEES-----------T 387 (429)
T ss_pred HHHHHHHHhC--------CCHHHHHhhchhcCeee---eEee--eccc-----cccchHHHHHHHHHh-----------c
Confidence 9999998653 46999999999864332 2344 7761 012456777664321 0
Q ss_pred ccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 397 YEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 397 ~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
.+++|+|||||||||+||||+||.|++.++++++.+.++|+.
T Consensus 388 --------~~g~w~lvRpS~teP~irv~~Ea~~~~~a~~l~~~~~~~l~~ 429 (429)
T PRK14322 388 --------SRGYRVVIRPSGTEPVVRITVEGKDREEIEKIVEEISRVLES 429 (429)
T ss_pred --------CCCcEEEEccCCCCcEEEEEEEECCHHHHHHHHHHHHHHHhC
Confidence 234799999999999999999999999999999999998863
No 29
>PLN02307 phosphoglucomutase
Probab=100.00 E-value=6.8e-72 Score=585.65 Aligned_cols=432 Identities=20% Similarity=0.216 Sum_probs=321.6
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccC---CCCeEEEEcCCCCC---CCCCeeeEEcCCCCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFC---PVDGAIMITASHLP---YNRNGLKFFTNAGGLG 71 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l---~a~gGI~ITaSHnp---~~~nGiK~~~~~G~~~ 71 (462)
+|+++++++|+++|++|+++ |.+|||+++|+++ ++ +|++|||||||||| ++||||||++++|.++
T Consensus 76 ~fa~~~a~~L~a~Gi~V~~~~~~G~~PTP~vsfav~------~~~~~~a~gGImITASHNP~~~~eyNGiK~~~~~G~~~ 149 (579)
T PLN02307 76 EAIQIIIKIAAANGVRRVWVGQNGLLSTPAVSAVIR------ERDGSKANGGFILTASHNPGGPEEDFGIKYNYESGQPA 149 (579)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccCchHHHHHHH------HhcccCCCeEEEEecCCCCCCCCCCCEEEEECCCCCcC
Confidence 58999999999999999999 7999999999997 56 89999999999999 8999999999999998
Q ss_pred CHHHHHHH-HHHHHHhhhhhh-ccccc--ccc---cC-----CcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEE
Q 012505 72 KPDIKDIL-ERAADIYKQFMV-EGLTN--LEK---QT-----STSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIV 139 (462)
Q Consensus 72 ~~~~~~~i-e~~~~~~~~~~~-~~~~~--~~~---~~-----~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvv 139 (462)
.++.+..| +++... ....+ ..+.. ... .. ...+...+..+.|++.+.+.++...+......+++|||
T Consensus 150 ~~~~~~~I~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~i~~~~i~~~~~~~~lkVv 228 (579)
T PLN02307 150 PESITDKIYGNTLTI-KEYKMAEDIPDVDLSAVGVTKFGGPEDFDVEVIDPVEDYVKLMKSIFDFELIKKLLSRPDFTFC 228 (579)
T ss_pred CcHHHHHHHHHHHhh-hhhhhcccccccchhhhcccccccccccceEEecCHHHHHHHHHHhhCHHHHhhhcccCCCeEE
Confidence 87766666 332221 11111 00000 000 00 11224457889999999887643221111113589999
Q ss_pred EeCCCCCchHHHHHHH-hhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHH------HHhcCCcEEEeeCCCCcee
Q 012505 140 VDAGNGAGGFFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA------VLDNKADLGIIFDTDVDRS 212 (462)
Q Consensus 140 vd~~~G~~~~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~------v~~~~adlgia~D~DgDR~ 212 (462)
+||+||+++.+++++| +++||+++..+|+.|||.||++.|||+.+...+.+.+. +++.++|+|+++||||||+
T Consensus 229 vD~~hGag~~~~~~lL~~~lG~~~~~~i~~~pDg~Fp~~~PnP~~~~l~~lv~~~~~~~~~~~~~~aDlgiA~DgDaDR~ 308 (579)
T PLN02307 229 FDAMHGVTGAYAKRIFVEELGAPESSLLNCVPKEDFGGGHPDPNLTYAKELVKRMGLGKTSYGDEPPEFGAASDGDGDRN 308 (579)
T ss_pred EeCCCCccHHHHHHHHHHhcCCCceeeecCccCCCCCCCCCCCCHHHHHHHHHHhhhccccccccCCCEEEEeCCCCCeE
Confidence 9999999999999999 79999875258999999999999999764433333333 3455699999999999999
Q ss_pred EEEcCCCccccchhHHHHHHHHHHHhC----CCC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccC
Q 012505 213 AAVDSTGHELNRNRLIALMSAIVLEEH----PGT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIG 287 (462)
Q Consensus 213 ~~vd~~G~~l~~d~~~~Ll~~~~l~~~----~~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g 287 (462)
+++ ++|+++.++.++++++.+++... ++. .||.+.+||. +++.+++++|+++++|+||||||.++|.+.+
T Consensus 309 ~vv-~~g~~i~~d~~l~ll~~~~l~~~~~~~~g~~~VV~tv~sS~-~l~~ia~~~G~~~~~t~vGfk~I~~~m~e~~--- 383 (579)
T PLN02307 309 MIL-GKRFFVTPSDSVAIIAANAQEAIPYFSGGLKGVARSMPTSA-ALDVVAKKLNLPFFEVPTGWKFFGNLMDAGK--- 383 (579)
T ss_pred EEE-ecCcEEcCChHHHHHHHHHHHhhhhhhcCCcEEEEeChhhH-HHHHHHHHcCCeEEEcCchHHHHHHHHHhCC---
Confidence 999 78999999999999998887652 222 5887666666 6677889999999999999999999998753
Q ss_pred CcceeEeeeecceEecCCcccCcHHHHHHHHHHHHHHHHHcC---CCCCcccHHHHHhhccCCcc-cceeeeeecccCcc
Q 012505 288 EESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAG---RGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSD 363 (462)
Q Consensus 288 ~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~---~~~~~~~Ls~ll~~lp~~~~-~~~~~~~v~~~~~~ 363 (462)
++||||||||++ +++.+.+||++++++++++++...++- ++ .++|++++++|++.|. ..+.+.++. +.+
T Consensus 384 --~~~GgEeSgG~~-~~~~~dkDGi~aallllel~a~~~~~~~~~~~--~~tl~~~l~el~~~~G~~~~~~~~~~--~~~ 456 (579)
T PLN02307 384 --LSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKDVLPGGK--LVTVEDIVREHWATYGRNFYSRYDYE--NVD 456 (579)
T ss_pred --cEEEEcccCCCC-CCCCCCCcHHHHHHHHHHHHHHhCCCcccccC--cCCHHHHHHHHHHHhCCCeeeeccee--cCC
Confidence 579999999985 888888999999999999887654320 11 0168999999887542 223333443 222
Q ss_pred ccCCcccchhHHHHHHHHhhh-cCCCCCCC-------------------CCccccceEEEEe-cCeEEEEeecCCC---c
Q 012505 364 LKGGSFRDYGEAVLKHLENRV-DSDPKLQK-------------------APVNYEGQVRVSG-SGGWFLLRLSLHD---P 419 (462)
Q Consensus 364 ~~~~~~~~~~~~v~~~l~~~~-~~~~~~~~-------------------~~~~~dG~iki~~-~~~wvliRpSgTE---P 419 (462)
.+...++|++|++.. ....+..+ .....|| +|+.+ +++|+++|||||| |
T Consensus 457 ------~~~~~~~~~~lr~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~dg-lk~~~~dg~wi~~RpSGTE~~~P 529 (579)
T PLN02307 457 ------SEAANKMMDHLRDLVNKSKKGIKYGVYTLAFADDFEYTDPVDGSVSSKQG-IRFLFTDGSRIIFRLSGTGSAGA 529 (579)
T ss_pred ------HHHHHHHHHHHhcccccccCCCEecceEEEEEeeceeecCCCCCCCccCe-EEEEEcCCeEEEEEcCCCCCCCC
Confidence 123457788887631 00111000 1123688 99996 5679999999999 9
Q ss_pred eeEEEEee-CCH--HHHHHHHHHHHHHhhcCCCCChhhHHHHHh
Q 012505 420 VLPLNIEA-PSR--EDAVKLGLAVAAATKEFPALDTSALDKFVQ 460 (462)
Q Consensus 420 ~irvy~Ea-~~~--~~a~~l~~~~~~~i~~~~~~~~~~~~~~~~ 460 (462)
++|+|+|+ .+. +...+++++.+..+.. .+.+++|++|+-
T Consensus 530 kiK~Y~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 571 (579)
T PLN02307 530 TIRLYIEQYEKDPSKHGRDAQEALKPLIDV--ALKLSKLKEFTG 571 (579)
T ss_pred eEEEEEEEecCCHHHHHHHHHHHHHHHHHH--HHHHhChhHHhC
Confidence 99999999 666 7899999999998886 677889999874
No 30
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
Probab=100.00 E-value=1.4e-71 Score=575.87 Aligned_cols=389 Identities=22% Similarity=0.208 Sum_probs=306.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|++. ++++ |||||||||||++||||||++++| .+.+..++.++
T Consensus 51 ~l~~a~~~gL~~~Gv~V~~~g~~pTP~~~~a~~------~~~~-ggI~ITaSHnp~~~nGiK~~~~~G-~~~~~~e~~I~ 122 (459)
T cd03088 51 RIAAACAAALRDAGFRVVDCGAVPTPALALYAM------KRGA-PAIMVTGSHIPADRNGLKFYRPDG-EITKADEAAIL 122 (459)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHH------HcCC-cEEEEeCCCCCCCCCCEEEECCCC-CCChHHHHHHH
Confidence 689999999999999999999999999999997 3455 899999999999999999999999 45445565566
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~ 160 (462)
+... .+.+... .....+.....+..+.|++.+.+.++.. +.+++|||+||+||+++.+++++|++|||
T Consensus 123 ~~~~---~~~~~~~---~~~~~~~~~~~~~~~~Y~~~l~~~i~~~------~~~~lkIvvD~~~G~~~~~~~~ll~~lG~ 190 (459)
T cd03088 123 AALV---ELPEALF---DPAGALLPPDTDAADAYIARYTDFFGAG------ALKGLRIGVYQHSSVGRDLLVRILEALGA 190 (459)
T ss_pred HHHH---hhccccc---cccccCCcccchHHHHHHHHHHHHhCcc------ccCCCEEEEECCCCCHHHHHHHHHHHcCC
Confidence 5421 1211100 0000122333467789999998877521 23589999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012505 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (462)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~ 240 (462)
+++ .+|+. +.|+..+|+|..+++|+.+.+.+++.++|+||++||||||++++|++|+++++|++++|+++++.
T Consensus 191 ~v~-~l~~~--~~~~~~~~~~~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~i~~d~l~~l~~~~~~---- 263 (459)
T cd03088 191 EVV-PLGRS--DTFIPVDTEAVRPEDRALAAAWAAEHGLDAIVSTDGDGDRPLVADETGEWLRGDILGLLTARFLG---- 263 (459)
T ss_pred eEE-EeCCC--CCCCCCCCCcCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCceeECCCCCEECchHHHHHHHHHhC----
Confidence 998 56654 45665566666568899999999999999999999999999999999999999999999998873
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecC----------CcccCc
Q 012505 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE----------NHWLDD 310 (462)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~----------~~~~~D 310 (462)
...|| ++++|+.+++.++. ++++++|||||+|++++|++....|...++|+|+|||++|++ +.+.+|
T Consensus 264 ~~~Vv-~~v~ss~~i~~~~~--~~~~~~t~vG~~~i~~~m~~~~~~~~~~~~g~E~sg~~~~~~~~~~~~~~~~~~~~~D 340 (459)
T cd03088 264 ADTVV-TPVSSNSAIELSGF--FKRVVRTRIGSPYVIAAMAEAAAAGAGRVVGYEANGGFLLGSDIERNGRTLKALPTRD 340 (459)
T ss_pred CCEEE-EccCCcHHHHHcCC--ceeEEECCCccHHHHHHHHHHHhcCCceEEEEecccceeccchhhccccccccCCCcc
Confidence 23455 67777777776643 479999999999999999986555556789999999999986 456899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCC---
Q 012505 311 GAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSD--- 387 (462)
Q Consensus 311 gi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~--- 387 (462)
|+++++++|++|+..+ ++|++++++||++|..++ .+. .|+| +.++++|++|.+.....
T Consensus 341 gi~a~l~ile~l~~~~--------~~Ls~ll~~l~~~~~~~~---~i~-~~~~-------~~~~~~m~~l~~~~~~~~~~ 401 (459)
T cd03088 341 AVLPILAVLAAAKEAG--------IPLSELVASLPARFTASD---RLQ-NFPT-------EKSQALIARLSADPEARAAF 401 (459)
T ss_pred HHHHHHHHHHHHHhcC--------CCHHHHHHHHhhcceEhh---ccc-cCCH-------HHHHHHHHHHHhChHhhhhh
Confidence 9999999999986542 469999999998765322 222 1676 45788999997632100
Q ss_pred ----CCCCCCCccccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHH
Q 012505 388 ----PKLQKAPVNYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLA 439 (462)
Q Consensus 388 ----~~~~~~~~~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~ 439 (462)
.+...++..+|| ||+.+ +++|+|||||||||++|||+|++|++.+++++++
T Consensus 402 ~~~~~~~~~~v~~~DG-vk~~~~dg~W~liRpSgTEP~~riy~Ea~~~~~~~~l~~~ 457 (459)
T cd03088 402 FFALGGEVASIDTTDG-LRMTFANGDIVHLRPSGNAPELRCYVEADSEERARELLAR 457 (459)
T ss_pred hhccCCcccccCCCCe-EEEEECCCCEEEEECCCCCceEEEEEecCCHHHHHHHHHh
Confidence 000125667999 99997 5679999999999999999999999999999875
No 31
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=2.9e-70 Score=562.03 Aligned_cols=376 Identities=24% Similarity=0.306 Sum_probs=299.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|++. +.+.|||||||||||++||||||+. +|.+++++.++.+|
T Consensus 49 ~l~~a~~~gL~s~G~~V~d~g~~pTP~~~~~~~-------~~~~gGi~ItaSHnp~~~ngiK~~~-~G~~i~~~~~~~ie 120 (430)
T PRK14319 49 MLEAALVAGITSAGADVYRCGVLPTPALALITK-------LEDAAGVMISASHNPPEYNGLKVLM-RGYKLPDEVEERIE 120 (430)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCcHHHHHHHh-------ccCceEEEEEeCCCChHHCCEEEec-CCCCCCHHHHHHHH
Confidence 689999999999999999999999999999664 2235999999999999999999995 79888888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+... .+.+.. ....+.+... +..+.|++.+.+.++. ++.+++|||+||+||+++.++|++|++||
T Consensus 121 ~~~~---~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~------~~~~~~kvvvD~~nGa~~~~~~~ll~~Lg 186 (430)
T PRK14319 121 KEMN---EIHYSP-----YNEVGCVIDYKLAFEEYFNYIKQQYEG------LDLSGIKIVVDVANGATYELNPYILEYFG 186 (430)
T ss_pred HHHh---ccCCcc-----cccCeeEEeccchHHHHHHHHHHhcCc------cccCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 6421 111110 0112444444 3678899999887641 23468999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.|+++.|.|+.+ +.+.+.+. ++|+|+++||||||++++|++|+++++|++++|++.++++.+
T Consensus 187 ~~v~-~ln~~~dg~~~~~~~~~~~~---~~l~~~v~--~~dlGia~DgDaDR~~~vd~~G~~i~~d~~~~l~a~~ll~~~ 260 (430)
T PRK14319 187 AKVE-VVNNTPDGFNINVDCGSTHP---ENAKEKIT--NHKIAILHDGDGDRCIFLDEKGQEFHGDKIIGLTAKHLKKEG 260 (430)
T ss_pred CEEE-EECCCCCCCCCCCCCCCCCH---HHHHHHHH--hcCEEEEEcCCCceEEEECCCCCEeChhHHHHHHHHHHHHhC
Confidence 9998 68999999999877777654 44556663 469999999999999999999999999999999999998864
Q ss_pred C--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 P--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 ~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
+ +..||.+..||. ..+.+++++|++++|||||+++++++|.+.+ .+||||+|||++|+++.+.+||++++++
T Consensus 261 ~~~~~~vV~~v~ss~-~~~~~~~~~g~~v~~t~~G~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ 334 (430)
T PRK14319 261 RLKNDVVVGTILSNM-GLEVFLKNNGIKVVRTKVGDRYVLEEMLKLN-----ATLGGERSGHIIYLDKSTTGDGLITALE 334 (430)
T ss_pred CCCCCeEEEeecCch-HHHHHHHHCCCcEEEeCCchHHHHHHHHHcC-----CEEEEcccceEEEhhccCCCcHHHHHHH
Confidence 3 335776665555 5666778899999999999999999999866 4699999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (462)
+|++|+..+ ++|+++++++|.++... .++++. .+. . . + .+++.+ .+
T Consensus 335 lle~l~~~~--------~~ls~l~~~~p~~~~~~-~~v~~k--~~~-----~-~-~---~~~~~~-------------~~ 380 (430)
T PRK14319 335 TLSVMVKSG--------KKLSDLSNEIPDYPQVM-INVKVK--NKE-----V-Y-K---HKEVFK-------------LI 380 (430)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccceee-EEEEeC--Ccc-----c-c-c---cHHHHH-------------HH
Confidence 999998753 46999999999764322 222221 000 0 0 0 011111 14
Q ss_pred cceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 398 EGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 398 dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
|| + ++||+|||||||||++|||+||.|++.++++++.+.++|++|-+
T Consensus 381 ~~-~----~~gw~LiRpS~TeP~irv~~Ea~~~~~a~~l~~~~~~~v~~~~~ 427 (430)
T PRK14319 381 KS-I----KDYRVIVRPSGTEPVVRVLVEGPDEEYITNIANDIAGLIKELDK 427 (430)
T ss_pred hC-C----CCeEEEEecCCCccEEEEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 56 4 37899999999999999999999999999999999999987643
No 32
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-65 Score=505.74 Aligned_cols=410 Identities=32% Similarity=0.376 Sum_probs=312.2
Q ss_pred HHHHHHHHHHhCCCcEEEeC-CCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCC-CCHHHHHHH
Q 012505 2 LQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGL-GKPDIKDIL 79 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g-~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~-~~~~~~~~i 79 (462)
|+++++++|..+|++|++++ .+|||++.|++. .|+|++||||||||||++|||+|||+++|+| ++|+.++|.
T Consensus 118 fA~l~a~vf~~~g~~v~lf~~~v~TP~vpfav~------~l~~dAgIMiTASHnPk~dNGyKvYwsNG~qii~PhD~~I~ 191 (607)
T KOG1220|consen 118 FAELVAAVFLLNGFKVYLFSELVPTPFVPFAVL------TLGADAGIMITASHNPKEDNGYKVYWSNGAQIISPHDEKIS 191 (607)
T ss_pred HHHHHHHHHHhCCceEEEeccccCCCcchhHHH------HhccCceEEEeccCCccccCCEEEEecCCccccCchhHHHH
Confidence 68999999999999999997 999999999997 6899999999999999999999999999996 677777777
Q ss_pred HHHHHHhhhhh--hcccccccccCCcceEE-E-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHH
Q 012505 80 ERAADIYKQFM--VEGLTNLEKQTSTSIKR-V-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVL 155 (462)
Q Consensus 80 e~~~~~~~~~~--~~~~~~~~~~~~~~i~~-~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll 155 (462)
+.+....+... |++ ..+ ... ..... . -.++.|++.+.+.+..-. ...+..+++++||+++||+++.++.++|
T Consensus 192 ~~~~~nl~p~~s~wd~-slv-~s~-~l~~d~~~~~~~~~~e~~k~~l~~~~-~e~n~~s~~~fVyta~hGvG~~F~~~al 267 (607)
T KOG1220|consen 192 DSIEANLEPRLSSWDD-SLV-KSH-PLLHDILAVIIPPYFEVYKELLPCFH-REANPLSGLKFVYTAGHGVGGFFVKKAL 267 (607)
T ss_pred HHHHhccCcccchhhh-hHH-hcc-hhhcCchhccchHHHHHHHhcCccHh-hhhccCCCceEEEecCCCccHHHHHHHH
Confidence 66543332111 221 000 000 00111 1 144567777776543211 1124678999999999999999999999
Q ss_pred hhcCCcc--ccccccccCCCCCC-CCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcC---CCccccchhHHH
Q 012505 156 EPLGAKT--SGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDS---TGHELNRNRLIA 229 (462)
Q Consensus 156 ~~lg~~v--~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~---~G~~l~~d~~~~ 229 (462)
+++||.. ....+++|||.||+ +.||||++.+|+...+.+.++++|+++++|||+||+++++. +|+.++||++++
T Consensus 268 ~~~~~~~~~~v~eq~~Pdp~FPt~~~PNPEek~aL~ls~~~a~~n~~dlvlanDpDaDR~avaek~~G~wr~fnGNElgA 347 (607)
T KOG1220|consen 268 EKLGLDTMISVPEQLEPDPMFPTVPFPNPEEKGALDLSIKAALKNSADLVLANDPDADRFAVAEKVSGEWRVFNGNELGA 347 (607)
T ss_pred HHhCCCccccchhhcCCCCCCCCCCCCCcchHHHHHHHHHHHhccCCcEEEecCCCcchhhheeccCCcceeccchHHHH
Confidence 9999986 22578999999999 89999999999999999999999999999999999999976 999999999999
Q ss_pred HHHHHHHHhCCCCeEE-----EeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecC
Q 012505 230 LMSAIVLEEHPGTTIV-----TDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE 304 (462)
Q Consensus 230 Ll~~~~l~~~~~~~vv-----~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~ 304 (462)
|+++++++.+++..++ .+...|+.+.+.||+..|++..+|.|||||+++++.+.+.+|++++|++|||+||.|+.
T Consensus 348 Ll~~~~le~~k~~~~~~~~~ml~s~vSs~l~~~ia~~eGf~~~~tltGFKwvgnrAieL~k~G~~v~fA~Ees~gym~g~ 427 (607)
T KOG1220|consen 348 LLSWWVLEEHKGSTPVQDVSMLNSTVSSGLTRFIAEIEGFHHEETLTGFKWVGNRAIELEKDGKEVHFAFEESIGYMFGE 427 (607)
T ss_pred HHHHHHHHhccCCCccchhhhhhhHHHHHHHHHHHHHhCceeeeccccchhhhHHHHHHHhcCceeeeeehhhcCccccc
Confidence 9999999999877655 34445666889999999999999999999999999999999999999999999999999
Q ss_pred CcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhh
Q 012505 305 NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRV 384 (462)
Q Consensus 305 ~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~ 384 (462)
.++.+||+++++.++.+++....+++. +|++.+.++.+.|..+.....+. .|+. .+....+.+.|++..
T Consensus 428 ~~~dkDGv~a~v~~a~~~~~lr~~~~~----sl~e~l~~l~e~yg~~~~~~~y~-l~~~------pe~~~~lf~~lR~~~ 496 (607)
T KOG1220|consen 428 NHLDKDGVSAAVKFASMACRLRLAGNL----SLSEVLEDLYERYGYHSTANSYR-LCID------PEVIKALFDGLRNYD 496 (607)
T ss_pred CccCcchHHHHHHHHHHHHHHHHhcCC----CHHHHHHHHHHhhCccceeeEEE-EecC------CchhHHHHHHHhhcc
Confidence 999999999999998888776555553 59999999887653222111111 1322 011123333333322
Q ss_pred cC------C-------------C--------CCCCCCccccc-eEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHH
Q 012505 385 DS------D-------------P--------KLQKAPVNYEG-QVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSRED 432 (462)
Q Consensus 385 ~~------~-------------~--------~~~~~~~~~dG-~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~ 432 (462)
.+ . . .+...+...+. +|.+.+ +++|+++|-|+|||++++|+|+.....
T Consensus 497 ~~~~yp~~ig~e~ev~~~rdlT~g~d~s~~d~ka~lpv~~ss~~vTf~~~~~~~~tlR~SgtePkik~yie~c~~~~ 573 (607)
T KOG1220|consen 497 TGYIYPKKIGEEFEVVNVRDLTTGYDVSSPDHKAVLPVSTSSQMVTFTFNNGGVVTLRTSGTEPKIKLYIEACLPPD 573 (607)
T ss_pred ccccccchhcccceeeeeeeceeeeecCCCCCccccccccccceeEEeccCcEEEEEecCCCCcchhhhHHhhCCcc
Confidence 10 0 0 01111222233 244443 468999999999999999999955333
No 33
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.3e-64 Score=508.82 Aligned_cols=338 Identities=33% Similarity=0.400 Sum_probs=279.5
Q ss_pred hhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHHHhhhhhhcccccccccCCcc
Q 012505 25 TPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTSTS 104 (462)
Q Consensus 25 tP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~~~~~~~~~~~~~~~~~~~ 104 (462)
||.+.+.+.. -++..|||||||||||++||||||++++|.+++++.++.+|+.... +.+.+.. ....+.
T Consensus 16 tpe~~~~lg~-----a~g~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~-~~~~~~~-----~~~~~~ 84 (355)
T cd03084 16 TPETAVALGQ-----AIGSTGGIMITASHNPPEDNGIKFVDPDGEPIASEEEKAIEDLAEK-EDEPSAV-----AYELGG 84 (355)
T ss_pred CHHHHHHHHH-----HHhcceeEEEEeCCCChhHCcEEEecCCCCcCCHHHHHHHHHHHhc-ccccccc-----cccCCC
Confidence 5666554332 2345699999999999999999999999999988888877764421 1111100 001222
Q ss_pred -eEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCc
Q 012505 105 -IKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPED 183 (462)
Q Consensus 105 -i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~ 183 (462)
+...++.+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++|||+++ .+|+.|||.||.+.|+|..
T Consensus 85 ~~~~~~~~~~Y~~~l~~~i~~~~----i~~~~~kvvvD~~~G~~~~~~~~ll~~lg~~v~-~~n~~~d~~F~~~~p~p~~ 159 (355)
T cd03084 85 SVKAVDILQRYFEALKKLFDVAA----LSNKKFKVVVDSVNGVGGPIAPQLLEKLGAEVI-PLNCEPDGNFGNINPDPGS 159 (355)
T ss_pred eEEEcCCHHHHHHHHHHhcChhh----hccCCCEEEEECCCchHHHHHHHHHHHcCCcEE-EEcCcCCCCCCCCCCCCCc
Confidence 3345788999999988876422 345789999999999999999999999999998 6999999999999999998
Q ss_pred HHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh-CCCCeEEEeccCChhHHHHHHHHc
Q 012505 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE-HPGTTIVTDSVTSDGLTTFIEKKL 262 (462)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~-~~~~~vv~~~~ss~~~~~~ia~~~ 262 (462)
+++++.+.+.+++.++|+|+++||||||+.++|++|+++++|++++|+++++++. .++..||. +++|+.+++.+++++
T Consensus 160 ~~~l~~l~~~v~~~~adlG~a~DgDgDRl~~vd~~G~~l~~d~~~al~~~~l~~~~~~~~~vv~-~v~ss~~i~~ia~~~ 238 (355)
T cd03084 160 ETNLKQLLAVVKAEKADFGVAFDGDADRLIVVDENGGFLDGDELLALLAVELFLTFNPRGGVVK-TVVSSGALDKVAKKL 238 (355)
T ss_pred hhhHHHHHHHHHhcCCCEEEEEcCCCceeEEECCCCceeCHhHHHHHHHHHHHHhcCCCCCEEE-EccchHHHHHHHHHc
Confidence 8999999999999999999999999999999999999999999999999999864 34555775 555556778899999
Q ss_pred CCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHh
Q 012505 263 GGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVD 342 (462)
Q Consensus 263 g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~ 342 (462)
|++++|||||++|++++|.+.+ +++|||+|||++|+++.+.+|||++++++|++|+..+ ++|+++++
T Consensus 239 g~~v~~t~~G~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~~le~la~~~--------~~Ls~l~~ 305 (355)
T cd03084 239 GIKVIRTKTGFKWVGEAMQEGD-----VVLGGEESGGVIFPEFHPGRDGISAALLLLEILANLG--------KSLSELFS 305 (355)
T ss_pred CCcEEEecCcHHHHHHHHHhcC-----ceEEecCcCCEEECCcCCCCCHHHHHHHHHHHHHHhC--------CCHHHHHH
Confidence 9999999999999999998754 5799999999999999999999999999999998753 45999999
Q ss_pred hccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccceEEEEecCeEEEEeecCCCceeE
Q 012505 343 GLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDPVLP 422 (462)
Q Consensus 343 ~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG~iki~~~~~wvliRpSgTEP~ir 422 (462)
++|.++..+ . . +. ||+|||||||||++|
T Consensus 306 ~~p~~~~~~-----------~-----------------------------~-------v~-----gW~lirps~tep~~r 333 (355)
T cd03084 306 ELPRYYYIR-----------L-----------------------------K-------VR-----GWVLVRASGTEPAIR 333 (355)
T ss_pred HhhHhcccc-----------c-----------------------------c-------cc-----eEEEEecCCCCcEEE
Confidence 998643210 0 0 11 799999999999999
Q ss_pred EEEeeCCHHHHHHHHHHHHHHh
Q 012505 423 LNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 423 vy~Ea~~~~~a~~l~~~~~~~i 444 (462)
||+||.|++++++|++.+.+++
T Consensus 334 i~~Ea~~~e~a~~l~~~~~~~~ 355 (355)
T cd03084 334 IYAEADTQEDVEQIKKEARELV 355 (355)
T ss_pred EEEeeCCHHHHHHHHHHHHhhC
Confidence 9999999999999999887753
No 34
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=4.3e-57 Score=468.30 Aligned_cols=368 Identities=18% Similarity=0.147 Sum_probs=268.9
Q ss_pred CeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHHHhhhh--------h------h--c---c--ccccccc--
Q 012505 44 DGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYKQF--------M------V--E---G--LTNLEKQ-- 100 (462)
Q Consensus 44 ~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~~~~--------~------~--~---~--~~~~~~~-- 100 (462)
.+||||||||||++|||||++.++|.++.++++..++......... . . . . +....|.
T Consensus 36 ~~gimITaSHNP~~~NGiK~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vg~D~R~ss 115 (513)
T cd03086 36 TIGVMITASHNPVEDNGVKIVDPDGEMLEESWEPYATQLANASDDELLVLVLMLISVKELNIDLSVPANVFVGRDTRPSG 115 (513)
T ss_pred ceEEEECCCcCCcccCeEEEEcCCCCCCCHHHHHHHHHHhhCCCHHHHHHHHHHHhhhhhccCCCCCCEEEEEeCCChhH
Confidence 6899999999999999999999999988877555555432111000 0 0 0 0 0000000
Q ss_pred ------------CCc----ceEE--------------------EccHHHHHHHHHHHHHhhcC-CCCCCCCCcEEEEeCC
Q 012505 101 ------------TST----SIKR--------------------VDYMSVYTSDLVKAVRRAAG-DIEKPLEGFHIVVDAG 143 (462)
Q Consensus 101 ------------~~~----~i~~--------------------~~~~~~Y~~~l~~~~~~~~~-~~~~~~~~~kvvvd~~ 143 (462)
..| .++. ....+.|++++...+..-.. ...+..+++||||||+
T Consensus 116 ~~l~~a~~~gl~~~G~~V~d~g~~~TP~~~~~v~~~~~~g~~~~~~~~~Y~~~l~~~f~~lv~~~~~~~~~~~kVvvD~a 195 (513)
T cd03086 116 PALLQALLDGLKALGGNVIDYGLVTTPQLHYLVRAANTEGAYGEPTEEGYYEKLSKAFNELYNLLQDGGDEPEKLVVDCA 195 (513)
T ss_pred HHHHHHHHHHHHHCCCeEEEccCcCcHHHHHHHHhcCCCCccCCccHHHHHHHHHHHHHHHHhhccccccCCCEEEEECC
Confidence 000 0000 01135688888887433222 1234567899999999
Q ss_pred CCCchHHHHHHHhhcC--CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcC----CcEEEeeCCCCceeEEEcC
Q 012505 144 NGAGGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNK----ADLGIIFDTDVDRSAAVDS 217 (462)
Q Consensus 144 ~G~~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~----adlgia~D~DgDR~~~vd~ 217 (462)
||+++.+++++|+.|| |+++ .+|++|||.| +.|+|-.+++++.+++.+++.+ +|+|++|||||||++++|+
T Consensus 196 NGag~~~~~~ll~~Lg~~~~v~-~in~~~dg~~--~~n~~~ga~~l~~l~~~v~~~~~~~~adlgiA~DGDADRl~~vd~ 272 (513)
T cd03086 196 NGVGALKLKELLKRLKKGLSVK-IINDGEEGPE--LLNDGCGADYVKTKQKPPRGFELKPPGVRCCSFDGDADRLVYFYP 272 (513)
T ss_pred CcHHHHHHHHHHHHcCCCcEEE-EEccCCCCcc--cCCCCcccccHHHHHHHHHhcCCCCCccEEEEECCCCCcEEEEEe
Confidence 9999999999999999 9998 6999999986 2222222456888888888876 9999999999999999999
Q ss_pred CC----ccccchhHHHHHHHHHHHhC----C-CC---eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcc
Q 012505 218 TG----HELNRNRLIALMSAIVLEEH----P-GT---TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNS 285 (462)
Q Consensus 218 ~G----~~l~~d~~~~Ll~~~~l~~~----~-~~---~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~ 285 (462)
+| ++++||++++|+++++++.. + +. .||.+..||..+.+.+.+.+|+++++|+||+||+.++|.+.+.
T Consensus 273 ~g~~~~~~l~GD~i~aL~a~~ll~~~~~~~~~~~~~~~VV~tv~sn~~~~~~l~~~~G~~~~~t~vG~k~v~~~m~e~~~ 352 (513)
T cd03086 273 DSSNKFHLLDGDKIATLFAKFIKELLKKAGEELKLTIGVVQTAYANGASTKYLEDVLKVPVVCTPTGVKHLHHAAEEFDI 352 (513)
T ss_pred cCCCceEEECHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEeccchHHHHHHHHHcCceEEEeCCcHHHHHHHHHHhCc
Confidence 88 99999999999999998742 1 21 6888888888888888776899999999999999999998764
Q ss_pred cCCcceeEeeeecc--eEecCC------------------------------cccCcHHHHHHHHHHHHHHHHHcCCCCC
Q 012505 286 IGEESHLAIETSGH--GALKEN------------------------------HWLDDGAYLMVKLLNKLASARAAGRGGG 333 (462)
Q Consensus 286 ~g~~~~~g~E~sG~--~~~~~~------------------------------~~~~Dgi~aa~~ll~~l~~~~~~~~~~~ 333 (462)
.+|||+||| ++|+++ .+.+||+++++++++.|+..+
T Consensus 353 -----~~ggE~sGHgtvif~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~gDgi~~al~vl~~l~~~~------- 420 (513)
T cd03086 353 -----GVYFEANGHGTVLFSESALAKIEENSSLSDEQEKAAKTLLAFSRLINQTVGDAISDMLAVELILAALG------- 420 (513)
T ss_pred -----ceEEeccCCEEEEECchHHhhhhhhccccchhhhHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHhC-------
Confidence 599999999 999997 558999999999989887643
Q ss_pred cccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccceEEEEecCeEEEEe
Q 012505 334 SKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLR 413 (462)
Q Consensus 334 ~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG~iki~~~~~wvliR 413 (462)
++|+++++.++.+.. ...++++. .+. +.++.+. ....... ......+|| +++.+++||++||
T Consensus 421 -~~lsel~~~y~~~p~-~~~~v~v~--~~~---------~~~~~~~-e~~~~~p---~~l~~~iDG-~~~~~~~gr~lVR 482 (513)
T cd03086 421 -WSPQDWDNLYTDLPN-RQLKVKVP--DRS---------VIKTTDA-ERRLVEP---KGLQDKIDA-IVAKYNNGRAFVR 482 (513)
T ss_pred -CCHHHHHhhchhcCe-eeeEEEec--Ccc---------chhhhhH-Hhhcccc---HHHHHHHHH-HHhcCCCeeEEEe
Confidence 459999997765421 12233332 110 1111111 1100000 011345899 9998888999999
Q ss_pred ecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012505 414 LSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 414 pSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i 444 (462)
||||||++|||+||.|++.++++++.+.+.|
T Consensus 483 pSGTEp~iRvyaEA~t~~~~~~l~~~i~~~v 513 (513)
T cd03086 483 PSGTEDVVRVYAEAATQEEADELANEVAELV 513 (513)
T ss_pred cCCCCcEEEEEEEeCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999887754
No 35
>PLN02895 phosphoacetylglucosamine mutase
Probab=100.00 E-value=1.3e-50 Score=418.00 Aligned_cols=390 Identities=19% Similarity=0.193 Sum_probs=277.8
Q ss_pred HHHHHHHHhCCCcEEEe-CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHH
Q 012505 4 DAVSRGITGAGLDVVQY-GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERA 82 (462)
Q Consensus 4 ~a~a~gL~s~Gi~V~~~-g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie~~ 82 (462)
|+-+..|.+.|++|..+ ...|+ ++++.+||||||||||++|||+|+++++|.++.++++......
T Consensus 32 R~~a~~l~~~~~r~~~~~~~r~~--------------~~~~~~gVmITaSHnp~~~nG~K~~~~~G~~~~~~~e~~a~~l 97 (562)
T PLN02895 32 RTDASLLESTVFRVGILAALRSL--------------KTGAATGLMITASHNPVSDNGVKIVDPSGGMLPQAWEPFADAL 97 (562)
T ss_pred HHHHHHHHhcCeEEEEeCCCCcc--------------ccCCCcEEEEeCCCCCcccCcEEEECCCCCcCCHHHHHHHHHH
Confidence 56788999999999987 55444 1257899999999999999999999999999887754444333
Q ss_pred HHH---------hhhhhh---cc-----------cccccccC--------------Cc-ceEE-----------------
Q 012505 83 ADI---------YKQFMV---EG-----------LTNLEKQT--------------ST-SIKR----------------- 107 (462)
Q Consensus 83 ~~~---------~~~~~~---~~-----------~~~~~~~~--------------~~-~i~~----------------- 107 (462)
.+. ...+.. .+ +....|.. .+ .+..
T Consensus 98 aN~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~V~vG~DtR~Ss~~l~~a~~~gl~~~G~~v~d~G~~tTP~l~~~v~~~n 177 (562)
T PLN02895 98 ANAPDPDALVQLIREFVKKENIPAVGGNPPAEVLLGRDTRPSGPALLAAALKGVRAIGARAVDMGILTTPQLHWMVRAAN 177 (562)
T ss_pred hCCCCHHHHHHHHHHHHHHhCCCccccCcCCEEEEEecCCCCHHHHHHHHHHHHHHCCCCEEEeCcCCcHHHHHHHHhcC
Confidence 211 000000 00 00000100 00 0000
Q ss_pred ---EccHHHHHHHHHHHHHhhcCCCCC----CCCCcEEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCC-CCCCC
Q 012505 108 ---VDYMSVYTSDLVKAVRRAAGDIEK----PLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMF-PNHIP 179 (462)
Q Consensus 108 ---~~~~~~Y~~~l~~~~~~~~~~~~~----~~~~~kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f-~~~~p 179 (462)
....+.|++.+.+.+..-...... ...+.+|+|||+||+++..++++++.||+.++..+|+.|||.| +++.+
T Consensus 178 ~~~~~~e~~Y~~~l~~~f~~l~~~~~~~~~~~~~~~kvvVDcANGvg~~~~~~l~~~Lg~~~i~~iN~~~dG~~~lN~~c 257 (562)
T PLN02895 178 KGMKATESDYFEQLSSSFRALLDLIPNGSGDDRADDKLVVDGANGVGAEKLETLKKALGGLDLEVRNSGKEGEGVLNEGV 257 (562)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCCCccccccCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEeecCCCCCCCCCCCC
Confidence 012466999998877654321111 1223689999999999999999999999988745889999886 33445
Q ss_pred CCCcHHHHHHHHHHHHhcCC---cEE---EeeCCCCceeEEEcCCC-----ccccchhHHHHHHHHHHHhC---------
Q 012505 180 NPEDKTAMKAIIQAVLDNKA---DLG---IIFDTDVDRSAAVDSTG-----HELNRNRLIALMSAIVLEEH--------- 239 (462)
Q Consensus 180 ~P~~~~~l~~l~~~v~~~~a---dlg---ia~D~DgDR~~~vd~~G-----~~l~~d~~~~Ll~~~~l~~~--------- 239 (462)
.|+ .++.++ .+.+ ++ |+| ++|||||||++++|++| ++++||++++|+|.++.+..
T Consensus 258 Gad---~v~~lq-~vp~-~~~~~d~G~~~~sfDGDADRlv~~d~~g~~~~~~llDGDkI~~L~A~~l~~~l~~~~~~~~~ 332 (562)
T PLN02895 258 GAD---FVQKEK-VPPT-GFASKDVGLRCASLDGDADRLVYFYVSSAGSKIDLLDGDKIASLFALFIKEQLRILNGNGNE 332 (562)
T ss_pred ccC---cHHHHH-hhhc-cCCccCCCCcceEEcCCCCEEEEEEcCCCcccCeEeCHHHHHHHHHHHHHHHhhhccccccc
Confidence 554 456666 6666 77 899 99999999999999888 89999999999999997652
Q ss_pred -C-----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc--eEecCCcc----
Q 012505 240 -P-----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH--GALKENHW---- 307 (462)
Q Consensus 240 -~-----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~~~~---- 307 (462)
+ +..||.+..+|..+.+++.+.+|+++++||||.|++.++|.+.+. .+|||.||| ++|+++.+
T Consensus 333 ~~~~~~l~~gVVqTayaNgast~yl~~~lg~~v~~t~tGvk~l~~~a~e~di-----gvyfEaNGHGTviFs~~~~~~~~ 407 (562)
T PLN02895 333 KPEELLVRLGVVQTAYANGASTAYLKQVLGLEVVCTPTGVKYLHEAAAEFDI-----GVYFEANGHGTVLFSERFLDWLE 407 (562)
T ss_pred ccccccCCCeEEEeccccHHHHHHHHHhcCCeEEEEeCchHHHHHHHHhcCc-----eEEEccCCCeEEEEChHHHHHHh
Confidence 2 336999999999999888665899999999999999999998763 599999999 88988655
Q ss_pred --------------------------------cCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhh---ccCCcccce
Q 012505 308 --------------------------------LDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDG---LEEPGFAVE 352 (462)
Q Consensus 308 --------------------------------~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~---lp~~~~~~~ 352 (462)
.+|||+.++++++.|...+ ++++++++. +|....
T Consensus 408 ~~~~~~~~~~~~~~~~~a~~~L~~~~~linq~vGDai~~~L~vl~iL~~~~--------~sl~e~~~~y~dlP~~~~--- 476 (562)
T PLN02895 408 AAAAELSSKAKGSEAHKAARRLLAVSRLINQAVGDALSGLLLVEAILQYRG--------WSLAEWNALYQDLPSRQL--- 476 (562)
T ss_pred hhhhccccccccchhhHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHhC--------CCHHHHHhhCccCCceeE---
Confidence 6999999998888776642 469999994 444322
Q ss_pred eeeeecccCccccCCcccchhHHHH--HHHHhhhcCCCCCCCCCccccceEEE-EecCeEEEEeecCCCceeEEEEeeCC
Q 012505 353 LRLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDSDPKLQKAPVNYEGQVRV-SGSGGWFLLRLSLHDPVLPLNIEAPS 429 (462)
Q Consensus 353 ~~~~v~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~~~~~~~~~~~~dG~iki-~~~~~wvliRpSgTEP~irvy~Ea~~ 429 (462)
++++...+ -.+ ..+....++ ..|.+ .+| .++ .+++||++||||||||++|||+||.+
T Consensus 477 -kv~V~dr~-~~~---t~~~e~~~v~P~~Lq~-------------~ID--~~v~~~~~Gr~lvRpSGTEp~vRv~~Ea~t 536 (562)
T PLN02895 477 -KVKVADRT-AIT---TTDAETVVVRPAGLQD-------------AID--AEVAKYPRGRAFVRPSGTEDVVRVYAEAST 536 (562)
T ss_pred -eeEEccCc-ccc---ccchhhhcccHHHHHH-------------HHH--HHhcccCCceEEEEcCCCCcEEEEEEEECC
Confidence 22232100 000 001011111 22221 122 223 35679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCC
Q 012505 430 REDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 430 ~~~a~~l~~~~~~~i~~~~ 448 (462)
++.++++++.+.+.|++..
T Consensus 537 ~~~~~~l~~~v~~~v~~~~ 555 (562)
T PLN02895 537 QEAADSLAREVARLVYDLL 555 (562)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987643
No 36
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=100.00 E-value=5e-51 Score=424.31 Aligned_cols=371 Identities=19% Similarity=0.234 Sum_probs=266.8
Q ss_pred CCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHHHh--h-------hhhhc---c-----------------
Q 012505 43 VDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIY--K-------QFMVE---G----------------- 93 (462)
Q Consensus 43 a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~--~-------~~~~~---~----------------- 93 (462)
+.+||||||||||++|||+|+++++|+++.++++..++...... + .+..+ +
T Consensus 75 ~~~GImiTASHNp~~~NG~K~~~~~G~~l~~~~~~~i~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (585)
T PTZ00302 75 KSVGVMITASHNPIQDNGVKIIDPDGGMLEESWEKICTDFANARTGEDLVSVLMDCLTEHGIKLSNLKLDLNKSNCSKAK 154 (585)
T ss_pred cceeEEEeCCCCCcccCCEEEECCCCCcCCCcHHHHHHHHHhccCHHHHHHHHHHHHHHhCCCccccccccccccCCCCE
Confidence 78999999999999999999999999998887777766543211 0 00000 0
Q ss_pred --ccccccc-------------C--Cc-ceEEE------------------------ccHHHHHHHHHHHHHhhcCCCCC
Q 012505 94 --LTNLEKQ-------------T--ST-SIKRV------------------------DYMSVYTSDLVKAVRRAAGDIEK 131 (462)
Q Consensus 94 --~~~~~~~-------------~--~~-~i~~~------------------------~~~~~Y~~~l~~~~~~~~~~~~~ 131 (462)
+....|. . .+ .+..+ ...+.|++.+...+..-......
T Consensus 155 V~vGrDtR~Ss~~L~~al~~gl~~~~G~~v~d~G~~tTP~l~y~v~~~n~~~~~~~~~~e~~Y~~~~~~~f~~l~~~~~~ 234 (585)
T PTZ00302 155 VHVGRDTRPSSPELVSALLRGLKLLIGSNVRNFGIVTTPQLHFLVAFANGLGVDVVESSDELYYAYLLAAFKELYRTLQE 234 (585)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHhcCCcEEEeCCCCcHHHHHHHHHhCCCccccCCCcHHHHHHHHHHHHHHHHhhCCc
Confidence 0000000 0 00 01100 12466888888777643321111
Q ss_pred C-------CCCcEEEEeCCCCCchHHHHHHHhhc---CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcE
Q 012505 132 P-------LEGFHIVVDAGNGAGGFFAAKVLEPL---GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADL 201 (462)
Q Consensus 132 ~-------~~~~kvvvd~~~G~~~~~~~~ll~~l---g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adl 201 (462)
. ...-+|+|||+||+++..++++++.| ||+++ .+|+.+|+.| +.++|-.++.++.+++.++..++|+
T Consensus 235 ~~~~~~~~~~~~kVvVD~ANGvg~~~~~~ll~~L~~~g~~v~-~in~~~dg~~--~lN~~cGad~vk~lq~~p~~~~ad~ 311 (585)
T PTZ00302 235 GGPVDLTQNNSKILVVDCANGVGGYKIKRFFEALKQLGIEII-PININCDEEE--LLNDKCGADYVQKTRKPPRAMKEWP 311 (585)
T ss_pred cccccccccCCCeEEEECCCcHHHHHHHHHHHHhhhCCCEEE-EEecCCCCCC--CCCCCCccccHHHHHHHHHhcCCCc
Confidence 0 11258999999999999999999999 88888 6899999875 2333333456888999999999999
Q ss_pred E------EeeCCCCceeEEEcC--CC----ccccchhHHHHHHHHHHHh----CCCC----eEEEeccCChhHHHHHHHH
Q 012505 202 G------IIFDTDVDRSAAVDS--TG----HELNRNRLIALMSAIVLEE----HPGT----TIVTDSVTSDGLTTFIEKK 261 (462)
Q Consensus 202 g------ia~D~DgDR~~~vd~--~G----~~l~~d~~~~Ll~~~~l~~----~~~~----~vv~~~~ss~~~~~~ia~~ 261 (462)
| ++|||||||++++|+ +| ++++||++++|+|.++.+. .++. .||.+..+|..+.+++.+.
T Consensus 312 G~~~~~~~sfDGDADRlv~~d~~~~g~~~~~lldGDkI~~L~A~~l~~~l~~~~~~~~l~igVVqTayaNgast~yl~~~ 391 (585)
T PTZ00302 312 GDEETRVASFDGDADRLVYFFPDKDGDDKWVLLDGDRIAILYAMLIKKLLGKIQLKKKLDIGVVQTAYANGASTNYLNEL 391 (585)
T ss_pred CccCCeeEEECCCCCeEEEEEecCCCCccceecCHHHHHHHHHHHHHHHhhhcCCCCCccceEEEeccCCHHHHHHHHHh
Confidence 9 999999999999988 78 9999999999999998763 2233 6999999999999988665
Q ss_pred cC-CeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc--eEecC------------------------------Cccc
Q 012505 262 LG-GKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH--GALKE------------------------------NHWL 308 (462)
Q Consensus 262 ~g-~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~------------------------------~~~~ 308 (462)
+| ++|++||||.|++.++|.+.+ ..+|||.||| ++|++ +...
T Consensus 392 lg~~~v~~t~tGvk~l~~~a~e~d-----i~iyfEaNGHGTvif~~~~~~~~~~~~~~~~~~~~a~~~L~~~~~l~n~~v 466 (585)
T PTZ00302 392 LGRLRVYCAPTGVKNLHPKAHKYD-----IGIYFEANGHGTVLFNEKALAEWAKFLAKQNALNSACRQLEKFLRLFNQTI 466 (585)
T ss_pred cCCeeEEEEeCchHHHHHHHHhcC-----CeEEEccCCCEEEEECcHHHhhhhhhccccchhhhHHHHHHHhHhhhcCCC
Confidence 89 999999999999999999876 3599999999 88988 5667
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHH--HHHHhhhcC
Q 012505 309 DDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDS 386 (462)
Q Consensus 309 ~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~ 386 (462)
.|||+.++++++.|+..+ ++++++++.++.+ .....++++.... -. ...+....++ ..|.+
T Consensus 467 GDai~~~L~v~~iL~~~~--------~sl~e~~~~y~dl-P~~~~kv~v~~r~-~i---~t~d~e~~~v~P~~Lq~---- 529 (585)
T PTZ00302 467 GDAISDLLAVELALAFLG--------LSFQDWLNLYTDL-PSRQDKVTVKDRT-LI---TNTEDETRLLEPKGLQD---- 529 (585)
T ss_pred ccHHHHHHHHHHHHHhhC--------CCHHHHHhhcccC-CceeeeeEeccCc-cc---ccchHhhhcccHHHHHH----
Confidence 999999999888877643 4599999954332 0112223332100 00 0001011122 22322
Q ss_pred CCCCCCCCccccceEEEEe-cCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 387 DPKLQKAPVNYEGQVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 387 ~~~~~~~~~~~dG~iki~~-~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
.+|+ +.+.+ ++||++||||||||++|||+||.+++.++++++.+.+.|+++.
T Consensus 530 ---------~id~-~~~~~~~~gr~lvRpSGTEp~vRvyaEA~t~~~a~~l~~~v~~~v~~~~ 582 (585)
T PTZ00302 530 ---------KIDA-IVSKYDNAARAFIRPSGTEPVVRVYAEAPTLEQADELANEVKGLVLRYC 582 (585)
T ss_pred ---------HHHH-HHhhccCCceEEEEcCCCCcEEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 2344 44445 7899999999999999999999999999999999999997654
No 37
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-45 Score=353.80 Aligned_cols=415 Identities=19% Similarity=0.174 Sum_probs=281.7
Q ss_pred HHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 4 DAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 4 ~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
+.+++.|+++|++++.. |.+|||.++++++.++.+ .....+||++|+|||||++.|||..-++|++.+++++..|+
T Consensus 72 ~~~lev~aANgv~~iv~~~~g~~~TPAaSh~I~t~n~k-~k~~~~GIvlT~SHNPP~D~GIKYN~~nGGPA~~~~T~aI~ 150 (524)
T COG0033 72 QSALEVLAANGVEVIVQGQGGFTPTPAASHAILTHNGK-YKALADGIVLTPSHNPPEDGGIKYNPPNGGPAPEKVTDAIE 150 (524)
T ss_pred HHHHHHHHhcCceEEEecCCCccCchHHHHHHHhhccc-ccccCCeEEEcCCCCCcccCCcccCCCCCCCCChHHHHHHH
Confidence 46788999999999865 799999999999865432 12236679999999999999999999999999998887776
Q ss_pred HHHHHhhhhhhccc---ccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012505 81 RAADIYKQFMVEGL---TNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (462)
Q Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~ 157 (462)
......-.....++ +.........+..+|+...|++.|.+.++..++ +....++++|++||++...+.+|+++
T Consensus 151 ~ra~~~~k~~~~~v~r~~~~~~~~~~~v~~~D~v~~Yv~~l~~i~D~daI----r~~~~~l~~D~l~g~t~~Y~~~I~e~ 226 (524)
T COG0033 151 ARANDLYKIGLLDVKRIGLDQAYGSLTVKIIDPVKDYVELLEEIFDFDAI----RKAGLRLGFDPLGGVTGPYWKAIAEK 226 (524)
T ss_pred HHHHHHHHhhhcCccccchhhhcCcceeeeecchHHHHHHHHHhhcHHHH----HHHHhhcccccccCccchhHHHHHHH
Confidence 54211111111111 111112233467779999999999999987664 45677899999999999999999977
Q ss_pred cCCc--cccccccccCCCCCCCCCCCCcHHH---HHHHHHHHHh-cCCcEEEeeCCCCceeEEEcCCCccccchhHHHHH
Q 012505 158 LGAK--TSGSQFLEPDGMFPNHIPNPEDKTA---MKAIIQAVLD-NKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALM 231 (462)
Q Consensus 158 lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~---l~~l~~~v~~-~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll 231 (462)
-... .+ ..|+.|-+.|.+++|+|..... -..+..+++. ...|+|.+.|+||||-+++.+...+++|++.++++
T Consensus 227 ~~~~~t~v-~~~~~p~~~F~~l~~D~ni~~~~ss~~~ma~l~~~~d~~d~~aanD~DgDR~~Iv~~~~~~~nPn~~lAv~ 305 (524)
T COG0033 227 YLLNLTGV-NQNVDPTPDFMGLDPDGNIRMDCSSPCAMAGLLRLRDKYDFAAANDGDGDRHGIVTPGAGLMNPNHSLAVA 305 (524)
T ss_pred hcCCchhh-ccCcccCccccCCCCCCCEeEecCcHHHHHHhhccccccccccccCCCcccceeecCCCcccCchHHHHHH
Confidence 5443 33 4678999999998888875321 1234444443 78999999999999999999877899999999999
Q ss_pred HHHHHHhCCC---C-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcc
Q 012505 232 SAIVLEEHPG---T-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHW 307 (462)
Q Consensus 232 ~~~~l~~~~~---~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~ 307 (462)
++|+....+. . .|-.+.+|| .++|++++++|.+++++||||||+.+.+.... +-||||||-+ ..|..
T Consensus 306 ~~y~~~~~~~~~g~~~v~ktl~sS-~~iDRV~~~lGr~lyEvPvG~K~F~~~l~~g~-----~~~~GEESaG---a~~lR 376 (524)
T COG0033 306 IEYLFLHRPYWGGIVAVGKTLVSS-AAIDRVVAKLGRGLYEVPVGFKWFVDGLDAGS-----FGFGGEESAG---ASFLR 376 (524)
T ss_pred HHHHHhCCCccccceeeeeccccH-HHHHHHHHHhCCceEEcCCcceeeeccccccc-----eeeccccccc---cccee
Confidence 9998775442 1 244444555 47888999999999999999999998876543 4599999933 24555
Q ss_pred cCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcC-
Q 012505 308 LDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDS- 386 (462)
Q Consensus 308 ~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~- 386 (462)
.+||.++..+-+-+|+....+...+-++.-++..+++-+.|..+. .-.+. ++. ..+++.+|+....+
T Consensus 377 ek~g~Wa~~~~~~Ilall~aei~a~t~~~~~~~y~~~~r~~~~~~-Yervd--a~a---------a~~~~a~L~~ls~~~ 444 (524)
T COG0033 377 EKGGVWATDKDGNILALLAAEITAVTGKIPQEHYAELGRNFGRPD-YERVD--AEA---------ANAQKARLRKLSPEM 444 (524)
T ss_pred cCCCceeeechhHHHHHHhhhchhhhccCHHHHHHHHHHHhCccc-HHHhc--Cch---------hHHHHHHHHhhCccc
Confidence 677777664433333332211000000234555555544322110 00111 322 22334444433211
Q ss_pred -----CCC---------CCCCCccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHHHHHHHhhc
Q 012505 387 -----DPK---------LQKAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 387 -----~~~---------~~~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~~~~~~i~~ 446 (462)
..+ .+.....+.| |||.+++||+..||||||..+|||+|+ .+.+...+.....++.|.+
T Consensus 445 v~~t~l~g~~~~a~~~~~~Gn~s~~~G-LkV~~~ng~fa~R~SGT~~t~kiY~Esf~~~~h~~~~q~~~~~iV~~ 518 (524)
T COG0033 445 VSATTLAGDPITAYLTPAPGNGAAIGG-LKVTTENGWFAARPSGTEATYKIYAESFEGDEHLKQIQKEAAEIVSE 518 (524)
T ss_pred CCccccCCCcchhcccCCCCchhhcCc-eEEEeeCcEEEEecCCcchhhhhhhhhhCChHHHHHHHHHHHHHHHH
Confidence 111 1122334567 999999999999999999999999999 4444555555555555543
No 38
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-42 Score=325.45 Aligned_cols=428 Identities=21% Similarity=0.237 Sum_probs=309.3
Q ss_pred HHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCC---eeeEEcCCCCCCCHHHHH
Q 012505 4 DAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRN---GLKFFTNAGGLGKPDIKD 77 (462)
Q Consensus 4 ~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~n---GiK~~~~~G~~~~~~~~~ 77 (462)
+-+++.-+++|+.-+.+ |..+||+++.-++++ .++.|||+.||||||-... ||||.-++|++.++.+++
T Consensus 72 ~~I~~iaAaNGv~rlivGqnGiLSTPAvS~iIRk~-----~ka~GGiILTASHnPGGP~~DfGIKfN~~NGgPAPesvTd 146 (558)
T KOG0625|consen 72 QIIAKIAAANGVGRLIVGQNGILSTPAVSCIIRKY-----IKAGGGIILTASHNPGGPEGDFGIKFNLENGGPAPESVTD 146 (558)
T ss_pred HHHHHHHhhcCcceEEeccCCcccchHHHHHHHhh-----cccCceEEEEeccCCCCCCCccceEEecCCCCCChHHHHH
Confidence 45677778999997766 799999999999853 2678999999999997666 999999999999988776
Q ss_pred HHHHHHHHhhhh-----hhccccccc---ccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCC-CCCcEEEEeCCCCCch
Q 012505 78 ILERAADIYKQF-----MVEGLTNLE---KQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKP-LEGFHIVVDAGNGAGG 148 (462)
Q Consensus 78 ~ie~~~~~~~~~-----~~~~~~~~~---~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~-~~~~kvvvd~~~G~~~ 148 (462)
.|=.+.+...++ .+.|+.... .-.+-.+..+|..++|++.+.+.++...++.... .+++++.+|+|||+++
T Consensus 147 kIy~itk~i~eyki~~~~~iDls~vG~~~~~gpf~VeviDpv~~Yv~lmk~IFDF~~ik~lls~~~~~k~~~DamhGvtG 226 (558)
T KOG0625|consen 147 KIYEITKTISEYKIAKDPKIDLSTVGKTSFDGPFTVEVIDPVKDYVNLMKEIFDFDLIKSLLSGPKKLKFRFDAMHGVTG 226 (558)
T ss_pred HHHHhhhhhhhceeecCcccchhhhccccccCCeeEEEeccHHHHHHHHHHHhCHHHHHHHhcCCCCceEEEeecccccc
Confidence 553332222211 111221100 1112234566899999999998887655533222 2789999999999999
Q ss_pred HHHHHHH-hhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhH
Q 012505 149 FFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRL 227 (462)
Q Consensus 149 ~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~ 227 (462)
.....|| ++||+.....+||.|-|+|++.+|+|.-..+ ..|.+.+...+.|+|.|+||||||-++.-.+|.+++|..-
T Consensus 227 pY~~~IfvdelGa~~~~~~n~~Pl~DFGG~HPDPNLTYA-k~LV~rv~~~~~~fGAA~DGDGDRNMIlG~~~fFVtPsDS 305 (558)
T KOG0625|consen 227 PYVKAIFVDELGAPASSLQNCVPLEDFGGGHPDPNLTYA-KDLVDRVDRGEIDFGAAFDGDGDRNMILGKNGFFVTPSDS 305 (558)
T ss_pred hhhhHHHHhhhCCChHHhccCeeccccCCCCCCCchhhH-HHHHHHhccCCCcccccccCCCcceeeeccCceeeccchh
Confidence 9999886 8899986546899999999999999987765 4566668888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC----CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEec
Q 012505 228 IALMSAIVLEEH----PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALK 303 (462)
Q Consensus 228 ~~Ll~~~~l~~~----~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~ 303 (462)
.|++|.++..-- .+-.-++..+-++..+|++|++.|.+++++|||+|++.+.|..... -++|||| .+.-.
T Consensus 306 vAiIA~na~~IPYF~~~Gv~GfARSmPTs~AlDrVak~~gl~~yEvPTGWKfF~nLmDAgkl-----siCGEES-FGTGS 379 (558)
T KOG0625|consen 306 VAIIAANAEAIPYFRKQGVKGFARSMPTSGALDRVAKKLGLPVYEVPTGWKFFGNLMDAGKL-----SICGEES-FGTGS 379 (558)
T ss_pred HHHHHhcchhcchhhhcCcchhhhcCCchhHHHHHHHHcCCceEEcCchHHHHHhhhcccce-----eeccccc-ccCCc
Confidence 999999864310 1212223444455578899999999999999999999999865443 3789999 22234
Q ss_pred CCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcc-cceeeeeecccCccccCCcccchhHHHHHHHHh
Q 012505 304 ENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSDLKGGSFRDYGEAVLKHLEN 382 (462)
Q Consensus 304 ~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~ 382 (462)
++...+||+++.+..|..|+. ++. + .+.+++.+.+..|. ....|..+.. |.. +...++|+.|++
T Consensus 380 dHIREKDGiWAvlaWlsIlA~-~k~---~---~vedI~~~~W~~YGR~fftRYDYE~-~e~-------e~ank~m~~l~a 444 (558)
T KOG0625|consen 380 DHIREKDGIWAVLAWLSILAH-NKQ---N---VVEDIVKEHWAKYGRNFFTRYDYEE-VEA-------EGANKMMEDLEA 444 (558)
T ss_pred cccccccchhhHHHHHHHHHh-ccc---c---cHHHHHHHHHHHhCccceeecchhh-cCh-------HhHHHHHHHHHH
Confidence 678889999999999999987 321 1 28999999886542 2223444442 322 223578888876
Q ss_pred hhcC-CC------C-----------------CCCCCccccceEEEEe-cCeEEEEeecCCCc---eeEEEEeeCCHHHHH
Q 012505 383 RVDS-DP------K-----------------LQKAPVNYEGQVRVSG-SGGWFLLRLSLHDP---VLPLNIEAPSREDAV 434 (462)
Q Consensus 383 ~~~~-~~------~-----------------~~~~~~~~dG~iki~~-~~~wvliRpSgTEP---~irvy~Ea~~~~~a~ 434 (462)
.... .. + ....+....| ||+.+ |++++.+|-|||.. .+|+|+|+..++. .
T Consensus 445 ~~~~~~vg~~~~~~~~~y~V~~ad~F~Y~DPvDGSvs~~QG-lri~F~dGsR~VfRLSGTGSsGATiRLYie~ye~d~-s 522 (558)
T KOG0625|consen 445 LVSDSFVGKSFSPGDEVYKVAKADDFEYTDPVDGSVSKKQG-LRIVFEDGSRIVFRLSGTGSSGATIRLYIESYEKDV-S 522 (558)
T ss_pred HhccccccccccCCCceEEEEecCCceecCCCCCcccccCc-eEEEEcCCcEEEEEeccCCCCCceEEEehhhhccch-h
Confidence 5421 10 0 1112333467 99985 56799999999986 6999999966544 3
Q ss_pred HHHHHHHHHhhcCCC--CChhhHHHHHh
Q 012505 435 KLGLAVAAATKEFPA--LDTSALDKFVQ 460 (462)
Q Consensus 435 ~l~~~~~~~i~~~~~--~~~~~~~~~~~ 460 (462)
+.....+..++.+++ |++|+|.+|+-
T Consensus 523 ~~~~~aq~~LkPli~~alk~~~~~e~tG 550 (558)
T KOG0625|consen 523 KIDQDAQVALKPLIDIALKISKLKEFTG 550 (558)
T ss_pred hhCcCHHHHHHHHHHHHHHHHhHHHhhC
Confidence 444455555666555 68999999873
No 39
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.3e-25 Score=219.41 Aligned_cols=291 Identities=22% Similarity=0.239 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHhhcCCC-CCCCCCcEEEEeCCCCCchHHHHHHHhhcC--CccccccccccCCCCCCCCCCCCcHHHH
Q 012505 111 MSVYTSDLVKAVRRAAGDI-EKPLEGFHIVVDAGNGAGGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPEDKTAM 187 (462)
Q Consensus 111 ~~~Y~~~l~~~~~~~~~~~-~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~~~~~l 187 (462)
.+.|++.+.+.+....... .......|+.|||.||+|..-+..+..-.. ..+. .+|...||..-|..|.
T Consensus 186 ~~~Y~~~ls~af~~l~~~~~~~~~~~~k~~VD~ANGvG~~klk~l~~i~~~~l~vE-ivNd~~dpelLN~~CG------- 257 (539)
T KOG2537|consen 186 EEGYYSKLSKAFNELRNITQESGDEVSKLIVDCANGVGAPKLKELLGIDSGLLNVE-VVNDGIDPGLLNNGCG------- 257 (539)
T ss_pred cccHHHHHHHHHHHhhhhccccCCccceEEEECccccchHHHHHHhccCCCcCceE-EEcCCCChhhhccccc-------
Confidence 4678888887775433211 112245699999999999988887765221 1122 3444444333222221
Q ss_pred HHHHHHHHh----------cCC-cEEEeeCCCCceeEEE--cCCC--ccccchhHHHHHHHHHHHh---CC---CCeEEE
Q 012505 188 KAIIQAVLD----------NKA-DLGIIFDTDVDRSAAV--DSTG--HELNRNRLIALMSAIVLEE---HP---GTTIVT 246 (462)
Q Consensus 188 ~~l~~~v~~----------~~a-dlgia~D~DgDR~~~v--d~~G--~~l~~d~~~~Ll~~~~l~~---~~---~~~vv~ 246 (462)
.+.|+. ..+ -.+..||||+||+..+ ++++ ++++||.+..+++.|+-+. .. ..++|.
T Consensus 258 ---ADFVkt~QkpP~~~~~~~~~~~caSfDGDADRlvyf~~~~~~~f~llDGDkistlla~~l~~ll~~~~~~l~~GvVq 334 (539)
T KOG2537|consen 258 ---ADFVKTKQKPPKGLSPIKANTRCASFDGDADRLVYFYIDDDSEFHLLDGDKIATLIAGYLRELLKQIELSLRLGVVQ 334 (539)
T ss_pred ---cchhhccccCCCCCCCCCCCCceeeeecccceeEEEEecCCceeEeecchHHHHHHHHHHHHHHHHhhccceeeeEE
Confidence 112221 111 3688999999999876 5555 8999999999999987543 21 235777
Q ss_pred eccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceE--ecCCcc-------cCcHH--HHH
Q 012505 247 DSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA--LKENHW-------LDDGA--YLM 315 (462)
Q Consensus 247 ~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~--~~~~~~-------~~Dgi--~aa 315 (462)
+..+.....+++-+..++.++.+++|.|++.+++.+.+. .+.||.+||+. |.+... ..+.. ..+
T Consensus 335 taYaNgast~yl~~~l~~~vv~v~tGvKhlh~~A~efDi-----GiyFEaNGHGti~FS~~~~~~i~~~~~~~~~~~~~a 409 (539)
T KOG2537|consen 335 TAYANGASTDYLKETLKFPVVCVPTGVKHLHHAAAEFDI-----GIYFEANGHGTILFSEAFLATIKDLAETKEPGESKA 409 (539)
T ss_pred EEeecCccHhhhhhhcCCceEEeccccchHHHHHHhhcc-----eeEEeccCccceeehHHHHHhhhhhhhCCCccchHH
Confidence 888888888999887999999999999999999987653 47899999976 433210 11111 122
Q ss_pred HHHHHHHHHHHHcCCCCCcccHHHHH--------------------hhccCCcccceeeeeecccCccccCCcccchhHH
Q 012505 316 VKLLNKLASARAAGRGGGSKVLTDLV--------------------DGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEA 375 (462)
Q Consensus 316 ~~ll~~l~~~~~~~~~~~~~~Ls~ll--------------------~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 375 (462)
+.+|..++.-- ++... ..+++++ ..+|.. .+++.+. + + .
T Consensus 410 ~~~L~~~~~Li-nq~vG--DAisd~llv~~il~~~~~s~~~w~e~y~dlPnr----q~Kv~v~----D------r----~ 468 (539)
T KOG2537|consen 410 LKTLKLLSDLI-NQTVG--DAISDMLAVEAILAHKGWSVQDWDELYRDLPNR----QLKVKVP----D------R----S 468 (539)
T ss_pred HHHHHHHHhhh-cccch--hhhcchHHHHHHHHhcCCCHHHHHHHhcCCccc----eEEEEec----c------c----e
Confidence 33333332211 11010 1233322 222211 1111111 0 0 0
Q ss_pred HHHHHHhhhcCCCCCCCCCccccceEEE-------EecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 376 VLKHLENRVDSDPKLQKAPVNYEGQVRV-------SGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 376 v~~~l~~~~~~~~~~~~~~~~~dG~iki-------~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
++..- + .+. ...+-+| |+. .+..|+.++||||||.++|||+|+.+++.+++|+..+.+.|..+
T Consensus 469 i~~tt-d-aer------~~v~P~g-lQ~~Ida~vaky~~gRaFvR~SGTEdvVRVYAEa~t~~~~d~l~~~v~~~v~~~ 538 (539)
T KOG2537|consen 469 IIKTT-D-AER------QLVKPVG-LQDKIDALVAKYKRGRSFVRPSGTEDVVRVYAEASTKEDADQLALEVAQLVLKL 538 (539)
T ss_pred eeech-h-hhh------hcCCcHH-HHHHHHHHHhhccCCceEEeccCccceEEEEEecCchhhHHHHHHHHHHHHHhh
Confidence 00000 0 000 0111122 221 14569999999999999999999999999999999999988764
No 40
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=99.87 E-value=1.8e-22 Score=166.68 Aligned_cols=102 Identities=40% Similarity=0.644 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHH-hhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCC-CCCCCCcHHHHHH
Q 012505 112 SVYTSDLVKAVR-RAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKA 189 (462)
Q Consensus 112 ~~Y~~~l~~~~~-~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~ 189 (462)
+.|++.+.+.++ ... ++.+++||+|||+||+++.+++.+|++|||+++ .+|+.+|+.|++ +.|+|+. ++++.
T Consensus 1 e~Y~~~l~~~~~~~~~----~~~~~~kivvD~~~G~~~~~~~~ll~~lg~~~~-~~n~~~d~~f~~~~~p~p~~-~~l~~ 74 (104)
T PF02879_consen 1 EAYIESLLSFIDILEA----IKKSGLKIVVDCMNGAGSDILPRLLERLGCDVI-ELNCDPDPDFPNQHAPNPEE-ESLQR 74 (104)
T ss_dssp HHHHHHHHHTSCHHHH----HHHTTCEEEEE-TTSTTHHHHHHHHHHTTCEEE-EESSS-STTGTTTSTSSTST-TTTHH
T ss_pred ChHHHHHhhhccchhh----cccCCCEEEEECCCCHHHHHHHHHHHHcCCcEE-EEeccccccccccccccccc-chhHH
Confidence 478999888876 322 234689999999999999999999999999998 599999999999 8999997 88999
Q ss_pred HHHHHHhcCCcEEEeeCCCCceeEEEcCCC
Q 012505 190 IIQAVLDNKADLGIIFDTDVDRSAAVDSTG 219 (462)
Q Consensus 190 l~~~v~~~~adlgia~D~DgDR~~~vd~~G 219 (462)
+.+.+++.++|+|+++||||||++++|++|
T Consensus 75 ~~~~v~~~~ad~g~~~DgDaDRl~~vd~~G 104 (104)
T PF02879_consen 75 LIKIVRESGADLGIAFDGDADRLGVVDENG 104 (104)
T ss_dssp HHHHHHHSTTSEEEEE-TTSSBEEEEETTS
T ss_pred HHHHhhccCceEEEEECCcCceeEEECCCC
Confidence 999999999999999999999999999987
No 41
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain III found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B 3UW2_A 2F7L_B 3I3W_B 2Z0F_A ....
Probab=99.86 E-value=1.1e-21 Score=164.22 Aligned_cols=111 Identities=34% Similarity=0.448 Sum_probs=93.9
Q ss_pred cchhHHHHHHHHHHHhCCCC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceE
Q 012505 223 NRNRLIALMSAIVLEEHPGT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA 301 (462)
Q Consensus 223 ~~d~~~~Ll~~~~l~~~~~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~ 301 (462)
+||++++|+++++++.+++. .||.+.+||. +++.+++++|+++++|||||+||.++|.+.++ +||||+|||++
T Consensus 1 ~gd~~~al~a~~~l~~~~~~~~vv~~v~sS~-~~~~~~~~~g~~~~~t~vG~~~i~~~~~~~~~-----~~ggE~sgg~~ 74 (113)
T PF02880_consen 1 NGDELLALLADYLLEEHKPGGTVVVTVVSSR-ALDKIAEKHGGKVIRTKVGFKNIAEKMREENA-----VFGGEESGGFI 74 (113)
T ss_dssp HHHHHHHHHHHHHHHCHTTTEEEEEETTS-T-HHHHHHHHTTSEEEEESSSHHHHHHHHHHTTE-----SEEEETTSEEE
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEEeCHHHH-HHHHHHHHCCCEEEEecCCcHHHHHHHhhhce-----eEEecccCeEE
Confidence 58999999999999864433 5887666666 66678889999999999999999999999874 69999999999
Q ss_pred ecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCC
Q 012505 302 LKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEP 347 (462)
Q Consensus 302 ~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~ 347 (462)
|+++++.+||++++++++++|+..+ ++|+++++++|++
T Consensus 75 ~~~~~~~~Dgi~a~~~~l~~l~~~~--------~~ls~ll~~l~~~ 112 (113)
T PF02880_consen 75 FPDFSYDKDGIYAALLLLELLAEEG--------KTLSELLDELPKK 112 (113)
T ss_dssp ETTTESSE-HHHHHHHHHHHHHHHT--------S-HHHHHHHHHHH
T ss_pred ecCCCCCCcHHHHHHHHHHHHHHhC--------CCHHHHHHHHhcc
Confidence 9999999999999999999998653 4699999999974
No 42
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain I found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 3I3W_B 1WQA_C 1KFQ_B 1KFI_A 2Z0F_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.78 E-value=1.5e-19 Score=156.74 Aligned_cols=77 Identities=40% Similarity=0.618 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
+|+++++++|+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.|+
T Consensus 55 ~~~~~~~~~l~~~G~~V~~~g~~~tP~~~~~~~------~~~~~ggi~iTaShnp~~~ngik~~~~~G~~~~~~~~~~I~ 128 (137)
T PF02878_consen 55 MLAKALAAGLRANGVDVIDIGLVPTPALSFAIR------QLNADGGIMITASHNPPGYNGIKFFDANGGPISPEEERKIE 128 (137)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEB-HHHHHHHHH------HHTESEEEEE--TTS-TTEEEEEEEETTSSB--HHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccccccCcHHhhhhcc------ccccceeeEEEecCCCCCcceEEEEeCCCCcCCHHHHHHHH
Confidence 489999999999999999999999999999998 56789999999999999999999999999999888777777
Q ss_pred HHH
Q 012505 81 RAA 83 (462)
Q Consensus 81 ~~~ 83 (462)
+..
T Consensus 129 ~~~ 131 (137)
T PF02878_consen 129 QII 131 (137)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 43
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.42 E-value=4.6e-13 Score=102.74 Aligned_cols=49 Identities=29% Similarity=0.533 Sum_probs=44.3
Q ss_pred cccceEEEEecCeEEE-EeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012505 396 NYEGQVRVSGSGGWFL-LRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 445 (462)
Q Consensus 396 ~~dG~iki~~~~~wvl-iRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~ 445 (462)
..|| +++.++|||++ ||||||||++|||+||.|.+.++++.+.+.+.|+
T Consensus 24 ~~~~-~~~~~~dG~~l~vR~SgTEP~iRv~~Ea~~~~~~~~~~~~i~~~ik 73 (73)
T PF00408_consen 24 TIDG-IKILFEDGWRLLVRPSGTEPKIRVYVEAPDEEELEEIAEEIAEAIK 73 (73)
T ss_dssp HHHC-EEEEETTEEEEEEEEESSSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccce-EEEECCCceEEEEECCCCCceEEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 3578 99998888777 9999999999999999999999999999998875
No 44
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=96.77 E-value=0.001 Score=70.12 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcc
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLT 34 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~ 34 (462)
||++++++||.++|++|+++|.+|||+++|++..
T Consensus 117 ~l~~a~~~gl~~~G~~V~d~g~~~TP~~~~~v~~ 150 (513)
T cd03086 117 ALLQALLDGLKALGGNVIDYGLVTTPQLHYLVRA 150 (513)
T ss_pred HHHHHHHHHHHHCCCeEEEccCcCcHHHHHHHHh
Confidence 6899999999999999999999999999999973
No 45
>PLN02895 phosphoacetylglucosamine mutase
Probab=95.05 E-value=0.021 Score=60.52 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCChhhhhhhhccc
Q 012505 2 LQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTE 35 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~ 35 (462)
|.+++++||.+.|++|+++|.+|||+++|++...
T Consensus 143 l~~a~~~gl~~~G~~v~d~G~~tTP~l~~~v~~~ 176 (562)
T PLN02895 143 LLAAALKGVRAIGARAVDMGILTTPQLHWMVRAA 176 (562)
T ss_pred HHHHHHHHHHHCCCCEEEeCcCCcHHHHHHHHhc
Confidence 7899999999999999999999999999999743
No 46
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=94.87 E-value=0.021 Score=60.87 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.9
Q ss_pred CHHHHHHHHHH-hCCCcEEEeCCCChhhhhhhhcc
Q 012505 1 MLQDAVSRGIT-GAGLDVVQYGLASTPAMFNSTLT 34 (462)
Q Consensus 1 ~l~~a~a~gL~-s~Gi~V~~~g~~ptP~~~~a~~~ 34 (462)
+|++|+++||+ +.|++|+++|.+|||+++|+++.
T Consensus 167 ~L~~al~~gl~~~~G~~v~d~G~~tTP~l~y~v~~ 201 (585)
T PTZ00302 167 ELVSALLRGLKLLIGSNVRNFGIVTTPQLHFLVAF 201 (585)
T ss_pred HHHHHHHHHHHHhcCCcEEEeCCCCcHHHHHHHHH
Confidence 47899999999 99999999999999999999974
No 47
>PF11576 DUF3236: Protein of unknown function (DUF3236); InterPro: IPR012019 This family of proteins with unknown function appears to be restricted to Methanobacteria. ; PDB: 3BRC_B.
Probab=69.82 E-value=15 Score=31.38 Aligned_cols=82 Identities=21% Similarity=0.167 Sum_probs=44.7
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEe-----eCCCCce
Q 012505 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII-----FDTDVDR 211 (462)
Q Consensus 137 kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia-----~D~DgDR 211 (462)
+|||-..|+-=-.++..++.+++..-..-+ + +|+..++-+..-++....-.+.-.+||+.|+ .=|.|.=
T Consensus 37 kIvV~t~N~kKf~vi~~il~~~~~~~i~~l--~----i~Tn~aDlTrmPA~~K~LmavD~~dADlvIARGRLGvPGSGSm 110 (154)
T PF11576_consen 37 KIVVATNNEKKFKVINDILSKFNLPEIEML--D----IPTNSADLTRMPALSKALMAVDISDADLVIARGRLGVPGSGSM 110 (154)
T ss_dssp -EEE----HHHHHHHHHHHHHTT----EE--------S--GGGGGSSSHHHHHHHHHHHHH--SEEEEEEE-SSTTS-EE
T ss_pred eEEEecCCchHhHHHHHHHHHhcCCcccee--e----ccCcchhcccCcHHHhHHHheeccCCcEEEEcccccCCCCccE
Confidence 788888888888899999999986433112 1 2222222222233455555677889999987 4577777
Q ss_pred eEEEcCCCccccc
Q 012505 212 SAAVDSTGHELNR 224 (462)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (462)
+.+.|.+|+++++
T Consensus 111 lvimD~kGRiLta 123 (154)
T PF11576_consen 111 LVIMDSKGRILTA 123 (154)
T ss_dssp EEEEETTS-EEEE
T ss_pred EEEEcCCCcEEee
Confidence 7778999998875
No 48
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=65.24 E-value=94 Score=27.09 Aligned_cols=74 Identities=16% Similarity=0.021 Sum_probs=45.1
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++.+-|.. -...+...|++.|++|.. +... +..-+ ... |..-..+.+.|.+..+|.||.+.|.|--+.+
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~~-~~~~~--~dY---pd~a~~va~~V~~~~~~~GIliCGtGiG~si 74 (148)
T TIGR02133 2 RVVLGHDHAGFEYKEALWLDLAAHEPEVCD-VGVY-DADDD--DDY---PCFCIAAAEAVARDAADLGIVIGGSGNGEAI 74 (148)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCCCEEEE-CCCC-CCCCC--CCc---hHHHHHHHHHHhcCCCceEEEEcCCChhhee
Confidence 6777777753 234666778889998862 2210 00000 111 2333577888888889999999888865555
Q ss_pred EcC
Q 012505 215 VDS 217 (462)
Q Consensus 215 vd~ 217 (462)
.-+
T Consensus 75 aAN 77 (148)
T TIGR02133 75 AAN 77 (148)
T ss_pred eec
Confidence 443
No 49
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=60.11 E-value=32 Score=29.69 Aligned_cols=63 Identities=17% Similarity=0.161 Sum_probs=38.9
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
||++-+-|+- -...+.+.|+..|++|+. +... + +... |..-..+.+.|.+..+|.||.+.|.|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~G~~-~---~~dY-----pd~a~~va~~V~~~~~~~GIliCGTG 66 (142)
T PRK08621 2 AIIIGADKAGFELKEVVKDYLEDNKYEVVD-VTEE-G---AEDF-----VDSTLAVAKEVNKSEDNLGIVIDAYG 66 (142)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-CCCC-C---CCCc-----HHHHHHHHHHHHcCCCceEEEEcCCC
Confidence 5777776653 344667788899998873 3221 1 1111 22335677778777777777777666
No 50
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=58.44 E-value=40 Score=29.10 Aligned_cols=63 Identities=16% Similarity=0.129 Sum_probs=39.6
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
||++-+-|+. -...+.+.|++.|++|+. +.. .+ +... +..-..+.+.|.+..+|.||.++|-|
T Consensus 2 kI~IgsDh~G~~lK~~i~~~L~~~G~eV~D-~G~-~~---~~dY-----pd~a~~va~~V~~~e~~~GIliCGtG 66 (141)
T TIGR01118 2 AIIIGSDLAGKRLKDVIKNFLVDNGFEVID-VTE-GD---GQDF-----VDVTLAVASEVQKDEQNLGIVIDAYG 66 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cCC-CC---CCCc-----HHHHHHHHHHHHcCCCceEEEEcCCC
Confidence 6777777753 234566778889998873 322 11 1112 23345677888888888888887766
No 51
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=55.08 E-value=56 Score=29.18 Aligned_cols=102 Identities=14% Similarity=0.041 Sum_probs=56.4
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|.. -...+.+.|++.|++|+. +.... .=+... |..-..+.+.|.+..+|.||.+.+.|=
T Consensus 2 kI~IgsDhaG~~lK~~l~~~L~~~G~eV~D-~G~~~--~e~~dY-----pd~a~~va~~V~~g~~d~GIliCGTGi---- 69 (171)
T PRK08622 2 KIAIGCDHIVTDEKMAVSDYLKSKGHEVID-VGTYD--FTRTHY-----PIFGKKVGEAVASGEADLGVCICGTGV---- 69 (171)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cCCCC--CCCCCh-----HHHHHHHHHHHHcCCCcEEEEEcCCcH----
Confidence 6777776654 344666778888998862 22211 001111 233356677777766666666665541
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
+.-++. - +-+.|.+..+++........+.+++.|+.
T Consensus 70 -------------G~siaA---N--Kv~GIRAA~~~d~~sA~~aR~hNnaNVL~ 105 (171)
T PRK08622 70 -------------GISNAV---N--KVPGIRSALVRDMTSALYAKEELNANVIG 105 (171)
T ss_pred -------------HHHHHH---h--cCCCeEEEEeCCHHHHHHHHHhcCCcEEE
Confidence 111111 1 23347776777766666665666776664
No 52
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=54.41 E-value=57 Score=29.12 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=56.2
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|+. -...+.+.|++.|++|+. +. ++..=+... |..-..+.+.|.+..+|+||.+.+.|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~G--~~~~~~~dY-----pd~a~~va~~V~~g~~d~GIliCGTGi---- 69 (171)
T PRK12615 2 KIAIGCDHIVTNEKMAVSDFLKSKGYDVID-CG--TYDHTRTHY-----PIFGKKVGEAVVNGQADLGVCICGTGV---- 69 (171)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCCCEEEE-cC--CCCCCCCCh-----HHHHHHHHHHHHcCCCCEEEEEcCCcH----
Confidence 6777777653 234566778889998862 22 111101111 233356677777777777777665541
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
| .-++. ++-+.|.+..+++........+.++..|+.
T Consensus 70 ----G---------~siaA-----NK~~GIRAA~~~d~~~A~~ar~hNnaNVL~ 105 (171)
T PRK12615 70 ----G---------INNAV-----NKVPGIRSALVRDMTTALYAKEELNANVIG 105 (171)
T ss_pred ----H---------HHHHH-----hcCCCeEEEEeCCHHHHHHHHHhcCCcEEE
Confidence 1 11111 123347776766766666555666666664
No 53
>PF09981 DUF2218: Uncharacterized protein conserved in bacteria (DUF2218); InterPro: IPR014543 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2JPI_A.
Probab=53.91 E-value=1.1e+02 Score=24.12 Aligned_cols=70 Identities=24% Similarity=0.194 Sum_probs=46.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCccccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 373 GEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 373 ~~~v~~~l~~~~~~~~~~~~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
..+.+++|-+.+... ..+..-+..-+|.++.|-..+++ +.-.+.+.+||.|.+...++..-+.+.+..+-
T Consensus 10 ~~ryl~qLc~Hf~hk----~~v~~d~~~g~i~f~~G~~~l~a--~~~~L~l~vea~~~~~L~~~~~vv~~HL~rFa 79 (89)
T PF09981_consen 10 ASRYLKQLCKHFAHK----FEVEWDEDSGRITFPFGTCTLSA--EPDALTLRVEAPDAEALARLEDVVARHLERFA 79 (89)
T ss_dssp HHHHHHHHHHHTTTS----SEEEE-SSEEEEE-SSS-EEEEE--ETTEEEEEEEESSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCC----CceEEcCCceEEEeCCEEEEEEe--CCCeEEEEEEeCCHHHHHHHHHHHHHHHHHHh
Confidence 357788887766432 22222222267777778777777 45578899999999999998888888776653
No 54
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=53.33 E-value=62 Score=28.18 Aligned_cols=103 Identities=14% Similarity=0.046 Sum_probs=54.5
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|.- -...+.+.|++.|++|+. +-..... -+... |..-..+.+.|.+..+|.||.+.|.|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~~~~~-~~~dY-----pd~a~~va~~V~~g~~~~GIliCGtGi---- 70 (148)
T PRK05571 2 KIAIGSDHAGFELKEEIIEHLEELGHEVID-LGPDSYD-ASVDY-----PDYAKKVAEAVVAGEADRGILICGTGI---- 70 (148)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCCCEEEE-cCCCCCC-CCCCH-----HHHHHHHHHHHHcCCCCEEEEEcCCcH----
Confidence 5677666653 234566778889998862 2211100 01111 333456777777766777776665541
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
| .-++ .- +-+.|.+..+++........+.++..|+.
T Consensus 71 ----G---------~sia---AN--K~~GIRAA~~~d~~~A~~ar~hNnaNVL~ 106 (148)
T PRK05571 71 ----G---------MSIA---AN--KVKGIRAALCHDTYSAHLAREHNNANVLA 106 (148)
T ss_pred ----H---------HHHH---Hh--cCCCeEEEEECCHHHHHHHHHhcCCcEEE
Confidence 1 1111 11 22346666666665555555555665554
No 55
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=51.42 E-value=59 Score=28.15 Aligned_cols=101 Identities=13% Similarity=-0.010 Sum_probs=52.3
Q ss_pred EEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEE
Q 012505 138 IVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAV 215 (462)
Q Consensus 138 vvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~v 215 (462)
|++-+-|+. -...+.+.|++.|.+|+. +-+..+ =+... +..-..+.+.|.+..+|+||.++|-|=
T Consensus 2 I~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~~~~--~~~dY-----pd~a~~va~~V~~~~~~~GIliCGtGi----- 68 (143)
T TIGR01120 2 IAIGSDHAGFILKEEIKAFLVERGVKVID-KGTWSS--ERTDY-----PHYAKQVALAVAGGEVDGGILICGTGI----- 68 (143)
T ss_pred EEEEeCcchHHHHHHHHHHHHHCCCEEEE-eCCCCC--CCCCH-----HHHHHHHHHHHHCCCCceEEEEcCCcH-----
Confidence 555555542 233566778899998862 221110 01111 233346677777666666666665541
Q ss_pred cCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 216 DSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 216 d~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
| .-++. - +-+.|.+..+++........+.+++.++.
T Consensus 69 ---G---------~siaA---N--K~~GIraa~~~d~~~A~~ar~hNnaNvl~ 104 (143)
T TIGR01120 69 ---G---------MSIAA---N--KFAGIRAALCSEPYMAQMSRLHNDANVLC 104 (143)
T ss_pred ---H---------HHHHH---h--cCCCeEEEEECCHHHHHHHHHhcCCcEEE
Confidence 1 11111 1 23346666666665555555555665554
No 56
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=50.18 E-value=71 Score=28.53 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=56.2
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|+. -...+.+.|++.|++|+. +. ++..=+... +..-..+.+.|.+..+|+||.+.+-|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~G--~~~~~~~dY-----pd~a~~va~~V~~g~~~~GIliCGTGi---- 69 (171)
T TIGR01119 2 KIAIGCDHIVTDVKMEVSEFLKSKGYEVLD-VG--TYDFTRTHY-----PIFGKKVGEAVVSGEADLGVCICGTGV---- 69 (171)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCCCEEEE-eC--CCCCCCCCh-----HHHHHHHHHHHHcCCCCEEEEEcCCcH----
Confidence 5777666653 234566778888998862 22 111101111 233356677777776777777665541
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRF 269 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t 269 (462)
| .-++. ++-+.|.+..+++........+.+++.|+.-
T Consensus 70 ----G---------~siaA-----NKv~GIRAAl~~d~~sA~~ar~hNnaNVL~l 106 (171)
T TIGR01119 70 ----G---------INNAV-----NKVPGVRSALVRDMTSALYAKEELNANVIGF 106 (171)
T ss_pred ----H---------HHHHH-----hcCCCeEEEEeCCHHHHHHHHHhcCCcEEEE
Confidence 1 11111 1233466666666666665556666666653
No 57
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=49.96 E-value=62 Score=27.93 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=54.9
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|+. -...+.+.|++.|++|+. +.. ++ ... +..-..+.+.|.+..++.||.++|-|==+.+
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~--~~---~dy-----pd~a~~va~~V~~~e~~~GIliCGtGiG~si 70 (141)
T PRK12613 2 AIILGADAHGNALKELIKSFLQEEGYDIID-VTD--IN---SDF-----IDNTLAVAKAVNEAEGRLGIMVDAYGAGPFM 70 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cCC--CC---CCh-----HHHHHHHHHHHHcCCCceEEEEcCCCHhHhh
Confidence 5677666653 234566778889998873 322 11 112 2233567778877777777777766522221
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
.- ++-+.|.+..+++........++++..++.
T Consensus 71 aA----------------------NKv~GIRaA~~~d~~~A~~ar~hNnaNVl~ 102 (141)
T PRK12613 71 VA----------------------TKLKGMVAAEVSDERSAYMTRGHNNARMIT 102 (141)
T ss_pred hh----------------------hcCCCeEEEEECCHHHHHHHHHHcCCcEEE
Confidence 11 122336665666655555555555555544
No 58
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=48.76 E-value=86 Score=27.41 Aligned_cols=103 Identities=9% Similarity=-0.034 Sum_probs=56.4
Q ss_pred cEEEEeCCCCC--chHHHHHHHhh--cCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCce
Q 012505 136 FHIVVDAGNGA--GGFFAAKVLEP--LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDR 211 (462)
Q Consensus 136 ~kvvvd~~~G~--~~~~~~~ll~~--lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR 211 (462)
+||++-+-|+. -...+.+.|++ .|++|+. +- ++..-+... +..-..+.+.|.+..++.||.++|.|=
T Consensus 3 mkI~igsDhaG~~lK~~l~~~L~~~~~g~eV~D-~G--~~~~~~~dY-----p~~a~~va~~V~~~~~~~GIliCGtGi- 73 (151)
T PTZ00215 3 KKVAIGSDHAGFDLKNEIIDYIKNKGKEYKIED-MG--TYTAESVDY-----PDFAEKVCEEVLKGEADTGILVCGSGI- 73 (151)
T ss_pred cEEEEEeCCchHHHHHHHHHHHHhccCCCEEEE-cC--CCCCCCCCH-----HHHHHHHHHHHhcCCCcEEEEEcCCcH-
Confidence 47888777764 23356677888 9998862 22 211101111 233346677777766667766665541
Q ss_pred eEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 212 SAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 212 ~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
| .-++ .- +-+.|.+..+++........+.++..++.
T Consensus 74 -------G---------~sia---AN--K~~GIRAa~~~d~~~A~~ar~hNnaNVL~ 109 (151)
T PTZ00215 74 -------G---------ISIA---AN--KVKGIRCALCHDHYTARMSRQHNNANVLA 109 (151)
T ss_pred -------H---------HHHH---Hh--cCCCeEEEEECCHHHHHHHHHhcCCcEEE
Confidence 1 1111 11 22347776766766665555656665554
No 59
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=48.47 E-value=1.1e+02 Score=23.15 Aligned_cols=59 Identities=20% Similarity=0.261 Sum_probs=39.0
Q ss_pred CCcEEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCC
Q 012505 134 EGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDT 207 (462)
Q Consensus 134 ~~~kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~ 207 (462)
.++.+.++... -+.++..+++.+|++++. -.... .-..+|.++.+.++ .+.++++.-|+
T Consensus 10 ~~~~~lvS~s~--DGe~ia~~~~~~G~~~iR-GSs~r-----------gg~~Alr~~~~~lk-~G~~~~itpDG 68 (74)
T PF04028_consen 10 RKIAALVSRSR--DGELIARVLERFGFRTIR-GSSSR-----------GGARALREMLRALK-EGYSIAITPDG 68 (74)
T ss_pred CCEEEEEccCc--CHHHHHHHHHHcCCCeEE-eCCCC-----------cHHHHHHHHHHHHH-CCCeEEEeCCC
Confidence 45566666543 567999999999999873 11111 11467777888887 56788888553
No 60
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=47.80 E-value=26 Score=34.91 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=40.1
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 134 ~~~kvvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
.++.|++||.|+.+. ..++..--.+|++ ++ +.|.+||-..+. .|..-.++.|..+.+.++.
T Consensus 261 ~~lPVi~d~sH~~G~~~~v~~~a~AAvA~GAdGliI-E~H~~pd~alsD-~~~sl~p~e~~~lv~~i~~ 327 (335)
T PRK08673 261 THLPVIVDPSHATGKRDLVEPLALAAVAAGADGLIV-EVHPDPEKALSD-GPQSLTPEEFEELMKKLRA 327 (335)
T ss_pred cCCCEEEeCCCCCccccchHHHHHHHHHhCCCEEEE-EecCCcccCCCc-chhcCCHHHHHHHHHHHHH
Confidence 468999999999887 2455556678998 66 567777777643 3333444556666555543
No 61
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.45 E-value=45 Score=32.16 Aligned_cols=61 Identities=20% Similarity=0.272 Sum_probs=38.3
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 134 ~~~kvvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
.++.|++||.|+.+. ..++..--.+|++ ++ +.|..||-..+. .+..-+++.|..+.+.+++
T Consensus 195 ~~~pV~~D~sHs~G~~~~v~~~~~aAva~Ga~Gl~i-E~H~~pd~a~~D-~~~sl~p~~l~~l~~~i~~ 261 (266)
T PRK13398 195 SHLPIIVDPSHATGRRELVIPMAKAAIAAGADGLMI-EVHPEPEKALSD-ARQTLNFEEMKELVDELKP 261 (266)
T ss_pred cCCCEEEeCCCcccchhhHHHHHHHHHHcCCCEEEE-eccCCccccCCc-hhhcCCHHHHHHHHHHHHH
Confidence 468899999999984 3344445578998 66 467777776653 3333334445555555543
No 62
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.30 E-value=41 Score=33.80 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=38.3
Q ss_pred CCcEEEEeCCCCCc-hHHHHH---HHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 134 EGFHIVVDAGNGAG-GFFAAK---VLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 134 ~~~kvvvd~~~G~~-~~~~~~---ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
.++.|++|+.|+++ +..++. .--.+|++ ++ +.|.+||-... ..+..-.++.|..+.+.+++
T Consensus 270 ~~lPVi~DpsH~~G~sd~~~~~a~AAva~GAdGliI-E~H~~pd~Als-D~~qsl~p~~~~~l~~~i~~ 336 (352)
T PRK13396 270 THLPIMIDPSHGTGKSEYVPSMAMAAIAAGTDSLMI-EVHPNPAKALS-DGPQSLTPDRFDRLMQELAV 336 (352)
T ss_pred hCCCEEECCcccCCcHHHHHHHHHHHHhhCCCeEEE-EecCCcccCCC-hhhhcCCHHHHHHHHHHHHH
Confidence 46899999999887 333333 33457998 66 46777776665 33343445556666555554
No 63
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=46.25 E-value=89 Score=30.71 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=47.8
Q ss_pred HHHHHhcCCcEEEeeCCCCc---------eeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHH
Q 012505 191 IQAVLDNKADLGIIFDTDVD---------RSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKK 261 (462)
Q Consensus 191 ~~~v~~~~adlgia~D~DgD---------R~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~ 261 (462)
.+.+++.++|=++.+|+||+ -++++.++|.++++.. ...++ .-++-..+++ ++++
T Consensus 167 ~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l--------------~~~~L-~GItR~~vi~-l~~~ 230 (313)
T TIGR01123 167 QAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPL--------------SGSIL-PGITRDSLLQ-LAKD 230 (313)
T ss_pred HHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCC--------------CCCCC-cchHHHHHHH-HHHH
Confidence 45667789999999999987 4555655566666541 11122 1122233444 6677
Q ss_pred cCCeEEEEecchHHHHHH
Q 012505 262 LGGKHHRFKRGYKNVIDE 279 (462)
Q Consensus 262 ~g~~v~~t~~G~k~i~~~ 279 (462)
.|.++.+.+.....+.+.
T Consensus 231 ~Gi~v~e~~i~~~~l~~A 248 (313)
T TIGR01123 231 LGMEVEERRIDIDELKAF 248 (313)
T ss_pred cCCeEEEEecCHHHHHHH
Confidence 899999999998877654
No 64
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=44.44 E-value=38 Score=29.19 Aligned_cols=102 Identities=13% Similarity=0.004 Sum_probs=49.6
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012505 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (462)
Q Consensus 137 kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (462)
||++-+-|+. -...+.+.|++.|.+|+. +.... +. +.. .+..-..+.+.|.+..+|+||.+++-|-
T Consensus 1 KI~igsDh~g~~lK~~i~~~L~~~g~eV~D-~G~~~-~~-~~d-----y~~~a~~va~~V~~~~~d~GIliCgtGi---- 68 (140)
T PF02502_consen 1 KIAIGSDHAGFELKEAIKEYLEEKGYEVID-FGTYS-ED-SVD-----YPDFAEKVAEAVASGEADRGILICGTGI---- 68 (140)
T ss_dssp EEEEEE-GGGHHHHHHHHHHHHHTTEEEEE-ESESS-TS-T-------HHHHHHHHHHHHHTTSSSEEEEEESSSH----
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHCCCEEEE-eCCCC-CC-CCC-----HHHHHHHHHHHHHcccCCeEEEEcCCCh----
Confidence 4555555532 234667778888998862 22211 11 111 1333456777787777777776665542
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 215 vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
+.-++. -..| .|.+..+++........+.++..|+.
T Consensus 69 -------------G~~iaA---NK~~--GIrAa~~~d~~~A~~ar~hNdaNVL~ 104 (140)
T PF02502_consen 69 -------------GMSIAA---NKVP--GIRAALCSDPYSAKMAREHNDANVLC 104 (140)
T ss_dssp -------------HHHHHH---HTST--T--EEE-SSHHHHHHHHHTT--SEEE
T ss_pred -------------hhhhHh---hcCC--CEEEEeeCCHHHHHHHHHhcCCcEEE
Confidence 222211 1223 36666666665555554555555544
No 65
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=44.06 E-value=35 Score=29.43 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+..-|.+.|++|.|+|.-+
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~~~ 36 (141)
T PRK12613 14 LKELIKSFLQEEGYDIIDVTDIN 36 (141)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCC
Confidence 78999999999999999999743
No 66
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=42.06 E-value=84 Score=29.57 Aligned_cols=64 Identities=20% Similarity=0.269 Sum_probs=40.2
Q ss_pred CCCcEEEEeCCCCCc-------------------hHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHH
Q 012505 133 LEGFHIVVDAGNGAG-------------------GFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA 193 (462)
Q Consensus 133 ~~~~kvvvd~~~G~~-------------------~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~ 193 (462)
..+.+|++|++||-. +..+...|++.|.+++- ...+..|. .|..-.++
T Consensus 40 ~~~~~I~IDpGHGG~D~GAig~~g~~EKdvtL~ia~~l~~~L~~~g~~v~m---TR~~D~~~----------~l~~R~~~ 106 (231)
T COG0860 40 LGGKTIVIDPGHGGKDPGAIGPNGTLEKDVTLDIAKRLRDLLRAEGVEVVL---TRTSDTFV----------SLNERVAI 106 (231)
T ss_pred CCCeEEEEcCCCCCCCCCccCCCCCccceeHHHHHHHHHHHHHhCCCEEEE---ecCCCCcC----------CHHHHHHH
Confidence 456899999999841 23455667777765541 23333332 14455566
Q ss_pred HHhcCCcEEEeeCCCC
Q 012505 194 VLDNKADLGIIFDTDV 209 (462)
Q Consensus 194 v~~~~adlgia~D~Dg 209 (462)
+...++|+-+.+-.|+
T Consensus 107 A~~~~adlfiSIH~na 122 (231)
T COG0860 107 ANASGADLFVSIHANA 122 (231)
T ss_pred HHhcCCCEEEEEecCC
Confidence 7777889888876664
No 67
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=41.41 E-value=40 Score=24.38 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=29.7
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCCCChh
Q 012505 419 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPALDTS 453 (462)
Q Consensus 419 P~irvy-~Ea~~~~~a~~l~~~~~~~i~~~~~~~~~ 453 (462)
|.++|+ .++.|.+.-+++.+.+.+.+.+.+..+.+
T Consensus 2 P~v~i~l~~grt~eqk~~l~~~it~~l~~~lg~p~~ 37 (64)
T PRK01964 2 PIVQIQLLEGRPEEKIKNLIREVTEAISATLDVPKE 37 (64)
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcChh
Confidence 889999 58899999999999999998887766544
No 68
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=40.09 E-value=91 Score=27.03 Aligned_cols=91 Identities=11% Similarity=-0.032 Sum_probs=48.2
Q ss_pred HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHH
Q 012505 149 FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLI 228 (462)
Q Consensus 149 ~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~ 228 (462)
..+.+.|++.|++|+. +-+.. .=+... +..-..+.+.|.+..+|.||.++|-|= |
T Consensus 14 ~~l~~~L~~~g~eV~D-~G~~~--~~~~dY-----pd~a~~va~~V~~g~~~~GIliCGtGi--------G--------- 68 (144)
T TIGR00689 14 SEIIEHLKQKGHEVID-CGTLY--DERVDY-----PDYAKLVADKVVAGEVSLGILICGTGI--------G--------- 68 (144)
T ss_pred HHHHHHHHHCCCEEEE-cCCCC--CCCCCh-----HHHHHHHHHHHHcCCCceEEEEcCCcH--------H---------
Confidence 3566778888998862 22111 001111 233356677777766667666665541 1
Q ss_pred HHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEE
Q 012505 229 ALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRF 269 (462)
Q Consensus 229 ~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t 269 (462)
.-++. - +-+.|.+..+++........+.++..|+.-
T Consensus 69 ~siaA---N--K~~GIraa~~~d~~~A~~ar~hNnaNVl~l 104 (144)
T TIGR00689 69 MSIAA---N--KFKGIRAALCVDEYTAALARQHNDANVLCL 104 (144)
T ss_pred HHHHH---h--cCCCeEEEEECCHHHHHHHHHhcCCcEEEE
Confidence 11111 1 223476666666655555556666666543
No 69
>PF12909 DUF3832: Protein of unknown function (DUF3832); InterPro: IPR024308 This domain found in bacteria and Acanthamoeba polyphaga mimivirus (APMV) L591 protein has no known function. In Q0AZ30 from SWISSPROT and other uncharacterised proteins this domain is found C-terminal, while the N terminus shows remote homology to the bacterial toxin/antitoxin 'addiction module' (PF12910 from PFAM).; PDB: 3K6Q_C.
Probab=39.17 E-value=52 Score=25.98 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=25.9
Q ss_pred ecCeEEEEeecCCCceeEEEEeeCCHHH-HHHHHHHHHHHhhcCC
Q 012505 405 GSGGWFLLRLSLHDPVLPLNIEAPSRED-AVKLGLAVAAATKEFP 448 (462)
Q Consensus 405 ~~~~wvliRpSgTEP~irvy~Ea~~~~~-a~~l~~~~~~~i~~~~ 448 (462)
.+|||+.+--.+. .||++++|.+. .+++++.+++--+.|.
T Consensus 14 e~dg~~~~~l~~l----di~~~g~T~eeA~~~lie~l~dYAedy~ 54 (89)
T PF12909_consen 14 EDDGSITVSLPEL----DIYANGPTLEEAIEDLIEDLRDYAEDYM 54 (89)
T ss_dssp EETTEEEEEECCG----TEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEecCe----eEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5688986655444 49999999855 4555555555444443
No 70
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=38.59 E-value=7.1 Score=40.25 Aligned_cols=29 Identities=24% Similarity=0.216 Sum_probs=23.1
Q ss_pred eEEEEec-CeEEEEeecCCCceeEEEEeeC
Q 012505 400 QVRVSGS-GGWFLLRLSLHDPVLPLNIEAP 428 (462)
Q Consensus 400 ~iki~~~-~~wvliRpSgTEP~irvy~Ea~ 428 (462)
+..|.+. |.|+.+||.+|-|++|.|+|-.
T Consensus 66 mY~F~Dkggr~laLRpe~Tapv~R~~~en~ 95 (429)
T COG0124 66 MYTFKDKGGRSLALRPELTAPVARAVAENK 95 (429)
T ss_pred eEEEEeCCCCEEEecccCcHHHHHHHHhcc
Confidence 3666543 5699999999999999998763
No 71
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=37.49 E-value=3.2e+02 Score=25.22 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=18.5
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccceEEEE-ecCeE
Q 012505 374 EAVLKHLENRVDSDPKLQKAPVNYEGQVRVS-GSGGW 409 (462)
Q Consensus 374 ~~v~~~l~~~~~~~~~~~~~~~~~dG~iki~-~~~~w 409 (462)
.+..+.|++.+.+. .....+-|||-++ ++.||
T Consensus 160 ~K~v~~Lr~~F~~~----gLtFSIGGQISfDvFP~GW 192 (252)
T KOG3189|consen 160 EKFVEALREEFADY----GLTFSIGGQISFDVFPKGW 192 (252)
T ss_pred HHHHHHHHHHhccc----CeeEEECCeEEEeecCCCc
Confidence 34444555555432 1233467778888 88888
No 72
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=37.38 E-value=1.2e+02 Score=26.85 Aligned_cols=23 Identities=9% Similarity=0.134 Sum_probs=15.7
Q ss_pred HHHHHHHHHhcCCcEEEeeCCCC
Q 012505 187 MKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 187 l~~l~~~v~~~~adlgia~D~Dg 209 (462)
++.|.......+..+.++||+-.
T Consensus 32 i~~L~~y~~~~~~~v~VVFDa~~ 54 (166)
T PF05991_consen 32 IEMLSEYAQFSGYEVIVVFDAYK 54 (166)
T ss_pred HHHHHHHhcccCCEEEEEEeCCc
Confidence 34445555567789999999743
No 73
>COG0698 RpiB Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]
Probab=36.85 E-value=1.6e+02 Score=25.75 Aligned_cols=66 Identities=20% Similarity=0.153 Sum_probs=35.9
Q ss_pred EEEEeCCCCCch--HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 137 HIVVDAGNGAGG--FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 137 kvvvd~~~G~~~--~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
||++-|-|.... ..+...|++.|.+++. ..+. +..-+.+.| ..-..+.+.|.+..+|+||..+|-|
T Consensus 2 kIaig~Dhag~~lK~~I~~~Lk~~g~~v~D-~G~~-~~~~~~dyp-----~~a~~va~~v~~~~~d~GIliCGTG 69 (151)
T COG0698 2 KIAIGSDHAGYELKEIIIDHLKSKGYEVID-FGTY-TDEGSVDYP-----DYAKKVAEAVLNGEADLGILICGTG 69 (151)
T ss_pred cEEEEcCcccHHHHHHHHHHHHHCCCEEEe-cccc-CCCCCcchH-----HHHHHHHHHHHcCCCCeeEEEecCC
Confidence 566666665433 3666778888988762 1111 011011222 2224556666666778887776655
No 74
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=35.57 E-value=40 Score=28.59 Aligned_cols=25 Identities=28% Similarity=0.488 Sum_probs=20.5
Q ss_pred HHHHHHHHHhCCCcEEEeCCCChhh
Q 012505 3 QDAVSRGITGAGLDVVQYGLASTPA 27 (462)
Q Consensus 3 ~~a~a~gL~s~Gi~V~~~g~~ptP~ 27 (462)
|+.++..|.++|++|+++|.--+|.
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e 40 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQE 40 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHH
Confidence 5678889999999999998755554
No 75
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=35.54 E-value=59 Score=28.34 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+..-|...|++|.|+|.
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~ 34 (148)
T PRK05571 14 LKEEIIEHLEELGHEVIDLGP 34 (148)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999985
No 76
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=35.45 E-value=74 Score=27.51 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+.+-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (142)
T PRK08621 14 LKEVVKDYLEDNKYEVVDVTE 34 (142)
T ss_pred HHHHHHHHHHHCCCEEEECCC
Confidence 789999999999999999986
No 77
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=35.29 E-value=75 Score=27.44 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~i~~~L~~~G~eV~D~G~ 34 (141)
T TIGR01118 14 LKDVIKNFLVDNGFEVIDVTE 34 (141)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 78
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=34.94 E-value=59 Score=22.67 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=26.8
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 419 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 419 P~irvy-~Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
|.++|+ .++.+.+.-+++.+.+.+.+.+....
T Consensus 1 P~i~i~~~~grt~eqk~~l~~~i~~~l~~~~g~ 33 (58)
T cd00491 1 PFVQIYILEGRTDEQKRELIERVTEAVSEILGA 33 (58)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 788998 57789999999999999988876644
No 79
>PHA00689 hypothetical protein
Probab=34.61 E-value=29 Score=23.82 Aligned_cols=15 Identities=40% Similarity=1.019 Sum_probs=11.4
Q ss_pred cceEEEEecCe-EEEEe
Q 012505 398 EGQVRVSGSGG-WFLLR 413 (462)
Q Consensus 398 dG~iki~~~~~-wvliR 413 (462)
-| +|+..++| |+|+-
T Consensus 26 tg-lrweddggewvlme 41 (62)
T PHA00689 26 TG-LRWEDDGGEWVLME 41 (62)
T ss_pred cC-ceeecCCCcEEEEe
Confidence 47 99987665 99974
No 80
>PLN02204 diacylglycerol kinase
Probab=33.06 E-value=2.4e+02 Score=30.51 Aligned_cols=84 Identities=13% Similarity=0.034 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchH-----HHHHHHhhcCCccccccccccCCCCCCCCCCCCcH
Q 012505 110 YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGF-----FAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDK 184 (462)
Q Consensus 110 ~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~-----~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~ 184 (462)
..+.+++.+...+..+. .+.+++.|+|.+..|-+.. -+..+|++.|+++.. +..... -
T Consensus 140 ~~~~w~~~l~~~l~~~~----~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v-~~T~~a------------g 202 (601)
T PLN02204 140 TCQSWVDRLNASLNKEV----GRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKV-IVTERA------------G 202 (601)
T ss_pred HHHHHHHHHHHHHhhcc----CCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEE-EEecCc------------c
Confidence 55667777777775432 3446788999998876542 356678888887531 111110 1
Q ss_pred HHHHHHHHHHH--hcCCcEEEeeCCCCc
Q 012505 185 TAMKAIIQAVL--DNKADLGIIFDTDVD 210 (462)
Q Consensus 185 ~~l~~l~~~v~--~~~adlgia~D~DgD 210 (462)
.+.+.+.++.. ..++|..++.-|||-
T Consensus 203 hA~d~~~~~~~~~l~~~D~VVaVGGDGt 230 (601)
T PLN02204 203 HAFDVMASISNKELKSYDGVIAVGGDGF 230 (601)
T ss_pred hHHHHHHHHhhhhccCCCEEEEEcCccH
Confidence 22333333322 456788888888873
No 81
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=32.79 E-value=69 Score=22.76 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=27.8
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012505 419 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPALD 451 (462)
Q Consensus 419 P~irvy-~Ea~~~~~a~~l~~~~~~~i~~~~~~~ 451 (462)
|.++|+ .++.|.+.-++|.+.+.+.+.+.+..+
T Consensus 2 P~i~I~~~~grs~eqk~~l~~~it~~l~~~~~~p 35 (62)
T PRK00745 2 PTFHIELFEGRTVEQKRKLVEEITRVTVETLGCP 35 (62)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 788998 567899999999999999888876653
No 82
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=32.64 E-value=42 Score=28.97 Aligned_cols=25 Identities=32% Similarity=0.680 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCcEEEeCCCChhhh
Q 012505 4 DAVSRGITGAGLDVVQYGLASTPAM 28 (462)
Q Consensus 4 ~a~a~gL~s~Gi~V~~~g~~ptP~~ 28 (462)
+-+++.|++.|++|+..|...||.=
T Consensus 30 kvia~~l~d~GfeVi~~g~~~tp~e 54 (143)
T COG2185 30 KVIARALADAGFEVINLGLFQTPEE 54 (143)
T ss_pred HHHHHHHHhCCceEEecCCcCCHHH
Confidence 4578899999999999999888863
No 83
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=32.64 E-value=47 Score=28.39 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCcEEEeCCCChhh
Q 012505 3 QDAVSRGITGAGLDVVQYGLASTPA 27 (462)
Q Consensus 3 ~~a~a~gL~s~Gi~V~~~g~~ptP~ 27 (462)
++-++..|.++|++|+++|.--+|.
T Consensus 18 k~iv~~~l~~~GfeVi~LG~~v~~e 42 (134)
T TIGR01501 18 NKILDHAFTNAGFNVVNLGVLSPQE 42 (134)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4567889999999999998755554
No 84
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=32.57 E-value=69 Score=27.77 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+..-|.+.|++|.|+|.
T Consensus 12 lK~~l~~~L~~~g~eV~D~G~ 32 (144)
T TIGR00689 12 LKSEIIEHLKQKGHEVIDCGT 32 (144)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 85
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=32.52 E-value=1.3e+02 Score=29.81 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=43.7
Q ss_pred cEEEEeCCCCCch--HHHHHHHhhc-CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCC
Q 012505 136 FHIVVDAGNGAGG--FFAAKVLEPL-GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDT 207 (462)
Q Consensus 136 ~kvvvd~~~G~~~--~~~~~ll~~l-g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~ 207 (462)
-||.+-+..|+.. .+..++.+.| |.+++ .|.+.-|||.. +-+....+++++++.|+.++.-|
T Consensus 30 ~kVLi~YGGGSIKrnGvydqV~~~Lkg~~~~---------E~~GVEPNP~~-~Tv~kaV~i~kee~idflLAVGG 94 (384)
T COG1979 30 AKVLIVYGGGSIKKNGVYDQVVEALKGIEVI---------EFGGVEPNPRL-ETLMKAVEICKEENIDFLLAVGG 94 (384)
T ss_pred CeEEEEecCccccccchHHHHHHHhcCceEE---------EecCCCCCchH-HHHHHHHHHHHHcCceEEEEecC
Confidence 4788888888643 3566666665 44444 24456678874 56778889999999999998754
No 86
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=30.79 E-value=2.3e+02 Score=29.90 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=32.6
Q ss_pred ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCch--HH----HHHHHhhcCCccc
Q 012505 109 DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGG--FF----AAKVLEPLGAKTS 163 (462)
Q Consensus 109 ~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~--~~----~~~ll~~lg~~v~ 163 (462)
+..+.+++.+.+.++.. .+.+++.|++.|..|-+. .+ +..+|+..|+++.
T Consensus 92 ~~~~~w~~~~~~~~~~~-----~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~ 147 (481)
T PLN02958 92 ESRRLWCQKLRDYLDSL-----GRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLT 147 (481)
T ss_pred HHHHHHHHHHHHHHhhc-----cCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEE
Confidence 45677888888877532 133467899998777544 33 3457788887753
No 87
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=30.63 E-value=2.5e+02 Score=24.67 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.7
Q ss_pred CCCceeEEEcCCCccccchhHHHHHHHHH
Q 012505 207 TDVDRSAAVDSTGHELNRNRLIALMSAIV 235 (462)
Q Consensus 207 ~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~ 235 (462)
+++|.+.+.|++|+.++..++..++-.+.
T Consensus 65 ~~~~~~i~LDe~Gk~~sS~~fA~~l~~~~ 93 (157)
T PRK00103 65 PKGARVIALDERGKQLSSEEFAQELERWR 93 (157)
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 34678899999999999999999988763
No 88
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.23 E-value=1.1e+02 Score=29.25 Aligned_cols=60 Identities=23% Similarity=0.290 Sum_probs=35.3
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcC
Q 012505 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNK 198 (462)
Q Consensus 134 ~~~kvvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~ 198 (462)
.++.|++|+.|..+. ..++..--.+|++ ++ +.|.+||... ...|+.-.+ +.+.+++++.+
T Consensus 183 ~~lPVivd~SHs~G~r~~v~~~a~AAvA~GAdGl~I-E~H~~P~~A~-sD~~q~l~~---~~l~~l~~~~~ 248 (250)
T PRK13397 183 TDLPIIVDVSHSTGRRDLLLPAAKIAKAVGANGIMM-EVHPDPDHAL-SDAAQQIDY---KQLEQLGQELW 248 (250)
T ss_pred hCCCeEECCCCCCcccchHHHHHHHHHHhCCCEEEE-EecCCccccc-CchhhhCCH---HHHHHHHHHhc
Confidence 467899999998875 2344445578999 66 4565665442 233444444 34444444433
No 89
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=30.15 E-value=83 Score=27.23 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+.+-|.+.|++|.|+|.
T Consensus 13 lK~~l~~~L~~~g~eV~D~G~ 33 (143)
T TIGR01120 13 LKEEIKAFLVERGVKVIDKGT 33 (143)
T ss_pred HHHHHHHHHHHCCCEEEEeCC
Confidence 789999999999999999986
No 90
>PF06029 AlkA_N: AlkA N-terminal domain; InterPro: IPR010316 This domain is found at the N terminus of bacterial AlkA 3.2.2.21 from EC. AlkA (3-methyladenine-DNA glycosylase II) is a base excision repair glycosylase from Escherichia coli. It removes a variety of alkylated bases from DNA, primarily by removing alkylation damage from duplex and single stranded DNA. AlkA flips a 1-azaribose abasic nucleotide out of DNA. This produces a 66 degrees bend in the DNA and a marked widening of the minor groove []. This groove is a large hydrophobic cleft, which is unusually rich in aromatic residues. AlkA recognises electron-deficient methylated bases through pi-donor/acceptor interactions involving the electron-rich aromatic cleft. AlkA is similar in fold and active site location to the bifunctional glycosylase/lyase endonuclease III. This suggests that the two may use similar mechanisms for base excision []. The structural analysis of the AlkA and AlkA-hypoxanthine structures indicate that free hypoxanthine binding in the active site may inhibit glycosylase activity [].; GO: 0003905 alkylbase DNA N-glycosylase activity; PDB: 1MPG_B 3CWS_D 3CW7_C 3CWA_B 3D4V_A 3CWT_C 3CWU_B 3OGD_A 3CVS_C 1PVS_A ....
Probab=29.98 E-value=79 Score=26.24 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=32.9
Q ss_pred CeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCC--ChhhHHH
Q 012505 407 GGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPAL--DTSALDK 457 (462)
Q Consensus 407 ~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~~--~~~~~~~ 457 (462)
.||+-+++...+..++|.++..+.....++... |+.+++| |..+..+
T Consensus 45 ~g~v~v~~~~~~~~l~v~~~~~~~~~l~~~~~r----vRrlfDLdaDp~~I~~ 93 (116)
T PF06029_consen 45 PGWVSVRHDPEKNHLRVTLSLSDLRDLPAVIAR----VRRLFDLDADPQAIEA 93 (116)
T ss_dssp EEEEEEEEETTTTEEEEEE-GGGGGGHHHHHHH----HHHHTTTT--HHHHHH
T ss_pred EEEEEEEEcCCCCEEEEEEEcccHHHHHHHHHH----HHHHhCCCCCHHHHHH
Confidence 489999999999999999999777666654444 5556665 4444443
No 91
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=29.75 E-value=82 Score=28.14 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+.+-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (171)
T TIGR01119 14 VKMEVSEFLKSKGYEVLDVGT 34 (171)
T ss_pred HHHHHHHHHHHCCCEEEEeCC
Confidence 789999999999999999985
No 92
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=29.73 E-value=1.1e+02 Score=29.27 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=37.3
Q ss_pred CCCCcEEEEeCCCCCchHHHHHHH----hhcCCccccccccccCCCCCC-CCCCCCcHHHHHHHHHHHH
Q 012505 132 PLEGFHIVVDAGNGAGGFFAAKVL----EPLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 132 ~~~~~kvvvd~~~G~~~~~~~~ll----~~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~ 195 (462)
....|.|++|+.|+++..-+-.-+ -..|++-+ .+.+.|||.-.- ..+..-.++.++.+.+.++
T Consensus 211 q~THLPVivDpSH~~Grr~lv~pla~AA~AaGAdgl-miEVHp~P~~AlsD~~Qql~~~~f~~l~~~~~ 278 (286)
T COG2876 211 QETHLPVIVDPSHATGRRDLVEPLAKAAIAAGADGL-MIEVHPDPEKALSDAKQQLTPEEFEELVKELR 278 (286)
T ss_pred hhcCCCEEECCCCcccchhhHHHHHHHHHhccCCee-EEEecCCcccccCcccccCCHHHHHHHHHHHH
Confidence 456899999999999987554444 33577754 344566665432 2333333444555544443
No 93
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=29.13 E-value=1.5e+02 Score=23.68 Aligned_cols=48 Identities=19% Similarity=0.193 Sum_probs=28.2
Q ss_pred HHHHHhhcCCcccccc--c-cccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEe
Q 012505 151 AAKVLEPLGAKTSGSQ--F-LEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII 204 (462)
Q Consensus 151 ~~~ll~~lg~~v~~~~--~-~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia 204 (462)
+..+++.+|.+++..+ + ..|||.+-- -+..++.+.+.++..++|+.+.
T Consensus 13 l~~L~~t~g~~vv~~~~q~~~~~~p~~~i------G~GK~eei~~~~~~~~~d~vvf 63 (95)
T PF13167_consen 13 LEELAETAGYEVVGTVVQKRRKPDPKTYI------GSGKVEEIKELIEELDADLVVF 63 (95)
T ss_pred HHHHHHHCCCeEEEEEEecCCCCCcceee------chhHHHHHHHHHhhcCCCEEEE
Confidence 4566777888765211 1 124443311 1455788899998887766544
No 94
>PRK13329 pantothenate kinase; Reviewed
Probab=28.83 E-value=3.1e+02 Score=26.09 Aligned_cols=88 Identities=13% Similarity=0.013 Sum_probs=51.4
Q ss_pred CcEEEEeCCCC-CchHHHHHHHhhcCCcccccccccc-CCCCCCCCCCCCcHHHHHHHHHHH---HhcCCcEEEeeCCCC
Q 012505 135 GFHIVVDAGNG-AGGFFAAKVLEPLGAKTSGSQFLEP-DGMFPNHIPNPEDKTAMKAIIQAV---LDNKADLGIIFDTDV 209 (462)
Q Consensus 135 ~~kvvvd~~~G-~~~~~~~~ll~~lg~~v~~~~~~~~-d~~f~~~~p~P~~~~~l~~l~~~v---~~~~adlgia~D~Dg 209 (462)
.-+|++++..| .....+...++.+++.+. .+.... ...+.+..++|+.-. .+.....+ ...+-++.++-=|-+
T Consensus 52 ~~~v~vssV~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~gi~~~Y~~P~~LG-~DR~~a~vaA~~~~~~~~lViD~GTA 129 (249)
T PRK13329 52 PARVLGCNVAGDAVARRVAEQLELWDVAPR-WVVASAAECGVRNGYDHPARLG-ADRWVALIGARHGPARPCLVVMVGTA 129 (249)
T ss_pred CCeEEEEecCcHHHHHHHHHHHHHhCCceE-EEecCccccCCeecCCChHhcc-HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 34688888866 445566667777787664 232222 223445667776532 13333222 234556666666777
Q ss_pred ceeEEEcCCCccccc
Q 012505 210 DRSAAVDSTGHELNR 224 (462)
Q Consensus 210 DR~~~vd~~G~~l~~ 224 (462)
=-+-++|.+|+++.|
T Consensus 130 ~TiD~v~~~g~~lGG 144 (249)
T PRK13329 130 VTVDALDADGEFLGG 144 (249)
T ss_pred eeEEEEcCCCcEEEE
Confidence 777888888876644
No 95
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=28.74 E-value=50 Score=24.02 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=21.4
Q ss_pred cCCCceeEEEEeeCCHHHHHHHHHHHH
Q 012505 415 SLHDPVLPLNIEAPSREDAVKLGLAVA 441 (462)
Q Consensus 415 SgTEP~irvy~Ea~~~~~a~~l~~~~~ 441 (462)
.|+...++||+...+.++|+++++.++
T Consensus 40 ~g~~~~~~v~V~~~d~~~A~~il~~~~ 66 (67)
T PF09413_consen 40 PGTGGQVEVYVPEEDYERAREILEEFE 66 (67)
T ss_dssp S--SSSEEEEEEGGGHHHHHHHHHHTT
T ss_pred cCccCceEEEECHHHHHHHHHHHHHhc
Confidence 455555999999999999999998765
No 96
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=28.49 E-value=1.4e+02 Score=28.57 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=36.7
Q ss_pred CcEEEEeCCCCCch----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHH
Q 012505 135 GFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 135 ~~kvvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (462)
++.|++|+.|..+. ..++..--.+|++ ++ +.|..||-..+. .+..-+++.|..+.+.++
T Consensus 194 ~~pV~~ds~Hs~G~r~~~~~~~~aAva~Ga~gl~i-E~H~t~d~a~~D-~~~sl~p~~l~~lv~~i~ 258 (260)
T TIGR01361 194 HLPIIVDPSHAAGRRDLVIPLAKAAIAAGADGLMI-EVHPDPEKALSD-SKQQLTPEEFKRLVKELR 258 (260)
T ss_pred CCCEEEcCCCCCCccchHHHHHHHHHHcCCCEEEE-EeCCCccccCCc-chhcCCHHHHHHHHHHHh
Confidence 57899999998772 3444455678999 56 467777777643 333333444555544443
No 97
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=28.38 E-value=83 Score=27.13 Aligned_cols=49 Identities=20% Similarity=0.334 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC-----hhhhhhhhcccCCcccCCCCeEEEEcCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS-----TPAMFNSTLTEGDAFFCPVDGAIMITAS 52 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p-----tP~~~~a~~~~~~~~~l~a~gGI~ITaS 52 (462)
||+.+.+-|.+.|++|.|+|... -|.+.+.+...- ..-.++-||.|-.+
T Consensus 13 lK~~i~~~L~~~g~eV~D~G~~~~~~~dy~~~a~~va~~V--~~~~~d~GIliCgt 66 (140)
T PF02502_consen 13 LKEAIKEYLEEKGYEVIDFGTYSEDSVDYPDFAEKVAEAV--ASGEADRGILICGT 66 (140)
T ss_dssp HHHHHHHHHHHTTEEEEEESESSTST--HHHHHHHHHHHH--HTTSSSEEEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCCHHHHHHHHHHHH--HcccCCeEEEEcCC
Confidence 68999999999999999998665 344443332110 01234667776543
No 98
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=28.31 E-value=79 Score=22.37 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=28.7
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCCCh
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPALDT 452 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~~~ 452 (462)
|.++|.+ ++.|.+.-++|.+.+.+.+.+....+.
T Consensus 2 P~i~i~~~~Grs~eqk~~l~~~it~~l~~~~~~p~ 36 (61)
T PRK02220 2 PYVHIKLIEGRTEEQLKALVKDVTAAVSKNTGAPA 36 (61)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCh
Confidence 7888984 789999999999999999988776643
No 99
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=28.24 E-value=91 Score=27.28 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=19.5
Q ss_pred HHHHHHHHHHh--CCCcEEEeCC
Q 012505 2 LQDAVSRGITG--AGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s--~Gi~V~~~g~ 22 (462)
||+.+..-|.+ .|++|.|+|.
T Consensus 16 lK~~l~~~L~~~~~g~eV~D~G~ 38 (151)
T PTZ00215 16 LKNEIIDYIKNKGKEYKIEDMGT 38 (151)
T ss_pred HHHHHHHHHHhccCCCEEEEcCC
Confidence 78999999999 9999999985
No 100
>PF14492 EFG_II: Elongation Factor G, domain II; PDB: 1WDT_A 2DY1_A 2XEX_A 1ELO_A 2XSY_Y 2WRK_Y 1DAR_A 2WRI_Y 2XUY_Y 3J0E_H ....
Probab=27.93 E-value=1.1e+02 Score=22.95 Aligned_cols=33 Identities=39% Similarity=0.559 Sum_probs=27.3
Q ss_pred CceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 418 DPVLPLNIEAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 418 EP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
+|++++-+|+.++....++.+.+.++.++=..+
T Consensus 3 ~Pv~~~~i~p~~~~d~~kl~~aL~~l~~eDP~l 35 (75)
T PF14492_consen 3 PPVLSVAIEPKNKEDEPKLSEALQKLSEEDPSL 35 (75)
T ss_dssp S-SEEEEEEESSHHHHHHHHHHHHHHHHH-TTS
T ss_pred CCeEEEEEEECCHhHHHHHHHHHHHHHhcCCeE
Confidence 799999999999999999999999988774443
No 101
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=27.51 E-value=3.9e+02 Score=27.29 Aligned_cols=104 Identities=22% Similarity=0.195 Sum_probs=58.5
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEE-
Q 012505 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAV- 215 (462)
Q Consensus 137 kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~v- 215 (462)
||+ -..||.-+.-+.+++++.|.++. .+.+++. ..++| +.+.+.+++ |+|-+-++++
T Consensus 82 kVL-v~~nG~FG~R~~~ia~~~g~~v~-~~~~~wg-----~~v~p------~~v~~~L~~---------~~~~~~V~~vH 139 (383)
T COG0075 82 KVL-VVVNGKFGERFAEIAERYGAEVV-VLEVEWG-----EAVDP------EEVEEALDK---------DPDIKAVAVVH 139 (383)
T ss_pred eEE-EEeCChHHHHHHHHHHHhCCceE-EEeCCCC-----CCCCH------HHHHHHHhc---------CCCccEEEEEe
Confidence 443 45789999999999999999987 3544432 22333 344444442 3555555555
Q ss_pred --cCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012505 216 --DSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (462)
Q Consensus 216 --d~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (462)
+..|..-+=.++..+.-.+ +..+|++-+||-.-.+.=..++|+.+.-
T Consensus 140 ~ETSTGvlnpl~~I~~~~k~~------g~l~iVDaVsS~Gg~~~~vd~wgiDv~i 188 (383)
T COG0075 140 NETSTGVLNPLKEIAKAAKEH------GALLIVDAVSSLGGEPLKVDEWGIDVAI 188 (383)
T ss_pred ccCcccccCcHHHHHHHHHHc------CCEEEEEecccCCCcccchhhcCccEEE
Confidence 3355443333444443332 4556667888744443322445666654
No 102
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=26.93 E-value=2.5e+02 Score=27.43 Aligned_cols=62 Identities=19% Similarity=0.260 Sum_probs=39.0
Q ss_pred CcEEEEeCCCCC------c--h-----------HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHH
Q 012505 135 GFHIVVDAGNGA------G--G-----------FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 135 ~~kvvvd~~~G~------~--~-----------~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (462)
+..||+|++||- + + .-+.++|++-|++|+- ...+..|+ .|.+=.+++.
T Consensus 56 ~~~IvIDpGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~~V~l---TR~~D~~v----------sL~~R~~~An 122 (287)
T PRK10319 56 KRVVMLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL---TRSGDTFI----------PLYDRVEIAH 122 (287)
T ss_pred CeEEEEECCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCCEEEE---eCCCCCCC----------CHHHHHHHHH
Confidence 457899999982 1 1 1235566666887751 12222332 1556667788
Q ss_pred hcCCcEEEeeCCCC
Q 012505 196 DNKADLGIIFDTDV 209 (462)
Q Consensus 196 ~~~adlgia~D~Dg 209 (462)
+.++|+-|.+=.|+
T Consensus 123 ~~~ADlFISIH~Ns 136 (287)
T PRK10319 123 KHGADLFMSIHADG 136 (287)
T ss_pred hcCCCEEEEecCCC
Confidence 88999988877765
No 103
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=26.84 E-value=1.2e+02 Score=26.31 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~ 34 (148)
T TIGR02133 14 YKEALWLDLAAHEPEVCDVGV 34 (148)
T ss_pred HHHHHHHHHHHCCCEEEECCC
Confidence 689999999999999999985
No 104
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=26.64 E-value=1e+02 Score=21.97 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=27.4
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
|.++|+. ++.|.|.-++|.+.+.+.+.+....
T Consensus 2 P~i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~ 34 (60)
T PRK02289 2 PFVRIDLFEGRSQEQKNALAREVTEVVSRIAKA 34 (60)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 7888987 7899999999999999988876654
No 105
>PRK08452 flagellar protein FlaG; Provisional
Probab=26.41 E-value=2.7e+02 Score=23.44 Aligned_cols=50 Identities=10% Similarity=0.223 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012505 185 TAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (462)
Q Consensus 185 ~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~Ll~~~ 234 (462)
++.+.+-+.+...+.++=|.+|.+.+|+.+ +|. .| |-+.+++++.|+..+
T Consensus 57 ~~ve~lN~~~~~~~~~L~F~~de~~~~~vVkVvD~~T~eVIRqIP~Ee~L~l~~~m 112 (124)
T PRK08452 57 ELTEKLNEEMKRLDTNIRFGYNDKIKGLVVSVKEANGGKVIREIPSKEAIELMEYM 112 (124)
T ss_pred HHHHHHHHHHHhhCCceEEEEcCCCCcEEEEEEECCCCceeeeCCCHHHHHHHHHH
Confidence 445566667777888999999999999876 464 45 567788888887765
No 106
>COG4019 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.39 E-value=2.4e+02 Score=23.80 Aligned_cols=82 Identities=23% Similarity=0.193 Sum_probs=51.5
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEee-----CCCCce
Q 012505 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIF-----DTDVDR 211 (462)
Q Consensus 137 kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~-----D~DgDR 211 (462)
|+||-..|----..+..++++++..-. ....-|..|..-.|-|- +....=.++-.+||+.|+- -|.|.=
T Consensus 38 r~vV~t~N~~K~~aindvlrrf~l~Ea--eml~~~T~~ADlTrmPA----~tKalmaldis~ADlvIARGRLGvPGSGsm 111 (156)
T COG4019 38 RIVVATNNQKKFKAINDVLRRFCLAEA--EMLDIDTRFADLTRMPA----LTKALMALDISKADLVIARGRLGVPGSGSM 111 (156)
T ss_pred eEEEecCCHHHHHHHHHHHHHhccchH--HHhcCccchhhcccChH----HHHHHHhccccCCcEEEeeccccCCCCCcE
Confidence 677777776666678889999986432 12344455544333332 2222234556789998874 466776
Q ss_pred eEEEcCCCccccc
Q 012505 212 SAAVDSTGHELNR 224 (462)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (462)
+.+.|+.|++++.
T Consensus 112 lVimD~rgRlLtA 124 (156)
T COG4019 112 LVIMDERGRLLTA 124 (156)
T ss_pred EEEEccccceeee
Confidence 7777999998764
No 107
>KOG3852 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.37 E-value=3.3e+02 Score=26.68 Aligned_cols=94 Identities=17% Similarity=0.216 Sum_probs=45.9
Q ss_pred HHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHH
Q 012505 5 AVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAAD 84 (462)
Q Consensus 5 a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie~~~~ 84 (462)
-+-+-|.++|+.|.|.. +.-.++=+|-+|||.-.|-.+.++-.-..+...+.+-.-+..+.
T Consensus 86 vvr~~l~~~gi~v~dvR-------------------LnGsaAs~vl~~d~gl~ykDLDlIF~v~l~~e~eFq~vkd~Vl~ 146 (426)
T KOG3852|consen 86 VVRSRLEEQGIEVRDVR-------------------LNGSAASHVLHSDNGLSYKDLDLIFPVDLPGEAEFQLVKDVVLD 146 (426)
T ss_pred HHHHHHHhcCeeEEEEe-------------------ecCcccceeeecCCCcCccccceEEeecCCCchhhHHHHHHHHH
Confidence 34455667777777652 11233445666666555554444322222222233333222222
Q ss_pred HhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHH
Q 012505 85 IYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVR 123 (462)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~ 123 (462)
....|-.+. .....+......+.|++.+.+...
T Consensus 147 clldflP~~------v~keKisp~tlKdaYvqKlvKVct 179 (426)
T KOG3852|consen 147 CLLDFLPEG------VNKEKISPLTLKDAYVQKLVKVCT 179 (426)
T ss_pred HHHHhCccc------ccccccChhHHHHHHHHHHHHhcc
Confidence 222232222 223445555688999999988763
No 108
>cd02395 SF1_like-KH Splicing factor 1 (SF1) K homology RNA-binding domain (KH). Splicing factor 1 (SF1) specifically recognizes the intron branch point sequence (BPS) UACUAAC in the pre-mRNA transcripts during spliceosome assembly. We show that the KH-QUA2 region of SF1 defines an enlarged KH (hnRNP K) fold which is necessary and sufficient for BPS binding. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=26.00 E-value=2.6e+02 Score=23.32 Aligned_cols=29 Identities=24% Similarity=0.098 Sum_probs=21.8
Q ss_pred eEEEEeeCC--HHHHHHHHHHHHHHhhcCCC
Q 012505 421 LPLNIEAPS--REDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 421 irvy~Ea~~--~~~a~~l~~~~~~~i~~~~~ 449 (462)
++|+++|.+ .+.+++..+.+..++.....
T Consensus 68 lhV~I~a~~~~~e~~~~A~~~I~~ll~~~~~ 98 (120)
T cd02395 68 LHVLITAETPPEEALAKAVEAIEELLKPAIE 98 (120)
T ss_pred cEEEEEeCCcHHHHHHHHHHHHHHHhccCCC
Confidence 899999999 77777777777776665543
No 109
>PRK13322 pantothenate kinase; Reviewed
Probab=25.65 E-value=4.1e+02 Score=25.15 Aligned_cols=87 Identities=15% Similarity=0.050 Sum_probs=50.5
Q ss_pred cEEEEeCCCC-CchHHHHHHHhh-cCCccccccccccC-CCCCCCCCCCCcHHHHHHHHHH---HHhcCCcEEEeeCCCC
Q 012505 136 FHIVVDAGNG-AGGFFAAKVLEP-LGAKTSGSQFLEPD-GMFPNHIPNPEDKTAMKAIIQA---VLDNKADLGIIFDTDV 209 (462)
Q Consensus 136 ~kvvvd~~~G-~~~~~~~~ll~~-lg~~v~~~~~~~~d-~~f~~~~p~P~~~~~l~~l~~~---v~~~~adlgia~D~Dg 209 (462)
-+|++.+..+ .....+...+++ +++++. .+..... ..+.+...+|+.-. .+..... ....+-++.++-=|-+
T Consensus 49 ~~v~vsSV~p~~~~~~l~~~l~~~~~~~~~-~v~~~~~~~gv~~~y~~p~~LG-~DR~~~~~aA~~~~~~~~lViD~GTA 126 (246)
T PRK13322 49 TRCRIVSVLSEEETARLVAILEKRLGIPVV-FAKVAAELAGVRNGYEDPEQLG-IDRWLALLGAFHLAKNACLVIDCGTA 126 (246)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHhCCCeE-EEecCCcCCCceecCCChhhcc-HHHHHHHHHHHHHcCCCEEEEEcCCe
Confidence 3688898877 555667777755 677765 3332322 33445667776532 1333222 2233445666655677
Q ss_pred ceeEEEcCCCccccc
Q 012505 210 DRSAAVDSTGHELNR 224 (462)
Q Consensus 210 DR~~~vd~~G~~l~~ 224 (462)
=-+-+++.+|+++.|
T Consensus 127 ~TiD~v~~~g~~~GG 141 (246)
T PRK13322 127 VTIDLVDADGQHLGG 141 (246)
T ss_pred eEEEEEcCCCcEeee
Confidence 777778888876643
No 110
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=25.31 E-value=1.9e+02 Score=28.06 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=23.8
Q ss_pred EEEeCCCCCchHHHHHHHhhcCCccc
Q 012505 138 IVVDAGNGAGGFFAAKVLEPLGAKTS 163 (462)
Q Consensus 138 vvvd~~~G~~~~~~~~ll~~lg~~v~ 163 (462)
|+|+-+.|+|...+-.+|+.+|.-++
T Consensus 4 vIiTGlSGaGKs~Al~~lED~Gy~cv 29 (284)
T PF03668_consen 4 VIITGLSGAGKSTALRALEDLGYYCV 29 (284)
T ss_pred EEEeCCCcCCHHHHHHHHHhcCeeEE
Confidence 67899999999999999999998765
No 111
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=24.78 E-value=5.3e+02 Score=25.37 Aligned_cols=106 Identities=16% Similarity=0.282 Sum_probs=60.6
Q ss_pred EEEEeCCCCCchHHHHHHH------hhcCCccccccccccCCCC----CCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeC
Q 012505 137 HIVVDAGNGAGGFFAAKVL------EPLGAKTSGSQFLEPDGMF----PNHIPNPEDKTAMKAIIQAVLDNKADLGIIFD 206 (462)
Q Consensus 137 kvvvd~~~G~~~~~~~~ll------~~lg~~v~~~~~~~~d~~f----~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D 206 (462)
+--+++|-|+-+.-+..+. ..+|+..+ .++-.|++.. +...-+|.. ..+...+.+++.--|++++.|
T Consensus 46 ~~~I~SMPgv~r~s~d~l~~~~~~~~~lGi~av-~LFgvp~~~~Kd~~gs~A~~~~g--ivqravr~ik~~~p~l~iitD 122 (330)
T COG0113 46 KEEIPSMPGVYRYSLDRLVEEAEELVDLGIPAV-ILFGVPDDSKKDETGSEAYDPDG--IVQRAVRAIKEAFPELVVITD 122 (330)
T ss_pred ccccCCCCCceeccHHHHHHHHHHHHhcCCCEE-EEeCCCcccccCcccccccCCCC--hHHHHHHHHHHhCCCeEEEee
Confidence 4445667777665555553 34677765 3554443321 222334432 245555666654448999988
Q ss_pred C------CCceeEEEcCCCccccchhHHHHHHHHHHHhC-CCCeEEE
Q 012505 207 T------DVDRSAAVDSTGHELNRNRLIALMSAIVLEEH-PGTTIVT 246 (462)
Q Consensus 207 ~------DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~-~~~~vv~ 246 (462)
- |=-.++++++.| .+..|+++.+++...+.+- -|..+|+
T Consensus 123 vcLceyT~HGHcGil~~~~-~V~ND~Tle~l~k~Avs~AeAGAdivA 168 (330)
T COG0113 123 VCLCEYTDHGHCGILDDGG-YVDNDETLEILAKQAVSQAEAGADIVA 168 (330)
T ss_pred ecccCCcCCCccccccCCC-eecchHHHHHHHHHHHHHHHcCCCeec
Confidence 2 223456666665 5667888888887765443 3555764
No 112
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=24.77 E-value=2.4e+02 Score=27.38 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=32.2
Q ss_pred CCcEEEEeCCCC-----------Cc-hHHHHHHHhh---cCCccccccccccCCCCCC-CCCCCCcHHHHHHHHHHH
Q 012505 134 EGFHIVVDAGNG-----------AG-GFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAV 194 (462)
Q Consensus 134 ~~~kvvvd~~~G-----------~~-~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v 194 (462)
.++.|++|+.|+ ++ +.+++.+.+. .|++-+ .+..+|||.--- ..|+-...+.++.+.+.+
T Consensus 190 t~lPVi~DpSHsvq~p~~~g~~s~G~re~v~~larAAvA~GaDGl-~iEvHpdP~~AlsDg~q~l~~~~~~~l~~~l 265 (281)
T PRK12457 190 GDLPVIFDVTHSLQCRDPLGAASGGRRRQVLDLARAGMAVGLAGL-FLEAHPDPDRARCDGPSALPLDQLEPFLSQV 265 (281)
T ss_pred CCCCEEEeCCccccCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEE-EEEecCCccccCCCcccccCHHHHHHHHHHH
Confidence 378999999996 22 3356655543 577743 233445444322 334444444455544433
No 113
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=24.69 E-value=1.4e+02 Score=23.79 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=26.0
Q ss_pred CeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHH
Q 012505 407 GGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAA 442 (462)
Q Consensus 407 ~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~ 442 (462)
.||+--+++| -+.|++|+++.+ .+++.+++.+
T Consensus 33 ~G~V~N~~DG---sVeiva~G~~~~-v~~~~~~l~~ 64 (92)
T COG1254 33 TGWVKNLDDG---SVEIVAEGPDEA-VEKFIEWLRK 64 (92)
T ss_pred EEEEEECCCC---eEEEEEEcCHHH-HHHHHHHHHh
Confidence 4888888888 588999999987 7877777763
No 114
>PRK07738 flagellar protein FlaG; Provisional
Probab=24.55 E-value=3.1e+02 Score=22.86 Aligned_cols=51 Identities=14% Similarity=0.297 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012505 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (462)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~Ll~~~ 234 (462)
..+++.+-+.+...+-++=|.+|.+.+|+.+ +|. +| +-+.+++++.|+..+
T Consensus 49 ~~aveklN~~l~~~~~~L~F~vdeet~~~vVkVvD~~T~EVIRQIPpEe~L~l~~~m 105 (117)
T PRK07738 49 EEVVDGMNELLEPSQTSLKFELHEKLNEYYVQVVDERTNEVIREIPPKKLLDMYAAM 105 (117)
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCeeeeeCCCHHHHHHHHHH
Confidence 3556667777788889999999999999976 564 56 567788888887765
No 115
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=23.97 E-value=2.4e+02 Score=27.11 Aligned_cols=61 Identities=16% Similarity=0.185 Sum_probs=32.5
Q ss_pred CCcEEEEeCCCC-----------Cc-hHHHHHHHhh---cCCccccccccccCCCCCC-CCCCCCcHHHHHHHHHHHH
Q 012505 134 EGFHIVVDAGNG-----------AG-GFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 134 ~~~kvvvd~~~G-----------~~-~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~ 195 (462)
..+.|++|+.|+ ++ +.+++.+.+. .|++-+ .+..+|||.--- ..|+-..++.++.+.+.++
T Consensus 182 ~~lPVi~DpSHsvq~pg~~~~~s~G~r~~v~~la~AAvA~GadGl-~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l~ 258 (264)
T PRK05198 182 TGAPVIFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGL-FIETHPDPDNALSDGPNMLPLDKLEPLLEQLK 258 (264)
T ss_pred CCCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEE-EEEeCCCccccCCCccccCCHHHHHHHHHHHH
Confidence 348999999996 33 3355555533 577743 233445544422 3344444455555544443
No 116
>PF14028 SpaB_C: SpaB C-terminal domain
Probab=23.93 E-value=1.1e+02 Score=29.44 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=22.1
Q ss_pred CeEEEEeecCCCceeEEEEeeCCHH
Q 012505 407 GGWFLLRLSLHDPVLPLNIEAPSRE 431 (462)
Q Consensus 407 ~~wvliRpSgTEP~irvy~Ea~~~~ 431 (462)
+.|++||=...+|-+|+++...+.+
T Consensus 37 ~~wFFiRY~d~gpHLRLR~~~~~~~ 61 (283)
T PF14028_consen 37 DRWFFIRYWDPGPHLRLRFRGSPDA 61 (283)
T ss_pred cceEEEecCCCCCeEEEEEECCCcc
Confidence 5799999999999999999887644
No 117
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=23.70 E-value=2.3e+02 Score=25.53 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=39.2
Q ss_pred EEEEeCCCCCc-------------------hHHHHHHHhhcCCccccccccccCCCCCC---CCCCCCcHHHHHHHHHHH
Q 012505 137 HIVVDAGNGAG-------------------GFFAAKVLEPLGAKTSGSQFLEPDGMFPN---HIPNPEDKTAMKAIIQAV 194 (462)
Q Consensus 137 kvvvd~~~G~~-------------------~~~~~~ll~~lg~~v~~~~~~~~d~~f~~---~~p~P~~~~~l~~l~~~v 194 (462)
.|++|++||-. +..+...|++.|++|+- . -..|..... ..........|.+-.+.+
T Consensus 2 ~I~iDpGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~~V~l-t-r~~d~~~~~~~~~~~~~~~~~~L~~R~~~A 79 (189)
T TIGR02883 2 IIVIDPGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGALVVM-T-REDDSDLASEGTKGYSRRKIEDLRKRVKLI 79 (189)
T ss_pred EEEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEE-E-ecCCcCccccccccccccccCCHHHHHHHH
Confidence 57888888721 12355668888988751 1 122222100 000001112255556777
Q ss_pred HhcCCcEEEeeCCCC
Q 012505 195 LDNKADLGIIFDTDV 209 (462)
Q Consensus 195 ~~~~adlgia~D~Dg 209 (462)
.+.++|+-|.+=.|+
T Consensus 80 n~~~adlfiSiH~Na 94 (189)
T TIGR02883 80 NESEADLFISIHLNA 94 (189)
T ss_pred HhcCCCEEEEEecCC
Confidence 888999999887776
No 118
>PRK08868 flagellar protein FlaG; Provisional
Probab=23.14 E-value=3.3e+02 Score=23.59 Aligned_cols=52 Identities=13% Similarity=0.303 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--Ec-CCC---ccccchhHHHHHHHHH
Q 012505 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VD-STG---HELNRNRLIALMSAIV 235 (462)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd-~~G---~~l~~d~~~~Ll~~~~ 235 (462)
..+++.+.+.+...+-+|-|.+|.|.+|+.+ +| ++| |-|.+++++.|...+-
T Consensus 74 ~~aVeklNe~~~~~n~~L~F~vdeetgr~VVkViD~~T~EVIRQIP~Ee~L~la~~l~ 131 (144)
T PRK08868 74 EKMVEQMNEFVKSINKGLSFRVDEESGRDVVTIYEASTGDIIRQIPDEEMLEVLRRLA 131 (144)
T ss_pred HHHHHHHHHHHHhhcCceEEEEecCCCCEEEEEEECCCCceeeeCCCHHHHHHHHHHH
Confidence 3566777888888899999999999999976 45 456 5677888888887653
No 119
>PRK14644 hypothetical protein; Provisional
Probab=23.10 E-value=2e+02 Score=24.67 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=28.3
Q ss_pred EeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 412 LRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 412 iRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
+...+-.+.+|||++..+.+.++++.+.+..++..
T Consensus 20 ~~~~~~~~~LrV~Idk~~iddC~~vSr~is~~LD~ 54 (136)
T PRK14644 20 IVKEDGDLFLEVILNSRDLKDIEELTKEISDFIDN 54 (136)
T ss_pred EEeCCCCEEEEEEECCCCHHHHHHHHHHHHHHhcc
Confidence 44666677889999988999999988888887764
No 120
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=22.93 E-value=2.6e+02 Score=26.80 Aligned_cols=59 Identities=17% Similarity=0.268 Sum_probs=31.9
Q ss_pred CcEEEEeCCCC-----------Cc-hHHHHHHHh---hcCCccccccccccCCCCCC-CCCCCCcHHHHHHHHHHH
Q 012505 135 GFHIVVDAGNG-----------AG-GFFAAKVLE---PLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAV 194 (462)
Q Consensus 135 ~~kvvvd~~~G-----------~~-~~~~~~ll~---~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v 194 (462)
++.|++|+.|+ ++ +.+++.+.+ ..|++-. .+...|||.--- ..|+-..++.++.+.+.+
T Consensus 175 ~~PVi~DpSHsvq~pg~~g~~s~G~r~~v~~la~AAvA~GaDGl-~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l 249 (258)
T TIGR01362 175 GCPVIFDATHSVQQPGGLGGASGGLREFVPTLARAAVAVGIDGL-FMETHPDPKNAKSDGPNMLPLSELEGLLEKL 249 (258)
T ss_pred CCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCEE-EEEeCCCccccCCCccccCCHHHHHHHHHHH
Confidence 68999999996 33 335666554 3577743 233444444322 334444444455544443
No 121
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=22.92 E-value=1.3e+02 Score=26.93 Aligned_cols=21 Identities=29% Similarity=0.340 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+.+-|...|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (171)
T PRK08622 14 EKMAVSDYLKSKGHEVIDVGT 34 (171)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 122
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.68 E-value=88 Score=26.58 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCcEEEeCCCChhh
Q 012505 3 QDAVSRGITGAGLDVVQYGLASTPA 27 (462)
Q Consensus 3 ~~a~a~gL~s~Gi~V~~~g~~ptP~ 27 (462)
|+-++..|.++|++|+++|.-.+|.
T Consensus 19 ~~iv~~~l~~~GfeVi~lg~~~s~e 43 (132)
T TIGR00640 19 AKVIATAYADLGFDVDVGPLFQTPE 43 (132)
T ss_pred HHHHHHHHHhCCcEEEECCCCCCHH
Confidence 4567778999999999997655554
No 123
>PRK13324 pantothenate kinase; Reviewed
Probab=22.18 E-value=6.9e+02 Score=23.83 Aligned_cols=109 Identities=13% Similarity=-0.036 Sum_probs=60.0
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHH-HHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHH
Q 012505 110 YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFA-AKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMK 188 (462)
Q Consensus 110 ~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~-~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~ 188 (462)
..++|...+.+.+...-.. ....=.|++.+.--.....+ ..+.+.+++++. .+.... ..+..+.++|+.-. .+
T Consensus 36 t~de~~~~l~~~~~~~~~~---~~~i~~viisSVvP~l~~~l~~~~~~~~~~~~~-~v~~~~-~~l~~~y~~p~~lG-~D 109 (258)
T PRK13324 36 TSDQMGVFLRQALRENSVD---LGKIDGCGISSVVPHLNYSLGSAVIKYFNIKPF-FISMDT-TDLDMSAVEAHQVG-AD 109 (258)
T ss_pred chHHHHHHHHHHHHhcCCC---ccCCCeEEEEeCcchhHHHHHHHHHHHhCCCeE-EEecCC-ccceeecCChhhcc-HH
Confidence 3456777777776432110 00112466766654444444 444566788765 343333 33555677777632 13
Q ss_pred HHHHHHH---hc-CCcEEEeeCCCCceeEEEcCCCccccc
Q 012505 189 AIIQAVL---DN-KADLGIIFDTDVDRSAAVDSTGHELNR 224 (462)
Q Consensus 189 ~l~~~v~---~~-~adlgia~D~DgDR~~~vd~~G~~l~~ 224 (462)
.....+- .. +.++.++-=|-|=.+-++|.+|+++.|
T Consensus 110 R~~~~vaA~~~~~~~~~iViD~GTA~T~d~v~~~g~~~GG 149 (258)
T PRK13324 110 RIASCISAIADHPNKDLLIIDLGTATTFDLVTKDKKYLSG 149 (258)
T ss_pred HHHHHHHHHHhcCCCCEEEEEcCCceEEEEEcCCCeEEEE
Confidence 3333332 23 446777766788888889988876644
No 124
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=21.85 E-value=1.4e+02 Score=26.76 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (171)
T PRK12615 14 EKMAVSDFLKSKGYDVIDCGT 34 (171)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999985
No 125
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=21.59 E-value=2.7e+02 Score=27.01 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=32.3
Q ss_pred CCcEEEEeCCCC----------------C-chHHHHHHHhh---cCCccccccccccCCCCCC-CCCCCCcHHHHHHHHH
Q 012505 134 EGFHIVVDAGNG----------------A-GGFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQ 192 (462)
Q Consensus 134 ~~~kvvvd~~~G----------------~-~~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~ 192 (462)
.++.|++|+.|+ + -+.+++.+.+. .|++-+ .+...|||.--- ..|+-..++.++.+.+
T Consensus 188 ~~lPVI~DpSHsvQ~pg~~~~~~~g~~s~G~Re~V~~larAAvA~GaDGl-fiEvHpdP~~AlsDg~q~l~~~~l~~ll~ 266 (290)
T PLN03033 188 ANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGI-FMEVHDDPLSAPVDGPTQWPLRHLEELLE 266 (290)
T ss_pred cCCCEEEeCCccccCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCEE-EEEecCCccccCCCcccCcCHHHHHHHHH
Confidence 578999999996 2 23466666544 577743 233445554422 3344444444544433
Q ss_pred H
Q 012505 193 A 193 (462)
Q Consensus 193 ~ 193 (462)
.
T Consensus 267 ~ 267 (290)
T PLN03033 267 E 267 (290)
T ss_pred H
Confidence 3
No 126
>PRK09273 hypothetical protein; Provisional
Probab=21.28 E-value=6.6e+02 Score=23.27 Aligned_cols=103 Identities=9% Similarity=-0.079 Sum_probs=53.2
Q ss_pred HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHH
Q 012505 149 FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLI 228 (462)
Q Consensus 149 ~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~ 228 (462)
..+...|+..|.+|+. +.+..+ ..+...-+..-..+.+.+.+..+|+||...|-| ++
T Consensus 20 ~~L~~~L~~~G~eV~D-~G~~~~-----~~~s~dYpd~a~~vA~~V~~g~~d~GIliCGTG-----------------iG 76 (211)
T PRK09273 20 EALKKVADPKGHEVFN-YGMYDE-----EDHQLTYVQNGIMASILLNSKAVDFVVTGCGTG-----------------QG 76 (211)
T ss_pred HHHHHHHHHCCCEEEE-eCCCCC-----CCCCCChHHHHHHHHHHHHcCCCCEEEEEcCcH-----------------HH
Confidence 3556667888888762 222111 000011123234556666666666666655544 22
Q ss_pred HHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEec--chHHHHHH
Q 012505 229 ALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKR--GYKNVIDE 279 (462)
Q Consensus 229 ~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~--G~k~i~~~ 279 (462)
+.++. - +-++|.+-.++.+.......+.+++.++.-+- ||.|+.+.
T Consensus 77 ~siAA---N--K~pGIraalc~d~~sA~lar~hNnaNVL~Lg~r~~~g~~g~~ 124 (211)
T PRK09273 77 AMLAL---N--SFPGVVCGYCIDPTDAYLFAQINNGNALSLPFAKGFGWGAEL 124 (211)
T ss_pred HHHHH---h--cCCCeEEEEeCCHHHHHHHHHhcCCcEEEEcCCcCCCcccHH
Confidence 22222 1 23346666666666666666777888877553 34355553
No 127
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=21.24 E-value=1.8e+02 Score=26.88 Aligned_cols=31 Identities=13% Similarity=0.370 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCCcEEEeC-CCChhhhhhhhc
Q 012505 3 QDAVSRGITGAGLDVVQYG-LASTPAMFNSTL 33 (462)
Q Consensus 3 ~~a~a~gL~s~Gi~V~~~g-~~ptP~~~~a~~ 33 (462)
++-++..|.+.|++|+++| .+|..-+--++.
T Consensus 105 ~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~ 136 (213)
T cd02069 105 KNLVGVILSNNGYEVIDLGVMVPIEKILEAAK 136 (213)
T ss_pred HHHHHHHHHhCCCEEEECCCCCCHHHHHHHHH
Confidence 3567778999999999998 577777655554
No 128
>TIGR01006 polys_exp_MPA1 polysaccharide export protein, MPA1 family, Gram-positive type. This family contains members from Low GC Gram-positive bacteria; they are proposed to have a function in the export of complex polysaccharides.
Probab=21.12 E-value=1.9e+02 Score=26.71 Aligned_cols=35 Identities=9% Similarity=0.221 Sum_probs=28.3
Q ss_pred EEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012505 410 FLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 444 (462)
Q Consensus 410 vliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i 444 (462)
+-+.+.....+++|.+++.|+++|.++++.+.+..
T Consensus 110 i~v~~~~~t~ii~Isv~~~dp~~A~~ian~~~~~~ 144 (226)
T TIGR01006 110 VTVTNPTDTRLISISVKDKTPQDASKIANSLREVA 144 (226)
T ss_pred eEEeCCCCcEEEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 55556666799999999999999999988776643
No 129
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=21.11 E-value=1.3e+02 Score=21.22 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=24.2
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCCCh
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPALDT 452 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~~~ 452 (462)
|.++|.+ ++.|.+.-++|++.+.+.+.+.+..+.
T Consensus 1 P~I~i~~~~g~~~e~K~~l~~~it~~~~~~lg~~~ 35 (60)
T PF01361_consen 1 PFITIKIPEGRTAEQKRELAEAITDAVVEVLGIPP 35 (60)
T ss_dssp -EEEEEEESTS-HHHHHHHHHHHHHHHHHHHTS-G
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCC
Confidence 6777775 567899999999999988877665543
No 130
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=21.08 E-value=79 Score=19.95 Aligned_cols=18 Identities=22% Similarity=-0.027 Sum_probs=15.2
Q ss_pred EEEeeCCCCceeEEEcCC
Q 012505 201 LGIIFDTDVDRSAAVDST 218 (462)
Q Consensus 201 lgia~D~DgDR~~~vd~~ 218 (462)
-|+++|++++|+...|-.
T Consensus 12 ~~la~d~~~~~lYw~D~~ 29 (43)
T smart00135 12 NGLAVDWIEGRLYWTDWG 29 (43)
T ss_pred CEEEEeecCCEEEEEeCC
Confidence 479999999999988754
No 131
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=20.79 E-value=2.2e+02 Score=22.92 Aligned_cols=50 Identities=18% Similarity=0.328 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CCc---cccchhHHHHHHHH
Q 012505 185 TAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TGH---ELNRNRLIALMSAI 234 (462)
Q Consensus 185 ~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G~---~l~~d~~~~Ll~~~ 234 (462)
.+++.+.+.+...+..|-|.+|.|.+|+.+ +|. +|+ -|.+++++.|...+
T Consensus 41 ~~v~~ln~~~~~~~~~l~F~vde~~~~~vVkViD~~T~eVIRqIP~Ee~l~l~~~l 96 (107)
T PF03646_consen 41 EAVEKLNEFLQALNTSLRFSVDEESGRVVVKVIDKETGEVIRQIPPEELLDLAKRL 96 (107)
T ss_dssp HHHHHHHHHHTTSS--EEEEEEEETTEEEEEEEETTT-SEEEEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCCcHHHHHHHHHH
Confidence 455666777777889999999999999866 464 574 57778888887654
No 132
>COG1671 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.63 E-value=1.3e+02 Score=26.14 Aligned_cols=28 Identities=29% Similarity=0.192 Sum_probs=19.9
Q ss_pred cEEEEeCCCCCchHHHHHHHhhcCCccc
Q 012505 136 FHIVVDAGNGAGGFFAAKVLEPLGAKTS 163 (462)
Q Consensus 136 ~kvvvd~~~G~~~~~~~~ll~~lg~~v~ 163 (462)
.+|.||+--=.....+-++.++.|+.++
T Consensus 2 ~~I~VDADACPVk~~i~r~A~r~~~~v~ 29 (150)
T COG1671 2 MTIWVDADACPVKDEIYRVAERMGLKVT 29 (150)
T ss_pred ceEEEeCCCCchHHHHHHHHHHhCCeEE
Confidence 3677776544466677777889999875
No 133
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=20.18 E-value=2.5e+02 Score=24.57 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=29.3
Q ss_pred CCCceeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHH
Q 012505 207 TDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFI 258 (462)
Q Consensus 207 ~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~i 258 (462)
+.++.+.+.|++|+.++..++...+..+.... .+.++...--+..+.+.+
T Consensus 65 ~~~~~~i~Ld~~Gk~~sS~~fA~~l~~~~~~g--~~~i~F~IGG~~G~~~~~ 114 (155)
T PF02590_consen 65 PPNDYVILLDERGKQLSSEEFAKKLERWMNQG--KSDIVFIIGGADGLSEEV 114 (155)
T ss_dssp HTTSEEEEE-TTSEE--HHHHHHHHHHHHHTT--S-EEEEEE-BTTB--HHH
T ss_pred cCCCEEEEEcCCCccCChHHHHHHHHHHHhcC--CceEEEEEecCCCCCHHH
Confidence 56778888999999999999999998876542 223443333344444433
Done!