Query 012505
Match_columns 462
No_of_seqs 147 out of 1435
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 10:45:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7l_A 455AA long hypothetical 100.0 4.3E-81 1.5E-85 646.0 39.0 398 1-446 52-454 (455)
2 3uw2_A Phosphoglucomutase/phos 100.0 5.7E-81 1.9E-85 645.9 39.2 400 1-449 77-479 (485)
3 1wqa_A Phospho-sugar mutase; a 100.0 3.3E-81 1.1E-85 646.9 35.7 399 1-448 56-454 (455)
4 1p5d_X PMM, phosphomannomutase 100.0 9.9E-80 3.4E-84 637.2 39.5 394 1-449 63-457 (463)
5 1tuo_A Putative phosphomannomu 100.0 2.7E-79 9.1E-84 633.3 31.2 394 1-445 63-463 (464)
6 3pdk_A Phosphoglucosamine muta 100.0 2.7E-77 9.2E-82 617.2 34.2 385 1-448 76-466 (469)
7 3i3w_A Phosphoglucosamine muta 100.0 3.5E-77 1.2E-81 613.1 33.7 385 1-447 56-441 (443)
8 3na5_A Phosphoglucomutase; iso 100.0 1.1E-76 3.7E-81 625.2 30.0 415 2-449 118-568 (570)
9 4hjh_A Phosphomannomutase; str 100.0 1.5E-74 5.3E-79 600.2 34.7 393 1-446 64-473 (481)
10 3pmg_A Alpha-D-glucose-1,6-bis 100.0 3.8E-74 1.3E-78 605.4 25.5 428 1-460 68-553 (561)
11 2z0f_A Putative phosphoglucomu 100.0 9.9E-74 3.4E-78 600.9 26.9 409 1-448 77-523 (524)
12 1kfi_A Phosphoglucomutase 1; p 100.0 2.3E-72 7.9E-77 595.1 26.1 427 1-459 73-563 (572)
13 2dka_A Phosphoacetylglucosamin 100.0 2.4E-61 8.3E-66 507.6 16.5 373 40-445 53-544 (544)
14 1wjw_A Phosphoacetylglucosamin 99.5 4.9E-16 1.7E-20 128.0 -1.9 94 338-449 4-98 (112)
15 2dka_A Phosphoacetylglucosamin 74.4 1.3 4.6E-05 45.8 2.5 32 2-33 148-180 (544)
16 2vvr_A Ribose-5-phosphate isom 67.5 17 0.00058 30.5 7.3 65 136-209 2-69 (149)
17 3brc_A Conserved protein of un 66.9 21 0.00071 29.5 7.4 82 137-224 38-124 (156)
18 3ph3_A Ribose-5-phosphate isom 65.7 12 0.0004 32.1 6.0 67 134-209 19-88 (169)
19 3he8_A Ribose-5-phosphate isom 64.3 13 0.00046 31.1 6.0 65 136-209 1-68 (149)
20 3qay_A Endolysin; amidase A/B 63.3 19 0.00065 31.1 7.2 66 136-209 2-88 (180)
21 2ppw_A Conserved domain protei 54.8 40 0.0014 30.0 7.7 110 135-271 3-118 (216)
22 3k7p_A Ribose 5-phosphate isom 52.5 30 0.001 29.8 6.3 65 136-209 23-92 (179)
23 3s5p_A Ribose 5-phosphate isom 49.9 14 0.00048 31.5 3.8 67 135-209 21-89 (166)
24 1o1x_A Ribose-5-phosphate isom 45.2 72 0.0025 26.8 7.4 68 134-209 11-80 (155)
25 3sgw_A Ribose 5-phosphate isom 43.2 40 0.0014 29.2 5.7 69 134-209 28-100 (184)
26 2jpi_A Hypothetical protein; a 41.8 76 0.0026 25.3 6.9 70 373-448 35-104 (118)
27 3ne8_A N-acetylmuramoyl-L-alan 41.8 50 0.0017 29.8 6.6 63 134-209 3-85 (234)
28 2vvp_A Ribose-5-phosphate isom 40.4 42 0.0015 28.4 5.3 67 136-209 4-72 (162)
29 1zco_A 2-dehydro-3-deoxyphosph 39.8 45 0.0016 30.6 6.0 60 135-196 192-257 (262)
30 1o1x_A Ribose-5-phosphate isom 39.7 53 0.0018 27.6 5.7 23 2-24 26-48 (155)
31 3sz8_A 2-dehydro-3-deoxyphosph 39.2 36 0.0012 31.8 5.2 59 135-195 195-270 (285)
32 3he8_A Ribose-5-phosphate isom 37.1 41 0.0014 28.1 4.7 23 2-24 14-36 (149)
33 2yh5_A DAPX protein, BAMC; lip 35.5 11 0.00039 30.6 1.0 95 135-232 14-111 (127)
34 2vvr_A Ribose-5-phosphate isom 35.3 47 0.0016 27.8 4.8 23 2-24 15-37 (149)
35 3ulb_A Target of rapamycin com 34.8 41 0.0014 26.9 4.1 46 401-447 67-116 (121)
36 3ph3_A Ribose-5-phosphate isom 34.8 46 0.0016 28.4 4.7 23 2-24 34-56 (169)
37 3ono_A Ribose/galactose isomer 33.7 1.3E+02 0.0045 26.6 7.6 108 135-270 3-116 (214)
38 3m20_A 4-oxalocrotonate tautom 32.3 33 0.0011 23.5 2.9 32 419-450 1-32 (62)
39 3s5p_A Ribose 5-phosphate isom 32.2 55 0.0019 27.8 4.7 23 2-24 35-57 (166)
40 4em8_A Ribose 5-phosphate isom 30.6 82 0.0028 26.2 5.5 22 2-23 21-42 (148)
41 2vvp_A Ribose-5-phosphate isom 30.1 79 0.0027 26.8 5.4 21 2-22 17-37 (162)
42 1jwq_A N-acetylmuramoyl-L-alan 28.4 85 0.0029 26.9 5.5 23 187-209 61-83 (179)
43 1otf_A 4-oxalocrotonate tautom 27.7 51 0.0018 22.1 3.3 32 419-450 1-33 (62)
44 2nwr_A 2-dehydro-3-deoxyphosph 26.4 71 0.0024 29.4 4.9 57 137-195 178-251 (267)
45 3ry0_A Putative tautomerase; o 24.9 68 0.0023 22.0 3.5 33 419-451 1-34 (65)
46 2opa_A Probable tautomerase YW 24.4 64 0.0022 21.5 3.3 32 419-450 1-33 (61)
47 3czx_A Putative N-acetylmuramo 23.7 1.6E+02 0.0053 25.2 6.4 59 136-209 4-81 (182)
48 1vs1_A 3-deoxy-7-phosphoheptul 23.5 42 0.0014 31.2 2.7 60 135-196 207-272 (276)
49 2qn6_B Translation initiation 22.8 1.1E+02 0.0036 23.3 4.4 29 418-446 51-79 (93)
50 2hc5_A ORF 99, hypothetical pr 22.0 1.5E+02 0.0052 23.5 5.4 51 184-234 41-97 (117)
51 2ppw_A Conserved domain protei 21.6 67 0.0023 28.6 3.5 22 2-23 21-42 (216)
52 3ej9_A Alpha-subunit of trans- 21.4 76 0.0026 22.7 3.3 33 419-451 2-35 (76)
53 3c5y_A Ribose/galactose isomer 20.6 69 0.0023 28.8 3.3 23 1-23 36-58 (231)
No 1
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.3e-81 Score=646.04 Aligned_cols=398 Identities=23% Similarity=0.295 Sum_probs=335.8
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++|++||||||||||++|||||||+++|.++.++.++.|+
T Consensus 52 ~~~~a~a~gl~~~G~~V~~~g~~pTP~~~~av~------~~~~~~GImITASHNP~~~NGiK~~~~~G~~~~~~~~~~I~ 125 (455)
T 2f7l_A 52 MLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVK------TLGYDGGVVITASHNPAPYNGIKVVDKDGIEIRREKENEIE 125 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HHCCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEcCCCCcHHHHHHHH------hcCCCeEEEEEcCCCChHHCEEEEECCCCCCCCHHHHHHHH
Confidence 589999999999999999999999999999998 57899999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCc-ceE-EEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012505 81 RAADIYKQFMVEGLTNLEKQTST-SIK-RVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~i~-~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~l 158 (462)
+.... +.+.+.. ....+ .+. ..+..+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++|
T Consensus 126 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~~~Y~~~l~~~~~~~~----i~~~~lkivvd~~~G~~~~~~~~~l~~l 195 (455)
T 2f7l_A 126 DLFFT-ERFNTIE-----WSSLTTEVKREDRVISTYVNGILSHVDIEK----IKKKNYKVLIDPANSVGALSTPLVARAL 195 (455)
T ss_dssp HHHHH-TCCCCCC-----GGGCCCCCEECCCHHHHHHHHHHTTSCHHH----HHHHCCEEEEECTTTGGGGTHHHHHHHT
T ss_pred HHHhc-CCCCcCc-----hhcCCceeecccchHHHHHHHHHhhcChhh----cccCCCEEEEECCCchHHHHHHHHHHHc
Confidence 65422 1111110 01123 443 23688999999987664221 1235899999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012505 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (462)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~ 238 (462)
||+++ .+|+.|||.||+++|||+. ++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|++++++++
T Consensus 196 G~~v~-~~~~~pDg~F~~~~p~p~~-~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~g~~l~gd~i~~lla~~l~~~ 273 (455)
T 2f7l_A 196 GCKIY-TINGNLDPLFSARQPEPTF-DSLKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVK 273 (455)
T ss_dssp TCEEE-EBSCSCCTTCTTSCSSCCT-TTSHHHHHHHHHTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHT
T ss_pred CCEEE-EECCcCCCCCCCCCcCcch-HHHHHHHHHHHHcCCCEEEEECCCCCeEEEEcCCCeEEChHHHHHHHHHHHHHh
Confidence 99998 6899999999999999996 679999999999999999999999999999999999999999999999999987
Q ss_pred C--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHH
Q 012505 239 H--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (462)
Q Consensus 239 ~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (462)
+ ++..||.+.+||. +++.+++++|+++++|+||||||+++|.+.+ ++||||+|||++|+++.+.+||+++++
T Consensus 274 ~~~~~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~~G~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l 347 (455)
T 2f7l_A 274 NPKAIKKIVTAVSSSS-LVEEYLSKYNIQVDWTKVGSVDIAHKVADEN-----ALAGFEENGGFMYPPHQYVRDGAMSFA 347 (455)
T ss_dssp CTTSCSEEEEETTSCT-HHHHHHHTTTCEEEEECSCHHHHHHHHHHTT-----CSEEEETTEEEEBTTTBSSCCHHHHHH
T ss_pred CccCCCeEEEEecccH-HHHHHHHHcCCEEEEEcCcHHHHHHHHHhcC-----cEEEEcCcCcEEECCcCCCCCHHHHHH
Confidence 6 4567887766666 6667888899999999999999999998865 469999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhH-HHHHHHHhhhcCCCCCCCCCc
Q 012505 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGE-AVLKHLENRVDSDPKLQKAPV 395 (462)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~v~~~l~~~~~~~~~~~~~~~ 395 (462)
+++++|+..+ ++|+|+++++|.++.. +.++. |++ ..+. ++|+++++..... + ..+.
T Consensus 348 ~~le~~a~~g--------~~L~ell~~~~~~~~~---~~~v~--~~~-------~~~~~~~~~~l~~~~~~~-~--~~~~ 404 (455)
T 2f7l_A 348 LMLELLANEN--------VSSAELFDRLPKYYLV---KTKVD--LKP-------GLMVEEIYKKILEVYSTS-S--VKAI 404 (455)
T ss_dssp HHHHHHHHHT--------CCHHHHHHTSCCCEEE---EEEEE--CCT-------TCCHHHHHHHHHHHHCCT-T--SEEE
T ss_pred HHHHHHHhhC--------CCHHHHHHhCCCCeee---eEeEE--cCc-------HHHHHHHHHHHHHhchhc-c--cccc
Confidence 9999887543 4699999999986432 34555 766 2344 8999998754321 1 2355
Q ss_pred cccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 396 NYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 396 ~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
.+|| ||+.+++||++||||||||++|||+|+.+++.++++++.+.++|++
T Consensus 405 ~~DG-lr~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~~i~~ 454 (455)
T 2f7l_A 405 TIDG-VKIIGKDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKKIVEG 454 (455)
T ss_dssp CSSS-EEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cCce-EEEEeCCcEEEEeeCCCCcEEEEEEEECCHHHHHHHHHHHHHHHhc
Confidence 6899 9999988999999999999999999999999999999999998864
No 2
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=5.7e-81 Score=645.92 Aligned_cols=400 Identities=28% Similarity=0.397 Sum_probs=333.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhccc--CCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTE--GDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDI 78 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~--~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ 78 (462)
||++++++||+++|++|+++|.+|||+++|+++.. +...++++++||||||||||++||||||++ +|.++.++..+.
T Consensus 77 ~~~~a~a~gl~a~Gi~V~~~g~~pTP~l~~av~~~~~~~~~~~~~~~GImITASHNP~~~NGiK~~~-~G~~i~~~~~~~ 155 (485)
T 3uw2_A 77 ELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVL-RGAAIYGDQIQG 155 (485)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHTTSCEEETTEEECCCCEEEECCTTSCTTEEEEEEEE-TTEECCTHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHhccccccccccCCCeEEEEEeCCCCcccceEEEec-CCCCCCHHHHHH
Confidence 58999999999999999999999999999999710 000035789999999999999999999998 677776665555
Q ss_pred HHHHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012505 79 LERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (462)
Q Consensus 79 ie~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~l 158 (462)
|++... ..++ .+ ..+.+...+..+.|++++.+.++. .+++|||+||+||+++.+++++|++|
T Consensus 156 I~~~~~------~~~~---~~-~~g~~~~~d~~~~Yi~~l~~~i~~--------~~~lkIvvD~~~Ga~~~~~~~il~~l 217 (485)
T 3uw2_A 156 LYKRIV------DARF---ET-GSGSYEQYDVADQYVERIVGDIKL--------TRPLKLVVDAGNGVAGPLATRLFKAL 217 (485)
T ss_dssp HHHHHH------TTCC---CC-CCCCEEECCCHHHHHHHHHTTCCC--------SSCCCEEEECTTSTHHHHHHHHHHHT
T ss_pred HHHHHh------cCCc---cc-CCceEEecchHHHHHHHHHHhcCc--------ccCCEEEEEcCCCcHHHHHHHHHHHc
Confidence 555332 1111 12 246667778999999998876531 25799999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012505 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (462)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~ 238 (462)
||+++ .+|+.|||.||++.|||+.+++|+.+.+.|++.++|+|+++||||||++++|++|+++++|++++|++++++++
T Consensus 218 G~~v~-~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~~ 296 (485)
T 3uw2_A 218 GCELV-ELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSR 296 (485)
T ss_dssp TCCEE-EESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHHH
T ss_pred CCeEE-EecCccCCCCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHHh
Confidence 99998 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcc-cCcHHHHHHH
Q 012505 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHW-LDDGAYLMVK 317 (462)
Q Consensus 239 ~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~-~~Dgi~aa~~ 317 (462)
+++..||.+++||..+.+.+ +++|+++++||||||||+++|++.++ .||||+|||++|+++++ ++||++++++
T Consensus 297 ~~~~~vv~~v~ss~~l~~~~-~~~g~~~~~t~vG~k~i~~~m~~~~~-----~~ggE~SG~~~f~~~~~~~~Dgi~aal~ 370 (485)
T 3uw2_A 297 NPGAQIIYDVKCTRNLARWV-REKGGEPLMWKTGHSLVKAKLRETGA-----PLAGEMSGHVFFKDRWYGFDDGLYTGAR 370 (485)
T ss_dssp STTCEEEEETTSCTHHHHHH-HHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSCEEETTTTCSSBCHHHHHHH
T ss_pred CCCCeEEEEeCCcHHHHHHH-HHcCCEEEEEcCChHHHHHHHHhhcc-----cceecccCcEeeccccCCCCcHHHHHHH
Confidence 88878888877888676655 56799999999999999999998874 59999999999998654 6899999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (462)
++++|+... +|++++++||+++.+.+++ +. |+| +.+.++|++|.+... ..+ ..++..+
T Consensus 371 lle~la~~~---------~lsel~~~lp~~~~~~~~~--v~--~~~-------~~~~~~~~~l~~~~~-~~~-~~~~~~~ 428 (485)
T 3uw2_A 371 LLEILARVA---------DPSALLNGLPNAVSTPELQ--LK--LEE-------GENVKLIDKLRADAK-FDG-ADEVVTI 428 (485)
T ss_dssp HHHHHTTSS---------CHHHHHHTSCCCEECCCEE--C---------------CTHHHHHHHHSCC-CTT-CSEEECS
T ss_pred HHHHHHhcC---------CHHHHHHHhhHhhCCceEE--Ee--CCc-------hhHHHHHHHHHhhhc-ccc-ccccccc
Confidence 999886531 3999999999986554443 44 666 335689999987432 111 1245678
Q ss_pred cceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 398 EGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 398 dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
|| ||+.+++||+|||||||||++|||+||.|++.++++++.+.++|+++..
T Consensus 429 DG-vrv~~~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~~i~~~~~ 479 (485)
T 3uw2_A 429 DG-LRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAAKP 479 (485)
T ss_dssp SS-EEEEETTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHST
T ss_pred ce-EEEEeCCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHHHHHHhcc
Confidence 99 9999999999999999999999999999999999999999999998654
No 3
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.3e-81 Score=646.95 Aligned_cols=399 Identities=28% Similarity=0.358 Sum_probs=339.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++++|.+++++.++.|+
T Consensus 56 ~l~~a~~~gl~~~G~~V~~~g~~pTP~l~~~v~------~~~~~~GimITASHNP~~~NGiK~~~~~G~~~~~~~~~~Ie 129 (455)
T 1wqa_A 56 MLKEALISGLLSVGCDVIDVGIAPTPAVQWATK------HFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVE 129 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCChHHHHHHHH------hcCCCEEEEEEeCCCChHHCeEEEEcCCCCcCCHHHHHHHH
Confidence 589999999999999999999999999999998 67899999999999999999999999999999888777777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~ 160 (462)
+.... +.+.+.. ....+.+...+..+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++|||
T Consensus 130 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~Y~~~l~~~~~~~~----~~~~~lkivvd~~nG~~~~~~~~~l~~lG~ 199 (455)
T 1wqa_A 130 ELFFK-EDFDRAK-----WYEIGEVRREDIIKPYIEAIKSKVDVEA----IKKRKPFVVVDTSNGAGSLTLPYLLRELGC 199 (455)
T ss_dssp HHHHH-TCCCCCC-----GGGCCCEEECCCHHHHHHHHHTTSCHHH----HHHHCCEEEEECTTSGGGGTHHHHHHHHTC
T ss_pred HHHhc-CCcccCC-----ccCCcceeccchHHHHHHHHHhhCChhh----cccCCCEEEEECCCccHHHHHHHHHHHcCC
Confidence 65432 1111110 1123455455799999999987664321 123579999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012505 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (462)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~ 240 (462)
+++ .+|+.|||.||++.|+|.. ++++.+.+.+++.++|+|+++||||||++++|++|++++||++++|++++++++++
T Consensus 200 ~v~-~~~~~pdg~f~~~~~~p~~-~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~ 277 (455)
T 1wqa_A 200 KVI-TVNAQPDGYFPARNPEPNE-ENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKG 277 (455)
T ss_dssp EEE-EESCSCCTTCSSSCSCCCT-TTTHHHHHHHHHHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHHT
T ss_pred EEE-EECCcCCCCCCCCCCCCch-hHHHHHHHHHHHcCCCEEEEECCCCCeEEEEeCCCCEEChhHHHHHHHHHHHHhCC
Confidence 998 6899999999988888864 77899999999999999999999999999999999999999999999999998776
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHHH
Q 012505 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLN 320 (462)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~ 320 (462)
+..||.+.+||. +++.+++++|+++++|+|||||++++|.+.+ +.||||+|||++|+++.+.+||+++++++++
T Consensus 278 ~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a~l~~le 351 (455)
T 1wqa_A 278 GGLLVTTVATSN-LLDDIAKKHGAKVMRTKVGDLIVARALYENN-----GTIGGEENGGVIFPEHVLGRDGAMTVAKVVE 351 (455)
T ss_dssp SCEEEEETTSCT-HHHHHHHHTTCEEEEECSSTTHHHHHHHHTT-----CSEEEETTEEEECTTTCSSCCHHHHHHHHHH
T ss_pred CCeEEEeecCcH-HHHHHHHHCCCEEEEEcCcHHHHHHHHHhCC-----ceEEEcCcCcEEECCcCcCccHHHHHHHHHH
Confidence 667887777776 5566778899999999999999999998865 4699999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccce
Q 012505 321 KLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQ 400 (462)
Q Consensus 321 ~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG~ 400 (462)
+|+..+ ++|++++++||.++. .+.++. |++ + +.++|+++++..... + ..+..+||
T Consensus 352 ~l~~~g--------~~L~~~~~~l~~~~~---~~~~v~--~~~-------~-~~~~~~~l~~~~~~~-~--~~~~~~DG- 406 (455)
T 1wqa_A 352 IFAKSG--------KKFSELIDELPKYYQ---IKTKRH--VEG-------D-RHAIVNKVAEMARER-G--YTVDTTDG- 406 (455)
T ss_dssp HHHHHC--------SCHHHHHHTSCCCEE---EEECCB--CCS-------S-HHHHHHHHHHHHHHT-T--CEEECTTS-
T ss_pred HHHhcC--------CCHHHHHHhcccccE---eeEeeE--cCc-------H-HHHHHHHHHHhhHhh-c--cccccCce-
Confidence 887543 469999999998542 234565 776 4 678999997754321 1 24556899
Q ss_pred EEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 401 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 401 iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
||+.+++||++||||||||++|||+|+.+++.++++++.+.++|++++
T Consensus 407 lr~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~l~~~~~~~i~~~~ 454 (455)
T 1wqa_A 407 AKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKAL 454 (455)
T ss_dssp EEEECSSCEEEECCCSSSSBCCEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCcEEEEEeCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHhh
Confidence 999988889999999999999999999999999999999999998765
No 4
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=9.9e-80 Score=637.20 Aligned_cols=394 Identities=27% Similarity=0.428 Sum_probs=337.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++ +|.++.++.++.|+
T Consensus 63 ~l~~a~~~gl~a~G~~V~~~g~~pTP~l~~av~------~~~~~~GImITASHNP~~~NGiK~~~-~G~~i~~~~~~~I~ 135 (463)
T 1p5d_X 63 ELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAAN------VLEGKSGVMLTGSHNPPDYNGFKIVV-AGETLANEQIQALR 135 (463)
T ss_dssp HHHHHHHHHHHTBTCEEEEEEECCHHHHHHHHH------HSSCSEEEEECCTTSCTTEEEEEEEE-TTEECCTHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH------hcCCCeEEEEccCCCCcccceEEEEC-CCccCCHHHHHHHH
Confidence 589999999999999999999999999999998 57899999999999999999999999 99988777777776
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg~ 160 (462)
+.... .++ .+ ..+.+...+..+.|++++.+.++. .+++|||+||+||+++.+++++|++|||
T Consensus 136 ~~~~~------~~~---~~-~~g~~~~~d~~~~Y~~~l~~~~~~--------~~~lkivvD~~nG~~~~~~~~ll~~lG~ 197 (463)
T 1p5d_X 136 ERIEK------NDL---AS-GVGSVEQVDILPRYFKQIRDDIAM--------AKPMKVVVDCGNGVAGVIAPQLIEALGC 197 (463)
T ss_dssp HHHHH------TCC---CC-BCCEEEECCCHHHHHHHHHTTCCC--------SSCEEEEEECTTSGGGGTHHHHHHHHHE
T ss_pred HHHhc------CCc---cc-CCCceecCChHHHHHHHHHhhhcc--------cCCCEEEEECCCCcHHHHHHHHHHHcCC
Confidence 64421 111 11 245666678999999998876531 1589999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012505 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (462)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~ 240 (462)
+++ .+|+.|||.||++.|||+.+++++.+.+.+++.++|+|+++||||||++++|++|+++++|++++|++++++++.+
T Consensus 198 ~v~-~~~~~pDg~f~~~~p~p~~~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~L~a~~l~~~~~ 276 (463)
T 1p5d_X 198 SVI-PLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNP 276 (463)
T ss_dssp EEE-EESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHST
T ss_pred eEE-EEeCccCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCEEEEECCCCCeEEEEeCCCcEeCHHHHHHHHHHHHHHhCC
Confidence 998 6899999999999999999899999999999999999999999999999999999999999999999999999888
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcc-cCcHHHHHHHHH
Q 012505 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHW-LDDGAYLMVKLL 319 (462)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~-~~Dgi~aa~~ll 319 (462)
+..||.+.+||..+ +.+++++|+++++|+|||||+.++|++.+. .||||+|||++|++++. .+||+++++++|
T Consensus 277 ~~~vv~~v~ss~~l-~~~~~~~g~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~sG~~~~~~~~~~~~Dgi~aal~~l 350 (463)
T 1p5d_X 277 GADIIFDVKCTRRL-IALISGYGGRPVMWKTGHSLIKKKMKETGA-----LLAGEMSGHVFFKERWFGFDDGIYSAARLL 350 (463)
T ss_dssp TCEEEEETTSCTHH-HHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSBEEETTTTCSSBCHHHHHHHHH
T ss_pred CCeEEEEecCcHHH-HHHHHHcCCEEEEeCCcHHHHHHHHHhcCC-----ceeecCCCcEEeccccCCCCcHHHHHHHHH
Confidence 77888777777755 456678999999999999999999998764 59999999999998544 589999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
++++.. + ++|+|++++||+++.+.++ ++. |++ ..+.++|+++.+.. ...+ ..+..+||
T Consensus 351 e~~a~~----g----~~Ls~ll~~l~~~~~~~~~--~v~--~~~-------~~~~~~~~~l~~~~-~~~~--~~~~~~DG 408 (463)
T 1p5d_X 351 EILSQD----Q----RDSEHVFSAFPSDISTPEI--NIT--VTE-------DSKFAIIEALQRDA-QWGE--GNITTLDG 408 (463)
T ss_dssp HHHHTC----S----SCHHHHHHTSCCCEECCCE--EEE--CCT-------TTHHHHHHHHHHHC-CCCS--SEEECSSS
T ss_pred HHHHHh----C----CCHHHHHHHhhHhhCceeE--EEE--cCc-------hhHHHHHHHHHhcc-ccCC--Ccccccce
Confidence 988753 2 5699999999998654443 344 665 33578999994432 1111 24557899
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
||+.+++||++||||||||++|||+|+.|++.++++++.+.++|+++..
T Consensus 409 -lr~~~~~gw~lvRpSgTEP~~rvy~Ea~~~~~~~~l~~~~~~~i~~~~~ 457 (463)
T 1p5d_X 409 -VRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDS 457 (463)
T ss_dssp -EEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHCT
T ss_pred -EEEEecCcEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHHHHHhhcc
Confidence 9999888999999999999999999999999999999999999988754
No 5
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-79 Score=633.30 Aligned_cols=394 Identities=21% Similarity=0.224 Sum_probs=316.9
Q ss_pred CHHHHHHHHHHhCCCcEE-EeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVV-QYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~-~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~i 79 (462)
||++++++||+++|++|+ +.|.+|||+++|+++ +++|++||||||||||++||||||++++|.+++++.++.|
T Consensus 63 ~~~~a~a~gl~~~G~~V~~~~g~~pTP~~~~av~------~~~~~~GImITASHNP~~~NGiK~~~~~G~~i~~~~~~~I 136 (464)
T 1tuo_A 63 AFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVR------HLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAI 136 (464)
T ss_dssp HHHHHHHHHHHHHTCEEEEESSSCCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEEETTTEECCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHH------HhCCCceEEEcCCCCCchHCCEEEEcCCCCcCChHHHHHH
Confidence 589999999999999996 679999999999997 6789999999999999999999999999999998888887
Q ss_pred HHHHHHhhhhhhcccccccccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
++... + .. ....+.+...+..+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++||
T Consensus 137 e~~~~--~----~~-----~~~~g~~~~~d~~~~Y~~~l~~~~~~~~----i~~~~lkivvd~~nG~~~~~~~~~l~~lG 201 (464)
T 1tuo_A 137 EALVP--E----EA-----RALEGAYETLDLREAYFEALKAHLDLKA----LSGFSGVLYHDSMGGAGAGFLKGFLRHVG 201 (464)
T ss_dssp HHTCC--S----CC-----CCCCCCCEEECCHHHHHHHHHTTSCHHH----HTTCCSCEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhc--C----Cc-----cccCCceEEcCcHHHHHHHHhhhcChhh----ccccCCEEEEECCCCcHHHHHHHHHHHCC
Confidence 76432 1 10 1124566677899999999988765332 23468999999999999999999999999
Q ss_pred C--ccccccccccCCCCCCCCCCCCcHHHHHHHHHHHH-hcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHH
Q 012505 160 A--KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL-DNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236 (462)
Q Consensus 160 ~--~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~-~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l 236 (462)
| +++ .+|+.|||.||+++|||+. ..+..+.+.++ +.++|+|+++||||||++++|++|+++++|++++|++++++
T Consensus 202 ~~~~v~-~~~~~pDg~Fp~~~p~p~~-~~~~~l~~~v~~~~~adlgia~DgDaDR~~vvd~~G~~l~gd~i~~Lla~~l~ 279 (464)
T 1tuo_A 202 LEIPVR-PIREEPHPLFHGVNPEPIP-KNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRF 279 (464)
T ss_dssp CCCCEE-EESCSCCTTGGGSCSCCSG-GGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHH
T ss_pred CCceEE-EEecccCCCCCCCCcCCCc-hhHHHHHHHHHhccCCCEEEEECCCCCeEEEEeCCCEEECHHHHHHHHHHHHH
Confidence 9 888 6899999999999999996 56788889998 99999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHH
Q 012505 237 EEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (462)
Q Consensus 237 ~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (462)
++.++..||.+.+||. .++.+++++|+++++|||||||+.++|++.+ ++||||+|||++|+++.+.+||+++++
T Consensus 280 ~~~~~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l 353 (464)
T 1tuo_A 280 RKGHRGRAVKNFAVTW-LLDRLGERLGFGVTTTPVGFKWIKEEFLKGD-----CFIGGEESGGVGYPEHLPERDGILTSL 353 (464)
T ss_dssp HTTCCSEEEEETTSCT-HHHHHHHHHTCCEEEECSSHHHHHHHHTTTC-----EEEEECTTSBEEETTTEEEECHHHHHH
T ss_pred hhCCCCeEEEeecchH-HHHHHHHHcCCeEEEecCcHHHHHHHHHhcC-----cEEEEccceeEEECCcCcCCCHHHHHH
Confidence 8666667887766665 6667888899999999999999999998754 579999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCcc--cceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCC-CC
Q 012505 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF--AVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQ-KA 393 (462)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~-~~ 393 (462)
+++++++..+ ++|+|++++||+.+. ..+.+.++. |++ . .+|+++.+. ....+.+ ..
T Consensus 354 ~~le~~a~~g--------~~L~ell~~l~~~~~~~~~~~~~~v~--~~~-------~---~~~~~l~~~-~~~~~~~~~~ 412 (464)
T 1tuo_A 354 LLLESVAATG--------KDLAEQFKEVEALTGLTHAYDRLDLP--LKA-------P---LDLTPFREP-RPLAGLTPKG 412 (464)
T ss_dssp HHHHHHHHHS--------CCHHHHHHHHHHHHTCCCEEEEEC----------------------------CCCTTCCEEE
T ss_pred HHHHHHHhhC--------CCHHHHHHHHHHHcCccccceEEeEE--eCC-------H---HHHHhhhhh-HhhCCCceeE
Confidence 9999887542 459999977654332 234455566 776 2 178888663 2222222 12
Q ss_pred CccccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012505 394 PVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 445 (462)
Q Consensus 394 ~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~ 445 (462)
+..+|| ||+.+++||++||||||||++|||+|+.+++.++++++.+.++|+
T Consensus 413 v~~~DG-l~~~~~~~w~lvRpSgTEP~lrvy~Ea~~~~~~~~l~~~~~~~i~ 463 (464)
T 1tuo_A 413 VDTLDG-VKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE 463 (464)
T ss_dssp EECSSS-EEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred EEcCCe-EEEEECCEEEEEEcCCCccEEEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 456899 999987899999999999999999999999999999999988764
No 6
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=2.7e-77 Score=617.15 Aligned_cols=385 Identities=23% Similarity=0.297 Sum_probs=314.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ +++|++||||||||||++||||||++++|.+++++.++.|+
T Consensus 76 ~~~~a~a~gl~s~Gi~V~~~g~~pTP~l~fav~------~~~a~~GImITASHNP~~~NGiK~~~~~G~~i~~~~~~~Ie 149 (469)
T 3pdk_A 76 MLEGALVAGLLSTGAEVMRLGVISTPGVAYLTK------ALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIE 149 (469)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCHHHHHHHHH------HHTCSEEEEECCTTSCTTEEEEEEEETTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH------hcCCCeEEEEEeCCCcchhCcEEEecCCCcCCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999999888887777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEE-EccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKR-VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+..... .++++.......+.+.. .+..+.|++++.+.++. ..+++|||+||+||+++.+++++|++||
T Consensus 150 ~~~~~~----~~~~~~~~~~~~g~~~~~~d~~~~Y~~~l~~~~~~-------~~~~lkivvD~~nG~~~~~~~~ll~~lG 218 (469)
T 3pdk_A 150 ALLDKE----VDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEE-------DFSGLHIALDCAHGATSSLAPYLFADLE 218 (469)
T ss_dssp HHHHSS----SCCSCCCCGGGSCCEEECTHHHHHHHHHHHTTCSS-------CCTTCEEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhcc----ccccCccccccCccEEEcccHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 654210 01111000112344543 35778888888776531 3568999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|+|+.+ +.+.+.|++.++|+|+++||||||++++|++|++++||++++|+++++++..
T Consensus 219 ~~v~-~l~~~pDg~f~n~~~~~~~~---~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~Lla~~l~~~~ 294 (469)
T 3pdk_A 219 ADIS-TMGTSPNGMNINDGVGSTHP---EVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETG 294 (469)
T ss_dssp CEEE-EESCCCCSSCTTSSCSTTST---HHHHHHHHHHTCSEEEEECTTSSBEEEEETTSCEECHHHHHHHHHHHHHHTT
T ss_pred CEEE-EECCCcCCCCCCCCCCCCCH---HHHHHHHHhcCCcEEEEECCCCCeEEEECCCCcEEChhHHHHHHHHHHHHhC
Confidence 9998 68999999999988887764 4577889999999999999999999999999999999999999999999876
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHH
Q 012505 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (462)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (462)
++..||.+++||. .++.+++++|+++++|+||||||+++|.+.+. +||||+|||++|+++.+.+||++++++
T Consensus 295 ~l~~~~vv~tv~ss~-~l~~~~~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~aal~ 368 (469)
T 3pdk_A 295 QLKHNTVVSTVMSNL-GFYKALEANGITSDKTAVGDRYVMEEMKRGGY-----NLGGEQSGHIILLDYITTGDGMLSALQ 368 (469)
T ss_dssp CSGGGEEEEETTSCH-HHHHHHHHTTCEEEEECSSHHHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHH
T ss_pred CCCCCeEEEeecCcH-HHHHHHHHcCCEEEEEcCchHHHHHHHhhcCC-----eEEEcccCCEecCCCCCCCCHHHHHHH
Confidence 3456887665555 66667788999999999999999999998764 599999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHH--HHhhhcCCCCCCCCCc
Q 012505 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKH--LENRVDSDPKLQKAPV 395 (462)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~--l~~~~~~~~~~~~~~~ 395 (462)
++++|+..+ ++|+++++.+|.+.. . .++++ |+. +..+|+. +.+
T Consensus 369 ~le~l~~~g--------~~Lsel~~~l~~~~~-~--~~~v~--~~~---------k~~~~~~~~~~~------------- 413 (469)
T 3pdk_A 369 LVNIMKMTK--------KPLSELAGEMTKFPQ-L--LVNVR--VTD---------KKLALENEKIKE------------- 413 (469)
T ss_dssp HHHHHHHHT--------CCHHHHHTTSCCCCE-E--EEEEC--CSC---------HHHHTTCHHHHH-------------
T ss_pred HHHHHHHcC--------CCHHHHHHHHhhcCc-e--EEEEe--cCc---------hhhhhccHHHHH-------------
Confidence 999887653 459999999998532 2 33343 322 3343321 111
Q ss_pred cccceEEEE-ecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 396 NYEGQVRVS-GSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 396 ~~dG~iki~-~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
.+++ ++.. .++||+|||||||||++|||+||.|++.++++++.+.++|++.+
T Consensus 414 ~i~~-~~~~~~~~gw~lvRpSgTEP~lRv~~Ea~~~~~~~~l~~~~~~~i~~~~ 466 (469)
T 3pdk_A 414 IIRV-VEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEV 466 (469)
T ss_dssp HHHH-HHHHCCSSCEEEEECCSSSCCEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HheEeCCCcEEEEEeCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 1223 3222 46899999999999999999999999999999999999998753
No 7
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=3.5e-77 Score=613.13 Aligned_cols=385 Identities=23% Similarity=0.271 Sum_probs=315.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++|+++||+++|++|+++|.+|||+++|+++ +++|++||||||||||++||||||++++|.+++++.++.|+
T Consensus 56 ~l~~a~~~gl~s~G~~V~~~g~~pTP~~~~av~------~~~a~~GImITASHNP~~~NGiK~~~~~G~~l~~~~~~~Ie 129 (443)
T 3i3w_A 56 FLKFALVSGLNAAGIDVLDLGVVPTPVVAFMTV------KHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALEEEVE 129 (443)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEEETTSCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCHHHHHHHHH------hcCCCeEEEEEECCCCchhCeEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 67899999999999999999999999999999988888777
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEE-ccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+.... .+.+. .....+.+... +..+.|++++.+.++.. ++.++ |||+||+||+++.+++++|++||
T Consensus 130 ~~~~~--~~~~~-----~~~~~g~~~~~~d~~~~Y~~~l~~~~~~~-----i~~~~-kivvD~~nG~~~~~~~~ll~~lG 196 (443)
T 3i3w_A 130 DMIDG--DFIYQ-----PQFKFGSYKILANAIDEYIESIYSRFAKF-----VNYKG-KVVVDCAHGAASHNFEALLDKFG 196 (443)
T ss_dssp HHHTS--CCCCC-----TTSCCCCEEECTTTTHHHHHHHHHHHTTT-----CCCCS-EEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhc--ccccc-----ccccCccEEEChhHHHHHHHHHHHhCchh-----hccCC-eEEEECCCChHHHHHHHHHHHcC
Confidence 75421 11110 01234556655 68899999999988631 24567 99999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+|+.|||.||++.|+|+.+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++++
T Consensus 197 ~~v~-~~~~~pDg~f~n~~~~~~~~---~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~ 272 (443)
T 3i3w_A 197 INYV-SIASNPDGLNINVGCGATCV---SNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICG 272 (443)
T ss_dssp CEEE-ESSCCCCSSCTTTTCSTTCH---HHHHHHHHHHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTTT
T ss_pred CEEE-EECCccCCCCCCCCCCCCCH---HHHHHHHHhcCCcEEEEECCCCceEEEECCCCcEeChhHHHHHHHHHHHHhC
Confidence 9998 68999999999998988765 4577889999999999999999999999999999999999999999998877
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHH
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (462)
+...||.+.+||. .++.+++++|+++++||||||||+++|.+.+. .||||+|||++|+++++.+||++++++++
T Consensus 273 ~~~~vv~tv~ss~-~l~~~~~~~G~~~~~t~~G~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~a~l~~l 346 (443)
T 3i3w_A 273 GTNGIVGTQMTNM-SYENHYRANKIPFIRSKVGDRYVLEDLVKYGY-----KIGGESSGHVINLNFGTTGDGLFTAIQLL 346 (443)
T ss_dssp CCSCEEEETTSCH-HHHHHHHHTTCCEEEESSSTTHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHHHH
T ss_pred CCCeEEEeecCch-HHHHHHHHCCCeEEEEeChHHHHHHHHhhcCc-----EEEEEeeCcEEEcCcCcCCCHHHHHHHHH
Confidence 6566887777666 55556788999999999999999999998764 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccc
Q 012505 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (462)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (462)
+.|+.. + ++|+++++++|.++.. ..++. |++- . .+ .....+.+.+.+... ..
T Consensus 347 e~l~~~----g----~~Lsel~~~~~~~p~~---~~~v~--~~~~-~-~~-~~~~~~~~~i~~~~~----------~~-- 398 (443)
T 3i3w_A 347 AIFSQA----D----KPVSEFKLQGELMQQT---LINVP--LTKK-V-AR-EDLQKVASDVNDVEK----------RL-- 398 (443)
T ss_dssp HHTTTC----S----SCGGGTSCSSCCCEEE---EEEEE--CSSC-C-CH-HHHHTTHHHHHHHHH----------HH--
T ss_pred HHHHHc----C----CCHHHHHHhhhhhcce---EEEEE--cCcc-c-ch-hhHHHHHHHHHHHHH----------hc--
Confidence 887653 2 4699999999986322 23344 4320 0 00 112233333322110 01
Q ss_pred eEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 400 QVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 400 ~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
.++||+|||||||||++|||+||.|++.++++++.+.++|++.
T Consensus 399 -----~~~gw~lvR~SgTEP~~rv~~Ea~~~~~~~~l~~~~~~~i~~~ 441 (443)
T 3i3w_A 399 -----GNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_dssp -----GGGEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999999999999999998863
No 8
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=1.1e-76 Score=625.19 Aligned_cols=415 Identities=20% Similarity=0.238 Sum_probs=326.0
Q ss_pred HHHHHHHHHHhCCCcEEE---eCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHH
Q 012505 2 LQDAVSRGITGAGLDVVQ---YGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDI 78 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~---~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ 78 (462)
++++++++|+++|++|++ +|.+|||+++|++++.+.+ ..+|++||||||||||++||||||++++|.++++++++.
T Consensus 118 ~~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~~~~~-~~~~~~GImITASHNP~~~NGiK~~~~~G~~~~~~i~~~ 196 (570)
T 3na5_A 118 AFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKK-GGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKV 196 (570)
T ss_dssp HHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHHHHHT-CSSCCEEEEECCTTCCTTCEEEEEECTTSSCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHHHhCCC-ccccceEEEEEeCCCChHHCcEEEecCCCCcCCHHHHHH
Confidence 567778999999999994 7999999999999732100 112899999999999999999999999999999998888
Q ss_pred HHHHHHHhhhhhhcccccc--c-ccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHH
Q 012505 79 LERAADIYKQFMVEGLTNL--E-KQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVL 155 (462)
Q Consensus 79 ie~~~~~~~~~~~~~~~~~--~-~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll 155 (462)
|++...........++... . ....+.+...++.+.|++++.+.++... ++.+++|||+||+||+++.+++++|
T Consensus 197 Ie~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~Yi~~l~~~i~~~~----i~~~~lkIvvD~~~Gag~~~~~~il 272 (570)
T 3na5_A 197 VEDRANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAA----IQKAGLTLGVDPLGGSGIEYWKRIA 272 (570)
T ss_dssp HHHHHHHHHHTTTTTCCCCCHHHHHHTTCEEEECCHHHHHHHGGGTSCHHH----HHHHTCCEEEECTTCTTHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccchhhhccCCeeeccchHHHHHHHHHhhcChhh----hccCCCEEEEECCCCcHHHHHHHHH
Confidence 8775432110011111000 0 0123556677899999999987664322 1235799999999999999999999
Q ss_pred hhcCCccccccccccCCCCCCCCC--------CCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhH
Q 012505 156 EPLGAKTSGSQFLEPDGMFPNHIP--------NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRL 227 (462)
Q Consensus 156 ~~lg~~v~~~~~~~~d~~f~~~~p--------~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~ 227 (462)
++|||+++ .+++.+||.||++.| +|+.+++++.+.+. +.++|+|+++||||||++++|+ |+++++|++
T Consensus 273 ~~lG~~v~-~v~~~~D~~F~~~~p~~~G~i~~~~~~~~al~~l~~~--~~~aDlgia~DgDaDR~~ivd~-g~~l~gd~~ 348 (570)
T 3na5_A 273 EHYKLNLT-LVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLAL--RDKFDLAFANDPDYDRHGIVTP-AGLMNPNHY 348 (570)
T ss_dssp HHTTCCEE-ESCCCCCTTCTTSBCCTTSSCCCCTTCTTTTHHHHTT--GGGCSEEEEECTTSCBEEEEET-TEECCHHHH
T ss_pred HHcCCeEE-EECCEECCCCCCCCCCcccccCCCCCChHHHHHHHHh--ccCCCEEEEECCCCCeEEEEEC-CEEECHhHH
Confidence 99999988 689999999999755 66677777777654 7899999999999999999999 999999999
Q ss_pred HHHHHHHHHHhCCC---CeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecC
Q 012505 228 IALMSAIVLEEHPG---TTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE 304 (462)
Q Consensus 228 ~~Ll~~~~l~~~~~---~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~ 304 (462)
++|+++|+++++++ ..+|..+++|+.+++.+++++|+++++||||||||+++|.+.+ ++||||||||++|+.
T Consensus 349 lal~a~~ll~~~~~~~~~~~v~~t~vSs~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~f~~ 423 (570)
T 3na5_A 349 LAVAINYLFQHRPLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGS-----FGFGGEESAGASFLR 423 (570)
T ss_dssp HHHHHHHHTTSCTTSCTTCEEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTS-----EEEEEETTTEEEECC
T ss_pred HHHHHHHHHHhCCCCCCCceEEEeeCchHHHHHHHHHCCCceEEecccHHHHHHHHHhcC-----CeEEEeccCCccccc
Confidence 99999999987663 3333345555558888999999999999999999999998754 579999999988876
Q ss_pred -----CcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccc-eeeeeecccCccccCCcccchhHHHHH
Q 012505 305 -----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAV-ELRLKIDQNHSDLKGGSFRDYGEAVLK 378 (462)
Q Consensus 305 -----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~v~~ 378 (462)
+.+.+||++++++++++++..+ ++|++++++||++|.+. ..|+.++ |++ + +..+|+
T Consensus 424 ~~g~~~~~dkDGi~aal~~le~~a~~g--------~~lsell~~l~~~yg~~~~~r~~~~--~~~-------~-~k~~m~ 485 (570)
T 3na5_A 424 FDGTPWSTDKDGIIMCLLAAEITAVTG--------KNPQEHYNELAARFGAPSYNRLQAS--ATS-------A-QKAALS 485 (570)
T ss_dssp TTSCCSCSSCCHHHHHHHHHHHHHHHS--------SCHHHHHHHHHHHHCCCEEEEEEEE--CCH-------H-HHHHHH
T ss_pred ccccceeecCcHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceeEEecCC--CCH-------H-HHHHHH
Confidence 5667899999999999887653 45999999999865332 3456666 765 2 347788
Q ss_pred HHHhhh---cCCCCCC---------CCCccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHHHHHHHhh
Q 012505 379 HLENRV---DSDPKLQ---------KAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAATK 445 (462)
Q Consensus 379 ~l~~~~---~~~~~~~---------~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~~~~~~i~ 445 (462)
++.+.. ....+.+ .....+|| ||+.+++||+++|||||||++|||+|+ .+++.++++.+.++++|+
T Consensus 486 ~l~~~~~~~~~~~g~~i~~~~~~~~~~~~~iDG-lkv~~~dgW~lvRpSgTEP~lriy~Ea~~~~e~l~~l~~~~~~~v~ 564 (570)
T 3na5_A 486 KLSPEMVSASTLAGDPITARLTAAPGNGASIGG-LKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVS 564 (570)
T ss_dssp TCCGGGCCCSEETTEECCEEEEECTTTCCEEEE-EEEECSSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHHHHHH
T ss_pred HhhhccCcchhhcCcceEEEeecccCCcCCCCe-EEEEecCcEEEEEECCCCCeEEEEEEcCCCHHHHHHHHHHHHHHHH
Confidence 876431 1111111 12345799 999988999999999999999999999 899999999999999988
Q ss_pred cCCC
Q 012505 446 EFPA 449 (462)
Q Consensus 446 ~~~~ 449 (462)
++++
T Consensus 565 ~~~~ 568 (570)
T 3na5_A 565 EVLK 568 (570)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7653
No 9
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=1.5e-74 Score=600.24 Aligned_cols=393 Identities=20% Similarity=0.199 Sum_probs=312.2
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~~~ie 80 (462)
||++++++||+++|++|+++|.+|||+++|+++ ++++ +||||||||||++||||||++++|.++.+. ++.|+
T Consensus 64 ~~~~a~~~gl~a~Gi~V~~~g~~pTP~l~fav~------~~~~-~GImITASHNP~~~NGiK~~~~~G~~~~~~-e~~I~ 135 (481)
T 4hjh_A 64 DIAALAMGAIEDAGFTPVNCGVLPTPALSYYAM------GAKA-PSIMVTGSHIPDDRNGLKFYRRDGEIDKDD-EAAIS 135 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HTTC-CEEEECCTTSCTTEEEEEEEETTEECCHHH-HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCcCcHHHHHHHH------hcCC-ceEEEecCCCCCCCCCEEEeCCCCCCCCHH-HHHHH
Confidence 589999999999999999999999999999997 5666 799999999999999999999999755444 44444
Q ss_pred HHHHHhhhhhhcccccccccCCcceEEEccHHH-HHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012505 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSV-YTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~~~ll~~lg 159 (462)
+... .+.+. ++ .....+. ...+..+. |++++.+.++.. ..+++||||||+||+++.+++++|++||
T Consensus 136 ~~~~---~~~~~-~~--~~~~~g~-~~~d~~~~~Yi~~~~~~~~~~------~~~~lkivvd~~~Ga~~~~~~~~l~~lG 202 (481)
T 4hjh_A 136 AAYR---KLPAI-LA--ARKHVGS-TETDAALQAYADRYAGFLGKG------SLNGLRVGVYQHSSVARDLLMYLLTTLG 202 (481)
T ss_dssp HHHH---TCCC--CC--CCCCCCS-CCCCHHHHHHHHHHHHHHCTT------TTTTCEEEEEEETCTTHHHHHHHHHHTT
T ss_pred HHHh---hhccc-cc--cccccCc-ccccccHHHHHHHHHHhcCcc------cccCCEEEEECCCChHHHHHHHHHHHcC
Confidence 4221 11100 00 0001222 12467788 999999888532 2368999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012505 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (462)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~ 239 (462)
|+++ .+++ ++.|++++|+|..+++++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++.
T Consensus 203 ~~v~-~l~~--~~~f~~~~~~p~~~e~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~l~~L~a~~l~--- 276 (481)
T 4hjh_A 203 VEPV-ALGR--SDIFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVG--- 276 (481)
T ss_dssp CEEE-EEEE--CSSCCCCCTTSCCHHHHHHHHHHHTSTTCSEEEEECTTSSSEEEECTTSCEECHHHHHHHHHHHTT---
T ss_pred CeEE-EecC--CCCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCceEEEcCCCCEEChHHHHHHHHHHhh---
Confidence 9988 4664 578999888888889999999999999999999999999999999999999999999999999872
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceEecCC----------cccC
Q 012505 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKEN----------HWLD 309 (462)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~----------~~~~ 309 (462)
...|+ ++++|+..++.+ ++ ++++|+|||+||.++|++....|.+++||||+|||++|+++ .+.+
T Consensus 277 -~~~vv-~~v~ss~~l~~~---~~-~~~~t~vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~ 350 (481)
T 4hjh_A 277 -ADTLV-TPVTSNTALESR---FP-KVLRTRVGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTR 350 (481)
T ss_dssp -CSEEE-EETTSCTTHHHH---CS-CEEEECSSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEE
T ss_pred -cCcEE-EEEcChHHHHHh---cC-ceEEeccchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCc
Confidence 23455 555555555544 55 99999999999999999865545567899999999998864 3479
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhh-----
Q 012505 310 DGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRV----- 384 (462)
Q Consensus 310 Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~----- 384 (462)
||++++++++++|+..+ ++|++++++||++|.+++ ++ .. |+| +.+.++|++|++..
T Consensus 351 Dgi~a~l~~le~~a~~g--------~~Lsell~~l~~~~~~~~-~~-~~--~~~-------~~~~~~m~~l~~~~~~~~~ 411 (481)
T 4hjh_A 351 DALLPILACLATVHEKK--------TPLSTIARSYGFRVALSD-RL-QN--IPQ-------EASTAFLALLEDADKRASL 411 (481)
T ss_dssp ESHHHHHHHHHHHHHHT--------CCHHHHHHTTCCCEEEEE-EE-ES--CCH-------HHHHHHHHHTTSHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC--------CCHHHHHHHHHHHhCCce-ee-cC--CCH-------HHHHHHHHHHHhcCChHHH
Confidence 99999999999887653 459999999998765433 21 12 676 45789999997652
Q ss_pred cCCCCCCCCCccccceEEEEecC-eEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 385 DSDPKLQKAPVNYEGQVRVSGSG-GWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 385 ~~~~~~~~~~~~~dG~iki~~~~-~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
....+....+..+|| ||+.++| +|++||||||||+||+|+||.|++.++++++.+.++|++
T Consensus 412 ~~~~g~~~~v~~~DG-lri~~~dg~wvlvRpSgTEP~lrvy~Ea~s~e~~~~l~~~~~~~i~~ 473 (481)
T 4hjh_A 412 FPAGDAIVRVETIDG-VKLFFQSGNAVHYRASGNAPELRCYVESSDDTQAAKLQALGLEIARK 473 (481)
T ss_dssp SCTTSCEEEEECSSS-EEEEETTSCEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HhhcCccccccCCCe-EEEEecCCcEEEEecCCCCceEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 111111124566899 9999765 599999999999999999999999999999999999987
No 10
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=3.8e-74 Score=605.36 Aligned_cols=428 Identities=20% Similarity=0.213 Sum_probs=335.1
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCCCCeEEEEcCCCCC---CCCCeeeEEcCCCCCCCHH
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLP---YNRNGLKFFTNAGGLGKPD 74 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~a~gGI~ITaSHnp---~~~nGiK~~~~~G~~~~~~ 74 (462)
+++++++++|+++|++|+++ |.+|||+++|+++ ++++++|||||||||| ++||||||++++|++++++
T Consensus 68 ~~~~~~a~~l~a~Gv~V~~~~~~g~~pTP~vs~av~------~~~a~gGImITASHNP~~~~~~nGiK~~~~~G~~~~~~ 141 (561)
T 3pmg_A 68 EAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIR------KIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEA 141 (561)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEECCHHHHHHHHH------HHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCccCHHHHHHHHH------HhcCCeEEEEEeCCCCCCCCCcceEEEEeCCCCcCCHH
Confidence 47899999999999999998 8999999999998 5688999999999999 5689999999999999998
Q ss_pred HHHHHHHHHHHhhhhh--------hccccccccc-----CCcceEEEccHHHHHHHHHHHHHhhcCCC-CCCCCCcEEEE
Q 012505 75 IKDILERAADIYKQFM--------VEGLTNLEKQ-----TSTSIKRVDYMSVYTSDLVKAVRRAAGDI-EKPLEGFHIVV 140 (462)
Q Consensus 75 ~~~~ie~~~~~~~~~~--------~~~~~~~~~~-----~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~-~~~~~~~kvvv 140 (462)
+++.|++..+..+.+. +..+...... ..+.+...+..+.|++.+.+.++...+.. ....+++|||+
T Consensus 142 ~~~~Ie~~~~~i~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~~d~~~i~~~~~~~~~lkIvv 221 (561)
T 3pmg_A 142 ITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRI 221 (561)
T ss_dssp HHHHHHHHHHHCCEEEECTTCCCCTTSCEEEEECCTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEE
T ss_pred HHHHHHHHHHhhhhhccccccccchhhhccccccccccccCCceEecChHHHHHHHHHHhcChHHhhhhhccCCCcEEEE
Confidence 8888877554322111 0000000000 11234556788999999987665322100 00115799999
Q ss_pred eCCCCCchHHHHHHH-hhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCC
Q 012505 141 DAGNGAGGFFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTG 219 (462)
Q Consensus 141 d~~~G~~~~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G 219 (462)
||+||+++.+++++| ++|||+++..+|+.|||.||+++|||+.+ .+..+.+.|++.++|+|+++||||||++++|++|
T Consensus 222 D~~~Ga~~~~~~~il~~~lG~~v~~~v~~~pd~~F~~~~P~P~~~-~~~~L~~~v~~~~aDlgia~DgDaDR~~ivd~~G 300 (561)
T 3pmg_A 222 DAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLT-YAADLVETMKSGEHDFGAAFDGDGDRNMILGKHG 300 (561)
T ss_dssp ECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTT-TTHHHHHHHHTSCCSEEEEECTTSSCEEEEEGGG
T ss_pred ECCCCchHHHHHHHHHHHcCCCeEEEECCEECCCCCCCCCCCChH-HHHHHHHHHHhcCCCEEEEEcCCCCeEEEEeCCC
Confidence 999999999999976 99999986347999999999999999864 4678889999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHH-----HhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEe
Q 012505 220 HELNRNRLIALMSAIVL-----EEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAI 294 (462)
Q Consensus 220 ~~l~~d~~~~Ll~~~~l-----~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~ 294 (462)
+++++|++++|++++++ +..+...||.+.+ |+.+++.+++++|+++++||||||||+++|.+.+ ..|||
T Consensus 301 ~~v~~~~~lalla~~l~~~~~~~~~~~~~vv~tv~-Ss~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~-----~~~gG 374 (561)
T 3pmg_A 301 FFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMP-TSGALDRVANATKIALYETPTGWKFFGNLMDASK-----LSLCG 374 (561)
T ss_dssp CBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEETT-SCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTC-----CSEEE
T ss_pred cEECccHHHHHHHHHHHhhhhhHhcCCCeEEEEec-hHHHHHHHHHHcCCCEEEEeccHHHHHHHhccCC-----eEEEE
Confidence 99999999999999864 3333345775554 4457788999999999999999999999998754 46999
Q ss_pred eeecceEecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcc-cceeeeeecccCccccCCcccchh
Q 012505 295 ETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSDLKGGSFRDYG 373 (462)
Q Consensus 295 E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~v~~~~~~~~~~~~~~~~ 373 (462)
|||||+ ++++.+.+||+++++++|++|+..+ ++|+|++++||++|. ....|.++.. |+| +.+
T Consensus 375 EeS~G~-~~~~~~~kDGi~aal~~le~la~~g--------~~lsell~~l~~~yG~~~~~r~d~~~-~~~-------~~~ 437 (561)
T 3pmg_A 375 EESFGT-GSDHIREKDGLWAVLAWLSILATRK--------QSVEDILKDHWHKFGRNFFTRYDYEE-VEA-------EGA 437 (561)
T ss_dssp ETTTEE-EETTSSSCCHHHHHHHHHHHHHHHC--------SCHHHHHHHHHHHHCEEEEEEEEEEE-ECH-------HHH
T ss_pred EecCCc-CCCeeecCCHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCccccccccccc-CCH-------HHH
Confidence 999885 6788899999999999999887653 459999999997652 2223444432 777 567
Q ss_pred HHHHHHHHhhhc--CCCC-----------------------CCCCCccccceEEEEec-CeEEEEeecCCC---ceeEEE
Q 012505 374 EAVLKHLENRVD--SDPK-----------------------LQKAPVNYEGQVRVSGS-GGWFLLRLSLHD---PVLPLN 424 (462)
Q Consensus 374 ~~v~~~l~~~~~--~~~~-----------------------~~~~~~~~dG~iki~~~-~~wvliRpSgTE---P~irvy 424 (462)
+++|++|++... ...+ ....+..+|| ||+.++ ++|++||||||| |++|||
T Consensus 438 ~~vm~~L~~~~~~~~~~g~~~~~~~~~~~v~~~~~f~~~dpvd~~v~~~dG-vri~~~dgswvlvRpSGte~~~P~lRvY 516 (561)
T 3pmg_A 438 TKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQG-LRLIFADGSRIIFRLSGTGSAGATIRLY 516 (561)
T ss_dssp HHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCCC-EEEEETTSCEEEEEEEECSSSCEEEEEE
T ss_pred HHHHHHHHhcCCcccccccccccccccceeeecccccccCcccCccccCce-EEEEeCCCCEEEEecCCCCCCCceEEEE
Confidence 899999986542 1100 0023556899 999965 579999999999 999999
Q ss_pred EeeCCHHHHHHHHHHHHHHhhcCCC--CChhhHHHHHh
Q 012505 425 IEAPSREDAVKLGLAVAAATKEFPA--LDTSALDKFVQ 460 (462)
Q Consensus 425 ~Ea~~~~~a~~l~~~~~~~i~~~~~--~~~~~~~~~~~ 460 (462)
+|+.+. .++++.+..++.++.+++ +.+++|++++-
T Consensus 517 ~Ea~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (561)
T 3pmg_A 517 IDSYEK-DNAKINQDPQVMLAPLISIALKVSQLQERTG 553 (561)
T ss_dssp EEEEEC-CTTTTTSCHHHHHHHHHHHHHHHHTHHHHHC
T ss_pred EEecCC-CHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 999875 567777788888888777 68999999874
No 11
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=9.9e-74 Score=600.94 Aligned_cols=409 Identities=20% Similarity=0.204 Sum_probs=298.2
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccCC-----CCeEEEEcCCCCCCCCCeeeEEcCCCCCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCP-----VDGAIMITASHLPYNRNGLKFFTNAGGLGK 72 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l~-----a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~ 72 (462)
++++++++||+++|++|+++ |.+|||+++|+++ +++ |++||||||||||++||||||++++|.+++
T Consensus 77 ~~~~~~~~gl~a~Gi~V~~~~~~G~~pTP~l~~av~------~~~~~~~~a~~GImITASHNP~~~NGiK~~~~~G~~~~ 150 (524)
T 2z0f_A 77 PAWATALSVFAAHGIEVRVEADGDYTPTPLVSLAIL------EHNAHHEAKADGVLLTPSHNPPEDGGFKYNPPTGGPAN 150 (524)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSSSCCCHHHHHHHHH------HHHTTCSSCCEEEEECC--CCTTCEEEEEECTTSSCCC
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccCcHHHHHHHH------HhCCCccccceEEEEcCCCCCchhCCEEEECCCCCcCC
Confidence 47899999999999999985 8999999999998 455 699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccc-ccCCcceEEEccHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHH
Q 012505 73 PDIKDILERAADIYKQFMVEGLTNLE-KQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFA 151 (462)
Q Consensus 73 ~~~~~~ie~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~~~~~~kvvvd~~~G~~~~~~ 151 (462)
+++++.|+..........++++.... ....+.+...++.+.|++++.+.++.+. ++.+++|||+||+||+++.++
T Consensus 151 ~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~----i~~~~lkivvd~~nG~~~~~~ 226 (524)
T 2z0f_A 151 ARITRAIEERANALLQEGLKGVKRLPLREALARAKPFDYAGLYVEKVAEAVDLEA----IRASGLRIGVDPLGGASLRVW 226 (524)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHHHCEEECHHHHHHHHGGGTSCHHH----HHHSCCCEEEECTTSTTHHHH
T ss_pred HHHHHHHHHHHHhhcccccccccccChhhhcccccccchHHHHHHHHHHhcChhh----hccCCCeEEEeCCCCchHHHH
Confidence 98887777643211000111110000 0001224455788999999877654321 123589999999999999999
Q ss_pred HHHHhhcCCccccccccccCCCCCCCC--------CCCCcHHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCcccc
Q 012505 152 AKVLEPLGAKTSGSQFLEPDGMFPNHI--------PNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELN 223 (462)
Q Consensus 152 ~~ll~~lg~~v~~~~~~~~d~~f~~~~--------p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~ 223 (462)
+++|++|||+++ .+|+.+||.||.+. |+|+.++++..+.+ ++.++|+|+++||||||++++|++ ++++
T Consensus 227 ~~ll~~lG~~v~-~v~~~~d~~f~~~~~~~~g~~~p~p~~~~~l~~~~~--~~~~aDlgia~DgDaDR~~vvd~~-~~l~ 302 (524)
T 2z0f_A 227 ERLAESHGLPLE-VVNPTLDPTFRFMPKDHDGKIRMDCSSPYAMAGLLA--LKDRFDLAIGNDPDADRHGIVTPR-GLMN 302 (524)
T ss_dssp HHHHHHHTCCEE-EC-------------------------------CCC--CCCCSSEEEEECTTSCSEEEEETT-EECC
T ss_pred HHHHHHcCCcEE-EEcCccCCCCCCCCCCCccccCCCCCChhHHHHHHH--hhcCCCEEEEeCCccccceEEecC-ceec
Confidence 999999999988 58999999999753 56666554433321 488999999999999999999999 8999
Q ss_pred chhHHHHHHHHHHHhC--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceE
Q 012505 224 RNRLIALMSAIVLEEH--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA 301 (462)
Q Consensus 224 ~d~~~~Ll~~~~l~~~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~ 301 (462)
+|++++|++++++++. ++..|+.+.+||. +++.+++++|+++++|+||||||.++|.+.+ +.||||+|||++
T Consensus 303 gd~i~alla~~l~~~~~~~~~~vv~t~vss~-~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~ 376 (524)
T 2z0f_A 303 PNHYLAAALHHLYTTRSWPGAKVGKTAVTSA-LLDRVAQALGREVYETPVGFKHFVAGLLEGW-----LGFAGEESAGAS 376 (524)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETTSCT-HHHHHHHHTTCCEEEECSSTHHHHHHHHHSS-----EEEEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhcCCCCCeEEEecccHH-HHHHHHHHhCceEEEcCCcHHHHHHHHhhCC-----cEEEEEccCcEE
Confidence 9999999999998876 4456776776665 6778889999999999999999999998654 579999999999
Q ss_pred ecCC-----cccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcccc-eeeeeecccCccccCCcccchhHH
Q 012505 302 LKEN-----HWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAV-ELRLKIDQNHSDLKGGSFRDYGEA 375 (462)
Q Consensus 302 ~~~~-----~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~ 375 (462)
|+++ ...+||++++++++++|+..+ ++|++++++||+.|... ..+.++. |++ + ...
T Consensus 377 ~~~~~~~~~~~~~Dgi~aal~~le~~a~~g--------~~L~ell~~l~~~~g~~~~~~~~~~--~~~-------~-~k~ 438 (524)
T 2z0f_A 377 FLRFDGRPFSTDKDGILMGLLAAELMAKRG--------QAPDALYEALAEKLGRPYYARKDLP--VSP-------E-AKA 438 (524)
T ss_dssp ECCTTSCCSCSSCCHHHHHHHHHHHHHHHS--------SCHHHHHHHHHHHHCCCEEEEEEEE--CCH-------H-HHH
T ss_pred ECCCCcccccccchHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCcceeeeeccc--chH-------H-HHH
Confidence 9886 778999999999999887653 46999999999765332 3455555 665 2 234
Q ss_pred HHHHHHhhh---cCCCCCCC-C--------CccccceEEEEecCeEEEEeecCCCceeEEEEee-CCHHHHHHHHHHHHH
Q 012505 376 VLKHLENRV---DSDPKLQK-A--------PVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAA 442 (462)
Q Consensus 376 v~~~l~~~~---~~~~~~~~-~--------~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea-~~~~~a~~l~~~~~~ 442 (462)
+|+++++.. ....+..+ . ...+|| ||+.+++||++||||||||+||||+|+ .+++.++++.+.+.+
T Consensus 439 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~g~~~~~dG-lr~~~~~gwvlvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~~ 517 (524)
T 2z0f_A 439 RLARLSAKEVHPSTLAGEPVLQVLDRATGNGEPLGG-IKVVAANAWFAVRPSGTEDVAKVYAESFLGEAHLERVLEEATA 517 (524)
T ss_dssp HHTTCCTTTSCCSEETTEECCEEEEECTTTCCEEEE-EEEECSSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCChHHhCCceeEEEEeccCCCCCCCCe-EEEEECCeEEEEEcCCCCCEEEEEEEEeCCHHHHHHHHHHHHH
Confidence 666664420 00011101 1 123789 999988899999999999999999999 688889999988888
Q ss_pred HhhcCC
Q 012505 443 ATKEFP 448 (462)
Q Consensus 443 ~i~~~~ 448 (462)
.++.++
T Consensus 518 ~~~~~~ 523 (524)
T 2z0f_A 518 LLHKAL 523 (524)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887543
No 12
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=2.3e-72 Score=595.11 Aligned_cols=427 Identities=19% Similarity=0.174 Sum_probs=321.2
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCChhhhhhhhcccCCcccC-----CCCeEEEEcCCCCCC--C--CCeeeEEcCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFC-----PVDGAIMITASHLPY--N--RNGLKFFTNAG 68 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~---g~~ptP~~~~a~~~~~~~~~l-----~a~gGI~ITaSHnp~--~--~nGiK~~~~~G 68 (462)
+|+++++++|+++|++|+++ |.+|||+++|+++ ++ +|++||||||||||+ + |||||||+++|
T Consensus 73 ~~a~~~a~~l~a~Gi~V~~~~~~G~~pTP~l~fav~------~~n~~~~~a~~GImITASHNP~~~~~~~NGiK~~~~~G 146 (572)
T 1kfi_A 73 QAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIR------KVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTG 146 (572)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEGGGCBCHHHHHHHHH------HHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTS
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCCCChHHHHHHHH------HhccccCCcceEEEEeCCCCCCCcCcccCcEEEecCCC
Confidence 58999999999999999999 9999999999997 56 789999999999994 4 99999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhcccc---cccccCC--------------cceEEEccHHHHHHHHHHHHHhhcCCCCC
Q 012505 69 GLGKPDIKDILERAADIYKQFMVEGLT---NLEKQTS--------------TSIKRVDYMSVYTSDLVKAVRRAAGDIEK 131 (462)
Q Consensus 69 ~~~~~~~~~~ie~~~~~~~~~~~~~~~---~~~~~~~--------------~~i~~~~~~~~Y~~~l~~~~~~~~~~~~~ 131 (462)
.++++++++.|+........+...+.. ....... +.+...+..+.|++++.+.++...+....
T Consensus 147 ~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~Yi~~l~~~~~~~~i~~~l 226 (572)
T 1kfi_A 147 APAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLF 226 (572)
T ss_dssp SBCCHHHHHHHHHHHTTCCEEEECCCCGGGTCCTTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhhhcccccccccccccChhhccccccccccccccccceeecCcHHHHHHHHHHhcCHHHHhhhc
Confidence 999999888887754321111000000 0000011 12334478899999999876432210000
Q ss_pred CCCCcEEEEeCCCCCchHHHHHHHh-hcCCc-cccccccccCCCCCCCCCCCCcHHHHHHHHHHH-------HhcCCcEE
Q 012505 132 PLEGFHIVVDAGNGAGGFFAAKVLE-PLGAK-TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAV-------LDNKADLG 202 (462)
Q Consensus 132 ~~~~~kvvvd~~~G~~~~~~~~ll~-~lg~~-v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v-------~~~~adlg 202 (462)
..+++||||||+||+++.+++++|+ +|||+ ++ .+|+.|||.||++.|+|+. +.+..+.+.+ ++.++|+|
T Consensus 227 ~~~~lkIvvd~~nG~~~~~~~~il~~~lG~~~v~-~l~~~pD~~Fp~~~p~P~~-~~~~~L~~~v~~~~~~a~~~~aDlg 304 (572)
T 1kfi_A 227 SNKDFSFRFDGMHGVAGPYAKHIFGTLLGCSKES-LLNCDPSEDFGGGHPDPNL-TYAHDLVELLDIHKKKDVGTVPQFG 304 (572)
T ss_dssp TCTTCCEEEECTTSTHHHHHHHHHTTTTCCCGGG-EESCSCCTTGGGSCCCCST-TTTHHHHHHTTTTCCSCGGGSCSEE
T ss_pred ccCCCEEEEeCCCcchHHHHHHHHHHhCCCCeEE-EEecccCCCCCCCCCCCCc-hhHHHHHHHHhhhhccccccCCCeE
Confidence 1258999999999999999999998 99996 87 5899999999998888885 5577888888 89999999
Q ss_pred EeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC-CC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHH
Q 012505 203 IIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP-GT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEA 280 (462)
Q Consensus 203 ia~D~DgDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~-~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~ 280 (462)
+++||||||++++| +|++++++++++|++.+++...+ +. .||.+.+||. +++.+++++|+++++|+||||||.++|
T Consensus 305 iA~DgDaDR~~vvd-~G~~v~~~~~l~ll~~~~l~~~~~g~~~Vv~~~~ss~-~l~~ia~~~G~~~~~t~tG~k~i~~~m 382 (572)
T 1kfi_A 305 AACDGDADRNMILG-RQFFVTPSDSLAVIAANANLIFKNGLLGAARSMPTSG-ALDKVAAKNGIKLFETPTGWKFFGNLM 382 (572)
T ss_dssp EEECTTSCBEEEEE-TTEEECHHHHHHHHHHTHHHHSTTCCCCEEEETTSCT-HHHHHHHHHTCCEEEECSSTHHHHHHH
T ss_pred EeeCCCCceeEEee-CCeEecccHhHHHHHHHHHHHhcCCCcEEEEEeCchH-HHHHHHHHcCCeEEEeCCcHHHHHHHH
Confidence 99999999999999 89999999999999999887542 33 4776555665 667788899999999999999999999
Q ss_pred HHhcccCCcceeEeeeecceEecCCcccCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCcc-cceeeeeecc
Q 012505 281 IRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQ 359 (462)
Q Consensus 281 ~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~v~~ 359 (462)
.+.+ .+||||+|||+ ++++.+.+||+++++++|++|+..++ +++ +.++|+|++++|++.|. +...+..+..
T Consensus 383 ~~~~-----~~~ggEeSgg~-~~~~~~~kDgi~a~l~~le~la~~~~-~g~-~~~tL~ell~~l~~~yp~~~~~~~~~~~ 454 (572)
T 1kfi_A 383 DAGL-----INLCGEESFGT-GSNHIREKDGIWAVLAWLTILAHKNK-NTD-HFVTVEEIVTQYWQQFGRNYYSRYDYEQ 454 (572)
T ss_dssp HTTS-----CSEEEETTTEE-EETTSSSCCHHHHHHHHHHHHHHHTS-SCS-SCCCHHHHHHHHHHHHCEEEEEEEEEEE
T ss_pred hcCC-----cEEEEeccCCc-cccccCCCccHHHHHHHHHHHHHhcc-ccC-CCCCHHHHHHHHHHHcCceeEEeeeeec
Confidence 8644 46999999996 68889999999999999998877642 111 00269999999754321 1122333331
Q ss_pred cCccccCCcccchhHHHHHHHHhhhcC------CC---------CCCCCCccccceEEEEecC-eEEEEeecCCCc---e
Q 012505 360 NHSDLKGGSFRDYGEAVLKHLENRVDS------DP---------KLQKAPVNYEGQVRVSGSG-GWFLLRLSLHDP---V 420 (462)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~~~l~~~~~~------~~---------~~~~~~~~~dG~iki~~~~-~wvliRpSgTEP---~ 420 (462)
|++ +.+.++|++|++.... .. .....+..+|| ||+.+++ +|++|||||||| +
T Consensus 455 -~~~-------~~~~~im~~l~~~~~~~g~~~~v~~~~d~~~~~~~~~~i~~~dg-lr~~~~dg~wvlvRpSGTEP~~~~ 525 (572)
T 1kfi_A 455 -VDS-------AGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQSVSKNQG-VRFVFGDGSRIIFRLSGTGSVGAT 525 (572)
T ss_dssp -ECH-------HHHHHHHHHHHTTHHHHHTTSTTCEEEECCEECTTTCCEECCCC-EEEECTTSCEEEEEECSSCSSSEE
T ss_pred -CCH-------HHHHHHHHHHHhhhhhhCCceeEEEeecccccCcccCCCCCCCe-EEEEECCCeEEEEECCCCCCCCce
Confidence 554 4577999999874211 00 00113456799 9999766 599999999999 9
Q ss_pred eEEEEeeCCH----HHHHHHHHHHHHHhhcCCCCChhhHHHHH
Q 012505 421 LPLNIEAPSR----EDAVKLGLAVAAATKEFPALDTSALDKFV 459 (462)
Q Consensus 421 irvy~Ea~~~----~~a~~l~~~~~~~i~~~~~~~~~~~~~~~ 459 (462)
||||+|+.+. +.+++.++.+.+.+ +.+++|++|+
T Consensus 526 irvy~Ea~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 563 (572)
T 1kfi_A 526 IRIYFEQFEQQQIQHETATALANIIKLG-----LEISDIAQFT 563 (572)
T ss_dssp EEEEEEEEESSCCCSCHHHHHHHHHHHH-----HHHHCHHHHH
T ss_pred EEEEEEecCcchhHHHHHHHHHHHHHHH-----HHHhChHHHh
Confidence 9999999654 34445555555444 3566777776
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=2.4e-61 Score=507.55 Aligned_cols=373 Identities=17% Similarity=0.133 Sum_probs=269.4
Q ss_pred cCC-CCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHH---------------------HHHHHHHHHhhhhhhccccc-
Q 012505 40 FCP-VDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIK---------------------DILERAADIYKQFMVEGLTN- 96 (462)
Q Consensus 40 ~l~-a~gGI~ITaSHnp~~~nGiK~~~~~G~~~~~~~~---------------------~~ie~~~~~~~~~~~~~~~~- 96 (462)
+++ +++||||||||||++||||||++++|.+++++++ +.|+..... .+..+++..
T Consensus 53 ~~~~~~~GImITASHNP~~dNGiK~~~~~G~~l~~~~e~~~~~~an~~~~~~~~~~~~~~~I~~~i~~--~~~~~~~~~~ 130 (544)
T 2dka_A 53 YLQGKTVGVMITASHNPPEDNGVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEKNSLVEVIKN--LVSDLKIDLS 130 (544)
T ss_dssp HTTTCEEEEEECCC-CCTTEEEEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CTTBHHHHHHH--HHHHTTCCTT
T ss_pred hcCCcCceEEEeCCCCCcccCceeeecCCCCcCCHHHHHHHHHHhcccccccccccchHHHHHHHHHH--HHhhhcCCcc
Confidence 467 8999999999999999999999999999998877 333331110 011111100
Q ss_pred ---------ccccC--------------C-cc-eEEE---------------------c-cHHHHHHHHHHHHHhhcCCC
Q 012505 97 ---------LEKQT--------------S-TS-IKRV---------------------D-YMSVYTSDLVKAVRRAAGDI 129 (462)
Q Consensus 97 ---------~~~~~--------------~-~~-i~~~---------------------~-~~~~Y~~~l~~~~~~~~~~~ 129 (462)
..|.. . +. +..+ + ..+.|++++.+.+.......
T Consensus 131 ~~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~~ttP~l~~~v~~~~~~~~g~~~~~~Y~~~l~~~~~~~~~~~ 210 (544)
T 2dka_A 131 IPANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLNDPDFGKPTEDGYYSKLAKSFQEIYTIC 210 (544)
T ss_dssp SCEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHHHHHCGGGCCSSHHHHHHHHHHHHHHHHTC-
T ss_pred cCceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEecccccchheeeeeeccccccCCccHHHHHHHHHHHHHHHHhhh
Confidence 00111 0 21 2333 3 67799999999875321100
Q ss_pred CCCCCCcEEEEeCCCCCchHHHHHH-Hhhc--CCcccccccccc-CCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEee
Q 012505 130 EKPLEGFHIVVDAGNGAGGFFAAKV-LEPL--GAKTSGSQFLEP-DGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIF 205 (462)
Q Consensus 130 ~~~~~~~kvvvd~~~G~~~~~~~~l-l~~l--g~~v~~~~~~~~-d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~ 205 (462)
.++.+++||||||+||+++.+++++ |++| ||+++ .+|+.| ||.|+++.|+|+.+..+..+.+.+....+|+|+++
T Consensus 211 ~~~~~~lkIvvD~~nGag~~~~~~i~l~~L~~G~~v~-~ln~~~dd~~~~n~~~~~~~~~~~~~~~~~~~~~~aDlGiA~ 289 (544)
T 2dka_A 211 ESNNEKIDITIDAANGVGAPKIQELLEKYLHKEISFT-VVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPVNNKLYASF 289 (544)
T ss_dssp ----CCEEEEEECTTSTHHHHHHHHHHHHSTTTEEEE-EESCCTTCGGGTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEE
T ss_pred hccCCCCEEEEECCCcHHHHHHHHHHHHHhcCCceEE-EEcCcCCCCCcCCCCCCccchhhhhhhhhhhhcccccEEEEE
Confidence 1122479999999999999999999 9999 89998 699999 79999999988765544343333445678999999
Q ss_pred CCCCceeEEE--cCCC--ccccchhHHHHHHHHHHHhCC---------CCeEEEeccCChhHHHHHHHHcCCeEEEEecc
Q 012505 206 DTDVDRSAAV--DSTG--HELNRNRLIALMSAIVLEEHP---------GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRG 272 (462)
Q Consensus 206 D~DgDR~~~v--d~~G--~~l~~d~~~~Ll~~~~l~~~~---------~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G 272 (462)
||||||++++ |++| ++++||++++|+++++++..+ ..++|.+.++|+.+.+.+++++|+++++||||
T Consensus 290 DgDaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~~~~vv~tv~sn~~~~~~i~~~~G~~v~~t~vG 369 (544)
T 2dka_A 290 DGDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTG 369 (544)
T ss_dssp CTTSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCHHHHHHHHHTSCCCEEECCSS
T ss_pred CCCCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCcccccCCcEEEEeccccHHHHHHHHHcCCceEEEeCc
Confidence 9999999999 9999 689999999999999988643 23588777889889999987789999999999
Q ss_pred hHHHHHHHHHhcccCCcceeEeeeecc--eEecCCc------------------------------ccCcHHHHHHHHHH
Q 012505 273 YKNVIDEAIRLNSIGEESHLAIETSGH--GALKENH------------------------------WLDDGAYLMVKLLN 320 (462)
Q Consensus 273 ~k~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~~~------------------------------~~~Dgi~aa~~ll~ 320 (462)
|||++++|.+.+ +.+|||+||| ++|++++ ...||+..++++++
T Consensus 370 ~k~v~~~m~~~~-----~~~ggE~sGhg~~if~~~~~~~~~~~~~~~~~~kd~~~~~~~~~~l~a~~tgd~l~~~l~vl~ 444 (544)
T 2dka_A 370 VKHLHHEAENFD-----IGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLI 444 (544)
T ss_dssp HHHHHHHHTTSS-----EEEEECTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-----CcEEEcccCCeeEEECchhhhhhcccccCChhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHH
Confidence 999999998765 4699999999 8888763 45899988888888
Q ss_pred HHHHHHHcCCCCCcccHHHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhhhcCCCCCCCCCccccce
Q 012505 321 KLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGQ 400 (462)
Q Consensus 321 ~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG~ 400 (462)
.++..+ ++|+++++.+|.+... ..++. |++.. +..+++...... . .......+||
T Consensus 445 ~~~~~g--------~~lsel~~~~~~~p~~---~~~v~--v~~~~-------~~~~~~~~~~~~-~---~~~~~~~iDG- 499 (544)
T 2dka_A 445 VVHYLK--------LSPSDWDNEYTDLPNK---LVKVI--VPDRS-------IFKTTNAERTLV-E---PKGMQDEIDK- 499 (544)
T ss_dssp HHHHTT--------CCHHHHHTTSCCCCEE---EEEC----------------CCCCTTTC-CC-----CTTHHHHHHH-
T ss_pred HHHHhC--------CCHHHHHhhhhccCch---hhccc--cchhh-------hhhHHHhhhhhc-C---chhhhcccce-
Confidence 777653 4599999999885332 22344 55410 111121111100 0 0112345799
Q ss_pred EEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012505 401 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 445 (462)
Q Consensus 401 iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~ 445 (462)
+|+.+++||++||||||||++|||+||.|++.++++++.+.++|+
T Consensus 500 v~~~~~~gw~lvRpSGTEP~lRvy~Ea~~~e~~~~l~~~~~~~v~ 544 (544)
T 2dka_A 500 LVAQYPNGRSFVRASGTEDAVRVYAEADTQNNVEELSKAVSELVK 544 (544)
T ss_dssp HHTTSTTCEEEEEEC----CEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCEEEEEEcCCCCCEEEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 999888999999999999999999999999999999999998774
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=99.52 E-value=4.9e-16 Score=127.98 Aligned_cols=94 Identities=14% Similarity=0.046 Sum_probs=68.1
Q ss_pred HHHHhhccCCcccceeeeeecccCccccCCcccchhHHHHHHHHhh-hcCCCCCCCCCccccceEEEEecCeEEEEeecC
Q 012505 338 TDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENR-VDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSL 416 (462)
Q Consensus 338 s~ll~~lp~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~l~~~-~~~~~~~~~~~~~~dG~iki~~~~~wvliRpSg 416 (462)
.++++.+|.+... ..++. |++ +..+|+++.+. +.. .......+|| +|+.+++||++|||||
T Consensus 4 ~~l~~~~~~yp~~---~~nv~--v~~---------k~~v~~~~~e~~~~~---~~~~~~~idg-l~~~~~~gwvlvRpSG 65 (112)
T 1wjw_A 4 GSSGAIYVDLPNR---QLKVK--VAD---------RRVISTTDAERQAVT---PPGLQEAIND-LVKKYTLARAFVRPSG 65 (112)
T ss_dssp CCCCSCCCCCCEE---EEEEC--CCC---------SSSSTTSCCCCSSSS---STTHHHHHHH-HHHHSSSEEEEEECSS
T ss_pred hHHHHhhhhhcEe---eeEEE--cCC---------hhHHHHHHHHHhhcc---chhhhhhhhc-EEEEcCCcEEEEEeCC
Confidence 3556677775322 34555 665 12355555442 111 1123456899 9998888999999999
Q ss_pred CCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012505 417 HDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 449 (462)
Q Consensus 417 TEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~ 449 (462)
|||+||||+|+.+.+.++++++.+.+.|++++.
T Consensus 66 TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~~ 98 (112)
T 1wjw_A 66 TEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 98 (112)
T ss_dssp SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred CccEEEEEEEECCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988654
No 15
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=74.43 E-value=1.3 Score=45.80 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhC-CCcEEEeCCCChhhhhhhhc
Q 012505 2 LQDAVSRGITGA-GLDVVQYGLASTPAMFNSTL 33 (462)
Q Consensus 2 l~~a~a~gL~s~-Gi~V~~~g~~ptP~~~~a~~ 33 (462)
|.+|+++||.+. |++|.++|.++||+++|++.
T Consensus 148 l~~al~~gl~~~~G~~v~~~G~~ttP~l~~~v~ 180 (544)
T 2dka_A 148 LSMATIDGFQSVPNTKYQDFGLFTTPELHYVTR 180 (544)
T ss_dssp HHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHH
T ss_pred HHHHHHhhhhhhcCCeEEEecccccchheeeee
Confidence 678999999999 99999999999999999876
No 16
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=67.48 E-value=17 Score=30.46 Aligned_cols=65 Identities=12% Similarity=-0.040 Sum_probs=40.4
Q ss_pred cEEEEeCCCC--CchHHHHHHHhhcCCccccccccccCCCCCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 136 FHIVVDAGNG--AGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 136 ~kvvvd~~~G--~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
+||++-+-|+ .....+.+.|++.|.+|+. +.... . ++. -|..-..+.+.|.+..+|+||.+.|-|
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~-----~---~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGVEVID-KGTWS-----S---ERTDYPHYASQVALAVAGGEVDGGILICGTG 69 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTCEEEE-CCCCS-----S---SCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCCEEEE-eCCCC-----C---CCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 5788877776 3466788899999998863 22111 0 111 133335667777777777777666554
No 17
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=66.91 E-value=21 Score=29.49 Aligned_cols=82 Identities=20% Similarity=0.128 Sum_probs=54.8
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEe-----eCCCCce
Q 012505 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII-----FDTDVDR 211 (462)
Q Consensus 137 kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia-----~D~DgDR 211 (462)
+|||-..|+-=-.++..++.+++-.-..-+ + +|+..++-+..-++....-.+.-.+||+.|+ .=|.|.=
T Consensus 38 kIvV~t~N~kKf~vi~~il~~~~~~~i~~l--~----i~Tn~aDlTRmPA~~K~LmAvD~~dADlvIARGRLGvPGSGSm 111 (156)
T 3brc_A 38 RTVVPNWNAEKVDAINDVLRSFNLREAEHL--Q----FNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSL 111 (156)
T ss_dssp CEEECCCCHHHHHHHHHHHHHTTCCCCEEC--C----SCCGGGGGSSSHHHHHHHHHHHHHCCSEEEEEEECSSTTSCEE
T ss_pred eEEEecCCchHhHHHHHHHHHhcCCcccee--e----ccCcchhcccCcHHHHHHHheeccCCcEEEEcccccCCCCccE
Confidence 789988888888889999999854322111 1 2232222222233455555677889999998 4577777
Q ss_pred eEEEcCCCccccc
Q 012505 212 SAAVDSTGHELNR 224 (462)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (462)
+.+.|.+|+++++
T Consensus 112 LvimD~kGRiLta 124 (156)
T 3brc_A 112 LVIMDSRGRLLSA 124 (156)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEEcCCCcEEee
Confidence 7788999998875
No 18
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=65.75 E-value=12 Score=32.11 Aligned_cols=67 Identities=15% Similarity=0.038 Sum_probs=41.3
Q ss_pred CCcEEEEeCCCCCc--hHHHHHHHhhcCCccccccccccCCCCCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 134 EGFHIVVDAGNGAG--GFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 134 ~~~kvvvd~~~G~~--~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
.++||++-+-|+-. ...+.+.|++.|.+|+. +.... .++. .|..-..+.+.|.+..+|+||.+.|-|
T Consensus 19 ~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~--------~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 19 SHMKIGIGSDHGGYNLKREIADFLKKRGYEVID-FGTHG--------NESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp --CEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-CCCCS--------SSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CCCEEEEEeCchHHHHHHHHHHHHHHCCCEEEE-cCCCC--------CCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 56899998888642 44677788999998862 22111 1111 133345677788877777777766655
No 19
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=64.27 E-value=13 Score=31.10 Aligned_cols=65 Identities=15% Similarity=0.043 Sum_probs=39.0
Q ss_pred cEEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 136 FHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 136 ~kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
+||++-|-|+. -...+.+.|++.|.+|+. +.... .++. -|..-..+.+.|.+..+|+||.+.|-|
T Consensus 1 MkI~igsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~--------~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 68 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVID-FGTHG--------NESVDYPDFGLKVAEAVKSGECDRGIVICGTG 68 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-CCCCS--------SSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CEEEEEECchhHHHHHHHHHHHHHCCCEEEE-cCCCC--------CCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 36777777753 234677778899998862 21111 1111 133345677788877777777766555
No 20
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=63.34 E-value=19 Score=31.13 Aligned_cols=66 Identities=21% Similarity=0.252 Sum_probs=41.3
Q ss_pred cEEEEeCCCC---------Cch------------HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHH
Q 012505 136 FHIVVDAGNG---------AGG------------FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAV 194 (462)
Q Consensus 136 ~kvvvd~~~G---------~~~------------~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v 194 (462)
++||+|++|| +.+ ..+.+.|++.|++|... ..++..|.. . ...|.+-.+.+
T Consensus 2 m~IviDpGHGG~D~G~~~ga~g~~~Ekdi~l~ia~~l~~~L~~~G~~V~v~--ltR~d~~~~-----~-~~~L~~R~~~A 73 (180)
T 3qay_A 2 MKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRKEGHKVDVI--ICPEKQFKT-----K-NEEKSYKIPRV 73 (180)
T ss_dssp CEEEEEECCCBCTTSCBCSCBSSSBHHHHHHHHHHHHHHHHHHTTCEEEEE--CCCSSCCSS-----T-THHHHHHHHHH
T ss_pred eEEEEECCCCCCCCCCcCCCCCCccHHHHHHHHHHHHHHHHHhcCCcceEE--ECCCCCccc-----c-ccCHHHHHHHH
Confidence 6899999999 112 12456688889885101 122333321 1 13366667788
Q ss_pred HhcCCcEEEeeCCCC
Q 012505 195 LDNKADLGIIFDTDV 209 (462)
Q Consensus 195 ~~~~adlgia~D~Dg 209 (462)
.+.++|+-|.+=.|+
T Consensus 74 n~~~aDlfISIH~Na 88 (180)
T 3qay_A 74 NSGGYDLLIELHLNA 88 (180)
T ss_dssp HHSCCSEEEEEEEEC
T ss_pred HhcCCCEEEEeeeCC
Confidence 889999999876665
No 21
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=54.79 E-value=40 Score=30.03 Aligned_cols=110 Identities=7% Similarity=-0.092 Sum_probs=64.6
Q ss_pred CcEEEEeCCCCCch------HHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCC
Q 012505 135 GFHIVVDAGNGAGG------FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTD 208 (462)
Q Consensus 135 ~~kvvvd~~~G~~~------~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~D 208 (462)
++||++-+-|.... ..+.+.|++.|.+|+. ..+..... .+...-|..-..+.+.|.+..+|+||.+.|-
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~eV~D-~G~~s~~d----~~s~DYPd~a~~vA~~V~~g~~d~GIliCGT 77 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGYQLFN-YGMRGEEG----ESQLTYVQNGLMAAILLNTKAVDFVVTGCGT 77 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEE-CSCCSCTT----CCCCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHHHHHCCCEEEE-eCCCCCCC----CCCCChHHHHHHHHHHHHcCCCCeEEEEcCC
Confidence 48999988888443 4778888999998863 22110000 0001113334567777777777777776655
Q ss_pred CceeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEec
Q 012505 209 VDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKR 271 (462)
Q Consensus 209 gDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~ 271 (462)
|- ++.++. ++-++|.+-.++.+.......+++++.++.-.-
T Consensus 78 Gi-----------------G~sIAA-----NKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 78 GV-----------------GAMLAL-----NSFPGVVCGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp SH-----------------HHHHHH-----TTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred cH-----------------HHHHHh-----hcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 52 222221 122335566666666666666778888887765
No 22
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=52.49 E-value=30 Score=29.83 Aligned_cols=65 Identities=5% Similarity=-0.103 Sum_probs=40.4
Q ss_pred cEEEEeCCCCC--chHHHHHHHhh--cCCccccccccccCCCCCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 136 FHIVVDAGNGA--GGFFAAKVLEP--LGAKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 136 ~kvvvd~~~G~--~~~~~~~ll~~--lg~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
+||++-+-|+- -...+.+.|++ .|.+|+. +-... .++. .|..-..+.+.|.+..+|+||.+.|-|
T Consensus 23 MkIaIgsDhaG~~lK~~i~~~L~~~~~G~eV~D-~G~~s--------~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 92 (179)
T 3k7p_A 23 RRVAIGTDHPAFAIHENLILYVKEAGDEFVPVY-CGPKT--------AESVDYPDFASRVAEMVARKEVEFGVLAAGSG 92 (179)
T ss_dssp EEEEEEECTGGGGGHHHHHHHHHHTCTTEEEEE-CSCSS--------SSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred eEEEEEECchHHHHHHHHHHHHHhcCCCCeEEE-cCCCC--------CCCCCHHHHHHHHHHHHHcCCCCEEEEEccCc
Confidence 68999888864 34577788888 9988862 21111 1111 133335677788877777777766554
No 23
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=49.91 E-value=14 Score=31.52 Aligned_cols=67 Identities=18% Similarity=0.151 Sum_probs=39.9
Q ss_pred CcEEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 135 GFHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 135 ~~kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
++||++-|-|+. -...+.+.|++.|.+|+. +....+ . +...| ..-..+.+.|.+..+|+||.+.|-|
T Consensus 21 ~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~~-~-~~dYP-----d~a~~va~~V~~g~~d~GIliCGTG 89 (166)
T 3s5p_A 21 SMKVAFASDHGGRDLRMFLQQRASAHGYEVMD-LGTESD-A-SVDYP-----DFAKIGCEAVTSGRADCCILVCGTG 89 (166)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-EEC----------C-----HHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred ceEEEEEECchHHHHHHHHHHHHHHCCCEEEE-cCCCCC-C-CCCHH-----HHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 479999888864 244677788999999862 221110 0 11122 2234677788877777777766554
No 24
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=45.23 E-value=72 Score=26.80 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 134 EGFHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 134 ~~~kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
...||++-|-|+. -...+.+.|++.|.+|+. +- ++. .. ....|..-..+.+.|.+..+|+||.+.|-|
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D-~G--~~~---~~--~~dYpd~a~~va~~V~~g~~d~GIliCGTG 80 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNYLLGKGIEVED-HG--TYS---EE--SVDYPDYAKKVVQSILSNEADFGILLCGTG 80 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEE-CC--CCS---SS--CCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred cceeEEEeeCchHHHHHHHHHHHHHHCCCEEEE-eC--CCC---CC--CCChHHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 4578998887764 334677788899998862 22 111 00 001133345677778777777777766655
No 25
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=43.21 E-value=40 Score=29.19 Aligned_cols=69 Identities=7% Similarity=-0.039 Sum_probs=40.7
Q ss_pred CCcEEEEeCCCCC--chHHHHHHHhhcC--CccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 134 EGFHIVVDAGNGA--GGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 134 ~~~kvvvd~~~G~--~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
.++||++-|-|+- -...+.+.|++.| .+|+. +....+.. +. ..|..-..+.+.|.+..+|+||.+.|-|
T Consensus 28 ~~MkIaIgsDHaG~~LK~~i~~~L~~~G~g~eV~D-~G~~s~~e-~~-----DYPd~a~~vA~~V~~ge~d~GIliCGTG 100 (184)
T 3sgw_A 28 PPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITD-VGVTSTTD-KT-----AYPHVAIQAAQLIKDGKVDRALMICGTG 100 (184)
T ss_dssp CCEEEEEEECGGGHHHHHHHHHHHTTCTTEEEEEE-CSCCSTTC-CC-----CHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred CCcEEEEEECchhHHHHHHHHHHHHhCCCCcEEEE-cCCCCCCC-CC-----CHHHHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 4589999888864 3446677788888 67752 22110010 11 1133345677788877777777766554
No 26
>2jpi_A Hypothetical protein; alpha-helix/beta-sheet, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Pseudomonas aeruginosa}
Probab=41.84 E-value=76 Score=25.29 Aligned_cols=70 Identities=9% Similarity=0.019 Sum_probs=45.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCccccceEEEEecCeEEEEeecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012505 373 GEAVLKHLENRVDSDPKLQKAPVNYEGQVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 448 (462)
Q Consensus 373 ~~~v~~~l~~~~~~~~~~~~~~~~~dG~iki~~~~~wvliRpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~~ 448 (462)
-.+.+++|...+... ..+...++..+|.++.|- ++-+...-.+++.+||.+.+.+..+..-+...|..+-
T Consensus 35 asryl~qLc~H~~hK----~~ve~d~~~g~i~fp~G~--~~l~a~~~~L~i~v~A~d~e~L~~lk~VVa~HL~rFa 104 (118)
T 2jpi_A 35 AARYVNRLCKHWGHK----FEVELTPERGFIDFGDSN--CELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQRMA 104 (118)
T ss_dssp HHHHHHHHHHHTTTS----SEEEECSSEEEEECSSSC--EEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhh----CCceEcCCceEEEeCCeE--EEEEecCCeEEEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 357888887766442 122222222566665553 4445566688999999999999988888888887653
No 27
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=41.80 E-value=50 Score=29.75 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=39.4
Q ss_pred CCcEEEEeCCCCC-----ch--------------HHHHHHHhhcC-CccccccccccCCCCCCCCCCCCcHHHHHHHHHH
Q 012505 134 EGFHIVVDAGNGA-----GG--------------FFAAKVLEPLG-AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA 193 (462)
Q Consensus 134 ~~~kvvvd~~~G~-----~~--------------~~~~~ll~~lg-~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~ 193 (462)
.+++||+|++||- .+ ..+...|++.| ++|+- ...+..|. .|.+-.+.
T Consensus 3 ~~~~IviDpGHGG~D~Ga~g~~g~~Ek~~~l~ia~~l~~~L~~~g~~~V~~---tR~~D~~~----------~l~~R~~~ 69 (234)
T 3ne8_A 3 ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVAL---TRDSDIFL----------RLSERVKK 69 (234)
T ss_dssp CCEEEEEEECCBTTBCCCBCTTSCBHHHHHHHHHHHHHHHHHHSSSEEEEE---SCSSSCCC----------CHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEE---eCCCCCcC----------CHHHHHHH
Confidence 3679999999983 11 13344566666 76651 22222232 15566677
Q ss_pred HHhcCCcEEEeeCCCC
Q 012505 194 VLDNKADLGIIFDTDV 209 (462)
Q Consensus 194 v~~~~adlgia~D~Dg 209 (462)
+.+.++|+-|.+=.|+
T Consensus 70 An~~~adlfiSiH~Na 85 (234)
T 3ne8_A 70 AQEFDADLFISIHADT 85 (234)
T ss_dssp HHHTTCSEEEEEECCC
T ss_pred HHhhCCCEEEEEecCC
Confidence 7888999998887665
No 28
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=40.35 E-value=42 Score=28.44 Aligned_cols=67 Identities=10% Similarity=0.049 Sum_probs=40.0
Q ss_pred cEEEEeCCCCC--chHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012505 136 FHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 136 ~kvvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (462)
+||++-+-|+. ....+.+.|++.|.+|+. +-... .. |....+..-..+.+.|.+..+|+||.+.|-|
T Consensus 4 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~-----~~-~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 72 (162)
T 2vvp_A 4 MRVYLGADHAGYELKQRIIEHLKQTGHEPID-CGALR-----YD-ADDDYPAFCIAAATRTVADPGSLGIVLGGSG 72 (162)
T ss_dssp CEEEEEECHHHHHHHHHHHHHHHHTTCEEEE-CSCCS-----CC-TTCCHHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CEEEEEeCchhHHHHHHHHHHHHHCCCEEEE-eCCCC-----CC-CCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 57888777652 245677788999998862 21111 00 1111233345677778887777777766555
No 29
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=39.80 E-value=45 Score=30.64 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=37.9
Q ss_pred CcEEEEeCCCCCch-HH---HHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 135 GFHIVVDAGNGAGG-FF---AAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 135 ~~kvvvd~~~G~~~-~~---~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
++.|++||.|+.+. .+ ++..--.+|++ ++ +.|..||-... ..+..-.++.|..+.+.+++
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~i-E~H~~~d~al~-D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMV-EVHPEPEKALS-DSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEE-EBCSSGGGCSS-CTTTCBCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEE-EecCCccccCC-hhhcCCCHHHHHHHHHHHHH
Confidence 46788999999876 22 22223468998 77 46766666665 34444455666666666654
No 30
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=39.72 E-value=53 Score=27.63 Aligned_cols=23 Identities=30% Similarity=0.478 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+.+-|.+.|.+|.|+|.-.
T Consensus 26 lK~~i~~~L~~~G~eV~D~G~~~ 48 (155)
T 1o1x_A 26 LKEKVKNYLLGKGIEVEDHGTYS 48 (155)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCC
Confidence 78999999999999999998644
No 31
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=39.23 E-value=36 Score=31.76 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=36.1
Q ss_pred CcEEEEeCCCCC----------ch-----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHH
Q 012505 135 GFHIVVDAGNGA----------GG-----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 135 ~~kvvvd~~~G~----------~~-----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (462)
++.|++|+.|++ ++ ..++..--.+|++ ++ +.|.+||-..+ ..|..-.++.|+.+.+.++
T Consensus 195 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~I-E~H~~pd~al~-D~~~sl~p~el~~lv~~i~ 270 (285)
T 3sz8_A 195 GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFL-EAHPDPDRARC-DGPSALPLHQLEGLLSQMK 270 (285)
T ss_dssp SCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEE-EEESCGGGCSC-SSCCCEEGGGHHHHHHHHH
T ss_pred CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEE-EeccChhccCC-chhhccCHHHHHHHHHHHH
Confidence 478999999984 33 3445555678999 66 56777777776 3333333444555544444
No 32
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=37.10 E-value=41 Score=28.09 Aligned_cols=23 Identities=17% Similarity=0.462 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+.+-|.+.|++|.|+|.-.
T Consensus 14 lK~~i~~~L~~~G~eV~D~G~~~ 36 (149)
T 3he8_A 14 LKREIADFLKKRGYEVIDFGTHG 36 (149)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCS
T ss_pred HHHHHHHHHHHCCCEEEEcCCCC
Confidence 78999999999999999998654
No 33
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=35.50 E-value=11 Score=30.63 Aligned_cols=95 Identities=15% Similarity=0.082 Sum_probs=60.4
Q ss_pred CcEEEEeCCCCCchHHHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHH---HHhcCCcEEEeeCCCCce
Q 012505 135 GFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA---VLDNKADLGIIFDTDVDR 211 (462)
Q Consensus 135 ~~kvvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~---v~~~~adlgia~D~DgDR 211 (462)
...++++..+..+..-++..|.++|++|.. .+ ...|.|--+...|+ ..-+..+... ..+..+-+-+.-.+++-+
T Consensus 14 ~p~l~l~~~fdraW~rvg~ALdr~Gf~V~D-rd-rs~G~y~V~Y~~~~-~gf~~~lg~~~~~~~~~~Y~i~v~~~g~~t~ 90 (127)
T 2yh5_A 14 LPMLVVRGPFNVVWQRLPAALEKVGMKVTD-ST-RSQGNMAVTYKPLS-DSDWQELGASDPGLASGDYKLQVGDLDNRSS 90 (127)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTTEEEEE-EE-GGGTEEEEEECCCC-HHHHHHHTSCCCCCCSEEEEEEEEEETTEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHHhCCCeEEe-ee-ccCeEEEEEeCCCC-cchHHHhcCCCccCCCCCEEEEEEeCCCceE
Confidence 357788999999999999999999999862 33 33444433333333 2334443100 111233345555567888
Q ss_pred eEEEcCCCccccchhHHHHHH
Q 012505 212 SAAVDSTGHELNRNRLIALMS 232 (462)
Q Consensus 212 ~~~vd~~G~~l~~d~~~~Ll~ 232 (462)
+.+.|++|..++.+..-.|+.
T Consensus 91 V~v~d~~G~p~~~~~a~~ll~ 111 (127)
T 2yh5_A 91 LQFIDPKGHTLTQSQNDALVA 111 (127)
T ss_dssp EEEECTTSCBCCHHHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHHHH
Confidence 899999999999876555544
No 34
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=35.28 E-value=47 Score=27.75 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+.+-|.+.|++|.|+|.-+
T Consensus 15 lK~~i~~~L~~~G~eV~D~G~~~ 37 (149)
T 2vvr_A 15 LKHEIVAHLVERGVEVIDKGTWS 37 (149)
T ss_dssp GHHHHHHHHHHTTCEEEECCCCS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCC
Confidence 78999999999999999998643
No 35
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=34.83 E-value=41 Score=26.92 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=32.3
Q ss_pred EEEE--ecCe-EEEE-eecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012505 401 VRVS--GSGG-WFLL-RLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 447 (462)
Q Consensus 401 iki~--~~~~-wvli-RpSgTEP~irvy~Ea~~~~~a~~l~~~~~~~i~~~ 447 (462)
.|.. .+.. .+.| |-+.+|. =|.+.||.+.++|.++...++..+..+
T Consensus 67 ~K~s~k~P~~FKivV~k~~~~e~-KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 67 VKKSKRVPEHFKIFVRREGQDDI-KRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEECSSCTTEEEEEECCTTCSSC-EEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCcEEEEEEccCCCCc-ceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 5654 2333 3444 3245555 689999999999999999998877643
No 36
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=34.76 E-value=46 Score=28.38 Aligned_cols=23 Identities=17% Similarity=0.462 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+.+-|.+.|++|.|+|.-.
T Consensus 34 lK~~i~~~L~~~G~eV~D~G~~~ 56 (169)
T 3ph3_A 34 LKREIADFLKKRGYEVIDFGTHG 56 (169)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCS
T ss_pred HHHHHHHHHHHCCCEEEEcCCCC
Confidence 68999999999999999998654
No 37
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=33.70 E-value=1.3e+02 Score=26.64 Aligned_cols=108 Identities=15% Similarity=0.059 Sum_probs=62.9
Q ss_pred CcEEEEeCCCCCc-hH-----HHHHHHhhcCCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeeCCC
Q 012505 135 GFHIVVDAGNGAG-GF-----FAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTD 208 (462)
Q Consensus 135 ~~kvvvd~~~G~~-~~-----~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~D 208 (462)
.+||++-+-|+.. .. .+.+.|++.|.+|+. ....++. .. ...-|..-..+.+.|.+..+|+||.+.|-
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G~eV~D-~G~~~~~---~~--~~dYpd~a~~vA~~V~~g~~d~GIliCGT 76 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFN-VGMTDEN---DH--HLTYIHLGIMASILLNSKAVDFVVTGCGT 76 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEE-CSCSSTT---SS--CCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCCCEEEE-cCCCCCC---CC--CCCHHHHHHHHHHHHHcCCCCEEEEEcCC
Confidence 4789998888843 23 466778889998862 2210111 00 01113333566777877777777776655
Q ss_pred CceeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEe
Q 012505 209 VDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFK 270 (462)
Q Consensus 209 gDR~~~vd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~ 270 (462)
|- +..++. -..|| |.+..++++.......+++++.++.-+
T Consensus 77 Gi-----------------G~siaA---NKv~G--IRAAlc~d~~sA~laR~hNnANVL~lG 116 (214)
T 3ono_A 77 GQ-----------------GALMSC---NLHPG--VVCGYCLEPSDAFLFNQINNGNAISLA 116 (214)
T ss_dssp SH-----------------HHHHHH---HTSTT--CCEEECSSHHHHHHHHHHTCCSEEEEE
T ss_pred cH-----------------HHHHHH---hcCCC--eEEEEeCCHHHHHHHHHHcCCcEEEec
Confidence 52 222221 12333 555566666666667677888888766
No 38
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=32.31 E-value=33 Score=23.51 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=27.2
Q ss_pred ceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 419 PVLPLNIEAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 419 P~irvy~Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
|.|+|.+++.+.+.-++|.+.+.+.+.+.+..
T Consensus 1 P~I~I~~~grt~eqK~~L~~~it~~~~~~lg~ 32 (62)
T 3m20_A 1 PVLIVYGPKLDVGKKREFVERLTSVAAEIYGM 32 (62)
T ss_dssp CEEEEECSCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 78999998899999999999999888775544
No 39
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=32.23 E-value=55 Score=27.85 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLAS 24 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~p 24 (462)
||+.+.+-|.+.|++|.|+|.-.
T Consensus 35 lK~~i~~~L~~~G~eV~D~G~~~ 57 (166)
T 3s5p_A 35 LRMFLQQRASAHGYEVMDLGTES 57 (166)
T ss_dssp HHHHHHHHHHHTTCEEEEEEC--
T ss_pred HHHHHHHHHHHCCCEEEEcCCCC
Confidence 78999999999999999998543
No 40
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=30.62 E-value=82 Score=26.22 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCcEEEeCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLA 23 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~ 23 (462)
||+.+.+-|.+.|++|.|+|.-
T Consensus 21 lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 21 LRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp HHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEeCCC
Confidence 7899999999999999999864
No 41
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=30.08 E-value=79 Score=26.75 Aligned_cols=21 Identities=14% Similarity=0.368 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGL 22 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~ 22 (462)
||+.+.+-|.+.|++|.|+|.
T Consensus 17 lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 17 LKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp HHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEeCC
Confidence 689999999999999999984
No 42
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=28.40 E-value=85 Score=26.85 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=16.8
Q ss_pred HHHHHHHHHhcCCcEEEeeCCCC
Q 012505 187 MKAIIQAVLDNKADLGIIFDTDV 209 (462)
Q Consensus 187 l~~l~~~v~~~~adlgia~D~Dg 209 (462)
|.+-.+.+.+.++|+-|.+=.|+
T Consensus 61 L~~R~~~an~~~adlfiSiH~Na 83 (179)
T 1jwq_A 61 LKQRVKVAENLKANVFVSIHANS 83 (179)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEEC
T ss_pred HHHHHHHHHhhCCCEEEEEccCC
Confidence 55666778888999988875444
No 43
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=27.68 E-value=51 Score=22.11 Aligned_cols=32 Identities=25% Similarity=0.209 Sum_probs=26.4
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
|.++|++ ++.+.+.-++|.+.+.+.+.+.+..
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~lg~ 33 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSLDA 33 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 7889984 7789999999999999888875554
No 44
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=26.41 E-value=71 Score=29.43 Aligned_cols=57 Identities=21% Similarity=0.395 Sum_probs=31.3
Q ss_pred EEEEeCCCCC----------ch-----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHH
Q 012505 137 HIVVDAGNGA----------GG-----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (462)
Q Consensus 137 kvvvd~~~G~----------~~-----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (462)
.|++||.|+. ++ ..+....-.+|++ ++ +.|..||-.... .+..-.++.|..+.+.++
T Consensus 178 pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mI-E~H~~pd~al~D-g~qsl~p~~l~~l~~~i~ 251 (267)
T 2nwr_A 178 KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFM-ETHPEPEKALSD-ASTQLPLSQLEGIIEAIL 251 (267)
T ss_dssp EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEE-EEESCGGGCSSC-TTTCEEGGGHHHHHHHHH
T ss_pred CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEE-EecCCcccCCCc-cccCCCHHHHHHHHHHHH
Confidence 8999999994 33 2333333468886 44 456666655542 233333444555544444
No 45
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=24.90 E-value=68 Score=21.98 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=26.7
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPALD 451 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~~ 451 (462)
|.++|++ ++.+.+.-++|.+.+.+.+.+.+..+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg~p 34 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETLGTP 34 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 7788875 78999999999999999888755543
No 46
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.41 E-value=64 Score=21.53 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=26.4
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCC
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPAL 450 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~ 450 (462)
|.++|++ ++.+.+.-++|.+.+.+.+.+.+..
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg~ 33 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGA 33 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 7889985 7789999999999999888875554
No 47
>3czx_A Putative N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI, MCSG, protein structure initiative; 1.60A {Neisseria meningitidis MC58}
Probab=23.71 E-value=1.6e+02 Score=25.20 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=33.8
Q ss_pred cEEEEeCCCCC-----c-------------hHHHHHHHhhc-CCccccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 136 FHIVVDAGNGA-----G-------------GFFAAKVLEPL-GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 136 ~kvvvd~~~G~-----~-------------~~~~~~ll~~l-g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
.+||+|++||- . ...+...|++. |++|+- ...+..|. . |.+-.+.+.
T Consensus 4 ~~IvIDpGHGG~D~Ga~~~g~~Ekdi~l~ia~~l~~~L~~~~G~~V~~---tR~~d~~~------~----L~~R~~~an- 69 (182)
T 3czx_A 4 KIICLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDYGLTVKT---DGTGKGNM------P----LRDAVKLIR- 69 (182)
T ss_dssp CCEEEEECCCSSSCCCEETTEEHHHHHHHHHHHHHHHHHHHHCCCEEE---SCSSCCCC------C----HHHHHHHHH-
T ss_pred CEEEEECCCCCCCCCccCCCccHHHHHHHHHHHHHHHHhhcCCcEEEE---ecCCCccC------C----HHHHHHHhh-
Confidence 47999999973 1 11344557777 998762 22222221 1 233333343
Q ss_pred cCCcEEEeeCCCC
Q 012505 197 NKADLGIIFDTDV 209 (462)
Q Consensus 197 ~~adlgia~D~Dg 209 (462)
++|+-|.+=.|+
T Consensus 70 -~adlfISIH~Na 81 (182)
T 3czx_A 70 -GSDVAIEFHTNA 81 (182)
T ss_dssp -TCSEEEEECCBC
T ss_pred -CCCEEEEeccCC
Confidence 899988876665
No 48
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=23.49 E-value=42 Score=31.19 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=37.4
Q ss_pred CcEEEEeCCCCCch----HHHHHHHhhcCCc--cccccccccCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 012505 135 GFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (462)
Q Consensus 135 ~~kvvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (462)
++.|++||.|+.+. ..++..--.+|++ ++ +.|..||-... ..+..-+++.|..+.+.+++
T Consensus 207 ~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~I-E~H~~~d~a~~-D~~~sl~p~~~~~lv~~i~~ 272 (276)
T 1vs1_A 207 HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIV-EVHPNPEEALS-DAKQQLTPGEFARLMGELRW 272 (276)
T ss_dssp SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEE-EBCSSGGGCSS-CGGGCBCHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEE-EecCCcccCCC-chhcCCCHHHHHHHHHHHHH
Confidence 45688999998774 3444444568998 66 46666666554 33444445556666665554
No 49
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=22.79 E-value=1.1e+02 Score=23.32 Aligned_cols=29 Identities=7% Similarity=0.103 Sum_probs=25.2
Q ss_pred CceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012505 418 DPVLPLNIEAPSREDAVKLGLAVAAATKE 446 (462)
Q Consensus 418 EP~irvy~Ea~~~~~a~~l~~~~~~~i~~ 446 (462)
-|..|+-+.+.|.+.+++.++...+.+.+
T Consensus 51 aP~Y~i~~~~~D~k~ge~~L~~ai~~i~~ 79 (93)
T 2qn6_B 51 APRYRVDVVGTNPKEASEALNQIISNLIK 79 (93)
T ss_dssp TTEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCHHHHHHHHHHHHHHHHH
Confidence 39999999999999999999887776655
No 50
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=22.00 E-value=1.5e+02 Score=23.49 Aligned_cols=51 Identities=10% Similarity=0.227 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012505 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (462)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~Ll~~~ 234 (462)
..+.+.+.+.+...+.+|=|.+|.+.+|+.+ +|. +| +-+.+++++.|.+.+
T Consensus 41 ~~av~~lN~~~~~~n~~L~F~vdee~~~~vVkVvD~~TgEVIRqIPpEe~L~l~~~l 97 (117)
T 2hc5_A 41 AEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAM 97 (117)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCChHHHHHHHHHH
Confidence 3455666777777888999999999999876 464 57 457788888887765
No 51
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=21.63 E-value=67 Score=28.57 Aligned_cols=22 Identities=18% Similarity=0.520 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCcEEEeCCC
Q 012505 2 LQDAVSRGITGAGLDVVQYGLA 23 (462)
Q Consensus 2 l~~a~a~gL~s~Gi~V~~~g~~ 23 (462)
+++.+.+-|.+.|++|.|+|.-
T Consensus 21 lk~~i~~~L~~~G~eV~D~G~~ 42 (216)
T 2ppw_A 21 IYDSLKEATDKKGYQLFNYGMR 42 (216)
T ss_dssp HHHHHHHHHHHHTCEEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEeCCC
Confidence 5689999999999999999865
No 52
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=21.39 E-value=76 Score=22.75 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=27.3
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012505 419 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPALD 451 (462)
Q Consensus 419 P~irvy~-Ea~~~~~a~~l~~~~~~~i~~~~~~~ 451 (462)
|.++|++ ++.+.+.-++|.+.+.+.+.+.+..+
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~~lg~p 35 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISEATGEP 35 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHCcC
Confidence 8899987 78999999999999999887755443
No 53
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=20.61 E-value=69 Score=28.76 Aligned_cols=23 Identities=22% Similarity=0.439 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCC
Q 012505 1 MLQDAVSRGITGAGLDVVQYGLA 23 (462)
Q Consensus 1 ~l~~a~a~gL~s~Gi~V~~~g~~ 23 (462)
+||+.+.+-|.+.|++|.|+|.-
T Consensus 36 ~lKe~i~~~L~~~G~eV~D~G~~ 58 (231)
T 3c5y_A 36 VVHEALTTVAEPLGHKVFNYGMY 58 (231)
T ss_dssp HHHHHHHHHHGGGTCEEEECCCC
T ss_pred HHHHHHHHHHHHCCCEEEEeCCC
Confidence 37899999999999999999865
Done!