Query 012506
Match_columns 462
No_of_seqs 210 out of 1833
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 03:21:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012506.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012506hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1389 3-oxoacyl CoA thiolase 100.0 2E-103 4E-108 746.0 28.8 434 4-450 1-435 (435)
2 PLN02287 3-ketoacyl-CoA thiola 100.0 2.6E-85 5.6E-90 683.2 45.4 452 1-456 1-452 (452)
3 PRK08242 acetyl-CoA acetyltran 100.0 7.2E-79 1.6E-83 626.7 41.9 376 50-438 2-401 (402)
4 PRK06025 acetyl-CoA acetyltran 100.0 1.2E-77 2.6E-82 615.3 40.9 379 50-438 2-416 (417)
5 PRK07850 acetyl-CoA acetyltran 100.0 2.3E-77 5.1E-82 614.9 41.6 379 50-438 2-386 (387)
6 PRK13359 beta-ketoadipyl CoA t 100.0 1.2E-76 2.7E-81 610.8 40.0 380 50-438 2-399 (400)
7 PRK09052 acetyl-CoA acetyltran 100.0 4.7E-76 1E-80 607.2 42.4 391 46-438 2-398 (399)
8 PRK07108 acetyl-CoA acetyltran 100.0 3.8E-76 8.2E-81 606.9 39.8 385 50-438 2-391 (392)
9 PRK06366 acetyl-CoA acetyltran 100.0 1.9E-76 4.1E-81 609.4 37.5 371 50-439 2-387 (388)
10 PRK09051 beta-ketothiolase; Pr 100.0 9.5E-76 2.1E-80 604.3 41.4 382 49-439 2-394 (394)
11 PRK06504 acetyl-CoA acetyltran 100.0 1E-75 2.2E-80 602.5 41.1 380 50-438 2-389 (390)
12 PRK07661 acetyl-CoA acetyltran 100.0 8E-76 1.7E-80 604.3 40.1 384 50-438 2-390 (391)
13 TIGR02445 fadA fatty oxidation 100.0 1.8E-75 3.8E-80 600.7 39.4 379 51-438 1-384 (385)
14 PRK09050 beta-ketoadipyl CoA t 100.0 1.8E-75 4E-80 602.7 39.6 381 50-438 2-400 (401)
15 PRK08235 acetyl-CoA acetyltran 100.0 1.9E-75 4.1E-80 602.3 39.6 380 50-438 2-392 (393)
16 PRK06205 acetyl-CoA acetyltran 100.0 4.3E-75 9.3E-80 602.3 41.5 381 50-439 2-403 (404)
17 KOG1390 Acetyl-CoA acetyltrans 100.0 7.2E-77 1.6E-81 566.6 25.3 380 48-438 4-395 (396)
18 PRK06633 acetyl-CoA acetyltran 100.0 2.3E-75 5.1E-80 599.4 37.0 379 50-438 3-391 (392)
19 TIGR02430 pcaF beta-ketoadipyl 100.0 5.3E-75 1.1E-79 598.7 38.2 380 51-438 2-399 (400)
20 PRK08947 fadA 3-ketoacyl-CoA t 100.0 1.2E-74 2.6E-79 595.2 40.8 380 50-438 2-386 (387)
21 PRK08963 fadI 3-ketoacyl-CoA t 100.0 1.5E-74 3.2E-79 601.7 38.9 378 50-439 5-428 (428)
22 PRK05656 acetyl-CoA acetyltran 100.0 4.8E-74 1E-78 592.4 41.6 380 50-439 2-393 (393)
23 PRK08131 acetyl-CoA acetyltran 100.0 5.4E-74 1.2E-78 591.8 40.5 382 50-439 2-400 (401)
24 TIGR02446 FadI fatty oxidation 100.0 4.9E-74 1.1E-78 596.6 39.4 379 49-439 6-430 (430)
25 PRK06445 acetyl-CoA acetyltran 100.0 7.8E-74 1.7E-78 591.4 39.9 380 50-439 2-394 (394)
26 PRK06954 acetyl-CoA acetyltran 100.0 3.2E-73 7E-78 586.8 39.7 378 50-438 7-396 (397)
27 KOG1391 Acetyl-CoA acetyltrans 100.0 4.7E-74 1E-78 533.5 26.3 381 50-439 4-395 (396)
28 PRK08170 acetyl-CoA acetyltran 100.0 1.5E-72 3.3E-77 586.7 38.6 376 49-438 2-425 (426)
29 PRK09268 acetyl-CoA acetyltran 100.0 4.6E-72 9.9E-77 581.8 39.6 372 49-438 6-427 (427)
30 PRK05790 putative acyltransfer 100.0 7.7E-71 1.7E-75 569.6 41.8 381 50-439 2-393 (393)
31 PRK06690 acetyl-CoA acetyltran 100.0 5.2E-70 1.1E-74 553.7 37.9 358 51-439 2-360 (361)
32 PRK07851 acetyl-CoA acetyltran 100.0 6.3E-69 1.4E-73 556.0 38.8 378 50-439 2-405 (406)
33 PLN02644 acetyl-CoA C-acetyltr 100.0 4.8E-68 1E-72 548.0 40.9 380 51-440 2-394 (394)
34 PRK07801 acetyl-CoA acetyltran 100.0 3.4E-67 7.3E-72 540.3 38.8 368 50-438 2-381 (382)
35 cd00751 thiolase Thiolase are 100.0 5.9E-67 1.3E-71 539.5 38.8 376 53-438 1-386 (386)
36 TIGR01930 AcCoA-C-Actrans acet 100.0 3E-66 6.5E-71 533.7 38.3 374 54-437 1-386 (386)
37 COG0183 PaaJ Acetyl-CoA acetyl 100.0 1.1E-61 2.3E-66 499.3 23.4 377 49-439 1-392 (392)
38 PRK06157 acetyl-CoA acetyltran 100.0 2.5E-59 5.3E-64 483.8 37.0 336 50-427 7-383 (398)
39 PRK06059 lipid-transfer protei 100.0 1.4E-59 3.1E-64 486.4 34.1 349 49-438 3-399 (399)
40 PRK06365 acetyl-CoA acetyltran 100.0 9.8E-59 2.1E-63 482.7 35.8 350 48-439 14-429 (430)
41 PRK12578 acetyl-CoA acetyltran 100.0 2.2E-58 4.8E-63 475.5 35.7 347 50-437 1-384 (385)
42 PTZ00455 3-ketoacyl-CoA thiola 100.0 3.6E-58 7.7E-63 478.5 36.3 352 50-429 12-427 (438)
43 PRK08256 lipid-transfer protei 100.0 4.1E-58 8.9E-63 474.3 33.6 331 51-424 2-376 (391)
44 cd00826 nondecarbox_cond_enzym 100.0 5E-58 1.1E-62 473.1 33.0 348 55-437 1-392 (393)
45 PRK06289 acetyl-CoA acetyltran 100.0 6E-58 1.3E-62 474.7 33.1 353 50-436 3-399 (403)
46 PRK08313 acetyl-CoA acetyltran 100.0 9.3E-57 2E-61 462.8 37.1 349 49-440 2-385 (386)
47 PRK07516 acetyl-CoA acetyltran 100.0 3.8E-57 8.3E-62 466.8 34.0 347 50-439 2-388 (389)
48 PRK06064 acetyl-CoA acetyltran 100.0 1.1E-56 2.4E-61 463.6 35.7 347 50-438 2-387 (389)
49 cd00829 SCP-x_thiolase Thiolas 100.0 2.1E-56 4.5E-61 459.5 34.3 329 55-425 1-364 (375)
50 PRK06065 acetyl-CoA acetyltran 100.0 5E-56 1.1E-60 457.0 36.5 337 50-429 9-382 (392)
51 PRK06066 acetyl-CoA acetyltran 100.0 7.7E-56 1.7E-60 453.6 36.3 347 48-438 2-385 (385)
52 PRK06158 thiolase; Provisional 100.0 4.8E-56 1E-60 457.4 34.7 343 50-439 8-381 (384)
53 KOG1392 Acetyl-CoA acetyltrans 100.0 6.1E-57 1.3E-61 424.7 15.1 381 46-440 38-464 (465)
54 PRK08142 acetyl-CoA acetyltran 100.0 3.1E-54 6.7E-59 443.1 34.9 331 50-427 5-372 (388)
55 PRK07937 lipid-transfer protei 100.0 6.7E-52 1.5E-56 420.4 35.5 326 50-426 2-336 (352)
56 PRK07855 lipid-transfer protei 100.0 2E-51 4.3E-56 422.9 35.4 337 50-436 4-385 (386)
57 PF00108 Thiolase_N: Thiolase, 100.0 1.7E-51 3.7E-56 402.9 24.1 252 49-307 1-264 (264)
58 PRK08257 acetyl-CoA acetyltran 100.0 1.4E-49 3E-54 420.1 36.2 349 49-440 3-399 (498)
59 KOG1406 Peroxisomal 3-ketoacyl 100.0 9.3E-50 2E-54 372.3 11.4 335 50-425 6-385 (408)
60 PF02803 Thiolase_C: Thiolase, 100.0 1.2E-32 2.6E-37 237.3 11.3 123 314-438 1-123 (123)
61 cd00327 cond_enzymes Condensin 100.0 1.6E-28 3.5E-33 238.3 20.8 236 73-436 5-254 (254)
62 TIGR03150 fabF beta-ketoacyl-a 100.0 5.9E-28 1.3E-32 250.8 23.5 272 75-436 71-406 (407)
63 PRK07314 3-oxoacyl-(acyl carri 100.0 1.5E-27 3.2E-32 248.3 24.7 276 74-439 71-410 (411)
64 PRK06333 3-oxoacyl-(acyl carri 100.0 4.2E-27 9E-32 246.0 23.7 272 75-439 82-422 (424)
65 PTZ00050 3-oxoacyl-acyl carrie 99.9 7.6E-26 1.7E-30 236.1 27.5 277 71-438 73-420 (421)
66 PRK14691 3-oxoacyl-(acyl carri 99.9 5E-25 1.1E-29 223.1 25.1 272 75-439 4-340 (342)
67 cd00825 decarbox_cond_enzymes 99.9 5.1E-25 1.1E-29 222.2 22.7 275 51-436 1-332 (332)
68 PLN02836 3-oxoacyl-[acyl-carri 99.9 1.8E-24 3.8E-29 226.8 25.7 274 74-439 92-436 (437)
69 PRK08722 3-oxoacyl-(acyl carri 99.9 2.3E-24 5E-29 224.3 24.1 271 76-438 75-413 (414)
70 KOG1394 3-oxoacyl-(acyl-carrie 99.9 2.2E-25 4.7E-30 217.0 13.1 246 74-413 93-384 (440)
71 COG0304 FabB 3-oxoacyl-(acyl-c 99.9 9.2E-24 2E-28 217.1 25.4 274 73-439 69-411 (412)
72 smart00825 PKS_KS Beta-ketoacy 99.9 1.6E-24 3.4E-29 226.4 19.7 269 75-438 87-423 (424)
73 cd00834 KAS_I_II Beta-ketoacyl 99.9 1.3E-23 2.9E-28 218.0 25.3 273 74-436 70-406 (406)
74 PLN02787 3-oxoacyl-[acyl-carri 99.9 2E-23 4.3E-28 222.2 26.9 269 77-439 201-539 (540)
75 COG0332 FabH 3-oxoacyl-[acyl-c 99.9 4E-24 8.7E-29 212.5 19.2 264 50-437 30-320 (323)
76 PRK07103 polyketide beta-ketoa 99.9 1.2E-23 2.6E-28 218.9 23.5 274 75-438 80-410 (410)
77 PRK07910 3-oxoacyl-(acyl carri 99.9 7.6E-23 1.7E-27 213.1 26.6 270 76-438 84-417 (418)
78 PRK05952 3-oxoacyl-(acyl carri 99.9 5.5E-23 1.2E-27 211.4 24.4 261 77-438 58-381 (381)
79 cd00828 elong_cond_enzymes "el 99.9 1.2E-22 2.6E-27 211.1 22.9 271 74-436 71-407 (407)
80 PRK06501 3-oxoacyl-(acyl carri 99.9 1.5E-21 3.3E-26 203.9 26.8 232 115-440 154-424 (425)
81 PRK09116 3-oxoacyl-(acyl carri 99.9 1.3E-21 2.8E-26 203.2 25.3 266 75-436 73-404 (405)
82 cd00832 CLF Chain-length facto 99.9 1.1E-21 2.3E-26 203.5 24.4 266 75-436 71-399 (399)
83 PRK08439 3-oxoacyl-(acyl carri 99.9 1.2E-21 2.5E-26 203.7 24.6 268 75-438 72-405 (406)
84 PRK06519 3-oxoacyl-(acyl carri 99.9 4.6E-21 1E-25 198.0 27.5 234 75-413 73-357 (398)
85 cd00833 PKS polyketide synthas 99.9 4.6E-21 1E-25 199.8 23.8 246 74-414 86-366 (421)
86 PRK06147 3-oxoacyl-(acyl carri 99.9 4.4E-21 9.4E-26 195.4 22.7 265 72-441 62-345 (348)
87 CHL00203 fabH 3-oxoacyl-acyl-c 99.9 2.1E-21 4.5E-26 196.2 19.7 255 58-437 35-323 (326)
88 PRK07967 3-oxoacyl-(acyl carri 99.9 1.2E-20 2.6E-25 195.8 24.9 269 75-440 71-405 (406)
89 PLN02326 3-oxoacyl-[acyl-carri 99.9 2.2E-20 4.7E-25 192.6 21.6 273 40-435 36-375 (379)
90 PRK09352 3-oxoacyl-(acyl carri 99.9 2.6E-20 5.5E-25 187.4 20.7 254 59-436 37-316 (319)
91 TIGR00748 HMG_CoA_syn_Arc hydr 99.9 4.7E-20 1E-24 187.8 21.1 247 71-445 46-314 (345)
92 PRK07204 3-oxoacyl-(acyl carri 99.8 5.2E-20 1.1E-24 186.1 20.5 241 72-434 49-324 (329)
93 PRK09258 3-oxoacyl-(acyl carri 99.8 3.1E-20 6.7E-25 188.4 18.5 266 55-433 47-332 (338)
94 TIGR00747 fabH 3-oxoacyl-(acyl 99.8 8.8E-20 1.9E-24 183.5 21.4 251 59-432 36-311 (318)
95 PRK12879 3-oxoacyl-(acyl carri 99.8 1.8E-19 3.9E-24 181.7 21.7 244 71-436 49-322 (325)
96 PRK06816 3-oxoacyl-(acyl carri 99.8 1.5E-19 3.3E-24 186.2 21.0 97 72-170 60-156 (378)
97 cd00830 KAS_III Ketoacyl-acyl 99.8 6.8E-20 1.5E-24 184.1 17.9 240 71-432 46-315 (320)
98 PRK04262 hypothetical protein; 99.8 3.2E-19 6.9E-24 181.8 22.2 247 71-445 47-315 (347)
99 TIGR02813 omega_3_PfaA polyket 99.8 5E-19 1.1E-23 214.0 26.2 228 115-439 185-462 (2582)
100 PRK12880 3-oxoacyl-(acyl carri 99.8 4.8E-19 1E-23 180.8 20.7 243 71-439 56-338 (353)
101 cd00827 init_cond_enzymes "ini 99.8 3.1E-19 6.7E-24 179.6 18.9 234 53-409 32-299 (324)
102 PRK07515 3-oxoacyl-(acyl carri 99.8 1.6E-19 3.4E-24 185.8 17.0 243 74-437 94-370 (372)
103 PRK05963 3-oxoacyl-(acyl carri 99.8 2.6E-18 5.5E-23 173.6 20.0 244 71-436 48-324 (326)
104 PRK06840 hypothetical protein; 99.8 1E-17 2.2E-22 170.2 21.4 247 71-438 49-334 (339)
105 PRK09185 3-oxoacyl-(acyl carri 99.8 1E-17 2.2E-22 173.4 20.1 216 115-439 139-391 (392)
106 cd00831 CHS_like Chalcone and 99.8 6.1E-18 1.3E-22 173.3 17.2 250 73-435 83-359 (361)
107 COG3321 Polyketide synthase mo 99.7 1.6E-16 3.4E-21 181.6 24.2 266 78-440 94-428 (1061)
108 PLN03169 chalcone synthase fam 99.7 2.7E-17 5.8E-22 170.0 14.0 250 72-433 103-382 (391)
109 PLN03171 chalcone synthase-lik 99.7 1.1E-16 2.3E-21 165.9 15.9 253 73-438 106-394 (399)
110 PLN03168 chalcone synthase; Pr 99.7 2.5E-15 5.3E-20 155.2 19.8 254 74-437 100-384 (389)
111 PLN02854 3-ketoacyl-CoA syntha 99.7 6.2E-15 1.3E-19 155.3 23.0 94 75-170 188-282 (521)
112 PLN03170 chalcone synthase; Pr 99.7 4.9E-16 1.1E-20 160.9 14.2 256 75-440 106-392 (401)
113 PLN03172 chalcone synthase fam 99.7 2E-15 4.4E-20 155.9 18.5 254 75-438 102-386 (393)
114 PLN03173 chalcone synthase; Pr 99.6 3.8E-15 8.3E-20 153.7 17.0 247 75-432 102-379 (391)
115 TIGR01835 HMG-CoA-S_prok 3-hyd 99.6 1.5E-14 3.3E-19 149.1 21.1 111 51-168 29-139 (379)
116 PLN02377 3-ketoacyl-CoA syntha 99.6 3.1E-14 6.8E-19 149.9 22.5 96 73-170 170-266 (502)
117 TIGR02845 spore_V_AD stage V s 99.6 9.3E-14 2E-18 137.1 20.0 91 72-170 47-137 (327)
118 PLN02932 3-ketoacyl-CoA syntha 99.5 1.5E-13 3.2E-18 144.0 17.5 94 75-170 148-242 (478)
119 COG3425 PksG 3-hydroxy-3-methy 99.5 4.7E-13 1E-17 134.3 20.2 234 71-430 47-301 (377)
120 PLN02577 hydroxymethylglutaryl 99.5 2.1E-13 4.6E-18 142.5 17.7 110 54-169 36-150 (459)
121 PLN02192 3-ketoacyl-CoA syntha 99.5 2.8E-13 6E-18 142.6 17.5 94 75-170 176-270 (511)
122 PRK08304 stage V sporulation p 99.5 1.2E-12 2.6E-17 129.7 20.0 91 72-170 53-143 (337)
123 TIGR01833 HMG-CoA-S_euk 3-hydr 99.4 4.1E-11 8.9E-16 125.3 19.5 108 54-167 33-145 (454)
124 PLN00415 3-ketoacyl-CoA syntha 99.3 5.3E-11 1.2E-15 123.7 16.9 95 74-170 132-228 (466)
125 PRK12404 stage V sporulation p 99.3 1.5E-10 3.3E-15 114.2 18.9 85 73-165 52-136 (334)
126 KOG1202 Animal-type fatty acid 99.2 1.7E-10 3.7E-15 126.5 12.9 236 75-413 87-360 (2376)
127 PF00109 ketoacyl-synt: Beta-k 99.2 3.3E-10 7E-15 110.1 12.9 92 75-168 87-206 (254)
128 COG3424 BcsA Predicted naringe 99.1 4.9E-09 1.1E-13 101.7 16.2 247 75-435 76-348 (356)
129 PF08392 FAE1_CUT1_RppA: FAE1/ 98.6 6.4E-07 1.4E-11 87.8 11.8 94 75-170 83-177 (290)
130 PF07451 SpoVAD: Stage V sporu 98.3 1.1E-05 2.3E-10 79.0 14.0 84 76-167 52-135 (329)
131 PF02801 Ketoacyl-synt_C: Beta 98.3 1.3E-06 2.8E-11 75.3 7.0 97 317-413 1-110 (119)
132 PF08541 ACP_syn_III_C: 3-Oxoa 98.2 2.9E-06 6.4E-11 69.2 6.8 87 345-436 1-87 (90)
133 PF00195 Chal_sti_synt_N: Chal 98.1 1.9E-05 4.1E-10 75.4 9.9 95 74-170 99-194 (226)
134 PF01154 HMG_CoA_synt_N: Hydro 98.0 1.5E-05 3.2E-10 72.7 7.7 96 71-167 49-148 (174)
135 COG0183 PaaJ Acetyl-CoA acetyl 98.0 2.2E-06 4.7E-11 89.0 2.1 112 246-380 187-312 (392)
136 PF08545 ACP_syn_III: 3-Oxoacy 97.2 0.00052 1.1E-08 54.7 4.3 39 132-170 1-39 (80)
137 PF08392 FAE1_CUT1_RppA: FAE1/ 95.5 0.033 7.2E-07 55.0 6.8 68 338-413 88-161 (290)
138 PLN02932 3-ketoacyl-CoA syntha 94.8 0.1 2.2E-06 55.5 8.3 69 338-414 153-227 (478)
139 cd00327 cond_enzymes Condensin 94.0 0.38 8.2E-06 46.2 9.9 94 338-442 12-115 (254)
140 PLN02377 3-ketoacyl-CoA syntha 93.9 0.19 4.1E-06 53.8 8.0 69 338-414 177-251 (502)
141 PLN02192 3-ketoacyl-CoA syntha 93.8 0.26 5.7E-06 52.8 8.9 75 338-421 181-261 (511)
142 PRK06158 thiolase; Provisional 93.3 0.51 1.1E-05 49.0 9.9 98 317-423 9-110 (384)
143 PLN02854 3-ketoacyl-CoA syntha 93.1 0.4 8.6E-06 51.6 8.8 69 338-414 193-267 (521)
144 PF00195 Chal_sti_synt_N: Chal 92.3 0.19 4E-06 48.2 4.6 43 338-380 105-151 (226)
145 PF08541 ACP_syn_III_C: 3-Oxoa 92.0 0.17 3.7E-06 40.9 3.4 73 87-167 1-79 (90)
146 PLN03169 chalcone synthase fam 91.8 0.6 1.3E-05 48.6 8.0 70 338-413 111-184 (391)
147 PRK08313 acetyl-CoA acetyltran 91.7 0.95 2E-05 47.0 9.5 96 318-423 5-111 (386)
148 PLN03168 chalcone synthase; Pr 91.1 0.78 1.7E-05 47.7 8.1 68 338-413 106-179 (389)
149 PRK07855 lipid-transfer protei 91.0 1.6 3.5E-05 45.3 10.3 95 318-423 6-106 (386)
150 PLN03173 chalcone synthase; Pr 90.9 0.92 2E-05 47.2 8.4 70 338-413 107-180 (391)
151 PF13723 Ketoacyl-synt_2: Beta 90.5 2.4 5.1E-05 40.5 10.1 92 74-172 33-147 (218)
152 PLN03170 chalcone synthase; Pr 90.5 0.82 1.8E-05 47.8 7.6 71 338-414 111-185 (401)
153 COG3424 BcsA Predicted naringe 90.4 0.94 2E-05 45.0 7.3 68 338-409 81-154 (356)
154 PRK06065 acetyl-CoA acetyltran 90.4 1.3 2.9E-05 46.0 9.0 96 318-423 11-116 (392)
155 PLN03171 chalcone synthase-lik 90.2 1.2 2.7E-05 46.4 8.7 70 338-413 113-186 (399)
156 PLN00415 3-ketoacyl-CoA syntha 90.2 0.85 1.8E-05 48.3 7.3 68 338-413 139-212 (466)
157 PRK06365 acetyl-CoA acetyltran 89.8 2.3 5E-05 44.8 10.4 77 338-423 42-124 (430)
158 PRK12404 stage V sporulation p 89.2 1.5 3.2E-05 44.2 7.7 40 338-379 59-102 (334)
159 PLN03172 chalcone synthase fam 89.2 1.6 3.4E-05 45.6 8.4 67 338-412 107-179 (393)
160 PRK06816 3-oxoacyl-(acyl carri 88.8 1.5 3.2E-05 45.4 7.8 82 79-168 274-366 (378)
161 PRK08142 acetyl-CoA acetyltran 88.4 3 6.5E-05 43.4 9.9 97 318-423 7-107 (388)
162 PRK07204 3-oxoacyl-(acyl carri 88.3 2 4.4E-05 43.2 8.4 70 338-413 57-131 (329)
163 PRK12880 3-oxoacyl-(acyl carri 88.0 1.7 3.8E-05 44.5 7.8 68 338-414 65-139 (353)
164 PRK05963 3-oxoacyl-(acyl carri 87.7 2.4 5.1E-05 42.7 8.5 66 338-411 57-127 (326)
165 PRK12578 acetyl-CoA acetyltran 87.5 2.7 5.8E-05 43.6 8.9 76 338-423 26-107 (385)
166 PF02801 Ketoacyl-synt_C: Beta 87.4 1.6 3.5E-05 37.2 6.0 101 53-156 3-111 (119)
167 PRK06840 hypothetical protein; 87.3 2.5 5.4E-05 42.8 8.4 42 338-379 58-105 (339)
168 COG0332 FabH 3-oxoacyl-[acyl-c 87.0 2.3 5E-05 43.0 7.8 70 338-415 57-131 (323)
169 PF02797 Chal_sti_synt_C: Chal 86.5 3.3 7.1E-05 37.2 7.7 101 337-438 42-149 (151)
170 TIGR00748 HMG_CoA_syn_Arc hydr 86.4 1.7 3.6E-05 44.4 6.5 85 75-167 206-296 (345)
171 cd00751 thiolase Thiolase are 85.8 2.7 5.8E-05 43.6 7.8 75 338-422 27-108 (386)
172 PRK08304 stage V sporulation p 85.7 2.5 5.4E-05 42.8 7.1 40 338-377 61-102 (337)
173 PRK04262 hypothetical protein; 85.6 2.3 5E-05 43.4 7.1 42 338-379 56-102 (347)
174 PRK09258 3-oxoacyl-(acyl carri 85.4 3.8 8.3E-05 41.3 8.6 42 338-379 66-112 (338)
175 PRK06059 lipid-transfer protei 85.1 3.6 7.7E-05 42.9 8.3 77 338-423 28-110 (399)
176 TIGR02845 spore_V_AD stage V s 85.0 2.9 6.2E-05 42.2 7.2 41 338-378 55-97 (327)
177 PRK08257 acetyl-CoA acetyltran 85.0 7.2 0.00016 42.0 10.8 95 319-422 7-113 (498)
178 KOG1393 Hydroxymethylglutaryl- 84.9 3.7 8.1E-05 42.0 7.8 100 51-156 40-142 (462)
179 cd00825 decarbox_cond_enzymes 84.2 9.9 0.00021 37.9 11.0 79 76-155 204-286 (332)
180 cd00827 init_cond_enzymes "ini 83.1 8.2 0.00018 38.4 9.8 41 338-378 53-98 (324)
181 TIGR00747 fabH 3-oxoacyl-(acyl 83.0 5.2 0.00011 39.9 8.3 42 338-379 56-102 (318)
182 PRK06366 acetyl-CoA acetyltran 82.8 4.4 9.5E-05 42.1 7.8 75 338-422 31-112 (388)
183 PRK06157 acetyl-CoA acetyltran 82.8 3.7 8E-05 42.8 7.3 77 338-423 32-113 (398)
184 PRK08170 acetyl-CoA acetyltran 82.5 4 8.7E-05 43.0 7.5 75 338-422 32-113 (426)
185 cd00829 SCP-x_thiolase Thiolas 82.2 4.7 0.0001 41.4 7.8 77 338-423 21-102 (375)
186 TIGR01930 AcCoA-C-Actrans acet 81.8 4.5 9.7E-05 42.0 7.4 75 338-422 26-107 (386)
187 PRK07515 3-oxoacyl-(acyl carri 81.4 5.6 0.00012 40.9 8.0 41 338-378 100-145 (372)
188 PRK12879 3-oxoacyl-(acyl carri 81.2 5.9 0.00013 39.6 8.0 42 338-379 58-104 (325)
189 PRK06066 acetyl-CoA acetyltran 81.2 10 0.00022 39.4 9.8 94 318-423 6-110 (385)
190 COG1214 Inactive homolog of me 80.8 6.3 0.00014 37.6 7.5 80 74-162 36-115 (220)
191 cd00831 CHS_like Chalcone and 80.6 8 0.00017 39.5 8.8 42 338-379 90-135 (361)
192 PRK09185 3-oxoacyl-(acyl carri 80.3 12 0.00025 38.9 10.0 100 50-156 236-341 (392)
193 PRK06205 acetyl-CoA acetyltran 79.7 5.4 0.00012 41.7 7.2 75 338-422 31-112 (404)
194 cd00830 KAS_III Ketoacyl-acyl 79.6 7.7 0.00017 38.6 8.1 42 338-379 55-101 (320)
195 PRK06519 3-oxoacyl-(acyl carri 78.9 5.8 0.00013 41.4 7.2 77 77-156 280-358 (398)
196 PRK09352 3-oxoacyl-(acyl carri 78.8 8.8 0.00019 38.3 8.3 67 338-412 57-129 (319)
197 PRK06064 acetyl-CoA acetyltran 78.8 6.6 0.00014 40.7 7.6 77 338-423 27-110 (389)
198 TIGR01835 HMG-CoA-S_prok 3-hyd 78.8 12 0.00025 38.8 9.3 40 338-379 54-98 (379)
199 PRK08235 acetyl-CoA acetyltran 78.2 6.8 0.00015 40.8 7.4 75 338-422 31-112 (393)
200 PRK07851 acetyl-CoA acetyltran 77.9 7.6 0.00017 40.6 7.7 76 338-423 32-115 (406)
201 cd00832 CLF Chain-length facto 76.7 14 0.00029 38.6 9.2 95 53-156 252-352 (399)
202 PRK08256 lipid-transfer protei 76.5 6.3 0.00014 40.9 6.6 73 338-422 27-104 (391)
203 PRK09051 beta-ketothiolase; Pr 76.4 9.1 0.0002 39.9 7.8 75 338-422 32-114 (394)
204 PRK06633 acetyl-CoA acetyltran 76.2 8.8 0.00019 40.0 7.6 75 338-422 32-113 (392)
205 PRK05656 acetyl-CoA acetyltran 75.8 8.6 0.00019 40.0 7.4 75 338-422 31-112 (393)
206 TIGR03150 fabF beta-ketoacyl-a 75.6 13 0.00028 38.4 8.7 100 52-156 253-359 (407)
207 PRK05790 putative acyltransfer 75.2 10 0.00022 39.4 7.7 75 338-422 31-112 (393)
208 CHL00203 fabH 3-oxoacyl-acyl-c 75.1 8.1 0.00018 38.9 6.8 78 79-165 228-312 (326)
209 PRK14691 3-oxoacyl-(acyl carri 74.7 24 0.00053 36.0 10.2 100 52-156 184-289 (342)
210 cd00826 nondecarbox_cond_enzym 73.8 11 0.00024 39.2 7.6 76 338-423 28-110 (393)
211 cd00834 KAS_I_II Beta-ketoacyl 73.7 19 0.00042 37.1 9.4 78 77-156 275-359 (406)
212 PLN02644 acetyl-CoA C-acetyltr 73.5 12 0.00026 38.9 7.8 75 338-422 30-111 (394)
213 PRK07314 3-oxoacyl-(acyl carri 72.9 15 0.00032 38.2 8.4 100 52-156 254-360 (411)
214 PRK05952 3-oxoacyl-(acyl carri 71.6 19 0.00042 37.3 8.7 98 52-156 232-335 (381)
215 PLN02287 3-ketoacyl-CoA thiola 71.2 12 0.00027 39.7 7.3 95 318-422 48-158 (452)
216 PRK08963 fadI 3-ketoacyl-CoA t 70.8 16 0.00034 38.6 8.0 75 338-422 34-115 (428)
217 TIGR03725 bact_YeaZ universal 70.1 5 0.00011 37.7 3.7 64 73-146 31-98 (202)
218 PRK07108 acetyl-CoA acetyltran 69.9 13 0.00028 38.7 7.0 75 338-422 32-114 (392)
219 PRK07937 lipid-transfer protei 69.4 42 0.00091 34.4 10.5 104 50-165 225-335 (352)
220 PRK06954 acetyl-CoA acetyltran 69.0 16 0.00035 38.0 7.5 75 338-422 36-117 (397)
221 PRK08722 3-oxoacyl-(acyl carri 67.8 37 0.0008 35.6 10.0 77 78-156 279-363 (414)
222 PTZ00050 3-oxoacyl-acyl carrie 67.7 33 0.00072 35.9 9.7 99 53-156 262-369 (421)
223 PRK06333 3-oxoacyl-(acyl carri 67.7 31 0.00068 36.0 9.5 78 77-156 288-371 (424)
224 PLN02326 3-oxoacyl-[acyl-carri 67.2 19 0.00042 37.1 7.7 78 79-165 282-366 (379)
225 PRK06147 3-oxoacyl-(acyl carri 66.8 13 0.00028 38.0 6.2 88 77-165 234-329 (348)
226 PRK07661 acetyl-CoA acetyltran 66.6 24 0.00052 36.7 8.2 75 338-422 32-114 (391)
227 PRK09050 beta-ketoadipyl CoA t 66.6 38 0.00083 35.4 9.7 97 52-162 280-384 (401)
228 cd00833 PKS polyketide synthas 66.5 34 0.00073 35.4 9.4 102 52-158 257-368 (421)
229 TIGR02430 pcaF beta-ketoadipyl 64.5 35 0.00077 35.6 9.0 98 51-162 278-383 (400)
230 PLN02787 3-oxoacyl-[acyl-carri 64.1 43 0.00092 36.5 9.8 99 53-156 384-488 (540)
231 PRK07516 acetyl-CoA acetyltran 64.1 27 0.00058 36.2 8.0 76 338-423 27-110 (389)
232 smart00825 PKS_KS Beta-ketoacy 63.9 40 0.00088 35.0 9.4 80 76-157 278-367 (424)
233 PRK09052 acetyl-CoA acetyltran 63.5 24 0.00051 36.9 7.5 75 338-422 36-119 (399)
234 cd00828 elong_cond_enzymes "el 63.3 34 0.00074 35.4 8.7 79 76-156 273-358 (407)
235 PTZ00455 3-ketoacyl-CoA thiola 62.7 20 0.00044 37.9 6.9 76 338-422 53-144 (438)
236 PRK07103 polyketide beta-ketoa 62.7 43 0.00094 34.9 9.3 96 52-156 261-362 (410)
237 TIGR01833 HMG-CoA-S_euk 3-hydr 62.0 44 0.00094 35.6 9.2 39 338-376 55-98 (454)
238 PRK08131 acetyl-CoA acetyltran 61.8 24 0.00053 36.8 7.2 75 338-422 31-113 (401)
239 PLN02836 3-oxoacyl-[acyl-carri 61.4 48 0.001 35.0 9.4 99 52-156 277-385 (437)
240 COG0304 FabB 3-oxoacyl-(acyl-c 60.0 36 0.00079 35.7 8.1 96 52-155 254-359 (412)
241 PRK07910 3-oxoacyl-(acyl carri 59.8 46 0.001 34.9 9.0 99 52-156 264-368 (418)
242 PF00814 Peptidase_M22: Glycop 59.3 7.4 0.00016 38.3 2.7 59 74-136 28-89 (268)
243 PRK13359 beta-ketoadipyl CoA t 58.6 57 0.0012 34.1 9.3 97 52-162 279-383 (400)
244 PRK06445 acetyl-CoA acetyltran 58.3 31 0.00067 35.9 7.3 77 338-422 37-119 (394)
245 PRK08242 acetyl-CoA acetyltran 56.0 34 0.00074 35.8 7.1 75 338-422 33-115 (402)
246 PRK06289 acetyl-CoA acetyltran 55.6 31 0.00068 35.9 6.8 24 338-361 31-54 (403)
247 TIGR02446 FadI fatty oxidation 55.4 45 0.00098 35.2 8.0 75 338-422 36-117 (430)
248 PRK07850 acetyl-CoA acetyltran 53.1 44 0.00095 34.7 7.4 75 338-422 31-113 (387)
249 PRK09116 3-oxoacyl-(acyl carri 53.0 74 0.0016 33.2 9.1 95 53-156 256-356 (405)
250 TIGR00329 gcp_kae1 metallohydr 53.0 16 0.00035 36.6 4.0 58 75-136 48-108 (305)
251 PRK06690 acetyl-CoA acetyltran 52.0 47 0.001 34.2 7.2 78 78-162 259-343 (361)
252 PRK07801 acetyl-CoA acetyltran 51.1 47 0.001 34.3 7.2 75 338-422 31-113 (382)
253 PLN02577 hydroxymethylglutaryl 50.5 99 0.0022 33.0 9.6 41 338-378 58-106 (459)
254 TIGR03723 bact_gcp putative gl 50.0 19 0.00041 36.3 3.9 58 74-136 48-109 (314)
255 PRK08947 fadA 3-ketoacyl-CoA t 47.9 63 0.0014 33.5 7.5 75 338-422 32-115 (387)
256 PRK14878 UGMP family protein; 47.8 30 0.00065 35.0 5.0 79 54-136 20-104 (323)
257 PRK06501 3-oxoacyl-(acyl carri 47.3 38 0.00083 35.6 5.9 77 78-156 290-373 (425)
258 TIGR03722 arch_KAE1 universal 46.8 27 0.00058 35.3 4.5 57 76-136 46-105 (322)
259 COG0533 QRI7 Metal-dependent p 46.7 28 0.00062 35.4 4.5 70 63-136 35-110 (342)
260 PRK09604 UGMP family protein; 45.0 27 0.00058 35.5 4.1 59 74-136 50-111 (332)
261 PRK06025 acetyl-CoA acetyltran 45.0 60 0.0013 34.2 6.8 72 80-160 318-398 (417)
262 PRK09268 acetyl-CoA acetyltran 44.6 63 0.0014 34.1 7.0 75 338-422 36-117 (427)
263 TIGR03285 methan_mark_14 putat 43.9 50 0.0011 33.9 5.6 68 70-137 60-136 (445)
264 PTZ00340 O-sialoglycoprotein e 42.1 30 0.00065 35.4 4.0 59 74-136 48-109 (345)
265 KOG2708 Predicted metalloprote 42.1 38 0.00083 32.6 4.3 29 76-104 50-78 (336)
266 PF07451 SpoVAD: Stage V sporu 39.4 38 0.00083 34.0 4.0 86 80-168 206-307 (329)
267 PF02803 Thiolase_C: Thiolase, 37.5 1.3E+02 0.0028 25.9 6.7 77 79-163 24-108 (123)
268 PRK06504 acetyl-CoA acetyltran 36.9 1E+02 0.0023 32.0 7.1 75 338-422 31-113 (390)
269 PF04422 FrhB_FdhB_N: Coenzyme 35.6 55 0.0012 26.0 3.8 31 135-165 14-44 (82)
270 PF01154 HMG_CoA_synt_N: Hydro 35.3 70 0.0015 29.5 4.8 82 338-423 58-144 (174)
271 PF09663 Amido_AtzD_TrzD: Amid 34.6 1E+02 0.0022 31.4 6.2 28 338-365 135-163 (365)
272 PF00108 Thiolase_N: Thiolase, 34.2 97 0.0021 30.3 6.1 75 338-422 31-112 (264)
273 PF09887 DUF2114: Uncharacteri 32.8 1E+02 0.0022 31.8 5.9 68 70-137 62-139 (448)
274 PF01890 CbiG_C: Cobalamin syn 29.7 1E+02 0.0022 26.4 4.8 59 52-125 1-59 (121)
275 PRK09605 bifunctional UGMP fam 29.1 52 0.0011 35.6 3.5 50 76-125 49-101 (535)
276 COG3360 Uncharacterized conser 28.6 45 0.00097 25.6 2.0 27 337-363 19-45 (71)
277 PRK08439 3-oxoacyl-(acyl carri 28.1 4.4E+02 0.0096 27.3 10.2 76 77-156 274-356 (406)
278 TIGR02445 fadA fatty oxidation 27.6 2E+02 0.0044 29.7 7.5 75 338-422 30-113 (385)
279 TIGR02813 omega_3_PfaA polyket 25.9 3E+02 0.0065 36.1 9.6 104 49-157 288-403 (2582)
280 KOG1394 3-oxoacyl-(acyl-carrie 24.2 55 0.0012 33.6 2.4 46 78-125 302-348 (440)
281 PRK07027 cobalamin biosynthesi 22.7 1.3E+02 0.0029 25.9 4.2 60 52-126 3-62 (126)
282 COG0533 QRI7 Metal-dependent p 22.2 69 0.0015 32.7 2.6 25 338-362 55-79 (342)
283 PF03880 DbpA: DbpA RNA bindin 21.9 52 0.0011 25.4 1.4 34 334-367 12-45 (74)
284 PRK13410 molecular chaperone D 21.2 2.3E+02 0.0049 31.9 6.7 53 79-137 311-363 (668)
285 PTZ00186 heat shock 70 kDa pre 21.2 2.4E+02 0.0051 31.6 6.8 53 80-138 337-389 (657)
286 KOG2708 Predicted metalloprote 20.6 74 0.0016 30.7 2.3 23 339-361 55-77 (336)
287 cd07021 Clp_protease_NfeD_like 20.6 4.8E+02 0.01 23.9 7.7 63 83-151 18-82 (178)
288 COG5441 Uncharacterized conser 20.4 3.2E+02 0.0069 27.6 6.6 41 49-104 2-42 (401)
289 COG3473 Maleate cis-trans isom 20.0 2.2E+02 0.0047 27.2 5.2 64 70-133 41-104 (238)
290 TIGR01796 CM_mono_aroH monofun 20.0 2.3E+02 0.0049 24.3 4.9 49 83-134 26-74 (117)
No 1
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-103 Score=746.02 Aligned_cols=434 Identities=81% Similarity=1.257 Sum_probs=415.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCcchhhhhhcccccCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHH
Q 012506 4 AINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL 83 (462)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~ 83 (462)
||+|+|.|..||.++.. ...++.++|-.+++.+|+ +|||||++.|||++|+++|.|+|+.++||+..++
T Consensus 1 ~~er~~~ll~hl~~~s~-----s~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl 69 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSS-----SASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVL 69 (435)
T ss_pred CchHHHHHHHhcCCccc-----ccccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHH
Confidence 58899999999987543 456777888878877665 8999999999999999999999999999999999
Q ss_pred HHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEE
Q 012506 84 KAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (462)
Q Consensus 84 ~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~ 163 (462)
+..+++.+++|++|++|++|+++.++. +...+|+.+++.|+|.++|+.+||++|+||++|+...+..|++|.||++|++
T Consensus 70 ~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~ 148 (435)
T KOG1389|consen 70 RAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAA 148 (435)
T ss_pred HHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeeccc
Confidence 999999999999999999999999998 6888999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCC-CCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccce
Q 012506 164 GLESMTVN-PMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242 (462)
Q Consensus 164 G~E~ms~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~ 242 (462)
|+|+|+.. |..|...+.+......++.+|+.|||+++|+++++||+||++||++|+.||++|++|.+.|+|++||+|++
T Consensus 149 GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~ 228 (435)
T KOG1389|consen 149 GVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVK 228 (435)
T ss_pred chhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeee
Confidence 99999976 56677778888888899999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEE
Q 012506 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 322 (462)
Q Consensus 243 ~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g 322 (462)
+++.||+ +.+++++++.|||+|+.+|+++|.+++|+|.+||++|.+|+||++|||+||+||+++.|.++|+|+++.+..
T Consensus 229 tkv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~ 307 (435)
T KOG1389|consen 229 TKVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRD 307 (435)
T ss_pred eeccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeee
Confidence 9999999 788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHH
Q 012506 323 FAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 402 (462)
Q Consensus 323 ~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~ 402 (462)
+...+++|++||+||+.||+++|+.+||+.+|||+|||||+|++|.+||.++|||++++||++||++++|||+||||+|+
T Consensus 308 f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~ 387 (435)
T KOG1389|consen 308 FAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARC 387 (435)
T ss_pred eeeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecccccccccccc
Q 012506 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRK 450 (462)
Q Consensus 403 ~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~~~~~~~~~~ 450 (462)
+++++++||+++.++++|+++||+|+|||+|.+|+++...+++++.|+
T Consensus 388 VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer~~~~d~~~~~~~ 435 (435)
T KOG1389|consen 388 VATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGGGVDELDNARK 435 (435)
T ss_pred HHHHHHHHHhhccccccceEEEeecCCcchheeeecCCCCchhhhccC
Confidence 999999999999888999999999999999999999999999988774
No 2
>PLN02287 3-ketoacyl-CoA thiolase
Probab=100.00 E-value=2.6e-85 Score=683.25 Aligned_cols=452 Identities=87% Similarity=1.329 Sum_probs=402.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCCCCcchhhhhhcccccCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHH
Q 012506 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLA 80 (462)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~ 80 (462)
|+++.+|.+.|+.||+++.+. +..|..+.|.++++++|+|+..+.++|+|||++||||+|.++|.+++.++.||+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~ 76 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSSE----PSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLA 76 (452)
T ss_pred CchHHHHHHHHHhhccCCCCC----ccccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHH
Confidence 788999999999999875431 5578899999999999999999999999999999999985468888999999999
Q ss_pred HHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEE
Q 012506 81 PVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (462)
Q Consensus 81 ~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~v 160 (462)
+|+++||+++|+++++||.+++|++.+...+.++.++.++..+|++...|+++|+++|+||++|+..|+++|++|.+|+|
T Consensus 77 eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvv 156 (452)
T PLN02287 77 PVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 156 (452)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeE
Confidence 99999999999999999999999987665534567788999999976689999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012506 161 IGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240 (462)
Q Consensus 161 Lv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p 240 (462)
||+|+|+||..|..+...+.+.+.......+...+||+++++|+++||++||+||+|+++||+||.+|+++|+|++||+|
T Consensus 157 Lv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~p 236 (452)
T PLN02287 157 IGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236 (452)
T ss_pred EEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceee
Confidence 99999999987643322222211111000122357999999999999999999999999999999999999999999999
Q ss_pred ceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEE
Q 012506 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 320 (462)
Q Consensus 241 ~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i 320 (462)
|.+..++++.+..++++++.||.+|+.++.|+|.+++|+|+|+|++|.+|||+++|||+++||++++.|++++.+|++++
T Consensus 237 v~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~ 316 (452)
T PLN02287 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316 (452)
T ss_pred eeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEE
Confidence 98753223323333457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHH
Q 012506 321 RTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 400 (462)
Q Consensus 321 ~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~ 400 (462)
.++...+.+|..++.++..+++++|+++||+++|||++|+||+|++++++++|.|||+++|||++||++++|||+||||+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~ 396 (452)
T PLN02287 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGA 396 (452)
T ss_pred EEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHH
Confidence 99988778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecccccccccccccccccc
Q 012506 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNF 456 (462)
Q Consensus 401 ~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~~~~~~~~~~~~~~~~ 456 (462)
++++++++||++++++.++||+++|+|||+|.|+|||+.+..++..+.|||++||+
T Consensus 397 ~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~ie~~~~~~~~~~~~~~~~~~~ 452 (452)
T PLN02287 397 RCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNNL 452 (452)
T ss_pred HHHHHHHHHHHhcCCCCCeeEEEEccccCceeEEEEEecCchhhhhhcccccCCCC
Confidence 99999999999875434799999999999999999999999999999999999995
No 3
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=7.2e-79 Score=626.74 Aligned_cols=376 Identities=41% Similarity=0.653 Sum_probs=342.0
Q ss_pred CcEEEEEeeecccccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKS-KRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~-~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++||||++.||||+|. +.|.|++.++.||+.+|++++|+++|+++++||.+++|++++...++.+.++.++..+|+|.+
T Consensus 2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~ 81 (402)
T PRK08242 2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET 81 (402)
T ss_pred CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence 5799999999999984 579999999999999999999999999999999999999988665457889999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhh-hcccccHHHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQA-QNCLLPMGVTSENVAHR 206 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~a~~~~~~ 206 (462)
+|+++||++|+||++||..|+++|++|.+|++|++|+|+||+.|+.... .+ +.+.... .....+||.++++|+++
T Consensus 82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~---~~~~~~~~~~~~~~mg~~Ae~~a~~ 158 (402)
T PRK08242 82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAW---AMDPSTNFPTYFVPQGISADLIATK 158 (402)
T ss_pred CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCccc---ccCcccccccccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998852211 11 0011011 11235799999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC----
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK---- 282 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p---- 282 (462)
||||||+||+|+++||+||.+|+++|+|++||+||+. ++ + .+++++|+++|+++|+|+|.++||+|+|
T Consensus 159 ~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~~-~---~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~ 230 (402)
T PRK08242 159 YGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----QN-G---LTILDHDEHMRPGTTMESLAKLKPSFAMMGEM 230 (402)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----CC-C---CEeeCCCCCCCCCCCHHHHhCCCCCccCcccc
Confidence 9999999999999999999999999999999999972 21 1 2468999999999999999999999988
Q ss_pred CC-----------------CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHH
Q 012506 283 DG-----------------TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAV 345 (462)
Q Consensus 283 ~g-----------------~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL 345 (462)
+| ++|.+|+|+++|||+|+||+++++|++++++|+++|+|++..+.+|..++.++..+++++|
T Consensus 231 ~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al 310 (402)
T PRK08242 231 GGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKAL 310 (402)
T ss_pred CcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHH
Confidence 44 5899999999999999999999999999999999999999999999888899999999999
Q ss_pred HHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q 012506 346 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 425 (462)
Q Consensus 346 ~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~ 425 (462)
+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|
T Consensus 311 ~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~--~~g~~~~c 388 (402)
T PRK08242 311 AKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLC 388 (402)
T ss_pred HHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877 99999999
Q ss_pred cccceeEEEEEEe
Q 012506 426 IGTGMGAAAVFER 438 (462)
Q Consensus 426 ~G~G~g~A~v~~~ 438 (462)
+|||+|.|+|||+
T Consensus 389 ~ggG~g~a~~~e~ 401 (402)
T PRK08242 389 VGGGMGIATIIER 401 (402)
T ss_pred ccCCceeEEEEEe
Confidence 9999999999997
No 4
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.2e-77 Score=615.27 Aligned_cols=379 Identities=36% Similarity=0.533 Sum_probs=344.9
Q ss_pred CcEEEEEeeecccc--cCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALC--KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~--~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
++||||++.||||+ |.++|.|++.++.+|+..+++++|+++++++++||.|++|++++.+.+++|++|++++.+|||.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 47999999999998 7447999999999999999999999999999999999999998877657899999999999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---C-CCChhhhhhh-hh-hc--ccccHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---G-SVNPKVKAFE-QA-QN--CLLPMGVT 199 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~-~~~~~~~~~~-~~-~~--~~~~~g~~ 199 (462)
++|+++||+.|+||++||..++++|++|++|++|++|+|+||+.|+.+. . ...+.+.+.. .. .+ ...+||.+
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ 161 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVC 161 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999986221 0 1111111110 00 11 23589999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+|+++++||||||+||+||+.||++|.+|+++|+|++||+||+. ++ ..+++++||++|+++|+|.|.++||+
T Consensus 162 ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~----~~----~~~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 162 GDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR----DD----GSVALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc----CC----CCEEecCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999972 11 12468999999999999999999999
Q ss_pred cc--------CCCC------------------cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC
Q 012506 280 FK--------KDGT------------------TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 333 (462)
Q Consensus 280 f~--------p~g~------------------~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~ 333 (462)
|+ ++|+ +|.+|+|+++|||+|+||+++++|++++++|+++|++++..+.+|..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 97 5787 899999999999999999999999999999999999999999999988
Q ss_pred CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 334 ~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
+.++..+++++|+++|++++|||+||+||+|+.+.+.+++.||++++|+|++||++++|||+|+||+++++++++||+++
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCcEEEEEeecccceeEEEEEEe
Q 012506 414 GRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 414 ~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++ ++||+++|+|||+|.|+|||+
T Consensus 394 g~--~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 GL--KRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred CC--CeEEEEEEeeccceeEEEEEe
Confidence 76 899999999999999999997
No 5
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.3e-77 Score=614.95 Aligned_cols=379 Identities=37% Similarity=0.546 Sum_probs=342.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|+|++||||+| +.|.+++.++.||+.++++++|+++|+++++||.+++|++.+...++.+++|.+++.+|+|.++
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 2 GNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 579999999999998 5788999999999999999999999999999999999998865554578899999999998789
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC--CCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.... .........++ .....|+.++++|+++|
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~--~~~~~m~~~ae~~~~~y 158 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWD--IDMPNQFEAAERIAKRR 158 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccc--cCcchHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999988742111 11000000011 11235778999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecc---c-CCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI---V-DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~---~-np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
|+|||+||+|+++||+||.+|+++|+|++||+||+++. + ||+++.+ +++.||.+| ++|+|+|.+++|+| ++
T Consensus 159 gisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~---~~~~D~~~r-~~t~e~l~~l~p~~-~~ 233 (387)
T PRK07850 159 GITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETR---LVTRDQGLR-DTTMEGLAGLKPVL-EG 233 (387)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCce---EeecCCCcc-cCCHHHhccCCCCC-CC
Confidence 99999999999999999999999999999999998763 3 8888653 589999999 99999999999999 67
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
|.+|.+|||+++|||+|+||++++.|++++.+|.++|.+++..+.+|..+..++..+++++|+++||+++|||++|+||+
T Consensus 234 ~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 313 (387)
T PRK07850 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEA 313 (387)
T ss_pred CCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeeccc
Confidence 77899999999999999999999999999999989999999888888888888999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 364 fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+++++.++|.||++.+|||++||++++|||+|+||+++++|+++||+++++ ++||+++|+|||+|.|++||+
T Consensus 314 F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 314 FASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDK--STALITMCAGGALSTGTIIER 386 (387)
T ss_pred chHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCC--CeEEEEEccccCceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999877 999999999999999999997
No 6
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=100.00 E-value=1.2e-76 Score=610.80 Aligned_cols=380 Identities=40% Similarity=0.601 Sum_probs=342.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.+|||+|++||||+| ++|.+++.++.+|+.++++++|++ +++++++||.+++|++.+.+.++.+++|.+++.+|+|.+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 479999999999998 679999999999999999999996 699999999999999987665468999999999999988
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C-CC--Chhhhh-h-------h--hhhccc
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G-SV--NPKVKA-F-------E--QAQNCL 193 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~-~~--~~~~~~-~-------~--~~~~~~ 193 (462)
+|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.+. . .+ ...+.+ . + ......
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGV 160 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999999885211 1 11 111111 0 0 011123
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+||.++|+++++||||||+||+|+++||+++..++..|+|++||+||+++. + . ...++++.||.+|+ +|+|+|
T Consensus 161 ~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~--~-~--~~~~~~~~De~~r~-~t~e~l 234 (400)
T PRK13359 161 DSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQ--K-K--GDPLVVSRDEHPRE-TTLEAL 234 (400)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeecc--C-C--CCceeecCCCCCCC-CCHHHH
Confidence 5799999999999999999999999999999999999999999999998742 1 1 12257899999998 999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.+++|+|+|+|++|.+|+|+++|||+++||+++++|++++.+|+++|++++..+.+|+.++.++..+++++|+++||+++
T Consensus 235 ~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 314 (400)
T PRK13359 235 AKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLD 314 (400)
T ss_pred hcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999999999999999998888988888999999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||++|+||+|+++++.++|.||+++ .|+|++||.+++|||+||||+++++++++||+++++ ++||+++|+|||+|
T Consensus 315 DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~--~~g~~~~c~~gG~g 392 (400)
T PRK13359 315 QFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQG 392 (400)
T ss_pred HcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCC--CeEEEEEcccCCce
Confidence 99999999999999999999999964 699999999999999999999999999999999887 99999999999999
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
.|+|||+
T Consensus 393 ~a~~ie~ 399 (400)
T PRK13359 393 IAIAIER 399 (400)
T ss_pred eEEEEEe
Confidence 9999997
No 7
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.7e-76 Score=607.17 Aligned_cols=391 Identities=48% Similarity=0.720 Sum_probs=346.3
Q ss_pred CCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 46 SVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 46 ~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
.+.|++|+|||++||||+|.+.|.|++.++.||+.+|++++|+++ |+++++||.+++|++.++..++.+.++.+...+|
T Consensus 2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G 81 (399)
T PRK09052 2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG 81 (399)
T ss_pred CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence 455688999999999999744688999999999999999999997 9999999999999988776545778888888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
+|..+|+++|+++|+||++|+..|+++|++|++|+||++|+|+||+.|+... ......+.+..........|++++++|
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 161 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKV 161 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHH
Confidence 9756899999999999999999999999999999999999999998774111 011111111110111124799999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCC----CCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK----TGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~----a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++||+|||+||+|+++||+||.+|+++|+|++||+|+++....|. ..+..+.++..|+++|+++|+|.|.+++|+
T Consensus 162 ~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~ 241 (399)
T PRK09052 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPV 241 (399)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCc
Confidence 9999999999999999999999999999999999999976432121 111133568999999999999999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||++|
T Consensus 242 f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~e 321 (399)
T PRK09052 242 FANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIE 321 (399)
T ss_pred cCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 99889999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 360 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 360 ihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+||+|+++++.++|.||++++|+|++||++++|||+|+||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 322 i~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~--~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 322 LNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred eCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999877 899999999999999999997
No 8
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.8e-76 Score=606.92 Aligned_cols=385 Identities=45% Similarity=0.722 Sum_probs=349.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||+|++||||+|.+.+.+++.++.+|+.+|++++|+++|+++++||.+++|++.++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 57999999999999866788899999999999999999999999999999999999887654457999999999998679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
|+++|+++|+||++||+.|+++|++|++|++|++|+|+||+.|..+.. .....+.. ....+++..|+.++++++.+|+
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~-~~~~~~~~~m~~~ae~~a~~~~ 160 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLV-EHKPEIYWSMLQTAENVAKRYG 160 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhh-ccCCccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999987653221 11111110 0011223468999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceec--ccCCCCC--CCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATK--IVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~--~~np~a~--~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
|+|++||+|+..||++|..++++|+|++||+||+.. .+||+++ +++++++++||.+|+++|+|+|.+++|+| +.|
T Consensus 161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g 239 (392)
T PRK07108 161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG 239 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence 999999999999999999999999999999999754 4689886 67778899999999999999999999999 678
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+.+|+.++.++..|++++|+++||+++|||++|+||+|
T Consensus 240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eaf 319 (392)
T PRK07108 240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAF 319 (392)
T ss_pred CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHH
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++++++|.||++++|||++||++++|||+|+||++.+++++++|+++++ ++||+++|+|||+|.|+|||+
T Consensus 320 a~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 320 AVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGA--KYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhCC--CEEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999998877 899999999999999999997
No 9
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-76 Score=609.36 Aligned_cols=371 Identities=35% Similarity=0.551 Sum_probs=334.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.+++.++.+|+.++++++|+|+||++++||.+++|++.+.+. ++++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~~ 79 (388)
T PRK06366 2 KDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFGV 79 (388)
T ss_pred CcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCCC
Confidence 579999999999998 568888999999999999999999999999999999999876553 567788999999998678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C--C--C----Chhhhhhh--hh-hcc--cc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G--S--V----NPKVKAFE--QA-QNC--LL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~--~--~----~~~~~~~~--~~-~~~--~~ 194 (462)
|.++++++|+||+.++..|+++|++|++|+||++|+|+||+.|+... . . . ...+.+.. .. .++ ..
T Consensus 80 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (388)
T PRK06366 80 TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFE 159 (388)
T ss_pred cceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCc
Confidence 99999999999999999999999999999999999999997654211 0 0 0 00011110 11 111 24
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+|+.. +++|+++| ++|+|+++
T Consensus 160 ~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~~ 224 (388)
T PRK06366 160 HMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLA 224 (388)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHHh
Confidence 5899999999999999999999999999999999999999999999741 56799999 79999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
++||+|+|+|++|.+|||+++|||+|+||+|+|+|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|
T Consensus 225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~D 304 (388)
T PRK06366 225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDY 304 (388)
T ss_pred hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888889999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 434 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~ 434 (462)
||++|+||+|++++++++|.|||+.+|||++||++++|||+||||+++++|+++||+++++ ++||+++|+|||+|.|+
T Consensus 305 iDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~--~~g~~~~c~~gg~g~a~ 382 (388)
T PRK06366 305 YDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHM--KTGLATLCHGGGGAHTL 382 (388)
T ss_pred cceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCC--CeEEEEEecccChhhEE
Confidence 9999999999999999999999998899999999999999999999999999999999877 99999999999999999
Q ss_pred EEEec
Q 012506 435 VFERG 439 (462)
Q Consensus 435 v~~~~ 439 (462)
|||+.
T Consensus 383 ~~e~~ 387 (388)
T PRK06366 383 TLEMV 387 (388)
T ss_pred EEEec
Confidence 99985
No 10
>PRK09051 beta-ketothiolase; Provisional
Probab=100.00 E-value=9.5e-76 Score=604.35 Aligned_cols=382 Identities=44% Similarity=0.704 Sum_probs=341.4
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|||||++||||+| ++|.+++.++.||+.+|+++||+++|+++++||.+++|++.+...+..+.++.++..+|+|.+
T Consensus 2 m~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 2 MREVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 4689999999999998 568889999999999999999999999999999999999987654345788888899999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCCh-hhhhh-hhh-hcc--cccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-KVKAF-EQA-QNC--LLPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~~-~~~~~-~~~-~~~--~~~~g~ 198 (462)
+|+++|+++|+||++|+..|+++|++|.+|++||+|+|+||+.|+.. ...+.. ...+. ... .++ ...|++
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGV 160 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHH
Confidence 89999999999999999999999999999999999999999876411 101100 00110 000 111 236999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++++|+++||++||++|+|+++||+||.+|+++|+|++||+|+.++.+ + ..+++++|+.+|+++|+|+|.+++|
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~--~----~~~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR--K----GEVVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC--C----CCeEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987531 1 1256899999999999999999999
Q ss_pred cccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 279 ~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|+|+ |++|.+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~ 314 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDV 314 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCE
Confidence 99876 89999999999999999999999999999999999999999999989888889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+++++.+.|.||++++|||++||++++|||+||||+++++++++||+++++ +|||+++|+|||+|.|+|||
T Consensus 315 ~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~--~~g~~~~c~~gG~g~a~~~e 392 (394)
T PRK09051 315 IEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFE 392 (394)
T ss_pred EEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999877 99999999999999999999
Q ss_pred ec
Q 012506 438 RG 439 (462)
Q Consensus 438 ~~ 439 (462)
+.
T Consensus 393 ~~ 394 (394)
T PRK09051 393 RL 394 (394)
T ss_pred eC
Confidence 73
No 11
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1e-75 Score=602.52 Aligned_cols=380 Identities=37% Similarity=0.591 Sum_probs=338.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.|++.++.||+.++++++|+++++++++||.+++|++.+...++.+.+|.+++..|||.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v 80 (390)
T PRK06504 2 AEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV 80 (390)
T ss_pred CceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 479999999999998 6799999999999999999999999999999999999999865544568899999999998899
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CCChhhhh-hhhhhc-ccccHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVNPKVKA-FEQAQN-CLLPMGVTSE 201 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~~~~~~-~~~~~~-~~~~~g~~a~ 201 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+.... .+.....+ ..+... ...+|+.+++
T Consensus 81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae 160 (390)
T PRK06504 81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAE 160 (390)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999987742111 11111101 111111 1247889999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||+|||+||+|+++||+||.+|+++|+|++||+|+++..+ . ..+..++.||++|+.+|+|+|.+++|+++
T Consensus 161 ~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~---~--~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 161 MMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRA---D--GSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCC---C--CCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999987532 1 12346888999999999999999999974
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
+|++|.+|||+++|||+|+||++++.|++++.+|+.++.++...+.+|..+..++..+++++|+++||+++|||++|+|
T Consensus 236 -~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~ 314 (390)
T PRK06504 236 -GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVN 314 (390)
T ss_pred -CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 4899999999999999999999999999999999989999988888887888899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+|++++++++|+||||++|||++||++++|||+||||++++.++++||+++.+ ++|++++|+|||+|.++||++
T Consensus 315 d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~~~--~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 315 EAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhhCC--CeEEEEEeecccceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999998866 999999999999999999986
No 12
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=8e-76 Score=604.35 Aligned_cols=384 Identities=48% Similarity=0.752 Sum_probs=342.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+|...|.|++.++.||+.+|+++||+++|+.+++||.+++|++.++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 47999999999999855788999999999999999999999988899999999998876554578889999999997569
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+... ....+.+.+. .......|++++++|+++||
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~m~~~a~~~~~~~g 159 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEA--APEYYMGMGHTAEQVAVKYG 159 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCcccccc--ccchhhhHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999998764110 0001111110 11112358999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceeccc----CCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV----DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~----np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+|||+||+|+++||+||.+|+++|+|++||+|++++.+ +++.... .+++++|+++|+++|+|.|.+++|+|+++|
T Consensus 160 ~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~-~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g 238 (391)
T PRK07661 160 ISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEE-TITFSQDEGVRADTTLEILGKLRPAFNVKG 238 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCccccc-ceeEecCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999999999987531 1222211 267899999999999999999999998889
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
++|.+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|
T Consensus 239 ~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f 318 (391)
T PRK07661 239 SVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAF 318 (391)
T ss_pred CEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHH
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++++.++|.||++++|+|++||++++|||+||||+++++|+++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 319 ~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 319 ASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNE--QFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999999877 899999999999999999997
No 13
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=100.00 E-value=1.8e-75 Score=600.67 Aligned_cols=379 Identities=44% Similarity=0.648 Sum_probs=339.8
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|+|||++||||+|.+.|.+++.++.||+.++++++|++ +|+++++||.+++|++.+...++.++++.+++..|+|.++
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 499999999999986578999999999999999999996 6999999999999999755544567899999999999889
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
|+++||++|+||+.|+..|+++|++|++|++|++|+|+||+.|........+.+.+.. .+....|++++++|+++||+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~ygi 158 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHV--AKAAGMMGLTAEMLGKMHGI 158 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhh--ccccchHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999877532222222222211 11124799999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCccc
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 288 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~t~ 288 (462)
|||+||+|+++||+||.+|+++|+|++||+||+++.++ ..++++++|+.+|+++|+|+++++||+|+| +|++|.
T Consensus 159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD-----GFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC-----CCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 99999999999999999999999999999999875321 123568899999999999999999999998 899999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|++++
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~ 313 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQA 313 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHH
Confidence 99999999999999999999999999999999999998888887777888999999999999999999999999999999
Q ss_pred HHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 369 VYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 369 ~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++|+|||++ .|+|++||++++|||+||||++++.+++++|+++++ ++||+++|+|+|+|.|+|||+
T Consensus 314 l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~--~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 314 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDA--TFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 99999999976 599999999999999999999999999977776655 899999999999999999997
No 14
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=100.00 E-value=1.8e-75 Score=602.67 Aligned_cols=381 Identities=41% Similarity=0.639 Sum_probs=341.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|+|++||||+| +.|.+++.++.+|+.++++++|++ +|+++++||.+++|++.+.+.++.++++.+++.+|+|.+
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 80 (401)
T PRK09050 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS 80 (401)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 579999999999998 568899999999999999999994 799999999999999986554357899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CCC--Chhhhhh--------hh--hhccc
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GSV--NPKVKAF--------EQ--AQNCL 193 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~~--~~~~~~~--------~~--~~~~~ 193 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+... ..+ ...+.+. +. .....
T Consensus 81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T PRK09050 81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGV 160 (401)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999998874110 000 0011110 00 11123
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+||+++++|+++||+|||+||+||..||+|+.+|+++|+|++||+||+++.+ + .+.+++++|+.+|+++|+|+|
T Consensus 161 ~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~--~---~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 161 DSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK--K---GDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC--C---CCceeeCCCCCCCCCCCHHHH
Confidence 57999999999999999999999999999999999999999999999987531 1 223578999999999999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.+++|+|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~ 315 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTID 315 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence 99999999889999999999999999999999999999999999999999998888888888899999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||++|+||+|+++++.++|.||||+ .|+|++||.+++|||+|+||+++++|+++||+++++ ++||+++|+|||+|
T Consensus 316 DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~g 393 (401)
T PRK09050 316 QFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGG--RYALCTMCIGVGQG 393 (401)
T ss_pred HCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccce
Confidence 99999999999999999999999976 599999999999999999999999999999999987 99999999999999
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
.|++||+
T Consensus 394 ~a~~~e~ 400 (401)
T PRK09050 394 IALAIER 400 (401)
T ss_pred eEEEEEe
Confidence 9999997
No 15
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-75 Score=602.27 Aligned_cols=380 Identities=39% Similarity=0.615 Sum_probs=339.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.+|++++|+++|+++++||.+++|++.+.+. +.++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 79 (393)
T PRK08235 2 SKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWEV 79 (393)
T ss_pred CcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCCc
Confidence 579999999999998 678899999999999999999999999999999999999876543 678888899999997679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCC-Chhhhhh--hhh-hc--ccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSV-NPKVKAF--EQA-QN--CLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~-~~~~~~~--~~~-~~--~~~~~g~ 198 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+... ..+ .+.+.+. .+. .+ ....|+.
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (393)
T PRK08235 80 QTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGV 159 (393)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHH
Confidence 99999999999999999999999999999999999999998774211 011 1111110 010 01 1246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++++|+++||+|||++|+|+++||+||.+|+++|+|++||+|+++..+ . ..++++++|+.+|+++|+|++++++|
T Consensus 160 ~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 160 YGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR---K--GDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC---C--CCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999987431 1 12356889999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.++..+..++..+++++|+++||+++|||++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ 314 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF 314 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCee
Confidence 99999999999999999999999999999999999999999999888777777777778899999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+++++.++|.|||+++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 315 EINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGG--GIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred hhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999988 899999999999999999997
No 16
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.3e-75 Score=602.29 Aligned_cols=381 Identities=40% Similarity=0.622 Sum_probs=340.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.|++.++.||+.+|+++||++++|++++||.+++|++.+... +++.++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~~ 79 (404)
T PRK06205 2 RDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVTV 79 (404)
T ss_pred CceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCC
Confidence 579999999999998 678999999999999999999999999999999999999987765 677889999999997678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCC-Ch-hhhh---h--h---hhhcccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSV-NP-KVKA---F--E---QAQNCLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~-~~-~~~~---~--~---~~~~~~~ 194 (462)
|+++|+++|+||++++..|+++|++|.+|++||+|+|+||+.++.. .... .+ .+.. . . .......
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (404)
T PRK06205 80 PGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPG 159 (404)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCC
Confidence 9999999999999999999999999999999999999999766311 1111 00 1111 0 0 0111234
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.|+.++++|+++||+|||+||+|+++||+||.+|++.|+|++||+||.+..+ .++++++++|+.+|+++|+|+++
T Consensus 160 ~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~-----~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 160 GMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR-----KGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC-----CCCceEeccCCCCCCCCCHHHHh
Confidence 6788899999999999999999999999999999999999999999987431 12235688999999999999999
Q ss_pred cCCCcc---cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCC
Q 012506 275 KLKPVF---KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 275 ~~~p~f---~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~ 351 (462)
++||+| +|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.|++..+.+|..++.++..|++++|+++||+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~ 314 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLT 314 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCC
Confidence 999999 58899999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGT 428 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~ 428 (462)
++|||++|+||+|+++++.++|.||||+ +|+|++||++++|||+|+||+++++|+++||+++++ ++||+++|+||
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~c~~g 392 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQA--RYGLETMCIGG 392 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCC--CeEEEEEeccC
Confidence 9999999999999999999999999997 589999999999999999999999999999999877 99999999999
Q ss_pred ceeEEEEEEec
Q 012506 429 GMGAAAVFERG 439 (462)
Q Consensus 429 G~g~A~v~~~~ 439 (462)
|+|.|+|||+-
T Consensus 393 g~g~a~~~e~~ 403 (404)
T PRK06205 393 GQGLAAVFERV 403 (404)
T ss_pred ChhhEEEEEec
Confidence 99999999974
No 17
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=7.2e-77 Score=566.55 Aligned_cols=380 Identities=39% Similarity=0.638 Sum_probs=352.9
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
.+++|+||++.|||++. ++|+|...+..+|..-|++.+|+++.+++++++.+++|++++.+. |++++|++++.+|||.
T Consensus 4 ~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLPY 81 (396)
T ss_pred CCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCCc
Confidence 34789999999999995 899999999999999999999999999999999999999999887 9999999999999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC----CCCh------hh-hhhhhhhcccccH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG----SVNP------KV-KAFEQAQNCLLPM 196 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~----~~~~------~~-~~~~~~~~~~~~~ 196 (462)
++++++||..|+||+.|+.++++.|+.|..|+++++|.|+||..|+.+.. .+.. -+ +..++.++ ..+|
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~-~~~M 160 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYD-KCHM 160 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhc-cCCc
Confidence 99999999999999999999999999999999999999999999953321 1111 11 11344443 3689
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcC
Q 012506 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (462)
Q Consensus 197 g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~ 276 (462)
|..+|+.+++|+|+||+||.||+.|++++..||++|+|.+||+||+++.+ +..++|++||.+++....+.+.++
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~------rg~~~v~~DEe~~k~~~~~~~~~l 234 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTK------RGETVVKKDEEPKKGSNIEKLSKL 234 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecC------CCcEEeccchhhhcccchhhhccc
Confidence 99999999999999999999999999999999999999999999998753 235689999999999999999999
Q ss_pred CCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCc
Q 012506 277 KPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 277 ~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DI 355 (462)
+|+|.. +|++|..|+|.+.|||+|+||++.+.+.++|++|+++|++|+.++.+|..+.++|..|++++|+++||+.+||
T Consensus 235 ~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdV 314 (396)
T KOG1390|consen 235 RPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDV 314 (396)
T ss_pred cceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhh
Confidence 999965 5779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
|+||+||+|+...+..+++||++|++||++||+.++|||+|+||+|.++++++-|+.+++ ++|+.++|+|||++.+++
T Consensus 315 d~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g--~~GvAaiCnGGGgasa~v 392 (396)
T KOG1390|consen 315 DYWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGG--KIGVAAICNGGGGASAMV 392 (396)
T ss_pred hHHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCC--ceeEEEEecCCCceeeEE
Confidence 999999999999999999999999999999999999999999999999999999999988 999999999999999999
Q ss_pred EEe
Q 012506 436 FER 438 (462)
Q Consensus 436 ~~~ 438 (462)
+++
T Consensus 393 iek 395 (396)
T KOG1390|consen 393 IEK 395 (396)
T ss_pred Eec
Confidence 986
No 18
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.3e-75 Score=599.37 Aligned_cols=379 Identities=37% Similarity=0.637 Sum_probs=342.0
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|||||++.||||+| ++|.|++.++.+|+.++++++|+++|+++++||.+++|++.+.+. +++.+|.+++.+|+|.++
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 579999999999998 679999999999999999999999999999999999999987764 788999999999998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC-C-CC--CCC-hhhhh--hhhhh-cc--cccHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-W-EG--SVN-PKVKA--FEQAQ-NC--LLPMGVT 199 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~-~-~~--~~~-~~~~~--~~~~~-~~--~~~~g~~ 199 (462)
|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||..|.. + .. .+. ....+ ..+.. ++ ...|+++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGIT 160 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHH
Confidence 999999999999999999999999999999999999999976531 1 10 111 00111 00111 11 1369999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++|+++||+|||+||+|+++||+||.+|+++++|++||+|++++.++ ...+++.|+.+|+.+++|.|.+++|+
T Consensus 161 a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~------~~~~~~~d~~~rp~~~~e~l~~l~p~ 234 (392)
T PRK06633 161 AENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK------TTSLFDHDETVRPDTSLEILSKLRPA 234 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC------CceeeccCCCCCCCCCHHHHccCCCc
Confidence 999999999999999999999999999999999999999999875311 11468999999999999999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
|+|.|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||++|
T Consensus 235 ~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 235 FDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred cCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 99999999999999999999999999999999999999999999999888888888888999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 360 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 360 ihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+||+|+++++++.|.||++..|||++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|++||+
T Consensus 315 i~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 315 VNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKA--KKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred hhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 99999999999999999998999999999999999999999999999999999877 999999999999999999997
No 19
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=100.00 E-value=5.3e-75 Score=598.68 Aligned_cols=380 Identities=41% Similarity=0.637 Sum_probs=338.6
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|+|||++||||+| +.|.+++.++.+|+.++++++|++ ++|++++||.+++|++++.+.++.++++.+++.+|+|.++
T Consensus 2 ~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 2 EAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred cEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 59999999999998 568899999999999999999994 7999999999999999865543578999999999998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C-CC---Chhhhh-------hhhhhc--ccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G-SV---NPKVKA-------FEQAQN--CLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~-~~---~~~~~~-------~~~~~~--~~~ 194 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.+. . .+ ...+.. .+...+ ...
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVD 160 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccC
Confidence 99999999999999999999999999999999999999998774111 0 00 000110 000011 135
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.||.++++|+++||+|||+||+||+.||++|..|+++|+|++||+||.+|.+ .+ +..++++|+.+|+++|+|++.
T Consensus 161 ~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~---~~--~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 161 SMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQK---KG--EPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred cHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccC---CC--CceeeCCCCccCCCCCHHHHh
Confidence 7999999999999999999999999999999999999999999999987621 11 113578899999999999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
+++|+|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~D 315 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQ 315 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHH
Confidence 99999999899999999999999999999999999999999999999999888888878888899999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
||++|+||+|+++++.++|.||+|+ .|||++||++++|||+|+||+++++|+++||+++++ ++||+++|+|||+|.
T Consensus 316 ID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~g~ 393 (400)
T TIGR02430 316 FDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGI 393 (400)
T ss_pred CCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhh
Confidence 9999999999999999999999976 599999999999999999999999999999999887 999999999999999
Q ss_pred EEEEEe
Q 012506 433 AAVFER 438 (462)
Q Consensus 433 A~v~~~ 438 (462)
|+|||+
T Consensus 394 a~~~e~ 399 (400)
T TIGR02430 394 ALAIER 399 (400)
T ss_pred EEEEEe
Confidence 999997
No 20
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=1.2e-74 Score=595.19 Aligned_cols=380 Identities=44% Similarity=0.669 Sum_probs=341.2
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||++||||+|...|.+++.++.+|..++++++|++ +|+++++||.+++|++.+...++.+.++.++..+|+|.+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 5799999999999985579999999999999999999996 799999999999999875544357789999999999877
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||..|......+.+.+.+.. .+....|++++++|+++||
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~yg 159 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNV--AKAAGMMGLTAEMLGKMHG 159 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhc--cccchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876432222222222211 1112479999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCcc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 287 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~t 287 (462)
++||+||+|+++||+||.+|+++|+|++||+||.++.+ . ..++++++|+.+|+++|+|+|++++|+|+| +|++|
T Consensus 160 isre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt 234 (387)
T PRK08947 160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDA---D--GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCC---C--CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEE
Confidence 99999999999999999999999999999999987532 1 123568899999999999999999999998 88999
Q ss_pred cCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 288 ~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++||+++|||++|+||+|+++
T Consensus 235 ~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~ 314 (387)
T PRK08947 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ 314 (387)
T ss_pred ccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence 99999999999999999999999999999999999999888888787788899999999999999999999999999999
Q ss_pred HHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 368 FVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.++|.|||++ +|+|++||++++|||+||||+++++++++||++++. ++||+++|+|+|+|.++||++
T Consensus 315 ~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~--~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 315 SLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CEEEEEEeecccceeEEEEEe
Confidence 999999999986 599999999999999999999999999999998765 999999999999999999987
No 21
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=1.5e-74 Score=601.75 Aligned_cols=378 Identities=36% Similarity=0.575 Sum_probs=336.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.++++++|+++||++++||.+++|++.+... +.+++|.+++.+|+|.++
T Consensus 5 ~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~~ 82 (428)
T PRK08963 5 DRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVHT 82 (428)
T ss_pred CeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCCC
Confidence 579999999999998 568899999999999999999999999999999999999876554 678899999999998679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CChh--------hhh-hh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK--------VKA-FE 187 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~~~--------~~~-~~ 187 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+.+... .... +.. .+
T Consensus 83 P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (428)
T PRK08963 83 DAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLP 162 (428)
T ss_pred cceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccc
Confidence 9999999999999999999999999999999999999999877421110 0000 000 00
Q ss_pred --h---hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccC
Q 012506 188 --Q---AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (462)
Q Consensus 188 --~---~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~ 262 (462)
. ...+...|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+||++ +|++. +++.||
T Consensus 163 ~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~---~p~a~-----~~~~D~ 234 (428)
T PRK08963 163 VPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHV---PPYKQ-----PLEEDN 234 (428)
T ss_pred cCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEe---cCCce-----eeCCCC
Confidence 0 0111246999999999999999999999999999999999999999999999987 56651 588999
Q ss_pred CCCCCCCHHHHhcCCCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-CCCccHHHH
Q 012506 263 GIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGPAVA 340 (462)
Q Consensus 263 ~~r~~~t~e~l~~~~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-~~~~~~~~A 340 (462)
.+|+++|+|++.+++|+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|. .+..++..+
T Consensus 235 ~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a 314 (428)
T PRK08963 235 NIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYA 314 (428)
T ss_pred CCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHH
Confidence 99999999999999999985 6899999999999999999999999999999999999999998876663 355677889
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchHHHHHH
Q 012506 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGARCV 403 (462)
Q Consensus 341 i~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~a~Ghp~gatG~~~~ 403 (462)
++++|+++||+++|||++|+||+|++++++++|.|| ++.+|||++||++++|||+|+||++++
T Consensus 315 ~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~ 394 (428)
T PRK08963 315 TPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMI 394 (428)
T ss_pred HHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHH
Confidence 999999999999999999999999999999999994 666799999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 404 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 404 ~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+|+++||+++++ ++||+++|+|||+|.|+|||+|
T Consensus 395 ~e~~~qLrg~~g--~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 395 TQTLHELRRRGG--GLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HHHHHHHhhcCC--CEEEEEEccccChhhEEEEEeC
Confidence 999999999988 8999999999999999999986
No 22
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.8e-74 Score=592.43 Aligned_cols=380 Identities=43% Similarity=0.704 Sum_probs=341.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ++++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~~ 79 (393)
T PRK05656 2 QDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHSV 79 (393)
T ss_pred CcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCCc
Confidence 579999999999998 578899999999999999999999999999999999999876544 677889999999997558
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-----CC-Chh-hh----h-hhhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----SV-NPK-VK----A-FEQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-----~~-~~~-~~----~-~~~~~~~~~~~g 197 (462)
|+++|+++|+||++++..|+++|++|++|++|++|+|+||..|+.... .+ ... +. + .++.. ....|+
T Consensus 80 p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a 158 (393)
T PRK05656 80 PAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAF-NDYHMG 158 (393)
T ss_pred ceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccc-cCCCHH
Confidence 999999999999999999999999999999999999999987752110 00 000 11 0 11111 124699
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||+|||+||+|+++||+||.+|+..|+|++||+|+++..+ ...+++++.||++|+++|+|.|.+++
T Consensus 159 ~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~-----~~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 159 ITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQR-----KGEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccC-----CCCceEeccCCCCCCCCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999977421 12335688999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|.|+|.+|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||+
T Consensus 234 p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 313 (393)
T PRK05656 234 PAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDL 313 (393)
T ss_pred CCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+.+++.+.|.||++++|+|++||++++|||+||||+++++++++||+.+++ +|||+++|+|||+|.|+|||
T Consensus 314 ~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~--~~gl~~~c~~gG~g~a~~~e 391 (393)
T PRK05656 314 IEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDA--KKGLATLCIGGGQGVALAIE 391 (393)
T ss_pred EEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCC--CEEEEEEcccCcceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999876 99999999999999999999
Q ss_pred ec
Q 012506 438 RG 439 (462)
Q Consensus 438 ~~ 439 (462)
+.
T Consensus 392 ~~ 393 (393)
T PRK05656 392 RD 393 (393)
T ss_pred cC
Confidence 74
No 23
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.4e-74 Score=591.78 Aligned_cols=382 Identities=40% Similarity=0.643 Sum_probs=339.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
.+|||||+.||||+| +.|.+++.++.||+.++++++|+++|+++++||.+++|++.+...++.++++.++..+|+|.++
T Consensus 2 ~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 2 LDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 579999999999998 5788999999999999999999999999999999999999876654578899999999998789
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CCC--C-hhhhhh-------hhhh--cccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GSV--N-PKVKAF-------EQAQ--NCLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~~--~-~~~~~~-------~~~~--~~~~ 194 (462)
|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||+.|..+. ... . ..+... +... ....
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND 160 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence 99999999999999999999999999999999999999998774211 000 1 111111 0001 1235
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.||+++++|+++||+|||+||+|+++||+++..+++.++|++||+|+++... .+ ...+.|+.||++|+.+|+|.|.
T Consensus 161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~-~~---~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG-RK---LPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc-cC---CCceEEecCCCCCCCCCHHHHh
Confidence 6999999999999999999999999999999999999999999999976310 11 1113588999999999999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
++||+| ++|++|.+|||+++|||+|+||+++++|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|
T Consensus 237 ~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~d 315 (401)
T PRK08131 237 KLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDD 315 (401)
T ss_pred cCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHH
Confidence 999999 4599999999999999999999999999999999999999999999888888889999999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
||++|+||+|+++++.++|.|||+ ..|||++||++++|||+||||+++++|+++||+++++ +++++++|+|+|+|.
T Consensus 316 id~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~~--~~~~~~~~~ggg~g~ 393 (401)
T PRK08131 316 MDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGL 393 (401)
T ss_pred CCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcCC--CceEEEEEecCChhh
Confidence 999999999999999999999997 4589999999999999999999999999999999977 899999999999999
Q ss_pred EEEEEec
Q 012506 433 AAVFERG 439 (462)
Q Consensus 433 A~v~~~~ 439 (462)
|+|||+.
T Consensus 394 a~i~e~~ 400 (401)
T PRK08131 394 AMVIERV 400 (401)
T ss_pred EEEEEec
Confidence 9999984
No 24
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=100.00 E-value=4.9e-74 Score=596.60 Aligned_cols=379 Identities=34% Similarity=0.555 Sum_probs=338.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.++|||||++||||+| ++|.+++.++.+|+.++++++|++++|++++||.+++|++.+... +.+.++.+++.+|+|..
T Consensus 6 ~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~ 83 (430)
T TIGR02446 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 83 (430)
T ss_pred CCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCC
Confidence 4789999999999998 579999999999999999999999999999999999999887554 57899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CChh--------hhh-h
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK--------VKA-F 186 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~~~--------~~~-~ 186 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+..... .... +.+ .
T Consensus 84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (430)
T TIGR02446 84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLM 163 (430)
T ss_pred CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhc
Confidence 99999999999999999999999999999999999999999866422110 0000 000 0
Q ss_pred h-h----hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEecc
Q 012506 187 E-Q----AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261 (462)
Q Consensus 187 ~-~----~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d 261 (462)
+ . ...+...|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+|+.. ||++ .++++|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~---np~a-----~~~~~D 235 (430)
T TIGR02446 164 PVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFP---PPYK-----QWIAED 235 (430)
T ss_pred ccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeee---cCCc-----eEeccc
Confidence 0 0 0011236999999999999999999999999999999999999999999999864 7765 258999
Q ss_pred CCCCCCCCHHHHhcCCCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC-CCCCccHHH
Q 012506 262 DGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP-AIMGVGPAV 339 (462)
Q Consensus 262 ~~~r~~~t~e~l~~~~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p-~~~~~~~~~ 339 (462)
+.+|+++|+|+|.+++|+|+| .|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+| ..+..++..
T Consensus 236 ~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~ 315 (430)
T TIGR02446 236 NNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSY 315 (430)
T ss_pred CCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHH
Confidence 999999999999999999998 589999999999999999999999999999999999999999887777 356778888
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchHHHHH
Q 012506 340 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGARC 402 (462)
Q Consensus 340 Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~a~Ghp~gatG~~~ 402 (462)
+++++|+++||+++|||++|+||+|++++++++|.|| ++.+|||++||++++|||+||||+++
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~ 395 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARM 395 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHH
Confidence 9999999999999999999999999999999999997 66669999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 403 ~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
++|+++||+++++ ++++.++|++||+|.++++|++
T Consensus 396 v~e~~~qL~g~ag--~~g~~~~~~~GG~g~a~iie~~ 430 (430)
T TIGR02446 396 ITQTLRELKRRGG--GLGLNTACAAGGLGAAMILEVE 430 (430)
T ss_pred HHHHHHHHhhcCC--CccEEEEEecCcceEEEEEEeC
Confidence 9999999999988 8999999999999999999975
No 25
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=7.8e-74 Score=591.36 Aligned_cols=380 Identities=43% Similarity=0.696 Sum_probs=337.8
Q ss_pred CcEEEEEeeecccccCC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 50 DDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~-----~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
++|+|||++||||+|.. +|+|++.++.+|+.+|+++||+++||++++||.+++|++.+...+..+.++.+....+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 57999999999999843 5899999999999999999999999999999999999988754323466777777778
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CC--ChhhhhhhhhhcccccH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SV--NPKVKAFEQAQNCLLPM 196 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~--~~~~~~~~~~~~~~~~~ 196 (462)
++.+.|+++|+++|+||++++..|+++|++|.+|++|++|+|+||+.|+.... .. ++.+.. ++.. ....|
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 159 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIE-YDLT-TGYVM 159 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCc-cccc-CCCCH
Confidence 87779999999999999999999999999999999999999999976642100 00 111111 1111 12459
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcC
Q 012506 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (462)
Q Consensus 197 g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~ 276 (462)
++++++|+++||+|||+||+|+++||+||.+|++.|+|++||+|+++. +.+ .++++++|+.+|+++|+|++.++
T Consensus 160 a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~----~~~--~~~~~npda~~r~~~t~e~~~~~ 233 (394)
T PRK06445 160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE----VEG--KKKVVDVDQSVRPDTSLEKLAKL 233 (394)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec----CCC--CceeeCCCCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999999872 222 22567889999999999999999
Q ss_pred CCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 277 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 277 ~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|+|+|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++....+|..++.++..+++++|+++||+++|||
T Consensus 234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId 313 (394)
T PRK06445 234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDID 313 (394)
T ss_pred CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcC
Confidence 99999989999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++|+||+|+++++.++|.||||++|||++||++++|||+||||+++++|+++||+.+++ ++||+++|+|+|+|.|+||
T Consensus 314 ~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~~~~gg~g~a~~~ 391 (394)
T PRK06445 314 LWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGK--DYGVATLCVGGGQGGAVVL 391 (394)
T ss_pred EEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCC--CEEEEEEcccCChhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999997665 8999999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
|+.
T Consensus 392 e~~ 394 (394)
T PRK06445 392 ERV 394 (394)
T ss_pred EcC
Confidence 973
No 26
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.2e-73 Score=586.75 Aligned_cols=378 Identities=36% Similarity=0.532 Sum_probs=338.0
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.+|++++|+++|+++++||.+++|++.+.+. +.+..+..++.+|+|.++
T Consensus 7 ~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~~ 84 (397)
T PRK06954 7 DPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLSV 84 (397)
T ss_pred CCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCCc
Confidence 689999999999998 568899999999999999999999999999999999999886654 667788888889998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CC--CC-hh-hh----hh-hhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GS--VN-PK-VK----AF-EQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~--~~-~~-~~----~~-~~~~~~~~~~g 197 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.++... .. +. .. +. +. .+.......|+
T Consensus 85 p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T PRK06954 85 GCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMG 164 (397)
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHH
Confidence 99999999999999999999999999999999999999997664211 00 00 00 11 11 11111235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||+|||+||+|+++||+|+.+++..|+|++||+|+++..+ . ...+|++|+++| .++.|.+.+++
T Consensus 165 ~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~--~----~~~~v~~D~~pr-~~~~~~l~~l~ 237 (397)
T PRK06954 165 TFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGK--K----GDTVIDRDEQPF-KANPEKIPTLK 237 (397)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccC--C----CCeEeccCCCcC-CCCHHHHhCCC
Confidence 9999999999999999999999999999999999999999999976421 1 113689999999 49999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|||+++|||+++||+++++|++++.+|++++++++.....|..+..++..+++++|+++||+++|||+
T Consensus 238 ~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~ 317 (397)
T PRK06954 238 PAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDL 317 (397)
T ss_pred CccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999998877788778888899999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|++++++++|+|||+++|||++||++++|||+||||+++++++++||+++++ +++|+++|+|||+|.|+|||
T Consensus 318 ~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g--~~~v~~~c~~gg~g~a~~~e 395 (397)
T PRK06954 318 FEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGG--KRGVASLCIGGGEATAMGIE 395 (397)
T ss_pred EehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccchhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999988 89999999999999999999
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 396 ~ 396 (397)
T PRK06954 396 L 396 (397)
T ss_pred e
Confidence 7
No 27
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-74 Score=533.47 Aligned_cols=381 Identities=40% Similarity=0.636 Sum_probs=354.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
.-|+||++-||+|+- +.|.+++.+..||..-|++.||+.+++.++.||.+|+|+++..++++.+.+|.+.+..|+|.++
T Consensus 4 kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred ceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 469999999999995 8899999999999999999999999999999999999999988888899999999999999999
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC------hhhhhhhhhhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN------PKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~g~ 198 (462)
|+.+||+.|.||-++|..+++.|.-|+.+++|++|+|+||..|+-. +.... ..+|..-....+..||++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 9999999999999999999999999999999999999999998732 22211 122222223457789999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++|++..+|.||||+.|+|+..|.+++.+++++|+|++||+|+++|.+.. +.+..-||.+|+.+|+|+|.+++|
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkg------e~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKG------EQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccC------ceeeEecCCCCccchHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999876432 234556999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+++|.+|++|+|-++|||+|||+.+++..++++++|++++++|.+.+++|.+|+++|.+||+.+|+++|++.+|||+|
T Consensus 237 vFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~ 316 (396)
T KOG1391|consen 237 VFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV 316 (396)
T ss_pred hhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+.+.+.+.+.|+|+-.++|++||+|++|||+|++|.|....++++|+++++ +||+-+.|+|||+|.|++++.
T Consensus 317 EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~--KYgiGSACIGGGQGIA~l~e~ 394 (396)
T KOG1391|consen 317 EVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGG--KYGIGSACIGGGQGIAVLIES 394 (396)
T ss_pred EechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcCC--ccccccccccCCceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998 999999999999999999986
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
.
T Consensus 395 ~ 395 (396)
T KOG1391|consen 395 T 395 (396)
T ss_pred c
Confidence 4
No 28
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.5e-72 Score=586.66 Aligned_cols=376 Identities=39% Similarity=0.646 Sum_probs=329.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ..+.++.++..+|+|.+
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 3679999999999998 467788899999999999999999999999999999998875443 45788999999999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-----------------CCC------hhhhh
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----------------SVN------PKVKA 185 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-----------------~~~------~~~~~ 185 (462)
+|.++|+++|+|+++++..|+++|++|.+|++|++|+|+||+.|+.... .+. ..+..
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLA 159 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccc
Confidence 8999999999999999999999999999999999999999986531100 000 00100
Q ss_pred h-----hhhhccc--ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 186 F-----EQAQNCL--LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 186 ~-----~~~~~~~--~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
+ +...++. ..|++++++|+++||+|||+||+|+++||+||.+|++.|+|+ ||+||+.+..|| +
T Consensus 160 ~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~~~np---------~ 229 (426)
T PRK08170 160 PVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDRDGKF---------Y 229 (426)
T ss_pred cccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecCCCCe---------e
Confidence 0 0001111 479999999999999999999999999999999999999998 999997322244 4
Q ss_pred eccCCCCCCCCHHHHhcCCCccc-CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccH
Q 012506 259 SVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 337 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~~~~p~f~-p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~ 337 (462)
..||++|+++|+|+|+++||+|+ |.|++|.+|||+++|||+|+||+++|.|++++.+|++++++++....+|..++.++
T Consensus 230 a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~ 309 (426)
T PRK08170 230 DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGP 309 (426)
T ss_pred ccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccH
Confidence 56999999999999999999998 77899999999999999999999999999999999999999999888898888888
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHH---HcCCCC--------------CCCCCCCCccccCCccchHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN---KLGLDP--------------EKINVNGGALAIGHPLGTTGA 400 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e---~LGl~~--------------~~vn~~GG~~a~Ghp~gatG~ 400 (462)
..+++++|+++||+++|||++|+||+|+++++.+++ .||||+ .|||++||.+++|||+||||+
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~ 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccH
Confidence 899999999999999999999999999999996665 666654 499999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 401 ~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.++++||+++.+ ++||+++|+|||+|.|+|||+
T Consensus 390 ~~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 390 RIVLHLLHALKRRGT--KRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHHHHHHHHhhCC--CeEEEEEecCCChhheEEEEe
Confidence 999999999999877 899999999999999999997
No 29
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.6e-72 Score=581.80 Aligned_cols=372 Identities=34% Similarity=0.553 Sum_probs=325.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.|.+.++.||+.+|++++|+++++++++||.+++|++.+... +.+.++.+++..|++..
T Consensus 6 m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~~ 83 (427)
T PRK09268 6 VRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSPY 83 (427)
T ss_pred CCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCCC
Confidence 4789999999999998 568899999999999999999999999999999999999987543 57789999999999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CC----------hhhh-
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VN----------PKVK- 184 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~----------~~~~- 184 (462)
+|.++|+++|+||++++..|+++|++|.+|++||+|+|+||+.|+.+... +. +.+.
T Consensus 84 ~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T PRK09268 84 TPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLA 163 (427)
T ss_pred CceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccccccc
Confidence 99999999999999999999999999999999999999999876532110 00 0000
Q ss_pred -hhhhhh--cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEecc
Q 012506 185 -AFEQAQ--NCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261 (462)
Q Consensus 185 -~~~~~~--~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d 261 (462)
..+... .....|+.++++|+++||+|||+||+|+++||+||.+|+++|+|++||.|+. + +++|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~--------~------~~~D 229 (427)
T PRK09268 164 PEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------G------LTRD 229 (427)
T ss_pred ccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc--------C------cccC
Confidence 000111 1124699999999999999999999999999999999999999999997752 1 6779
Q ss_pred CCCCCCCCHHHHhcCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC----CCCCc
Q 012506 262 DGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP----AIMGV 335 (462)
Q Consensus 262 ~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p----~~~~~ 335 (462)
+.+|+++|+|+|+++||+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+.++..+...+.+| ..+..
T Consensus 230 ~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~ 309 (427)
T PRK09268 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLM 309 (427)
T ss_pred CCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhc
Confidence 999999999999999999998 799999999999999999999999999999999987775555555554 34667
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH---HHcCCCC--------------CCCCCCCCccccCCccchH
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR---NKLGLDP--------------EKINVNGGALAIGHPLGTT 398 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~---e~LGl~~--------------~~vn~~GG~~a~Ghp~gat 398 (462)
++..+++++|+++||+++|||++|+||+|+++.++++ |.||||+ .|||++||.+++|||+|||
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gAT 389 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAAT 389 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccc
Confidence 8888999999999999999999999999999977666 8888873 3899999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 399 GARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 399 G~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+++++|+++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 390 G~~~v~e~~~QL~~~~~--~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 390 GGRIVATLAKLLAEKGS--GRGLISICAAGGQGVTAILER 427 (427)
T ss_pred hHHHHHHHHHHHHhcCC--CEEEEEEcccCchheEEEEeC
Confidence 99999999999999988 999999999999999999985
No 30
>PRK05790 putative acyltransferase; Provisional
Probab=100.00 E-value=7.7e-71 Score=569.64 Aligned_cols=381 Identities=48% Similarity=0.745 Sum_probs=338.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ..|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... ++++++.++..+|++.+.
T Consensus 2 ~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~~ 79 (393)
T PRK05790 2 KDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVEV 79 (393)
T ss_pred CceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCCC
Confidence 579999999999998 567888999999999999999999999999999999999876553 567777788889997568
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC-hhhhhh--hh-hhcc--cccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN-PKVKAF--EQ-AQNC--LLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~-~~~~~~--~~-~~~~--~~~~g~ 198 (462)
|.++++.+|+|++++|..|+++|++|++|+||++|+|+||+.|..+. ..+. +...+. ++ ..+. ...|++
T Consensus 80 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (393)
T PRK05790 80 PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGI 159 (393)
T ss_pred ceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHH
Confidence 99999999999999999999999999999999999999998764211 0111 001110 01 0111 246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||++||+|++|++++|+||.+|+++|+|++||+|+....+ .+++++++.|+.+|.++|.|++.+++|
T Consensus 160 ~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~-----~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 160 TAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR-----KGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC-----CCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 999999999999999999999999999999999999999999876421 133456899999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||++
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~ 314 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLI 314 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 99998999999999999999999999999999999999999999999888887777788889999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|++++++++|.||||+.|||++||++++|||+||||+++++|+++||+++++ ++||+++|+|+|+|.++|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~--~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 315 EINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGA--KKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred EeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999876 999999999999999999997
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
+
T Consensus 393 ~ 393 (393)
T PRK05790 393 P 393 (393)
T ss_pred C
Confidence 4
No 31
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.2e-70 Score=553.75 Aligned_cols=358 Identities=37% Similarity=0.599 Sum_probs=325.9
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|+|++||||+| +.|.+++.++.+|+..+++++++ |++ ++||.+++|++.+. +.+.+|.+++.+|+|.++|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence 59999999999998 67999999999999999999855 896 89999999998654 3577888999999987899
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gis 210 (462)
+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.....+.+ +.... ..|++++++|+++||++
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~------~~~~~-~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSP------ETIGD-PDMGVAAEYVAERYNIT 147 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCc------ccccC-ccHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999877421111111 01111 24999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH-hcCCCcccCCCCcccC
Q 012506 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAG 289 (462)
Q Consensus 211 re~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l-~~~~p~f~p~g~~t~~ 289 (462)
||+||+||..||+|+.+|+++|+|++||+|++. ++ |+.+|+.+|+|++ .+++|+|+|+|++|.+
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~ 212 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence 999999999999999999999999999999751 34 8899999999999 6679999999999999
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
|||+++|||+|+||++++.|++++.+|+++|++++..+.+|..+..++..+++++|+++||+++|||+||+||+|+++++
T Consensus 213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~ 292 (361)
T PRK06690 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVV 292 (361)
T ss_pred ccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHH
Confidence 99999999999999999999999999999999999888888888888899999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+++|.|||+++|+|++||++++|||+|+||+++++++++||+++++ ++|++++|+|||+|.|+|||+.
T Consensus 293 ~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~--~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 293 ACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDM--KYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred HHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCC--CEEEEEEcccCcceeEEEEEec
Confidence 9999999999999999999999999999999999999999999877 9999999999999999999985
No 32
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6.3e-69 Score=555.98 Aligned_cols=378 Identities=40% Similarity=0.644 Sum_probs=335.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.+|+|||++||||+|..+|.|++.++.||+.+|+++||+|+ ||++++||.+++|++.+...++++.++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 47999999999999855688899999999999999999997 999999999999987655443567788999999994 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC--------C--------------Chhhhhh
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS--------V--------------NPKVKAF 186 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~--------~--------------~~~~~~~ 186 (462)
+|.++|+++|+||+.++..|+++|++|.+|+|||+|+|+||..+...... + ++.|..+
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDP 160 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccc
Confidence 89999999999999999999999999999999999999998765211000 0 0112121
Q ss_pred hh---hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCC
Q 012506 187 EQ---AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDG 263 (462)
Q Consensus 187 ~~---~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~ 263 (462)
.. .......||.++++|+++||++||+|++|++++|++|..|+++++|..+|+|+.+ |.+ +.+++|+.
T Consensus 161 ~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~----p~~-----~~~~~d~~ 231 (406)
T PRK07851 161 REDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTL----PDG-----TVVSTDDG 231 (406)
T ss_pred ccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeec----CCC-----ceeCCCCC
Confidence 10 1112456799999999999999999999999999999999999999999999864 432 24677889
Q ss_pred CCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHH
Q 012506 264 IRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 343 (462)
Q Consensus 264 ~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~ 343 (462)
+|+++|+|++.+++|+|+|.|.+|.+|||+++|||+|+||++++.|++++.+|+++|.|++.....|+.+..++..++++
T Consensus 232 ~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~ 311 (406)
T PRK07851 232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQ 311 (406)
T ss_pred ccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998887777777788899999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+|+++||+++|||++|+||+|++++++++|.||||++|+|++||++++|||+|+||+++++++++||+++++ ++||++
T Consensus 312 al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~--~~g~~~ 389 (406)
T PRK07851 312 ALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDK--TFGLET 389 (406)
T ss_pred HHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCC--CeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877 899999
Q ss_pred eecccceeEEEEEEec
Q 012506 424 MCIGTGMGAAAVFERG 439 (462)
Q Consensus 424 ~~~G~G~g~A~v~~~~ 439 (462)
+|+|||+|+|+|||+.
T Consensus 390 ~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 390 MCVGGGQGMAMVLERL 405 (406)
T ss_pred EccccChhhEEEEEec
Confidence 9999999999999975
No 33
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=100.00 E-value=4.8e-68 Score=548.02 Aligned_cols=380 Identities=36% Similarity=0.566 Sum_probs=332.2
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|||++||||+| +.|.+++.++.+|+.+++++||+|+||++++||.+++|++..... +++.++.++..+|+|.+.|
T Consensus 2 ~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~p 79 (394)
T PLN02644 2 DVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPSTI 79 (394)
T ss_pred cEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCCc
Confidence 59999999999998 567888999999999999999999999999999999998765443 5567788999999976799
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC--h---hhh-hhhhhhcccccHHHH
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN--P---KVK-AFEQAQNCLLPMGVT 199 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~--~---~~~-~~~~~~~~~~~~g~~ 199 (462)
+++|+++|+||+.++.+|+++|++|++|+||++|+|+||+.+.... .... . .+. ...........|++.
T Consensus 80 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (394)
T PLN02644 80 CTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVC 159 (394)
T ss_pred eEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHH
Confidence 9999999999999999999999999999999999999997653111 0000 0 000 000001112458999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCC-ceEEeccCCCCCCCCHHHHhcCCC
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEK-PVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~-~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
+++|+++||+|||++|+|++++|+|+.+|++.++|++||+|+++..+ .++ ..+++.|+.+| .++.+.|..++|
T Consensus 160 A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~-----~~~~~~~~~~de~~~-~~~~~~l~~l~p 233 (394)
T PLN02644 160 AELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGG-----RGRPSVIVDKDEGLG-KFDPAKLRKLRP 233 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccC-----CCCCceEeecCCCcC-CCCHHHHhCCCC
Confidence 99999999999999999999999999999999999999999986421 112 23478899997 789999999999
Q ss_pred cccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 279 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 279 ~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|++ +|.+|.+|||+++||++++||++++.|++++.+|+++|+|++.....|..+..++..+++++|+++||+++|||+
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~ 313 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDY 313 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 9988 699999999999999999999999999999999999999999877666556667788999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|++++++++|.||||++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 314 ~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~--~~g~~~~~~~gg~g~a~~~e 391 (394)
T PLN02644 314 YEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVE 391 (394)
T ss_pred EEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999877 89999999999999999999
Q ss_pred ecc
Q 012506 438 RGD 440 (462)
Q Consensus 438 ~~~ 440 (462)
+.|
T Consensus 392 ~~~ 394 (394)
T PLN02644 392 LMQ 394 (394)
T ss_pred ecC
Confidence 864
No 34
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.4e-67 Score=540.28 Aligned_cols=368 Identities=39% Similarity=0.620 Sum_probs=320.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.+++.++.+|+.+|+++||+|+|+++++||.+++|++.....+..+.++.+.+..|++...
T Consensus 2 ~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 2 AEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 579999999999997 4567888999999999999999999999999999999987433322355788777889997678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC--C--CCC--CC------ChhhhhhhhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM--A--WEG--SV------NPKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~--~--~~~--~~------~~~~~~~~~~~~~~~~~g 197 (462)
|.++|+++|+||+.++..|+++|++|++|+|||+|+|+||+.++ . +.. .. ...|.++. .. ...+++
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~ 158 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRY-GD-QEVSQF 158 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhc-cC-CCCCHH
Confidence 99999999999999999999999999999999999999987653 1 110 00 01121111 11 123455
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
..+++|+++||++||+|++|++++|+||.+|+++|+|.++++|+.. +..|+++| .+|+|++.++|
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~ 223 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLK 223 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCC
Confidence 5799999999999999999999999999999999999999988641 45689999 69999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|++++ |++|.+|||+++|||+|+||+++|.|++++.+|.++|.+++....+|..+..++..+++++|+++||+++|||+
T Consensus 224 ~i~~~-~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~ 302 (382)
T PRK07801 224 PLVEG-GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDV 302 (382)
T ss_pred CCCCC-CCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCE
Confidence 99942 67999999999999999999999999999998888999988776666556667788999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+++++.++|+||||++|||++||++++|||+||||+++++|+++||++++. ++||+++|+|||++.++||+
T Consensus 303 ~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~--~~gl~~~~gggg~~~~~vl~ 380 (382)
T PRK07801 303 VEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGG--RYGLQTMCEGGGTANVTIIE 380 (382)
T ss_pred eeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999866 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 381 ~ 381 (382)
T PRK07801 381 R 381 (382)
T ss_pred e
Confidence 6
No 35
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=5.9e-67 Score=539.46 Aligned_cols=376 Identities=53% Similarity=0.828 Sum_probs=333.8
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
+|+|++||||+| +.+.+++.++.||+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|++.+.|++
T Consensus 1 ~Ivg~~~Tpf~r-~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGR-FGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 599999999998 457788899999999999999999999999999999998876665 667788899999996457999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCCh--------hhhhhhhhhc--ccccHHHHHHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNP--------KVKAFEQAQN--CLLPMGVTSEN 202 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~g~~a~~ 202 (462)
+|+.+|+|++++|..|+++|++|.+|+||++|+|+||+.+......... .+..+..... ....|++.+++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 158 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN 158 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999999998766432211110 1111111111 13458999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||++||+|++|++++|+||.+|+..++|.+||+|+.++.+ ..+.++++|+.+|+++|+|++++++|+++|
T Consensus 159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p 232 (386)
T cd00751 159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232 (386)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999976421 123467889999999999999999999999
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
.|++|.+|||+++|||+++||++++.|++++.+|+++|+|++....+|..+..++..+++++|+++||+++|||++|+||
T Consensus 233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d 312 (386)
T cd00751 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE 312 (386)
T ss_pred CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence 99999999999999999999999999999999999999999998888777777888999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+|+++++++.|.||+++.|+|++||++++|||+|+||+++++|+++||+++++ ++||+++|++||+|.++|||+
T Consensus 313 ~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 313 AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGG--RYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999977 999999999999999999986
No 36
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=100.00 E-value=3e-66 Score=533.74 Aligned_cols=374 Identities=51% Similarity=0.803 Sum_probs=329.9
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
|||+++|||+| ..|.+++.++.+|+.+|+++||+|+|++++|||.+++++..+... .+++++.++..+|++.++|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 78999999997 467788999999999999999999999999999999998876554 4667888999999964589999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CCC----hhhhhhhhhhcc--cccHHHHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVN----PKVKAFEQAQNC--LLPMGVTSE 201 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~----~~~~~~~~~~~~--~~~~g~~a~ 201 (462)
|+++|+|+++++..|+++|++|.+|+||++|+|+||+.+..... ... ..|..+....++ ...|++.++
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 99999999999999999999999999999999999876532110 010 011111111111 246999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||++||+|+++++++|+||.+|+++|.|++||+|+.++. + +.+++|++|+.+|.++|+|++++++|+++
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~--~----~~~~~~~~da~~r~~~t~e~v~~s~~i~~ 232 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKG--R----KGPVTVSTDEGIRPNTTLEKLAKLKPAFD 232 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEecc--C----CCCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 99999999999999999999999999999999999999985432 1 12457889999999999999999999999
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
|.|.+|.+|||+++|||+++||++++.|++++.+|+++|.|++.....|+.+..++..+++++|+++||+++|||++|+|
T Consensus 233 P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 233 PNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred CCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehc
Confidence 98889999999999999999999999999999999999999999887777677778899999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
|+|++.+++++|.||+...|||++||++++|||+|+||+++++|+++||++++. ++||++.|++||+|.++|||
T Consensus 313 d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 313 EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEeccCCceEEEEeC
Confidence 999999999999999988899999999999999999999999999999999865 99999999999999999986
No 37
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=100.00 E-value=1.1e-61 Score=499.31 Aligned_cols=377 Identities=41% Similarity=0.594 Sum_probs=335.7
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc--CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a--gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
+++|+|+|++||||++..+|.+++..+++|...+.+..+++. ++++.+||.+++|++.+.+.++++++|.+++.+|+|
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 368999999999999854588999999999888888888654 788889999999999988755789999999999998
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC-CCCCCC-----ChhhhhhhhhhcccccHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-AWEGSV-----NPKVKAFEQAQNCLLPMGVTS 200 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~g~~a 200 (462)
.++|.++||++|+||++|+..|+++|++|.+|++|++|+|+||+.|+ .+...+ ++.+.+..........||+++
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 77999999999999999999999999999999999999999999887 333221 111222211122235799999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCC--CCHHHHhcCCC
Q 012506 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN--TSVSELAKLKP 278 (462)
Q Consensus 201 ~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~--~t~e~l~~~~p 278 (462)
++|+++||+|||+||+|+++||+||.+|+++++| +||+|+++... .+..|+.+|.. ++.|.+.+++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~----------~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS----------PVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC----------ceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999999 99999987421 35678999998 99999999999
Q ss_pred cccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCC-CCCcc
Q 012506 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ-LDDID 356 (462)
Q Consensus 279 ~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~-~~DID 356 (462)
+|++. |..|.+|.+++.||++++++++.+.+.++++++++++.++...+.+|..| ..+..+++++|+.++|. .+|||
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 99875 79999999999999999999999999999999999999999999999998 89999999999999999 99999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--CCcEEEEEeecccc-eeEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--DCRFGVISMCIGTG-MGAA 433 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--~~~~gl~~~~~G~G-~g~A 433 (462)
+||++|+|+.+.+.+.+.+|+ .|||++||++++|||+||||+++++|+++||+++.. ..+++++++|+||| +|.+
T Consensus 309 l~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~~~~~~~~~g~~t~~~Ggg~~g~a 386 (392)
T COG0183 309 LAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVA 386 (392)
T ss_pred ceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhccccccccceeeEEEecCcceeEE
Confidence 999999999999999999999 899999999999999999999999999999998432 12799999999999 9999
Q ss_pred EEEEec
Q 012506 434 AVFERG 439 (462)
Q Consensus 434 ~v~~~~ 439 (462)
+||++.
T Consensus 387 ~vl~~~ 392 (392)
T COG0183 387 AVLERV 392 (392)
T ss_pred EEEecC
Confidence 999863
No 38
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=2.5e-59 Score=483.77 Aligned_cols=336 Identities=19% Similarity=0.284 Sum_probs=279.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||+| +.+.++.+|+.+++++||+++||++++||.+++|++.....++ .....++..+|++ ..
T Consensus 7 ~~v~IvG~g~tp~~~-----~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~-~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGE-----RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSG-KSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEeccccccc-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccc-chhHHHHHHcCCC-CC
Confidence 679999999999997 3678999999999999999999999999999999875432111 1234577789997 58
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CC-CChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GS-VNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~-~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
|.++|+.+|+||+.+|.+|++.|++|++|++||+|+|+||+.++... .. ....+..+.........|++.+++|+++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987654211 10 01112111111111235889999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 208 GVTRKEQ----DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 208 gisre~~----~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
|+++|++ +++++++|+||.+ ||++++ |.++|+|+|++++|+++|
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~-------------------np~A~~------------r~~~t~e~v~~s~~v~~P- 207 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGAR-------------------NPKAHL------------RKAVTEEQVLKAPMIAGP- 207 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhc-------------------CChhhc------------CCCCCHHHHhcCCcccCC-
Confidence 9999999 7999999999987 666543 445899999999999998
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc----------CCCCCCccHHHHHHHHHHHcCCC--
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV----------DPAIMGVGPAVAIPAAVKSAGLQ-- 351 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~----------~p~~~~~~~~~Ai~~aL~~AGl~-- 351 (462)
++.+|||+++|||+|+||++++.|++++.++.++|++++.... +|..+. .+..+++++|+++||+
T Consensus 208 --l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~ 284 (398)
T PRK06157 208 --LGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDP 284 (398)
T ss_pred --CchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCc
Confidence 8999999999999999999999999999855669999877532 222232 2457999999999998
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++|||++|+||+|++++++++|.||||++ |+|++||.+++|||+||||+++++|+++||+++
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 79999999999999999999999999984 899999999999999999999999999999998
Q ss_pred CC-----CCcEEEEEeecc
Q 012506 414 GR-----DCRFGVISMCIG 427 (462)
Q Consensus 414 ~~-----~~~~gl~~~~~G 427 (462)
++ +++++|++...|
T Consensus 365 ag~rQv~~a~~~l~~~~gg 383 (398)
T PRK06157 365 AGERQLKNPRLALTHNLGG 383 (398)
T ss_pred ccCccCCCccEEEEeccCC
Confidence 54 579999986443
No 39
>PRK06059 lipid-transfer protein; Provisional
Probab=100.00 E-value=1.4e-59 Score=486.42 Aligned_cols=349 Identities=20% Similarity=0.246 Sum_probs=290.9
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|||+++|||+|. +.++.+|+.+|+++||+++||++++||.+++++..+.....+..++.++..+|++ .
T Consensus 3 ~~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 3 PEPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 36799999999999872 4577999999999999999999999999999887655432344568899999994 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-CC-C-CChhhhhh-hhhhcccccHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-EG-S-VNPKVKAF-EQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-~~-~-~~~~~~~~-~~~~~~~~~~g~~a~~~~ 204 (462)
.|+++++.+|+|++.+|.+|+++|++|++|++||+|+|+|+...... .. . .++.|... +........|++.+++|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRM 155 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999998532111 11 1 11222211 011111246899999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
++||+++|+++.+++++|++|.. ||+++ +|+++|+|++++++|+++|
T Consensus 156 ~~yg~s~e~~a~v~~~~~~~a~~-------------------Np~A~------------~r~~~t~e~v~~s~~i~~P-- 202 (399)
T PRK06059 156 DLYGATVEDFAQVKVKNARHGLL-------------------NPNAR------------YRKEVTVEDVLASPVVSDP-- 202 (399)
T ss_pred HHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhh------------cCCCCCHHHHhcCCcccCC--
Confidence 99999999999999999999865 67665 4456899999999999998
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhc--CCCceEEEEEEEEec-cCC----CCCCcc--------------HHHHHHH
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRK--GLPILGVFRTFAAVG-VDP----AIMGVG--------------PAVAIPA 343 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~--g~~~~~~i~g~~~~~-~~p----~~~~~~--------------~~~Ai~~ 343 (462)
+|.+|||+++|||+|+||++++.|+++ +.++.++|.+++... ..+ +....+ ...++++
T Consensus 203 -l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~ 281 (399)
T PRK06059 203 -LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDA 281 (399)
T ss_pred -CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHH
Confidence 899999999999999999999999999 666777999988764 221 111121 1357999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHH
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVAT 405 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~ 405 (462)
+|+++||+++|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||+++++|
T Consensus 282 a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e 361 (399)
T PRK06059 282 AYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCE 361 (399)
T ss_pred HHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHH
Confidence 9999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHhcCC-----CCcEEEEEeecccceeEEEEEEe
Q 012506 406 LLHEMKRRGR-----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 406 ~~~qL~~~~~-----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++||+++.+ ++++||+++|+++|++.++||++
T Consensus 362 ~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 362 LTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 9999999753 56899999998889999999985
No 40
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.8e-59 Score=482.67 Aligned_cols=350 Identities=20% Similarity=0.209 Sum_probs=283.9
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHH-HHHHcCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFP 126 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~-~a~~~Glp 126 (462)
.+++|+|||+++|||+|. +.+.+..||+.+|+++||+|+||++++||.++++++..... +++.++. ++..+|++
T Consensus 14 ~m~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~ 88 (430)
T PRK06365 14 KSRDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLV 88 (430)
T ss_pred hccCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCC
Confidence 347899999999999983 35678899999999999999999999999999887654443 4555555 47899996
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-----CChhhhhhhhhhcccccHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-----VNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
..|+++|+++|+||..||..|++.|++|.+|+|||+|+|+||..++..... .++.|..+... .....|++.++
T Consensus 89 -~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~-~~~~~~al~a~ 166 (430)
T PRK06365 89 -PKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGG-FYTGYYAMMAV 166 (430)
T ss_pred -CCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccC-ccHHHHHHHHH
Confidence 489999999999999999999999999999999999999999865322111 11122221111 11134899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||+++|+|+++++++|+||.+ ||++++++ ++|+|++++++++++
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~~~------------~~t~e~v~~s~~i~~ 215 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIH-------------------NPFAQSPM------------KITVEDVRKSPMVSY 215 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhcCC------------CCCHHHHhcCCcccc
Confidence 99999999999999999999999997 78776543 479999999999988
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEE--eccCCCCCCc------------------------
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA--VGVDPAIMGV------------------------ 335 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~--~~~~p~~~~~------------------------ 335 (462)
| +|.+|||+++|||+|+||++++.|++++.+|+ +|.+.+. .+.++..+..
T Consensus 216 P---lt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (430)
T PRK06365 216 P---LTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHS 291 (430)
T ss_pred C---cchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 7 99999999999999999999999999998886 4545443 3333322111
Q ss_pred --cHHHHHHHHHHHcCCC--CCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCC
Q 012506 336 --GPAVAIPAAVKSAGLQ--LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGH 393 (462)
Q Consensus 336 --~~~~Ai~~aL~~AGl~--~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Gh 393 (462)
....+++++|+++||+ ++|||++|+||+|++++++++|+||||++ |||++||.+++||
T Consensus 292 ~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Gh 371 (430)
T PRK06365 292 FRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGH 371 (430)
T ss_pred cHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCC
Confidence 1246999999999998 89999999999999999999999999984 9999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhcCC-----------CCcEEEEEeecccc-eeEEEEEEec
Q 012506 394 PLGTTGARCVATLLHEMKRRGR-----------DCRFGVISMCIGTG-MGAAAVFERG 439 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~-----------~~~~gl~~~~~G~G-~g~A~v~~~~ 439 (462)
|+||||+++++|+++||+++++ +++++|++...|.| ...+.||+++
T Consensus 372 p~GatG~~~~~e~~~QLrG~a~~~~~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~ 429 (430)
T PRK06365 372 AVGATGIMQAVFMFWQLQGRIKKHFHDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAP 429 (430)
T ss_pred cccHHHHHHHHHHHHHHhcccCCCCCcccccCCCccEEEEecCCcccceEEEEEEecC
Confidence 9999999999999999998752 46899998644443 2234566543
No 41
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.2e-58 Score=475.49 Aligned_cols=347 Identities=18% Similarity=0.258 Sum_probs=285.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++.|||+| .++.++.+|+.+|+++||+++||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~-----~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGR-----RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 469999999999998 36889999999999999999999999999999998765432 356688899999996 46
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-----CChhhhhhhhhhcccccHHHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-----VNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+.++|+++|+|++.+|..|+++|++|.+|+|||+|+|+||+.+...... ....+...+........+++.+++|+
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999999765321100 01111110111111124678899999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
++||+++|+++++++++|++|.+ ||+++++ .++|+|+++++|++++|
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~-------------------np~a~~~------------~~i~~e~v~~s~~i~~P-- 200 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAM-------------------NPKAHFQ------------KPVTVEEVLKSRAISWP-- 200 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhc-------------------CChhhcC------------CCCCHHHHhcCCccCCC--
Confidence 99999999999999999999997 5555433 33688999999999888
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec------cCCCCCCc-cHHHHHHHHHHHcCCCCCCccE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG------VDPAIMGV-GPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~------~~p~~~~~-~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|.+|||+++|||+|+||++++.|++++.++.++|+|++... .+|+.+.. ++..+++++|+++||+++|||+
T Consensus 201 -l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~ 279 (385)
T PRK12578 201 -IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV 279 (385)
T ss_pred -ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 999999999999999999999999999977778999998752 33444443 4567999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---- 415 (462)
+|+||+|+++++.++|.||||++ |||++||++++|||+||||+++++|+++||+++++
T Consensus 280 ~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag~~qv 359 (385)
T PRK12578 280 ATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGKLQQ 359 (385)
T ss_pred EEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcccCcC
Confidence 99999999999999999999984 89999999999999999999999999999998854
Q ss_pred -C-CcEEEEEeecccce-eEEEEEE
Q 012506 416 -D-CRFGVISMCIGTGM-GAAAVFE 437 (462)
Q Consensus 416 -~-~~~gl~~~~~G~G~-g~A~v~~ 437 (462)
+ ++++|++...|.|. +.+.||+
T Consensus 360 ~~~~~~~l~~~~Gg~~~~~~~~v~~ 384 (385)
T PRK12578 360 PLKKYIGLVHNVGGTGHFAYVMILR 384 (385)
T ss_pred CcchheEEEeccCcchhhEEEEEEe
Confidence 2 36999986443332 2344554
No 42
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=100.00 E-value=3.6e-58 Score=478.47 Aligned_cols=352 Identities=21% Similarity=0.269 Sum_probs=283.1
Q ss_pred CcEEEEEeeeccc-ccC---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCccc--cCcEEEEeccCCCC-ccccH
Q 012506 50 DDVVIVAAYRTAL-CKS---K-------RGGFKDTYPDDLLAPVLKAVIEKTNVDPSE--VGDIVVGTVLAPGS-QRASE 115 (462)
Q Consensus 50 ~~v~Ivg~~rTp~-~~~---~-------~g~~~d~~~~eL~~~A~~~Al~~agl~~~~--Id~vivG~~~~~~~-~~~~~ 115 (462)
++|+|||++|||| +|. + .|.+++.++.||+.+|+++||+++||++++ ||.+++|++.+... .+.++
T Consensus 12 ~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~ 91 (438)
T PTZ00455 12 KRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHL 91 (438)
T ss_pred CceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccch
Confidence 5799999999999 873 1 577789999999999999999999999999 99999999876541 14678
Q ss_pred HHHHHHHcCCC------CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CChhhhhh
Q 012506 116 CRMAAFYAGFP------ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VNPKVKAF 186 (462)
Q Consensus 116 a~~~a~~~Glp------~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~~~~~~~ 186 (462)
++.++..+|+| ..+|.++|+++|+||+.||..|+++|++|++|+|||+|+|+||+.+.+.... ....+...
T Consensus 92 a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~ 171 (438)
T PTZ00455 92 GPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQ 171 (438)
T ss_pred HHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcccc
Confidence 89888888777 6799999999999999999999999999999999999999999876532211 00001000
Q ss_pred -h-hhhcccccHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCC-CCceEE--ec
Q 012506 187 -E-QAQNCLLPMGVTSENVAHRFG-VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGD-EKPVTI--SV 260 (462)
Q Consensus 187 -~-~~~~~~~~~g~~a~~~~~~~g-isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~-~~~~~v--~~ 260 (462)
. ........+++. .+|+++|| +|||+|++|++++|+++.. ||.+++ +++.++ ..
T Consensus 172 ~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~-------------------nP~A~~~~~~~t~~~~~ 231 (438)
T PTZ00455 172 RKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNK-------------------NPLAHMHTRKLSLEFCT 231 (438)
T ss_pred ccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhc-------------------CCHhhccCCCCCceeec
Confidence 0 000000113443 38899996 9999999999999999987 666664 233332 23
Q ss_pred cCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCc----eEEEEEEEEecc----CC--
Q 012506 261 DDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPI----LGVFRTFAAVGV----DP-- 330 (462)
Q Consensus 261 d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~----~~~i~g~~~~~~----~p-- 330 (462)
|+.+| +.| +++++++.+| ++.+|||+++|||+|+||+|++.|++++++| .++|++++..+. +|
T Consensus 232 d~~~~---~~e-~l~s~~i~~p---l~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~ 304 (438)
T PTZ00455 232 GASDK---NPK-FLGNETYKPF---LRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPD 304 (438)
T ss_pred ccccc---chh-hhcCCcccCc---CchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccc
Confidence 56666 333 3455666666 8999999999999999999999999999887 689999998865 44
Q ss_pred -CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC------------------CCCCCCCCcccc
Q 012506 331 -AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAI 391 (462)
Q Consensus 331 -~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~------------------~~vn~~GG~~a~ 391 (462)
..++.+ ..+++++|+++||+++|||++|+||+|++++++++|.||||+ .|||++||++++
T Consensus 305 ~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~ 383 (438)
T PTZ00455 305 ATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSF 383 (438)
T ss_pred cccchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhc
Confidence 333333 679999999999999999999999999999999999999998 499999999999
Q ss_pred CCccchHHHHHHHHHHHHHHhcCC-----C-CcEEEEEeecccc
Q 012506 392 GHPLGTTGARCVATLLHEMKRRGR-----D-CRFGVISMCIGTG 429 (462)
Q Consensus 392 Ghp~gatG~~~~~~~~~qL~~~~~-----~-~~~gl~~~~~G~G 429 (462)
|||+||||+++++|+++||+++++ + +++|+++...|.|
T Consensus 384 GHP~gAtG~~~v~e~~~QLrg~ag~~Qv~~~~~~gl~~~~Gg~~ 427 (438)
T PTZ00455 384 GHPVGATGVKQIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDD 427 (438)
T ss_pred CCCcchHHHHHHHHHHHHHhhccccCCCCCcccEEEEeccCCCc
Confidence 999999999999999999998764 3 5899998644433
No 43
>PRK08256 lipid-transfer protein; Provisional
Probab=100.00 E-value=4.1e-58 Score=474.33 Aligned_cols=331 Identities=23% Similarity=0.331 Sum_probs=278.1
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|||+++|||+|. + ++.+..+|+.+|+++||+|+|+++++||.+++|+..++.. . ...+...+|+. .+|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~---~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S---GQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h---hHHHHHHcCCC-CCC
Confidence 599999999999862 2 4678999999999999999999999999999998776442 1 22456688994 578
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--CCCCCC--hhh---hhhhhh----hcccccHHHH
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--WEGSVN--PKV---KAFEQA----QNCLLPMGVT 199 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--~~~~~~--~~~---~~~~~~----~~~~~~~g~~ 199 (462)
+++++++|+||+.+|..|+++|++|++|+||++|+|+|+..+.. +..... ..+ .+.+.. ......|++.
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA 152 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999865431 111000 001 000011 1112368999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++|+++||+++|+++++++++|+||.+ ||++.++ .++|+|++++++|+
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~-------------------np~A~~~------------~~~t~e~~~~s~~i 201 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAAN-------------------NPYAQFR------------DEYTLEDVLASPMI 201 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhc-------------------CChhhcC------------CCCCHHHHhcCCcc
Confidence 9999999999999999999999999997 6666443 35899999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCc----------cHHHHHHHHHHHcC
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV----------GPAVAIPAAVKSAG 349 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~----------~~~~Ai~~aL~~AG 349 (462)
++| +|.+|||+++|||+|+||++++.|+++++++.++|.|++.....|..+.. ++..+++++|+++|
T Consensus 202 ~~P---l~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag 278 (391)
T PRK08256 202 WGP---LTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAG 278 (391)
T ss_pred cCC---CcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcC
Confidence 998 99999999999999999999999999998788899999887766544332 24579999999999
Q ss_pred CCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 350 l~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
|+++|||++|+||+|++++++++|+||||++ |||++||.+++|||+||||+++++|+++||+
T Consensus 279 ~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 279 IGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred hcCC-----CCcEEEEEe
Q 012506 412 RRGR-----DCRFGVISM 424 (462)
Q Consensus 412 ~~~~-----~~~~gl~~~ 424 (462)
++++ +++++|++.
T Consensus 359 g~ag~~Qv~~~~~~l~~~ 376 (391)
T PRK08256 359 GTAGARQVEGARLALQHN 376 (391)
T ss_pred CCcCCCcCCccceEEEec
Confidence 9865 356777775
No 44
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=5e-58 Score=473.06 Aligned_cols=348 Identities=32% Similarity=0.467 Sum_probs=292.3
Q ss_pred EEeeecccccCCC---CCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHH-HHHHcCCCCCcc
Q 012506 55 VAAYRTALCKSKR---GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFPETVP 130 (462)
Q Consensus 55 vg~~rTp~~~~~~---g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~-~a~~~Glp~~~p 130 (462)
+|++||||+| +. |.+.+..+.||+.+|+++||++++|++++||.+++|+..+... ++++++. +...+|+ .++|
T Consensus 1 ~g~~~Tpfg~-~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p 77 (393)
T cd00826 1 AGAAMTAFGK-FGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAP 77 (393)
T ss_pred CccccCCCcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCc
Confidence 5889999998 44 7778889999999999999999999999999999999987765 5677775 4445666 5789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gis 210 (462)
+++|+++|+||+.++..|+.+|++|++|++|++|+|+||..+.... ..+.. ..+..+|+ +
T Consensus 78 ~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~-----------------~~~~~--~~~~~~~~-~ 137 (393)
T cd00826 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNA-----------------KEKHI--DVLINKYG-M 137 (393)
T ss_pred EEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccccc-----------------ccchh--HHHHHHhC-C
Confidence 9999999999999999999999999999999999999987542100 00000 12456788 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccccceecc--------cCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI--------VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 211 re~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~--------~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|++++.++..++.++..+++.|.++++|+||.++- +||++++ |.++|+|++++++|+|.+
T Consensus 138 r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~------------~~~~t~e~~~~~~~i~~~ 205 (393)
T cd00826 138 RACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQF------------GDEASLDEIAKLRPAFDK 205 (393)
T ss_pred hhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCC------------CCCCCHHHHhcCCCccCC
Confidence 99999999999999999999999999999997642 2454433 345899999999999955
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCC-------CceEEEEEEEEeccCCC----CCCccHHHHHHHHHHHcCCC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-------PILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-------~~~~~i~g~~~~~~~p~----~~~~~~~~Ai~~aL~~AGl~ 351 (462)
++++|.+|||+++|||+|+||+|+++|+++++ .+++++.++.....+|+ .+..++..+++++|+++||+
T Consensus 206 ~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~ 285 (393)
T cd00826 206 EDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLG 285 (393)
T ss_pred CCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCC
Confidence 56699999999999999999999999999986 33444555544455666 56678889999999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCC------------------CCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~------------------~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++|||++|+||+|++++++++|.||||+ .|||++||.+++|||+||||+++++|+++||+++
T Consensus 286 ~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ 365 (393)
T cd00826 286 IGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGE 365 (393)
T ss_pred HHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998 5999999999999999999999999999999998
Q ss_pred CCC---CcEEEEEeecccceeEEEEEE
Q 012506 414 GRD---CRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 414 ~~~---~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+++ .++++...|++||+|.++|+|
T Consensus 366 ag~~q~~~~~~~~~~~~Gg~g~a~~~~ 392 (393)
T cd00826 366 AGKRQGAGAGLALLCIGGGGGAAMCIE 392 (393)
T ss_pred hccccCCCcCEEEEEcCCCceeEEEEe
Confidence 541 245566667888889999887
No 45
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6e-58 Score=474.74 Aligned_cols=353 Identities=20% Similarity=0.258 Sum_probs=280.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc--cHHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA--SECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~--~~a~~~a~~~Glp~ 127 (462)
++|+|||+++|||+| ++.+++.++.||+.+|+++||+++||++++||.+++|+..++...+. ..........++ .
T Consensus 3 ~~v~Ivg~~~t~~~r--~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (403)
T PRK06289 3 DDVWVLGGYQSDFAR--NWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPAL-W 79 (403)
T ss_pred CcEEEEeCCcCcccc--ccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcC-C
Confidence 579999999999987 34557899999999999999999999999999999998755421111 111112233455 2
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CC-Chhhhhhh---hhhcccccHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SV-NPKVKAFE---QAQNCLLPMGVTSEN 202 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~g~~a~~ 202 (462)
..|+++++++|+||+.+|..|+.+|++|++|+|||+|+|+||..+..... .+ ...+.+.. .+......|++.+++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999875532111 01 01111110 001112348999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||++||+|+++++++|++|.+ ||++++++.++. .++|.||+..++++.+|
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~-------------------NP~A~~~~~~~~-------~~~~~~d~~~s~~i~~P 213 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARR-------------------NPNAQTRGWAFP-------DEATNDDDATNPVVEGR 213 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhhcCccccc-------cccchhhhhcCCcccCC
Confidence 9999999999999999999999987 677766544221 24788889888887666
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCC-CceEEEEEEEEeccC-------------CCCCCccHHHHHHHHHHHc
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVD-------------PAIMGVGPAVAIPAAVKSA 348 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-~~~~~i~g~~~~~~~-------------p~~~~~~~~~Ai~~aL~~A 348 (462)
+|.+|||+++|||+|+||+++|.|++++. ++.++|+|++..... |..+ ..+..|++++|+++
T Consensus 214 ---l~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~A 289 (403)
T PRK06289 214 ---LRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRA 289 (403)
T ss_pred ---CchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHc
Confidence 99999999999999999999999999987 677899999876321 2222 22567999999999
Q ss_pred CCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 349 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 349 Gl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
||+++|||++|+||+|++++++++|+||||++ |||++||.+++|||+|+||+++++|+++||
T Consensus 290 gi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QL 369 (403)
T PRK06289 290 GVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQV 369 (403)
T ss_pred CCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999985 899999999999999999999999999999
Q ss_pred HhcCC-----CCcEEEEEeecccceeEEEEE
Q 012506 411 KRRGR-----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 411 ~~~~~-----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+++++ +++.++++ |+||+++.++++
T Consensus 370 rg~ag~~Qv~~~~~~l~~-~~gg~~~~~~~~ 399 (403)
T PRK06289 370 TGTAGDYQVEGAKTFGTL-NIGGSTTTTVSF 399 (403)
T ss_pred hccccCccCCchheEEEE-ecCcccceEEEE
Confidence 99864 34566665 678777776543
No 46
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.3e-57 Score=462.81 Aligned_cols=349 Identities=18% Similarity=0.177 Sum_probs=288.5
Q ss_pred CCcEEEEEeeeccc-ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCcc-ccHHHHHHHHcCCC
Q 012506 49 GDDVVIVAAYRTAL-CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFP 126 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~-~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~-~~~a~~~a~~~Glp 126 (462)
+++|+|||+++||| .|. .+.++.+|+.+|+++||+|+||++++||.+++++. ++...+ ..++..++..+|+
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl- 74 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGA- 74 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCC-
Confidence 47899999999999 652 57789999999999999999999999999999873 322111 2445678899999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
...++++++.+|+||..++..|+++|++|.+|+|||+|+|+++.....+....++.|..+... .....|++.+++|+++
T Consensus 75 ~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~-~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 75 TGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGA-GAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCcccccccccccccccccc-chHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999764222222222223322221 1224588999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
||.++|+++++++++|++|.+ ||+++++++ ++|+|++++++|+++| +
T Consensus 154 ~G~~~e~la~vav~~~~~A~~-------------------NP~A~~r~~-----------~~t~e~v~~s~~ia~P---l 200 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAK-------------------NPYAHLHQP-----------DITLEKVMASQMLWDP---I 200 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHcc-------------------CcHHhcCCC-----------CCCHHHHhcCCcccCC---C
Confidence 999999999999999999987 888876532 3799999999999998 9
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-------CCCccHHHHHHHHHHHcCCC--CCCccE
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQ--LDDIDL 357 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-------~~~~~~~~Ai~~aL~~AGl~--~~DID~ 357 (462)
|.+|||+++|||+|+||+++++|++++.++.++|.|++... ++. ....++..+++++|+++||+ ++|||+
T Consensus 201 ~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~ 279 (386)
T PRK08313 201 RFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDV 279 (386)
T ss_pred chhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCE
Confidence 99999999999999999999999999888888999998763 332 22345568999999999998 799999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---- 415 (462)
+|+||||++++++++|.||||++ |||++||+++ |||.|+||+++++|+++||+++++
T Consensus 280 ~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlrG~ag~rQv 358 (386)
T PRK08313 280 AEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVMGKAGEHQV 358 (386)
T ss_pred EEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhcccccCCcC
Confidence 99999999999999999999987 9999999999 999999999999999999999754
Q ss_pred -CCcEEEEEeecccc-eeEEEEEEecc
Q 012506 416 -DCRFGVISMCIGTG-MGAAAVFERGD 440 (462)
Q Consensus 416 -~~~~gl~~~~~G~G-~g~A~v~~~~~ 440 (462)
+++++|++.+.|++ ....+||++++
T Consensus 359 ~~a~~~l~~~~Gg~~~~~~~~v~~~~~ 385 (386)
T PRK08313 359 DGARKALGHAYGGGSQFFSMWVVGSEK 385 (386)
T ss_pred CCccEEEEeccCCcceEEEEEEEecCC
Confidence 57899999754433 22344666553
No 47
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.8e-57 Score=466.81 Aligned_cols=347 Identities=24% Similarity=0.266 Sum_probs=277.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC-ccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-QRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~-~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||+++|||+| +.+.++.+|+.+|+++||+++|+++++||.+++|+..+... +....+..+...+|+ ..
T Consensus 2 ~~v~Ivg~g~tpfgr-----~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl-~~ 75 (389)
T PRK07516 2 MTASIVGWAHTPFGK-----LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL-RF 75 (389)
T ss_pred CcEEEEeCCcceeee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC-CC
Confidence 579999999999998 47889999999999999999999999999999998754432 112222334456677 47
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCCh-hhhhh-hh-hhcccccHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNP-KVKAF-EQ-AQNCLLPMGVTSENVA 204 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~-~~~~~-~~-~~~~~~~~g~~a~~~~ 204 (462)
.|.++|+++|+||+.||..|+++|++|++|++|++|+|+||..+..... .... .+... .. .......|++.+++|+
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~ 155 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYF 155 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999876542211 0000 11000 00 0111135999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHH----HhcCCCcc
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE----LAKLKPVF 280 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~----l~~~~p~f 280 (462)
++||+++|+++++++++|+||.+ ||+++++++ +|+|+ +.+++++.
T Consensus 156 ~~yg~~~e~~a~vav~~~~~A~~-------------------nP~A~~~~~------------~t~~~~~~~~~~~~~i~ 204 (389)
T PRK07516 156 QRYGDQSDALAMIAAKNHANGVA-------------------NPYAQMRKD------------LGFEFCRTVSEKNPLVA 204 (389)
T ss_pred HHHCCCHHHHHHHHHHHHHhhhc-------------------CChhhcCCc------------ccHHhhhhhhhcCCccc
Confidence 99999999999999999999987 677765443 45553 55667777
Q ss_pred cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-------CCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-------DPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 281 ~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-------~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
+| +|.+|||+++|||+|+||++++.|++++ + .++|.|++.... +|. ...++..+++++|+++||+++
T Consensus 205 ~p---l~~~d~~~~~DGAaa~il~s~~~a~~~~-~-~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~~ 278 (389)
T PRK07516 205 GP---LRRTDCSLVSDGAAALVLADAETARALQ-R-AVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTLD 278 (389)
T ss_pred CC---CchhhcCCcCcceEEEEEecHHHHHhcC-C-CEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCHH
Confidence 76 9999999999999999999999999995 3 458999887632 222 225667899999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 415 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~ 415 (462)
|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||+++++|+++||+++.+
T Consensus 279 did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~ag 358 (389)
T PRK07516 279 DLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAG 358 (389)
T ss_pred HCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999987 99999999999999999999999999999999854
Q ss_pred -----CCcEEEEEeecccce-eEEEEEEec
Q 012506 416 -----DCRFGVISMCIGTGM-GAAAVFERG 439 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~-g~A~v~~~~ 439 (462)
+++++|++...|.|. +...||++.
T Consensus 359 ~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~ 388 (389)
T PRK07516 359 GMQIPGAKLAGVFNMGGAAVANYVSILERV 388 (389)
T ss_pred CCcCCchheeeeeccCcccceEEEEEEEec
Confidence 578999987544432 234455543
No 48
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-56 Score=463.63 Aligned_cols=347 Identities=23% Similarity=0.323 Sum_probs=289.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc-cccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~-~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||+++|||.+ +.+.++.+|+.+|+++||+++|+++++||.+++|+..++... .+++++.++..+|++ .
T Consensus 2 ~~v~IvG~~~tp~~~-----~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~ 75 (389)
T PRK06064 2 RDVAIIGVGQTKFGE-----LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P 75 (389)
T ss_pred CcEEEEEccccccee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence 579999999999987 467899999999999999999999999999999987654421 356788899999996 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC----CCC-ChhhhhhhhhhcccccHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE----GSV-NPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~----~~~-~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
.|.++|+++|+|++.+|..|+++|++|++|++||+|.|+||..+.... ... .+.|..+ ........|++.+++|
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~al~a~~~ 154 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEF-FGATFPGLYALIARRY 154 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccc-cCCchHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999987653111 001 1112211 1111123689999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
+++||+++|+++++++++|++|.+ ||+++++ .++|+|++++++++++|
T Consensus 155 ~~~yG~s~e~~a~~a~~~~~~A~~-------------------np~a~~~------------~~~t~~~~~~s~~i~~P- 202 (389)
T PRK06064 155 MHKYGTTEEDLALVAVKNHYNGSK-------------------NPYAQFQ------------KEITVEQVLNSPPVADP- 202 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhhC------------CCCCHHHHhcCCcccCC-
Confidence 999999999999999999999987 5665443 34799999999999998
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC------CC-CCccHHHHHHHHHHHcCCCCCCcc
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP------AI-MGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p------~~-~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|.+|||+++|||+++||++++.|++++.+++ +|.|++.....+ +. ...++..+++++|+++||+++|||
T Consensus 203 --l~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 203 --LKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred --CchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999987765 999998865433 22 223456799999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--C-
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--R- 415 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--~- 415 (462)
++|+||+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||++++ +
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~ 359 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGR 359 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999874 8999999999999999999999999999999986 4
Q ss_pred ----CCcEEEEEeecccceeE-EEEEEe
Q 012506 416 ----DCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
+++++|++...|.+... ++||++
T Consensus 360 rqv~~a~~~l~~~~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 360 QQVIGAGYGLTHNVGGTGHTAVVHILSR 387 (389)
T ss_pred ccCCCccEEEEecCCCccceEEEEEEEe
Confidence 57999999754433333 445543
No 49
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=100.00 E-value=2.1e-56 Score=459.46 Aligned_cols=329 Identities=25% Similarity=0.331 Sum_probs=283.0
Q ss_pred EEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 55 vg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+|++.|||+|. .+.++.+|+.+|+++||+|+|+++++||.+++|+..+... .+++++.++..+|++ ..|.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 58999999983 4889999999999999999999999999999998876543 467889999999996 7899999
Q ss_pred cCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC--CCCC-Chhhhh--hhhhhcccccHHHHHHHHHHHhCC
Q 012506 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW--EGSV-NPKVKA--FEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 135 ~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~--~~~~-~~~~~~--~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
+++|+|++.++..|+++|++|.+|++|++|+|+|+..+... .... ...+.. ..........|++.+++|+++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999765311 1111 111110 111111234689999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccC
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~ 289 (462)
|+|+++.|++++|++|.+ ||++++++ ++|+|++.++||+++| +|.+
T Consensus 154 t~e~~~~va~~~~~~A~~-------------------np~A~~~~------------~~t~d~~~~~~~i~~p---l~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAAR-------------------NPYAQFRK------------PITVEDVLNSRMIADP---LRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCcccCC---Cchh
Confidence 999999999999999987 56664432 5799999999999988 9999
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-------CCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-------MGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-------~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
|||+++|||+++||++++.|+++ .++.++|.|++.....+.. +..++..+++++|+++||+++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999999 6677899999988765532 456778899999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----CCcE
Q 012506 363 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRF 419 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~ 419 (462)
+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||+++++ ++++
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~ 358 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARV 358 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccE
Confidence 999999999999999984 89999999999999999999999999999998753 4699
Q ss_pred EEEEee
Q 012506 420 GVISMC 425 (462)
Q Consensus 420 gl~~~~ 425 (462)
++++..
T Consensus 359 ~l~~~~ 364 (375)
T cd00829 359 GLAHNI 364 (375)
T ss_pred EEEecC
Confidence 999874
No 50
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5e-56 Score=457.00 Aligned_cols=337 Identities=17% Similarity=0.171 Sum_probs=278.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++.|||.|. .+.+..+|+.+|+++||+++|+++++||.+++++...........+..++..+|+. ..
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CC
Confidence 5799999999999983 57789999999999999999999999999999863221111234667788899984 58
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC---C-CChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---S-VNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~---~-~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
|.+.|+.+|+||..++..|+++|++|.+|+|||+|+|+|+........ . .++.+..+ ........|++.+++|++
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p-~g~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKP-LNPNLIWIFAMEMHRYMA 161 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccC-CCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998653110000 0 01111111 111112348999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+||+++|+++++++++|+||.+ ||++++++ ++|+|+++++|++.+|
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~-------------------NP~A~~r~------------~lt~e~vl~s~~ia~P--- 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALN-------------------NPYAQLGS------------KITVEDVLKSEVLVWP--- 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhcc-------------------CchhhhcC------------CCCHHHHhcCCcccCC---
Confidence 9999999999999999999987 88887654 4899999999999998
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-------CCCccHHHHHHHHHHHcCCCC--CCcc
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQL--DDID 356 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-------~~~~~~~~Ai~~aL~~AGl~~--~DID 356 (462)
+|.++||+++|||+|+||+|++.|++++.+|+ +|.+++... ++. ....++..+++++|+++|+++ +|||
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD 285 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTL-DNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEID 285 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEec-CccccccccccccHHHHHHHHHHHHHcCCCCchhhCc
Confidence 99999999999999999999999999998776 788887742 221 122234679999999999985 9999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--- 415 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--- 415 (462)
++|+||+|+++++.++|.||||++ |||++||++++|||+|+||+++++|+++||+++++
T Consensus 286 ~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~rQ 365 (392)
T PRK06065 286 VAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQ 365 (392)
T ss_pred EEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccCCc
Confidence 999999999999999999999986 99999999999999999999999999999999864
Q ss_pred --CC-cEEEEEeecccc
Q 012506 416 --DC-RFGVISMCIGTG 429 (462)
Q Consensus 416 --~~-~~gl~~~~~G~G 429 (462)
++ +++|++...|.+
T Consensus 366 v~~a~~~~l~~~~Gg~~ 382 (392)
T PRK06065 366 VKKPVHTGVAQAWGDLM 382 (392)
T ss_pred CCCccceeEEecccccc
Confidence 46 799998744443
No 51
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=7.7e-56 Score=453.58 Aligned_cols=347 Identities=18% Similarity=0.205 Sum_probs=276.4
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDP-SEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~ag-l~~-~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
+|++|+|||++.|||+|. ..+.+..+|+.+|+++||+|+| |++ +|||.+++++. ............++..+|+
T Consensus 2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~ 76 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGG 76 (385)
T ss_pred CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHccc
Confidence 467899999999999862 2578899999999999999999 997 79999988642 1111011112345577888
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--C-CCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--W-EGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--~-~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
...|.+.+ |+|+..++..|+.+|++|.+|+|||+|+|+|+..... . ....++.|..+.........|++.+++
T Consensus 77 -~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~r 152 (385)
T PRK06066 77 -AMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVK 152 (385)
T ss_pred -CCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHH
Confidence 34688887 8999999999999999999999999999998762110 0 011111121111111111246899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||+++|+++++++++|+||.+ ||++++++ ++|+||+++++++.+|
T Consensus 153 ym~~yG~t~E~lA~Vavk~r~nA~~-------------------NP~A~~r~------------~~t~edvl~S~~ia~P 201 (385)
T PRK06066 153 FMSRKGITREDLALVVEKNKKAGLS-------------------NPRASYAS------------NISLEDVLSSEYVVYP 201 (385)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCcccCC
Confidence 9999999999999999999999997 88887644 4799999999999998
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec----cCCCCCCccHH--HHHHHHHHHcCCC--CCC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----VDPAIMGVGPA--VAIPAAVKSAGLQ--LDD 354 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~----~~p~~~~~~~~--~Ai~~aL~~AGl~--~~D 354 (462)
+|.+|||+++|||+|+||++++.|++++.+|+ +|.|++... ..+..+...+. .+++++|+++||+ ++|
T Consensus 202 ---l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~D 277 (385)
T PRK06066 202 ---LTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKE 277 (385)
T ss_pred ---chhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHH
Confidence 99999999999999999999999999999888 999888743 23444444443 6999999999998 799
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-- 414 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-- 414 (462)
||++|+||+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||++++
T Consensus 278 iD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag~ 357 (385)
T PRK06066 278 VDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGA 357 (385)
T ss_pred CcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccccc
Confidence 99999999999999999999999984 7999999999999999999999999999999875
Q ss_pred --CCCcEEEEEeeccc--ceeEEEEEEe
Q 012506 415 --RDCRFGVISMCIGT--GMGAAAVFER 438 (462)
Q Consensus 415 --~~~~~gl~~~~~G~--G~g~A~v~~~ 438 (462)
.+++++|++...|. +.+...|+|+
T Consensus 358 rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 358 RQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred cCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 35789999863332 2233445553
No 52
>PRK06158 thiolase; Provisional
Probab=100.00 E-value=4.8e-56 Score=457.41 Aligned_cols=343 Identities=20% Similarity=0.224 Sum_probs=279.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||.|. .+.++.+|+.+|+++||+|+||++++||.+++++.... .+...++..+|++ ..
T Consensus 8 ~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~-----~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 8 GRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDA-----LWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCC-----CcHHHHHHHcCCC-Ce
Confidence 7899999999999873 67899999999999999999999999999999874321 2234688889995 57
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEE-eecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA-GLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~-G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+.+.++.+|+|+..++..|+++|++|.+|+|||+ |.|+++.............|..+.........|++.+++|+++||
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG 156 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYG 156 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHC
Confidence 8888999999999999999999999999999986 777776421111101111122111111122358999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+++|+++++++++|++|.+ ||++++++ ++|+|+++++||+.+| +|.
T Consensus 157 ~t~e~~a~vav~~~~~a~~-------------------NP~A~~~~------------~~t~e~vl~s~~ia~P---l~~ 202 (384)
T PRK06158 157 TTREQLAEVAVAARQWAQL-------------------NPEAFMRD------------PLTIDDVLAARMVSDP---LSV 202 (384)
T ss_pred cCHHHHHHHHHHHHHHHhc-------------------CchhhhCC------------CCCHHHHhcCCccCCC---Cch
Confidence 9999999999999999986 88887654 4799999999999998 999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc------CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV------DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~------~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
++||+++|||+|+||++++.|++++.+++ +|.+++.... .|+....+...+++++|++|||+++|||++|+||
T Consensus 203 ~d~~~~~DGAaAvVL~s~e~A~~l~~~~v-~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD 281 (384)
T PRK06158 203 RDCCLVTDGAGAVVMVRADRARDLPRPPV-YVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYD 281 (384)
T ss_pred hhcCCccCCeEEEEEecHHHHhhcCCCcE-EEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecC
Confidence 99999999999999999999999987764 8888876432 1232333456799999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----CCcE
Q 012506 363 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRF 419 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~ 419 (462)
||++++++++|.||||++ |||++||++++||| |+||+++++|+++||+++++ ++++
T Consensus 282 ~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQv~~a~~ 360 (384)
T PRK06158 282 AFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQVAGAEV 360 (384)
T ss_pred CchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCcCCCCCE
Confidence 999999999999999987 99999999999999 99999999999999998854 5789
Q ss_pred EEEEeeccccee-EEEEEEec
Q 012506 420 GVISMCIGTGMG-AAAVFERG 439 (462)
Q Consensus 420 gl~~~~~G~G~g-~A~v~~~~ 439 (462)
||++.+.|.+.. ..+||+++
T Consensus 361 gl~~~~Gg~~~~~~~~vl~~~ 381 (384)
T PRK06158 361 ALAHGNGGVLSSQATAILGTA 381 (384)
T ss_pred EEEECCCCcccceEEEEEecc
Confidence 999875443322 23466653
No 53
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=6.1e-57 Score=424.73 Aligned_cols=381 Identities=36% Similarity=0.532 Sum_probs=333.7
Q ss_pred CCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 46 SVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 46 ~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
++++..||+|...||||--. .-.++|.-+.||..++++.+|++..++.+.+|.||+|++++.-- -.|++|.+++.+|+
T Consensus 38 ~kn~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agf 115 (465)
T KOG1392|consen 38 KKNMPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGF 115 (465)
T ss_pred ccCCCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCC
Confidence 35668999999999999653 35678999999999999999999999999999999999998764 67899999999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCC-----------------------hh
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN-----------------------PK 182 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~-----------------------~~ 182 (462)
+..+|+++|..+|-|+.+|+.....+|++|.+|+++++|+|.||.+|.++.+.+. +.
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999986542111 01
Q ss_pred hhhhhh----hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 183 VKAFEQ----AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 183 ~~~~~~----~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
+..+.- .+...-.||..+.+++..|++||.+||+|+.+||.-|..|++.|+|-| +||+++.-++|+ +
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~--------t 266 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK--------T 266 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc--------e
Confidence 111100 011224589999999999999999999999999999999999999986 689988666654 3
Q ss_pred eccCCCCCCCCHHHHhcCCCcc-cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-CCCcc
Q 012506 259 SVDDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVG 336 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~~~~p~f-~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-~~~~~ 336 (462)
.+|.|||. .|+|++.+++|+| +|.|++|+.|+|.++|||.|.++|++|+|...|.+|-++++.+-....+|. .+..+
T Consensus 267 ~kdngirv-ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllg 345 (465)
T KOG1392|consen 267 IKDNGIRV-SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLG 345 (465)
T ss_pred ecCCCccc-CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecc
Confidence 47999997 8999999999999 679999999999999999999999999999999999999999988888884 56689
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHH----------cCCC-------CCCCCCCCCccccCCccchHH
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK----------LGLD-------PEKINVNGGALAIGHPLGTTG 399 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~----------LGl~-------~~~vn~~GG~~a~Ghp~gatG 399 (462)
|.++++++|++|||+.+|||.||+||+|+-+.+.-+++ +|.. .++.|.+||.+++|||.||||
T Consensus 346 pay~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatg 425 (465)
T KOG1392|consen 346 PAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATG 425 (465)
T ss_pred cccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccc
Confidence 99999999999999999999999999999987644433 3332 247999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecc
Q 012506 400 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 400 ~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.|..-...+.|+++.| +||++..|..||+|.++++|+..
T Consensus 426 vrl~mh~anrl~~e~g--qygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 426 VRLAMHSANRLKEEKG--QYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred hhhHHHHHhHHHhhcC--ceeEeehhhcCCcceEEEeeccC
Confidence 9999999999999998 99999999999999999999864
No 54
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.1e-54 Score=443.14 Aligned_cols=331 Identities=19% Similarity=0.218 Sum_probs=274.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||+|. .+.++.+|+.+|+++||+|+||+++|||.++++... . ... ...++..+|+ ...
T Consensus 5 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~-~~~-~~~~~~~lGl-~~~ 73 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA---P-GLG-PASMVDYLGL-KLR 73 (388)
T ss_pred CCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---C-Ccc-HHHHHHhCCC-CCe
Confidence 6799999999999883 678899999999999999999999999997652211 1 111 1347789999 467
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC------CCCC-CChhhhhhhhhhcccccHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA------WEGS-VNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~------~~~~-~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+...++.+|+|+..++..|+..|++|.+|+|||+|+|+++..... +... ....|..+.. ......+++.+++
T Consensus 74 ~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~Al~a~~ 152 (388)
T PRK08142 74 HVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYG-PTTHNLYAMCAMR 152 (388)
T ss_pred eeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccc-cccHHHHHHHHHH
Confidence 888999999999999999999999999999999999998643111 1100 0111222111 1122458899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||.++|+++++++++|++|.+ ||++++++ ++|+|+++++|++.+|
T Consensus 153 ym~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~r~------------~~t~e~vl~s~~Ia~P 201 (388)
T PRK08142 153 HMHEYGTTSEQLAWIKVAASHHAQH-------------------NPHAMLRD------------VVTVEDVLNSPMIADP 201 (388)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHhcc-------------------CChhhcCC------------CCCHHHHhcCCcccCC
Confidence 9999999999999999999999987 88887654 4799999999999998
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|.++||+++|||+|+||++++.|++++.++ ++|.|++... ..|+........+++++|+++||+++|||+
T Consensus 202 ---l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~ 277 (388)
T PRK08142 202 ---LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKY 277 (388)
T ss_pred ---chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 9999999999999999999999999998554 6999998753 234434345567999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC-------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE-------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~-------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--- 415 (462)
+|+||||++++++++|.||||++ |||++||.++.|||.|+||+++++|+++||+++++
T Consensus 278 ~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~r 357 (388)
T PRK08142 278 ASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAV 357 (388)
T ss_pred EEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999865 89999999999999999999999999999998752
Q ss_pred ---CCcEEEEEeecc
Q 012506 416 ---DCRFGVISMCIG 427 (462)
Q Consensus 416 ---~~~~gl~~~~~G 427 (462)
+++++|++.+.|
T Consensus 358 QV~~a~~gl~~~~Gg 372 (388)
T PRK08142 358 QVPNCDLALAHGTGG 372 (388)
T ss_pred CCCCCcEEEEeCCCC
Confidence 469999997433
No 55
>PRK07937 lipid-transfer protein; Provisional
Probab=100.00 E-value=6.7e-52 Score=420.41 Aligned_cols=326 Identities=17% Similarity=0.172 Sum_probs=260.3
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCH-HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCcccc-HHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYP-DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRAS-ECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~-~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~-~a~~~a~~~Glp~ 127 (462)
++|+|+|+++|||+|.. .+.+. .||+.+|+++||+|+||+++|||.++.++. +...+.. ........+|+..
T Consensus 2 ~~vaIvG~g~t~~~~~~----~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~ 75 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRT----DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVP 75 (352)
T ss_pred CcEEEEEeeccccccCC----CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCC
Confidence 68999999999998831 23555 899999999999999999999998865432 2111221 1223445678732
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC-C-CCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-W-EGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~-~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
..|...+++ +|..+|..|+++|++|.+|+|||+|+|+|+..... . ....++.+..+. .......|++.+++|++
T Consensus 76 ~~~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~-G~~~~~~~Al~a~~ym~ 151 (352)
T PRK07937 76 PINESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPL-WPDSVSMAGLQARAGLD 151 (352)
T ss_pred CCceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccC-CCchHHHHHHHHHHHHH
Confidence 456666663 68889999999999999999999999998642111 0 011111111111 11223458999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+||.++|+++++++++|+||.+ ||++++ | +|+||++++|++.+|
T Consensus 152 ~yG~t~e~lA~vavk~r~nA~~-------------------NP~A~~------------r--it~edvl~s~~ia~P--- 195 (352)
T PRK07937 152 AGKWTEEQMAEVAARSRADARR-------------------NPSAEP------------S--ISVDELLARPYFADP--- 195 (352)
T ss_pred HhCCCHHHHHHHHHHHHHHHhh-------------------Cchhhc------------c--CCHHHHhcCCcccCC---
Confidence 9999999999999999999997 888864 2 699999999999998
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC---ccHHHHHHHHHHHc-CCCCCCccEEEec
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSA-GLQLDDIDLFEIN 361 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~---~~~~~Ai~~aL~~A-Gl~~~DID~~eih 361 (462)
+|.+|||+++|||+|+||+++++|++++.+| ++|.|++.... +..+. ..+..+++++++++ |++++|||++|+|
T Consensus 196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~-~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIE-SPSLGARDLTRSPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeC-CccccccccccHHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 9999999999999999999999999999888 79999988543 32222 34556777888885 9999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeec
Q 012506 362 EAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCI 426 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~ 426 (462)
|+|++++++++|.|||+.+ |||++||.++ |||.|+||+++++|+++||++++. +++|++...
T Consensus 274 D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a--~~~l~~~~G 336 (352)
T PRK07937 274 APFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSA--RRALAHATS 336 (352)
T ss_pred CCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCC--CEEEEeccc
Confidence 9999999999999999764 9999999999 999999999999999999999865 999998633
No 56
>PRK07855 lipid-transfer protein; Provisional
Probab=100.00 E-value=2e-51 Score=422.86 Aligned_cols=337 Identities=16% Similarity=0.128 Sum_probs=269.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||.|. .+.++.+|+.+|+++||+|+||++++||.+++++. . . .. ...++..+|++...
T Consensus 4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~--~~--~~~l~~~lGl~~~~ 72 (386)
T PRK07855 4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T--NP--EIAVARALGIGELK 72 (386)
T ss_pred CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c--cc--HHHHHHHCCCCCCc
Confidence 6799999999999873 57889999999999999999999999999987543 1 1 11 24578899994325
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEee--cCCCCCC-CC---CC-----CCCChhhhhhhhhhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL--ESMTVNP-MA---WE-----GSVNPKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~--E~ms~~~-~~---~~-----~~~~~~~~~~~~~~~~~~~~g~ 198 (462)
+...|+.+|+|+..++..|++.|++|.+|+|||+|+ |.+.... .. .. ...++.+..+.........|++
T Consensus 73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al 152 (386)
T PRK07855 73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAM 152 (386)
T ss_pred ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHH
Confidence 667899999999999999999999999999999998 3321110 00 00 0011122221110111235899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||.++|+++++++++|+||.+ ||++++++ .++|+|+++++|+
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~-------------------NP~A~~~~-----------~~~t~e~vl~s~~ 202 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAAT-------------------NPKAWFYG-----------RPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhc-------------------ChHhhhcC-----------CCCCHHHHhcCCc
Confidence 99999999999999999999999999987 78887531 2479999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----------CC-c-cHHHHHHHHHH
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----------MG-V-GPAVAIPAAVK 346 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----------~~-~-~~~~Ai~~aL~ 346 (462)
+.+| +|.++||+++|||+|+||++++.|++++.+|+ +|.+++... ++.. +. . ....+++++|+
T Consensus 203 Ia~P---l~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~-~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~ 277 (386)
T PRK07855 203 IAEP---LRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGS-GADQYMMTSYYRDDITGLPEMGLVARQLWA 277 (386)
T ss_pred ccCC---chhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEec-CCccccccccccccccccchHHHHHHHHHH
Confidence 9998 99999999999999999999999999998886 999998743 2211 11 1 12369999999
Q ss_pred HcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHH
Q 012506 347 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 347 ~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
++||+++|||++|+||||++++++++|.||||++ ||||+||.++.|||. |+.+++|+++
T Consensus 278 ~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~ 354 (386)
T PRK07855 278 QSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVR 354 (386)
T ss_pred HcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHH
Confidence 9999999999999999999999999999999976 999999999999987 8889999999
Q ss_pred HHHhcCC----CCcEEEEEeecccceeEEEEE
Q 012506 409 EMKRRGR----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 409 qL~~~~~----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
||+++++ +++++|++. +||....++||
T Consensus 355 QLrG~a~~QV~~a~~gl~~~-~Gg~~~~~~~~ 385 (386)
T PRK07855 355 QLRGTSVNQVPGVENVLVTA-GTGVPTSGLIL 385 (386)
T ss_pred HHhCCCcccCCCCcEEEEEC-CCCccceeEEe
Confidence 9998753 568999986 44445556665
No 57
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=100.00 E-value=1.7e-51 Score=402.93 Aligned_cols=252 Identities=46% Similarity=0.712 Sum_probs=207.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++||||++.||||++ ++|.|++.++.||+.++++++|++++|++++||.+++|++.+... +++++|.+++.+|+|.+
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 5789999999999996 789999999999999999999999999999999999999998887 88999999999999989
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCCh------hhhhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVNP------KVKAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~~------~~~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+||++||.+|+..|++|++|++|++|+|+||+.|+... ..+.. .+.+......+..+||
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999887542 12222 1111112234557899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++|+++++||||||+||+||++||++|.+|+++|+|++||+||+++.++ + +++++++||++|+++|+|+|.++|
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~---g--~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK---G--EEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT---S--EEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc---c--ceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999885422 1 235899999999999999999999
Q ss_pred CcccCC-CCcccCCCCCcCCcceEEEEeCHH
Q 012506 278 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRS 307 (462)
Q Consensus 278 p~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e 307 (462)
|+|.++ |++|.+|+|+++|||+++||+++|
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999987 999999999999999999999986
No 58
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=1.4e-49 Score=420.13 Aligned_cols=349 Identities=20% Similarity=0.198 Sum_probs=275.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCC--ccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKD--TYPDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d--~~~~eL~~~A~~~Al~~agl~--~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
++.++|||+++|+|++.. .+ .++.+|+.+|+++||+|+|++ +++||.+++++..... ..+....++..+|
T Consensus 3 ~~~~~IVGvG~t~~~~~~----~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lG 76 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDD----PAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLG 76 (498)
T ss_pred CCcEEEEEeeecccccCC----cccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcC
Confidence 378999999999998731 13 389999999999999999999 9999999998765432 3455678899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--------CCCCC-C---------hhhhhh
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--------WEGSV-N---------PKVKAF 186 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--------~~~~~-~---------~~~~~~ 186 (462)
+. ..+......+|+|++.+++.|+.+|++|++|+|||+|+|+|+..+.. |.... . ......
T Consensus 77 l~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (498)
T PRK08257 77 AD-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASP 155 (498)
T ss_pred CC-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccch
Confidence 94 45555667788899999999999999999999999999998754211 11000 0 000001
Q ss_pred hhhhcc----cccHHHHHHHHHHHhCCCHHH-HHHHHH---HHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 187 EQAQNC----LLPMGVTSENVAHRFGVTRKE-QDQAAV---DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 187 ~~~~~~----~~~~g~~a~~~~~~~gisre~-~~~~a~---~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
++.... ...+++.+.+|+++||+|+|+ +++++. ++|++|.+ ||++++++
T Consensus 156 ~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~-------------------NP~A~~r~---- 212 (498)
T PRK08257 156 AELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAK-------------------NPHAWIPR---- 212 (498)
T ss_pred hhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhh-------------------CHHHhhCC----
Confidence 111111 235789999999999999998 444444 78999887 78887654
Q ss_pred eccCCCCCCCCHHHHh----cCCCcccCCCCcccCCCCC-cCCcceEEEEeCHHHHHhcCCC--ceEEEEEEEEeccCC-
Q 012506 259 SVDDGIRPNTSVSELA----KLKPVFKKDGTTTAGNSSQ-VSDGAGAVLLMKRSVAMRKGLP--ILGVFRTFAAVGVDP- 330 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~----~~~p~f~p~g~~t~~~~s~-~sDGAaAvvL~s~e~A~~~g~~--~~~~i~g~~~~~~~p- 330 (462)
++|+|+++ ++|++.+| +|+++||+ .+|||+|+||+|+++|++++++ ...++.|++......
T Consensus 213 --------~~t~eevl~~~~~~rmIa~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~ 281 (498)
T PRK08257 213 --------ERSAEEIVTPTPDNRMIAWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYD 281 (498)
T ss_pred --------CCCHHHHhcccCCCCeeeCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccc
Confidence 47999999 68899888 99999996 8999999999999999999853 245888887763221
Q ss_pred ----CCCCccH--HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC---CCCCCCCccccCCccchHHHH
Q 012506 331 ----AIMGVGP--AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGAR 401 (462)
Q Consensus 331 ----~~~~~~~--~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~---~vn~~GG~~a~Ghp~gatG~~ 401 (462)
..+...+ ..+++++|++|||+++|||++|+||||++.+++++|+||||++ |+|++||++++|||+|+||++
T Consensus 282 ~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~ 361 (498)
T PRK08257 282 ILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTH 361 (498)
T ss_pred cccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHH
Confidence 1122233 3599999999999999999999999999999999999999988 999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeecccce-eEEEEEEecc
Q 012506 402 CVATLLHEMKRRGRDCRFGVISMCIGTGM-GAAAVFERGD 440 (462)
Q Consensus 402 ~~~~~~~qL~~~~~~~~~gl~~~~~G~G~-g~A~v~~~~~ 440 (462)
+++|+++||+++.+ ++||++.++|.+. ....|++++.
T Consensus 362 ~i~E~v~QLRg~~~--~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 362 AIAEMVERLRANPG--RRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHHHHHHHhhcCC--CEEEEECCCChhhceEEEEEeCCC
Confidence 99999999999876 8999997433322 2355777764
No 59
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=100.00 E-value=9.3e-50 Score=372.33 Aligned_cols=335 Identities=22% Similarity=0.332 Sum_probs=279.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
-+|+|||++.|.|.|. |...+.+.-||+.+|+..||+|+++..++|+.-++|.+.++...|+ .+-..+|+ +..
T Consensus 6 ~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgq----raiyevgm-tgi 78 (408)
T KOG1406|consen 6 PRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQ----RAIYEVGM-TGI 78 (408)
T ss_pred ceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccch----HHHHhccc-cCc
Confidence 5899999999999985 6678889999999999999999999999999999999998765333 44557899 589
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC---CC--CCChhhhhhhh------hhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW---EG--SVNPKVKAFEQ------AQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~---~~--~~~~~~~~~~~------~~~~~~~~g~ 198 (462)
|.+.||+.|++|..++.++-+.|++|..|+||+.|+|+|++..... .+ .++..+....+ +.-....||.
T Consensus 79 pi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgn 158 (408)
T KOG1406|consen 79 PIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGN 158 (408)
T ss_pred ceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhh
Confidence 9999999999999999999999999999999999999999765421 11 11111111111 1111245788
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
....+|++||..+|.+++++.++|.+... ||+.+++++ +|+|++.+++-
T Consensus 159 agkehmekygtk~ehfakiawknhkhsvn-------------------npysqf~de------------ysldqvm~s~~ 207 (408)
T KOG1406|consen 159 AGKEHMEKYGTKPEHFAKIAWKNHKHSVN-------------------NPYSQFRDE------------YSLDQVMKSPQ 207 (408)
T ss_pred hHHHHHHHhCCCHHHHhHhhhhccccccC-------------------ChhHhhhhh------------ccHHHHhcchH
Confidence 99999999999999999999999988654 787766533 79999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCce-EEEEEEEEeccCCCCC---------Ccc-HHHHHHHHHHH
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPIL-GVFRTFAAVGVDPAIM---------GVG-PAVAIPAAVKS 347 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~-~~i~g~~~~~~~p~~~---------~~~-~~~Ai~~aL~~ 347 (462)
+|+ ++|.+.|||.+||++|.||.|+...+++|++-. .+|+|.-....+|..+ +.. ...+.++++++
T Consensus 208 v~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~ak 284 (408)
T KOG1406|consen 208 VVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAK 284 (408)
T ss_pred HHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHH
Confidence 997 499999999999999999999999999998643 2566665555555432 122 25689999999
Q ss_pred cCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 348 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
.|++|.||+++|+||||+..+++..|+||||++ -|||+||+|+-|||+||||+.|.+|+.+|
T Consensus 285 sgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwq 364 (408)
T KOG1406|consen 285 SGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQ 364 (408)
T ss_pred cCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHH
Confidence 999999999999999999999999999999987 58999999999999999999999999999
Q ss_pred HHhcCC-----CCcEEEEEee
Q 012506 410 MKRRGR-----DCRFGVISMC 425 (462)
Q Consensus 410 L~~~~~-----~~~~gl~~~~ 425 (462)
||+..+ +++.+|-|..
T Consensus 365 lrg~agkrqvpnakvalqhnl 385 (408)
T KOG1406|consen 365 LRGLAGKRQVPNAKVALQHNL 385 (408)
T ss_pred HhhhhccccCCCchhhhhhcc
Confidence 998765 5788888864
No 60
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=99.98 E-value=1.2e-32 Score=237.34 Aligned_cols=123 Identities=53% Similarity=0.895 Sum_probs=110.3
Q ss_pred CCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCC
Q 012506 314 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Gh 393 (462)
++|+++|++++..+++|..|+.+|..|++++|+++|++++|||+||+||+|+.+++.++|+||++++|||++||.+++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 394 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||||+++++++++||+++++ ++|++++|+|+|+|.|++|||
T Consensus 81 P~gasG~r~~~~l~~~L~~~~~--~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 81 PLGASGARLVVELAHQLRRRGG--RYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HTTTHHHHHHHHHHHHHHHHTT--SEEEEEEEETTTEEEEEEEEE
T ss_pred cccccccchhhhhHHHHHHhch--hhhhHHhcccceeeEEEEEEC
Confidence 9999999999999999999988 999999999999999999997
No 61
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=1.6e-28 Score=238.30 Aligned_cols=236 Identities=26% Similarity=0.321 Sum_probs=206.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ +.+.++++.+|+|++.||..|.++|
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999887654 567788999999996 7999999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|++|.+||+|+|..
T Consensus 83 ~~g~~~~~lv~~~e~~---------------------------------------------------------------- 98 (254)
T cd00327 83 QNGKADIVLAGGSEEF---------------------------------------------------------------- 98 (254)
T ss_pred HCCCCCEEEEEeccee----------------------------------------------------------------
Confidence 9999999999998760
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
..+|||+|+||++++.++++
T Consensus 99 ------------------------------------------------------------~~gdGAaa~vL~~~~~a~~~ 118 (254)
T cd00327 99 ------------------------------------------------------------VFGDGAAAAVVESEEHALRR 118 (254)
T ss_pred ------------------------------------------------------------eecceEEEEEECcHHHHHHC
Confidence 04899999999999999999
Q ss_pred CCCceEEEEEEEEeccCCC----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCC---CCCC
Q 012506 313 GLPILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK---INVN 385 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p~----~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~---vn~~ 385 (462)
+.+++.++.++......+. .....+..+++++|+++|++++|||+|++|++++.+.....+.+++++++ +|+.
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (254)
T cd00327 119 GAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVS 198 (254)
T ss_pred CCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCcee
Confidence 9999999999887654433 22345678999999999999999999999999999888888888887654 4789
Q ss_pred CCccccCCccchHHHHHHHHHHHHHHhc-------CCCCcEEEEEeecccceeEEEEE
Q 012506 386 GGALAIGHPLGTTGARCVATLLHEMKRR-------GRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 386 GG~~a~Ghp~gatG~~~~~~~~~qL~~~-------~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++...+||+.+|++..++.+++.+++.+ .+ +..+..+++.||.+.+++|
T Consensus 199 ~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 199 ATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREP--RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCc--CEEEEeeEcCCCcceEEEC
Confidence 9999999999999999999999999986 44 7888888777777777664
No 62
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.96 E-value=5.9e-28 Score=250.78 Aligned_cols=272 Identities=22% Similarity=0.276 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|++++++|. +++|+..+... .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4689999999999999999999987 66665322100 001234568888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|.++++++|+|++.||..|+++|++|++|++||+|+|++... . ...+..+.+++.
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~-~--------------------~~~~~~~~~~ls 207 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITP-L--------------------GIAGFAAMKALS 207 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCH-H--------------------HHHHHHHhCccc
Confidence 68999999999999999999999999999999999999986541 0 000100000000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+++. +|. . ..+| |+.
T Consensus 208 ~~~~-------------------------------------~~~------------~------------~~~p-fd~--- 222 (407)
T TIGR03150 208 TRND-------------------------------------DPE------------K------------ASRP-FDK--- 222 (407)
T ss_pred CCCC-------------------------------------CCC------------c------------CCCC-CcC---
Confidence 0000 000 0 1123 322
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|+++|++++|||++|+
T Consensus 223 --~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~ 300 (407)
T TIGR03150 223 --DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINA 300 (407)
T ss_pred --CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 11333479999999999999999999999999999987652 34344456788999999999999999999999
Q ss_pred cCCCH----HHHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------
Q 012506 361 NEAFA----SQFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------- 414 (462)
Q Consensus 361 hdafa----~~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------- 414 (462)
|++++ ..+...+ +.+|-...+++++..+..+|||.||+|+.+++.++.+|+++.
T Consensus 301 h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~ 380 (407)
T TIGR03150 301 HGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN 380 (407)
T ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC
Confidence 99999 5555554 456665444444444445799999999999999999999831
Q ss_pred --C--CCcEEEEEeecccceeEEEEE
Q 012506 415 --R--DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 415 --~--~~~~gl~~~~~G~G~g~A~v~ 436 (462)
. ..++++++.+..||.+.++||
T Consensus 381 ~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 381 EARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred CCccCCcCEEEEecccCCCceEEEEe
Confidence 1 236888887776777777776
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.96 E-value=1.5e-27 Score=248.35 Aligned_cols=276 Identities=21% Similarity=0.278 Sum_probs=203.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
....|+.+++.+||+|+|++++++| ++++|+..+.. ......+..++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3467899999999999999999998 46676543210 001124557888999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|.++++++|+|++.||..|+++|++|++|++||+|+|.++... ...+..+
T Consensus 151 l--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~---------------------~~~~~~~---- 203 (411)
T PRK07314 151 A--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPL---------------------GIAGFAA---- 203 (411)
T ss_pred C--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHH---------------------HHHHHHH----
Confidence 9 689999999999999999999999999999999999999865310 0001000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.++... ...||.. . .+| |+.
T Consensus 204 ---------------------~~~ls~------------~~~~p~~------------~------------~~p-fd~-- 223 (411)
T PRK07314 204 ---------------------ARALST------------RNDDPER------------A------------SRP-FDK-- 223 (411)
T ss_pred ---------------------hccccC------------CCCCCCc------------C------------cCC-CcC--
Confidence 000000 0012221 1 123 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++++.|+++|.+++++|.|++... ..|..++.+...+++++|+++|++++|||++|
T Consensus 224 ---~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~ 300 (411)
T PRK07314 224 ---DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYIN 300 (411)
T ss_pred ---CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 1245558999999999999999999999999999998865 34555566678899999999999999999999
Q ss_pred ecCCCHH-H---HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS-Q---FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~-~---~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|++++. . +... .+.+|....++++++.+..+|||.||+|+.+++..+.+|+++.-
T Consensus 301 ~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~ 380 (411)
T PRK07314 301 AHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP 380 (411)
T ss_pred ccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccC
Confidence 9999883 2 3322 33456555567777777778999999999999999999998620
Q ss_pred ------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.+..||.+.++||++.
T Consensus 381 ~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 381 NEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred CcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 237788888888888999998864
No 64
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=4.2e-27 Score=245.97 Aligned_cols=272 Identities=19% Similarity=0.315 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~I-d----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~G 124 (462)
...|+..++++||+++|++++++ + ++++|+..+... . ....+..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45688899999999999988777 4 467776533210 0 0123556888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHH-HHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVT-SENV 203 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-a~~~ 203 (462)
+ ++|.++++++|+|++.||..|+.+|++|++|++||+|+|.+... . ...+.. ...+
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~-~--------------------~~~~f~~~~~l 218 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDR-V--------------------SLAGFAAARAL 218 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCH-H--------------------HHHHHHHcccc
Confidence 9 68999999999999999999999999999999999999986430 0 000000 0000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK- 282 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p- 282 (462)
..+|+.+ | ++ ..+| |+.
T Consensus 219 ~~~~~~~-------------------------------------p------------~~------------~~~P-fd~~ 236 (424)
T PRK06333 219 STRFNDA-------------------------------------P------------EQ------------ASRP-FDRD 236 (424)
T ss_pred cccCCCC-------------------------------------C------------Cc------------CCCC-CCCC
Confidence 0000000 0 11 1234 433
Q ss_pred -CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 283 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 283 -~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|.+ ++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|+++||+++|||
T Consensus 237 ~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId 309 (424)
T PRK06333 237 RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQ 309 (424)
T ss_pred CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCC
Confidence 3443 79999999999999999999999999999988643 2333345667899999999999999999
Q ss_pred EEEecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------
Q 012506 357 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------- 414 (462)
Q Consensus 357 ~~eihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------- 414 (462)
++|.|++++. .+...++ .+| ...++++++++..+|||+||+|+.+++.++.+|+++.
T Consensus 310 ~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~ 388 (424)
T PRK06333 310 HLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGL 388 (424)
T ss_pred EEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccc
Confidence 9999999997 5665554 456 3457899999999999999999999999999999831
Q ss_pred ---------CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
...++++++....||.+.++||++.
T Consensus 389 ~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 389 DVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred ccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 0247888888777788888888764
No 65
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.95 E-value=7.6e-26 Score=236.12 Aligned_cols=277 Identities=19% Similarity=0.292 Sum_probs=201.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCC-ccccCcEEEEeccCCCCcc-----------------------------ccHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVD-PSEVGDIVVGTVLAPGSQR-----------------------------ASECRMAA 120 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~-~~~Id~vivG~~~~~~~~~-----------------------------~~~a~~~a 120 (462)
++....+|+..++++||+++|++ +++++...+|.+.+....+ ...+..++
T Consensus 73 ~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 152 (421)
T PTZ00050 73 RESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVA 152 (421)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHH
Confidence 34556899999999999999998 7777764444443322100 12355678
Q ss_pred HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHH
Q 012506 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTS 200 (462)
Q Consensus 121 ~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a 200 (462)
..+|+ ++|.+++.++|+|+++||..|+++|++|++|++||+|+|.+.. |.. ..+.
T Consensus 153 ~~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~--------------------~~~f-- 207 (421)
T PTZ00050 153 IKHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVS--------------------FAGF-- 207 (421)
T ss_pred HHhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHH--------------------HHHH--
Confidence 88899 6899999999999999999999999999999999999998543 100 0000
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcc
Q 012506 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280 (462)
Q Consensus 201 ~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f 280 (462)
.+. +.+.... ..+| ++. .+| |
T Consensus 208 ----------------------~~~------~~l~~~~------~~~p------------~~~------------~~p-f 228 (421)
T PTZ00050 208 ----------------------SRM------RALCTKY------NDDP------------QRA------------SRP-F 228 (421)
T ss_pred ----------------------Hhh------hccccCc------CCCC------------Ccc------------CCC-C
Confidence 000 0000000 0011 111 123 4
Q ss_pred cC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHH-cCCCC
Q 012506 281 KK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS-AGLQL 352 (462)
Q Consensus 281 ~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~-AGl~~ 352 (462)
+. +|. .++|||+++||++++.|+++|.+++++|+|++.... .|..++.++..+++++|++ |||++
T Consensus 229 d~~~~G~-------~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~ 301 (421)
T PTZ00050 229 DKDRAGF-------VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANINI 301 (421)
T ss_pred cCCCCCE-------eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCCh
Confidence 43 343 379999999999999999999999999999998764 4555667788999999999 99999
Q ss_pred CCccEEEecCCCHH----HHH-HHHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----------
Q 012506 353 DDIDLFEINEAFAS----QFV-YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----------- 415 (462)
Q Consensus 353 ~DID~~eihdafa~----~~~-~~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----------- 415 (462)
+|||++|+|++++. .+. .+.+.+|-.. +++.++.-+..+||++||+|+.+++.++..|+.+.-
T Consensus 302 ~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~ 381 (421)
T PTZ00050 302 NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDA 381 (421)
T ss_pred hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCC
Confidence 99999999999983 232 3334455432 456666667779999999999999999999997520
Q ss_pred ----------------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ----------------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ----------------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.|+..+..||.+.++||++
T Consensus 382 ~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 382 ECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 12677888877788888998875
No 66
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.94 E-value=5e-25 Score=223.13 Aligned_cols=272 Identities=16% Similarity=0.251 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--ccccCcEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPE 127 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~--~~~Id~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Glp~ 127 (462)
...++..++++||+++|+. ++.+ ++++|+..+... .+ ...+..++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4578888999999999974 3333 577776544321 01 1246678889999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|.+++.++|+|++.||..|++.|++|++|++||+|+|...... ...+...-
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~---------------------~~~~f~~~------ 133 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTV---------------------SLAGFAAA------ 133 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHH---------------------HHHHHHHh------
Confidence 689999999999999999999999999999999999999853300 00000000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGT 285 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~ 285 (462)
++.. . .+. .+| ++. .+| ||. +|+
T Consensus 134 ----------------~~ls---~-~~~----------~~p------------~~~------------~rP-Fd~~r~G~ 158 (342)
T PRK14691 134 ----------------RALS---T-HFN----------STP------------EKA------------SRP-FDTARDGF 158 (342)
T ss_pred ----------------hhhh---c-CCC----------CCC------------CcC------------CCC-CCCCCCCc
Confidence 0000 0 000 011 111 234 654 455
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+ ++|||+++||++++.|+++|.+++++|+|++..... |...+.++..+++++|+++||+++|||++|.
T Consensus 159 v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIea 231 (342)
T PRK14691 159 V-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNA 231 (342)
T ss_pred c-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4 899999999999999999999999999999987654 4455677889999999999999999999999
Q ss_pred cCCCHHH----HHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFASQ----FVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~~----~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|++++.. |...++ .+|-. .++.++.-+-.+||++||+|+.+++..+..|+++.-
T Consensus 232 HgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~ 310 (342)
T PRK14691 232 HATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA 310 (342)
T ss_pred cCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc
Confidence 9999964 444443 45642 233333334459999999999999999989887520
Q ss_pred ------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++.|+..+..||.+.++||++.
T Consensus 311 ~~~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 311 GNAQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCCccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 136788888788888889998764
No 67
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.94 E-value=5.1e-25 Score=222.19 Aligned_cols=275 Identities=20% Similarity=0.153 Sum_probs=201.8
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC----ccccCcEEEEeccCCCC----------------
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD----PSEVGDIVVGTVLAPGS---------------- 110 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~----~~~Id~vivG~~~~~~~---------------- 110 (462)
+++|+|.+.+ ..+|+.+|++++|+++|++ +++||.|++|+..+...
T Consensus 1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (332)
T cd00825 1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV 66 (332)
T ss_pred CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence 3789999987 6799999999999999999 99999999998755431
Q ss_pred ----ccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhh
Q 012506 111 ----QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAF 186 (462)
Q Consensus 111 ----~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~ 186 (462)
..+..+..++..+|+ +.|+++++.+|+|++.||..|.++|++|++|.+||+|+|.++.... .
T Consensus 67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~-----------~- 132 (332)
T cd00825 67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD-----------C- 132 (332)
T ss_pred hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHH-----------H-
Confidence 023356789999999 6899999999999999999999999999999999999998765100 0
Q ss_pred hhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCC
Q 012506 187 EQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRP 266 (462)
Q Consensus 187 ~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~ 266 (462)
.+. ...+.. +|.. .
T Consensus 133 --------~~~-------~~~~~~------------------------------------~~~~------------~--- 146 (332)
T cd00825 133 --------EFD-------AMGALS------------------------------------TPEK------------A--- 146 (332)
T ss_pred --------HHH-------hhcccc------------------------------------CCCC------------C---
Confidence 000 000000 1110 0
Q ss_pred CCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHH
Q 012506 267 NTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAI 341 (462)
Q Consensus 267 ~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai 341 (462)
.+| |+. ..++..++||++|+||++++.|++++.++++++.++......... .......++
T Consensus 147 ---------~~~-~~~-----~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (332)
T cd00825 147 ---------SRT-FDA-----AADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAA 211 (332)
T ss_pred ---------CCC-CCC-----CCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHH
Confidence 012 221 234556899999999999999999999999999998865332211 123456799
Q ss_pred HHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhc-----
Q 012506 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR----- 413 (462)
Q Consensus 342 ~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~----- 413 (462)
+++|+++|++++|||++++|+.+........+.+++.. ++++.......+||+.++++..++++++.+++.+
T Consensus 212 ~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~ 291 (332)
T cd00825 212 KEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPS 291 (332)
T ss_pred HHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999998764332223333221 1344444556699999999999999999999987
Q ss_pred --------------------CCCCcEEEEEeecccceeEEEEE
Q 012506 414 --------------------GRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 414 --------------------~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
.+ ++.++..+..||...++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 292 IHIEELDEAGLNIVTETTPREL--RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCCcccCcccCCCCCCCC--CEEEEeeecCCCeeEEEeC
Confidence 34 7888887666665556553
No 68
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.93 E-value=1.8e-24 Score=226.78 Aligned_cols=274 Identities=19% Similarity=0.244 Sum_probs=194.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc-----ccCcEEEEeccCCCCc-------------------------cccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPS-----EVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~-----~Id~vivG~~~~~~~~-------------------------~~~~a~~~a~~~ 123 (462)
....|+..|+.+||+++|+++. +..++++|+..+.... ....+..++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3567889999999999998642 3557888875432100 012355788899
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH-H
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE-N 202 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~-~ 202 (462)
|+ ++|.++|+++|+|++.||..|+++|++|++|++||+|+|.+... . ...+.... .
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~-~--------------------~~~~~~~~~~ 228 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDA-L--------------------SIAGFSRSRA 228 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCH-H--------------------HHHHHHHhhh
Confidence 99 68999999999999999999999999999999999999975320 0 00000000 0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
+..+++. +|. + ..+| |+.
T Consensus 229 l~~~~~~-------------------------------------~p~------------~------------~~~p-fd~ 246 (437)
T PLN02836 229 LSTKFNS-------------------------------------CPT------------E------------ASRP-FDC 246 (437)
T ss_pred hhcccCC-------------------------------------Ccc------------c------------ccCC-ccc
Confidence 0000000 111 0 1223 332
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
..+...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|++|||+++|||+
T Consensus 247 -----~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ 321 (437)
T PLN02836 247 -----DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDY 321 (437)
T ss_pred -----CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCE
Confidence 12334479999999999999999999999999999988653 23333344567999999999999999999
Q ss_pred EEecCCCHHH----HHHHH-HHcCCC----CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------
Q 012506 358 FEINEAFASQ----FVYCR-NKLGLD----PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------- 415 (462)
Q Consensus 358 ~eihdafa~~----~~~~~-e~LGl~----~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------- 415 (462)
+|.|++++.. +...+ +.+|-. ..+|+..+|. +||++||+|+.+++.++.+|+++.-
T Consensus 322 ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~--~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~ 399 (437)
T PLN02836 322 VNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGA--TGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIF 399 (437)
T ss_pred EEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCccc--ccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 9999999953 33333 334432 2356667665 6999999999999999999998620
Q ss_pred -------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 -------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 -------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..+++|+.....||.+.++||++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 400 DDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 126778877777888889998764
No 69
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.93 E-value=2.3e-24 Score=224.27 Aligned_cols=271 Identities=18% Similarity=0.277 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
..++..++.+||+++|+++...+ ++++|+..+... . ....+..++..+|+
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl- 153 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL- 153 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC-
Confidence 45788899999999999765544 577887543210 0 01256778889999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|.++++++|+|+++||..|+++|++|++|++||+|+|..... . ...+.
T Consensus 154 -~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-~--------------------~~~~f-------- 203 (414)
T PRK08722 154 -RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTP-L--------------------GMAGF-------- 203 (414)
T ss_pred -CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H--------------------HHHHH--------
Confidence 68999999999999999999999999999999999999986441 0 00000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CC
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DG 284 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g 284 (462)
.. . +.+. + +..+| ++ ..+| |+. +|
T Consensus 204 ----------------~~-~-----~~ls----~---~~~~p------------~~------------~~rp-fd~~~~G 229 (414)
T PRK08722 204 ----------------GA-A-----KALS----T---RNDEP------------QK------------ASRP-WDKDRDG 229 (414)
T ss_pred ----------------HH-c-----CCcc----c---CCCCC------------cc------------ccCc-CcCCCCc
Confidence 00 0 0000 0 00011 11 1244 543 44
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
++ ++||++++||++++.|+++|.+++++|.|++..+. .|+..+.+...+++++|+++||+++||||+|
T Consensus 230 ~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie 302 (414)
T PRK08722 230 FV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVN 302 (414)
T ss_pred eE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 44 89999999999999999999999999999998653 3444444567899999999999999999999
Q ss_pred ecCCCHH----HHHHHHH-HcCCC-CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------
Q 012506 360 INEAFAS----QFVYCRN-KLGLD-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------ 415 (462)
Q Consensus 360 ihdafa~----~~~~~~e-~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------ 415 (462)
.|++++. .|...++ .+|-. .+++.++.-+-.+||+++|+|+.+++.++..|+++.-
T Consensus 303 ~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v 382 (414)
T PRK08722 303 AHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLV 382 (414)
T ss_pred ccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccC
Confidence 9999985 3444443 45532 2333333334449999999999999999999997520
Q ss_pred --------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 --------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 --------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.++.....||.+.++||++
T Consensus 383 ~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 383 PHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 13677777777777888888865
No 70
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=2.2e-25 Score=216.96 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=187.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc---ccC----cEEEEeccCCCCc-----------c--------------ccHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGSQ-----------R--------------ASECRMAAF 121 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~---~Id----~vivG~~~~~~~~-----------~--------------~~~a~~~a~ 121 (462)
++..|+..|.++||+++++.+. +.| +|.+|+-+++... + ...+.+++.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3456889999999999998664 333 5777766555310 0 123567888
Q ss_pred HcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 122 ~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
.+|+ .+|.+.+.++|++|..+|..+++.|+.|.+|++|++|.|+--. |.++.
T Consensus 173 ~~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~------------------------Plsla-- 224 (440)
T KOG1394|consen 173 KYGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN------------------------PLSLA-- 224 (440)
T ss_pred hhcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec------------------------chhhh--
Confidence 9999 7899999999999999999999999999999999999998422 22110
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
| .++.+|.. ++-+||+. .+|| ||
T Consensus 225 ------G-----------F~r~RALS---------------t~nd~P~~------------------------aSRP-fD 247 (440)
T KOG1394|consen 225 ------G-----------FSRARALS---------------TRNDNPQK------------------------ASRP-FD 247 (440)
T ss_pred ------h-----------HHHHHHhh---------------hcCCCccc------------------------cCCC-Cc
Confidence 0 11122211 11124542 2456 66
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
+ +|++ ++||++.+||++.|+|+++|.+|+++++||+.++ ..|+..+.+...+|+++|++|||+|+|
T Consensus 248 ~~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~ 320 (440)
T KOG1394|consen 248 KKRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPED 320 (440)
T ss_pred cCCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhh
Confidence 5 6776 8999999999999999999999999999999876 578888999999999999999999999
Q ss_pred ccEEEecCCCHHH----HHHHHH-HcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 355 IDLFEINEAFASQ----FVYCRN-KLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 355 ID~~eihdafa~~----~~~~~e-~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
|||++.|...+.. +..++. .|+-... +||.+.|+ +||-+||.|+.+.+..+..++..
T Consensus 321 i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKga--iGHLLGAAGavEAi~Tv~ai~~~ 384 (440)
T KOG1394|consen 321 IDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGA--IGHLLGAAGAVEAIFTVLAINDG 384 (440)
T ss_pred cCeeecccccCcCchHHHHHHHHHHhccCCcccccccccch--hhhhcccccchhhHhhhhhhhcC
Confidence 9999999988854 333333 3443322 57877776 79999999999988888887764
No 71
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=9.2e-24 Score=217.11 Aligned_cols=274 Identities=23% Similarity=0.309 Sum_probs=202.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-ccccC---cEEEEeccCCCCc-----------c---------------ccHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVD-PSEVG---DIVVGTVLAPGSQ-----------R---------------ASECRMAAFY 122 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~-~~~Id---~vivG~~~~~~~~-----------~---------------~~~a~~~a~~ 122 (462)
.....|+..|+++||+++|++ ..+.+ ++++|+..+.... + ...+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 366889999999999999997 34443 3555654443220 0 1236678889
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecC-CCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES-MTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~-ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
+|+ ..|.+++.++|+|+.+||..|+++|+.|++|++|++|+|. .+.
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~------------------------------- 195 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITP------------------------------- 195 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCH-------------------------------
Confidence 999 6899999999999999999999999999999999999988 322
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+.+..|.. -+|.. .. . ++|+. .+|| |+
T Consensus 196 ----------~~i~gF~a---m~Als---t~--n----------d~p~~------------------------asrP-fd 222 (412)
T COG0304 196 ----------LGIAGFEA---MRALS---TR--N----------DDPEK------------------------ASRP-FD 222 (412)
T ss_pred ----------HHHHHHHH---HHHhc---cC--C----------CCccc------------------------cCCC-CC
Confidence 00111110 00000 00 0 02221 2345 54
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
. +|++ +++|++++||++.|+|+++|.+++++|+|++... ..|...+.+..++++.+|+++||+++|
T Consensus 223 ~~RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~ 295 (412)
T COG0304 223 KNRDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPED 295 (412)
T ss_pred CCCCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhH
Confidence 4 6766 8999999999999999999999999999999875 467777889999999999999999999
Q ss_pred ccEEEecCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------
Q 012506 355 IDLFEINEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------- 415 (462)
Q Consensus 355 ID~~eihdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------- 415 (462)
|||+..|...+. .+...++. +|-...++.++.-+..+||++||+|+.+.+-.+..|+...-
T Consensus 296 idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~ 375 (412)
T COG0304 296 IDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAA 375 (412)
T ss_pred CCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccc
Confidence 999999987773 46666664 46444444555556669999999999999999999995410
Q ss_pred ------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..+++|....+.||.+.+++|.+.
T Consensus 376 ~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 376 DLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred cccccCCcccccceeEEEecccccCCcceEEEEecC
Confidence 125666666666667778888765
No 72
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.92 E-value=1.6e-24 Score=226.41 Aligned_cols=269 Identities=22% Similarity=0.287 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceE
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
...|+.+++++||+++|+++++|| .+++|+...+.. .....+..++..+|+ +.|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 345899999999999999999999 788887543221 012345678889999 57999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+++.+|+|+++||..|+++|++|++|++||+|+|.+..... ..+.
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~---------------------~~~~-------------- 209 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT---------------------FVGF-------------- 209 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH---------------------HHHH--------------
Confidence 99999999999999999999999999999999998643100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
.. .+.. ++++. .+| |+. ..+..
T Consensus 210 ----------~~------~~~l------------------------~~~~~------------~~p-f~~-----~~~g~ 231 (424)
T smart00825 210 ----------SR------AGML------------------------SPDGR------------CKT-FDA-----DADGY 231 (424)
T ss_pred ----------hh------cCCC------------------------CCCCC------------CCC-CCC-----CCCcc
Confidence 00 0000 00111 122 322 11333
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH-
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS- 366 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~- 366 (462)
.++|||+++||++++.|++++.+++++|.|++........ .+.+...+++++|+++||+++|||+++.|++++.
T Consensus 232 ~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~ 311 (424)
T smart00825 232 VRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPL 311 (424)
T ss_pred cccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCC
Confidence 4799999999999999999999999999999876432211 1223467999999999999999999999988774
Q ss_pred ---HHHHHH-HHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 367 ---QFVYCR-NKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 367 ---~~~~~~-e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
.+...+ +.+|... .++.+++-+..+||+++|+|+.+++.++.+|+.+.-
T Consensus 312 ~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 391 (424)
T smart00825 312 GDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPT 391 (424)
T ss_pred CCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccC
Confidence 233233 4455432 233333333337999999999999999999997520
Q ss_pred ---------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ---------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ---------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.++..+..||.+.++||+.
T Consensus 392 ~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 392 EATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred CCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 13566777666677778887764
No 73
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.92 E-value=1.3e-23 Score=217.95 Aligned_cols=273 Identities=23% Similarity=0.318 Sum_probs=194.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|++++++|. +++|+..+.. ......+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 45789999999999999999988875 6666543321 001235678899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|.++++.+|+|+++||..|+++|++|++|.+||+|+|.++.. +.+..
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p------------------------~~~~~---- 199 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITP------------------------LTLAG---- 199 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCH------------------------HHHHH----
Confidence 9 57999999999999999999999999999999999999987531 00000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+... +.+... ..+| +.. .+| |+.
T Consensus 200 -----------------~~~~------~~l~~~-------~~~p------------~~~------------~~p-f~~-- 222 (406)
T cd00834 200 -----------------FAAL------RALSTR-------NDDP------------EKA------------SRP-FDK-- 222 (406)
T ss_pred -----------------HHhc------CCcCCC-------CCCC------------ccC------------CCC-CCC--
Confidence 0000 000000 0000 001 122 322
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|++++.+++++|.|++.... .|...+.+...+++++|+++|++++|||+++
T Consensus 223 ---~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~ 299 (406)
T cd00834 223 ---DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYIN 299 (406)
T ss_pred ---CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence 11223479999999999999999999999999999987642 2333345667899999999999999999999
Q ss_pred ecCCCHHH----HHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFASQ----FVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~~----~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+.+.. +...++ .++-.+++++++..+..+||+++|+|+.+++.++++|+++.-
T Consensus 300 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 379 (406)
T cd00834 300 AHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP 379 (406)
T ss_pred cccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence 99988742 343333 345433455655556668999999999999999999997620
Q ss_pred ------CCcEEEEEeecccceeEEEEE
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~ 436 (462)
..++++++..+.||.+.++||
T Consensus 380 ~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 380 NEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCccccccEEEEeeecCCceeeEEEC
Confidence 136778877677777777764
No 74
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.92 E-value=2e-23 Score=222.23 Aligned_cols=269 Identities=19% Similarity=0.296 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHcCCCcc---ccC----cEEEEeccCCCC------------------------ccccHHHHHHHHcCC
Q 012506 77 DLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGS------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~---~Id----~vivG~~~~~~~------------------------~~~~~a~~~a~~~Gl 125 (462)
.++..++++||+++|++++ .++ +|++|+..+... .....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 4677899999999999764 232 588887643210 001134567888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
.+|.++++++|+|+++||..|+++|++|++|++||+|+|.... ++.+
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~------------------------p~~~------- 327 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII------------------------PIGL------- 327 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC------------------------HHHH-------
Confidence 6899999999999999999999999999999999999997432 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
..|.. .++.. ++ ..+| ++ ..+| ||. +
T Consensus 328 ---------~~f~~---~~aLS-~~--------------~~~p------------~~------------~~rP-FD~~rd 355 (540)
T PLN02787 328 ---------GGFVA---CRALS-QR--------------NDDP------------TK------------ASRP-WDMNRD 355 (540)
T ss_pred ---------HHHHH---HHHhh-cc--------------CCCc------------cc------------ccCC-cccCCC
Confidence 00000 00000 00 0011 11 1344 654 4
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
|++ ++||++++||++.+.|+++|.+|+++|.|++.... .|+..+.+...+++++|+++||+++||||+
T Consensus 356 Gfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyI 428 (540)
T PLN02787 356 GFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI 428 (540)
T ss_pred Ccc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 555 89999999999999999999999999999988652 344445566789999999999999999999
Q ss_pred EecCCCHH----HHHHHHH-HcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----------------
Q 012506 359 EINEAFAS----QFVYCRN-KLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----------------- 415 (462)
Q Consensus 359 eihdafa~----~~~~~~e-~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----------------- 415 (462)
+.|.+.+. .|...++ .+|-.+ -+|+...+. +||++||+|+.+++.++..|+...-
T Consensus 429 naHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~--iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~ 506 (540)
T PLN02787 429 NAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSM--IGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKV 506 (540)
T ss_pred EccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCC--cCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccc
Confidence 99988774 3554444 456332 245544444 9999999999999999999986420
Q ss_pred ---------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ---------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ---------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.+++|......||.+.++||+..
T Consensus 507 ~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 507 LVGPKKERLDIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred ccccccccCCcCEEEEeeecCCceeEEEEEEeC
Confidence 136778887778888889998763
No 75
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.92 E-value=4e-24 Score=212.54 Aligned_cols=264 Identities=22% Similarity=0.242 Sum_probs=192.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++-.|. .||.+..+ +=+-.+.+..+|+.+|+++||+++|++++|||.||+.+.+++.. .|..+..++..+|+. ++
T Consensus 30 sdewI~--~rtGir~R-~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~~ 104 (323)
T COG0332 30 SDEWIE--TRTGIRER-RIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-GA 104 (323)
T ss_pred Ccceee--eecCCcee-eecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-Cc
Confidence 445555 45666542 22335889999999999999999999999999999999999987 788999999999994 69
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
++++++.+|+++++||..|..+|++|.++.+||+|.|.+|+...
T Consensus 105 ~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld------------------------------------ 148 (323)
T COG0332 105 PAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD------------------------------------ 148 (323)
T ss_pred ceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCC------------------------------------
Confidence 99999999999999999999999999999999999999987210
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccC
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~ 289 (462)
+.. +.
T Consensus 149 --------------------------------------~~d-------------------------------------R~ 153 (323)
T COG0332 149 --------------------------------------WTD-------------------------------------RD 153 (323)
T ss_pred --------------------------------------Hhh-------------------------------------cc
Confidence 000 00
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----------cCC---C----CCC---------ccHHHHHH
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----------VDP---A----IMG---------VGPAVAIP 342 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----------~~p---~----~~~---------~~~~~Ai~ 342 (462)
.|-..+|||+||||...+ .+.+.-- ..+.+-+..+ ..+ . .|. .....+++
T Consensus 154 t~vlFgDGAgAvvl~~~~--~~~~i~~-~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~ 230 (323)
T COG0332 154 TCVLFGDGAGAVVLEATE--DDNGILD-TDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIE 230 (323)
T ss_pred ceEEEcCCceEEEEecCC--CCcCeee-eeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHH
Confidence 111258999999998876 2222100 0111111000 000 0 011 01246888
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
++|+++||+++|||+|-+|+++..+.....++||++++++..+-- -+||+..||-...+.+++++-+=+.+ .+.|+
T Consensus 231 ~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~--~yGNtsaAsiplaL~~~~~~g~ik~G--d~ill 306 (323)
T COG0332 231 EVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVD--KYGNTSAASIPLALDEALREGRIKPG--DLVLL 306 (323)
T ss_pred HHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHH--HhcccccchHHHHHHHHhhhCCCCCC--CEEEE
Confidence 999999999999999999999999999999999999988777532 37787777766666666655554445 56666
Q ss_pred EeecccceeEEEEEE
Q 012506 423 SMCIGTGMGAAAVFE 437 (462)
Q Consensus 423 ~~~~G~G~g~A~v~~ 437 (462)
.. .|+|+....++.
T Consensus 307 ~~-fG~Gltwg~~~~ 320 (323)
T COG0332 307 EA-FGGGLTWGAALV 320 (323)
T ss_pred Ee-ecCcceeeeEEE
Confidence 54 677766655444
No 76
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.92 E-value=1.2e-23 Score=218.90 Aligned_cols=274 Identities=20% Similarity=0.193 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC--cEEEEeccCC-------------CC-----------ccccHHHHHHHHcCCCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAP-------------GS-----------QRASECRMAAFYAGFPET 128 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id--~vivG~~~~~-------------~~-----------~~~~~a~~~a~~~Glp~~ 128 (462)
...|+..++++||+++|+++.+.+ ++++|+.... .. .....+..++..+|+ +
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 567999999999999999643333 3555543211 00 001245667889999 5
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|.+++.++|+|++.||..|+++|++|++|++||+|+|.... + . ...++.. .+
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~---------~-----------~~~~~~~------~~ 210 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-Y---------W-----------ECQALRS------LG 210 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-H---------H-----------HHHHHHH------cc
Confidence 799999999999999999999999999999999999975321 0 0 0000000 00
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+.. ...| ..+|.. ..+| |+. .
T Consensus 211 ----------------~l~---~~~~----------~~~p~~------------------------~~rP-fd~-----~ 231 (410)
T PRK07103 211 ----------------AMG---SDRF----------ADEPEA------------------------ACRP-FDQ-----D 231 (410)
T ss_pred ----------------ccc---cCcc----------CCCccc------------------------CcCC-CCC-----C
Confidence 000 0000 002221 1234 543 1
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC---CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP---AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p---~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+...++||++++||++++.|+++|.+++++|.|++.....- .....+...+++++|+++||+++|||+++.|.+++
T Consensus 232 ~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 232 RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 334458999999999999999999999999999999864311 11223446799999999999999999999999999
Q ss_pred H----HHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC------------------------CCC
Q 012506 366 S----QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------------RDC 417 (462)
Q Consensus 366 ~----~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------------~~~ 417 (462)
. .+...+...+..+.+|+..++. +||+.+|+|+.+++.++++|++.. .+.
T Consensus 312 ~~~D~~E~~al~~~~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~ 389 (410)
T PRK07103 312 PLGDETELAALFASGLAHAWINATKSL--TGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARI 389 (410)
T ss_pred CCCCHHHHHHHhcCCCCCCeEECCCcc--cccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCC
Confidence 6 3444443334344567777777 699999999999999999999752 013
Q ss_pred cEEEEEeecccceeEEEEEEe
Q 012506 418 RFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.++..+..||...++||++
T Consensus 390 ~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 390 RYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CEEEEecccCCCceEEEEEeC
Confidence 788888877788888888864
No 77
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.91 E-value=7.6e-23 Score=213.06 Aligned_cols=270 Identities=22% Similarity=0.257 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC--cEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCCCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPET 128 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id--~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Glp~~ 128 (462)
..|+..++++||+++|++..+-+ ++++|+..+... .+ ...+..++..+|+ .
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~--~ 161 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA--K 161 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--C
Confidence 45778899999999997432212 466776543221 00 1135567778888 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|.+++.++|+|++.||..|++.|++|++|++||+|+|....... ..+. .+.|
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~---------------------~~~f------~~~~ 214 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVP---------------------IAGF------AQMR 214 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHH---------------------HHHH------HhcC
Confidence 899999999999999999999999999999999999998643100 0000 0000
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTT 286 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~ 286 (462)
.. +. .....| ++. .+| ||. +|++
T Consensus 215 ~~-----------------------ls-------~~~~~~------------~~~------------~rP-Fd~~~~G~v 239 (418)
T PRK07910 215 IV-----------------------MS-------TNNDDP------------AGA------------CRP-FDKDRDGFV 239 (418)
T ss_pred Cc-----------------------cc-------cCCCCC------------CCC------------cCC-CcCCCCCEe
Confidence 00 00 000001 112 234 654 4554
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
++||++++||++++.|+++|.+++++|.|++... ..|+..+.+...+++++|+++||+++|||++|.|
T Consensus 240 -------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 240 -------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred -------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 8999999999999999999999999999999875 3444455566789999999999999999999999
Q ss_pred CCCHH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
.+.+. .|...+ +.+|-...+++.. +..+||+.||+|+.+++..+..|+...
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~~~~v~s~--K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~ 390 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGHRPAVYAP--KSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGE 390 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCCCCceeCc--cccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCC
Confidence 99884 354444 4466433344433 445999999999999999999998742
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
...+++++.....||.+.++||.+
T Consensus 391 ~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 391 PRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CcCCCccEEEEeeecCCCeeEEEEEec
Confidence 023678888888888889999875
No 78
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.91 E-value=5.5e-23 Score=211.40 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHcCCCccc-cCcEEEEeccCCCC-----------c-----------------cccHHHHHHHHcCCCC
Q 012506 77 DLLAPVLKAVIEKTNVDPSE-VGDIVVGTVLAPGS-----------Q-----------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~-Id~vivG~~~~~~~-----------~-----------------~~~~a~~~a~~~Glp~ 127 (462)
.+...++++||+|+|++++. -=++++|+..+... . ....+..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 36678899999999997522 12577777533210 0 01245678888999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|.+++.++|+|+++||..|++.|++|++|++||+|+|.... + +.
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~-----------------------~~---------- 181 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-P-----------------------LT---------- 181 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-H-----------------------HH----------
Confidence 6899999999999999999999999999999999999997322 0 00
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGT 285 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~ 285 (462)
...+... +. +++ + ..+| |+. +|+
T Consensus 182 -----------~~~~~~~------~~------------------------ls~-~------------~~rP-fd~~r~G~ 206 (381)
T PRK05952 182 -----------LAGFQQM------GA------------------------LAK-T------------GAYP-FDRQREGL 206 (381)
T ss_pred -----------HHHHHhc------CC------------------------cCC-C------------CCCC-CCCCCCCc
Confidence 0000000 00 000 1 1234 543 344
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+ ++||++++||++++.|++++.+++++|.|++.... .|+..+.+...+++++|+++||+++|||++|.
T Consensus 207 v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~ 279 (381)
T PRK05952 207 V-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHA 279 (381)
T ss_pred c-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEc
Confidence 3 89999999999999999999999999999998643 34444456678999999999999999999999
Q ss_pred cCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|.+.+. .+...++. +| +++++++.+..+||+++|+|+.+++.++..|+++.-
T Consensus 280 hgtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~ 356 (381)
T PRK05952 280 HGTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQ 356 (381)
T ss_pred cCCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcc
Confidence 988764 34444444 33 356777777789999999999999999999997520
Q ss_pred --CCcEEEEEeecccceeEEEEEEe
Q 012506 416 --DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 --~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
..++.++..+..||.+.++||.+
T Consensus 357 ~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 357 QSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred cCCCCEEEEeeecCCCeeEEEEEeC
Confidence 23678888878888888888864
No 79
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.90 E-value=1.2e-22 Score=211.10 Aligned_cols=271 Identities=21% Similarity=0.274 Sum_probs=191.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----cEEEEeccCCC---------------------Ccc--ccHHHHHHHHcCC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAPG---------------------SQR--ASECRMAAFYAGF 125 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~-Id----~vivG~~~~~~---------------------~~~--~~~a~~~a~~~Gl 125 (462)
....|+.+++++||+++|+++++ ++ ++++|+..+.. ... ...+..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45788999999999999998877 65 46666543211 001 3456678889999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
.++|.++++++|+|+++||..|+++|++|++|++||+|+|.++ +..+ .+
T Consensus 151 -~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~--------------------~~-------- 199 (407)
T cd00828 151 -SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGL--------------------SG-------- 199 (407)
T ss_pred -CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHH--------------------HH--------
Confidence 3589999999999999999999999999999999999999976 2100 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+.+ .+.+..+ ..+|. . ..+| |+.
T Consensus 200 ----------------f~~------~~~ls~~-------~~~~~------------~------------~~~p-fd~--- 222 (407)
T cd00828 200 ----------------FAN------MGALSTA-------EEEPE------------E------------MSRP-FDE--- 222 (407)
T ss_pred ----------------HHH------cCCCCCC-------CCCCC------------c------------ccCC-CcC---
Confidence 000 0000000 00000 0 1233 322
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++|++++|||+++.|
T Consensus 223 --~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~h 300 (407)
T cd00828 223 --TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAH 300 (407)
T ss_pred --CCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecc
Confidence 224445899999999999999999999999999999876543322 23456789999999999999999999999
Q ss_pred CCCHH----HHHHHHHH-cCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 362 EAFAS----QFVYCRNK-LGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 362 dafa~----~~~~~~e~-LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
++++. .+...++. ++-. +.+|+.. +..+||+.+|+|+.+++.++..|+++.-
T Consensus 301 gtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~--K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 378 (407)
T cd00828 301 GTSTPANDVAESRAIAEVAGALGAPLPVTAQ--KALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVV 378 (407)
T ss_pred cccCccccHHHHHHHHHHHhccCCCceeecc--cchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccccc
Confidence 99884 44544443 4432 2344444 3349999999999999999999997520
Q ss_pred ------C--CcEEEEEeecccceeEEEEE
Q 012506 416 ------D--CRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ------~--~~~gl~~~~~G~G~g~A~v~ 436 (462)
. .+++++.....||.+.++||
T Consensus 379 ~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 379 GLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CcCccCCCCccEEEEecccCCCcceEEEC
Confidence 0 15677776666666666653
No 80
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.90 E-value=1.5e-21 Score=203.95 Aligned_cols=232 Identities=22% Similarity=0.211 Sum_probs=166.8
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|+ +.|+++++.+|+|+++||..|+++|++|++|++||+|+|....
T Consensus 154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~------------------------ 207 (425)
T PRK06501 154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS------------------------ 207 (425)
T ss_pred HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC------------------------
Confidence 56678889999 5899999999999999999999999999999999999996321
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.+.+..|... .+.. .+. ++ +++
T Consensus 208 ----------------~~~~~~~~~~---~~ls-----~~~-----------~~-----------~~~------------ 229 (425)
T PRK06501 208 ----------------AEALIRFSLL---SALS-----TQN-----------DP-----------PEK------------ 229 (425)
T ss_pred ----------------HHHHHHHHHh---hccc-----cCC-----------CC-----------CCc------------
Confidence 0000001000 0000 000 00 011
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~ 347 (462)
..+| |+. +|. .++||++++||++.+.|+++|.++++.+.+++..... +...+.+...+++++|++
T Consensus 230 ~~rp-fd~~r~G~-------v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~ 301 (425)
T PRK06501 230 ASKP-FSKDRDGF-------VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD 301 (425)
T ss_pred ccCC-CCCCCCCe-------eeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 1244 543 333 3799999999999999999999999999999876432 222223456899999999
Q ss_pred cCCCCCCccEEEecCCCHHH----HHHHH-HHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----
Q 012506 348 AGLQLDDIDLFEINEAFASQ----FVYCR-NKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----- 415 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~----~~~~~-e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----- 415 (462)
+|++++|||+++.|++++.. +...+ +.+|-. .-||+..+|. +||+++|+|+.+++..+..|++..-
T Consensus 302 agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~--~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n 379 (425)
T PRK06501 302 AGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSM--IGHTLTAAGAVEAVFSLLTIQTGRLPPTIN 379 (425)
T ss_pred cCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcc--cCCCchhhhHHHHHHHHHHHhcCcCCCcCC
Confidence 99999999999999998753 33333 334422 2367777777 5999999999999999999998520
Q ss_pred --------------------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 --------------------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 --------------------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++.+......||.+.++||+++.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 380 YDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1256677777777888899998764
No 81
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=1.3e-21 Score=203.17 Aligned_cols=266 Identities=19% Similarity=0.247 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----cEEEEeccCCCC-----------cc-------------c-cHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-----------QR-------------A-SECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~-~~Id----~vivG~~~~~~~-----------~~-------------~-~~a~~~a~~~G 124 (462)
...|+..++++||+++|++. ..++ ++++|+..+... .+ + ..+..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 35688889999999999843 2222 577776543210 00 1 14567888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ ++|.+++.++|+|+++||..|+++|++|++|++||+|+|.++... ..+
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~----------------------~~~------- 201 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTE----------------------AAV------- 201 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHH----------------------HHH-------
Confidence 9 689999999999999999999999999999999999999854310 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-- 282 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-- 282 (462)
++.+-..+..+ .+| +. ..+| |+.
T Consensus 202 ---------f~~l~~~~~~~---------------------~~~------------~~------------~~rP-fd~~~ 226 (405)
T PRK09116 202 ---------FDTLFATSTRN---------------------DAP------------EL------------TPRP-FDANR 226 (405)
T ss_pred ---------HHHhhhhccCC---------------------CCC------------CC------------CCCC-CcCCC
Confidence 00000000000 011 11 1234 543
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
+|++ ++||++++||++++.|+++|.+++++|.|++........ ...+...+++++|+++|++++|||+++
T Consensus 227 ~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~ 299 (405)
T PRK09116 227 DGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVN 299 (405)
T ss_pred CCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEE
Confidence 4544 799999999999999999999999999999987532221 123446899999999999999999999
Q ss_pred ecCCCHH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~----~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+.+. .+...+ +.+|- ..||+... -.+||++||+|+.+++..+..|+++.-
T Consensus 300 ~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv~s~K--~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v 376 (405)
T PRK09116 300 AHGTATDRGDIAESQATAAVFGA-RMPISSLK--SYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYI 376 (405)
T ss_pred CcCccCCCCCHHHHHHHHHHhCC-CCeeECcc--hhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCcc
Confidence 9998873 344444 44552 23454443 349999999999999999999987520
Q ss_pred -------CCcEEEEEeecccceeEEEEE
Q 012506 416 -------DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 -------~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+.++.|...+..||.+.++||
T Consensus 377 ~~~~~~~~~~~~l~nsfGfGG~n~~lvl 404 (405)
T PRK09116 377 MGEAREIDTEYVMSNNFAFGGINTSLIF 404 (405)
T ss_pred CCCCccCCCCEEEEeeecCCcccEEEEE
Confidence 125677777777778888876
No 82
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.89 E-value=1.1e-21 Score=203.48 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|++++.++ ++++|+..+... .+ ...+..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467888999999999999877654 477776543220 00 1135678888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
++|.+++.++|+|++.||..|+++|++|+ |++||+|+|..... +.+.
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p------------------------~~~~------ 197 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCP------------------------WGWV------ 197 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCH------------------------HHHH------
Confidence 68999999999999999999999999999 99999999985430 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
.+.. .+.+.. ..+| ++ ..+| ||. +
T Consensus 198 ---------------~~~~------~~~ls~--------~~~p------------~~------------~~rP-Fd~~~~ 223 (399)
T cd00832 198 ---------------AQLS------SGRLST--------SDDP------------AR------------AYLP-FDAAAA 223 (399)
T ss_pred ---------------HHHh------ccccCC--------CCCC------------CC------------CcCC-CcCCCC
Confidence 0000 001100 0011 11 2344 544 4
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC--CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI--MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~--~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
|++ ++||++++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++|++++||||++.|
T Consensus 224 G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~h 296 (399)
T cd00832 224 GYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFAD 296 (399)
T ss_pred CEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence 544 899999999999999999999999999999986532211 23455789999999999999999999999
Q ss_pred CCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---------------------
Q 012506 362 EAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--------------------- 415 (462)
Q Consensus 362 dafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--------------------- 415 (462)
.+.+. .+...++ .+|-...||+...+ .+||+++|+|+.+++.++..|+++.-
T Consensus 297 gtgt~~~D~~E~~al~~~fg~~~~pv~s~K~--~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~ 374 (399)
T cd00832 297 AAGVPELDRAEAAALAAVFGPRGVPVTAPKT--MTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGR 374 (399)
T ss_pred cCcCCCCCHHHHHHHHHHhCCCCCceeCCCc--hhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCc
Confidence 87764 4544444 45644345554444 48999999999999999999997520
Q ss_pred ----CCcEEEEEeecccceeEEEEE
Q 012506 416 ----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
..++.++.....||.+.++||
T Consensus 375 ~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 375 PRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred ccCCCCCEEEEeccCCCCcceEEEC
Confidence 136777777666667777664
No 83
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=1.2e-21 Score=203.74 Aligned_cols=268 Identities=20% Similarity=0.261 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|+++++++. +++|+..+... .....+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4788999999999999999888874 44444321100 001356678889999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|.+++.++|+|+++||..|+++|++|++|++|++|+|..... . .+.
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~-~---------------------~~~-------- 199 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICP-V---------------------GIG-------- 199 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCH-H---------------------HHH--------
Confidence 58999999999999999999999999999999999999985320 0 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
.+.+. +.+.. ...+| +. ..+| ||. +
T Consensus 200 ---------------~f~~~------~~ls~-------~~~~p------------~~------------~~rp-fd~~~~ 226 (406)
T PRK08439 200 ---------------GFAAM------KALST-------RNDDP------------KK------------ASRP-FDKDRD 226 (406)
T ss_pred ---------------HHHHh------Ccccc-------CCCCC------------cc------------CcCC-ccCCCC
Confidence 00000 00000 00011 11 1234 543 3
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC---ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~---~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
|.+ ++||++++||++.+.|+++|.+++++|.|++..+....... .+...+++++|+++|+ +||||++.
T Consensus 227 G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~ 297 (406)
T PRK08439 227 GFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINA 297 (406)
T ss_pred cEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEc
Confidence 443 79999999999999999999999999999987653211111 3456899999999998 89999999
Q ss_pred cCCCHH----HHHHHHH-HcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------
Q 012506 361 NEAFAS----QFVYCRN-KLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------- 414 (462)
Q Consensus 361 hdafa~----~~~~~~e-~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------- 414 (462)
|.+.+. .+...++ .+|-.. .+++...+ .+||+++|+|+.+++-.+..|+++.
T Consensus 298 hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~--~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 375 (406)
T PRK08439 298 HGTSTPYNDKNETAALKELFGSKEKVPPVSSTKG--QIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYI 375 (406)
T ss_pred cCCcCCCCCHHHHHHHHHHhcccCCCCeEECccc--ccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccC
Confidence 988764 4554444 445332 23444333 3999999999999999999999762
Q ss_pred ------CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
...++.|+.....||.+.++||.+
T Consensus 376 ~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 376 PNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 023677888877888889998875
No 84
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=4.6e-21 Score=197.99 Aligned_cols=234 Identities=15% Similarity=0.062 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc-------------------------------------cc
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------------------RA 113 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~-------------------------------------~~ 113 (462)
...|+..++++||+|+|++....+ ++++|+..+.... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 456888899999999999654332 4677775443100 01
Q ss_pred cHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccc
Q 012506 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCL 193 (462)
Q Consensus 114 ~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~ 193 (462)
..+..++..+|+ ++|.+++.++|+|++.||..|+++|++|++|++||+|+|..... .
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~-~-------------------- 209 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERP-D-------------------- 209 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH-H--------------------
Confidence 245678889999 68999999999999999999999999999999999999985330 0
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+.. +.. . +.+. . .
T Consensus 210 ---~~~~---------------------~~~-~-----~~ls------------------------~-~----------- 223 (398)
T PRK06519 210 ---MLLL---------------------YEL-G-----GLLL------------------------K-G----------- 223 (398)
T ss_pred ---HHHH---------------------HHH-c-----CccC------------------------C-C-----------
Confidence 0000 000 0 0000 0 0
Q ss_pred hcCCCccc-----CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHc
Q 012506 274 AKLKPVFK-----KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348 (462)
Q Consensus 274 ~~~~p~f~-----p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~A 348 (462)
..+|.|+ .+|++ ++|||+++||++++.|+++|.+++++|.|++.... +. ...+...+|+++|++|
T Consensus 224 -~~~p~~d~~~~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~A 293 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKPA 293 (398)
T ss_pred -CCCchhccCccCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHHC
Confidence 0012222 24544 79999999999999999999999999999965432 22 2235678999999999
Q ss_pred CCCCCCccEEEecCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 349 GLQLDDIDLFEINEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 349 Gl~~~DID~~eihdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
|+ ++||||++.|.+.+. .|...+++ ++ .||+...+. +||.+||+|+.+++..+..|++.
T Consensus 294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~Ks~--~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA---GPVRGIGTL--FGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC---CCccccchh--hccchHHHHHHHHHHHHHHHhcC
Confidence 99 899999999988764 45555554 45 357766655 89999999999999999999986
No 85
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.88 E-value=4.6e-21 Score=199.76 Aligned_cols=246 Identities=22% Similarity=0.278 Sum_probs=174.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcce
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~ 131 (462)
...+|+.+|+++||+|+|++++++|. +++|+..++.. .....+..++..+|+ +.|.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCc
Confidence 34789999999999999999988875 67766533210 012356678889999 5799
Q ss_pred EEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCH
Q 012506 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 211 (462)
Q Consensus 132 ~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisr 211 (462)
++++.+|+|++.||..|+++|++|.+|++||+|+|.++.... +.. ....
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~----------------------~~~-----~~~~---- 212 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM----------------------FVG-----FSKA---- 212 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHH----------------------HHH-----HhhC----
Confidence 999999999999999999999999999999999998643100 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCC
Q 012506 212 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 291 (462)
Q Consensus 212 e~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~ 291 (462)
+.+. | +. ..+| |+. ..+.
T Consensus 213 --------------------~~l~------------~------------~~------------~~~p-f~~-----~~~g 230 (421)
T cd00833 213 --------------------GMLS------------P------------DG------------RCRP-FDA-----DADG 230 (421)
T ss_pred --------------------CCCC------------C------------CC------------CCCC-CCC-----CCCC
Confidence 0000 0 00 0122 221 1122
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC--C---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--A---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p--~---~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~ 366 (462)
..++|||+++||++++.|++++.+++++|.|++...... . ....+...+++++|+++|++++|||+++.|...+.
T Consensus 231 ~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 231 YVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred eeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 337999999999999999999999999999998764321 1 11334568999999999999999999999999875
Q ss_pred H----HHHHHH-HcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC
Q 012506 367 Q----FVYCRN-KLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414 (462)
Q Consensus 367 ~----~~~~~e-~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~ 414 (462)
. +...++ .++-. ..++..+.-+..+||+++|+|+.+++.++.+|+.+.
T Consensus 311 ~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ 366 (421)
T cd00833 311 LGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGV 366 (421)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCC
Confidence 3 333333 23322 123333333444999999999999999999999764
No 86
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.88 E-value=4.4e-21 Score=195.44 Aligned_cols=265 Identities=20% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCccccCcEEEEec-----cCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTV-----LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 145 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~ag-l~~~~Id~vivG~~-----~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai 145 (462)
+.+..+|+..|++++|++++ +++++||.+++... .++.. .+.....++..+|++.+.+.++++.+|+|+++||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDL-EERLLRELEARLGLRLEPGSAVIARGRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcch-HHHHHHHHHHHhCCCCCCCcccccccchHHHHHH
Confidence 34778999999999999999 78999998776432 11110 1234567788899965678899999999999999
Q ss_pred HHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 012506 146 ADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKA 225 (462)
Q Consensus 146 ~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A 225 (462)
..|+++|++|++|.+||+|+|.++.... + + .+...
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~----------------------~------------------~-----~~~~~ 175 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPT----------------------L------------------A-----HYEAR 175 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHH----------------------H------------------H-----HHHHh
Confidence 9999999999999999999999865100 0 0 00000
Q ss_pred HHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeC
Q 012506 226 AAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 305 (462)
Q Consensus 226 ~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s 305 (462)
. .+ .+.+ +.+|++ ++|||+++||++
T Consensus 176 ~------~l-----------------------~~~~-------------------~~~G~v-------~GEGA~a~vLe~ 200 (348)
T PRK06147 176 D------RL-----------------------LTSQ-------------------NSNGFI-------PGEAAAAVLLGR 200 (348)
T ss_pred h------cc-----------------------CCCC-------------------CCCcee-------eeceEEEEEEcc
Confidence 0 00 0000 013333 799999999999
Q ss_pred HHHHHhcCCCceEEEEEEEEeccC------CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHH-HHH
Q 012506 306 RSVAMRKGLPILGVFRTFAAVGVD------PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYC-RNK 374 (462)
Q Consensus 306 ~e~A~~~g~~~~~~i~g~~~~~~~------p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~-~e~ 374 (462)
.+.|++++.++++ .+++..... +...+.+...+++++|+++|++++|||+++.|-..+.. +... .+.
T Consensus 201 ~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~ 278 (348)
T PRK06147 201 PAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRL 278 (348)
T ss_pred HhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHH
Confidence 9999999999987 455443221 11134566789999999999999999999999875543 2332 334
Q ss_pred cCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEeccc
Q 012506 375 LGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDC 441 (462)
Q Consensus 375 LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~ 441 (462)
+|-.. .+++.. +..+||.++|+|+.+++.++.+|++.-....+.|+..+.-.|.=.|++|+..+.
T Consensus 279 f~~~~~~~~~~~~--k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~~~ 345 (348)
T PRK06147 279 FRVRKEFFDLWHP--AECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYRRG 345 (348)
T ss_pred hhhccCCCceecc--hHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEecccc
Confidence 55432 345544 444999999999999999999999874322556665555555556788886543
No 87
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.88 E-value=2.1e-21 Score=196.23 Aligned_cols=255 Identities=19% Similarity=0.220 Sum_probs=178.2
Q ss_pred eecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCC
Q 012506 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~ 137 (462)
.+|++.+ ++...++.+..+|+.+|+++||+++|+++++||.+++++..++.. ...+..++..+|+. +.++++++.+
T Consensus 35 ~~~gi~~-r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~~~v~~~ 110 (326)
T CHL00203 35 TRTGIKK-RHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVAFDITAA 110 (326)
T ss_pred eccCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCceeeeccc
Confidence 6788876 456778899999999999999999999999999999998766543 23355778889995 6889999999
Q ss_pred CchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHH
Q 012506 138 CSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQA 217 (462)
Q Consensus 138 CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~ 217 (462)
|+|++.++..|.++|++|.++++|++|+|.||....
T Consensus 111 Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~-------------------------------------------- 146 (326)
T CHL00203 111 CSGFILALVTATQFIQNGSYKNILVVGADTLSKWID-------------------------------------------- 146 (326)
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCC--------------------------------------------
Confidence 999999999999999999999999999999876210
Q ss_pred HHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCc
Q 012506 218 AVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 297 (462)
Q Consensus 218 a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDG 297 (462)
|. + + .+....+||
T Consensus 147 ------------------------------~~------------~--~-----------------------~~~~~fgDg 159 (326)
T CHL00203 147 ------------------------------WS------------D--R-----------------------KTCILFGDG 159 (326)
T ss_pred ------------------------------cc------------c--C-----------------------CceEEEcce
Confidence 00 0 0 001125899
Q ss_pred ceEEEEeCHHHHHhcCCCceEE-EEE-------EEEe---------c--cCCC-CC-----------Cc---cHHHHHHH
Q 012506 298 AGAVLLMKRSVAMRKGLPILGV-FRT-------FAAV---------G--VDPA-IM-----------GV---GPAVAIPA 343 (462)
Q Consensus 298 AaAvvL~s~e~A~~~g~~~~~~-i~g-------~~~~---------~--~~p~-~~-----------~~---~~~~Ai~~ 343 (462)
|+|+||.+.+.. + ++.. +.. +... + ..|. .+ .. ....++++
T Consensus 160 a~A~ll~~~~~~---~--~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 160 AGAAIIGASYEN---S--ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred eeEEEEEEcCCC---C--eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 999999864321 1 1110 000 0000 0 0000 00 00 01246888
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+|+++|++++|||+|-+|+.+..+...+.+.||++++++..+ .--+||...++-...+.+++++-+-+.+ ++.+..
T Consensus 235 ~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~--l~~~Gn~~sasi~~~L~~~~~~g~~~~G--d~vll~ 310 (326)
T CHL00203 235 CLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITN--LEKYGNTSAASIPLALDEAIQNNKIQPG--QIIVLS 310 (326)
T ss_pred HHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhH--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEE
Confidence 999999999999999999999999999999999998887543 3458888777765555555432111223 455554
Q ss_pred eecccceeEEEEEE
Q 012506 424 MCIGTGMGAAAVFE 437 (462)
Q Consensus 424 ~~~G~G~g~A~v~~ 437 (462)
. .|.|+.+..++.
T Consensus 311 ~-~G~G~s~~~~v~ 323 (326)
T CHL00203 311 G-FGAGLTWGAIVL 323 (326)
T ss_pred E-EchhhhheEEEE
Confidence 3 566666544443
No 88
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.87 E-value=1.2e-20 Score=195.78 Aligned_cols=269 Identities=16% Similarity=0.208 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------cc--------------ccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------QR--------------ASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------~~--------------~~~a~~~a~~~G 124 (462)
...++..++++||+++|++++..+ ++++|+..+... .+ ...+..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 456888999999999999765544 466666432210 00 125667888999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ ++|.++++++|+|++.||..|+++|++|++|++||+|+|..+... ..+.
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~----------------------~~~f------ 200 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEM----------------------SCLF------ 200 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHH----------------------HHHH------
Confidence 9 689999999999999999999999999999999999999753300 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-- 282 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-- 282 (462)
+. ..+.. . .++ .+| +. ..+| |+.
T Consensus 201 ----------~~------~~~ls-~---~~~----------~~p------------~~------------~~rP-Fd~~r 225 (406)
T PRK07967 201 ----------DA------MGALS-T---KYN----------DTP------------EK------------ASRA-YDANR 225 (406)
T ss_pred ----------HH------hhhhc-c---CCC----------CCC------------Cc------------CCcC-CcCCC
Confidence 00 00000 0 000 001 11 1244 543
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
+|++ ++||++++||++.+.|+++|.+++++|.|++........ .+.+...+++++|+.++ + ||||++
T Consensus 226 ~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~ 295 (406)
T PRK07967 226 DGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYIN 295 (406)
T ss_pred Ccee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEE
Confidence 4554 899999999999999999999999999999986532221 23455789999998655 4 999999
Q ss_pred ecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+-+. .|...++ .+|-...+|+...+. +||++||+|+.+++..+..|+.+.-
T Consensus 296 aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~s~K~~--~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~ 373 (406)
T PRK07967 296 THGTSTPVGDVKELGAIREVFGDKSPAISATKSL--TGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIV 373 (406)
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCCCCeeECcccc--cccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCcc
Confidence 9987774 4554444 466433356655444 8999999999999999999987520
Q ss_pred -------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 -------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 -------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++.++.....||.+.++||++.+
T Consensus 374 ~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 374 TETTDNAELTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred CCCCcCCCCCEEEEecccCCCeeEEEEEEecC
Confidence 1256788777778888999998753
No 89
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.86 E-value=2.2e-20 Score=192.58 Aligned_cols=273 Identities=21% Similarity=0.237 Sum_probs=187.4
Q ss_pred hhhcccCCCCCcEEEEEeee--------------------------cccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC
Q 012506 40 AAYHRTSVYGDDVVIVAAYR--------------------------TALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD 93 (462)
Q Consensus 40 ~~~~~~~~~~~~v~Ivg~~r--------------------------Tp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~ 93 (462)
-.|+++.-.+..+.|+|.+. |++.+ ++...++.++.+|+.+|+++||+++|++
T Consensus 36 ~~~~~~~~~~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~-R~~~~~~~~~~~La~~Aa~~aL~~agi~ 114 (379)
T PLN02326 36 SKYRRPRRVGSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRN-RRVLSGDETLTSLAVEAAKKALEMAGVD 114 (379)
T ss_pred ccccCcccccCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcce-EeecCCCCCHHHHHHHHHHHHHHHcCCC
Confidence 34677776666777777763 33333 2333467899999999999999999999
Q ss_pred ccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC
Q 012506 94 PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM 173 (462)
Q Consensus 94 ~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~ 173 (462)
+++||.+++++..++.. ...+..++..+|++ +.++++++.+|+|+++||..|.+.|++|.++.+|++|.|.+|....
T Consensus 115 ~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~~ 191 (379)
T PLN02326 115 PEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYVD 191 (379)
T ss_pred HHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCCC
Confidence 99999999998765543 23566788999996 7899999999999999999999999999999999999999875110
Q ss_pred CCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCC
Q 012506 174 AWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDE 253 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~ 253 (462)
+.
T Consensus 192 --------------------------------------------------------------------------~~---- 193 (379)
T PLN02326 192 --------------------------------------------------------------------------WT---- 193 (379)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred CceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceE-EEEEEE-----E--
Q 012506 254 KPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILG-VFRTFA-----A-- 325 (462)
Q Consensus 254 ~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~-~i~g~~-----~-- 325 (462)
| ..++...+|||+|+||.+.+... .+ ++. .+...+ .
T Consensus 194 -------d--------------------------~~~~~lfGDGAaAvlL~~~~~~~-~~--i~~~~~~t~g~~~~~~~~ 237 (379)
T PLN02326 194 -------D--------------------------RGTCILFGDGAGAVVLQACDDDE-DG--LLGFDMHSDGNGHKHLHA 237 (379)
T ss_pred -------c--------------------------cCceEEEcceeEEEEEEEcCCCC-Cc--eEEEEEEEcCCCCCeEEe
Confidence 0 00011258999999998754221 11 111 111100 0
Q ss_pred --ecc--------------CC----CC--CC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH
Q 012506 326 --VGV--------------DP----AI--MG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372 (462)
Q Consensus 326 --~~~--------------~p----~~--~~-~~----------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~ 372 (462)
.+. .+ .. +. .+ ...+++++|+++|++++|||+|-+|+.+..+...+.
T Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~ 317 (379)
T PLN02326 238 TFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVA 317 (379)
T ss_pred cCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHH
Confidence 000 00 00 00 01 124678899999999999999999999999988899
Q ss_pred HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 373 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 373 e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.|... .|.|+.+..+
T Consensus 318 ~~Lgl~~ek~~~~--l~~~GNt~sAsi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~ 375 (379)
T PLN02326 318 QRLGIPPEKVISN--LANYGNTSAASIPLALDEAVRSGKVKKG--DVIATAG-FGAGLTWGSA 375 (379)
T ss_pred HHcCCCHHHeeec--HhhcCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EChhheeeEE
Confidence 9999999887544 3458888777755555555432111223 5665543 5666665443
No 90
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.86 E-value=2.6e-20 Score=187.38 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=179.0
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
+|++.+ ++...++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|+ ..+++++++.+|
T Consensus 37 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~-~~~~~~~v~~~C 113 (319)
T PRK09352 37 RTGIKE-RRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGA-KNAAAFDLSAAC 113 (319)
T ss_pred hcCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCC-CCCcEeeccccc
Confidence 566654 345567899999999999999999999999999999998876543 45567789999999 578999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|++.||..|+++|++|.+|++||+|+|+++....
T Consensus 114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~--------------------------------------------- 148 (319)
T PRK09352 114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVD--------------------------------------------- 148 (319)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccC---------------------------------------------
Confidence 99999999999999999999999999999865100
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
+. + + ......+|||
T Consensus 149 -----------------------------~~------------~-------------------~------~~~~~~gDGa 162 (319)
T PRK09352 149 -----------------------------WT------------D-------------------R------STCVLFGDGA 162 (319)
T ss_pred -----------------------------cc------------c-------------------C------CceEEEeccc
Confidence 00 0 0 0011258999
Q ss_pred eEEEEeCHHHHHhcCCCceE-EEEEEEEec---cCCCC-------------CCc--------cHHHHHHHHHHHcCCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILG-VFRTFAAVG---VDPAI-------------MGV--------GPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~-~i~g~~~~~---~~p~~-------------~~~--------~~~~Ai~~aL~~AGl~~~ 353 (462)
+|+||.+.... + .+. ++...+... ..|.. .+. ....+++++|+++|++++
T Consensus 163 aA~ll~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~ 237 (319)
T PRK09352 163 GAVVLGASEEP---G--ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPE 237 (319)
T ss_pred eEEEEEEcCCC---C--eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999986532 1 111 111111000 00100 000 113478889999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
|||+|.+|..+........+.||++++++..+ .-.+||..+++-...+..++..=+-..+ ++.+... .|.|+...
T Consensus 238 di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~~~~~~g~~~~G--d~vll~s-~G~G~~~~ 312 (319)
T PRK09352 238 DIDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALDEAVRDGRIKRG--DLVLLEG-FGGGLTWG 312 (319)
T ss_pred HCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhheeE
Confidence 99999999999999899999999998877543 2348998888866666655532111223 4444432 46565553
Q ss_pred -EEE
Q 012506 434 -AVF 436 (462)
Q Consensus 434 -~v~ 436 (462)
++|
T Consensus 313 ~~ll 316 (319)
T PRK09352 313 AALV 316 (319)
T ss_pred EEEE
Confidence 444
No 91
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.85 E-value=4.7e-20 Score=187.77 Aligned_cols=247 Identities=15% Similarity=0.255 Sum_probs=175.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++...+.++++.+|+++..+|..|++
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~ 124 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG 124 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988766543 455677888999995468899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+||++.|.++..+.
T Consensus 125 ~i~sg~~~~vLVv~~d~~~~~~~--------------------------------------------------------- 147 (345)
T TIGR00748 125 LVASGMIKYGLAIGADTAQGAPG--------------------------------------------------------- 147 (345)
T ss_pred HHHcCCCCEEEEEEEeecccCCC---------------------------------------------------------
Confidence 99999999999999999753110
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ ...| ..+|||+|+||...+..
T Consensus 148 -------------------------------~--------------~~~~------------~~GDGAaA~vl~~~~~~- 169 (345)
T TIGR00748 148 -------------------------------D--------------ALEY------------TAGAGGAAYIIGEKNTV- 169 (345)
T ss_pred -------------------------------c--------------cCcc------------cCCCceEEEEEccCCcc-
Confidence 0 0000 03788888888753311
Q ss_pred hcCCCceEEEEEEEEecc----------C--CC----CCC-----ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV----------D--PA----IMG-----VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~----------~--p~----~~~-----~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
..+.+...... . |. ..+ .....+++++|+++|++++|||+|-+|+++..+..
T Consensus 170 -------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~ 242 (345)
T TIGR00748 170 -------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYL 242 (345)
T ss_pred -------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHH
Confidence 01111110000 0 10 000 01136788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEEEeccccccc
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVFERGDCADEL 445 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~~~~~~~~~~ 445 (462)
.+.+.||++++++..+=-.--+||...++-...+.+++.+++ .+ ++.+.. ..|.|..++ .+++-.+....+
T Consensus 243 ~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~~--~G--d~vll~-~~G~G~s~~~~~~~~~~~~~~~ 314 (345)
T TIGR00748 243 VAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIAE--PG--DRILAV-SYGSGAGSDAFSIVVQDAIEEK 314 (345)
T ss_pred HHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhcC--CC--CEEEEE-EecCCcceeEEEEEEchhHHHH
Confidence 899999999887654210134899988888777777765432 33 444443 356666664 455444444433
No 92
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.85 E-value=5.2e-20 Score=186.15 Aligned_cols=241 Identities=19% Similarity=0.204 Sum_probs=171.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC-CcceEEecCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~-~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++. .+++++++.+|+|+++||..|..
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~ 127 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY 127 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence 568999999999999999999999999999998766543 4667888999999964 36999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|+++.|.++...
T Consensus 128 ~l~~g~~~~~Lvv~~e~~s~~~---------------------------------------------------------- 149 (329)
T PRK07204 128 AIECGRYKRVLIISSEISSVGL---------------------------------------------------------- 149 (329)
T ss_pred HHHCCCCCEEEEEEeccccCCC----------------------------------------------------------
Confidence 9999999999999999976510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
++.. ..+....+|||+|+||.+.+..
T Consensus 150 ----------------~~~~-------------------------------------~~~~~lfGDGAaA~ll~~~~~~- 175 (329)
T PRK07204 150 ----------------NWGQ-------------------------------------NESCILFGDGAAAVVITKGDHS- 175 (329)
T ss_pred ----------------Cccc-------------------------------------CcceEEEecccEEEEEEEcCCC-
Confidence 0000 0001125899999999875431
Q ss_pred hcCCCceE-------------EEEEEEEeccCCCC------------CC-cc--------HHHHHHHHHHHcCCCCCCcc
Q 012506 311 RKGLPILG-------------VFRTFAAVGVDPAI------------MG-VG--------PAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 311 ~~g~~~~~-------------~i~g~~~~~~~p~~------------~~-~~--------~~~Ai~~aL~~AGl~~~DID 356 (462)
.+++. .+.+++.. .++.. +. .. ...+++++|+++|++++|||
T Consensus 176 ---~~il~~~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did 251 (329)
T PRK07204 176 ---SRILASHMETYSSGAHLSEIRGGGTM-IHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADID 251 (329)
T ss_pred ---CcEEEEEEEEecCCCCceEEecCCcC-CCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 11221 11111110 01100 00 00 23688899999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 434 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~ 434 (462)
+|-+|+.+..+...+.+.||++++++..+ .--+||...++-...+.+++++=+-+.+ ++.+... .|.|+.++.
T Consensus 252 ~~~~H~~~~~~~~~i~~~l~l~~e~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~~ 324 (329)
T PRK07204 252 LIVPHQASGPAMRLIRKKLGVDEERFVTI--FEDHGNMIAASIPVALFEAIKQKKVQRG--NKILLLG-TSAGLSIGG 324 (329)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Echhhhhee
Confidence 99999999999999999999998876533 3348888877765556555443111223 4555543 566666544
No 93
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.85 E-value=3.1e-20 Score=188.40 Aligned_cols=266 Identities=17% Similarity=0.153 Sum_probs=180.6
Q ss_pred EEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 55 vg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+|..+.++.. .+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++.++++++|
T Consensus 47 ~Gi~~R~~~~------~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v 119 (338)
T PRK09258 47 TGIRERRWWP------EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDV 119 (338)
T ss_pred cCceeEecCC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeeh
Confidence 4555544432 4778999999999999999999999999999999876655 57788899999999766899999
Q ss_pred cCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHH
Q 012506 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 214 (462)
Q Consensus 135 ~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~ 214 (462)
+.+|+|++.||..|.+.|++|.++.+||++.|.++..... . +.+
T Consensus 120 ~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~-------~--------------------------~~~--- 163 (338)
T PRK09258 120 SNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEA-------T--------------------------IDR--- 163 (338)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhccc-------h--------------------------hhh---
Confidence 9999999999999999999999999999999998752100 0 000
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCc
Q 012506 215 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQV 294 (462)
Q Consensus 215 ~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~ 294 (462)
+. . ++ .+.+ + | .+.......
T Consensus 164 -------------------~~-----------~-------------~~-----~~~~------~-~-----~~~~~~~~~ 183 (338)
T PRK09258 164 -------------------LL-----------A-------------PE-----TTRE------D-F-----AQSFATLTL 183 (338)
T ss_pred -------------------hc-----------c-------------Cc-----cchh------h-h-----hhccceEEe
Confidence 00 0 00 0000 0 0 000111226
Q ss_pred CCcceEEEEeCHHHHHhcCCCceEEEEEEEEec----c-----CCCCCCc-----------cHHHHHHHHHHHcCCCCCC
Q 012506 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----V-----DPAIMGV-----------GPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 295 sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~----~-----~p~~~~~-----------~~~~Ai~~aL~~AGl~~~D 354 (462)
+|||+|+||.+.+.. ..+. .+.+..... . ....+.. ....+++++|+++|++++|
T Consensus 184 GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~d 258 (338)
T PRK09258 184 GSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQ 258 (338)
T ss_pred cccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 899999999875421 1111 222222110 0 0001100 1124778899999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
||+|-+|..+..+...+.+.||++++++..+- --+||..+++-...+.+++.+=+-+.+ ++.|... .|.|....
T Consensus 259 id~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~--~~~GN~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~ 332 (338)
T PRK09258 259 VDRVICHQVGAAHTRAILKALGIDPEKVFTTF--PTLGNMGPASLPITLAMAAEEGFLKPG--DRVALLG-IGSGLNCS 332 (338)
T ss_pred CCEEecCCCCHHHHHHHHHHhCCCHHHceehH--hhhCCcHHhHHHHHHHHHHHhCCCCCC--CEEEEEE-echhHhhH
Confidence 99999999999999999999999988775542 348898888876666666543111223 5555543 45555443
No 94
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.85 E-value=8.8e-20 Score=183.49 Aligned_cols=251 Identities=20% Similarity=0.251 Sum_probs=175.9
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
++.+.+ ++...++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ..++++++.+|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C 112 (318)
T TIGR00747 36 RTGIKE-RRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAAC 112 (318)
T ss_pred ccCceE-EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhh
Confidence 355443 234457889999999999999999999999999999998876653 566778899999995 57999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|++.||..|+++|++|.++++|++|+|.++...
T Consensus 113 ~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~---------------------------------------------- 146 (318)
T TIGR00747 113 AGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL---------------------------------------------- 146 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC----------------------------------------------
Confidence 9999999999999999999999999999976410
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
++.. + .+....+|||
T Consensus 147 ----------------------------~~~~-------------------------------~------~~~~~~GDGA 161 (318)
T TIGR00747 147 ----------------------------DWTD-------------------------------R------GTCVLFGDGA 161 (318)
T ss_pred ----------------------------CcCC-------------------------------C------CeEEEEecce
Confidence 0000 0 0011258999
Q ss_pred eEEEEeCHHHHHhcCCCceE-EEEEEEEec---cCC-------CCC------C--------ccHHHHHHHHHHHcCCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILG-VFRTFAAVG---VDP-------AIM------G--------VGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~-~i~g~~~~~---~~p-------~~~------~--------~~~~~Ai~~aL~~AGl~~~ 353 (462)
+|+||.+.+... .++. .+...+... .-| ... + .....+++++|+++|++++
T Consensus 162 aA~lL~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 237 (318)
T TIGR00747 162 GAVVLGESEDPG----GIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPE 237 (318)
T ss_pred eEEEEeecCCCC----cEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999998765321 1111 111100000 000 000 0 0113467889999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
|||+|.+|..+......+.+.||++++++..+ .--+||..+++-...+.+++..=+-+.+ ++.+.-. .|.|+..
T Consensus 238 di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~vll~~-~G~G~t~ 311 (318)
T TIGR00747 238 DIDWFVPHQANLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALDELLRTGRIKPG--DLLLLVA-FGGGLTW 311 (318)
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Eehhhee
Confidence 99999999999999999999999999877644 3348888888866666665542111223 4544432 4656554
No 95
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.84 E-value=1.8e-19 Score=181.68 Aligned_cols=244 Identities=21% Similarity=0.233 Sum_probs=173.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ..++++++.+|+|++.||..|.+
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~ 126 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG 126 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence 5778999999999999999999999999999998776554 567788899999995 58999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|++++|.++....
T Consensus 127 ~l~~g~~~~~Lvv~~e~~s~~~~--------------------------------------------------------- 149 (325)
T PRK12879 127 LITSGLYKKVLVIGAERLSKVTD--------------------------------------------------------- 149 (325)
T ss_pred HHHcCCCCEEEEEEehhhcCcCC---------------------------------------------------------
Confidence 99999999999999999865100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. + +. .....+|||+|+||.+.+..
T Consensus 150 -----------------~~------------~--------------~~-----------~~~~~GDgAaA~ll~~~~~~- 174 (325)
T PRK12879 150 -----------------YT------------D--------------RT-----------TCILFGDGAGAVVLEATENE- 174 (325)
T ss_pred -----------------cc------------c--------------cC-----------ceEEEeecceEEEEEecCCC-
Confidence 00 0 00 01125899999999875531
Q ss_pred hcCCCceEEEEEE-E-------Eec----cCCC--C-------CCc--------cHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 311 RKGLPILGVFRTF-A-------AVG----VDPA--I-------MGV--------GPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~-------~~~----~~p~--~-------~~~--------~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
.+ ++....+. + ... .++. . .+. ....+++++|+++|++++|||+|-+|
T Consensus 175 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 175 -PG--FIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred -CC--eEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 11 11111000 0 000 0000 0 000 11357889999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
..+..+...+.+.||++++++..+ .--+||...++-...+.+++.+=+-+.+ ++.+... .|.|... +++|
T Consensus 252 ~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~~~~~~l~ 322 (325)
T PRK12879 252 QANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLALDLALEQGKIKPG--DTLLLYG-FGAGLTWAALLV 322 (325)
T ss_pred CCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhhEEEEE
Confidence 999999889999999998876543 3458998888876666666543111223 4444433 4666555 3444
No 96
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.84 E-value=1.5e-19 Score=186.21 Aligned_cols=97 Identities=14% Similarity=0.206 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ .+++++++.+|+|++++|..|+..
T Consensus 60 ~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~ 137 (378)
T PRK06816 60 THSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLS 137 (378)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999876543 344456778889995 579999999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.++.+||+|+|.+|.
T Consensus 138 i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 138 VKAGESRNAVATASELASR 156 (378)
T ss_pred HHCCCCCEEEEEeEccchh
Confidence 9999999999999999987
No 97
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.84 E-value=6.8e-20 Score=184.10 Aligned_cols=240 Identities=23% Similarity=0.248 Sum_probs=172.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ++++++++.+|+|++.+|..|++
T Consensus 46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 5688999999999999999999999999999998876654 466788899999996 78999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|++++|.++....
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~~~~--------------------------------------------------------- 146 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSRILD--------------------------------------------------------- 146 (320)
T ss_pred HHHcCCCCEEEEEEehhhccccC---------------------------------------------------------
Confidence 99999999999999999865100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|+ ++ ......+|||+|+||.+.+.
T Consensus 147 ---~~-----------~~----------------------------------------~~~~~~GDgAaA~ll~~~~~-- 170 (320)
T cd00830 147 ---WT-----------DR----------------------------------------STAVLFGDGAGAVVLEATEE-- 170 (320)
T ss_pred ---cc-----------cC----------------------------------------CceEEEeccceEEEEEecCC--
Confidence 00 00 00112589999999987653
Q ss_pred hcCCCceEEEEEE-EE----eccC------C--------CC--C-C--------ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 311 RKGLPILGVFRTF-AA----VGVD------P--------AI--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~~----~~~~------p--------~~--~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+..++...... .. ...+ | .. + + .....++.++|+++|++++|||+|-+
T Consensus 171 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~ 248 (320)
T cd00830 171 --DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVP 248 (320)
T ss_pred --CCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEE
Confidence 11222111100 00 0000 0 00 0 0 01246888999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
|..+......+.+.||++++++..+ .--+||..+++-...+.+++.+-+-+.+ ++.+... +|.|+..
T Consensus 249 h~~~~~~~~~~~~~lgl~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~~~ 315 (320)
T cd00830 249 HQANLRIIEAVAKRLGLPEEKVVVN--LDRYGNTSAASIPLALDEAIEEGKLKKG--DLVLLLG-FGAGLTW 315 (320)
T ss_pred CCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchHHhh
Confidence 9999999999999999998887543 2348998888876666666543221233 4555433 4555443
No 98
>PRK04262 hypothetical protein; Provisional
Probab=99.83 E-value=3.2e-19 Score=181.83 Aligned_cols=247 Identities=17% Similarity=0.240 Sum_probs=177.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++..+++++++.+|++++++|..|..
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~ 125 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998766654 456677888999996557899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|+++.|....
T Consensus 126 ~i~sg~~~~aLVv~~e~~~~------------------------------------------------------------ 145 (347)
T PRK04262 126 LVKSGMIKYALAIGADTAQG------------------------------------------------------------ 145 (347)
T ss_pred HHHcCCCCEEEEEEEeeecc------------------------------------------------------------
Confidence 99999999999999997311
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|.. +..+ + .+|||+|+||.+.+.
T Consensus 146 ----------------~~~~--------------------------~~~~-----~-------~GDGA~A~ll~~~~~-- 169 (347)
T PRK04262 146 ----------------APGD--------------------------ALEY-----T-------AAAGGAAFIIGKEEV-- 169 (347)
T ss_pred ----------------CCCC--------------------------CCCC-----c-------CCCCcEEEEEecCcc--
Confidence 0000 0000 0 378888888875331
Q ss_pred hcCCCceEEEEEEEEecc------------CCC---CCC------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV------------DPA---IMG------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~------------~p~---~~~------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
..++.++..... .|. .+. .....+++++|+++|++++|||+|-+|+.+..+..
T Consensus 170 ------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 170 ------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred ------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHH
Confidence 112222110000 010 000 12246788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEeccccccc
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFERGDCADEL 445 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~~~~~~~ 445 (462)
.+.+.||++++++..+-=.--+||..+|+-...+.+++.++ +.+ ++.|... .|.|... +.+++..+.+.++
T Consensus 244 ~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~--~~G--d~vll~~-~G~G~~~~~~~~~~~~~~~~~ 315 (347)
T PRK04262 244 RVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVA--KPG--DRILVVS-FGSGAGSDAFSITVTDAIEEK 315 (347)
T ss_pred HHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHhC--CCC--CEEEEEe-cCCCcceeeEEEEechhHHHh
Confidence 99999999988765321123489999999888887776543 233 4555543 5666665 4566655555544
No 99
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.83 E-value=5e-19 Score=214.01 Aligned_cols=228 Identities=20% Similarity=0.197 Sum_probs=169.3
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|| ++|.++|+++|+|++.||+.|++.|++|++|++|++|++..... . .
T Consensus 185 ~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p-~--------------------~ 241 (2582)
T TIGR02813 185 ISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSP-F--------------------M 241 (2582)
T ss_pred HHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCH-H--------------------H
Confidence 46778899999 68999999999999999999999999999999999999875330 0 0
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.++ +.+. + .+++|+.+
T Consensus 242 ~~~------------------------fs~~------~------------------------~lS~~g~c---------- 257 (2582)
T TIGR02813 242 YMS------------------------FSKT------P------------------------AFTTNEDI---------- 257 (2582)
T ss_pred HHH------------------------HHhc------c------------------------CcCCCCCc----------
Confidence 000 0000 0 11223323
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC--CCC---CccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--AIM---GVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p--~~~---~~~~~~Ai~~aL~~ 347 (462)
+| ||. +|++ ++||++++||.+.+.|++.|.+|++.|.|++.+...- ... ..+...+++++|++
T Consensus 258 --rp-FD~~adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~ 327 (2582)
T TIGR02813 258 --QP-FDIDSKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDD 327 (2582)
T ss_pred --cC-CCCCCCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHH
Confidence 33 654 4554 8999999999999999999999999999999875322 111 12346899999999
Q ss_pred cCCCCCCccEEEecCCCHH----HHHHHH-HHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----
Q 012506 348 AGLQLDDIDLFEINEAFAS----QFVYCR-NKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----- 414 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~----~~~~~~-e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----- 414 (462)
||++++||||+|.|.+-+. .+...+ +.||-.. .++.+..-+..+||..+|+|+..++.++..|+++.
T Consensus 328 Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~ 407 (2582)
T TIGR02813 328 AGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTI 407 (2582)
T ss_pred cCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCC
Confidence 9999999999999988774 344333 4455432 23433333445999999999999999999998752
Q ss_pred ------------------------------CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ------------------------------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ------------------------------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+..++++++.++.||.+..+||+..
T Consensus 408 ~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 408 NVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred CCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 0136788888788889999999875
No 100
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.82 E-value=4.8e-19 Score=180.77 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=171.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||+++|+++++||.||+++.+++.. .|..+..++..+|++..+++++++.+|++++++|..|..
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~ 134 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS 134 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999998776 788999999999997678999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|..+ +|+++.|..|...
T Consensus 135 ~i~~~~~~-~LVv~~e~~S~~~---------------------------------------------------------- 155 (353)
T PRK12880 135 LIQSGLGK-ILLICGDTLSKFI---------------------------------------------------------- 155 (353)
T ss_pred HHHcCCCC-EEEEEehhhhccC----------------------------------------------------------
Confidence 99999999 9999999876510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + ...++ .+|||+|+||.+.+...
T Consensus 156 ----------------~~~------------d--~---------~~~~l--------------FGDGAaA~vl~~~~~~~ 182 (353)
T PRK12880 156 ----------------HPK------------N--M---------NLAPI--------------FGDGVSATLIEKTDFNE 182 (353)
T ss_pred ----------------Ccc------------c--C---------Cceee--------------ecccceEEEEEecCCCC
Confidence 010 0 0 00122 48999999998533210
Q ss_pred hcCCCceEEEEEEEE----e----c-c-CCC---------------------CC-Ccc--------HHHHHHHHHHHcCC
Q 012506 311 RKGLPILGVFRTFAA----V----G-V-DPA---------------------IM-GVG--------PAVAIPAAVKSAGL 350 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~----~----~-~-~p~---------------------~~-~~~--------~~~Ai~~aL~~AGl 350 (462)
+ ...+...+. . + . .|. .| +.. ...+++++|+++|+
T Consensus 183 --~---~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl 257 (353)
T PRK12880 183 --A---FFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKV 257 (353)
T ss_pred --c---eEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 111111110 0 0 0 000 01 111 13578899999999
Q ss_pred CCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccce
Q 012506 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 430 (462)
Q Consensus 351 ~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~ 430 (462)
+++|||+|-+|+....+...+.++||++++++... -.--+||..++| +..++.++..+++ .+ .|. ...|+|+
T Consensus 258 ~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~-~l~~~GNtssas----ip~~L~~~~~~~~-~~-~ll-~~~G~G~ 329 (353)
T PRK12880 258 DEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNF-IMEKYANLSACS----LPALLCELDTPKE-FK-ASL-SAFGAGL 329 (353)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh-hHHhhCCHHHHH----HHHHHHHHHHcCC-cE-EEE-EEEchhh
Confidence 99999999999999999999999999999887321 112256655444 5555555554433 13 333 3357777
Q ss_pred eEEEEEEec
Q 012506 431 GAAAVFERG 439 (462)
Q Consensus 431 g~A~v~~~~ 439 (462)
.++.++.+.
T Consensus 330 s~g~~ll~~ 338 (353)
T PRK12880 330 SWGSAVLNF 338 (353)
T ss_pred hheEeEEEE
Confidence 765554444
No 101
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.82 E-value=3.1e-19 Score=179.64 Aligned_cols=234 Identities=18% Similarity=0.223 Sum_probs=172.1
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
.-+|+.+++|.. ++.++.+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|++ .++.+
T Consensus 32 ~~~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~ 103 (324)
T cd00827 32 YTTGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAF 103 (324)
T ss_pred eeeecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCcee
Confidence 347888888864 4788999999999999999999999999999998876654 566788999999997 89999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+++.+|+|++.|+..|+++|++|.++.+|++++|.++..+..
T Consensus 104 ~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~~-------------------------------------- 145 (324)
T cd00827 104 DLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDE-------------------------------------- 145 (324)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcccC--------------------------------------
Confidence 999999999999999999999999999999999998762110
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
+..+..
T Consensus 146 --------------------------------------------------------------------------~~~~~~ 151 (324)
T cd00827 146 --------------------------------------------------------------------------GSALEP 151 (324)
T ss_pred --------------------------------------------------------------------------CCCccc
Confidence 000111
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEE---------Ee-ccC--C-----------CC----C----CccHHHHH
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFA---------AV-GVD--P-----------AI----M----GVGPAVAI 341 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~---------~~-~~~--p-----------~~----~----~~~~~~Ai 341 (462)
..+|||+|+||.+.+... +..++....... .. ... | +. . ......++
T Consensus 152 ~~gdgaaA~ll~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (324)
T cd00827 152 TLGDGAAAMLVSRNPGIL--AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVV 229 (324)
T ss_pred cccCceEEEEEecCcccc--cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHH
Confidence 258999999998765421 111111111000 00 000 0 00 0 01124678
Q ss_pred HHHHHHcCCCCCCccEEEecCCCH-HHHHHHHHHcCCCCCCCCCCCC--ccccCCccchHHHHHHHHHHHH
Q 012506 342 PAAVKSAGLQLDDIDLFEINEAFA-SQFVYCRNKLGLDPEKINVNGG--ALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 342 ~~aL~~AGl~~~DID~~eihdafa-~~~~~~~e~LGl~~~~vn~~GG--~~a~Ghp~gatG~~~~~~~~~q 409 (462)
+++|++.|++ +|||+|-+|+.+. .......++|+++++++..+.- .--+||...++-...+.+++.+
T Consensus 230 ~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~ 299 (324)
T cd00827 230 RKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLES 299 (324)
T ss_pred HHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc
Confidence 8899999999 9999999999999 7778888999998877776431 3448888877766666665543
No 102
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.82 E-value=1.6e-19 Score=185.81 Aligned_cols=243 Identities=18% Similarity=0.178 Sum_probs=166.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
+..+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|+. .++++++.+|+|++.||..|+++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999998765543 455667788899993 7899999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.+|.+|++|+|.++...
T Consensus 171 ~g~~~~vLvv~~e~~s~~~------------------------------------------------------------- 189 (372)
T PRK07515 171 SGSARRVLVVNPEICSGHL------------------------------------------------------------- 189 (372)
T ss_pred cCCCCEEEEEeeecccccc-------------------------------------------------------------
Confidence 9999999999999986510
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|+. | +. .+ ...+|||+|+||++.+.+.+.+
T Consensus 190 -------------~~~-----------d---------------~~----~~-------~lfGDgAaA~vL~~~~~~~~~~ 219 (372)
T PRK07515 190 -------------NFR-----------D---------------RD----SH-------FIFGDVATAVIVERADTATSAG 219 (372)
T ss_pred -------------ccc-----------C---------------CC----CC-------EEecCccEEEEEeeccccccCC
Confidence 000 0 00 01 1258999999999876543222
Q ss_pred -CCceEEEEEEEE-------ec----cCCCC----------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 314 -LPILGVFRTFAA-------VG----VDPAI----------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 314 -~~~~~~i~g~~~-------~~----~~p~~----------~~~~--------~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
..++........ .+ .++.. .+.. ...+++++|+++||+++|||+|.+|+.
T Consensus 220 ~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~ 299 (372)
T PRK07515 220 GFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA 299 (372)
T ss_pred CceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 233332211100 00 01110 1111 246889999999999999999999999
Q ss_pred CHHHHHHHHHH-cCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEE
Q 012506 364 FASQFVYCRNK-LGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 364 fa~~~~~~~e~-LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
...+.....+. ||+.. ++...+ .--+||...++-...+.++...+ +.+ ++.|... .|.|+.+ +++|+
T Consensus 300 ~~~~~d~~~~~llg~~~~~~~~~~~--~~~~GNt~sasi~~~L~~~~~~~--~~G--d~vll~~-~G~G~~~~~~ll~ 370 (372)
T PRK07515 300 NINMNQLIGKKVLGRDATPEEAPVI--LDEYANTSSAGSIIAFHKHSDDL--AAG--DLGVICS-FGAGYSIGSVIVR 370 (372)
T ss_pred CHHHHHHHHHHhccCCCChhhceEe--HHhcCCchhhHHHHHHHHHhccC--CCC--CEEEEEE-ecccHHHHHHHhc
Confidence 99988777777 67643 332222 34488988888766666553322 123 5555543 4555443 33443
No 103
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.80 E-value=2.6e-18 Score=173.57 Aligned_cols=244 Identities=19% Similarity=0.187 Sum_probs=167.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.|++++..++.. .+..+..++..+|++ +.++++++.+|+++++||..|..
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~ 125 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG 125 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence 5778999999999999999999999999999999887654 567788899999996 67999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|. +.+|+++.|.++...
T Consensus 126 ~l~~~~-~~aLVv~~d~~s~~~---------------------------------------------------------- 146 (326)
T PRK05963 126 FVRAQG-KPVLVVAANILSRRI---------------------------------------------------------- 146 (326)
T ss_pred HHHcCC-CeEEEEEechhhccC----------------------------------------------------------
Confidence 999985 899999999875410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + . .....+|||+|+||.+.+...
T Consensus 147 ----------------~~~------------~---------------~-------~---~~~lfGDgA~A~ll~~~~~~~ 173 (326)
T PRK05963 147 ----------------NMA------------E---------------R-------A---SAVLFADAAGAVVLAPSAKAN 173 (326)
T ss_pred ----------------Ccc------------c---------------c-------C---ceEEEeecceEEEEEecCCCC
Confidence 000 0 0 0 011258999999998643210
Q ss_pred hcCCCceE-EEEEEEE--------ec--cCC--------C-CC--Ccc----------HHHHHHHHHHHcCCCCCCccEE
Q 012506 311 RKGLPILG-VFRTFAA--------VG--VDP--------A-IM--GVG----------PAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 311 ~~g~~~~~-~i~g~~~--------~~--~~p--------~-~~--~~~----------~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
.+ ++. .+...+. .+ ..| + .+ ..+ ...+++++|+++|++++|||+|
T Consensus 174 -~~--~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~ 250 (326)
T PRK05963 174 -SG--VLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRF 250 (326)
T ss_pred -Cc--eEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 01 111 1111000 00 001 0 01 001 1357778999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
-+|+.+..+...+.+.||++++++..+ .--+||..+++-...+.+++.+=+-+.| ++.|... .|.|+.+ +++|
T Consensus 251 ~~h~~~~~~~~~~~~~l~l~~~k~~~~--l~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~vll~~-~G~G~~~~~~ll 324 (326)
T PRK05963 251 FPHQANARIVDKVCETIGIPRAKAAST--LETYGNSSAATIPLSLSLANLEQPLREG--ERLLFAA-AGAGMTGGAVVM 324 (326)
T ss_pred EeCCCCHHHHHHHHHHcCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EehhhhheeeEE
Confidence 999999999999999999999886533 3448887666644444333321111123 4555543 5666665 3444
No 104
>PRK06840 hypothetical protein; Validated
Probab=99.79 E-value=1e-17 Score=170.18 Aligned_cols=247 Identities=20% Similarity=0.140 Sum_probs=167.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEe-ccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT-VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~-~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.+.+..+|+.+|++++|+++|+++++||.+++++ ..++.. .+..+..++..+|++ ..+++.++.+|++++.+|..|.
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~ 126 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK 126 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence 5678999999999999999999999999998654 333332 445678899999995 6889999999999999999999
Q ss_pred HHHHc-cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKA-GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228 (462)
Q Consensus 150 ~~I~s-G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a 228 (462)
++|++ |.++.+|+++.|.++.....+
T Consensus 127 ~~l~~~g~~~~~Lvv~~~~~s~~~~~~----------------------------------------------------- 153 (339)
T PRK06840 127 DLLYSDPSIENVLLVGGYRNSDLVDYD----------------------------------------------------- 153 (339)
T ss_pred HHHhcCCCccEEEEEeecccccccCcC-----------------------------------------------------
Confidence 99999 999999999999875511000
Q ss_pred HHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHH
Q 012506 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 308 (462)
Q Consensus 229 ~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~ 308 (462)
+|.. ...| ..+|||+|+||.+.+.
T Consensus 154 ------------------~~~~--------------------------~~~~------------~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 154 ------------------NPRT--------------------------RFMF------------NFAAGGSAALLKKDAG 177 (339)
T ss_pred ------------------CCCe--------------------------eeec------------cCCCceeEEEEEecCC
Confidence 0000 0001 1589999999986432
Q ss_pred HHhcCCCceEE-EEEEE----Ee-----cc----C---------------CCCCC--------ccHHHHHHHHHHHcCCC
Q 012506 309 AMRKGLPILGV-FRTFA----AV-----GV----D---------------PAIMG--------VGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 309 A~~~g~~~~~~-i~g~~----~~-----~~----~---------------p~~~~--------~~~~~Ai~~aL~~AGl~ 351 (462)
+..++.. +...+ .. +. . +..+. .....+++++|+++|++
T Consensus 178 ----~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~ 253 (339)
T PRK06840 178 ----KNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYT 253 (339)
T ss_pred ----CCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCC
Confidence 1112210 00000 00 00 0 00000 01236788999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
++|||+|-+|.........+.+.||++++++. + .--+||...++-...+.+++.+=+.+.| ++.+... .|.|+.
T Consensus 254 ~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~ill~~-~G~G~s 327 (339)
T PRK06840 254 PKDIDYLAILHMKRSAHIALLEGLGLTEEQAI-Y--LDEYGHLGQLDQILSLHLALEQGKLKDG--DLVVLVS-AGTGYT 327 (339)
T ss_pred HHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE-e--HHhccchhhhhHHHHHHHHHHcCCCCCC--CEEEEEE-Eehhhh
Confidence 99999999999988887888999999988764 2 3358998877766555555432111233 4555543 566666
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
...++.+
T Consensus 328 ~~~~~l~ 334 (339)
T PRK06840 328 WAATVIR 334 (339)
T ss_pred eeEEEEE
Confidence 6444433
No 105
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.78 E-value=1e-17 Score=173.44 Aligned_cols=216 Identities=21% Similarity=0.307 Sum_probs=155.4
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|+ +.|.++++.+|+|+++||..|+++|++|++|++||+|+|.++....
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~--------------------- 195 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTL--------------------- 195 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHH---------------------
Confidence 56778899999 5799999999999999999999999999999999999997543100
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.+ +.. .. .+ + ++
T Consensus 196 -~~------------------------~~~-~~-----~l------------------------~-~~------------ 207 (392)
T PRK09185 196 -NG------------------------FNS-LE-----SL------------------------S-PQ------------ 207 (392)
T ss_pred -HH------------------------HHh-cc-----cc------------------------C-CC------------
Confidence 00 000 00 00 0 00
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~ 347 (462)
..+| |+. +|.+ ++||++++||++++ +. .++|.|++.... .|+..+.+...+++++|++
T Consensus 208 ~~~P-fd~~~~G~~-------~gEGaa~vVLe~~~-----~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~ 272 (392)
T PRK09185 208 PCRP-FSANRDGIN-------IGEAAAFFLLERED-----DA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALAD 272 (392)
T ss_pred ccCC-CcCCCCccc-------eeceEEEEEEEEcC-----CC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 0122 322 2322 78999999999871 22 247888877542 2333344556899999999
Q ss_pred cCCCCCCccEEEecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------
Q 012506 348 AGLQLDDIDLFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------- 415 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------- 415 (462)
+||+++|||+++.|.+.+. .|...+. .+|- ..||+...+. +||+++|+|+.+++.++.+|+++--
T Consensus 273 Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~-~~pv~s~K~~--~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~ 349 (392)
T PRK09185 273 AGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD-GVPCSSTKGL--TGHTLGAAGAVEAAICWLALRHGLPPHGWNTG 349 (392)
T ss_pred cCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC-CCceeCCCcc--cccChhhcchHHHHHHHHHHhcCCCCCCCCCC
Confidence 9999999999999999885 4554444 4453 3356666555 7999999999999999999987520
Q ss_pred ------------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..++.++.....||.+.++||++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 350 QPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 137888888888889999999864
No 106
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.77 E-value=6.1e-18 Score=173.30 Aligned_cols=250 Identities=17% Similarity=0.149 Sum_probs=171.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
.++.+|+.+|++++|+++|+++++||.+++++..+ .. .+..+..++..+|++..+++++++ .+|++++.||..|.++
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~ 160 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHH
Confidence 36899999999999999999999999999988765 33 577788999999996568999998 8999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|..+.+|++++|.+|... .
T Consensus 161 ~~~~~~~~aLvv~~e~~s~~~-~--------------------------------------------------------- 182 (361)
T cd00831 161 LEANPGARVLVVSTELCSLWY-R--------------------------------------------------------- 182 (361)
T ss_pred HHHCCCCEEEEEEeeccccee-C---------------------------------------------------------
Confidence 999999999999999987610 0
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+. | +.+. .......+|||+|+||.+.+....
T Consensus 183 ----------------~~-----------d-------~~~~---------------~~~~~lfGDgaaA~ll~~~~~~~~ 213 (361)
T cd00831 183 ----------------GP-----------D-------HRSM---------------LVGNALFGDGAAAVLLSNDPRDRR 213 (361)
T ss_pred ----------------CC-----------C-------cHHH---------------hhhhhhccCCceEEEEEcCCCccc
Confidence 00 0 0000 001122589999999998654321
Q ss_pred cCCCceEEEEEEEEe---------c-----------cCCCCCC---ccHHHHHHHHHHHc--CCCCCCccEEEecCCCHH
Q 012506 312 KGLPILGVFRTFAAV---------G-----------VDPAIMG---VGPAVAIPAAVKSA--GLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~---------~-----------~~p~~~~---~~~~~Ai~~aL~~A--Gl~~~DID~~eihdafa~ 366 (462)
. ..+...+.++... . .++.... .....+++++|+++ |++++|||+|-+|.....
T Consensus 214 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~ 292 (361)
T cd00831 214 R-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRA 292 (361)
T ss_pred c-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChH
Confidence 0 0011111111000 0 0010000 12245788999999 999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 367 QFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 367 ~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
+.....+.||++++++..+ --.--+||..+++-...+.+++.+-+-+.+ ++.+... .|.|.....+
T Consensus 293 i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~~~ 359 (361)
T cd00831 293 VLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRG--DRGLLIA-FGPGFTCESA 359 (361)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCC--CEEEEEE-EcCCceeeee
Confidence 8888899999999886421 002348998888866666666544222233 4554443 4666555443
No 107
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=1.6e-16 Score=181.58 Aligned_cols=266 Identities=22% Similarity=0.245 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCcc------------------ccHHHHHHHHcCCCCCcceEEec
Q 012506 78 LLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQR------------------ASECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~~------------------~~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
|+.+.+.+||+|+|++++.+. +|++|....++... ...+..++..+++ ++|.+.|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence 899999999999999999888 57777665554211 1246678899999 79999999
Q ss_pred CCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHH
Q 012506 136 RQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 215 (462)
Q Consensus 136 ~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~ 215 (462)
++|||++.|+++|+..|++|++|++|++|+..+-.....+. +++
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~--------------------------------~~~---- 215 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL--------------------------------FSA---- 215 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee--------------------------------eec----
Confidence 99999999999999999999999999999988644211100 000
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCCCC
Q 012506 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQ 293 (462)
Q Consensus 216 ~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~s~ 293 (462)
.| .+++|..+++ |+. +|++
T Consensus 216 ---------------~g------------------------~ls~~g~c~~-------------fd~~adG~v------- 236 (1061)
T COG3321 216 ---------------GG------------------------MLSPDGRCKA-------------FDADADGYV------- 236 (1061)
T ss_pred ---------------cc------------------------CcCCCCccee-------------cccCCCCEE-------
Confidence 00 1223333322 443 4554
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC--C---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH-
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI--M---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ- 367 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~--~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~- 367 (462)
.++|+++|+|.+.+.|.+-|.+|++.|.|.+++...-.. . ..+-..+++++|+++|+++++|+|+|.|..-+..
T Consensus 237 ~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lG 316 (1061)
T COG3321 237 RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLG 316 (1061)
T ss_pred EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCc
Confidence 689999999999999999999999999999987643222 1 1233679999999999999999999999877653
Q ss_pred ---HHHHH-HHcCCC-CCCCCCCCCccc-cCCccchHHHHHHHHHHHHHHhcC---------------------------
Q 012506 368 ---FVYCR-NKLGLD-PEKINVNGGALA-IGHPLGTTGARCVATLLHEMKRRG--------------------------- 414 (462)
Q Consensus 368 ---~~~~~-e~LGl~-~~~vn~~GG~~a-~Ghp~gatG~~~~~~~~~qL~~~~--------------------------- 414 (462)
+..++ ..+|-. +......|..+. +||+-.|.|+..++..+.+|+++.
T Consensus 317 DpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~ 396 (1061)
T COG3321 317 DPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEA 396 (1061)
T ss_pred CHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCC
Confidence 22222 334322 233334444444 999999999999999999999862
Q ss_pred ------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 ------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 ------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++++=+++.+-+|.++-+|+|-..
T Consensus 397 ~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 397 TPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred cCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 02567777777777888999998543
No 108
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.73 E-value=2.7e-17 Score=170.01 Aligned_cols=250 Identities=16% Similarity=0.153 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
+++..+|+.+|+++||+++|+++++||.||+++.. +.. .|..+..++..+|++..+ .++.++.+|++++++|..|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 45678899999999999999999999999998874 444 577788999999997544 478999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
.|++|..+.||++++|..|.....
T Consensus 181 ~~~~~~~~~vLvv~~e~~s~~~~~-------------------------------------------------------- 204 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTILGFRP-------------------------------------------------------- 204 (391)
T ss_pred HHHhCCCCeEEEEEEEcChhhccC--------------------------------------------------------
Confidence 999999999999999997541100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|.. + ..++ ...++..+|||+|+||...+...
T Consensus 205 -----------------~~~----------~-------~~~d---------------~~~~~lFGDGAaA~vl~~~~~~~ 235 (391)
T PLN03169 205 -----------------PSP----------D-------RPYD---------------LVGAALFGDGAAAVIIGADPIPV 235 (391)
T ss_pred -----------------CCc----------c-------chhh---------------hhhhhhccCceEEEEEecCCCcc
Confidence 000 0 0000 00112358999999998654320
Q ss_pred hcCCCceEEEEEEEEecc---C--------CC----CCCc--------cHHHHHHHHHHHcCCCCCCcc--EEEecCCCH
Q 012506 311 RKGLPILGVFRTFAAVGV---D--------PA----IMGV--------GPAVAIPAAVKSAGLQLDDID--LFEINEAFA 365 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~---~--------p~----~~~~--------~~~~Ai~~aL~~AGl~~~DID--~~eihdafa 365 (462)
. .++.-.+........ + +. .++. .....++++|+++|++++||| +|-+|+++.
T Consensus 236 -~-~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~ 313 (391)
T PLN03169 236 -S-ESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGP 313 (391)
T ss_pred -c-CCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCH
Confidence 0 011112222221100 0 00 0010 123467889999999999999 999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhc---CCCCcEEEEEeecccceeEE
Q 012506 366 SQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRR---GRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~---~~~~~~gl~~~~~G~G~g~A 433 (462)
.+.....+.|||+++++..+ --.--+||...+|-...+.+++.+-+.+ .+ +++|... .|.|+.+.
T Consensus 314 ~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~g--d~~ll~a-fG~G~s~~ 382 (391)
T PLN03169 314 AILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDE--EWGLILA-FGPGITFE 382 (391)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCC--cEEEEEE-EcccHhHH
Confidence 99999999999999876521 0022378877777555555544332211 23 6666653 56665553
No 109
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.71 E-value=1.1e-16 Score=165.95 Aligned_cols=253 Identities=17% Similarity=0.122 Sum_probs=170.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++.++.. .|..+..++..+|++..+ ..+.++.+|++++++|..|.++
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~l 183 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH--IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDL 183 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC--CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHH
Confidence 3788999999999999999999999999999988765 577888999999996443 2556777999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.++.||++++|.+|....
T Consensus 184 i~~~~~~~vLVv~~e~~s~~~~---------------------------------------------------------- 205 (399)
T PLN03171 184 AENNRGARVLVVAAEITLLLFN---------------------------------------------------------- 205 (399)
T ss_pred HHhCCCCeEEEEEEeccccccC----------------------------------------------------------
Confidence 9999999999999999876210
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
|. |+ .+.+. ....+..+|||+|+||.+.+...+
T Consensus 206 ----------------~~-----------d~-----~~~~~---------------~v~~~LFGDGAaA~vl~~~~~~~~ 238 (399)
T PLN03171 206 ----------------GP-----------DE-----GCFQT---------------LLNQGLFGDGAAAVIVGADADAAE 238 (399)
T ss_pred ----------------CC-----------Cc-----ccHHh---------------hhccccccCccEEEEEecCCCCCC
Confidence 00 00 00111 112233699999999987543211
Q ss_pred cCCCceEEEEEEEEeccCCC----------------CCC-ccHHHHH----HHHHHH---------cCCCCCCccEEEec
Q 012506 312 KGLPILGVFRTFAAVGVDPA----------------IMG-VGPAVAI----PAAVKS---------AGLQLDDIDLFEIN 361 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~p~----------------~~~-~~~~~Ai----~~aL~~---------AGl~~~DID~~eih 361 (462)
. ....+..+.... .|. .+. ......+ ++++++ +|++++|||++ +|
T Consensus 239 ~---~~~~l~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~H 313 (399)
T PLN03171 239 R---PLFEIVSAAQAI-IPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VH 313 (399)
T ss_pred C---CceEEEEeeeEE-ecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-Ec
Confidence 1 111333222211 110 011 1112233 555554 58999999998 89
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhc--CC-CCcEEEEEeecccceeEE-EEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRR--GR-DCRFGVISMCIGTGMGAA-AVF 436 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~--~~-~~~~gl~~~~~G~G~g~A-~v~ 436 (462)
+.+..+...+.++|||+++++..+ --.--+||..++|-...+.+++.+.+.. .| +.++.|... .|.|+.+. ++|
T Consensus 314 q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~-fG~Glt~~~~ll 392 (399)
T PLN03171 314 PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMA-FGPGLTVDAMLL 392 (399)
T ss_pred CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEE-EcccHHHHHHHh
Confidence 999999999999999999987521 1123489999988777777777666421 11 014555543 56565553 344
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
+.
T Consensus 393 ~~ 394 (399)
T PLN03171 393 HA 394 (399)
T ss_pred hc
Confidence 43
No 110
>PLN03168 chalcone synthase; Provisional
Probab=99.67 E-value=2.5e-15 Score=155.23 Aligned_cols=254 Identities=15% Similarity=0.108 Sum_probs=169.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
...+|+.+|+++||+++|++++|||.||+++.++.. .|..+..++..+|++..+ .++.++.+|++++++|..|...|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999988743 577899999999996443 48999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|....||++++|.+|....
T Consensus 178 ~~~~~~~VLVV~~E~~S~~~~----------------------------------------------------------- 198 (389)
T PLN03168 178 ENNKGARVLAVASEVTAVTYR----------------------------------------------------------- 198 (389)
T ss_pred HhCCCCEEEEEEEehhhhhcc-----------------------------------------------------------
Confidence 999999999999999875110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|. + ...+++ -.++..+|||+|+||...+... .
T Consensus 199 --------------~~~------------~-----~~~~~~---------------~~~~LFGDGAaAvvl~~~~~~~-~ 231 (389)
T PLN03168 199 --------------APS------------E-----NHLDGL---------------VGSALFGDGAGVYVVGSDPKPE-V 231 (389)
T ss_pred --------------Ccc------------c-----ccHHHH---------------hccccccCccEEEEEecCCCCc-c
Confidence 000 0 000000 0122368999999998743211 0
Q ss_pred CCCceEEEEEEEEeccC------CC---CCCc--------------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 313 GLPILGVFRTFAAVGVD------PA---IMGV--------------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~------p~---~~~~--------------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
. .++-.+..+.....+ +. ..+. .....+.++|+..|+...|+|+|-+|+.......
T Consensus 232 ~-~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~ 310 (389)
T PLN03168 232 E-KALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILD 310 (389)
T ss_pred C-CcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHH
Confidence 0 121123222111000 00 0000 0134556677788888888999999999999999
Q ss_pred HHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC-----CCCcEEEEEeecccceeEE-EEEE
Q 012506 370 YCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAA-AVFE 437 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-----~~~~~gl~~~~~G~G~g~A-~v~~ 437 (462)
...++|||+++++-.+ .-+--+||...+|-...+-++..+-.+++ .+.+++|... .|.|+.+. ++|+
T Consensus 311 ~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~a-fGpG~t~~~~llr 384 (389)
T PLN03168 311 QVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIG-FGPGLTLEVLVLR 384 (389)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEE-Ecchhhhhhhhhe
Confidence 9999999999887532 11233788888876666655544311221 1115667654 56666653 3444
No 111
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.67 E-value=6.2e-15 Score=155.28 Aligned_cols=94 Identities=18% Similarity=0.257 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
.+.+...+++++|+++|++|+|||.||+. .++... .|..+.+++.++|++.++.+++++ .+|++++.+|..|.++|+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p-~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNP-TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCC-CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 45677788999999999999999999985 445443 678899999999997688999998 899999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
+|....+||+++|.+|.
T Consensus 266 ~~~~~~aLVVstE~~S~ 282 (521)
T PLN02854 266 ANPNSYAVVVSTENITL 282 (521)
T ss_pred hCCCCeEEEEEEeeeec
Confidence 99999999999999873
No 112
>PLN03170 chalcone synthase; Provisional
Probab=99.67 E-value=4.9e-16 Score=160.92 Aligned_cols=256 Identities=13% Similarity=0.090 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|++++|||.||+++.++.. .|..+..++..+|++..+ .++.++.+|++++.+|..|.+.|+
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 45699999999999999999999999998876532 577889999999996443 478999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|....||++++|.+|.....
T Consensus 184 ~~~~~~vLVV~~E~~S~~~~~----------------------------------------------------------- 204 (401)
T PLN03170 184 NNRGARVLVVCSEITAVTFRG----------------------------------------------------------- 204 (401)
T ss_pred cCCCCeEEEEEEehhhhccCC-----------------------------------------------------------
Confidence 999999999999998751100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|. |+ ..+++ ..++..+|||+|+||...+... .
T Consensus 205 --------------~~-----------~~------~~~~~---------------~~~~LFGDGAaAvVl~~~~~~~-~- 236 (401)
T PLN03170 205 --------------PS-----------ES------HLDSM---------------VGQALFGDGAAAVIVGADPDER-V- 236 (401)
T ss_pred --------------cc-----------cc------hhhhh---------------hhhhhhhceeEEEEEecCCccc-c-
Confidence 00 00 00000 0112258999999998743211 0
Q ss_pred CCceEEEEEEEEeccC------CCC---CC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 314 LPILGVFRTFAAVGVD------PAI---MG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~------p~~---~~--------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
..+..++.+....-.+ +.. .+ ......++++|+++|++.+|||+|-+|.....+...
T Consensus 237 ~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~ 316 (401)
T PLN03170 237 ERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQ 316 (401)
T ss_pred cCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHH
Confidence 1111123322111000 000 00 011347778899999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeE-EEEEEecc
Q 012506 371 CRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGA-AAVFERGD 440 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~-A~v~~~~~ 440 (462)
+.+.||++++++..+ --+--+||...+|-...+-+++++...++ ++ .+++|... .|.|+.+ +++|+...
T Consensus 317 v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 317 VEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFG-FGPGLTVETVVLHSVP 392 (401)
T ss_pred HHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEE-eCchHhHHhHHheecc
Confidence 999999999886421 11233777777775544444433221221 11 14666643 5666665 44666533
No 113
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.67 E-value=2e-15 Score=155.90 Aligned_cols=254 Identities=15% Similarity=0.091 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.||+++.++.. .|..+..++..+|++..+. .+.++.+|++++.+|..|.+.|+
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999998887643 5678889999999975553 46889999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|....|||+++|.+|....
T Consensus 180 ~~~~~~vLVV~~E~~S~~~~------------------------------------------------------------ 199 (393)
T PLN03172 180 NNAGSRVLVVCSEITAVTFR------------------------------------------------------------ 199 (393)
T ss_pred cCCCCeEEEEEEehhhhhhc------------------------------------------------------------
Confidence 99999999999999874100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
+| ++ .+.+.+. .++..+|||+|+||...+... .
T Consensus 200 -------------~~------------~d-----~~~~~~v---------------~~~LFGDGAaAvVl~~~~~~~-~- 232 (393)
T PLN03172 200 -------------GP------------SD-----THLDSLV---------------GQALFGDGAAAVIIGADPDTK-I- 232 (393)
T ss_pred -------------cc------------cc-----ccHHhhh---------------ccchhcCceEEEEEecCCCCc-c-
Confidence 00 00 0011110 112258999999998743211 0
Q ss_pred CCceEEEEEEEEe---ccCC------CCCC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 314 LPILGVFRTFAAV---GVDP------AIMG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 314 ~~~~~~i~g~~~~---~~~p------~~~~--------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
.++.-++.++... ..+. ...| ......+++.|++.|++..|||+|-+|.....+...
T Consensus 233 ~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~ 312 (393)
T PLN03172 233 ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQ 312 (393)
T ss_pred cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHH
Confidence 1122234433211 1100 0001 012356678899999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEEE-EEEe
Q 012506 371 CRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAAA-VFER 438 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A~-v~~~ 438 (462)
..+.||++++++-.+ --+--+||...+|-...+-++.++-..++ ++ .+++|... .|.|+.+.+ +|+.
T Consensus 313 v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~ 386 (393)
T PLN03172 313 VEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFG-FGPGLTVETVVLHS 386 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEE-eCCcceeeeeeeEe
Confidence 999999999876542 11233777777764444444432211111 11 15667654 677777644 5544
No 114
>PLN03173 chalcone synthase; Provisional
Probab=99.64 E-value=3.8e-15 Score=153.74 Aligned_cols=247 Identities=16% Similarity=0.126 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.|++.+.++.. .|..+..++..+|++..+ ..+.++.+|+++..+|..|.+.|+
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999998887643 567888999999996544 356789999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
++..+.|||+++|.+|.....
T Consensus 180 ~~~~~~vLVV~~E~~S~~~~~----------------------------------------------------------- 200 (391)
T PLN03173 180 NNKGARVLVVCSEITAVTFRG----------------------------------------------------------- 200 (391)
T ss_pred hCCCCeEEEEEEehhhhhhCC-----------------------------------------------------------
Confidence 999999999999998741000
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|. + | ..+.+ -.++..+|||+|+||...+. .+
T Consensus 201 --------------~~------------d--~---~~~~~---------------v~~~LFGDGAaAvvl~~~~~---~~ 231 (391)
T PLN03173 201 --------------PS------------D--T---HLDSL---------------VGQALFGDGAAAIIIGSDPV---LG 231 (391)
T ss_pred --------------cc------------c--c---chhhh---------------hhhhhhcCceEEEEEeCCCC---CC
Confidence 00 0 0 00000 01122589999999986432 12
Q ss_pred C-CceEEEEEEEEe---ccC-----------------CCCCC---ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 314 L-PILGVFRTFAAV---GVD-----------------PAIMG---VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 314 ~-~~~~~i~g~~~~---~~~-----------------p~~~~---~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
. .+.-++.++... ..+ ++.+. ......++++|++.|++.+|||+|-+|+.......
T Consensus 232 ~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~ 311 (391)
T PLN03173 232 VEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILD 311 (391)
T ss_pred cCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHH
Confidence 1 111122222210 000 11110 01235778899999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----C-CCcEEEEEeecccceeE
Q 012506 370 YCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----R-DCRFGVISMCIGTGMGA 432 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~-~~~~gl~~~~~G~G~g~ 432 (462)
...+.|||+++++-.+ --+--+||...+|-...+-+++++-++++ + +.+++|... .|.|+.+
T Consensus 312 ~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~a-fGpG~t~ 379 (391)
T PLN03173 312 QVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFG-FGPGLTV 379 (391)
T ss_pred HHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEE-eCchHHH
Confidence 9999999999876432 11223778777775555555543211111 1 125666654 5656544
No 115
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.64 E-value=1.5e-14 Score=149.07 Aligned_cols=111 Identities=8% Similarity=0.055 Sum_probs=96.5
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
..++.|.+++.+... ..+++..+|+.+|++++|+++ ++++||.+++++..+... .+..+..++..+|++..++
T Consensus 29 ~~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~ 101 (379)
T TIGR01835 29 EKFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCR 101 (379)
T ss_pred HHHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCce
Confidence 346667777777653 257778999999999999998 899999999999887754 5678889999999976689
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
++.+..+|++++.||..|.+.|++|..+.+||+++|..
T Consensus 102 ~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a 139 (379)
T TIGR01835 102 SFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIA 139 (379)
T ss_pred EEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh
Confidence 99999999999999999999999999999999999873
No 116
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.63 E-value=3.1e-14 Score=149.90 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
....+++..|++++|+++|++|+|||.+|+ +.++... .|..+.+++.++|++.++..++++ .+|++++.+|..|.++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHH
Confidence 356889999999999999999999999987 6666544 678899999999997688999999 6999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|....+||+++|.+|.
T Consensus 248 l~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 248 LQVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HHcCCCCEEEEEEEecccc
Confidence 9999999999999999886
No 117
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.59 E-value=9.3e-14 Score=137.12 Aligned_cols=91 Identities=19% Similarity=0.299 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.+..+|+.+|+++||+++|++++|||.+++|+.. . ....+..++..+|+ |.+.++.+|+|+.+||..|+.+
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~-~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~l 118 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLL-N---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAML 118 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCC-C---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999742 1 23467788889998 5699999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.+|+|||++.|.+|.
T Consensus 119 I~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 119 VDGGFADRVLAATSSHYAT 137 (327)
T ss_pred HhCCCCCEEEEEEecccch
Confidence 9999999999999998875
No 118
>PLN02932 3-ketoacyl-CoA synthase
Probab=99.54 E-value=1.5e-13 Score=144.00 Aligned_cols=94 Identities=14% Similarity=0.256 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|++++|+++|++|++||.+|+.+.++. . .|..+.+++..+|++.++..++++ .+|++++.+|..|.++|+
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~-~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-P-TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-C-CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 6789999999999999999999999999988776 3 688899999999997689999999 899999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
+|....+||+++|.+|.
T Consensus 226 ~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 226 VHRNTYALVVSTENITQ 242 (478)
T ss_pred cCCCCeEEEEEEeeccc
Confidence 99999999999999987
No 119
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.54 E-value=4.7e-13 Score=134.29 Aligned_cols=234 Identities=21% Similarity=0.293 Sum_probs=176.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+++...|+++|++++|+++++|+++|+.|++|+-+.... .-..+..++..+|+++...++++..+|-+|..||..|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999877654 445678899999998888999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
.|.+|..+.+||+|.|.--..
T Consensus 126 ~v~s~~~~~~LvI~sD~a~~~----------------------------------------------------------- 146 (377)
T COG3425 126 WVESGMISYGLVIGADTAQYA----------------------------------------------------------- 146 (377)
T ss_pred HHHcCCccceEEEeehhhccC-----------------------------------------------------------
Confidence 999999999999999873210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|... ..| + .++||+|+|+..-.
T Consensus 147 -----------------~~~~------------------------~E~-------t-------~GAGavA~lIg~n~--- 168 (377)
T COG3425 147 -----------------PGDA------------------------LEY-------T-------AGAGAVAFLIGKNP--- 168 (377)
T ss_pred -----------------CCcc------------------------cCc-------c-------CCCceEEEEEccCC---
Confidence 1000 001 1 37899999987621
Q ss_pred hcCCCceEEEEEEEEecc------CCCCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV------DPAIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~------~p~~~------~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
++++.+.+.+.... .|+.. + .....|++..+++.|++++|.|++-+|.+|+-+..-
T Consensus 169 ----~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 169 ----PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred ----CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHH
Confidence 12333333333221 12111 0 012457778889999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcc-ccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccce
Q 012506 371 CRNKLGLDPEKINVNGGAL-AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 430 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~GG~~-a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~ 430 (462)
.++.||+..++|-++=-.. ..|++..++....++.++.+-+ ..| -++++.+- |.|-
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G-~rIl~~SY--GSGa 301 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPG-DRILLFSY--GSGA 301 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCC-CEEEEEee--CCCc
Confidence 9999999977666542222 3899999998888888887766 333 28888874 4443
No 120
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.54 E-value=2.1e-13 Score=142.51 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=92.9
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHH---HHcCCCCCcc
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA---FYAGFPETVP 130 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a---~~~Glp~~~p 130 (462)
.+|.++..+.-. -.+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..++ ..+|.+ ++.
T Consensus 36 ~~GI~~r~~ava----~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~~-~~~ 109 (459)
T PLN02577 36 TIGLGQDCMAFC----TDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGNT-DIE 109 (459)
T ss_pred hhccceeEeccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCCC-CcE
Confidence 467777665321 25789999999999999999999999999999999988654 566676664 467874 789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCC--CEEEEEeecCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLESMT 169 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~--d~vLv~G~E~ms 169 (462)
+++++.+|+++.+||..|.+.|++|.. +.+||+|+|.++
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~ 150 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAV 150 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhh
Confidence 999999999999999999999999985 999999999864
No 121
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.52 E-value=2.8e-13 Score=142.58 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
.++++..|+++||+++|++|+|||.+|+.+. +... .|..+.+++.++|++.++.+++++ .+|++++.+|..|.++|+
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~-~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCC-CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 5678899999999999999999999988654 4433 678899999999997678999999 699999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
++....+||+++|.+|.
T Consensus 254 a~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 254 VHPNSYALVISMENITL 270 (511)
T ss_pred cCCCCeEEEEEEEeccc
Confidence 99999999999999983
No 122
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.51 E-value=1.2e-12 Score=129.67 Aligned_cols=91 Identities=19% Similarity=0.329 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.+..+|+.+|+++||+++|++++|||.+++|+... ....+..++..+|+ |++.++.+|+|+..++..|+.+
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~----Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN----QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC----CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 467788999999999999999999999999997532 23456677888887 7999999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.+|+||+++.|.++.
T Consensus 125 I~SG~ad~VLVV~Ssh~s~ 143 (337)
T PRK08304 125 IDGGFADRVLAATSSHFAT 143 (337)
T ss_pred HhcCCCCEEEEEEcchhhh
Confidence 9999999999999999876
No 123
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.36 E-value=4.1e-11 Score=125.28 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=91.7
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHH---cCCCCCcc
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY---AGFPETVP 130 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~---~Glp~~~p 130 (462)
.+|.++..+.-. ..+.+..+|+..|++++|+++++++++||.|++|+.++... .+..+..++.. +|. .++.
T Consensus 33 ~~GI~~rr~av~----~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~-~~~~ 106 (454)
T TIGR01833 33 TIGLGQTKMGFC----TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TDVE 106 (454)
T ss_pred eechhheecccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCC-CCce
Confidence 477777664211 26789999999999999999999999999999999988765 56677777764 456 4789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCC--CEEEEEeecC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLES 167 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~--d~vLv~G~E~ 167 (462)
+++++.+|+++.+||..|.+.|++|.. +.+||++.|.
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 999999999999999999999999974 9999999998
No 124
>PLN00415 3-ketoacyl-CoA synthase
Probab=99.31 E-value=5.3e-11 Score=123.69 Aligned_cols=95 Identities=22% Similarity=0.259 Sum_probs=80.9
Q ss_pred CHHHHHHH-HHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecC-CCchHHHHHHHHHHH
Q 012506 74 YPDDLLAP-VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAA 151 (462)
Q Consensus 74 ~~~eL~~~-A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~-~CsSgl~Ai~~Aa~~ 151 (462)
...||... |++++|+++|++|++||.+|+. .++... .|..+..+...+|++.++..+.++. +|++++.+|..|.+.
T Consensus 132 ~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~-~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 132 HESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNP-NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCC-CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHH
Confidence 44455544 8889999999999999988864 444433 5777888999999987899999997 999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
++++....+|++++|.+|.
T Consensus 210 l~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 210 LKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHhCCCCEEEEEEEecccc
Confidence 9999999999999999876
No 125
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.30 E-value=1.5e-10 Score=114.18 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
....+|+.+|+++||+++|++++|||.+++|+.+.. ..++..++..+|+ |.+.|+.+|||+..+|..|+..|
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ----~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ----ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC----cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 344589999999999999999999999999998732 2344578888997 55999999999999999999999
Q ss_pred HccCCCEEEEEee
Q 012506 153 KAGFYDIGIGAGL 165 (462)
Q Consensus 153 ~sG~~d~vLv~G~ 165 (462)
++|.+|+||++-.
T Consensus 124 aSG~Ad~VLavts 136 (334)
T PRK12404 124 NSGGAKYVLTGAS 136 (334)
T ss_pred HcCCCCEEEEEeC
Confidence 9999999999754
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.18 E-value=1.7e-10 Score=126.48 Aligned_cols=236 Identities=23% Similarity=0.279 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc----c--------------ccHHHHHHHHcCCCCCcceE
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ----R--------------ASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~----~--------------~~~a~~~a~~~Glp~~~p~~ 132 (462)
-..|+.++..+|+-|+||.|.+.- ++++|...+..++ . ...+..++..+.+ .+|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 356999999999999999998876 4666665444320 0 1234445555667 68999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
.++++|+|+++|+..|.+.|++|+||.+||.|+...-.... .+.- .+.|
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~-----------------------slQF----lRLg---- 213 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTT-----------------------SLQF----LRLG---- 213 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccch-----------------------hhHH----HHhc----
Confidence 99999999999999999999999999999999877533100 0000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
.+++|..++ .||. .+|--
T Consensus 214 --------------------------------------------mls~dGsCk-------------aFDe-----agnGY 231 (2376)
T KOG1202|consen 214 --------------------------------------------MLSPDGSCK-------------AFDE-----AGNGY 231 (2376)
T ss_pred --------------------------------------------CcCCCCccc-------------chhc-----cCCce
Confidence 123333332 2554 23333
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC------CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH-
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA------IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA- 365 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~------~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa- 365 (462)
--+||.++|+|.+...|++.=..++ -...+...-. ..|.--...++..|+++||.|+++-|+|.|..-+
T Consensus 232 ~Rseg~~avllqrk~~ArRvYAtil----nartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 232 CRSEGVVAVLLQRKSLARRVYATIL----NARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTK 307 (2376)
T ss_pred eecCceEEEEEehhHHHHHHHHHhh----ccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCC
Confidence 4689999999999999988543332 2222111000 1111235688999999999999999999996554
Q ss_pred ---------HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 366 ---------SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 366 ---------~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
+...+|... -+|+-+..-+..+||+-=|+|.-.++.++..|.+.
T Consensus 308 VGDpQEaN~it~~fC~~R----t~pLLIGSvKSNMGHaEPASGv~alaKillsmE~g 360 (2376)
T KOG1202|consen 308 VGDPQEANGITRFFCATR----TTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEG 360 (2376)
T ss_pred CCChHHhhhHHHHHhhcC----CCceEeeeccccCCCCCccchHHHHHHHHHHHHhC
Confidence 333333311 12322222233389999999999999999988865
No 127
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.16 E-value=3.3e-10 Score=110.08 Aligned_cols=92 Identities=24% Similarity=0.389 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC-----cEEEEeccCCC-------------C----------ccccHHHHHHHHcCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG-----DIVVGTVLAPG-------------S----------QRASECRMAAFYAGFP 126 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id-----~vivG~~~~~~-------------~----------~~~~~a~~~a~~~Glp 126 (462)
...|+..++.+||+++|+++..++ ++++|+..++. . .....+..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 457889999999999999886543 37778766521 0 011246688899999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
++|.++++++|+||+.||..|+++|++|++|++||+|+|..
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~ 206 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAP 206 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--
T ss_pred -CCccccccccccccccccchhcccccccccccccccccccc
Confidence 68999999999999999999999999999999999999954
No 128
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=4.9e-09 Score=101.68 Aligned_cols=247 Identities=18% Similarity=0.182 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~ 153 (462)
...|..++.++||+.+++.++|||.+++.++++-.. |.+-..+...+||+.++.-+-+ .-||..|..++..|++..+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~--Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLAT--PSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccC--CChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 467899999999999999999999999999876553 4455567789999766665554 6789999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
..--..||++.+|..|-...
T Consensus 154 a~P~~~vlvV~vELCSLt~~------------------------------------------------------------ 173 (356)
T COG3424 154 AAPDANVLVVCVELCSLTYV------------------------------------------------------------ 173 (356)
T ss_pred hCccceEEEEEeeeeeeeee------------------------------------------------------------
Confidence 99899999999999764100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc-
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK- 312 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~- 312 (462)
+. ++++. + .-..+..+||+||+|++-...++..
T Consensus 174 ~~----------d~t~s---------------------~---------------lVgtaLF~DG~AA~vv~gd~~~~~~~ 207 (356)
T COG3424 174 FA----------DDTKS---------------------N---------------LVGTALFGDGAAAVVVSGDRRAEGKR 207 (356)
T ss_pred cC----------CCCcc---------------------c---------------ceeeeeecCCeeEEEEeccccccccC
Confidence 00 00000 0 0112346899999999874443332
Q ss_pred CCCceEEEEEEEEec--cCCCCCC---------------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 313 GLPILGVFRTFAAVG--VDPAIMG---------------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 313 g~~~~~~i~g~~~~~--~~p~~~~---------------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
...+ .|.+....- ...+.|+ ......+...|...|++.+||+.|-+|-.-....-
T Consensus 208 ~~~p--~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVid 285 (356)
T COG3424 208 PLRP--DILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVID 285 (356)
T ss_pred CCCc--eecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHH
Confidence 2222 122222110 0001111 12356788899999999999999999999888888
Q ss_pred HHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 370 YCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
...+.|||+++....+=-. --+||-..+|-+.-+-+.+.+- .+.+ .+||... .|-|.-.=.+
T Consensus 286 a~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g--~~Gl~~A-~GPGf~sElv 348 (356)
T COG3424 286 AYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSG--SRGLMFA-MGPGFCSELV 348 (356)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCC--cceeeee-cCCcceeeee
Confidence 8889999998744322111 1267777777665555555443 2333 7888865 5665554333
No 129
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.55 E-value=6.4e-07 Score=87.82 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~ 153 (462)
.+.++..+++++|+++|++|+|||.+|+.+.+... -|..+.++..++|+...+..+.+ ..|||+|+-+|..|.++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 45688899999999999999999999987766433 57789999999999777888876 6689999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
.-.-..+|++.+|..|.
T Consensus 161 ~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 161 AHPNSYALVVSTENISA 177 (290)
T ss_pred hCCCcEEEEEEEeeccc
Confidence 99999999999999886
No 130
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.33 E-value=1.1e-05 Score=78.98 Aligned_cols=84 Identities=18% Similarity=0.289 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHcc
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG 155 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG 155 (462)
..|..+|++.+|+++++.++|||.++-|-.+... ..+...+..+++ |.+-+-.+||+...+|.+++..|..|
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~----i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI----ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC----CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh----HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 4588999999999999999999999999876543 234566667777 88899999999999999999999999
Q ss_pred CCCEEEEEeecC
Q 012506 156 FYDIGIGAGLES 167 (462)
Q Consensus 156 ~~d~vLv~G~E~ 167 (462)
.++.+|++-.-.
T Consensus 124 ~a~~vla~tSSH 135 (329)
T PF07451_consen 124 FADYVLAATSSH 135 (329)
T ss_dssp S-SEEEEEEEE-
T ss_pred CcceEEEEeccc
Confidence 999999975433
No 131
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=98.33 E-value=1.3e-06 Score=75.28 Aligned_cols=97 Identities=22% Similarity=0.270 Sum_probs=63.6
Q ss_pred eEEEEEEEEeccC---CCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHH-HHcCCCC--CCCC
Q 012506 317 LGVFRTFAAVGVD---PAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCR-NKLGLDP--EKIN 383 (462)
Q Consensus 317 ~~~i~g~~~~~~~---p~~~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~-e~LGl~~--~~vn 383 (462)
|+.|.|++..... .... +.+...+++++|+++|++++|||+++.|..-+.. +...+ +.++-.. .++.
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 4678888887633 2211 2345789999999999999999999999988764 33333 3344432 2344
Q ss_pred CCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 384 VNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 384 ~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++.=+..+||+.+++|+.+++.++..|+.+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eeccccccccccccchHHHHHHHHHHHhcC
Confidence 444455699999999999999999999875
No 132
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=98.24 E-value=2.9e-06 Score=69.20 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=59.1
Q ss_pred HHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 012506 345 VKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 424 (462)
Q Consensus 345 L~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~ 424 (462)
|+++|++++|||+|-+|+.+........+.+|++++++..+ .-.+||...++-...+.+++.+-+-+.+ ++.+...
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~~~g~~~~G--d~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDN--LAEYGNTGSASIPINLADALEEGRIKPG--DRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T--HHHH-B-GGGHHHHHHHHHHHTTSSCTT--EEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH--HhccCcchhhhHHHHHHHHHHcCCCCCC--CEEEEEE
Confidence 78999999999999999999999888999999999877654 3559999999877777666653322334 5555543
Q ss_pred ecccceeEEEEE
Q 012506 425 CIGTGMGAAAVF 436 (462)
Q Consensus 425 ~~G~G~g~A~v~ 436 (462)
.|.|+..+.++
T Consensus 77 -~G~G~~~~~~~ 87 (90)
T PF08541_consen 77 -FGAGFSWGAAV 87 (90)
T ss_dssp -EETTTEEEEEE
T ss_pred -EEhhheeEEEE
Confidence 56666665443
No 133
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=98.09 E-value=1.9e-05 Score=75.39 Aligned_cols=95 Identities=12% Similarity=0.118 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I 152 (462)
...+|+.+|+++||+++|+++++|+.+|+.+.++.. .|..-..+...+||+.++.-+.+ .-||..|..+|..|....
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~--~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA--APGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE--CS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC--CCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 467899999999999999999999999999887754 45566688899999877666655 678999999999999999
Q ss_pred HccCCCEEEEEeecCCCC
Q 012506 153 KAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~ 170 (462)
++..-..||++-+|..|-
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999999999999999764
No 134
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.04 E-value=1.5e-05 Score=72.67 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp--~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+++...|++.|++.+|++.++++++|+.+++|+-+.--. .-..+..+...+|++ .++..+.+-.+|=+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~-sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK-SKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS-SS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc-cccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 5678999999999999999999999999999998765432 344677888899994 3456788899999999999999
Q ss_pred HHHHHccCCC--EEEEEeecC
Q 012506 149 AAAIKAGFYD--IGIGAGLES 167 (462)
Q Consensus 149 a~~I~sG~~d--~vLv~G~E~ 167 (462)
.+.|+++..+ .+||++.|.
T Consensus 128 ~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 128 VNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp HHHHCSTTSTTEEEEEEEEEE
T ss_pred HHHHhcCCCCCCeEEEEeccc
Confidence 9999999765 999999887
No 135
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.02 E-value=2.2e-06 Score=89.00 Aligned_cols=112 Identities=22% Similarity=0.202 Sum_probs=83.5
Q ss_pred cCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEE
Q 012506 246 VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA 325 (462)
Q Consensus 246 ~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~ 325 (462)
+||++++.++ +|++++.+++++.|| +++.+||+.+||++++++++++.+ + .++.|.+.
T Consensus 187 ~np~a~~~~e------------I~~~~v~~~~~~~dp---~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas 244 (392)
T COG0183 187 ANPKAGFFDE------------ITPEDVLNSPVVADP---LRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNAS 244 (392)
T ss_pred hhHhcCCCCc------------eeeEEecCCceecCC---cccCCCCCChhhhcCceeccccCC---c----eEEEeccc
Confidence 5899886643 566667777777787 999999999999999999997752 1 34444432
Q ss_pred eccCC------------CCCCccHHHHHHHHHHHcCCCCC--CccEEEecCCCHHHHHHHHHHcCCCCC
Q 012506 326 VGVDP------------AIMGVGPAVAIPAAVKSAGLQLD--DIDLFEINEAFASQFVYCRNKLGLDPE 380 (462)
Q Consensus 326 ~~~~p------------~~~~~~~~~Ai~~aL~~AGl~~~--DID~~eihdafa~~~~~~~e~LGl~~~ 380 (462)
.-.+. ..++. ...|..++++.+|+++. ++|++++||+|+..++..+|.|||++.
T Consensus 245 ~i~dga~a~~~~~~~~~~~~~l-~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 245 GINDGAAALLLMSESKAKELGL-APLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred ccccHHHHHHHhhHHHHHHCCC-cHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 11111 11111 23466788999999998 999999999999999999999999864
No 136
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.16 E-value=0.00052 Score=54.75 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=35.3
Q ss_pred EEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 132 ~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
++++.+|++++.||..|..+|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 578999999999999999999999999999999999876
No 137
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=95.53 E-value=0.033 Score=55.05 Aligned_cols=68 Identities=19% Similarity=0.351 Sum_probs=53.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..+++++|+++|++|+|||++.+| -+.++..-+.++++|+..+ .+|.+| +||++....+.+.++|-
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsG--------MGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSG--------MGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccC--------CcchhhHHHHHHHHHHH
Confidence 468999999999999999999876 4455678889999999876 456543 37887777788887776
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 160 ~~ 161 (290)
T PF08392_consen 160 QA 161 (290)
T ss_pred Hh
Confidence 65
No 138
>PLN02932 3-ketoacyl-CoA synthase
Probab=94.78 E-value=0.1 Score=55.48 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ +.+++...+..++||+.+ ..+|.+| .||+|...-+.+..++-
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~g--------mGCSggl~aL~lA~~ll 224 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGG--------MGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEecc--------chhhhHHHHHHHHHHHH
Confidence 478999999999999999999765 567788899999999964 3566643 36777666666666666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 225 ~~~ 227 (478)
T PLN02932 225 QVH 227 (478)
T ss_pred HcC
Confidence 543
No 139
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=94.02 E-value=0.38 Score=46.17 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCC-CCCCCCCCCccccCCccchHHHHH-HHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD-PEKINVNGGALAIGHPLGTTGARC-VATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~-~~~~~~qL 410 (462)
..|++++|+++|++++|||.+-+... +......+.+.+|+. .+.++++ .+|++... +..+...|
T Consensus 12 ~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~---------~~C~s~~~al~~A~~~i 82 (254)
T cd00327 12 FEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVN---------QACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceec---------cHhHHHHHHHHHHHHHH
Confidence 57899999999999999999987643 344456677889995 3333332 24444333 44444444
Q ss_pred HhcCCCCcEEEEEee--cccceeE-EEEEEecccc
Q 012506 411 KRRGRDCRFGVISMC--IGTGMGA-AAVFERGDCA 442 (462)
Q Consensus 411 ~~~~~~~~~gl~~~~--~G~G~g~-A~v~~~~~~~ 442 (462)
+.. ..+++|+..+ .-.|-|. |+||++++..
T Consensus 83 ~~g--~~~~~lv~~~e~~~~gdGAaa~vL~~~~~a 115 (254)
T cd00327 83 QNG--KADIVLAGGSEEFVFGDGAAAAVVESEEHA 115 (254)
T ss_pred HCC--CCCEEEEEecceeeecceEEEEEECcHHHH
Confidence 433 3477777644 2334444 6677776553
No 140
>PLN02377 3-ketoacyl-CoA synthase
Probab=93.88 E-value=0.19 Score=53.83 Aligned_cols=69 Identities=19% Similarity=0.242 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ ..+++...+..++||+.+. .+|.+| .||+|...-+.+..+|-
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g--------mGCsggl~aL~lA~~ll 248 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc--------chhhHHHHHHHHHHHHH
Confidence 468999999999999999999763 2356778889999999753 566643 36777666666666666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 249 ~~~ 251 (502)
T PLN02377 249 QVH 251 (502)
T ss_pred HcC
Confidence 543
No 141
>PLN02192 3-ketoacyl-CoA synthase
Probab=93.82 E-value=0.26 Score=52.78 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=53.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-.+ ..+++...+..++||+.. ..+|.+| .||+|...-+.+..++-
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg--------mGCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG--------MGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc--------chhhhHHHHHHHHHHHH
Confidence 468999999999999999998765 234567888899999964 3455543 36777766666666666
Q ss_pred hcCCCCcEEE
Q 012506 412 RRGRDCRFGV 421 (462)
Q Consensus 412 ~~~~~~~~gl 421 (462)
+...+ +++|
T Consensus 253 ~a~~~-~~aL 261 (511)
T PLN02192 253 QVHPN-SYAL 261 (511)
T ss_pred HcCCC-CeEE
Confidence 54322 4444
No 142
>PRK06158 thiolase; Provisional
Probab=93.31 E-value=0.51 Score=48.96 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=60.8
Q ss_pred eEEEEEEEEeccCC--CCCCcc-HHHHHHHHHHHcCCCCCCccEEEecCCCHH-HHHHHHHHcCCCCCCCCCCCCccccC
Q 012506 317 LGVFRTFAAVGVDP--AIMGVG-PAVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKINVNGGALAIG 392 (462)
Q Consensus 317 ~~~i~g~~~~~~~p--~~~~~~-~~~Ai~~aL~~AGl~~~DID~~eihdafa~-~~~~~~e~LGl~~~~vn~~GG~~a~G 392 (462)
.+.|+|.+...... ...... ...|++++|+.+||+++|||.+-+...+.. ......+.||+.+.++.. -
T Consensus 9 ~vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~~-------~ 81 (384)
T PRK06158 9 RTAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVDG-------T 81 (384)
T ss_pred CEEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeecc-------c
Confidence 34678877654322 111111 257899999999999999998866432211 113466889997654321 1
Q ss_pred CccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 393 HPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 393 hp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..++++...+.++...++... +++.|+.
T Consensus 82 ~~g~~s~~~al~~A~~~I~sG~--~d~vLV~ 110 (384)
T PRK06158 82 MIGGSSFLAHLLPAALALEAGL--CDVALIC 110 (384)
T ss_pred cCccHHHHHHHHHHHHHHHcCC--CCEEEEe
Confidence 3446667777777777777543 3777763
No 143
>PLN02854 3-ketoacyl-CoA synthase
Probab=93.07 E-value=0.4 Score=51.56 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
-.++.++|+++|++++|||++-++ ..+++...+..++||+.++ .+|.+| .||+|...-+.+..++-
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg--------mGCSggl~aL~lA~~lL 264 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG--------MGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc--------chhhhHHHHHHHHHHHH
Confidence 358899999999999999999874 2355677888999999643 345532 36787777777776666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 265 ~~~ 267 (521)
T PLN02854 265 KAN 267 (521)
T ss_pred HhC
Confidence 543
No 144
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=92.29 E-value=0.19 Score=48.24 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH----HHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa----~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++..-.|.. .....+++.|||.+.
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~ 151 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPD 151 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TT
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCC
Confidence 4788999999999999999999876554 457889999999876
No 145
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=92.00 E-value=0.17 Score=40.87 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=43.9
Q ss_pred HHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHH--HHHccCCCEE
Q 012506 87 IEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAA--AIKAGFYDIG 160 (462)
Q Consensus 87 l~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~--~I~sG~~d~v 160 (462)
|+++|++++|||.++.-+.. ....+.++..+|+|......+ -|.+|++-..++..+.. .|+. -|.+
T Consensus 1 L~~~g~~~~did~~i~hq~~------~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~--Gd~v 72 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS------KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKP--GDRV 72 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS------HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCT--TEEE
T ss_pred CccccCCHHHCCEEEeCCCC------HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCC--CCEE
Confidence 68999999999999985432 234456778899975433222 25567777777766555 3333 3688
Q ss_pred EEEeecC
Q 012506 161 IGAGLES 167 (462)
Q Consensus 161 Lv~G~E~ 167 (462)
+++++-.
T Consensus 73 l~~~~G~ 79 (90)
T PF08541_consen 73 LLVGFGA 79 (90)
T ss_dssp EEEEEET
T ss_pred EEEEEEh
Confidence 8877644
No 146
>PLN03169 chalcone synthase family protein; Provisional
Probab=91.76 E-value=0.6 Score=48.59 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+.-+ ++....+..++||+.+...- .+=+-.||+|...-.....++-+.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~d~~~gC~g~~~aL~~A~~~~~~ 184 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQR------VMLYFLGCSGGVAGLRVAKDIAEN 184 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCccee------eecccChhHHHHHHHHHHHHHHHh
Confidence 47999999999999999998765443 55667788899999764210 122345777766655555555443
No 147
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=91.73 E-value=0.95 Score=47.03 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=58.9
Q ss_pred EEEEEEEEecc---CCCCCCc-cHHHHHHHHHHHcCCCCCCccEEEec---CCCH---HHHHHHHHHcCCCCCCC-CCCC
Q 012506 318 GVFRTFAAVGV---DPAIMGV-GPAVAIPAAVKSAGLQLDDIDLFEIN---EAFA---SQFVYCRNKLGLDPEKI-NVNG 386 (462)
Q Consensus 318 ~~i~g~~~~~~---~p~~~~~-~~~~Ai~~aL~~AGl~~~DID~~eih---dafa---~~~~~~~e~LGl~~~~v-n~~G 386 (462)
+.|+|.+.... .+..... -...|++++|+.|||+++|||.+-+. +.|. .......+.||+.+.+. ++
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~v-- 82 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIRV-- 82 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEEE--
Confidence 35777776543 1111111 12578999999999999999988764 2221 11245668899976442 22
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..+++|...+.++...++.. .+++.|+.
T Consensus 83 ------~~~casg~~al~~A~~~I~sG--~~~~vLVv 111 (386)
T PRK08313 83 ------HTAGSVGGSTAVVAASLVQSG--VYRRVLAV 111 (386)
T ss_pred ------eccCHHHHHHHHHHHHHHHCC--CCCEEEEE
Confidence 223456777777777777643 34777764
No 148
>PLN03168 chalcone synthase; Provisional
Probab=91.08 E-value=0.78 Score=47.72 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCC--CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~--vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++.+.-+ ++.......++||+.+.. +.. .-.||+|..........+-
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d--------~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMM--------YQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeee--------eCCccHHHHHHHHHHHHHH
Confidence 47899999999999999999976533 556678889999997642 222 2246776666555555555
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 178 ~~ 179 (389)
T PLN03168 178 EN 179 (389)
T ss_pred Hh
Confidence 43
No 149
>PRK07855 lipid-transfer protein; Provisional
Probab=91.00 E-value=1.6 Score=45.33 Aligned_cols=95 Identities=17% Similarity=0.129 Sum_probs=60.2
Q ss_pred EEEEEEEEeccCCCCCCcc----HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC-CCC-CCCCCcccc
Q 012506 318 GVFRTFAAVGVDPAIMGVG----PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP-EKI-NVNGGALAI 391 (462)
Q Consensus 318 ~~i~g~~~~~~~p~~~~~~----~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~-~~v-n~~GG~~a~ 391 (462)
+.|+|.+....... .+.. ...|++++|+.|||+++|||.+-++.........+.+.||+.+ +++ ++
T Consensus 6 v~IvG~g~t~~~r~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~v------- 77 (386)
T PRK07855 6 AAIVGIGATEFSKN-SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFSRI------- 77 (386)
T ss_pred EEEEEeeecccccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcceeee-------
Confidence 35777776543221 1112 2578999999999999999977653211111244678899976 332 32
Q ss_pred CCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 392 GHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 392 Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..|+||...+.++...++.. .++..|+.
T Consensus 78 -~~gg~sg~~~~~~A~~~I~sG--~~d~vLv~ 106 (386)
T PRK07855 78 -HYGGGAACATVQQAAMAVATG--VADVVVCY 106 (386)
T ss_pred -cCCcHHHHHHHHHHHHHHHCC--CCCEEEEE
Confidence 345678877788888777764 34777764
No 150
>PLN03173 chalcone synthase; Provisional
Probab=90.90 E-value=0.92 Score=47.23 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++... ..++.......++||+.+.-... +-+-.||+|...-.....++-+.
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~------~~~~~gC~g~~~aL~~A~~~~~~ 180 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRF------MMYQQGCFAGGTVLRLAKDLAEN 180 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceee------ehhcCccHHHHHHHHHHHHHHHh
Confidence 478999999999999999987553 23567788889999997642111 11233677666655555555543
No 151
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=90.51 E-value=2.4 Score=40.54 Aligned_cols=92 Identities=12% Similarity=0.027 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc-----------c------------ccHHHHHHHHcCCCCCcc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-----------R------------ASECRMAAFYAGFPETVP 130 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~-----------~------------~~~a~~~a~~~Glp~~~p 130 (462)
....|+.+++.+++++. .++|.+|+++..++... . ...+.+++...+. +.+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 35667777777777442 57789999987766420 0 0134566666777 679
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~ 172 (462)
..++..+-.|...|+..|+..++.| .+-||++.+|.....+
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~ 147 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEP 147 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChh
Confidence 9999999999999999999999999 8999999999876543
No 152
>PLN03170 chalcone synthase; Provisional
Probab=90.50 E-value=0.82 Score=47.78 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+-- .+.....+..++||+.+...- .+-+-.||+|...-.....++-+.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r------~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR------LMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH------HHhhcChhHHHHHHHHHHHHHHHc
Confidence 4789999999999999999865422 366778889999999764210 122345777777766666666554
Q ss_pred C
Q 012506 414 G 414 (462)
Q Consensus 414 ~ 414 (462)
+
T Consensus 185 ~ 185 (401)
T PLN03170 185 N 185 (401)
T ss_pred C
Confidence 3
No 153
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.38 E-value=0.94 Score=45.02 Aligned_cols=68 Identities=24% Similarity=0.316 Sum_probs=54.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH----HHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa----~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+.+++|+.+++.++|||.+..-.+.. +.....+.+|||.|. ++.++| +|=..|++|++...+-++.
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~y~ra 154 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARDYCRA 154 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHHHHhh
Confidence 4788999999999999999998765433 456788899999875 677776 7777888888877777654
No 154
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=90.36 E-value=1.3 Score=46.04 Aligned_cols=96 Identities=19% Similarity=0.046 Sum_probs=60.7
Q ss_pred EEEEEEEEeccCCC--CCCcc-HHHHHHHHHHHcCCCCCCccEEEec---CCC---HHHHHHHHHHcCCCCCCC-CCCCC
Q 012506 318 GVFRTFAAVGVDPA--IMGVG-PAVAIPAAVKSAGLQLDDIDLFEIN---EAF---ASQFVYCRNKLGLDPEKI-NVNGG 387 (462)
Q Consensus 318 ~~i~g~~~~~~~p~--~~~~~-~~~Ai~~aL~~AGl~~~DID~~eih---daf---a~~~~~~~e~LGl~~~~v-n~~GG 387 (462)
+.|+|.+....... ..... ...|++++|+.+||+++|||.+-+. +.+ .....+..+.||+.+.+. ++
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~V--- 87 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSRV--- 87 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEEE---
Confidence 35777776543221 11111 2579999999999999999988664 222 113345667888865443 22
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 388 ~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..++||...+..+...++...- +..|+.
T Consensus 88 -----~~~gasG~~al~~A~~~I~sG~a--d~vLVv 116 (392)
T PRK06065 88 -----YVGGATGVMTAIAGWYHVASGLC--QKVLAV 116 (392)
T ss_pred -----ecCchhHHHHHHHHHHHHhCCCC--CEEEEE
Confidence 23478888888888887776433 677763
No 155
>PLN03171 chalcone synthase-like protein; Provisional
Probab=90.23 E-value=1.2 Score=46.40 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe----cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEI----NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~ei----hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-. .+.++....+..++||+.+..--. .+ .-.||+|...-......+-..
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~-----~~-~~~gC~g~~~aL~~A~~li~~ 186 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRT-----ML-HLNGCFAGAAALRLAKDLAEN 186 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCccccee-----ec-cCCccHHHHHHHHHHHHHHHh
Confidence 47899999999999999999976 244677788889999997542101 01 122788877777766666554
No 156
>PLN00415 3-ketoacyl-CoA synthase
Probab=90.16 E-value=0.85 Score=48.31 Aligned_cols=68 Identities=18% Similarity=0.311 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ ..+++...+..++||+.+. .++.+| +||+|...-+....++-
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~g--------mGCsggv~aL~lA~~ll 210 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG--------MGCSAGAISVDLATNLL 210 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEecc--------ccchHHHHHHHHHHHHH
Confidence 458899999999999999987654 2345667788899999743 345533 35665555555555555
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 211 ~a 212 (466)
T PLN00415 211 KA 212 (466)
T ss_pred Hh
Confidence 43
No 157
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=89.83 E-value=2.3 Score=44.84 Aligned_cols=77 Identities=23% Similarity=0.192 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC---CCH---HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE---AFA---SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd---afa---~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|+..+|+++||+++|||.+-... .+. ....+..+.||+.+.+.... +-.++||+..+..+...++
T Consensus 42 ~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v-------~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 42 KKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKRI-------EGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEEE-------eCCcHHHHHHHHHHHHHHH
Confidence 4688999999999999999875532 221 12234568899976543221 2357888888888888887
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
.... +..|+.
T Consensus 115 sG~~--~~vLv~ 124 (430)
T PRK06365 115 SGRM--DCVAVY 124 (430)
T ss_pred cCCC--CEEEEE
Confidence 6433 666653
No 158
>PRK12404 stage V sporulation protein AD; Provisional
Probab=89.16 E-value=1.5 Score=44.24 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~ 379 (462)
..|+++||+++||+++|||++-..+ .++.. +..+.||++.
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP~ 102 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIPY 102 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCCc
Confidence 5799999999999999999999854 44443 7778999654
No 159
>PLN03172 chalcone synthase family protein; Provisional
Probab=89.16 E-value=1.6 Score=45.59 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCCC--CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~~--vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++.+. ..++....+..++||+.+.- +.. +-.||+|...-.....++-
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~--------~~~gC~g~~~aL~~A~~~~ 178 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMM--------YQQGCFAGGTVLRLAKDLA 178 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEee--------eCCchHHHHHHHHHHHHHH
Confidence 478999999999999999987543 34667788899999997642 222 2235666555444444444
Q ss_pred h
Q 012506 412 R 412 (462)
Q Consensus 412 ~ 412 (462)
+
T Consensus 179 ~ 179 (393)
T PLN03172 179 E 179 (393)
T ss_pred H
Confidence 3
No 160
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.76 E-value=1.5 Score=45.44 Aligned_cols=82 Identities=16% Similarity=0.078 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHc-----CCCCCcceEEe----cCCCchHHHHHHHHH
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA-----GFPETVPVRTV----NRQCSSGLQAVADVA 149 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~-----Glp~~~p~~~v----~~~CsSgl~Ai~~Aa 149 (462)
...+++++|+++|+.++|||.++.=+.. ...-..++..+ |+|...-..++ |++|+|-..++..+.
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~n------~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYSS------EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCccc------HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 3677888999999999999988863332 22334555554 88754333333 556666666776553
Q ss_pred H--HHHccCCCEEEEEeecCC
Q 012506 150 A--AIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 150 ~--~I~sG~~d~vLv~G~E~m 168 (462)
. .|+.| |.+++.+.|+-
T Consensus 348 ~~g~~~~G--d~vl~~~~~s~ 366 (378)
T PRK06816 348 NSGRLKPG--QKILCFVPESG 366 (378)
T ss_pred HcCCCCCC--CEEEEEEeccc
Confidence 3 23333 77888887773
No 161
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=88.41 E-value=3 Score=43.41 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=60.6
Q ss_pred EEEEEEEEeccC--CCCCCcc-HHHHHHHHHHHcCCCCCCccEEEecCCCHH-HHHHHHHHcCCCCCCCCCCCCccccCC
Q 012506 318 GVFRTFAAVGVD--PAIMGVG-PAVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKINVNGGALAIGH 393 (462)
Q Consensus 318 ~~i~g~~~~~~~--p~~~~~~-~~~Ai~~aL~~AGl~~~DID~~eihdafa~-~~~~~~e~LGl~~~~vn~~GG~~a~Gh 393 (462)
+.|+|.+.+... ++..... ...|+.++|+.|||+++|||.+-.+..... ......+.||+.+.++.. .+
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~~-------v~ 79 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVDS-------TE 79 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeecc-------cc
Confidence 467777765422 2211111 257899999999999999998754211111 113467899997644322 24
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 394 PLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
..|++|...+.++...++... ++..|+.
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~--~d~vLvv 107 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGK--CSVALIT 107 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCC--CCEEEEE
Confidence 457888777888888887643 3677763
No 162
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.25 E-value=2 Score=43.19 Aligned_cols=70 Identities=21% Similarity=0.151 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-.... .+....+..+.||+.+.... ++..-.+|+|.........++-.
T Consensus 57 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~------~~~v~~~C~~~~~al~~a~~~l~ 130 (329)
T PRK07204 57 AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIP------CFDINSTCLSFITALDTISYAIE 130 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCce------EEEccchhHHHHHHHHHHHHHHH
Confidence 46899999999999999998865421 24445667788999753111 12222356655554444444443
Q ss_pred c
Q 012506 413 R 413 (462)
Q Consensus 413 ~ 413 (462)
.
T Consensus 131 ~ 131 (329)
T PRK07204 131 C 131 (329)
T ss_pred C
Confidence 3
No 163
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.02 E-value=1.7 Score=44.50 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++|++++|||++...-+ .+....+..++||+.+. .+.++ .||+|...-.....++
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~---------~~C~g~~~aL~~A~~~ 135 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG---------QACAGYLYGLFVAHSL 135 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh---------hhhHHHHHHHHHHHHH
Confidence 57999999999999999999987543 44667888899999643 22332 2566666655555555
Q ss_pred HhcC
Q 012506 411 KRRG 414 (462)
Q Consensus 411 ~~~~ 414 (462)
-+.+
T Consensus 136 i~~~ 139 (353)
T PRK12880 136 IQSG 139 (353)
T ss_pred HHcC
Confidence 5543
No 164
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=87.74 E-value=2.4 Score=42.67 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-...+ ......+..++||+.+.. ++.-..+|+|...-......+-
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--------~~di~~~C~g~~~aL~~A~~~l 127 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--------AIDLAGACAGFLYALVLADGFV 127 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--------eeeccchhhHHHHHHHHHHHHH
Confidence 57999999999999999999976322 234556788999996432 1122235666655444444443
No 165
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=87.47 E-value=2.7 Score=43.56 Aligned_cols=76 Identities=17% Similarity=0.173 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCCC-CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPEK-INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++||+++|||.+-+-.... .......+.||+...+ +.+ +...++|+..+..+...++
T Consensus 26 ~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v--------~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 26 WESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRV--------EAMCATGLAASLTAYTAVA 97 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEE--------eccCHHHHHHHHHHHHHHH
Confidence 5799999999999999999887543221 1134566889997543 233 2345777777888888877
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... +++.|+.
T Consensus 98 sG~--~~~vLvv 107 (385)
T PRK12578 98 SGL--VDMAIAV 107 (385)
T ss_pred CCC--CCEEEEE
Confidence 543 3777764
No 166
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=87.43 E-value=1.6 Score=37.22 Aligned_cols=101 Identities=20% Similarity=0.237 Sum_probs=56.2
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC---Cc
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE---TV 129 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~---~~ 129 (462)
+|.|.+-+--+. ........+...+ .++++++|+++++++++||.|..--. +...........+...++-.. .+
T Consensus 3 ~i~g~~~~~dg~-~~~~~~~p~~~~~-~~~i~~al~~agi~~~~I~~i~~hg~-Gt~~~D~~E~~ai~~~~~~~~~~~~~ 79 (119)
T PF02801_consen 3 VIRGYGVNSDGA-RSSSLTAPNGAAL-ARAIRRALADAGISPEDIDYIEAHGT-GTPLGDAAEAEAIARVFGDSARQQPV 79 (119)
T ss_dssp EEEEEEEEE-SS-STSSSSSTTHHHH-HHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTS
T ss_pred EEEEEEEECCCC-CCCCCcCcCHHHH-HHHHHHHHhhhccccccceeeeeecc-ccccchhhhhhhhhhhhccccccccc
Confidence 566666554331 1122233344444 78899999999999999998875221 111102334444555444311 13
Q ss_pred ceEEe-----cCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRTV-----NRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~v-----~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
|+..+ ...++||+..+..+...++.|.
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCC
Confidence 43332 3467899999999999988874
No 167
>PRK06840 hypothetical protein; Validated
Probab=87.34 E-value=2.5 Score=42.80 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe-cCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEI-NEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~ei-hda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-. +.. +.....++.+.||+..
T Consensus 58 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~ 105 (339)
T PRK06840 58 IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKN 105 (339)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCC
Confidence 57999999999999999998753 221 2233456778899964
No 168
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=87.04 E-value=2.3 Score=43.03 Aligned_cols=70 Identities=26% Similarity=0.358 Sum_probs=54.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|+++||+.||++++|||++-+- ..|+++.-...+.||+..-+ +|==...|+|...-.....++-+
T Consensus 57 ~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--------afDl~aaCsgf~yaL~~A~~~i~ 128 (323)
T COG0332 57 VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--------AFDLQAACSGFLYALSVADGLIR 128 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--------eeechhhhHHHHHHHHHHHHHHH
Confidence 479999999999999999999863 45788888888999996521 12223468888888888888777
Q ss_pred cCC
Q 012506 413 RGR 415 (462)
Q Consensus 413 ~~~ 415 (462)
.+.
T Consensus 129 sG~ 131 (323)
T COG0332 129 SGG 131 (323)
T ss_pred cCC
Confidence 653
No 169
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=86.51 E-value=3.3 Score=37.21 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHHHHhcCC
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHEMKRRGR 415 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~qL~~~~~ 415 (462)
....+..+|++.|++..|+++|-+|=.-........+.|||+++++-.+=-. -.+||...+|=..-+-++..+-..++.
T Consensus 42 i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~ 121 (151)
T PF02797_consen 42 IPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGA 121 (151)
T ss_dssp HHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcc
Confidence 3467788999999998788899999999988888889999998865443222 238898888855544444432221221
Q ss_pred -----CCcEEEEEeecccceeE-EEEEEe
Q 012506 416 -----DCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
+.++++... .|-|+.+ .++|.+
T Consensus 122 ~~~~~g~~~gv~~a-fGPG~t~E~~lLr~ 149 (151)
T PF02797_consen 122 PPPGEGGEWGVMLA-FGPGLTIEGMLLRS 149 (151)
T ss_dssp SBTTTTBSEEEEEE-EETTTEEEEEEEEE
T ss_pred cCCCCCCCeEEEEE-ECCcceEeeEEEee
Confidence 236888765 6777776 445543
No 170
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=86.36 E-value=1.7 Score=44.40 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE------EecCCCchHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR------TVNRQCSSGLQAVADV 148 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~------~v~~~CsSgl~Ai~~A 148 (462)
....+..+++++|+++|++++|||.+++=+.. ...-..+...+|+|...-.. .-|.+++|-..++..+
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~------~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~ 279 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN------GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV 279 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC------hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence 44555688899999999999999988873221 22344578889997432221 2366677877888877
Q ss_pred HHHHHccCCCEEEEEeecC
Q 012506 149 AAAIKAGFYDIGIGAGLES 167 (462)
Q Consensus 149 a~~I~sG~~d~vLv~G~E~ 167 (462)
...++.| |.++.+|+=.
T Consensus 280 ~~~~~~G--d~vll~~~G~ 296 (345)
T TIGR00748 280 LDIAEPG--DRILAVSYGS 296 (345)
T ss_pred HHhcCCC--CEEEEEEecC
Confidence 7777777 5777777644
No 171
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=85.77 E-value=2.7 Score=43.60 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-C-CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-E-KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ........+.||+.+ . ..+++ ..+++|+..+..+...+
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~--------~~c~s~~~al~~A~~~I 98 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN--------RVCGSGLQAVALAAQSI 98 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc--------cccHHHHHHHHHHHHHH
Confidence 479999999999999999988653221 222334667899975 2 23332 23455666666666666
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.. .++..|+
T Consensus 99 ~sG--~~~~vLv 108 (386)
T cd00751 99 AAG--EADVVVA 108 (386)
T ss_pred HCC--CCCeEEE
Confidence 543 3367775
No 172
>PRK08304 stage V sporulation protein AD; Validated
Probab=85.75 E-value=2.5 Score=42.80 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--HHHHHHHHHHcCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGL 377 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf--a~~~~~~~e~LGl 377 (462)
..|+++||+++||+++|||++-.-+.. .+...+..+.||+
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGI 102 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGI 102 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCC
Confidence 579999999999999999999775432 2234456688887
No 173
>PRK04262 hypothetical protein; Provisional
Probab=85.63 E-value=2.3 Score=43.36 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+. .....++.+.||+.+
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~ 102 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATP 102 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCC
Confidence 479999999999999999998653221 123445668899965
No 174
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.35 E-value=3.8 Score=41.33 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-.... ......++.+.||+++
T Consensus 66 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~ 112 (338)
T PRK09258 66 IAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPK 112 (338)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCC
Confidence 57999999999999999999876432 2344566778999975
No 175
>PRK06059 lipid-transfer protein; Provisional
Probab=85.06 E-value=3.6 Score=42.89 Aligned_cols=77 Identities=17% Similarity=0.240 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CC--HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AF--ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----af--a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++||+++|||.+-... .+ ........+.||+.+.+... + +...+||...+..+...++
T Consensus 28 ~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~------v-~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 28 VVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS------S-YAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec------c-cchhHHHHHHHHHHHHHHH
Confidence 5789999999999999999886421 11 12234566889996543321 1 3345666777777777777
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... +++.|+.
T Consensus 101 sG~--~~~vLvv 110 (399)
T PRK06059 101 AGL--CDVALVV 110 (399)
T ss_pred CCC--CCEEEEE
Confidence 543 3677764
No 176
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=85.04 E-value=2.9 Score=42.21 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--HHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf--a~~~~~~~e~LGl~ 378 (462)
..|+++||+++||+++|||++-.-+.. .....+..+.||++
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP 97 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIP 97 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCC
Confidence 579999999999999999999775532 12344667889973
No 177
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=85.03 E-value=7.2 Score=42.01 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=61.1
Q ss_pred EEEEEEEeccCCCCCC--ccH----HHHHHHHHHHcCCC--CCCccEEEecCCCH----HHHHHHHHHcCCCCCCCCCCC
Q 012506 319 VFRTFAAVGVDPAIMG--VGP----AVAIPAAVKSAGLQ--LDDIDLFEINEAFA----SQFVYCRNKLGLDPEKINVNG 386 (462)
Q Consensus 319 ~i~g~~~~~~~p~~~~--~~~----~~Ai~~aL~~AGl~--~~DID~~eihdafa----~~~~~~~e~LGl~~~~vn~~G 386 (462)
.|+|.+.....+.... ..+ ..|++++|+.+|++ ++|||-+-+-..+. .....+.+.||+.+.+. ..
T Consensus 7 ~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~-~~- 84 (498)
T PRK08257 7 VIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPART-VY- 84 (498)
T ss_pred EEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcce-eE-
Confidence 5778877543221111 122 57899999999999 99999776532221 12355778999965432 21
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
.+..|+++...+.++...+.... ++..|+
T Consensus 85 -----~~~GG~s~~~~v~~Aa~~IasG~--advVLv 113 (498)
T PRK08257 85 -----SPVGGNSPQRLVNEAALRIAAGE--ADVALV 113 (498)
T ss_pred -----ecCCCHHHHHHHHHHHHHHHCCC--CCEEEE
Confidence 34567888888888888887643 367766
No 178
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=84.86 E-value=3.7 Score=41.96 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=71.5
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHc---CCCC
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA---GFPE 127 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~---Glp~ 127 (462)
.-+=+|-+++.++-- -...+.-.|...++.+++++.+|+++.|..+-||+-+-.-- .-..-..+...+ |= .
T Consensus 40 gKytIGLGq~~Mgfc----sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK-SKSVKt~LMqLF~~sgN-t 113 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGFC----SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-T 113 (462)
T ss_pred cceEeccCcceeccc----CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc-chHHHHHHHHHhhhcCC-C
Confidence 346688888877532 12335678888999999999999999999999997643211 011112222333 44 4
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccC
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.+..++..++|=+|..|+-.|.+-|++-.
T Consensus 114 dIEGiDttnACYGGtaALfnavnWiESss 142 (462)
T KOG1393|consen 114 DIEGIDTTNACYGGTAALFNAVNWIESSS 142 (462)
T ss_pred ccccccccccccccHHHHHHHhhhhhhcc
Confidence 57778888999999999999999999854
No 179
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=84.23 E-value=9.9 Score=37.91 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC---CC-CcceEEecCCCchHHHHHHHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF---PE-TVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl---p~-~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+....+++++|++++++++|||.++.-....... ............+. +. ......-|..++|+...+..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG-DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC-CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 45567899999999999999999988755433222 11122222222332 10 111122356677888888888888
Q ss_pred HHcc
Q 012506 152 IKAG 155 (462)
Q Consensus 152 I~sG 155 (462)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 7777
No 180
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=83.15 E-value=8.2 Score=38.43 Aligned_cols=41 Identities=32% Similarity=0.380 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~ 378 (462)
..|++++|+++|++++|||.+-.-.. +.....+..+.||+.
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~ 98 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT 98 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC
Confidence 57899999999999999999975322 233455677889996
No 181
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=83.00 E-value=5.2 Score=39.91 Aligned_cols=42 Identities=31% Similarity=0.442 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-.... +.....+..+.||+..
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~ 102 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG 102 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC
Confidence 57999999999999999998866432 3444566778899975
No 182
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=82.77 E-value=4.4 Score=42.11 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC---CH--HHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA---FA--SQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda---fa--~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+... +. .......+.+|++. .| .+++ ..++||+..+..+...+
T Consensus 31 ~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~--------~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 31 GAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN--------VVCASGMLAVESAAREI 102 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee--------chhhHHHHHHHHHHHHH
Confidence 57999999999999999998876321 11 11334568899975 22 2332 35788888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.... ++.|+
T Consensus 103 ~sG~~--d~vla 112 (388)
T PRK06366 103 MLGER--DLVIA 112 (388)
T ss_pred hcCCC--CEEEE
Confidence 76433 67664
No 183
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=82.76 E-value=3.7 Score=42.83 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++||+++|||.+-+-..+ ........+.+|+++.+... + +-.++||+..+..+...++-
T Consensus 32 ~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~~------v-~~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 32 VEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTR------V-ENFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEEE------E-ecccHHHHHHHHHHHHHHHC
Confidence 579999999999999999977552211 11124466789997533221 1 33468888888888888876
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
... ++.|+.
T Consensus 105 G~~--d~vlv~ 113 (398)
T PRK06157 105 GAY--DIALAL 113 (398)
T ss_pred CCC--CEEEEE
Confidence 533 666653
No 184
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=82.47 E-value=4 Score=42.96 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ........+.+|++. +.++++. .++||+..+..+...+
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~--------~CaSg~~al~~A~~~I 103 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR--------NCASGMQALDSAAANI 103 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc--------hhhHHHHHHHHHHHHH
Confidence 579999999999999999987664322 122345667899964 2334432 2677777777777777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+... +++.|+
T Consensus 104 ~sG~--~d~vLv 113 (426)
T PRK08170 104 ALGR--ADLVLA 113 (426)
T ss_pred HCCC--CCEEEE
Confidence 7533 366665
No 185
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=82.18 E-value=4.7 Score=41.35 Aligned_cols=77 Identities=22% Similarity=0.214 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++||+++|||.+-+...+. .......+.||++..+... . +-.++||+..+..+...++.
T Consensus 21 ~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~~~~------v-~~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 21 AEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATR------V-EAAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcceee------E-eCccHHHHHHHHHHHHHHHh
Confidence 4789999999999999999887643322 2345567889996333211 1 22356666666666666664
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. +++.|+.
T Consensus 94 G~--~~~vlv~ 102 (375)
T cd00829 94 GL--ADVVLVV 102 (375)
T ss_pred CC--CCEEEEE
Confidence 33 3677654
No 186
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=81.75 E-value=4.5 Score=42.00 Aligned_cols=75 Identities=16% Similarity=0.100 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ..........+|+.. .+ ++++ ..+++|+..+..+...+
T Consensus 26 ~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~--------~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 26 AAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN--------RQCASGLQAVILAAQLI 97 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec--------chhhHHHHHHHHHHHHH
Confidence 579999999999999999998753221 222344567789874 22 2332 23456666666666666
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.. .+++.|+
T Consensus 98 ~sG--~~~~vLv 107 (386)
T TIGR01930 98 RAG--EADVVVA 107 (386)
T ss_pred HCC--CCCEEEE
Confidence 643 3367775
No 187
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.43 E-value=5.6 Score=40.93 Aligned_cols=41 Identities=24% Similarity=0.393 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~ 378 (462)
..|++++|+++|++++|||.+-+. ..+........+.||+.
T Consensus 100 ~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~ 145 (372)
T PRK07515 100 VAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE 145 (372)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC
Confidence 468899999999999999988653 23344456677889985
No 188
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.19 E-value=5.9 Score=39.61 Aligned_cols=42 Identities=31% Similarity=0.447 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+ +......+.+.||+.+
T Consensus 58 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~ 104 (325)
T PRK12879 58 IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN 104 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC
Confidence 57999999999999999998865432 2344566778899864
No 189
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=81.15 E-value=10 Score=39.42 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=56.9
Q ss_pred EEEEEEEEeccCC---CCCCc-cHHHHHHHHHHHcC-CCC-CCccEEEec--CCCH---HHHHHHHHHcCCCCCCCCCCC
Q 012506 318 GVFRTFAAVGVDP---AIMGV-GPAVAIPAAVKSAG-LQL-DDIDLFEIN--EAFA---SQFVYCRNKLGLDPEKINVNG 386 (462)
Q Consensus 318 ~~i~g~~~~~~~p---~~~~~-~~~~Ai~~aL~~AG-l~~-~DID~~eih--dafa---~~~~~~~e~LGl~~~~vn~~G 386 (462)
+.|+|.+.+.... +.... -...|+.++|+.|| |++ +|||.+-+. +.|. .......+.||+...+.-.
T Consensus 6 vaIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~-- 83 (385)
T PRK06066 6 VAIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMT-- 83 (385)
T ss_pred EEEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEE--
Confidence 3577877664332 21111 12579999999999 997 799977553 2221 1123355788885433211
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
. +++|...+..+...++... ++..|+.
T Consensus 84 ----v----~~sg~~a~~~A~~aV~sG~--~d~vLv~ 110 (385)
T PRK06066 84 ----V----AGDGLQGLAHAVMHINSGL--ANVVVVE 110 (385)
T ss_pred ----E----eCcHHHHHHHHHHHHHcCC--CCEEEEE
Confidence 1 5677777778888777643 3677754
No 190
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=80.80 E-value=6.3 Score=37.64 Aligned_cols=80 Identities=14% Similarity=0.083 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
...+.+...+.++|.+++++.+|+|.|+|+.-.+.+. |--.+-.++..+.+..+.|.+.| |.+.++... .+
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFT-GlRIG~~~AkgLA~~l~iplvgv-----ssL~~~A~~---~~ 106 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFT-GLRIGVAFAKGLALALNIPLVGV-----SSLEALAQG---GA 106 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCccc-chhhHHHHHHHHHHHcCCCEEEe-----CHHHHHHHh---hh
Confidence 4678889999999999999999999999987655544 43333333332222224588887 345554433 45
Q ss_pred ccCCCEEEE
Q 012506 154 AGFYDIGIG 162 (462)
Q Consensus 154 sG~~d~vLv 162 (462)
......+++
T Consensus 107 ~~~~~~v~v 115 (220)
T COG1214 107 EKNAGFVLV 115 (220)
T ss_pred ccCCCceEE
Confidence 545555555
No 191
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=80.61 E-value=8 Score=39.54 Aligned_cols=42 Identities=36% Similarity=0.438 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+. .....++.++||+.+
T Consensus 90 ~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~ 135 (361)
T cd00831 90 EEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRP 135 (361)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCc
Confidence 479999999999999999998764322 234457778999975
No 192
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=80.33 E-value=12 Score=38.92 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=60.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
..+.|.|.+.+--... ....+... +-...++++||+++|++++|||.+.. |+.+... .....+.+...+|- .
T Consensus 236 ~~~~I~g~g~~~d~~~--~~~~~~~~-~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~--D~~E~~al~~~f~~--~ 308 (392)
T PRK09185 236 AAVALLGVGESSDAHH--MSAPHPEG-LGAILAMQQALADAGLAPADIGYINLHGTATPLN--DAMESRAVAAVFGD--G 308 (392)
T ss_pred CcEEEEEEEEeCCCCC--CCCCCCCH-HHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC--CHHHHHHHHHHhCC--C
Confidence 4578888877532221 11122222 23357899999999999999998764 3322222 23455556656653 2
Q ss_pred cceE-----EecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVR-----TVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~-----~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.|+. .-+..+++|...+..++..++.|.
T Consensus 309 ~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 309 VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred CceeCCCcccccChhhcchHHHHHHHHHHhcCC
Confidence 3332 234567788888888888888774
No 193
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=79.70 E-value=5.4 Score=41.69 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+-..+ ..........+|+++ .| +++ +-..+||+..+..+...+
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V--------~~~CaSg~~Al~~A~~~I 102 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQL--------DRRCGSGLQAVITAAMQV 102 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeeh--------hhhhhHHHHHHHHHHHHH
Confidence 579999999999999999988643221 222334567789874 22 222 234577777788887777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+... +++.|+
T Consensus 103 ~sG~--~d~vLv 112 (404)
T PRK06205 103 QTGA--ADVVIA 112 (404)
T ss_pred HcCC--CCEEEE
Confidence 7543 367666
No 194
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=79.58 E-value=7.7 Score=38.57 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----C-CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----A-FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----a-fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-.-. . +........+.||+..
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~ 101 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKN 101 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 5789999999999999999885522 1 2344566778899963
No 195
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=78.93 E-value=5.8 Score=41.43 Aligned_cols=77 Identities=13% Similarity=0.009 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCC-CcceEEecCCCchHHHHHHHHHHHHHc
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~-~~p~~~v~~~CsSgl~Ai~~Aa~~I~s 154 (462)
+-+.+++++||+++|+ +++||.|.. |+-++.. .....+.+...++.|- .+..+.-...+++|..-+..+...|+.
T Consensus 280 ~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~--D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~ 356 (398)
T PRK06519 280 GDLEASLERLLKPAGG-LAAPTAVISGATGAHPA--TAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSK 356 (398)
T ss_pred HHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc--cHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhc
Confidence 3457899999999999 799998764 2222221 2345666666677642 233333455677888888888888888
Q ss_pred cC
Q 012506 155 GF 156 (462)
Q Consensus 155 G~ 156 (462)
|.
T Consensus 357 g~ 358 (398)
T PRK06519 357 GA 358 (398)
T ss_pred Cc
Confidence 85
No 196
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.82 E-value=8.8 Score=38.28 Aligned_cols=67 Identities=19% Similarity=0.277 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCC-CCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKI-NVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||.+-+... +......+.+.||+...+. +++ ...++|+..+..+...++
T Consensus 57 ~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~~~~v~--------~~Casg~~al~~A~~~i~ 128 (319)
T PRK09352 57 TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAAAFDLS--------AACSGFVYALSTADQFIR 128 (319)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCcEeecc--------ccchhHHHHHHHHHHHHH
Confidence 46899999999999999998866322 2334456778899954332 221 123455555555655555
Q ss_pred h
Q 012506 412 R 412 (462)
Q Consensus 412 ~ 412 (462)
.
T Consensus 129 ~ 129 (319)
T PRK09352 129 S 129 (319)
T ss_pred c
Confidence 3
No 197
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=78.78 E-value=6.6 Score=40.68 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-------HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-------ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-------a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+-..+ ........+.||+...+.... +...+||...+..+...+
T Consensus 27 ~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~~~~v-------~~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 27 VEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPATRV-------EAACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCCeeEE-------eCCcHHHHHHHHHHHHHH
Confidence 578899999999999999988763221 223445667889864332211 123466777777777777
Q ss_pred HhcCCCCcEEEEE
Q 012506 411 KRRGRDCRFGVIS 423 (462)
Q Consensus 411 ~~~~~~~~~gl~~ 423 (462)
+.. .+++.|+.
T Consensus 100 ~sG--~~~~vLv~ 110 (389)
T PRK06064 100 ASG--EADVVLAA 110 (389)
T ss_pred HCC--CCCEEEEE
Confidence 643 33666653
No 198
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=78.76 E-value=12 Score=38.80 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++ +++|||.+.+- +.+.....+..+.||+.+
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~ 98 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQP 98 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCC
Confidence 46899999998 89999999764 333566778889999865
No 199
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=78.21 E-value=6.8 Score=40.82 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+-..+. .....+...+|++. .| +++ +-..+||+..+..+...+
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V--------~~~CaSg~~Al~~A~~~I 102 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETV--------NKVCASGLRAVTLADQII 102 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeeh--------hhhhhHHHHHHHHHHHHH
Confidence 5799999999999999999887643321 12223467789863 32 222 223466777777777777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.... ++.|+
T Consensus 103 ~sG~~--d~vLv 112 (393)
T PRK08235 103 RAGDA--SVIVA 112 (393)
T ss_pred HCCCC--CEEEE
Confidence 74333 66666
No 200
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=77.92 E-value=7.6 Score=40.62 Aligned_cols=76 Identities=17% Similarity=0.108 Sum_probs=51.1
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCC----C--HHHHHHHHHHcCCCCCC-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSA-GLQLDDIDLFEINEA----F--ASQFVYCRNKLGLDPEK-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~A-Gl~~~DID~~eihda----f--a~~~~~~~e~LGl~~~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++ ||+++|||.+.+-.. + ......+.+.+|+.+.| +++ +-.++||...+..+...
T Consensus 32 ~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~~v--------~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 32 AQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGTTV--------NRYCSSSLQTTRMAFHA 103 (406)
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCeeee--------eccchhHHHHHHHHHHH
Confidence 47999999996 999999998754211 1 11224567889995432 222 33478888888888888
Q ss_pred HHhcCCCCcEEEEE
Q 012506 410 MKRRGRDCRFGVIS 423 (462)
Q Consensus 410 L~~~~~~~~~gl~~ 423 (462)
++-... ++.|+.
T Consensus 104 I~sG~~--d~vLv~ 115 (406)
T PRK07851 104 IKAGEG--DVFISA 115 (406)
T ss_pred HHCCCC--CEEEEe
Confidence 876543 677753
No 201
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=76.71 E-value=14 Score=38.60 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=57.1
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
.|.|.+.+--+.. ...+ .+=...++++||+++|+++++||.|.. |+-+... .......+...+|- ...|+
T Consensus 252 ~i~g~~~~~d~~~-----~~~~-~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~--D~~E~~al~~~fg~-~~~pv 322 (399)
T cd00832 252 EIAGYAATFDPPP-----GSGR-PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL--DRAEAAALAAVFGP-RGVPV 322 (399)
T ss_pred EEEeEEEcCCCCC-----CCCC-HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC--CHHHHHHHHHHhCC-CCCce
Confidence 5777775433321 1112 444578899999999999999998764 2222221 23455555556664 23344
Q ss_pred EE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 132 RT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 132 ~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.. -...+++|...+..+..+|+.|.
T Consensus 323 ~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ 352 (399)
T cd00832 323 TAPKTMTGRLYAGGAPLDVATALLALRDGV 352 (399)
T ss_pred eCCCchhcchHHHHHHHHHHHHHHHHhCCC
Confidence 32 23346677777777777888764
No 202
>PRK08256 lipid-transfer protein; Provisional
Probab=76.48 E-value=6.3 Score=40.94 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCCC-CCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK-INVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++||+++|||.+.+. +.+.. ....+.+|+...+ +++ +..++||...+..+...++.
T Consensus 27 ~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~--~~~~~~lGl~~~~~~~v--------~~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 27 AEAGRAALADAGIDYDAVQQAYVGYVYGDSTSG--QRALYEVGMTGIPIVNV--------NNNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHcCCChHHCCeeEEEEEeCCcchh--HHHHHHcCCCCCCCccc--------ccccHHHHHHHHHHHHHHHC
Confidence 578999999999999999976542 22222 2345678885422 222 33467788788888877775
Q ss_pred cCCCCcEEEE
Q 012506 413 RGRDCRFGVI 422 (462)
Q Consensus 413 ~~~~~~~gl~ 422 (462)
.. +++.|+
T Consensus 97 G~--~d~vLv 104 (391)
T PRK08256 97 GA--ADCALA 104 (391)
T ss_pred CC--CCEEEE
Confidence 43 367765
No 203
>PRK09051 beta-ketothiolase; Provisional
Probab=76.45 E-value=9.1 Score=39.88 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..|++++|+++||+++|||.+-+-.++. .......+.+|+++ .| +++ +-..+||+..+..+...
T Consensus 32 ~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V--------~~aCaSg~~Al~~A~~~ 103 (394)
T PRK09051 32 ATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNV--------NRLCGSGLQAIVSAAQA 103 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEe--------cccchHHHHHHHHHHHH
Confidence 5799999999999999999886642221 12334556779864 33 233 22346677777777777
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++... .++.|+
T Consensus 104 I~sG~--~d~vLv 114 (394)
T PRK09051 104 ILLGD--ADVAIG 114 (394)
T ss_pred HHcCC--CCEEEE
Confidence 76433 367776
No 204
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=76.17 E-value=8.8 Score=39.99 Aligned_cols=75 Identities=8% Similarity=0.073 Sum_probs=52.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCC-CCC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDP-EKI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~-~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+=..+. .........+|++. .|. ++ +-..+||+..+..+.+.+
T Consensus 32 ~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V--------~~~CaSG~~Ai~~A~~~I 103 (392)
T PRK06633 32 AHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTI--------NKVCGSGLKSVALAANSI 103 (392)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhh--------cchhHHHHHHHHHHHHHH
Confidence 5789999999999999999887643321 12234557889974 333 23 345688888898888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+-... ++.|+
T Consensus 104 ~sG~~--dvvla 113 (392)
T PRK06633 104 MTGDN--EIVIA 113 (392)
T ss_pred HcCCC--CEEEE
Confidence 76543 55555
No 205
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=75.83 E-value=8.6 Score=40.01 Aligned_cols=75 Identities=12% Similarity=0.150 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+-.. .........+.+|++. .| +++ +-..++|+..+..+...+
T Consensus 31 ~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V--------~~~Casg~~ai~~A~~~I 102 (393)
T PRK05656 31 AAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTL--------NKVCGSGLKALHLAAQAI 102 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEe--------cccchhHHHHHHHHHHHH
Confidence 57999999999999999998876221 1122344567899875 22 233 233466777777777777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+-.. .++.|+
T Consensus 103 ~sG~--~d~vLv 112 (393)
T PRK05656 103 RCGD--AEVIIA 112 (393)
T ss_pred HcCC--CCEEEE
Confidence 6433 367776
No 206
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=75.58 E-value=13 Score=38.44 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=57.6
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC-CCc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETV 129 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp-~~~ 129 (462)
++|.|.+.+.-.... ...+ ...+-...++++||+++|++++|||.+.. ++.+... .......+...+|-. ...
T Consensus 253 a~i~g~~~~~d~~~~--~~~~-~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~--D~~E~~a~~~~~~~~~~~~ 327 (407)
T TIGR03150 253 AEIVGYGMSGDAYHI--TAPA-PEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLG--DKAETKAIKRVFGDHAYKL 327 (407)
T ss_pred EEEEEEEECCCCCCC--CCCC-CCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC--CHHHHHHHHHHhccCCCCC
Confidence 467887765332210 0011 11233567899999999999999998764 3322222 233444555555531 123
Q ss_pred ceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
|+.. -....+||+..+..++..++.|.
T Consensus 328 ~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ 359 (407)
T TIGR03150 328 AVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGV 359 (407)
T ss_pred ceeCCcchhchhHHHHHHHHHHHHHHHHhcCC
Confidence 3332 23346678888888888888875
No 207
>PRK05790 putative acyltransferase; Provisional
Probab=75.15 E-value=10 Score=39.43 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ..........+|+.. .+ ..+ +-.+++|+..+..+...+
T Consensus 31 ~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v--------~~~Casg~~al~~A~~~I 102 (393)
T PRK05790 31 AIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTI--------NKVCGSGLKAVALAAQAI 102 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeee--------cccchHHHHHHHHHHHHH
Confidence 578999999999999999988764221 111222334567763 22 222 224567777777777777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+... +++.|+
T Consensus 103 ~sG~--~d~vLv 112 (393)
T PRK05790 103 RAGD--ADIVVA 112 (393)
T ss_pred HcCC--CCEEEE
Confidence 6533 366666
No 208
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=75.08 E-value=8.1 Score=38.85 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHHHc
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I~s 154 (462)
.-.+++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++ |.+|+|-..++..+ ++.
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~------~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQA------NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 445788999999999999999887432 23345678889999854333333 23333444444433 455
Q ss_pred cCC---CEEEEEee
Q 012506 155 GFY---DIGIGAGL 165 (462)
Q Consensus 155 G~~---d~vLv~G~ 165 (462)
|.. |.++.+|+
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 543 56776664
No 209
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=74.75 E-value=24 Score=35.99 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=56.4
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
..|+|.+.+--.... ...+ ...+-...++++||+++||+++|||.|.. |+.+... .....+.+...+|-....|
T Consensus 184 a~I~g~~~~~d~~~~--~~p~-p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~--D~~E~~Ai~~~fg~~~~~~ 258 (342)
T PRK14691 184 AEIVGYGTSADAYHM--TSGA-EDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG--DLGEINAIKHLFGESNALA 258 (342)
T ss_pred EEEEEEEEEcCCCCC--CCCC-CCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC--CHHHHHHHHHHhCCCCCce
Confidence 567787765433210 0111 22445577999999999999999998654 3333222 2445666666666311233
Q ss_pred eEEe-----cCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRTV-----NRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~v-----~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+..+ ...+++|...+..+...|+.|.
T Consensus 259 v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ 289 (342)
T PRK14691 259 ITSTKSATGHLLGAAGGLETIFTVLALRDQI 289 (342)
T ss_pred EECCcccccCCcchhhHHHHHHHHHHHhCCc
Confidence 3322 2234555555555666677663
No 210
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=73.77 E-value=11 Score=39.24 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCCCC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPEKI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+-..+. .......+.+|+...+. ++ +-..+||+..+..+...+
T Consensus 28 ~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V--------~~~Casg~~al~~A~~~I 99 (393)
T cd00826 28 AKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGM--------NNLCGSGLRALALAMQLI 99 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEe--------cchhHHHHHHHHHHHHHH
Confidence 4688899999999999999876643321 11223456777755432 22 223467777777777777
Q ss_pred HhcCCCCcEEEEE
Q 012506 411 KRRGRDCRFGVIS 423 (462)
Q Consensus 411 ~~~~~~~~~gl~~ 423 (462)
+... .++.|+.
T Consensus 100 ~sG~--~~~vlv~ 110 (393)
T cd00826 100 AGGD--ANCILAG 110 (393)
T ss_pred HCCC--CCEEEEE
Confidence 7532 3666653
No 211
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=73.72 E-value=19 Score=37.08 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC-CCcceEE-----ecCCCchHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVPVRT-----VNRQCSSGLQAVADVA 149 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp-~~~p~~~-----v~~~CsSgl~Ai~~Aa 149 (462)
+-...+++++|++++++++|||.+.. ++-+... .......+...++-. ...++.. -+..++||+..+..++
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~--d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLN--DAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccc--cHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 44567899999999999999998765 2222111 233444444445431 1233332 2356889999999999
Q ss_pred HHHHccC
Q 012506 150 AAIKAGF 156 (462)
Q Consensus 150 ~~I~sG~ 156 (462)
.+++.|.
T Consensus 353 ~~l~~~~ 359 (406)
T cd00834 353 LALRDGV 359 (406)
T ss_pred HHHhcCC
Confidence 9999884
No 212
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=73.47 E-value=12 Score=38.91 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC---C--HHHHHHHHHHcCCCCC-CC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA---F--ASQFVYCRNKLGLDPE-KI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda---f--a~~~~~~~e~LGl~~~-~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+... + ........+.+|++.. |. ++ +-.++||+..+..+.+.+
T Consensus 30 ~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v--------~~~caSg~~av~~Aa~~I 101 (394)
T PLN02644 30 SIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTV--------NKVCASGMKAVMLAAQSI 101 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEE--------eccchHHHHHHHHHHHHH
Confidence 57899999999999999998865221 1 1122246678899642 21 12 335788888888888887
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+-... ++.|+
T Consensus 102 ~sG~~--d~vlv 111 (394)
T PLN02644 102 QLGIN--DVVVA 111 (394)
T ss_pred HcCCC--CEEEE
Confidence 76443 77775
No 213
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.85 E-value=15 Score=38.20 Aligned_cols=100 Identities=16% Similarity=0.096 Sum_probs=56.7
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC-CCc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETV 129 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp-~~~ 129 (462)
++|.|.+.+.-... ....+.. .+-...++++||+++|++++|||.+.. |+.++.. .......+...+|.. .+.
T Consensus 254 a~I~g~~~~~d~~~--~~~~~~~-~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~--d~~E~~al~~~~~~~~~~~ 328 (411)
T PRK07314 254 AEVVGYGMTGDAYH--MTAPAPD-GEGAARAMKLALKDAGINPEDIDYINAHGTSTPAG--DKAETQAIKRVFGEHAYKV 328 (411)
T ss_pred EEEEEEEEcCCCCC--CCCCCCC-cHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccc--cHHHHHHHHHHhcccCCCC
Confidence 46777776543221 0011111 122457889999999999999998864 3322222 233444445555531 123
Q ss_pred ceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
|+.. -+..++||...+..++..++.|.
T Consensus 329 ~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 329 AVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred eeECccchhchhHHHHHHHHHHHHHHHHhCCC
Confidence 3322 23356778888888888888874
No 214
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.60 E-value=19 Score=37.28 Aligned_cols=98 Identities=14% Similarity=0.082 Sum_probs=59.5
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
..|.|.+.+--+.. ...++.+ .+-...++++||+++|++++|||.+.. |+.+... .......+...+|- ..|
T Consensus 232 a~I~g~~~~~d~~~--~~~~~~~-~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~--D~~E~~al~~~fg~--~~~ 304 (381)
T PRK05952 232 GQILGFGLTCDAYH--MSAPEPD-GKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN--DQREANLIQALFPH--RVA 304 (381)
T ss_pred EEEEEEEecCCCCC--CCCCCCC-HHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC--cHHHHHHHHHHcCC--CCe
Confidence 36778776533221 1112222 345678999999999999999999864 3332222 23344455555552 334
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -....++|...+..+...|+.|.
T Consensus 305 v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ 335 (381)
T PRK05952 305 VSSTKGATGHTLGASGALGVAFSLLALRHQQ 335 (381)
T ss_pred eecchhhhccChHHHHHHHHHHHHHHHhcCc
Confidence 432 23456788888888888888875
No 215
>PLN02287 3-ketoacyl-CoA thiolase
Probab=71.24 E-value=12 Score=39.71 Aligned_cols=95 Identities=17% Similarity=0.119 Sum_probs=60.0
Q ss_pred EEEEEEEEeccCCCC----CCccH----HHHHHHHHHHcCCCCCCccEEEecCC---C---HHHHHHHHHHcCCCC-CC-
Q 012506 318 GVFRTFAAVGVDPAI----MGVGP----AVAIPAAVKSAGLQLDDIDLFEINEA---F---ASQFVYCRNKLGLDP-EK- 381 (462)
Q Consensus 318 ~~i~g~~~~~~~p~~----~~~~~----~~Ai~~aL~~AGl~~~DID~~eihda---f---a~~~~~~~e~LGl~~-~~- 381 (462)
+.|+|++.+...... ....+ ..|++++|+++||+++|||.+-+=.. + ........+.+|+++ .|
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa 127 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPV 127 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcce
Confidence 567787765533210 11222 57899999999999999998854111 1 112234557789975 23
Q ss_pred CCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 382 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 382 vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
+++ +-.++||+..+..+...++-.. +++.|+
T Consensus 128 ~~V--------~~~CaSG~~Ai~~Aa~~I~sG~--~dvvLv 158 (452)
T PLN02287 128 RTV--------NRQCSSGLQAVADVAAAIKAGF--YDIGIG 158 (452)
T ss_pred EEE--------eccCchHHHHHHHHHHHHHcCC--CCeEEE
Confidence 233 3446788888888888888543 377777
No 216
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=70.83 E-value=16 Score=38.56 Aligned_cols=75 Identities=9% Similarity=0.078 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC---CH--HHHHHHHHHcCCCC-CCC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA---FA--SQFVYCRNKLGLDP-EKI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda---fa--~~~~~~~e~LGl~~-~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++.+|+++||+++|||.+-+=.. +. .....+...+|++. .|. ++ +-..+||+..+..+...+
T Consensus 34 ~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV--------~~aCaSG~~Ai~~Aa~~I 105 (428)
T PRK08963 34 KMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSV--------SRACATSFQAVANVAESI 105 (428)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceee--------hhhhHHHHHHHHHHHHHH
Confidence 57999999999999999998866322 21 12334667789974 333 23 334688888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.... ++.|+
T Consensus 106 ~sG~~--dvvLv 115 (428)
T PRK08963 106 MAGTI--DIGIA 115 (428)
T ss_pred HCCCC--CEEEE
Confidence 76544 66666
No 217
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=70.07 E-value=5 Score=37.66 Aligned_cols=64 Identities=20% Similarity=0.360 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc----cHHHHHHHHcCCCCCcceEEecCCCchHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVA 146 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~----~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~ 146 (462)
....+.+...++++|+++++.+++||.++++.-.+.+. |- ..++-++..++ .|.+.| |.+.++.
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfT-GlRig~~~akgla~~~~----~p~~~v-----ssL~~lA 98 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFT-GLRIGLATAKGLALALG----IPLVGV-----SSLEALA 98 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH-hHHHHHHHHHHHHHHhC----CCEEec-----CHHHHHH
Confidence 35678889999999999999999999999976443333 32 23444444444 467766 3455554
No 218
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=69.85 E-value=13 Score=38.72 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCC--HHHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAF--ASQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----daf--a~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++||+++|||.+-+= +.+ ..........+|++.+ | +++ +-.-+||+..+..+...
T Consensus 32 ~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V--------~~aCaSg~~Al~~A~~~ 103 (392)
T PRK07108 32 GHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTV--------NRFCSSGLQTIALAAQR 103 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeee--------cchhhHHHHHHHHHHHH
Confidence 579999999999999999987652 222 1234455567788742 2 233 33346777778888877
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++... ++..|+
T Consensus 104 I~sG~--~d~vla 114 (392)
T PRK07108 104 VIAGE--GDVFVA 114 (392)
T ss_pred HHCCC--CCEEEE
Confidence 77533 355555
No 219
>PRK07937 lipid-transfer protein; Provisional
Probab=69.42 E-value=42 Score=34.43 Aligned_cols=104 Identities=15% Similarity=0.077 Sum_probs=59.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+.|.|.|.+...-... -..+|..+.. +.+.++++ +|++++|||.+-+=-. .+...-.....+||...
T Consensus 225 ~pv~I~g~~~~~~~~~--~~~~d~~~~~----~~~~a~~~aAgi~~~diD~~Ei~D~------F~~~~l~~~e~lGl~g~ 292 (352)
T PRK07937 225 RPAWITGIEHRIESPS--LGARDLTRSP----STALAAEAATGGDAGGVDVAELHAP------FTHQELILREALGLGDK 292 (352)
T ss_pred CcEEEEEEEEeeCCcc--ccccccccHH----HHHHHHHHhcCCCHHHCCEEEEeCC------ChHHHHHHHHHcCCCCC
Confidence 4589999887421110 0112333333 33445555 5999999998755211 12223344456787322
Q ss_pred cceE------EecCCCchHHHHHHHHHHHHHccCCCEEEEEee
Q 012506 129 VPVR------TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165 (462)
Q Consensus 129 ~p~~------~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~ 165 (462)
.|+- .-+...+||..-+..++..|+.+.++++|+.+.
T Consensus 293 ~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~ 335 (352)
T PRK07937 293 TKVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHAT 335 (352)
T ss_pred CCcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 2222 112223478888889999999998999998653
No 220
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=68.99 E-value=16 Score=38.05 Aligned_cols=75 Identities=23% Similarity=0.180 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC---HH--HHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF---AS--QFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf---a~--~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+=..+ .. ........+|++. .| +++ +-..+||+..+..+...+
T Consensus 36 ~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V--------~~aCaSG~~Av~~A~~~I 107 (397)
T PRK06954 36 AAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTV--------NKMCGSGMRAAMFAHDML 107 (397)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeec--------cccchHHHHHHHHHHHHH
Confidence 579999999999999999988652211 11 1122223345553 22 222 234577888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+... .++.|+
T Consensus 108 ~sG~--~d~vLv 117 (397)
T PRK06954 108 VAGS--VDVIVA 117 (397)
T ss_pred HCCC--CCEEEE
Confidence 7543 366666
No 221
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=67.84 E-value=37 Score=35.56 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCC--CCCcceEEe-----cCCCchHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF--PETVPVRTV-----NRQCSSGLQAVADVA 149 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Gl--p~~~p~~~v-----~~~CsSgl~Ai~~Aa 149 (462)
-...++++||+++|+++++||.|-. |+.+... .....+.+...+|- ++..|+..+ ....++|...+..++
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~--D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~ 356 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG--DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITV 356 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC--CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHH
Confidence 3567899999999999999998754 3333222 34456666666653 123344332 334667777777777
Q ss_pred HHHHccC
Q 012506 150 AAIKAGF 156 (462)
Q Consensus 150 ~~I~sG~ 156 (462)
..|+.|.
T Consensus 357 l~l~~~~ 363 (414)
T PRK08722 357 MSLVDQI 363 (414)
T ss_pred HHHhcCc
Confidence 8888774
No 222
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=67.70 E-value=33 Score=35.91 Aligned_cols=99 Identities=9% Similarity=-0.021 Sum_probs=57.4
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC--CC
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP--ET 128 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp--~~ 128 (462)
.|+|.+.+.-+.. -...+. ..+-...++++||++ +|++++|||.|-. |+.+... .......+...+|-. +.
T Consensus 262 ~i~g~~~~~d~~~--~~~p~~-~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~--D~~E~~al~~~~~~~~~~~ 336 (421)
T PTZ00050 262 EIRGYGSSSDAHH--ITAPHP-DGRGARRCMENALKDGANININDVDYVNAHATSTPIG--DKIELKAIKKVFGDSGAPK 336 (421)
T ss_pred EEEEEEEcCCCCC--CCCCCC-ChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC--CHHHHHHHHHHhccccCCC
Confidence 6778776543221 001111 234456789999999 9999999998764 3222111 123334444555531 12
Q ss_pred cceE-----EecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVR-----TVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~-----~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.|+. .-....++|...+..+...++.|.
T Consensus 337 ~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ 369 (421)
T PTZ00050 337 LYVSSTKGGLGHLLGAAGAVESIVTILSLYEQI 369 (421)
T ss_pred ceEECccccccccHHHHHHHHHHHHHHHHHcCc
Confidence 3332 223456788888888888888874
No 223
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=67.69 E-value=31 Score=35.99 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcceEEe-----cCCCchHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTV-----NRQCSSGLQAVADVAA 150 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-----~~~CsSgl~Ai~~Aa~ 150 (462)
+-...++++||+++|+++++||.|.. |+.+... .......+...+|-....++..+ ...+++|...+..++.
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~--D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l 365 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG--DLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTIL 365 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc--hHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHH
Confidence 44678899999999999999998764 3332222 23445555556662112333222 2235666666677777
Q ss_pred HHHccC
Q 012506 151 AIKAGF 156 (462)
Q Consensus 151 ~I~sG~ 156 (462)
+++.|.
T Consensus 366 ~l~~g~ 371 (424)
T PRK06333 366 ALRDQI 371 (424)
T ss_pred HHhcCC
Confidence 888774
No 224
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=67.21 E-value=19 Score=37.10 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecC----CCchHHHHHHHHHHHHHc
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR----QCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~----~CsSgl~Ai~~Aa~~I~s 154 (462)
...+++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++.+ +++|-..+|.. .++.
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~---~~~~ 352 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA------NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDE---AVRS 352 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHH---HHHc
Confidence 335778889999999999998877332 2234456788999985433333333 33344444443 3455
Q ss_pred cCC---CEEEEEee
Q 012506 155 GFY---DIGIGAGL 165 (462)
Q Consensus 155 G~~---d~vLv~G~ 165 (462)
|.. |.+|.+|+
T Consensus 353 g~~~~Gd~vll~~~ 366 (379)
T PLN02326 353 GKVKKGDVIATAGF 366 (379)
T ss_pred CCCCCCCEEEEEEE
Confidence 543 66777665
No 225
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=66.85 E-value=13 Score=38.05 Aligned_cols=88 Identities=9% Similarity=-0.017 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC-CCCcceEE-----ecCCCchHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF-PETVPVRT-----VNRQCSSGLQAVADVAA 150 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl-p~~~p~~~-----v~~~CsSgl~Ai~~Aa~ 150 (462)
+=+.++++++|+++|+++++||.|+.-- ++...........+...+|- ....|.+. -+.+.++|...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~-~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADL-NGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCC-CCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 4557899999999999999999887522 12111011223333333432 11223332 23455677777888888
Q ss_pred HHHccCC--CEEEEEee
Q 012506 151 AIKAGFY--DIGIGAGL 165 (462)
Q Consensus 151 ~I~sG~~--d~vLv~G~ 165 (462)
.++.|.. +.+|+...
T Consensus 313 ~~~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLS 329 (348)
T ss_pred HHHcCcCCCCcEEEEec
Confidence 9999954 66676543
No 226
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=66.61 E-value=24 Score=36.74 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC------HHHHHHHHHHcCCCC-CCC-CCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF------ASQFVYCRNKLGLDP-EKI-NVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf------a~~~~~~~e~LGl~~-~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++|+.++|||.+-+-..+ ........+.+|++. .|. ++ +-..+||+..+..+...
T Consensus 32 ~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V--------~~aCaSG~~Al~~A~~~ 103 (391)
T PRK07661 32 ALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITI--------NRYCSSGLQSIAYGAER 103 (391)
T ss_pred HHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeeh--------hhhhhHHHHHHHHHHHH
Confidence 468999999999888999988664222 112234667899874 332 33 23457888888888888
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++.... ++.|+
T Consensus 104 I~sG~~--d~vLv 114 (391)
T PRK07661 104 IMLGHS--EAVIA 114 (391)
T ss_pred HHcCCC--CEEEE
Confidence 876433 66666
No 227
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=66.56 E-value=38 Score=35.38 Aligned_cols=97 Identities=10% Similarity=0.007 Sum_probs=54.8
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
+.|+|.+.+.... +... .-...+++++|+++||+++|||.+-+--. ...........+|+......
T Consensus 280 a~I~g~~~~~~~~-------~~~~-~~~~~a~~~al~~Agl~~~DId~~ei~D~------f~~~~l~~~e~lg~~~~~~p 345 (401)
T PRK09050 280 ARILGMATAGVEP-------RIMG-IGPAPATRKLLARLGLTIDQFDVIELNEA------FAAQGLAVLRQLGLADDDAR 345 (401)
T ss_pred EEEEEEEEeccCC-------cccc-chHHHHHHHHHHHcCCCHHHCCccccCcH------hHHHHHHHHHHcCCCCCCCC
Confidence 5677777653321 1111 12357889999999999999998874211 11122234456887321112
Q ss_pred EEecCC--------CchHHHHHHHHHHHHHccCCCEEEE
Q 012506 132 RTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (462)
Q Consensus 132 ~~v~~~--------CsSgl~Ai~~Aa~~I~sG~~d~vLv 162 (462)
++.+.+ .+||+.-+..++..++......+|+
T Consensus 346 vN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~~ 384 (401)
T PRK09050 346 VNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALC 384 (401)
T ss_pred EeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 222222 3456667777888887554555554
No 228
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=66.52 E-value=34 Score=35.42 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=57.6
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC----
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP---- 126 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp---- 126 (462)
+.|.|.+.+.-.... .... ...+-...++++||+++|+++++||.+.. |+.+... .......+...++-.
T Consensus 257 a~i~g~~~~~~~~~~--~~~~-p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~--D~~E~~al~~~f~~~~~~~ 331 (421)
T cd00833 257 AVIRGSAVNQDGRTK--GITA-PSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG--DPIEVEALAKVFGGSRSAD 331 (421)
T ss_pred EEEEEEEEcCCCCCC--CCcC-CCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC--CHHHHHHHHHHHhccCCCC
Confidence 467777655333211 0111 12455578999999999999999998865 3322222 223334444443320
Q ss_pred CCcceE-----EecCCCchHHHHHHHHHHHHHccCCC
Q 012506 127 ETVPVR-----TVNRQCSSGLQAVADVAAAIKAGFYD 158 (462)
Q Consensus 127 ~~~p~~-----~v~~~CsSgl~Ai~~Aa~~I~sG~~d 158 (462)
...|+. .-....++|+..+..++..++.|.+-
T Consensus 332 ~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip 368 (421)
T cd00833 332 QPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIP 368 (421)
T ss_pred CceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcC
Confidence 112222 22444667888888888888887543
No 229
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=64.51 E-value=35 Score=35.62 Aligned_cols=98 Identities=11% Similarity=0.038 Sum_probs=54.7
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
.+.|+|.+.+-... +... .-...+++++|+++|++++|||.+-+.-. ...........+|+.....
T Consensus 278 ~~~I~g~~~~~~~~-------~~~~-~~~~~a~~~al~~Agl~~~DID~~ei~D~------f~~~~l~~~e~lG~~~~~~ 343 (400)
T TIGR02430 278 RARILAAATAGVEP-------RIMG-IGPVPATQKLLARAGLSIDQFDVIELNEA------FAAQALAVLRELGLADDDA 343 (400)
T ss_pred cEEEEEEEEecCCC-------cccc-chHHHHHHHHHHHhCCCHHHCCCcccCcH------HHHHHHHHHHHcCCCCCCC
Confidence 46777776653211 1111 12357889999999999999998863211 1122333445688732212
Q ss_pred eEEecCC--------CchHHHHHHHHHHHHHccCCCEEEE
Q 012506 131 VRTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (462)
Q Consensus 131 ~~~v~~~--------CsSgl~Ai~~Aa~~I~sG~~d~vLv 162 (462)
.+..+.+ .+||..-+..++..++....+++|+
T Consensus 344 pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~ 383 (400)
T TIGR02430 344 RVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALC 383 (400)
T ss_pred eECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 2222222 3466677777777776544455554
No 230
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=64.08 E-value=43 Score=36.54 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=57.6
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
.|.|.+.+--+.. -.-.+... .=...++++||+++|+++++||.|-. |+.++.+ .......+...+|-....|+
T Consensus 384 ~I~G~g~s~Da~~--~t~p~p~g-~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g--D~~E~~Ai~~~Fg~~~~~pV 458 (540)
T PLN02787 384 EFLGGSFTCDAYH--MTEPHPEG-AGVILCIEKALAQSGVSKEDVNYINAHATSTKAG--DLKEYQALMRCFGQNPELRV 458 (540)
T ss_pred EEEEEEEecCCCC--CCCCCcCH-HHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCC--CHHHHHHHHHHhCCCCCcee
Confidence 5778776543221 00011111 22467899999999999999998753 3333322 23445555555653112333
Q ss_pred E-----EecCCCchHHHHHHHHHHHHHccC
Q 012506 132 R-----TVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 132 ~-----~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
. .-...+++|...+..+..+|+.|.
T Consensus 459 ~S~Ks~iGH~~gAAGa~eli~~~lal~~g~ 488 (540)
T PLN02787 459 NSTKSMIGHLLGAAGAVEAIATVQAIRTGW 488 (540)
T ss_pred eCCCCCcCCCcccchHHHHHHHHHHHhcCC
Confidence 2 223456777777777888888885
No 231
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=64.08 E-value=27 Score=36.22 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-------CHHHHHHHHHHcCCCCCCC-CCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-------FASQFVYCRNKLGLDPEKI-NVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-------fa~~~~~~~e~LGl~~~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..|++++|+++||+++|||.+-+-.. .....+.....+|+...+. ++ +..++||+..+..+...
T Consensus 27 ~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p~~~v--------~~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 27 VRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKPATRV--------ENACATGSAAVYAALDA 98 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCceeee--------ccccHHHHHHHHHHHHH
Confidence 57899999999999999998755311 1111222223445433221 11 22356777777777777
Q ss_pred HHhcCCCCcEEEEE
Q 012506 410 MKRRGRDCRFGVIS 423 (462)
Q Consensus 410 L~~~~~~~~~gl~~ 423 (462)
++... +++.|+.
T Consensus 99 I~sG~--~d~vLvv 110 (389)
T PRK07516 99 IEAGR--ARIVLVV 110 (389)
T ss_pred HHCCC--CCEEEEE
Confidence 77543 3666653
No 232
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=63.94 E-value=40 Score=35.00 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC----CCcceEEe-----cCCCchHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP----ETVPVRTV-----NRQCSSGLQAV 145 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp----~~~p~~~v-----~~~CsSgl~Ai 145 (462)
.+-...+++++|+++|+.++|||.+.. |+.+... .......+...+|.- ...|+..+ ...++||+..+
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~--d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l 355 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG--DPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGL 355 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC--CHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHH
Confidence 345577899999999999999998765 3332221 223344444445431 11233222 33466788888
Q ss_pred HHHHHHHHccCC
Q 012506 146 ADVAAAIKAGFY 157 (462)
Q Consensus 146 ~~Aa~~I~sG~~ 157 (462)
..+...++.|.+
T Consensus 356 ~~~~~~l~~~~i 367 (424)
T smart00825 356 IKVVLALRHGTI 367 (424)
T ss_pred HHHHHHHhCCCC
Confidence 888888888753
No 233
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=63.55 E-value=24 Score=36.90 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=48.0
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEec----CCCH--HHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSA-GLQLDDIDLFEIN----EAFA--SQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 338 ~~Ai~~aL~~A-Gl~~~DID~~eih----dafa--~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
..|++++|+++ ||+++|||.+-+= +.+. .........+|++. .| +++ +-..+||+..+..+..
T Consensus 36 ~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V--------~~aCaSg~~Al~~A~~ 107 (399)
T PRK09052 36 AHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTV--------NRFCASGLQAVAMAAD 107 (399)
T ss_pred HHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeee--------cchhhHHHHHHHHHHH
Confidence 57999999997 9999999988653 2211 12223445568864 22 222 2345678888888888
Q ss_pred HHHhcCCCCcEEEE
Q 012506 409 EMKRRGRDCRFGVI 422 (462)
Q Consensus 409 qL~~~~~~~~~gl~ 422 (462)
.++-.. .++.|+
T Consensus 108 ~I~sG~--~d~vLv 119 (399)
T PRK09052 108 RIRVGE--ADVMIA 119 (399)
T ss_pred HHHCCC--CCEEEE
Confidence 887533 366666
No 234
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.29 E-value=34 Score=35.37 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC-CCcceEE-----ecCCCchHHHHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVPVRT-----VNRQCSSGLQAVADV 148 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp-~~~p~~~-----v~~~CsSgl~Ai~~A 148 (462)
.+-...++++||+++|+++++||.|.. ++.+... .......+...++-. ...|+.. -+..+++|...+..+
T Consensus 273 ~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~--D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~ 350 (407)
T cd00828 273 GKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN--DVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGA 350 (407)
T ss_pred hHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc--cHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHH
Confidence 355578899999999999999998764 3322222 233444444444421 1223332 244566777777778
Q ss_pred HHHHHccC
Q 012506 149 AAAIKAGF 156 (462)
Q Consensus 149 a~~I~sG~ 156 (462)
...++.|.
T Consensus 351 ~~~l~~~~ 358 (407)
T cd00828 351 LQSLEHGL 358 (407)
T ss_pred HHHHhcCc
Confidence 88887763
No 235
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=62.71 E-value=20 Score=37.90 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCCCC--ccEEEecCCCH-------HHHHHHHHHcCCC-------CCCCCCCCCccccCCccchHHHH
Q 012506 338 AVAIPAAVKSAGLQLDD--IDLFEINEAFA-------SQFVYCRNKLGLD-------PEKINVNGGALAIGHPLGTTGAR 401 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~D--ID~~eihdafa-------~~~~~~~e~LGl~-------~~~vn~~GG~~a~Ghp~gatG~~ 401 (462)
..+++++|+++||+++| ||.+-+-..+. .........+|++ ..|... . +-.++||+.
T Consensus 53 ~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~------V-~~~caSG~~ 125 (438)
T PTZ00455 53 ATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMR------V-EGACASGGL 125 (438)
T ss_pred HHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeE------E-ECcCHHHHH
Confidence 57899999999999999 99886532221 1122334344444 322111 1 334678888
Q ss_pred HHHHHHHHHHhcCCCCcEEEE
Q 012506 402 CVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 402 ~~~~~~~qL~~~~~~~~~gl~ 422 (462)
.+..+...++-... +..|+
T Consensus 126 Ai~~A~~~I~sG~~--dvvlv 144 (438)
T PTZ00455 126 AVQSAWEALLAGTS--DIALV 144 (438)
T ss_pred HHHHHHHHHHCCCC--CEEEE
Confidence 88888888876533 56655
No 236
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=62.65 E-value=43 Score=34.92 Aligned_cols=96 Identities=15% Similarity=0.219 Sum_probs=54.0
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
++|.|.+.+--+.. ..+.+..- ..+++++||+++|++++|||.+.. |+.+... .......+ ...+. ...|
T Consensus 261 a~I~g~~~~~d~~~----~~~p~~~~-~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~--D~~E~~al-~~~~~-~~~~ 331 (410)
T PRK07103 261 AKLLGWSMRLDANR----GPDPSLEG-EMRVIRAALRRAGLGPEDIDYVNPHGTGSPLG--DETELAAL-FASGL-AHAW 331 (410)
T ss_pred EEEEEEEEecCCCC----CCCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEccCCCCCCC--CHHHHHHH-hcCCC-CCCe
Confidence 46778776432221 12223333 357899999999999999998754 3222211 12223333 22232 1233
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -....++|+..+..+...++.|.
T Consensus 332 v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ 362 (410)
T PRK07103 332 INATKSLTGHGLSAAGIVELIATLLQMRAGF 362 (410)
T ss_pred EECCCcccccCchhhhHHHHHHHHHHHhCCe
Confidence 322 23446778888888888888774
No 237
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=62.01 E-value=44 Score=35.62 Aligned_cols=39 Identities=8% Similarity=0.100 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLG 376 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LG 376 (462)
..|++++|+++|+++++||++.+- +.+.+...+..+.||
T Consensus 55 ~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~ 98 (454)
T TIGR01833 55 LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFE 98 (454)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHH
Confidence 578999999999999999999874 333444444445443
No 238
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=61.79 E-value=24 Score=36.81 Aligned_cols=75 Identities=16% Similarity=0.078 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----C--HHHHHHHHHHcCCCCC-CC-CCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----F--ASQFVYCRNKLGLDPE-KI-NVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----f--a~~~~~~~e~LGl~~~-~v-n~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++||+++|||.+-+=.. + ..........+|++.. |. ++ +-..+||+..+..+...
T Consensus 31 ~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV--------~~~CaSG~~Ai~~A~~~ 102 (401)
T PRK08131 31 ATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTV--------NRLCASGLAAVIDAARA 102 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeee--------echhhhHHHHHHHHHHH
Confidence 57899999999999999998865221 1 1123345677888732 22 22 33468888888888888
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++-... +..|+
T Consensus 103 I~sG~~--dvvla 113 (401)
T PRK08131 103 ITCGEG--DLYLA 113 (401)
T ss_pred HHCCCC--CEEEE
Confidence 875433 56665
No 239
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=61.42 E-value=48 Score=34.99 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=54.0
Q ss_pred EEEEEeeecccccCCCCCCCCCC-HHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCC--
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTY-PDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-- 127 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~-~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~-- 127 (462)
+.|.|.+.+.-+.. ..... ..+-...++++||+++||++++||.+.+ |+.+..+ .....+.+...+|-..
T Consensus 277 a~I~g~~~~~d~~~----~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~--D~~E~~ai~~~~~~~~~~ 350 (437)
T PLN02836 277 AEVRGYGMSGDAHH----ITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG--DAVEARAIKTVFSEHATS 350 (437)
T ss_pred EEEEeeeecCCCCC----CcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc--CHHHHHHHHHHhcccccC
Confidence 46778776543221 11111 1234567899999999999999998764 2222211 2333444444443210
Q ss_pred -CcceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 128 -TVPVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 128 -~~p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
..|+.. -+...++|...+..++.+++.|.
T Consensus 351 ~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (437)
T PLN02836 351 GGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGI 385 (437)
T ss_pred CCCeeECCcccccccHHHHHHHHHHHHHHHHhcCc
Confidence 122222 22335566666677777787773
No 240
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.01 E-value=36 Score=35.73 Aligned_cols=96 Identities=17% Similarity=0.131 Sum_probs=54.3
Q ss_pred EEEEEeeecccccCCCCCCCCCCH---HHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCC-C
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYP---DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF-P 126 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~---~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Gl-p 126 (462)
..|+|++.|--.. ..+.| -+=+..+++.||+++|+++++||.|-. |+.++.+ .......+...+|= .
T Consensus 254 aei~G~g~~~Da~------h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n--D~~E~~ai~~vfg~~~ 325 (412)
T COG0304 254 AEIVGYGTTSDAY------HITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN--DKAESLAIKRVFGEHA 325 (412)
T ss_pred EEEEEEEeccccc------ccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc--cHHHHHHHHHHhcccc
Confidence 4577777665432 22222 344568999999999999999998864 4443333 23455555555662 1
Q ss_pred C-----CcceEEecCCCchHHHHHHHHHHHHHcc
Q 012506 127 E-----TVPVRTVNRQCSSGLQAVADVAAAIKAG 155 (462)
Q Consensus 127 ~-----~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG 155 (462)
. .+..++-....++|..-...+...|+.|
T Consensus 326 ~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g 359 (412)
T COG0304 326 KSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDG 359 (412)
T ss_pred cCceeeecccccccChhhHHHHHHHHHHHHHhcC
Confidence 1 2223333333344444444566666655
No 241
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.83 E-value=46 Score=34.89 Aligned_cols=99 Identities=15% Similarity=0.073 Sum_probs=56.6
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
..|+|.+.+--+.. -...+... .-...++++||+++|++++|||.+-. |+.+..+ .....+.+...+|-. ..+
T Consensus 264 a~i~g~~~~~dg~~--~~~~~~~~-~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~--D~~E~~Al~~~fg~~-~~~ 337 (418)
T PRK07910 264 ARIMGASITSDGFH--MVAPDPNG-ERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG--DVAEGKAINNALGGH-RPA 337 (418)
T ss_pred EEEEEEEEecCCCC--CCCCCCCH-HHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC--CHHHHHHHHHHhCCC-CCc
Confidence 35677665432221 01122222 23578999999999999999998853 3322222 244566666667741 223
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -...+++|...+..+..+++.|.
T Consensus 338 v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ 368 (418)
T PRK07910 338 VYAPKSALGHSVGAVGAVESILTVLALRDGV 368 (418)
T ss_pred eeCccccccccHHHHHHHHHHHHHHHHhcCc
Confidence 322 23345667666666777777763
No 242
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=59.34 E-value=7.4 Score=38.29 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.-.+.+...++++|++++++++|||.|.++.-.+.+. -|...++.++..+++ |.+.|+.
T Consensus 28 ~H~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~----Pli~v~~ 89 (268)
T PF00814_consen 28 QHSENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNI----PLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEEH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCC----CeEeecc
Confidence 4467788999999999999999999999976543322 012345555555555 7777743
No 243
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=58.63 E-value=57 Score=34.08 Aligned_cols=97 Identities=10% Similarity=0.018 Sum_probs=54.9
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
+.|+|.+..... .+... .-...+++++|+++|++++|||.+-+--. ...........+|+......
T Consensus 279 a~I~g~~~~~~~-------p~~~~-~~~~~A~~~al~~AGl~~~DID~iei~da------fa~~~l~~~e~lg~~~~~~p 344 (400)
T PRK13359 279 ARVLGIATAGVE-------PRVMG-IGPAPATQKLLARLGMTLDQFDVIELNEA------FASQGLAVLRELGLADDDAR 344 (400)
T ss_pred EEEEEEEEecCC-------CCccc-hhHHHHHHHHHHHhCCCHHHcCcCccCcH------hHHHHHHHHHHcCCCCCCCC
Confidence 678887765321 11111 22367899999999999999998863111 11112233346787211122
Q ss_pred EEecCC--------CchHHHHHHHHHHHHHccCCCEEEE
Q 012506 132 RTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (462)
Q Consensus 132 ~~v~~~--------CsSgl~Ai~~Aa~~I~sG~~d~vLv 162 (462)
++.+.+ .+||..-+..++..++......+|+
T Consensus 345 vN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~ 383 (400)
T PRK13359 345 VNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALC 383 (400)
T ss_pred EECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 222222 3467777777888887544455554
No 244
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=58.33 E-value=31 Score=35.89 Aligned_cols=77 Identities=13% Similarity=-0.021 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..+++++|+++||+++|||.+-+-..+. .......-..+++. ++... .=+-..+||+..+..+...++
T Consensus 37 ~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~~-~~p~~-----~V~~~CaSg~~ai~~A~~~I~ 110 (394)
T PRK06445 37 AMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPY-NIPAM-----AVDRQCASSLTTVSIGAMEIA 110 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCCC-CCcch-----hhhhhhHHHHHHHHHHHHHHH
Confidence 5799999999999999999876533211 11122222234432 12110 113446788888888888888
Q ss_pred hcCCCCcEEEE
Q 012506 412 RRGRDCRFGVI 422 (462)
Q Consensus 412 ~~~~~~~~gl~ 422 (462)
... +++.|+
T Consensus 111 sG~--~d~vLv 119 (394)
T PRK06445 111 TGM--ADIVIA 119 (394)
T ss_pred cCC--CCEEEE
Confidence 543 377777
No 245
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=55.95 E-value=34 Score=35.76 Aligned_cols=75 Identities=12% Similarity=0.075 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..|++++|+++||+++|||.+-+-.... .........+|++.. | +++ +-.-+||+..+..+...
T Consensus 33 ~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~V--------n~aCaSg~~Ai~~A~~~ 104 (402)
T PRK08242 33 AGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQI--------NRFCASGLEAVNLAAAK 104 (402)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEE--------cchhhhHHHHHHHHHHH
Confidence 4689999999999999999988743322 123344566788542 1 122 22235667777777777
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++... .++.|+
T Consensus 105 I~sG~--~d~vLv 115 (402)
T PRK08242 105 VRSGW--DDLVIA 115 (402)
T ss_pred HHcCC--CCEEEE
Confidence 66433 366655
No 246
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=55.61 E-value=31 Score=35.92 Aligned_cols=24 Identities=21% Similarity=0.501 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..|++++|+++||+++|||.+-+-
T Consensus 31 ~eA~~~AL~dAgl~~~dID~vi~g 54 (403)
T PRK06289 31 REVVDGTLAAAGVDADDIEVVHVG 54 (403)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE
Confidence 579999999999999999988654
No 247
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=55.41 E-value=45 Score=35.19 Aligned_cols=75 Identities=7% Similarity=0.108 Sum_probs=48.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHH-HHHHHHH----cCCCC-CCC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQ-FVYCRNK----LGLDP-EKI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~-~~~~~e~----LGl~~-~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+=..+... .....+. .|++. .|. ++ +-..+||+..+..+...+
T Consensus 36 ~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V--------~~~CaSG~~A~~~a~~~I 107 (430)
T TIGR02446 36 KMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSV--------TRACATSFQSAVNVAESI 107 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhh--------hhhhhHHHHHHHHHHHHH
Confidence 579999999999999999988763332111 1123333 58873 332 23 334688888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.... ++.|+
T Consensus 108 ~sG~~--dvvla 117 (430)
T TIGR02446 108 MAGAI--DIGIA 117 (430)
T ss_pred HCCCC--CEEEE
Confidence 76543 55555
No 248
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=53.14 E-value=44 Score=34.71 Aligned_cols=75 Identities=9% Similarity=0.002 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH--H----HHHHHHHHcCCCC-CCC-CCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA--S----QFVYCRNKLGLDP-EKI-NVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa--~----~~~~~~e~LGl~~-~~v-n~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++|++++|||.+-+=..+. . ........+|++. .|. ++ +-..+||+..+..+...
T Consensus 31 ~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV--------~~~CaSG~~A~~~A~~~ 102 (387)
T PRK07850 31 GAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTI--------DCQCGSAQQANHLVAGL 102 (387)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEE--------ecccccHHHHHHHHHHH
Confidence 5789999999999999999887633221 1 1223334578874 332 22 33458888889999888
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++-... +++|+
T Consensus 103 I~sG~~--dvvla 113 (387)
T PRK07850 103 IAAGAI--DVGIA 113 (387)
T ss_pred HHCCCC--CEEEE
Confidence 886544 56555
No 249
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.03 E-value=74 Score=33.21 Aligned_cols=95 Identities=14% Similarity=0.232 Sum_probs=55.8
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
.|.|.+.+.-+.. +...+. +-...+++++|+++++++++||.|.. |+-+..+ .....+.+...+|- ..|+
T Consensus 256 ~i~g~~~~~d~~~----~~~p~~-~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~--D~~E~~Ai~~~fg~--~~pv 326 (405)
T PRK09116 256 EIVGFGTNSDGAH----VTQPQA-ETMQIAMELALKDAGLAPEDIGYVNAHGTATDRG--DIAESQATAAVFGA--RMPI 326 (405)
T ss_pred EEEEEEEcCCCCc----CCCCCH-HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC--CHHHHHHHHHHhCC--CCee
Confidence 4777766533211 112233 34468899999999999999998763 4433322 24455666666662 2343
Q ss_pred EEe-----cCCCchHHHHHHHHHHHHHccC
Q 012506 132 RTV-----NRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 132 ~~v-----~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
..+ ...+++|..-+..+...|+.|.
T Consensus 327 ~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ 356 (405)
T PRK09116 327 SSLKSYFGHTLGACGALEAWMSIEMMNEGW 356 (405)
T ss_pred ECcchhhcccHHHHHHHHHHHHHHHHHcCc
Confidence 322 2335566666666677777764
No 250
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=53.01 E-value=16 Score=36.59 Aligned_cols=58 Identities=26% Similarity=0.277 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
-.+.+...++++|++++++++|||.|.++.-.+... -+-..++.++..+++ |.+.|+.
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~----p~~~v~h 108 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDK----PLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCC----CEeeccc
Confidence 467778899999999999999999999976433322 012345566666665 5665543
No 251
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=51.99 E-value=47 Score=34.23 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-------ecCCCchHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-------VNRQCSSGLQAVADVAA 150 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-------v~~~CsSgl~Ai~~Aa~ 150 (462)
-...+++++|+++|++++|||.+.+-.. ...........+|++.. |... .+....||..-+..+..
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~ea------fa~~~~~~~e~lgl~~~-~vn~~GG~la~Ghp~GatG~~~~~~~~~ 331 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEA------FASKVVACAKELQIPYE-KLNVNGGAIALGHPYGASGAMLVTRLFY 331 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecch------hHHHHHHHHHhcCCCch-hcccCCcHHhccCchhhhHHHHHHHHHH
Confidence 4567889999999999999999866211 11222234456888532 2211 22335566666666666
Q ss_pred HHHccCCCEEEE
Q 012506 151 AIKAGFYDIGIG 162 (462)
Q Consensus 151 ~I~sG~~d~vLv 162 (462)
.++.-....+|+
T Consensus 332 ql~~~~~~~g~~ 343 (361)
T PRK06690 332 QAKREDMKYGIA 343 (361)
T ss_pred HHHHhCCCEEEE
Confidence 665433444443
No 252
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=51.11 E-value=47 Score=34.32 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC--CHHH----HHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA--FASQ----FVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda--fa~~----~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++||+++|||.+-+-.. +... .....-.+|++.. + +++ +-.++||...+..+...
T Consensus 31 ~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v--------~~acaSg~~Av~~Aa~~ 102 (382)
T PRK07801 31 AHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTV--------DRQCGSSQQAIHFAAQA 102 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeee--------cchhhhHHHHHHHHHHH
Confidence 57899999999999999998765211 1111 1111113566431 1 112 23467888889999988
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++.... ++.|+
T Consensus 103 I~sG~~--d~vLv 113 (382)
T PRK07801 103 VMSGTQ--DLVVA 113 (382)
T ss_pred HHCCCC--CEEEE
Confidence 886544 67775
No 253
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=50.55 E-value=99 Score=33.00 Aligned_cols=41 Identities=10% Similarity=0.136 Sum_probs=30.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHH---HHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYC---RNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~---~e~LGl~ 378 (462)
..|++++|+++|++++|||++.+- +.+.+...+. .+.||..
T Consensus 58 ~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~ 106 (459)
T PLN02577 58 LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT 106 (459)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC
Confidence 579999999999999999999874 4455544433 4566653
No 254
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=49.99 E-value=19 Score=36.33 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc----cHHHHHHHHcCCCCCcceEEecC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~----~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.-.+.+...++++|++++++.++||.|.++.-.+.+. +- ..++-++..+++ |.+.|+.
T Consensus 48 ~H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsft-glrig~~~Ak~la~~~~~----p~~~v~h 109 (314)
T TIGR03723 48 AHLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIG-ALLVGVSFAKALALALNK----PLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH-hHHHHHHHHHHHHHHhCC----CEEeccc
Confidence 4577888899999999999999999999976443332 22 345555555555 6666643
No 255
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=47.93 E-value=63 Score=33.55 Aligned_cols=75 Identities=11% Similarity=0.058 Sum_probs=49.3
Q ss_pred HHHHHHHHHH-cCCCCCCccEEEecCC---CH---HHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHH
Q 012506 338 AVAIPAAVKS-AGLQLDDIDLFEINEA---FA---SQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 338 ~~Ai~~aL~~-AGl~~~DID~~eihda---fa---~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
..+++++|++ +||+++|||.+-+=.. +. .........+|++.. | +++ +-..+||+..+..+..
T Consensus 32 ~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V--------~~~caSG~~Ai~~A~~ 103 (387)
T PRK08947 32 AHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTV--------NRLCGSSMQALHDAAR 103 (387)
T ss_pred HHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceee--------echhHHHHHHHHHHHH
Confidence 4678999997 7999999998765221 11 112334566888742 2 233 2346788888888888
Q ss_pred HHHhcCCCCcEEEE
Q 012506 409 EMKRRGRDCRFGVI 422 (462)
Q Consensus 409 qL~~~~~~~~~gl~ 422 (462)
.++-... +..|+
T Consensus 104 ~I~sG~~--d~vlv 115 (387)
T PRK08947 104 AIMTGDG--DVFLI 115 (387)
T ss_pred HHHCCCC--CEEEE
Confidence 8876544 66666
No 256
>PRK14878 UGMP family protein; Provisional
Probab=47.85 E-value=30 Score=34.97 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=47.3
Q ss_pred EEEeeecccccCCCCCCCCC---CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCC
Q 012506 54 IVAAYRTALCKSKRGGFKDT---YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPE 127 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~---~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~ 127 (462)
|+...+..+.+.++|-.+.. .-.+.+..+++++|+++|++++|||.|.++.-.+... -+...++.++..++.
T Consensus 20 i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~-- 97 (323)
T PRK14878 20 VLANVRDTYVPEKGGIHPREAAQHHAEVAPELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK-- 97 (323)
T ss_pred EEEEEEEecccCcCCcCccHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC--
Confidence 45555544544332322221 2234566899999999999999999999976433222 022346677777776
Q ss_pred CcceEEecC
Q 012506 128 TVPVRTVNR 136 (462)
Q Consensus 128 ~~p~~~v~~ 136 (462)
|.+.|+.
T Consensus 98 --p~~~v~h 104 (323)
T PRK14878 98 --PLVPVNH 104 (323)
T ss_pred --Cccccch
Confidence 4555443
No 257
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.32 E-value=38 Score=35.55 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC-CCcceEEe-----cCCCchHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVPVRTV-----NRQCSSGLQAVADVAA 150 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp-~~~p~~~v-----~~~CsSgl~Ai~~Aa~ 150 (462)
-...+++++|+++|+++++||.+.. |+.+... .......+...+|-. ...|+..+ ....++|+..+..++.
T Consensus 290 ~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~--d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTPEQIDYINAHGTSTPEN--DKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCccCcch--HHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHH
Confidence 3568899999999999999999875 3322221 233444444445521 12333322 2345677777777888
Q ss_pred HHHccC
Q 012506 151 AIKAGF 156 (462)
Q Consensus 151 ~I~sG~ 156 (462)
.++.|.
T Consensus 368 ~l~~~~ 373 (425)
T PRK06501 368 TIQTGR 373 (425)
T ss_pred HHhcCc
Confidence 888875
No 258
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=46.80 E-value=27 Score=35.29 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.+.+...++++|+.+|++++|||.|.++.-.+... -+...++.++..+++ |.+.|+.
T Consensus 46 ~~~l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~----p~~~v~h 105 (322)
T TIGR03722 46 AEVAPKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK----PLVGVNH 105 (322)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC----Ceechhh
Confidence 44466779999999999999999999976432221 022346666666766 5555533
No 259
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=46.69 E-value=28 Score=35.38 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=45.0
Q ss_pred ccCCCCCCCCC---CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 63 CKSKRGGFKDT---YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 63 ~~~~~g~~~d~---~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.+.+.|-.+.. .-.+-+...++++|+++|++.+|||.|.+..-.+-.. -|.+.++.++..++. |.+-||-
T Consensus 35 h~~~GGVvPe~Asr~H~e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~k----Pli~VnH 110 (342)
T COG0533 35 HARYGGVVPELASRHHVENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNK----PLIPVNH 110 (342)
T ss_pred cCCCCCcCccHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCC----CEeecch
Confidence 33333444443 3355677889999999999999999999854322111 123467777777766 5555554
No 260
>PRK09604 UGMP family protein; Validated
Probab=44.98 E-value=27 Score=35.52 Aligned_cols=59 Identities=14% Similarity=0.155 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.-.+.+...++++|+.+++++++||.|.++.-.+.+. -+-..++.++..+++ |.+.|+.
T Consensus 50 ~H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~h 111 (332)
T PRK09604 50 AHVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeecC
Confidence 3467888899999999999999999999976433322 012345556666665 5666543
No 261
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=44.98 E-value=60 Score=34.18 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCC--------CchHHHHHHHHHHH
Q 012506 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ--------CSSGLQAVADVAAA 151 (462)
Q Consensus 80 ~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~--------CsSgl~Ai~~Aa~~ 151 (462)
..+++++|+++|++++|||.+.+-..+ ....-.....+|++. .++ .++.+ .+||...+..+...
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~eaF------a~~~l~~~~~lg~~~-~~v-N~~GG~ia~GHp~GaTGa~~v~~ll~q 389 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEAF------AVVAEKFIRDLDLDR-DKV-NVNGGAIALGHPIGATGSILIGTVLDE 389 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchHH------HHHHHHHHHHcCCCh-hhc-cccCCHHhcCCchhHHHHHHHHHHHHH
Confidence 468899999999999999998753211 112223445678753 232 22222 44555555555555
Q ss_pred H-HccCCCEE
Q 012506 152 I-KAGFYDIG 160 (462)
Q Consensus 152 I-~sG~~d~v 160 (462)
+ +.| ...+
T Consensus 390 L~~~g-~~~G 398 (417)
T PRK06025 390 LERRG-LKRG 398 (417)
T ss_pred HHHhC-CCeE
Confidence 4 444 3433
No 262
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=44.59 E-value=63 Score=34.07 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++.+|+++||+++|||.+-+=..+. .......-..|++.. | +++ +-..+||+..+..+..++
T Consensus 36 ~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V--------~~~CaSG~~ai~~A~~~I 107 (427)
T PRK09268 36 TAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDL--------QQACGTGLEAAILVANKI 107 (427)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeee--------echhhHHHHHHHHHHHHH
Confidence 5789999999999999999887632211 011222233455431 2 222 334678888888898888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+-... +..|+
T Consensus 108 ~sG~~--d~vlv 117 (427)
T PRK09268 108 ALGQI--DSGIA 117 (427)
T ss_pred HCCCC--CEEEE
Confidence 86544 56555
No 263
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=43.89 E-value=50 Score=33.88 Aligned_cols=68 Identities=19% Similarity=0.281 Sum_probs=45.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccH-------HHHHHHHcCCCCC--cceEEecCC
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASE-------CRMAAFYAGFPET--VPVRTVNRQ 137 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~-------a~~~a~~~Glp~~--~p~~~v~~~ 137 (462)
+...+..||....+.+++++++++.+|+|.|+=++-...+...+.. -..-++.+|+|+. +|.+++++-
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni 136 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPEEVGEMIKALADGCLKAGVPPSKMTPAMSKENI 136 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHHHHHHHHHHHHhHHHhcCCCchhcCCccCchhc
Confidence 4567889999999999999999999999988754322222111111 1123446788753 677777664
No 264
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=42.13 E-value=30 Score=35.44 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~ 136 (462)
.-.+-+...++++|+++++.+++||.|.+..-.+... -|...++-++..++. |.+-|+.
T Consensus 48 ~H~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~----PligV~H 109 (345)
T PTZ00340 48 HHREHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGK----PLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCC----CEeecch
Confidence 3466778899999999999999999999865433211 023456666666666 6666654
No 265
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=42.08 E-value=38 Score=32.58 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEe
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~ 104 (462)
.+.....++++|+.++++.+|||.+++-.
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTK 78 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTK 78 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcC
Confidence 45677788999999999999999998843
No 266
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=39.38 E-value=38 Score=33.97 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=48.7
Q ss_pred HHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC---------------cceEEecCCCc-hHHH
Q 012506 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET---------------VPVRTVNRQCS-SGLQ 143 (462)
Q Consensus 80 ~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~---------------~p~~~v~~~Cs-Sgl~ 143 (462)
++++.+-|+|.|.+|++-|.|+.|-.-. -|..+.+.+...-|+... -.++.-..+|+ |...
T Consensus 206 ~dTI~~h~~D~g~~p~dYDlIvTGDLg~---vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V 282 (329)
T PF07451_consen 206 ADTIEQHFKDTGRSPDDYDLIVTGDLGK---VGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVV 282 (329)
T ss_dssp HHHHHHHHHHCT--GGG-SEEEESS-HH---HHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhcCeEEecchHH---HHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHH
Confidence 3455666889999999999999864211 133344444444554211 12222233453 5555
Q ss_pred HHHHHHHHHHccCCCEEEEEeecCC
Q 012506 144 AVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 144 Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
........++.|+++.+|+++.-..
T Consensus 283 ~~g~ll~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 283 LCGYLLPKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHHCHHHHHHTTS-SEEEEEEEEE-
T ss_pred HHHHHHHHHHcCCceEEEEEEchhh
Confidence 6677889999999999999987663
No 267
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=37.46 E-value=1.3e+02 Score=25.95 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec--------CCCchHHHHHHHHHH
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN--------RQCSSGLQAVADVAA 150 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~--------~~CsSgl~Ai~~Aa~ 150 (462)
...|++++++++|++++|||.+=+=-. .....-.....+|++. .+ +.++ -..+||..-+...+.
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea------FA~~~l~~~~~lg~~~-~~-vN~~GG~la~GHP~gasG~r~~~~l~~ 95 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA------FAAQVLAFLEALGLDP-EK-VNPNGGALALGHPLGASGARLVVELAH 95 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S------BHHHHHHHHHHHTTGG-GG-BSTT--HHHH-BHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch------hhhHHHHhhccccccc-cc-cCcccccccccccccccccchhhhhHH
Confidence 357899999999999999998766221 1122223344577742 11 1111 123466666666777
Q ss_pred HHHccCCCEEEEE
Q 012506 151 AIKAGFYDIGIGA 163 (462)
Q Consensus 151 ~I~sG~~d~vLv~ 163 (462)
.++....+.+++.
T Consensus 96 ~L~~~~~~~gla~ 108 (123)
T PF02803_consen 96 QLRRRGGRYGLAA 108 (123)
T ss_dssp HHHHHTTSEEEEE
T ss_pred HHHHhchhhhhHH
Confidence 7766555555553
No 268
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=36.87 E-value=1e+02 Score=31.99 Aligned_cols=75 Identities=8% Similarity=-0.045 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+++++|+++||+++|||.+-+=..+. .......-..||+.. | +++ +-..+||+..+..+.+.
T Consensus 31 ~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV--------~~~CaSG~~Ai~~A~~~ 102 (390)
T PRK06504 31 AQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSI--------DRQCGSSQQALHFAAQA 102 (390)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEE--------echhhHHHHHHHHHHHH
Confidence 5789999999999999999887733221 111111112266431 2 122 33457888889999888
Q ss_pred HHhcCCCCcEEEE
Q 012506 410 MKRRGRDCRFGVI 422 (462)
Q Consensus 410 L~~~~~~~~~gl~ 422 (462)
++-... ++.|+
T Consensus 103 I~sG~~--dvvLa 113 (390)
T PRK06504 103 VMSGTM--DIVIA 113 (390)
T ss_pred HHCCCC--CEEEE
Confidence 886544 56555
No 269
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=35.60 E-value=55 Score=25.98 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=27.2
Q ss_pred cCCCchHHHHHHHHHHHHHccCCCEEEEEee
Q 012506 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165 (462)
Q Consensus 135 ~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~ 165 (462)
-..++||...-..+..+++.|.+|.||+++.
T Consensus 14 r~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~ 44 (82)
T PF04422_consen 14 REKSQSGGVVTALLAYLLESGLVDGVVVVGR 44 (82)
T ss_pred cccCCcHHHHHHHHHHHHHcCCceEEEEEee
Confidence 3567888888899999999999999999984
No 270
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=35.33 E-value=70 Score=29.46 Aligned_cols=82 Identities=20% Similarity=0.141 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++.+|++.++++++|+.+++= |..-+...+..+.||+...+ +.. +.-..--+.|.|.+.+.+...-+...
T Consensus 58 ~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~-~~~-~~e~k~ACygGTaAL~~a~~~v~s~~ 135 (174)
T PF01154_consen 58 ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNP-DCR-GVEMKQACYGGTAALQNAVNWVASSP 135 (174)
T ss_dssp HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-S-SSE-EEEEESGGGHHHHHHHHHHHHHCSTT
T ss_pred HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCC-cee-eeehhhhhHHHHHHHHHHHHHHhcCC
Confidence 468889999999999999999974 66667788888999995321 111 11112234555555554444333322
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
..+ +++|+-
T Consensus 136 ~~g--~~aLVV 144 (174)
T PF01154_consen 136 WDG--RKALVV 144 (174)
T ss_dssp STT--EEEEEE
T ss_pred CCC--CeEEEE
Confidence 223 677764
No 271
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=34.57 E-value=1e+02 Score=31.40 Aligned_cols=28 Identities=25% Similarity=0.450 Sum_probs=24.0
Q ss_pred HHHHHHHHHHcCC-CCCCccEEEecCCCH
Q 012506 338 AVAIPAAVKSAGL-QLDDIDLFEINEAFA 365 (462)
Q Consensus 338 ~~Ai~~aL~~AGl-~~~DID~~eihdafa 365 (462)
+.++++++++||| +|+|+.|+++--+..
T Consensus 135 A~aV~~aM~~AGI~dpaDVH~VQvKcPLL 163 (365)
T PF09663_consen 135 AAAVRAAMADAGITDPADVHFVQVKCPLL 163 (365)
T ss_pred HHHHHHHHHHcCCCChhheeeEEecCCcC
Confidence 5799999999999 899999999865543
No 272
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=34.19 E-value=97 Score=30.27 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCC-CC-CCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPE-KI-NVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~-~v-n~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++.+|+++||+++|||.+.+=.... .......-..||+.. |. ++ +-.-+||+..+..+...+
T Consensus 31 ~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V--------~~~CaSG~~Av~~a~~~I 102 (264)
T PF00108_consen 31 AEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTV--------NRACASGLQAVHLAAMAI 102 (264)
T ss_dssp HHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEE--------E-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeee--------hhhhhHHHHHHHHhhhhh
Confidence 5789999999999999999887632222 123344445788754 21 22 223478888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+-... +..|+
T Consensus 103 ~sG~~--dvvla 112 (264)
T PF00108_consen 103 ASGEA--DVVLA 112 (264)
T ss_dssp HTTS---SEEEE
T ss_pred cCCCc--cEEEE
Confidence 86433 55555
No 273
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=32.83 E-value=1e+02 Score=31.80 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=44.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcc-ccCcEEEEeccCCCCcccc----HH---HHHHHHcCCCCC--cceEEecCC
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPS-EVGDIVVGTVLAPGSQRAS----EC---RMAAFYAGFPET--VPVRTVNRQ 137 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~-~Id~vivG~~~~~~~~~~~----~a---~~~a~~~Glp~~--~p~~~v~~~ 137 (462)
+...+..||..+.+.+++++++++.+ |+|.|+=++-...+...+. .- ..-++.+|+|+. +|.+++++.
T Consensus 62 LTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni 139 (448)
T PF09887_consen 62 LTRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRKMTPPMSKNNI 139 (448)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHHHHHHHHHHHHhhHHhcCCChhhcCCccchhhc
Confidence 45568999999999999999999987 9998875432222111111 11 122446788753 677777664
No 274
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=29.68 E-value=1e+02 Score=26.37 Aligned_cols=59 Identities=8% Similarity=0.121 Sum_probs=35.5
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
++++|.|. + ++.+. +...+++.++|++.++++..|+.+..-..-.+- ..-..++..+|+
T Consensus 1 ~l~~GiGc----r------r~~~~-~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~~E----~~l~~~A~~l~~ 59 (121)
T PF01890_consen 1 NLVLGIGC----R------RGAPA-EEIEEAIEQALAEAGLSPRSIAAIASIDIKADE----PGLLELAEELGI 59 (121)
T ss_dssp -EEEEEEE-----------SS--H-HHHHHHHHHHHHHCT--GGGEEEEEESSSSS------HHHHHHHHHCTS
T ss_pred CEEEEeCc----C------CCCCH-HHHHHHHHHHHHHcCCChhhccEEEeccccCCC----HHHHHHHHHhCC
Confidence 36788875 2 45544 555889999999999999999988764432221 123355667776
No 275
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=29.12 E-value=52 Score=35.61 Aligned_cols=50 Identities=16% Similarity=0.284 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGF 125 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Gl 125 (462)
.+.+..+++++|+++++++++||.|.++.-.+... -|...++.++..+++
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~ 101 (535)
T PRK09605 49 AEAIPKVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV 101 (535)
T ss_pred HHHHHHHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC
Confidence 44566899999999999999999999975433221 022345556666665
No 276
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=28.56 E-value=45 Score=25.65 Aligned_cols=27 Identities=37% Similarity=0.505 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
...|+..++.+|-=+.++||+||+-|.
T Consensus 19 ~d~Ai~~Ai~RA~~t~~~l~wfeV~~~ 45 (71)
T COG3360 19 IDAAIANAIARAADTLDNLDWFEVVET 45 (71)
T ss_pred HHHHHHHHHHHHHhhhhcceEEEEEee
Confidence 357899999999999999999998763
No 277
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=28.14 E-value=4.4e+02 Score=27.29 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCC-cceE-----EecCCCchHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPET-VPVR-----TVNRQCSSGLQAVADVA 149 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~-~p~~-----~v~~~CsSgl~Ai~~Aa 149 (462)
+-...++++||+++++ ++||.|.. |+-+... .......+...+|-... .|+. .-...+++|...+..++
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~--D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~ 349 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYN--DKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISI 349 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCC--CHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHH
Confidence 4456899999999998 68887643 3322222 23344445555553111 2222 22445677777777778
Q ss_pred HHHHccC
Q 012506 150 AAIKAGF 156 (462)
Q Consensus 150 ~~I~sG~ 156 (462)
.+++.|.
T Consensus 350 ~~l~~~~ 356 (406)
T PRK08439 350 MAMRDGI 356 (406)
T ss_pred HHHhCCe
Confidence 8888874
No 278
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=27.59 E-value=2e+02 Score=29.74 Aligned_cols=75 Identities=4% Similarity=-0.013 Sum_probs=47.2
Q ss_pred HHHHHHHHHH-cCCCCCCccEEEecCCC---H---HHHHHHHHHcCCCCCC--CCCCCCccccCCccchHHHHHHHHHHH
Q 012506 338 AVAIPAAVKS-AGLQLDDIDLFEINEAF---A---SQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 338 ~~Ai~~aL~~-AGl~~~DID~~eihdaf---a---~~~~~~~e~LGl~~~~--vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
..+++.+|++ +||+++|||.+-+=..+ . ..........|++... +++ +-..+||+..+..+..
T Consensus 30 ~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV--------~~~CaSG~~Ai~~Aa~ 101 (385)
T TIGR02445 30 AHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTV--------NRLCGSSMQALHDAAR 101 (385)
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhh--------hhhhHHHHHHHHHHHH
Confidence 5789999997 59999999988663221 1 1112222345776531 222 2345788888888888
Q ss_pred HHHhcCCCCcEEEE
Q 012506 409 EMKRRGRDCRFGVI 422 (462)
Q Consensus 409 qL~~~~~~~~~gl~ 422 (462)
.++-... +..|+
T Consensus 102 ~I~sG~~--d~vla 113 (385)
T TIGR02445 102 AIMTGDA--DVCLV 113 (385)
T ss_pred HHHCCCC--CEEEE
Confidence 8875433 56655
No 279
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=25.90 E-value=3e+02 Score=36.10 Aligned_cols=104 Identities=19% Similarity=0.239 Sum_probs=63.9
Q ss_pred CCcE--EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCC
Q 012506 49 GDDV--VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 49 ~~~v--~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
.++| +|.|.+.+--++. + ++-..++.-. .+++++|++++|+++++||.|-. |+-+..+ .+.....+...+|-
T Consensus 288 Gd~IyAvI~G~g~~~DG~~-~-~itaP~~~gq-~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g--D~~E~~Al~~vf~~ 362 (2582)
T TIGR02813 288 GDRIYAVIKGVGASSDGKF-K-SIYAPRPEGQ-AKALKRAYDDAGFAPHTCGLIEAHGTGTAAG--DVAEFGGLVSVFSQ 362 (2582)
T ss_pred CCcEEEEEEEEEEcCCCCC-C-CCcCCCHHHH-HHHHHHHHHHcCCCHHHCCEEEecCCCCCCC--CHHHHHHHHHHhcc
Confidence 3444 6888887655542 1 1222334443 68999999999999999998753 4433322 23445555555543
Q ss_pred C----CCcceEEe-----cCCCchHHHHHHHHHHHHHccCC
Q 012506 126 P----ETVPVRTV-----NRQCSSGLQAVADVAAAIKAGFY 157 (462)
Q Consensus 126 p----~~~p~~~v-----~~~CsSgl~Ai~~Aa~~I~sG~~ 157 (462)
. ..+++-.+ ...+++|+..+.-++.+++.|.+
T Consensus 363 ~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 363 DNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred cccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 1 11222222 33478899999999999988854
No 280
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.23 E-value=55 Score=33.59 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCC
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
=+..+++++|+++||.|+|||.|=. .+.++.+ ....+..+...++-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G--D~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLG--DAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCc--hHHHHHHHHHHhcc
Confidence 3456889999999999999998753 2222222 23345555555544
No 281
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=22.72 E-value=1.3e+02 Score=25.88 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=39.8
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
.+++|.|. + ++.++++ ..++++++|++.++++..|+.+..-..-.+- ..-..++..+|+|
T Consensus 3 ~~~vGIGc----r------~~~~~e~-i~~ai~~~L~~~~l~~~si~~lasi~~K~~E----~~L~~~A~~lg~p 62 (126)
T PRK07027 3 RVALGIGC----R------RGVPAEQ-IEAAIRAALAQRPLASADVRVVATLDLKADE----AGLLALCARHGWP 62 (126)
T ss_pred cEEEeecc----C------CCCCHHH-HHHHHHHHHHHcCCCHHHhheeEehhhhcCC----HHHHHHHHHhCCC
Confidence 45788875 2 4555555 5889999999999999999888653332211 1123566677874
No 282
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=22.18 E-value=69 Score=32.66 Aligned_cols=25 Identities=32% Similarity=0.525 Sum_probs=21.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
...++++|++||++.+|||.+-.-.
T Consensus 55 ~~li~~al~eA~~~~~dID~IA~T~ 79 (342)
T COG0533 55 PPLIEEALAEAGVSLEDIDAIAVTA 79 (342)
T ss_pred HHHHHHHHHHcCCCcccCCEEEEec
Confidence 4688999999999999999997643
No 283
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=21.93 E-value=52 Score=25.43 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=24.3
Q ss_pred CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 334 ~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
+..|..-+..+.+.+|++.+||.-+++++.|+..
T Consensus 12 g~~~~~iv~~i~~~~gi~~~~IG~I~I~~~~S~v 45 (74)
T PF03880_consen 12 GLTPRDIVGAICNEAGIPGRDIGRIDIFDNFSFV 45 (74)
T ss_dssp T--HHHHHHHHHTCTTB-GGGEEEEEE-SS-EEE
T ss_pred CCCHHHHHHHHHhccCCCHHhEEEEEEeeeEEEE
Confidence 3456667777888889999999999999999864
No 284
>PRK13410 molecular chaperone DnaK; Provisional
Probab=21.18 E-value=2.3e+02 Score=31.85 Aligned_cols=53 Identities=13% Similarity=0.248 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCC
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~ 137 (462)
+.+.++++|+++|+++++||.|++. +.++.-|..-..+...+|.+ +..++|.-
T Consensus 311 ~~~~i~~~L~~ag~~~~dId~VvLV---GGssRiP~V~~~l~~~fg~~---~~~~~npd 363 (668)
T PRK13410 311 LLRPVKRALKDAGLSPEDIDEVVLV---GGSTRMPMVQQLVRTLIPRE---PNQNVNPD 363 (668)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEE---CCccccHHHHHHHHHHcCCC---cccCCCCc
Confidence 4456778999999999999998762 22222455666777777763 44555554
No 285
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=21.16 E-value=2.4e+02 Score=31.65 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 80 ~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
...++++|+++++++++||.|++. +.+..-|..-..+...+|-+ +...+|.-.
T Consensus 337 ~~~v~~~L~~a~~~~~dId~VvLV---GGssriP~V~~~l~~~fg~~---~~~~~nPde 389 (657)
T PTZ00186 337 IAPCKQCMKDAGVELKEINDVVLV---GGMTRMPKVVEEVKKFFQKD---PFRGVNPDE 389 (657)
T ss_pred HHHHHHHHHHcCCChhhCCEEEEE---CCcccChHHHHHHHHHhCCC---ccccCCCch
Confidence 445778899999999999998862 22222455667788888762 444555543
No 286
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=20.63 E-value=74 Score=30.67 Aligned_cols=23 Identities=30% Similarity=0.385 Sum_probs=20.5
Q ss_pred HHHHHHHHHcCCCCCCccEEEec
Q 012506 339 VAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 339 ~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..++++|++++++.+|||.+-.-
T Consensus 55 ~Lv~~al~ea~v~~~diD~icyT 77 (336)
T KOG2708|consen 55 GLVKQALEEAGVTSDDIDCICYT 77 (336)
T ss_pred HHHHHHHHHcCCChhhCCEEEEc
Confidence 57889999999999999999754
No 287
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=20.57 E-value=4.8e+02 Score=23.88 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=32.4
Q ss_pred HHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHH-cCCCCCcceEE-ecCCCchHHHHHHHHHHH
Q 012506 83 LKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY-AGFPETVPVRT-VNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 83 ~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~-~Glp~~~p~~~-v~~~CsSgl~Ai~~Aa~~ 151 (462)
++++|+++.= +.++.|++-- .++++ ....+..+... ...| .|++. |+..|.|+..-|..+++.
T Consensus 18 l~~~l~~a~~--~~~~~ivl~i-nspGG-~v~~~~~I~~~l~~~~--~pvva~V~g~AaSaG~~ia~a~d~ 82 (178)
T cd07021 18 VERALKEAKE--EGADAVVLDI-DTPGG-RVDSALEIVDLILNSP--IPTIAYVNDRAASAGALIALAADE 82 (178)
T ss_pred HHHHHHHHHh--CCCCeEEEEE-ECcCC-CHHHHHHHHHHHHhCC--CCEEEEECCchHHHHHHHHHhCCe
Confidence 3444444432 2266666633 33332 23334444444 3443 56665 566688887777776544
No 288
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=20.40 E-value=3.2e+02 Score=27.58 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=29.7
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEe
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~ 104 (462)
+.+|+|+|.+-| .-+||++ +.++++++|.++-.||.-+.++
T Consensus 2 ~krIyVvgT~DT-------------Kg~EL~y--lad~I~~aG~~~v~vDvs~~~~ 42 (401)
T COG5441 2 MKRIYVVGTADT-------------KGEELAY--LADLIEAAGGSPVLVDVSTLRN 42 (401)
T ss_pred CceEEEEecCCC-------------cchhHHH--HHHHHHHcCCCeEEEEeeccCC
Confidence 468999986543 3467877 4588999999998887655543
No 289
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.03 E-value=2.2e+02 Score=27.21 Aligned_cols=64 Identities=20% Similarity=0.108 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
+++.++++|+..=....-+..-+.-..+|.|++|+..+....|+..-..++..+---..+|+++
T Consensus 41 l~~VT~EeL~~M~~~t~~aAl~Lada~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie~~~~v~vvT 104 (238)
T COG3473 41 LKNVTPEELLKMESYTERAALELADAGVDVIVYGCTSGSLIGGPGYDKEIAQRIEEAKGVPVVT 104 (238)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCccccCEEEEeccceeeecCCchhHHHHHHHHhccCCceee
Confidence 4678999987654322222234556778899999887766545433333333322111345555
No 290
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=20.01 E-value=2.3e+02 Score=24.34 Aligned_cols=49 Identities=20% Similarity=0.315 Sum_probs=31.4
Q ss_pred HHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 83 LKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 83 ~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+.+.+++.+++++||-.+++ +++++.. ...++..+-...|+ ..+|.+..
T Consensus 26 l~~ii~~N~l~~edivSv~F-T~T~DL~-a~FPA~aaR~~~Gw-~~Vplmc~ 74 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIF-TVTEDLH-ADFPAAAARGLPGW-TDVPVMCA 74 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEE-EecCccc-ccChHHHHHhccCC-CCcceecc
Confidence 34556778999999988888 4456654 33444443334488 57777653
Done!