Query 012506
Match_columns 462
No_of_seqs 210 out of 1833
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 10:46:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012506.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012506hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wu9_A 3-ketoacyl-COA thiolase 100.0 4.7E-78 1.6E-82 629.6 40.5 426 36-461 16-441 (442)
2 2iik_A 3-ketoacyl-COA thiolase 100.0 1.5E-74 5.1E-79 600.4 41.4 387 49-439 29-416 (418)
3 3goa_A 3-ketoacyl-COA thiolase 100.0 3.8E-74 1.3E-78 591.9 42.1 381 49-438 1-386 (387)
4 3svk_A Acetyl-COA acetyltransf 100.0 1.8E-73 6.1E-78 590.2 38.4 377 48-438 5-406 (407)
5 4dd5_A Acetyl-COA acetyltransf 100.0 1.6E-72 5.4E-77 581.6 42.7 380 49-438 6-396 (396)
6 3ss6_A Acetyl-COA acetyltransf 100.0 1.9E-72 6.4E-77 580.7 41.0 379 49-438 4-393 (394)
7 1afw_A 3-ketoacetyl-COA thiola 100.0 1E-72 3.5E-77 582.2 38.4 381 45-439 5-393 (393)
8 1ulq_A Putative acetyl-COA ace 100.0 5.5E-72 1.9E-76 578.5 43.0 381 50-439 2-400 (401)
9 1wl4_A Acetyl-coenzyme A acety 100.0 2E-71 7E-76 573.5 42.9 381 49-439 5-397 (397)
10 4e1l_A Acetoacetyl-COA thiolas 100.0 1.6E-71 5.5E-76 573.9 40.2 381 49-438 4-395 (395)
11 2vu1_A Acetyl-COA acetyltransf 100.0 6.1E-71 2.1E-75 569.1 42.1 380 49-438 2-391 (392)
12 1wdk_C 3-ketoacyl-COA thiolase 100.0 1.3E-70 4.6E-75 566.2 40.7 380 49-438 4-389 (390)
13 2ib8_A Acetyl-COA acetyltransf 100.0 8.1E-68 2.8E-72 546.3 39.6 378 48-438 6-394 (395)
14 4egv_A Acetyl-COA acetyltransf 100.0 6.2E-58 2.1E-62 486.6 24.6 376 49-441 17-425 (520)
15 1e5m_A KAS II, beta ketoacyl a 100.0 6.5E-32 2.2E-36 280.0 28.4 272 77-439 79-415 (416)
16 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 1.2E-31 4.2E-36 278.9 28.0 277 74-439 86-426 (428)
17 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 2.1E-32 7.3E-37 284.6 20.4 273 76-438 89-426 (427)
18 3o04_A LMO2201 protein, beta-k 100.0 3.1E-31 1.1E-35 274.7 27.0 274 75-439 74-411 (413)
19 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 4.4E-32 1.5E-36 280.6 20.3 275 74-438 70-407 (408)
20 3mqd_A Beta-ketoacyl synthase; 100.0 1.4E-30 4.9E-35 270.9 28.1 273 75-440 92-427 (428)
21 2wge_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-30 3.8E-35 270.7 25.0 269 76-438 84-415 (416)
22 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 2.8E-30 9.5E-35 269.4 26.8 274 75-439 98-435 (437)
23 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 3.2E-30 1.1E-34 269.0 25.2 273 75-438 97-437 (438)
24 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 1.5E-30 5.1E-35 271.0 21.3 276 74-438 87-430 (431)
25 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-29 3.9E-34 265.8 28.0 275 75-440 102-443 (451)
26 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-29 5.5E-34 263.3 28.2 271 76-438 100-433 (434)
27 1tqy_B Actinorhodin polyketide 100.0 2.2E-29 7.5E-34 260.9 28.6 272 74-439 78-411 (415)
28 1ox0_A Beta ketoacyl-acyl carr 100.0 2.1E-29 7.2E-34 262.2 26.9 270 76-439 94-427 (430)
29 1tqy_A Beta-ketoacyl synthase/ 100.0 1.4E-29 4.8E-34 263.1 25.1 276 75-440 73-418 (424)
30 4ewg_A Beta-ketoacyl synthase; 100.0 6.2E-30 2.1E-34 264.8 20.6 271 75-439 77-411 (412)
31 2vba_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-27 3.9E-32 247.4 26.4 269 74-439 70-404 (406)
32 2qo3_A Eryaii erythromycin pol 100.0 5.1E-27 1.7E-31 264.1 27.3 272 74-440 94-432 (915)
33 2hg4_A DEBS, 6-deoxyerythronol 100.0 5.4E-27 1.8E-31 263.9 27.4 270 76-440 117-454 (917)
34 1zow_A 3-oxoacyl-[acyl-carrier 99.9 4.7E-27 1.6E-31 233.9 20.3 256 59-437 36-310 (313)
35 2ebd_A 3-oxoacyl-[acyl-carrier 99.9 2.5E-26 8.6E-31 228.1 20.4 242 73-436 48-307 (309)
36 1ub7_A 3-oxoacyl-[acyl-carrier 99.9 1.3E-25 4.5E-30 224.5 22.2 246 71-438 46-319 (322)
37 1u6e_A 3-oxoacyl-[acyl-carrier 99.9 9.5E-26 3.2E-30 226.6 20.4 248 68-438 54-332 (335)
38 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 5.3E-25 1.8E-29 221.5 22.5 255 59-436 50-330 (333)
39 3hhd_A Fatty acid synthase; tr 99.9 1.1E-24 3.9E-29 246.0 27.3 264 76-440 81-410 (965)
40 3zen_D Fatty acid synthase; tr 99.9 3.1E-25 1.1E-29 270.1 21.7 280 75-443 2647-3015(3089)
41 1hnj_A Beta-ketoacyl-acyl carr 99.9 1.8E-24 6E-29 215.8 20.2 242 71-435 47-313 (317)
42 3il3_A 3-oxoacyl-[acyl-carrier 99.9 1.9E-23 6.5E-28 209.4 25.6 243 70-435 53-319 (323)
43 1mzj_A Beta-ketoacylsynthase I 99.9 6.5E-24 2.2E-28 213.9 21.0 245 71-438 56-331 (339)
44 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 1.6E-23 5.3E-28 210.4 18.3 244 73-438 51-323 (331)
45 4efi_A 3-oxoacyl-(acyl-carrier 99.9 5.3E-23 1.8E-27 208.7 22.4 246 71-438 62-343 (354)
46 3s21_A 3-oxoacyl-[ACP] synthas 99.9 7.7E-23 2.6E-27 206.7 22.3 259 71-436 64-342 (345)
47 1u0m_A Putative polyketide syn 99.9 3E-24 1E-28 220.0 12.0 248 72-438 81-354 (382)
48 3gwa_A 3-oxoacyl-(acyl-carrier 99.9 8.3E-23 2.8E-27 208.1 22.6 246 71-436 76-362 (365)
49 2h84_A Steely1; thiolase-fold, 99.9 8.1E-24 2.8E-28 216.0 12.3 246 73-436 93-369 (374)
50 3h78_A PQS biosynthetic enzyme 99.9 2.4E-22 8.2E-27 204.2 22.2 248 70-438 69-351 (359)
51 1ted_A PKS18; thiolase fold, s 99.9 8.4E-24 2.9E-28 217.5 10.6 252 73-437 111-389 (393)
52 2uv8_A Fatty acid synthase sub 99.9 2.8E-22 9.6E-27 234.2 20.2 278 76-440 1212-1659(1887)
53 4ewp_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-21 7.7E-26 196.2 23.4 245 71-437 58-347 (350)
54 2uv9_A Fatty acid synthase alp 99.9 1.6E-21 5.4E-26 227.5 22.0 276 76-440 1187-1640(1878)
55 3s3l_A CERJ; acyltransferase, 99.9 1.6E-21 5.4E-26 198.0 19.2 256 58-439 36-339 (357)
56 2pff_A Fatty acid synthase sub 99.9 6E-23 2.1E-27 232.9 7.5 277 75-440 1012-1460(1688)
57 3led_A 3-oxoacyl-acyl carrier 99.9 1.1E-20 3.7E-25 194.1 23.5 238 74-437 116-390 (392)
58 3tsy_A Fusion protein 4-coumar 99.9 1.2E-20 4.1E-25 214.7 24.1 256 75-438 689-972 (979)
59 3il6_A 3-oxoacyl-[acyl-carrier 99.9 6.2E-20 2.1E-24 183.7 24.3 240 75-436 52-318 (321)
60 2d3m_A Pentaketide chromone sy 99.9 3.6E-20 1.2E-24 191.2 22.8 254 73-438 113-402 (406)
61 3oit_A OS07G0271500 protein; t 99.8 1.2E-19 4.1E-24 186.1 19.3 251 74-438 95-381 (387)
62 3ov2_A Curcumin synthase; type 99.8 3.6E-19 1.2E-23 182.9 22.1 255 74-439 101-387 (393)
63 3euo_A Type III pentaketide sy 99.8 1.2E-19 4E-24 185.7 17.5 256 74-436 80-375 (379)
64 3v7i_A Putative polyketide syn 99.8 1.3E-18 4.4E-23 179.5 25.0 253 58-436 122-409 (413)
65 3a5r_A Benzalacetone synthase; 99.8 6.1E-19 2.1E-23 180.8 22.1 254 73-439 96-383 (387)
66 3awk_A Chalcone synthase-like 99.8 9.8E-19 3.3E-23 180.2 23.6 254 73-438 113-399 (402)
67 1i88_A CHS2, chalcone synthase 99.8 8.3E-19 2.8E-23 180.0 22.8 253 73-437 100-385 (389)
68 2p0u_A Stilbenecarboxylate syn 99.8 3.8E-19 1.3E-23 183.9 20.3 254 73-438 118-404 (413)
69 1ee0_A 2-pyrone synthase; poly 99.8 6.5E-19 2.2E-23 181.5 21.3 253 73-438 105-391 (402)
70 1xes_A Dihydropinosylvin synth 99.8 1.8E-18 6E-23 178.9 24.2 253 74-438 124-409 (413)
71 3e1h_A PKSIIINC, putative unch 99.8 1.9E-19 6.5E-24 188.1 16.2 256 76-438 111-407 (465)
72 2vz8_A Fatty acid synthase; tr 99.8 4.2E-19 1.4E-23 216.9 21.6 264 76-440 79-408 (2512)
73 3lma_A Stage V sporulation pro 99.8 7.3E-20 2.5E-24 182.2 12.2 251 73-444 53-339 (347)
74 1xpm_A 3-hydroxy-3-methylgluta 99.8 9.5E-20 3.3E-24 187.4 12.7 248 71-445 47-325 (396)
75 2f82_A HMG-COA synthase; HMGS1 99.8 2.9E-18 9.9E-23 179.2 19.3 98 71-169 48-149 (450)
76 2v4w_A Hydroxymethylglutaryl-C 99.8 1.1E-18 3.8E-23 181.4 14.2 113 52-169 35-151 (460)
77 3v4n_A HMG-COA synthase; hydro 99.7 4.3E-18 1.5E-22 174.4 12.2 244 71-443 52-329 (388)
78 3sqz_A Putative hydroxymethylg 99.7 8.5E-18 2.9E-22 173.9 13.0 244 71-443 81-359 (425)
79 2p8u_A Hydroxymethylglutaryl-C 99.7 1.8E-16 6E-21 166.6 14.6 112 50-167 52-168 (478)
80 2wya_A Hydroxymethylglutaryl-C 99.5 9.3E-14 3.2E-18 145.4 11.1 95 71-166 50-146 (460)
81 4ewp_A 3-oxoacyl-[acyl-carrier 92.5 0.63 2.2E-05 45.8 10.6 77 338-423 67-148 (350)
82 3lma_A Stage V sporulation pro 91.3 0.43 1.5E-05 47.3 7.7 88 78-168 208-310 (347)
83 3euo_A Type III pentaketide sy 88.5 0.97 3.3E-05 45.3 7.8 44 338-381 86-133 (379)
84 3e1h_A PKSIIINC, putative unch 87.1 1.3 4.4E-05 45.8 7.8 43 338-380 115-161 (465)
85 3s21_A 3-oxoacyl-[ACP] synthas 85.7 1.4 4.6E-05 43.4 6.9 82 78-167 247-334 (345)
86 3h78_A PQS biosynthetic enzyme 84.8 1.2 4.1E-05 44.3 6.1 83 77-167 254-340 (359)
87 3gwa_A 3-oxoacyl-(acyl-carrier 83.7 2.6 8.7E-05 41.9 7.9 82 77-167 266-354 (365)
88 1zow_A 3-oxoacyl-[acyl-carrier 83.5 2.2 7.5E-05 40.9 7.2 81 78-167 213-300 (313)
89 2x3e_A 3-oxoacyl-[acyl-carrier 82.8 2.2 7.4E-05 41.5 6.9 82 77-167 224-312 (331)
90 3v7i_A Putative polyketide syn 82.5 2.9 0.0001 42.3 7.9 42 338-379 142-187 (413)
91 3ov2_A Curcumin synthase; type 82.5 2.5 8.7E-05 42.4 7.4 43 338-380 107-153 (393)
92 3il6_A 3-oxoacyl-[acyl-carrier 82.4 2.2 7.7E-05 41.4 6.8 42 338-379 57-103 (321)
93 1u6e_A 3-oxoacyl-[acyl-carrier 82.4 2.6 8.7E-05 40.9 7.2 82 77-167 232-321 (335)
94 1mzj_A Beta-ketoacylsynthase I 82.0 2.8 9.4E-05 40.9 7.3 82 77-167 231-320 (339)
95 3awk_A Chalcone synthase-like 81.6 2.6 9E-05 42.4 7.2 43 338-380 120-166 (402)
96 1i88_A CHS2, chalcone synthase 81.4 2.7 9.4E-05 41.9 7.2 43 338-380 107-153 (389)
97 3led_A 3-oxoacyl-acyl carrier 80.9 2.4 8.1E-05 42.7 6.5 93 338-440 122-235 (392)
98 3a5r_A Benzalacetone synthase; 80.8 2.8 9.6E-05 41.8 7.0 43 338-380 103-149 (387)
99 2p0u_A Stilbenecarboxylate syn 80.7 2.9 9.8E-05 42.3 7.1 43 338-380 125-171 (413)
100 1ee0_A 2-pyrone synthase; poly 80.7 2.8 9.6E-05 42.1 7.0 43 338-380 112-158 (402)
101 1hnj_A Beta-ketoacyl-acyl carr 80.4 3.6 0.00012 39.5 7.5 80 78-167 219-306 (317)
102 3oit_A OS07G0271500 protein; t 80.3 3 0.0001 41.8 7.1 78 338-422 101-182 (387)
103 1u0m_A Putative polyketide syn 80.3 4.2 0.00014 40.5 8.1 76 338-423 89-171 (382)
104 4e1l_A Acetoacetyl-COA thiolas 80.2 4.6 0.00016 40.3 8.4 78 338-423 34-116 (395)
105 4dfe_A 3-oxoacyl-[acyl-carrier 78.9 4.3 0.00015 39.5 7.5 82 77-167 234-322 (333)
106 2ebd_A 3-oxoacyl-[acyl-carrier 78.9 3.4 0.00012 39.5 6.7 95 338-441 55-170 (309)
107 1xes_A Dihydropinosylvin synth 78.7 2.8 9.5E-05 42.4 6.2 43 338-380 130-176 (413)
108 4efi_A 3-oxoacyl-(acyl-carrier 78.5 4.1 0.00014 40.1 7.3 83 77-167 244-332 (354)
109 2d3m_A Pentaketide chromone sy 78.4 3.3 0.00011 41.7 6.6 43 338-380 120-166 (406)
110 4dd5_A Acetyl-COA acetyltransf 78.3 5.9 0.0002 39.6 8.5 78 338-423 36-118 (396)
111 2iik_A 3-ketoacyl-COA thiolase 78.2 9.1 0.00031 38.6 9.9 78 338-423 60-142 (418)
112 3il3_A 3-oxoacyl-[acyl-carrier 77.8 4.7 0.00016 39.2 7.4 82 77-167 224-312 (323)
113 1ted_A PKS18; thiolase fold, s 77.0 4 0.00014 40.8 6.8 82 77-167 287-379 (393)
114 2v4w_A Hydroxymethylglutaryl-C 77.0 2.9 0.0001 43.0 5.8 81 338-423 59-145 (460)
115 2h84_A Steely1; thiolase-fold, 76.9 5 0.00017 39.6 7.4 42 338-379 100-145 (374)
116 1ub7_A 3-oxoacyl-[acyl-carrier 76.9 5.2 0.00018 38.5 7.4 76 338-423 55-135 (322)
117 2gel_A Putative GRAM negative 76.4 2.5 8.5E-05 39.3 4.7 65 74-148 33-101 (231)
118 3tsy_A Fusion protein 4-coumar 76.2 5.1 0.00017 44.9 8.1 84 78-167 865-962 (979)
119 2wya_A Hydroxymethylglutaryl-C 74.3 9.8 0.00034 38.9 9.0 80 338-422 59-144 (460)
120 2a6a_A Hypothetical protein TM 74.2 2.3 7.9E-05 39.2 3.8 57 74-135 44-104 (218)
121 2f82_A HMG-COA synthase; HMGS1 73.9 9 0.00031 39.1 8.6 40 338-377 57-101 (450)
122 3s3l_A CERJ; acyltransferase, 73.8 6.3 0.00021 38.9 7.2 41 338-378 59-105 (357)
123 3r6m_A YEAZ, resuscitation pro 73.3 2.4 8.3E-05 38.9 3.7 65 74-148 34-102 (213)
124 3ss6_A Acetyl-COA acetyltransf 72.9 8.2 0.00028 38.5 7.9 78 338-423 34-116 (394)
125 2wu9_A 3-ketoacyl-COA thiolase 68.5 19 0.00066 36.5 9.6 78 338-423 60-143 (442)
126 2p8u_A Hydroxymethylglutaryl-C 68.4 18 0.0006 37.3 9.3 40 338-377 78-122 (478)
127 3goa_A 3-ketoacyl-COA thiolase 65.4 18 0.0006 36.0 8.4 76 338-423 32-116 (387)
128 1j3n_A 3-oxoacyl-(acyl-carrier 65.1 6.3 0.00021 39.5 5.1 99 52-156 253-359 (408)
129 1ulq_A Putative acetyl-COA ace 64.5 12 0.00042 37.3 7.1 78 338-423 31-114 (401)
130 3svk_A Acetyl-COA acetyltransf 63.9 6.5 0.00022 39.6 4.9 76 338-423 37-121 (407)
131 3ho9_A 3-oxoacyl-[acyl-carrier 63.9 7.6 0.00026 39.2 5.4 100 52-156 270-376 (427)
132 3kzu_A 3-oxoacyl-(acyl-carrier 61.3 20 0.00067 36.2 8.0 99 52-156 271-376 (428)
133 1wl4_A Acetyl-coenzyme A acety 60.1 20 0.00067 35.7 7.7 78 338-423 35-117 (397)
134 1tqy_A Beta-ketoacyl synthase/ 59.1 19 0.00066 36.1 7.5 101 52-156 261-367 (424)
135 4ewg_A Beta-ketoacyl synthase; 58.2 16 0.00053 36.6 6.6 96 52-156 259-360 (412)
136 4egv_A Acetyl-COA acetyltransf 57.6 39 0.0013 35.1 9.6 83 77-165 317-408 (520)
137 2gqd_A 3-oxoacyl-[acyl-carrier 57.6 44 0.0015 33.6 9.9 76 338-423 103-213 (437)
138 1tqy_B Actinorhodin polyketide 57.2 17 0.00057 36.4 6.6 96 52-156 260-361 (415)
139 1e5m_A KAS II, beta ketoacyl a 56.6 50 0.0017 32.9 10.0 76 338-423 82-192 (416)
140 2vu1_A Acetyl-COA acetyltransf 54.9 17 0.00057 36.2 6.1 78 338-423 32-114 (392)
141 2ib8_A Acetyl-COA acetyltransf 53.2 27 0.00094 34.5 7.4 78 338-423 37-119 (395)
142 4ddo_A 3-oxoacyl-[acyl-carrier 52.6 24 0.00083 35.7 7.0 76 78-156 309-391 (451)
143 1wdk_C 3-ketoacyl-COA thiolase 51.9 21 0.00072 35.4 6.3 78 338-423 35-119 (390)
144 1afw_A 3-ketoacetyl-COA thiola 51.3 37 0.0013 33.7 8.0 76 338-423 40-126 (393)
145 1ox0_A Beta ketoacyl-acyl carr 50.7 83 0.0028 31.4 10.6 19 338-356 98-116 (430)
146 3o04_A LMO2201 protein, beta-k 50.2 77 0.0026 31.4 10.2 76 338-423 79-189 (413)
147 2iwz_A 3-oxoacyl-[acyl-carrier 49.8 29 0.00099 35.0 7.0 98 52-155 279-384 (438)
148 2ivn_A O-sialoglycoprotein end 49.4 25 0.00084 34.1 6.1 55 77-135 49-106 (330)
149 3eno_A Putative O-sialoglycopr 48.2 8.8 0.0003 37.5 2.7 121 75-212 52-176 (334)
150 3hhd_A Fatty acid synthase; tr 45.8 72 0.0025 35.8 9.9 102 52-157 246-355 (965)
151 2qo3_A Eryaii erythromycin pol 45.5 86 0.0029 34.9 10.5 100 52-156 264-373 (915)
152 2gp6_A 3-oxoacyl-[acyl-carrier 39.6 39 0.0013 34.1 6.0 100 52-156 280-384 (434)
153 2hg4_A DEBS, 6-deoxyerythronol 39.5 61 0.0021 36.1 8.1 100 52-156 286-395 (917)
154 3ven_A O-carbamoyltransferase 37.9 14 0.00047 39.1 2.3 28 336-363 51-78 (576)
155 2ix4_A 3-oxoacyl-[acyl-carrier 37.6 1.1E+02 0.0039 30.4 9.2 76 338-423 93-204 (431)
156 1xpm_A 3-hydroxy-3-methylgluta 35.5 18 0.0006 36.1 2.6 24 79-102 209-232 (396)
157 2w6k_A COBE; biosynthetic prot 35.3 78 0.0027 26.9 6.3 60 52-126 11-70 (145)
158 3sqz_A Putative hydroxymethylg 31.1 19 0.00067 36.4 2.1 40 338-379 90-134 (425)
159 3mqd_A Beta-ketoacyl synthase; 30.8 1.2E+02 0.0041 30.2 8.0 77 338-424 97-208 (428)
160 3nq4_A 6,7-dimethyl-8-ribityll 30.3 1.5E+02 0.0051 25.5 7.3 56 74-165 25-81 (156)
161 1xho_A Chorismate mutase; sout 26.5 1.4E+02 0.0049 25.3 6.3 50 81-134 55-104 (148)
162 2d0o_A DIOL dehydratase-reacti 24.8 28 0.00094 36.6 1.9 32 336-367 49-80 (610)
163 1rvv_A Riboflavin synthase; tr 22.9 1.9E+02 0.0066 24.7 6.6 29 74-102 25-53 (154)
164 3onr_A Protein transport prote 22.5 28 0.00097 26.1 1.1 27 336-362 17-43 (72)
165 2cc6_A VNG1446H, dodecin; flav 21.7 27 0.00094 25.8 0.8 28 336-363 15-42 (68)
166 2ux9_A Dodecin; flavoprotein; 21.6 28 0.00096 25.9 0.9 27 336-362 17-43 (69)
167 1hqk_A 6,7-dimethyl-8-ribityll 21.3 1.8E+02 0.0062 24.9 6.2 29 74-102 25-53 (154)
168 2yiz_A Dodecin; flavoprotein, 21.1 29 0.00099 25.8 0.9 27 336-362 17-43 (69)
169 2wge_A 3-oxoacyl-[acyl-carrier 20.8 99 0.0034 30.7 5.1 26 77-102 285-310 (416)
170 2vxa_A Dodecin; flavoprotein, 20.5 31 0.001 25.9 0.9 27 336-362 18-44 (72)
171 3eno_A Putative O-sialoglycopr 20.5 42 0.0015 32.6 2.2 25 338-362 57-81 (334)
172 2gel_A Putative GRAM negative 20.1 51 0.0018 30.1 2.6 25 337-361 38-62 (231)
No 1
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=4.7e-78 Score=629.64 Aligned_cols=426 Identities=89% Similarity=1.338 Sum_probs=358.8
Q ss_pred cCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccH
Q 012506 36 AGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASE 115 (462)
Q Consensus 36 ~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~ 115 (462)
.+++..+.+..++|++|||||++||||++..+|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++...+++.
T Consensus 16 ~~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~ 95 (442)
T 2wu9_A 16 AGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASE 95 (442)
T ss_dssp ----------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHH
T ss_pred cCCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChH
Confidence 35555666666777899999999999998435889999999999999999999999999999999999987643224678
Q ss_pred HHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccccc
Q 012506 116 CRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLP 195 (462)
Q Consensus 116 a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (462)
++.++..+|+|.++|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+.......+.+........+...
T Consensus 96 a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 175 (442)
T 2wu9_A 96 CRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLP 175 (442)
T ss_dssp HHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSC
T ss_pred HHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhH
Confidence 89999999997779999999999999999999999999999999999999999987653221111111110001122357
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhc
Q 012506 196 MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275 (462)
Q Consensus 196 ~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~ 275 (462)
|++++++|+++||+|||+||+|+++||++|.+|+++|+|++||+|++++.++++.+.....++++||++|+++|+|+|.+
T Consensus 176 mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~ 255 (442)
T 2wu9_A 176 MGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGK 255 (442)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhc
Confidence 99999999999999999999999999999999999999999999998754333222122357899999999999999999
Q ss_pred CCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCc
Q 012506 276 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 276 ~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DI 355 (462)
+||+|+++|++|.+|||+++|||+++||++++.|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++||
T Consensus 256 ~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DI 335 (442)
T 2wu9_A 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDI 335 (442)
T ss_dssp SCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999999999898888899999999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
|+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++.++.++||+++|+|||++.|+|
T Consensus 336 d~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v 415 (442)
T 2wu9_A 336 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAV 415 (442)
T ss_dssp CEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEE
Confidence 99999999999999999999999999999999999999999999999999999999997223999999999999999999
Q ss_pred EEeccccccccccccccccccccccC
Q 012506 436 FERGDCADELCNVRKVESNNFLSKDV 461 (462)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (462)
|++.++.+.+.+.++++...+||||.
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (442)
T 2wu9_A 416 FERGDGVDELRNARKVEAQGLLSKDA 441 (442)
T ss_dssp EEECSHHHHHHTC-------------
T ss_pred EEeccccccCCCccchhhcccccccC
Confidence 99999999999999999999999984
No 2
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-74 Score=600.37 Aligned_cols=387 Identities=59% Similarity=0.968 Sum_probs=349.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|+|++||||++.++|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|+|.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999986567889999999999999999999999999999999999877654 56788999999999778
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|+++|+++|+|+++||..|+++|++|++|++|++|+|.|++.|+.+...+.+.+.+.....+++.+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876543222222232222233455789999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+|||+||+|+++||++|.+|++.|+|++||+|++++.++|+ +.++++++++|+.+|+.+|+|+|.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987654443 22234678999999999999999999999999899999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
+|+++++|||+++||++++.|+++|.+|+++|++++..+.+|+.++.++..+++++|+++||+++|||+||+||+|+++.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCc-EEEEEeecccceeEEEEEEec
Q 012506 369 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR-FGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~-~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++|.||++++|||++||++++|||+||||+++++++++||+++++ + +||+++|+|||+|.|+|||+.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~--~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGK--RAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTS--CEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCC--CeeeEEEEeeccchhheEEEecc
Confidence 99999999999999999999999999999999999999999999987 7 999999999999999999986
No 3
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=3.8e-74 Score=591.88 Aligned_cols=381 Identities=43% Similarity=0.635 Sum_probs=346.1
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
|++|+|||++||||+|..+|.+++.++.+|+.+|+++||+++ |+++++||.+++|++.+++.++++.++.++..+|+|.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 468999999999999854489999999999999999999999 9999999999999998876546789999999999987
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
.+|+++|+++|+|+++||++|+++|++|++|++|++|+|+||+.|+.....+.+.+...++.. ...||+++++|+++|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~--~~~~g~~a~~~~~~~ 158 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKA--AGMMGLTAEMLSRLH 158 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC---------CCCHHHHHHHHHHT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccc--cccHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999887643222323222222222 467999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCc
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTT 286 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~ 286 (462)
|++||+|++|+++||++|.+|+++|+|++||+|++++.+. .++.+++.|+.+|+++|+|+|.++||+|+| +|++
T Consensus 159 g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~-----~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 159 GISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD-----GVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT-----SCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc-----CcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 9999999999999999999999999999999999875321 123578999999999999999999999999 9999
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~ 366 (462)
|.+|+|+++||++++||++++.|++++.+|+++|+|++..+..|+.++.++..+++++|+++||+++|||+||+||+|++
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~ 313 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA 313 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 367 QFVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 367 ~~~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.+.|.||+| ..|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 314 ~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 314 QILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCC--CEEEEEeccCcCceEEEEEEe
Confidence 999999999994 4589999999999999999999999999999999877 999999999999999999986
No 4
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=1.8e-73 Score=590.19 Aligned_cols=377 Identities=37% Similarity=0.613 Sum_probs=322.4
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
++++|+|||++||||+|.++|.+++.++.+|+.+|+++||++ +|+++++||.+++|++.+...+++++++.++..+|+|
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 457899999999999976779999999999999999999999 9999999999999998876544678999999999998
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC---CCChhhhhhhhhhcccccHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---SVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
.++|+++|+++|+|++++|..|+++|++|++|++|++|+|+||+.|+.... ..++. +.......+||++++++
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~----~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPE----TNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTT----TCCCCCCHHHHHHHHHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCch----hhccccccCHHHHHHHH
Confidence 889999999999999999999999999999999999999999987653321 11111 11223446899999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
+++|+++||+||+|++.||++|..|+++|+|++||+|++ +|+. ..++++|+.+|+++|+|++.++||+|+|+
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~----~~~g----~~~~~pd~~~r~~~t~e~l~~~~~vf~~~ 232 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVR----DQNG----LVILDHDEHMRPDTTMEGLAKLKTAFDGV 232 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEE----CTTS----CEEECSCTTCCTTCCHHHHHTSCBSCC--
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeee----cCCC----ceeeCCccccCCCCCHHHHhhCCCeecCC
Confidence 999999999999999999999999999999999999996 3332 24688999999999999999999999987
Q ss_pred CCc---------------------ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHH
Q 012506 284 GTT---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 342 (462)
Q Consensus 284 g~~---------------------t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~ 342 (462)
|.+ |.+|||+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++
T Consensus 233 g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~ 312 (407)
T 3svk_A 233 GEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATR 312 (407)
T ss_dssp -----------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHH
T ss_pred CccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHH
Confidence 754 99999999999999999999999999999999999999999999989999999999
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
++|+++||+++|||+||+||+|+++++.+.|.||++++|||++||++++|||+|+||+++++++++||+++++ ++||+
T Consensus 313 ~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~ 390 (407)
T 3svk_A 313 KVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNA--RRALI 390 (407)
T ss_dssp HHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTC--CEEEE
T ss_pred HHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCC--CEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999977 99999
Q ss_pred EeecccceeEEEEEEe
Q 012506 423 SMCIGTGMGAAAVFER 438 (462)
Q Consensus 423 ~~~~G~G~g~A~v~~~ 438 (462)
++|+|||+|.|+|||+
T Consensus 391 ~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 391 TLCIGGGMGVATIIER 406 (407)
T ss_dssp EEECSSSCEEEEEEEE
T ss_pred EeeccCcceEEEEEEc
Confidence 9999999999999997
No 5
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=1.6e-72 Score=581.57 Aligned_cols=380 Identities=39% Similarity=0.609 Sum_probs=345.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||++ ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. +++.++.++..+|+|.+
T Consensus 6 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 83 (396)
T 4dd5_A 6 MREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIPVE 83 (396)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999988765 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC-hhhhh-----hhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN-PKVKA-----FEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~-~~~~~-----~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|..|+++|++|++|++||+|+|+||+.|+... ..+. ..+.+ ..........|+
T Consensus 84 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (396)
T 4dd5_A 84 KPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMG 163 (396)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHH
T ss_pred ceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHH
Confidence 999999999999999999999999999999999999999998776431 1110 11111 000111235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+||+|+++||++|.+|+++|+|++||+||+++.++ .+.++++|+.+|+++|+|+|.+++
T Consensus 164 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~~~~ 237 (396)
T 4dd5_A 164 ITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLAKLR 237 (396)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875321 135789999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|||+++||++++||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++||+++|||+
T Consensus 238 ~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 317 (396)
T 4dd5_A 238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDL 317 (396)
T ss_dssp BSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999998899988889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||+++.|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 318 ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 318 VEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp EEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEE
T ss_pred EEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 396 ~ 396 (396)
T 4dd5_A 396 R 396 (396)
T ss_dssp C
T ss_pred C
Confidence 5
No 6
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=1.9e-72 Score=580.71 Aligned_cols=379 Identities=40% Similarity=0.672 Sum_probs=346.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+.+. ++++++.++..+|+|.+
T Consensus 4 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~~ 81 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGT-FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPDT 81 (394)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCTT
T ss_pred CceEEEEEcccCCccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999988774 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC------hhhhhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN------PKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|+.|+++|++|++|++|++|+|+||+.|+.. ...+. +.+...++ ......||
T Consensus 82 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g 160 (394)
T 3ss6_A 82 VTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLED-PIHHIMMG 160 (394)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBC-TTTCCBHH
T ss_pred ceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccc-ccccchHH
Confidence 99999999999999999999999999999999999999999877632 11111 11111111 12236799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+||+|+++||++|.+|+++|+|++||+|++++.++ .+.++++|+++|+++|+|++.+++
T Consensus 161 ~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~------~~~~~~~d~~~R~~~t~e~~~~~~ 234 (394)
T 3ss6_A 161 ETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR------KEVVFSKDEHPRADITAEKLAGLK 234 (394)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS------CEEEECSCCCCCTTCCHHHHHTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC------CceeecccccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875321 234789999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|+|+++||++++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++||+++|||+
T Consensus 235 pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ 314 (394)
T 3ss6_A 235 PAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADL 314 (394)
T ss_dssp BSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 315 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 392 (394)
T 3ss6_A 315 LEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIE 392 (394)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEEE
T ss_pred EEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCcCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999977 99999999999999999999
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 393 ~ 393 (394)
T 3ss6_A 393 A 393 (394)
T ss_dssp E
T ss_pred c
Confidence 7
No 7
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=1e-72 Score=582.23 Aligned_cols=381 Identities=50% Similarity=0.779 Sum_probs=339.4
Q ss_pred cCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcC----CCccccCcEEEEeccCCCCccccHHHHHH
Q 012506 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN----VDPSEVGDIVVGTVLAPGSQRASECRMAA 120 (462)
Q Consensus 45 ~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~ag----l~~~~Id~vivG~~~~~~~~~~~~a~~~a 120 (462)
|.++|++|||||++||||+|..+|.+++.++.+|+.+|+++||+++| +++++||.+++|+..++.. +++.++.++
T Consensus 5 ~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va 83 (393)
T 1afw_A 5 LEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAAC 83 (393)
T ss_dssp TSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHH
T ss_pred hhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHH
Confidence 34456899999999999998435899999999999999999999999 9999999999999877654 677899999
Q ss_pred HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CChhhhhhhhhhcccccHH
Q 012506 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VNPKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 121 ~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~~~~~~~~~~~~~~~~~g 197 (462)
..+|+|.++|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+..... ..+.+........++..|+
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 9999976799999999999999999999999999999999999999998755422111 1111110000112235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
..+++|+++||++||+||+|+++||++|.+|+++|+|++||+|++++. + . ++++|+.+|+++|+|+|.++|
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~---~-~~~~d~~~r~~~t~e~~~~~r 234 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G---S-ICQSDEGPRPNVTAESLSSIR 234 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S---C-EECSCSSCCSCCCHHHHHHCC
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C---c-eeccccccCCCCCHHHHhcCC
Confidence 999999999999999999999999999999999999999999997631 1 2 689999999999999999999
Q ss_pred CcccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 278 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 278 p~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
|+|+++ |++|.+|||+++|||+++||+++++|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++|||
T Consensus 235 pvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 314 (393)
T 1afw_A 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDID 314 (393)
T ss_dssp BSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCS
T ss_pred CcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCC
Confidence 999888 9999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++++ ||+++|+|||+|.|++|
T Consensus 315 ~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~----gl~~~c~ggg~g~a~~~ 390 (393)
T 1afw_A 315 IFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI----GVVSMCIGTGMGAAAIF 390 (393)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE----EEEEEEETTTEEEEEEE
T ss_pred EEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC----cEEEEeecccceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998743 99999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
+++
T Consensus 391 ~~~ 393 (393)
T 1afw_A 391 IKE 393 (393)
T ss_dssp EEC
T ss_pred EeC
Confidence 973
No 8
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=5.5e-72 Score=578.52 Aligned_cols=381 Identities=43% Similarity=0.647 Sum_probs=340.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rT~~~~-~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp -CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CceEEEEcccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 579999999999998 5688899999999999999999999999999999999998776543578899999999997679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC-hhhhhh------hhhh--c--cc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN-PKVKAF------EQAQ--N--CL 193 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~-~~~~~~------~~~~--~--~~ 193 (462)
|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+.. ...+. ..+.+. +... + ..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999999866521 11111 111010 0000 1 12
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+|++++++|+++||+|||+||+|+++||++|.+|+++|+|++||+|+++..+ . .++++++|+++|+++|+|+|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~---~---~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG---K---EEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET---T---EEEEECSCSCCCTTCCHHHH
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCC---C---CceeeccccccCCCCCHHHH
Confidence 45899999999999999999999999999999999999999999999976422 1 12578999999999999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.++||+|+++|++|.+|||+++|||+++||+++++|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++
T Consensus 235 ~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 314 (401)
T 1ulq_A 235 AALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFS 314 (401)
T ss_dssp HHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGG
T ss_pred hhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999989988889999999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||+||+||+|+++++.++|.||++ ..|+|++||++++|||+||||+++++++++||++++. +++|+++|+|||++
T Consensus 315 dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 315 DLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQG 392 (401)
T ss_dssp GCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEE
T ss_pred HcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCC--CEEEEEeecCCccc
Confidence 9999999999999999999999994 5689999999999999999999999999999999977 99999999999999
Q ss_pred EEEEEEec
Q 012506 432 AAAVFERG 439 (462)
Q Consensus 432 ~A~v~~~~ 439 (462)
.|+||++.
T Consensus 393 ~a~v~~~~ 400 (401)
T 1ulq_A 393 IAVVVEGM 400 (401)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999873
No 9
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=2e-71 Score=573.53 Aligned_cols=381 Identities=40% Similarity=0.639 Sum_probs=342.9
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|+..+... +++.++.++..+|+|.+
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 3689999999999998 568889999999999999999999999999999999999887654 67899999999999778
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC----CCCC-hhhhhhh---hhhccc--ccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE----GSVN-PKVKAFE---QAQNCL--LPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~----~~~~-~~~~~~~---~~~~~~--~~~g~ 198 (462)
+|.++|+++|+|+++||..|++.|++|++|++|++|+|+|+..|+... ..+. ..+.+.. ...+++ ..|+.
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 999999999999999999999999999999999999999997665321 1110 0111100 001112 56999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||+|||+||+|+++||++|.+|++.|+|++||+||+++.++ .++++++|+.+|+++|+|+|.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK------GLIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT------EEEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC------CceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875321 1246788999999999999999999
Q ss_pred cccCC--CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 279 VFKKD--GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 279 ~f~p~--g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|+|+ |++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+..|+.++.++..+++++|+++||+++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99985 9999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++.+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+||
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCC--CEEEEEEecccchheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999977 9999999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
|++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 974
No 10
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=1.6e-71 Score=573.93 Aligned_cols=381 Identities=40% Similarity=0.616 Sum_probs=345.0
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ++++++.++..+|+|.+
T Consensus 4 m~~v~Ivg~~rT~~g~-~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~~ 81 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGS-FGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPNS 81 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCTT
T ss_pred CCeEEEEECccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999987765 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCC-Chhh-----hhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSV-NPKV-----KAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~-~~~~-----~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|+.|+++|++|++|++||+|+|+||+.|+... ..+ +..+ .+..........||
T Consensus 82 ~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (395)
T 4e1l_A 82 VPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMG 161 (395)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHH
T ss_pred ceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHH
Confidence 999999999999999999999999999999999999999998654210 000 0000 01000111125799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+|++|+++||++|.+|+++|+|++||+||+++.++ .+++++++|+.+|+++|+|+|.+++
T Consensus 162 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~-----g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 162 ITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR-----GKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET-----TEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC-----CcceEECCccccCCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875422 1234688999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|+|+++||++++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+++|||+
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDL 316 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|++||
T Consensus 317 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 317 IEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTC--SEEEEEEESSTTEEEEEEEE
T ss_pred EEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCCCceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 395 ~ 395 (395)
T 4e1l_A 395 R 395 (395)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=6.1e-71 Score=569.09 Aligned_cols=380 Identities=43% Similarity=0.657 Sum_probs=341.6
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|++.+... +++.++.++..+|++..
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 4689999999999998 568899999999999999999999999999999999999887655 67899999999999655
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC----CCCCC------ChhhhhhhhhhcccccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA----WEGSV------NPKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~----~~~~~------~~~~~~~~~~~~~~~~~g~ 198 (462)
+|.++|+++|+|+++||..|++.|++|++|++|++|+|+|+..|+. +...+ +..+............|+.
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 8999999999999999999999999999999999999999886652 11111 0001100000111246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||+|||+||+|+++||++|.+|+++|+|++||+|+++..+ .+ ...+++|+.+|+++|+|+|.++||
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~---~~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR---KG---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT---TC---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccC---CC---ceeeccccccCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999976321 11 235789999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+++|++|.+|||+++|||+++||++++.|+++|.+|+++|.|++..+.+|+.++.++..+++++|+++||+++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+++.+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||++.|++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCC--CEEEEEEecccchheEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999977 999999999999999999986
No 12
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=1.3e-70 Score=566.18 Aligned_cols=380 Identities=43% Similarity=0.628 Sum_probs=342.4
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
|++|||||++||||+|..+|.+++.++.+|+.+++++||+++ |+++++||.+++|+..++...+++.++.++..+|+|.
T Consensus 4 m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~ 83 (390)
T 1wdk_C 4 PRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPH 83 (390)
T ss_dssp TTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCT
T ss_pred CCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCC
Confidence 578999999999999832688999999999999999999999 9999999999999987765435788999999999987
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCC-ChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSV-NPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|.++|+++|+|++.||+.|++.|++|++|++|++|+|.|+..|+... .+ ++.+... ..+...+|++++++|+++
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~-~~~~~~~~~~--~~~~~~~~g~~a~~~~~~ 160 (390)
T 1wdk_C 84 TSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG-VDPNPHMSLY--AAKASGMMGLTAEMLGKM 160 (390)
T ss_dssp TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTT-BCCCGGGGGT--SCGGGGSHHHHHHHHHHH
T ss_pred CccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccc-cccCcccccc--CCcchhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999987665321 11 1122111 123335699999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCC
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGT 285 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~ 285 (462)
||+|+|++|+|+++||++|.+|+++|+|.+||+|++++.+ .+ ....+++|+.+|+++|+|+|.++||+|+| +|+
T Consensus 161 ~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~---~~--~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~ 235 (390)
T 1wdk_C 161 HGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDE---NG--FLKIFDYDETIRPDTTLESLAALKPAFNPKGGT 235 (390)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECT---TC--CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCC
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccC---CC--cceeeccccccCCCCCHHHHhcCCCcccCCCCc
Confidence 9999999999999999999999999999999999875321 01 11357889999999999999999999999 999
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
+|++|||+++|||+++||++++.|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++|||+||+||+|+
T Consensus 236 vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~ 315 (390)
T 1wdk_C 236 VTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA 315 (390)
T ss_dssp CCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH
T ss_pred EechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCH
Confidence 99999999999999999999999999999999999999999989988888999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 366 SQFVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 366 ~~~~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++.+.|.||++ +.|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|+|++.|+||++
T Consensus 316 ~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 316 AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCC--CEEEEEecccchheEEEEEEe
Confidence 9999999999999 6799999999999999999999999999999999977 999999999999999999986
No 13
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=8.1e-68 Score=546.31 Aligned_cols=378 Identities=33% Similarity=0.545 Sum_probs=337.7
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
.+++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|++.+... +++.++.++..+|+|.
T Consensus 6 ~~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~ 83 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGS-FLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPI 83 (395)
T ss_dssp BCCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred CCCCeEEEecccccccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCC
Confidence 34789999999999998 568888999999999999999999999999999999999887665 7789999999999976
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CC-hh------hhhhhhhhcccccHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VN-PK------VKAFEQAQNCLLPMG 197 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~-~~------~~~~~~~~~~~~~~g 197 (462)
++|+++|+++|+|+++||..|+++|++|++|++|++|+|.|+..++..... +. .. +....+ ......|+
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~m~ 162 (395)
T 2ib8_A 84 STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTD-VYNKIHMG 162 (395)
T ss_dssp TCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEE-TTTTEEHH
T ss_pred CceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCccccccccccccccccccccccccccc-ccccchHH
Confidence 899999999999999999999999999999999999999998866521110 00 00 111111 11235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||++++++++||++|.+|++.|+|++||+|+++... .+.+.+++.|+.+| ++|+|.+.++|
T Consensus 163 ~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-----~~p~~~~~~D~~~r-~~~~~~l~~l~ 236 (395)
T 2ib8_A 163 SCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-----GQPDVVVKEDEEYK-RVDFSKVPKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-----TSCCEEECSCSGGG-SCCTTTGGGSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-----CCcceeeccccccc-cCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999987321 11124688999999 59999999999
Q ss_pred CcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 278 PVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 278 p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
|+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||
T Consensus 237 ~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (395)
T 2ib8_A 237 TVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIA 316 (395)
T ss_dssp CTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEE
T ss_pred ccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcC
Confidence 99954 89999999999999999999999999999999999999999998888888888889999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++++..+|+||++++|+|++||++++|||+||||+++++++++||++ + ++||+++|+|||+|.|++|
T Consensus 317 ~ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~--~~gl~~~~~ggG~g~a~~~ 392 (395)
T 2ib8_A 317 MWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--G--EYGLASICNGGGGASAMLI 392 (395)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--C--CceEEEEecccCHhheEEE
Confidence 99999999999999999999999999999999999999999999999999999997 5 7999999999999999999
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
|+
T Consensus 393 ~~ 394 (395)
T 2ib8_A 393 QK 394 (395)
T ss_dssp EE
T ss_pred Ec
Confidence 97
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=6.2e-58 Score=486.58 Aligned_cols=376 Identities=15% Similarity=0.149 Sum_probs=294.0
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCC-----------CccccHHH
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG-----------SQRASECR 117 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~-----------~~~~~~a~ 117 (462)
++++||||++|||+.+ ++|.+++.++.||+.+|+++||+|+||++++||.+|.|++.... .+..+.++
T Consensus 17 PRtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~ 95 (520)
T 4egv_A 17 PRTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPR 95 (520)
T ss_dssp TTCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHH
T ss_pred CCCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHH
Confidence 3778999999999975 56888999999999999999999999999999988877553221 12456788
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhh--hhhhhccccc
Q 012506 118 MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKA--FEQAQNCLLP 195 (462)
Q Consensus 118 ~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~--~~~~~~~~~~ 195 (462)
.++..+|++ ..+.++++.+|+|++++|+.|++.|++|++|+||++|+|+||+.|+.......+.+.. .....+....
T Consensus 96 ~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (520)
T 4egv_A 96 SVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYG 174 (520)
T ss_dssp HHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------
T ss_pred HHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccc
Confidence 999999996 5789999999999999999999999999999999999999998876432211111111 1111223356
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecc-----cCCCCCCCCceEEeccCCCCCCCCH
Q 012506 196 MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI-----VDPKTGDEKPVTISVDDGIRPNTSV 270 (462)
Q Consensus 196 ~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~-----~np~a~~~~~~~v~~d~~~r~~~t~ 270 (462)
++..++++..+||+++++++.++..++.++..++..+.|++||+||.++. .|| ++.+|.++|+
T Consensus 175 ~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np------------~a~~r~~~t~ 242 (520)
T 4egv_A 175 YDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNP------------YSSAPTERSV 242 (520)
T ss_dssp ------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCT------------TSSSCCCCCH
T ss_pred cchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCc------------cccccCCCCH
Confidence 77888999999999999999999999999999999999999999996642 355 4456777999
Q ss_pred HHHhcCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC--------CccHHHH
Q 012506 271 SELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM--------GVGPAVA 340 (462)
Q Consensus 271 e~l~~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~--------~~~~~~A 340 (462)
|++.+++|.|.+ ++.+|++|||+++|||+|+||+|+++|+++|++|+++|.+++..+.+|..+ +.++..+
T Consensus 243 E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a 322 (520)
T 4egv_A 243 EELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTA 322 (520)
T ss_dssp HHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHH
T ss_pred HHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHH
Confidence 999999998865 667789999999999999999999999999999999999998887766544 2356789
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 341 i~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
++++|+++||+++|||+||+||||+++++.++|.||||+ .|+|++||++++|||++++|++.++++++|||++.+
T Consensus 323 ~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~-- 400 (520)
T 4egv_A 323 VNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPG-- 400 (520)
T ss_dssp HHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTT--
T ss_pred HHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCC--
Confidence 999999999999999999999999999999999999964 489999999999999999999999999999999988
Q ss_pred cEEEEEeecccce--eEEEEEEeccc
Q 012506 418 RFGVISMCIGTGM--GAAAVFERGDC 441 (462)
Q Consensus 418 ~~gl~~~~~G~G~--g~A~v~~~~~~ 441 (462)
+++|++. .|+-. ..+++|.++..
T Consensus 401 ~~~L~~~-~gg~~~~~~~~~l~~~~~ 425 (520)
T 4egv_A 401 QFALVGA-NGGIASKYSVGIYSTEPA 425 (520)
T ss_dssp CEEEEEE-EETTTTEEEEEEEESSCC
T ss_pred CceEEeC-CCCeeeeeeEEEEcCCCC
Confidence 8999984 44432 34667777653
No 15
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=6.5e-32 Score=280.02 Aligned_cols=272 Identities=19% Similarity=0.247 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCCC
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp~ 127 (462)
+|+.+++++||+++|+++++|| +|++|+..+... . ....+..++..+|+
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-- 156 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC--
Confidence 7999999999999999999999 699998765310 0 12467889999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC-CCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM-TVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+ +... ..+
T Consensus 157 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~----------------------~~~--------- 205 (416)
T 1e5m_A 157 KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLS----------------------YAG--------- 205 (416)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH----------------------HHH---------
T ss_pred CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH----------------------HHH---------
Confidence 47999999999999999999999999999999999999985 3200 000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
| . ..+.+.. +..+| ++. .+| |+.
T Consensus 206 ----------~-----~------~~~~ls~-------~~~~p------------~~~------------~rp-fd~---- 228 (416)
T 1e5m_A 206 ----------F-----A------SARALSF-------RNDDP------------LHA------------SRP-FDK---- 228 (416)
T ss_dssp ----------H-----H------HTTCBCC-------CTTCG------------GGT------------CCT-TBT----
T ss_pred ----------H-----H------HcCCccC-------CCCCC------------ccc------------ccc-Ccc----
Confidence 0 0 0011100 00011 222 234 543
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||++|+|
T Consensus 229 -~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H 307 (416)
T 1e5m_A 229 -DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAH 307 (416)
T ss_dssp -TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEE
Confidence 224455899999999999999999999999999999987643 54455667889999999999999999999999
Q ss_pred CCCHHH----HHH-HHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C-------
Q 012506 362 EAFASQ----FVY-CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R------- 415 (462)
Q Consensus 362 dafa~~----~~~-~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~------- 415 (462)
++++.. +.. +.+.+|...+++++++.+..+|||+||+|+.++++++++|+++. .
T Consensus 308 gtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 387 (416)
T 1e5m_A 308 GTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQ 387 (416)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSS
T ss_pred CCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCc
Confidence 999873 332 23456665567788777777999999999999999999999853 0
Q ss_pred ----CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ----DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.++.||.+.++||++.
T Consensus 388 ~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 388 SRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 247899988888888899999863
No 16
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=1.2e-31 Score=278.86 Aligned_cols=277 Identities=20% Similarity=0.261 Sum_probs=212.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----cEEEEeccCC-------------------------CCccccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAP-------------------------GSQRASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~-Id----~vivG~~~~~-------------------------~~~~~~~a~~~a~~~ 123 (462)
...+|+.+|+++||+|+|+++++ || ++++|+..+. .......+..++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35789999999999999999998 88 5788875321 011234577899999
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
|+ +.|.++|+++|+|+++||..|+++|++|++|++||+|+|++... +
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~------- 212 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSR------------------------I------- 212 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------H-------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCH------------------------H-------
Confidence 99 46999999999999999999999999999999999999996330 0
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
.+..|. ..+.+.. +. .+ +.-...+| |+.
T Consensus 213 ---------~~~~~~-----------~~~~ls~------------------------~~-----~~-~~~~~~~p-fd~- 240 (428)
T 3kzu_A 213 ---------SLAGFA-----------ACKALST------------------------ER-----ND-DPTAASRP-YDE- 240 (428)
T ss_dssp ---------HHHHHH-----------HTTCBCC------------------------SC-----TT-SGGGTCCT-TBT-
T ss_pred ---------HHHHHH-----------Hcccccc------------------------Cc-----cC-CcccccCC-ccc-
Confidence 000000 0001100 00 00 00012234 432
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..++..++|||+++||++.+.|++++.+++++|.|++... ..|...+.+...+++++|+++||+++|||++
T Consensus 241 ----~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 316 (428)
T 3kzu_A 241 ----DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYI 316 (428)
T ss_dssp ----TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ----CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEE
Confidence 2245558999999999999999999999999999999876 3566666778899999999999999999999
Q ss_pred EecCCCHHH----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 359 EINEAFASQ----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 359 eihdafa~~----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
|+|++++.. ...+.+.+|.+.+++|++|++..+|||+||+|+.++++++++|+++.
T Consensus 317 e~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 396 (428)
T 3kzu_A 317 NAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP 396 (428)
T ss_dssp ECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCB
T ss_pred EecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCC
Confidence 999887732 23344557887789999999999999999999999999999999861
Q ss_pred -----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 -----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 -----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 397 ~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 397 HKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 1247899988888889999999864
No 17
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=2.1e-32 Score=284.59 Aligned_cols=273 Identities=17% Similarity=0.244 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Glp 126 (462)
..|+.+++++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 89 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 167 (427)
T 3ho9_A 89 IQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL- 167 (427)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC-
Confidence 56899999999999999999999 488887643210 012357789999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+.
T Consensus 168 -~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~---------------------~~~~-------- 217 (427)
T 3ho9_A 168 -RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG---------------------VGGF-------- 217 (427)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHHH--------
T ss_pred -CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH---------------------HHHH--------
Confidence 4799999999999999999999999999999999999999865100 0000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
.. .+.+.. .++ ..+ ...+| |+.
T Consensus 218 ----------------~~------~~~ls~-----------------------~~~------~~~--~~~~p-fd~---- 239 (427)
T 3ho9_A 218 ----------------GA------ARALST-----------------------RND------NPQ--AASRP-WDK---- 239 (427)
T ss_dssp ----------------HH------TTCBCC-----------------------CTT------CHH--HHCCT-TBT----
T ss_pred ----------------Hh------ccCccc-----------------------CCC------CCC--cccCC-ccC----
Confidence 00 000000 000 000 12334 332
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|+|
T Consensus 240 -~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H 318 (427)
T 3ho9_A 240 -ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAH 318 (427)
T ss_dssp -TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence 1233448999999999999999999999999999998875 3455566778899999999999999999999999
Q ss_pred CCCHH-----HHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------C
Q 012506 362 EAFAS-----QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------R 415 (462)
Q Consensus 362 dafa~-----~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------~ 415 (462)
.+++. ....+.+.||.+.+++|+++++..+|||+||+|+.++++++++|+++. .
T Consensus 319 gtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 398 (427)
T 3ho9_A 319 GTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHE 398 (427)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSS
T ss_pred CCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccc
Confidence 76665 445566778888889999999999999999999999999999999861 0
Q ss_pred -----CCcEEEEEeecccceeEEEEEEe
Q 012506 416 -----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 399 ~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 399 ARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 34889999888888999999875
No 18
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=3.1e-31 Score=274.66 Aligned_cols=274 Identities=19% Similarity=0.238 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCC-----------------C--------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-----------------S--------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~-----------------~--------~~~~~a~~~a~~~Gl 125 (462)
...|+.+|+++||+++|+++++|| +|++|+..+.. . .....+..++..+|+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 466999999999999999999999 89999864221 0 011247789999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|++..... ..+
T Consensus 154 --~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~---------------------~~~-------- 202 (413)
T 3o04_A 154 --KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS---------------------LAG-------- 202 (413)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH---------------------HHH--------
T ss_pred --CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH---------------------HHH--------
Confidence 4699999999999999999999999999999999999999654100 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+. ..+.+... .+| +.. .+| |+.
T Consensus 203 ----------------~~------~~~~ls~~--------~~p------------~~~------------~~p-fd~--- 224 (413)
T 3o04_A 203 ----------------FT------ANKALSLN--------PDP------------ETA------------CRP-FDK--- 224 (413)
T ss_dssp ----------------HH------HTTCBCCC--------CCT------------TTS------------CCT-TBT---
T ss_pred ----------------HH------hcccccCC--------CCC------------CCC------------cCC-CcC---
Confidence 00 00111100 011 111 223 432
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++.+.|++++.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|+
T Consensus 225 --~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~ 302 (413)
T 3o04_A 225 --DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINA 302 (413)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred --CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 1234458999999999999999999999999999998875 344555566788999999999999999999999
Q ss_pred cCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------
Q 012506 361 NEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------- 414 (462)
Q Consensus 361 hdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------- 414 (462)
|++++.. +...+ +.+|...+++|+++++..+|||+||+|+.++++++++|+++.
T Consensus 303 HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 382 (413)
T 3o04_A 303 HGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPN 382 (413)
T ss_dssp CCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBS
T ss_pred eCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCC
Confidence 9999973 33333 345666678999999999999999999999999999999752
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.+..||.+.++||++.
T Consensus 383 ~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 383 EAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp SCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 1348899999899999999999875
No 19
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.4e-32 Score=280.60 Aligned_cols=275 Identities=20% Similarity=0.302 Sum_probs=212.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|+++++||. +++|+..++.. .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 67776544310 01135788899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+.. ++.....
T Consensus 150 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~------------------------~~~~~~~--- 200 (408)
T 1j3n_A 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT------------------------PMAIGAF--- 200 (408)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS------------------------HHHHHHH---
T ss_pred C--CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC------------------------HHHHHHH---
Confidence 9 4699999999999999999999999999999999999998643 0000000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.. .+.+. +. +.+.+ ...+| |+.
T Consensus 201 ------------------~~------~~~ls------------~~-----------------~~~p~--~~~~p-fd~-- 222 (408)
T 1j3n_A 201 ------------------AV------MRALS------------TR-----------------NEEPE--KASRP-FTL-- 222 (408)
T ss_dssp ------------------HH------TTCBC------------CC-----------------TTCHH--HHCCT-TBT--
T ss_pred ------------------Hh------ccccc------------CC-----------------CCCCC--cCccc-CcC--
Confidence 00 00110 00 00111 12334 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|
T Consensus 223 ---~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve 299 (408)
T 1j3n_A 223 ---SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYIN 299 (408)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 1244558999999999999999999999999999998875 34555566778899999999999999999999
Q ss_pred ecCCCHHH-----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 360 INEAFASQ-----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 360 ihdafa~~-----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
+|++++.. ...+.+.||.+.+++|+++++..+||+.||+|+.+++.++++|+++.
T Consensus 300 ~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~ 379 (408)
T 1j3n_A 300 AHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP 379 (408)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS
T ss_pred EeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC
Confidence 99999975 34455678887778999999999999999999999999999999852
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
.+.++++++.++.||.+.++||++
T Consensus 380 ~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 380 EPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp SCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCcCCCCCEEEEecccCCcceEEEEEec
Confidence 023789998888888999999975
No 20
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.98 E-value=1.4e-30 Score=270.86 Aligned_cols=273 Identities=16% Similarity=0.175 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 171 (428)
T 3mqd_A 92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI 171 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence 467999999999999999999999 688887644311 012467889999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
++|+++|+++|+|+++||+.|+++|++|++|++||+|+|+|+..+. ++ ..
T Consensus 172 --~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~----------------------~~------~~ 221 (428)
T 3mqd_A 172 --KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLS----------------------VL------FD 221 (428)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH----------------------HH------HH
T ss_pred --CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHH----------------------HH------HH
Confidence 5799999999999999999999999999999999999999865110 00 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
. .+.+.. ... .+++. ..+| |+.
T Consensus 222 ~------------------------~~~ls~------------~~~------~~p~~------------~~rp-fd~--- 243 (428)
T 3mqd_A 222 A------------------------MGAMSS------------KYN------DTPST------------ASRA-YDK--- 243 (428)
T ss_dssp H------------------------TTCBCC------------TTT------TSGGG------------SCCT-TBT---
T ss_pred H------------------------hhhhcc------------ccc------CCccc------------ccCc-ccC---
Confidence 0 000000 000 00111 1234 443
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~---~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
..+...++|||+++||++++.|+++|.+|+++|.|++....... .++.++..+++++|+ |++ +||||||+|.
T Consensus 244 --~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~Hg 318 (428)
T 3mqd_A 244 --NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHA 318 (428)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCC
T ss_pred --CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeC
Confidence 12334489999999999999999999999999999998873322 146678899999999 999 9999999999
Q ss_pred CCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------------
Q 012506 363 AFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------------- 414 (462)
Q Consensus 363 afa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------------- 414 (462)
+++.. +... .+.+|...+.+++++.+..+|||+||+|+++++.++++|+++.
T Consensus 319 tgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~ 398 (428)
T 3mqd_A 319 TSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKR 398 (428)
T ss_dssp CSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSC
T ss_pred CCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCc
Confidence 99863 3333 4556754555678888888999999999999999999999751
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++..+.||.+.++||++.+
T Consensus 399 ~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 399 IDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp EESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 12378888888888899999998754
No 21
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.97 E-value=1.1e-30 Score=270.69 Aligned_cols=269 Identities=21% Similarity=0.225 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
.+|+.+++++||+++|+ +++|. |++|+..++.. . ....+..++..+|+
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 160 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA- 160 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc-
Confidence 47999999999999998 55653 88988765431 0 01357788999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+..
T Consensus 161 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~---------------------~~~~~------- 211 (416)
T 2wge_A 161 -RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP---------------------IAAFS------- 211 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH---------------------HHHHH-------
T ss_pred -CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH---------------------HHHHH-------
Confidence 4799999999999999999999999999999999999999865100 00000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
..+.+.. +. .+++.. .+| |+.
T Consensus 212 -----------------------~~~~l~~------------~~-------~~~~~~------------~~p-fd~---- 232 (416)
T 2wge_A 212 -----------------------MMRAMST------------RN-------DEPERA------------SRP-FDK---- 232 (416)
T ss_dssp -----------------------TTTCBCC------------CT-------TSGGGS------------CCT-TBT----
T ss_pred -----------------------hcchhhc------------cc-------cCCccc------------ccc-ccc----
Confidence 0001100 00 001111 223 432
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..++...+||++++||++++.|+++|.+++++|.|++... ..|+.++.++..+++++|+++||+++|||+||+|
T Consensus 233 -~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H 311 (416)
T 2wge_A 233 -DRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAH 311 (416)
T ss_dssp -TCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 2345568999999999999999999999999999998865 4566666778899999999999999999999999
Q ss_pred CCCHHH----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------------
Q 012506 362 EAFASQ----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------------- 414 (462)
Q Consensus 362 dafa~~----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------------- 414 (462)
++++.. +...++.+|. .++++++++..+|||+||+|+.++++++++|+++.
T Consensus 312 gtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 389 (416)
T 2wge_A 312 GTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEP 389 (416)
T ss_dssp CCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSC
T ss_pred CCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCC
Confidence 999975 6666677753 26788888889999999999999999999999853
Q ss_pred --CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 --RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 --~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
.+.++++++..+.||.+.++||++
T Consensus 390 ~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 390 RYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp EECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCEEEEeCcccCceeEEEEEEe
Confidence 124788998887788888999875
No 22
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.97 E-value=2.8e-30 Score=269.36 Aligned_cols=274 Identities=18% Similarity=0.248 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|+++++|| +|++|+..++.. .....+..++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 457999999999999999999999 999998765410 012467889999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+... +..
T Consensus 178 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~~~------- 224 (437)
T 2gqd_A 178 --KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITH------------------------MAI------- 224 (437)
T ss_dssp --CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHH-------
T ss_pred --CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH------------------------HHH-------
Confidence 46999999999999999999999999999999999999986440 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
..| . ..+.+.. ..+|. . ..+| |+.
T Consensus 225 ---------~~~-----~------~~~~ls~--------~~~p~------------~------------~~~p-fd~--- 248 (437)
T 2gqd_A 225 ---------AGF-----S------ASRALST--------NDDIE------------T------------ACRP-FQE--- 248 (437)
T ss_dssp ---------HHH-----H------HTTCBCC--------CCCTT------------T------------SSCT-TCT---
T ss_pred ---------HHH-----H------hccCccC--------CCCCc------------c------------ccCC-CCC---
Confidence 000 0 0011100 00111 1 1234 543
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||+||+
T Consensus 249 --~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~ 326 (437)
T 2gqd_A 249 --GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNA 326 (437)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred --CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEE
Confidence 234556899999999999999999999999999999987643 3334455678999999999999999999999
Q ss_pred cCCCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|++++.. +... .+.+|...+++++++.+..+|||+||+|+.++++++++|+++.-
T Consensus 327 HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~ 406 (437)
T 2gqd_A 327 HGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPN 406 (437)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBS
T ss_pred ECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCC
Confidence 9999974 3333 34567655678887777779999999999999999999998530
Q ss_pred -----CCcEEEEEeecccceeEEEEEEec
Q 012506 416 -----DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.++.||.+.++||++.
T Consensus 407 ~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 407 EAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp SCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred ccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 247899988877888899999864
No 23
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.97 E-value=3.2e-30 Score=268.96 Aligned_cols=273 Identities=19% Similarity=0.232 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~-~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
..+|+.+++++||+++|+++ ++|| +|++|+..++.. .....+..++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 46799999999999999998 8888 599998765420 01246888999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+.. |. ...+
T Consensus 177 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~--------------------~~~~------- 226 (438)
T 2iwz_A 177 L--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PL--------------------SLAG------- 226 (438)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH--------------------HHHH-------
T ss_pred C--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HH--------------------HHHH-------
Confidence 9 4699999999999999999999999999999999999998643 00 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
| . ..+.+... .+| +. ..+| |+.
T Consensus 227 ------------~-----~------~~~~ls~~--------~~p------------~~------------~~~p-fd~-- 248 (438)
T 2iwz_A 227 ------------F-----S------RARALSTN--------SDP------------KL------------ACRP-FHP-- 248 (438)
T ss_dssp ------------H-----H------HTTCBCCC--------SCT------------TT------------SCCT-TCT--
T ss_pred ------------H-----H------hcCCcCCC--------CCC------------Cc------------cccc-CCC--
Confidence 0 0 00111100 011 11 1234 543
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||++|
T Consensus 249 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve 325 (438)
T 2iwz_A 249 ---KRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN 325 (438)
T ss_dssp ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 123456899999999999999999999999999999987643 444556678899999999999999999999
Q ss_pred ecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 360 INEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 360 ihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
+|++++.. +...+ +.+|....++++++.+..+|||+||+|+.++++++++|+++.
T Consensus 326 ~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~ 405 (438)
T 2iwz_A 326 AHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP 405 (438)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB
T ss_pred ecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC
Confidence 99999874 33333 346655567787777777899999999999999999999853
Q ss_pred --C---C---CcEEEEEeecccceeEEEEEEe
Q 012506 415 --R---D---CRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 --~---~---~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
. . .++++++.+..||.+.++||++
T Consensus 406 ~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 406 LKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp SSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 0 1 5789998888888999999875
No 24
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.97 E-value=1.5e-30 Score=271.00 Aligned_cols=276 Identities=17% Similarity=0.219 Sum_probs=208.9
Q ss_pred CHHHHHHHHHHHHHHHcCC-CccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl-~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~ 123 (462)
...+|+.+++++||+++|+ ++++|| ++++|+..+... . ....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4578999999999999999 999998 699998654310 0 124678899999
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
|+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+
T Consensus 167 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------------~~~------ 217 (431)
T 2ix4_A 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS---------------------VAG------ 217 (431)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHH------
T ss_pred CC--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH------
Confidence 99 4699999999999999999999999999999999999999865100 000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
| .+ .+.+. ++.+ .++++. .+| |+.
T Consensus 218 -------------~-----~~------~~~ls------------~~~~------~~~~~~------------~~p-fd~- 241 (431)
T 2ix4_A 218 -------------F-----SR------SRALS------------TKFN------SSPQEA------------SRP-FDC- 241 (431)
T ss_dssp -------------H-----HH------TTCBC------------CTTT------TCGGGS------------CCT-TBT-
T ss_pred -------------H-----Hh------ccccC------------cccc------CCcccc------------ccc-CCC-
Confidence 0 00 00100 0000 011221 223 332
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..+.+.++|||+++||++++.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++
T Consensus 242 ----~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~v 317 (431)
T 2ix4_A 242 ----DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV 317 (431)
T ss_dssp ----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ----CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 2345568999999999999999999999999999999876 4555556677889999999999999999999
Q ss_pred EecCCCHHH----HHHHH-HHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C--
Q 012506 359 EINEAFASQ----FVYCR-NKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R-- 415 (462)
Q Consensus 359 eihdafa~~----~~~~~-e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~-- 415 (462)
|+|++++.. +...+ +.++.. ..++++++++..+|||+||+|+.++++++++|+++. .
T Consensus 318 e~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~ 397 (431)
T 2ix4_A 318 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 397 (431)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSS
T ss_pred EEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 999998863 33333 233322 256788888889999999999999999999999863 0
Q ss_pred ----------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ----------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ----------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 398 ~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 398 FMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp SCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 24789998888888889999875
No 25
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.97 E-value=1.1e-29 Score=265.78 Aligned_cols=275 Identities=17% Similarity=0.224 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~I-d----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
..+|+.+|+++||+++|+++++| | ++++|+..+.. ...+..+..++..+|
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 45799999999999999999999 7 68888764321 001235678999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||..|+++|++|++|++||+|+|.++... .+...+
T Consensus 182 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~----------------------~~~~~~---- 233 (451)
T 4ddo_A 182 F--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV----------------------SLGGFA---- 233 (451)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH----------------------HHHHHH----
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH----------------------HHHHHH----
Confidence 9 469999999999999999999999999999999999999976510 000000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+..+...+ |.+ +.....+| |+.
T Consensus 234 --------------------~~~~ls~~-~~~----------------------------------~~~~~~~p-fd~-- 255 (451)
T 4ddo_A 234 --------------------AARALSTG-FSE----------------------------------EPVRASRP-FDR-- 255 (451)
T ss_dssp --------------------HTTCBCCS-CTT----------------------------------SGGGSCCT-TBT--
T ss_pred --------------------HHhhhccC-CCc----------------------------------Cccccccc-ccc--
Confidence 00000000 110 11112334 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC------CccHHHHHHHHHHHcCCCCCCccEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~------~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..+++.++|||+++||++++.|++++.+|+++|.|++... ++..+ +.+...+++++|+++||+++|||+|
T Consensus 256 ---~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~v 331 (451)
T 4ddo_A 256 ---DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYV 331 (451)
T ss_dssp ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ---CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 2244558999999999999999999999999999998876 33322 2245789999999999999999999
Q ss_pred EecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------
Q 012506 359 EINEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------- 414 (462)
Q Consensus 359 eihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------- 414 (462)
|+|++++.. +...+ +.+|. ..++++++.+..+|||+||+|++++++++++|+++.
T Consensus 332 e~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 410 (451)
T 4ddo_A 332 NAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDL 410 (451)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEE
T ss_pred EecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccc
Confidence 999999973 33333 34565 446677777888999999999999999999999751
Q ss_pred -------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.+.++++++.++.||.+.++||++..
T Consensus 411 ~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 411 IGPAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp CCSSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred cCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 02478999988888999999999754
No 26
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.6e-29 Score=263.30 Aligned_cols=271 Identities=21% Similarity=0.241 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHHcCCC---ccccCcEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCCC
Q 012506 76 DDLLAPVLKAVIEKTNVD---PSEVGDIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~---~~~Id~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp~ 127 (462)
.+|+.+++++||+++|++ +++| ++++|+..++.. . ....+..++..+|+
T Consensus 100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl-- 176 (434)
T 2gp6_A 100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA-- 176 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC--
Confidence 679999999999999983 3333 588887755431 0 01357788999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|+++|+++|+|+++||..|+++|++|++|++||+|+|.++... .
T Consensus 177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------------~------------ 222 (434)
T 2gp6_A 177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAV----------------------P------------ 222 (434)
T ss_dssp CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHH----------------------H------------
T ss_pred CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHH----------------------H------------
Confidence 479999999999999999999999999999999999999986510 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcc
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 287 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t 287 (462)
++..++.++ .+.. +..+| ++. .+| |+.
T Consensus 223 ---------~~~~~~~~~-------~ls~-------~~~~p------------~~~------------~~p-fd~----- 249 (434)
T 2gp6_A 223 ---------IAGFAQMRI-------VMST-------NNDDP------------AGA------------CRP-FDR----- 249 (434)
T ss_dssp ---------HHHHHTTTS-------SCCC-------CTTCT------------TTS------------CCS-SBT-----
T ss_pred ---------HHHHHHHHH-------HhcC-------CCCCC------------CCc------------eec-ccc-----
Confidence 000000000 0000 00011 111 223 332
Q ss_pred cCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 288 ~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++... ..|+..+.+...+++++|+++||+++|||+||+|.
T Consensus 250 ~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hg 329 (434)
T 2gp6_A 250 DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHA 329 (434)
T ss_dssp TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCC
T ss_pred cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeC
Confidence 1244558999999999999999999999999999998875 34555556778899999999999999999999995
Q ss_pred CCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----------------------
Q 012506 363 AFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---------------------- 415 (462)
Q Consensus 363 afa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---------------------- 415 (462)
..+.. +...+ +.+| .+++|++|++..+|||+||+|+.++++++++|+++.-
T Consensus 330 tgt~~~D~~E~~al~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 407 (434)
T 2gp6_A 330 TGTQVGDLAEGRAINNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEP 407 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSC
T ss_pred CcCccchHHHHHHHHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCc
Confidence 55432 22222 2333 3379999999999999999999999999999998631
Q ss_pred ---CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ---DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ---~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 408 ~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 408 RPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 24789999888888999999875
No 27
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=2.2e-29 Score=260.93 Aligned_cols=272 Identities=18% Similarity=0.186 Sum_probs=203.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|+++++|| ++++|+..++.. .....+..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 789987754320 02356889999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++| +|++||+|+|.+... ..+.
T Consensus 158 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~----------------------~~~~------- 205 (415)
T 1tqy_B 158 M--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDP----------------------WGWV------- 205 (415)
T ss_dssp C--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSH----------------------HHHH-------
T ss_pred C--CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCH----------------------HHHH-------
Confidence 9 4699999999999999999999999999 999999999995320 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.+.+ .+.+. .|. ++++.+ +| |+.
T Consensus 206 ----------------~~~~------~~~ls----------~~~----------~~~~~~------------~p-fd~-- 228 (415)
T 1tqy_B 206 ----------------SQIA------SGRIS----------TAT----------DPDRAY------------LP-FDE-- 228 (415)
T ss_dssp ----------------HHHT------TSCBC----------CCS----------CGGGSC------------CT-TST--
T ss_pred ----------------HHHh------ccCcc----------CCC----------CCCCCc------------CC-CCC--
Confidence 0000 00000 000 012222 33 433
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCC-CceEEEEEEEEeccCCCCCCc--cHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGV--GPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-~~~~~i~g~~~~~~~p~~~~~--~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+.+.++|||+++||++.+.|+++|. +++++|.|++........... +...+++++|+++||+++|||++|+|
T Consensus 229 ---~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~H 305 (415)
T 1tqy_B 229 ---RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFAD 305 (415)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred ---CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEe
Confidence 235566899999999999999999999 999999999987542221111 77889999999999999999999999
Q ss_pred CCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
++++. .+...++. +|-.+ +.++.-+..+|||+||+|+.+++.++++|+++.
T Consensus 306 gtgt~~~D~~E~~al~~~~g~~~--~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 383 (415)
T 1tqy_B 306 GAGVPELDAAEARAIGRVFGREG--VPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGE 383 (415)
T ss_dssp CCCSHHHHHHHHHHHHHHHCTTC--SEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSS
T ss_pred CCCCcCcCHHHHHHHHHHhCCCC--ceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCC
Confidence 99985 45555554 44333 334334444899999999999999999999852
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 384 ~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 384 PRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp CBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 0347899998888889999999874
No 28
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.97 E-value=2.1e-29 Score=262.23 Aligned_cols=270 Identities=19% Similarity=0.244 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
.+|+.+++++||+++|+++++|| ++++|+..++.. + ....+..++..+|+
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 172 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA- 172 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC-
Confidence 47999999999999999999999 588887654310 0 01357788999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+... +..
T Consensus 173 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p------------------------~~~-------- 219 (430)
T 1ox0_A 173 -NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITP------------------------FAI-------- 219 (430)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHH--------
T ss_pred -CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH------------------------HHH--------
Confidence 46999999999999999999999999999999999999986430 000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
.. +. ..+.+ +.++.++. ..+| |+.
T Consensus 220 --------~~-----~~------~~~~l------------------------s~~~~p~~--------~~~p-Fd~---- 243 (430)
T 1ox0_A 220 --------AG-----FQ------ALTAL------------------------STTEDPTR--------ASIP-FDK---- 243 (430)
T ss_dssp --------HH-----HH------HTTCB------------------------CCCSSTTS--------SSCT-TBT----
T ss_pred --------HH-----HH------hCCCc------------------------cCCCCCCC--------CCCC-CCC----
Confidence 00 00 00111 10111110 1233 543
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+.+.++|||+++||++.+.|+++|.+++++|.|++.... .|+..+.+...+++++|+++||+++|||+||+|
T Consensus 244 -~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H 322 (430)
T 1ox0_A 244 -DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH 322 (430)
T ss_dssp -TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECC
T ss_pred -CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEe
Confidence 23566799999999999999999999999999999987642 344455677889999999999999999999999
Q ss_pred CCCHHHH----H-HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFASQF----V-YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~~~----~-~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
++++... . .+.+.+|- +-+||..+|. +|||+||+|+.++++++++|+++.
T Consensus 323 gtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 399 (430)
T 1ox0_A 323 GTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQ 399 (430)
T ss_dssp CCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSS
T ss_pred CCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCC
Confidence 9999763 2 23344554 3467777776 799999999999999999999863
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 400 ~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 400 GLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp CEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 0247899998888888899999864
No 29
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=1.4e-29 Score=263.06 Aligned_cols=276 Identities=19% Similarity=0.255 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------c-------------ccc-HHH----HH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------Q-------------RAS-ECR----MA 119 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------~-------------~~~-~a~----~~ 119 (462)
..+|+.+++++||+++|+++++|| +|++|+..++.. . .++ .+. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 467999999999999999999999 599998765320 0 011 133 88
Q ss_pred HHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHH
Q 012506 120 AFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVT 199 (462)
Q Consensus 120 a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 199 (462)
+..+|+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+.. +. . ..+.
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~---------~-----------~~~~- 208 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI---------V-----------VACF- 208 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH---------H-----------HHHH-
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH---------H-----------HHHH-
Confidence 889999 4699999999999999999999999999999999999999743 00 0 0000
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
.. .+.+.. +..|| |+. .+|
T Consensus 209 -----~~------------------------~~~ls~-------~~~~p------------~~~------------~rp- 227 (424)
T 1tqy_A 209 -----DA------------------------IRATTA-------RNDDP------------EHA------------SRP- 227 (424)
T ss_dssp -----HH------------------------TTCBCC-------CCSCG------------GGC------------CCT-
T ss_pred -----Hh------------------------hccccC-------CCCCC------------CCC------------ccC-
Confidence 00 011110 00011 222 233
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
|+. ..+...++||++++||++.+.|+++|.+++++|.|++.... .|...+.+...+++++|+++||+++|
T Consensus 228 fd~-----~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~d 302 (424)
T 1tqy_A 228 FDG-----TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATD 302 (424)
T ss_dssp TBT-----TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred CCC-----CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 543 23445589999999999999999999999999999988753 24444556688999999999999999
Q ss_pred ccEEEecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------
Q 012506 355 IDLFEINEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------- 415 (462)
Q Consensus 355 ID~~eihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------- 415 (462)
|||+|+|++++.. +...+ +.+|....++++++.+..+|||.||+|+.++++++++|+++.-
T Consensus 303 Id~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~ 382 (424)
T 1tqy_A 303 IDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD 382 (424)
T ss_dssp CCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred CCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence 9999999999874 44333 4455544566776666678999999999999999999998620
Q ss_pred -----------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 -----------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 -----------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++++++.++.||.+.++||++..
T Consensus 383 ~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 383 LDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp SCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred cccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 2488999988888888999998743
No 30
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.97 E-value=6.2e-30 Score=264.82 Aligned_cols=271 Identities=15% Similarity=0.170 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHcCC-CccccC----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl-~~~~Id----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
..+|+.+++++||+++|+ ++++|| ++++|+..+.. ......+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 888898 88888765320 001346788999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... .
T Consensus 157 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~-----------------------~------- 204 (412)
T 4ewg_A 157 L--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAV-----------------------A------- 204 (412)
T ss_dssp C--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------------H-------
T ss_pred C--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHH-----------------------H-------
Confidence 9 4699999999999999999999999999999999999999764100 0
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.+.+ .+.+. +.. .++++. .+| |+.
T Consensus 205 ----------------~~~~------~~~l~------------~~~-------~~p~~~------------~rp-fd~-- 228 (412)
T 4ewg_A 205 ----------------VFDT------LYATS------------TRN-------DEPHLT------------PRP-FDA-- 228 (412)
T ss_dssp ----------------HHHT------TTCBC------------CCT-------TCGGGC------------CCT-TBT--
T ss_pred ----------------HHHH------hhccc------------cCC-------CCCCCC------------CCC-CCC--
Confidence 0000 00000 000 011222 233 443
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++||+++||||+|+|
T Consensus 229 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H 305 (412)
T 4ewg_A 229 ---KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAH 305 (412)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ---CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 234556899999999999999999999999999999987642211 23456789999999999999999999999
Q ss_pred CCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
.+.+. .+...++ .+|- +++++..+..+|||+||+|+++++.++++|+++.
T Consensus 306 gtgt~~~D~~E~~al~~~~~~---~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~ 382 (412)
T 4ewg_A 306 GTSTDRGDVAESQATARTFGE---RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRG 382 (412)
T ss_dssp CCCCHHHHHHHHHHHHHHHCT---TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCS
T ss_pred CCCCccccHHHHHHHHHHcCC---CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccC
Confidence 99987 3444443 3442 2445555666899999999999999999999741
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 383 ~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 383 EARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp SCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 0237889988888889999999864
No 31
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.96 E-value=1.1e-27 Score=247.38 Aligned_cols=269 Identities=14% Similarity=0.193 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc-----EEEEeccCCC------------Cc--------------cccHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD-----IVVGTVLAPG------------SQ--------------RASECRMAAFY 122 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~-----vivG~~~~~~------------~~--------------~~~~a~~~a~~ 122 (462)
...+|+.+++++||+++|+++++||. |++|+..+.. .. ....+..++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35789999999999999999999987 9999876542 00 12467888999
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ +.|+++|+++|+|+++||+.|++.|++|++|++||+|+|.++.. +.. .
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~------------------------~~~--~- 200 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE------------------------MAC--E- 200 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH------------------------HHH--H-
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh------------------------HHH--H-
Confidence 999 47999999999999999999999999999999999999998641 000 0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
..++| .+..+ +.++| +. ..+| |+.
T Consensus 201 -~~~~~------------------------~ls~~------~~~~p------------~~------------~~~p-fd~ 224 (406)
T 2vba_A 201 -FDAMG------------------------ALSTK------YNDTP------------EK------------ASRT-YDA 224 (406)
T ss_dssp -HHHTT------------------------CBCCS------CTTSG------------GG------------SCCT-TBT
T ss_pred -Hhhcc------------------------ccccc------cCCCC------------cc------------ccCc-CcC
Confidence 00111 11000 00011 11 1233 443
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
..+...++||++++||++.+.|+++|.+++++|.|++.... .|+ +.+...+++++|+++| +||||
T Consensus 225 -----~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ 294 (406)
T 2vba_A 225 -----HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDY 294 (406)
T ss_dssp -----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCE
T ss_pred -----CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccE
Confidence 12444589999999999999999999999999999998754 233 4567789999999999 99999
Q ss_pred EEecCCCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C---
Q 012506 358 FEINEAFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R--- 415 (462)
Q Consensus 358 ~eihdafa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~--- 415 (462)
+|+|++++.. +... .+.+|... +++++-+..+|||+||+|+.+++.++++|+++. .
T Consensus 295 ve~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~ 372 (406)
T 2vba_A 295 LNSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN 372 (406)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE
T ss_pred EEeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccc
Confidence 9999999974 3322 33455443 344333445899999999999999999999863 1
Q ss_pred --------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 --------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 --------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++..+.||.+.++||++.
T Consensus 373 ~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 373 IVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp ECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred cCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 236888888888888889999863
No 32
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.95 E-value=5.1e-27 Score=264.07 Aligned_cols=272 Identities=20% Similarity=0.247 Sum_probs=210.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCCc-----------------cccHHHHHHHHcCCCCCcceE
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-----------------RASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~~-----------------~~~~a~~~a~~~Glp~~~p~~ 132 (462)
...+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 34679999999999999999999995 899987655420 11357789999999 46999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+|+++|+|++.||+.|++.|++|++|++||+|+|.++.... ..+
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~---------------------~~~--------------- 215 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV---------------------FVD--------------- 215 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH---------------------HHH---------------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH---------------------HHH---------------
Confidence 99999999999999999999999999999999999865100 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
+.+ .+ .+++|..+ +| |+. ..+..
T Consensus 216 ---------~~~------~~------------------------~ls~~g~~------------~~-Fd~-----~adG~ 238 (915)
T 2qo3_A 216 ---------FSR------QR------------------------ALAADGRS------------KA-FGA-----GADGF 238 (915)
T ss_dssp ---------HHT------TT------------------------CBCSSCCC------------CT-TBT-----TCCCB
T ss_pred ---------Hhh------hc------------------------ccCCCCCc------------cc-ccC-----CCCce
Confidence 000 00 01222222 22 443 12455
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
..+||+++|||++.+.|++.|.+++++|.|++........ .+.+...+++++|+++||+++||||+|+|++++..
T Consensus 239 v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~ 318 (915)
T 2qo3_A 239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTAL 318 (915)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTT
T ss_pred eecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCcc
Confidence 5899999999999999999999999999999987532211 12345789999999999999999999999998753
Q ss_pred ----H-HHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------------
Q 012506 368 ----F-VYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------------- 414 (462)
Q Consensus 368 ----~-~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------------- 414 (462)
+ ..+.+.+|.. ..++|+++++..+||+.||+|+.++++++.+|+++.
T Consensus 319 gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 398 (915)
T 2qo3_A 319 GDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLA 398 (915)
T ss_dssp THHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECS
T ss_pred CCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeec
Confidence 3 3344667764 347899999999999999999999999999999852
Q ss_pred --------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 --------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 --------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++.++.||.+..+||+...
T Consensus 399 ~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 399 GNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 12378888888888899999998754
No 33
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.95 E-value=5.4e-27 Score=263.91 Aligned_cols=270 Identities=21% Similarity=0.301 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCCc------------------cccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~~------------------~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++++||+++|+++++||. |++|+...++.. ....+..++..+|+ ++|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeEe
Confidence 468999999999999999999996 889987655421 11357789999999 469999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|+|++.||+.|++.|++|++|++||+|+|.++.... ..+
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~---------------------~~~---------------- 237 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGA---------------------FTE---------------- 237 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHH---------------------HHH----------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhh---------------------hHh----------------
Confidence 9999999999999999999999999999999999876210 000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~ 293 (462)
+. ..| .+++|..+ +| |+ +..|.+.
T Consensus 238 --------~~------~~~------------------------~ls~~g~~------------~p-Fd-----~~adG~~ 261 (917)
T 2hg4_A 238 --------FR------SQG------------------------GLAADGRC------------KP-FS-----KAADGFG 261 (917)
T ss_dssp --------HT------TSS------------------------CBCTTSCC------------CT-TB-----TTCCCBC
T ss_pred --------hh------hcc------------------------CcCCcccc------------Cc-cc-----ccccCCC
Confidence 00 000 12222222 33 43 3456677
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC-----CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH-
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM-----GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ- 367 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~-----~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~- 367 (462)
.+||+++|||++.+.|++.|.+++++|.|++.+....... +.+...+++++|+++||+++|||++|+|++++..
T Consensus 262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g 341 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG 341 (917)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH
T ss_pred CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC
Confidence 9999999999999999999999999999999876544322 1234579999999999999999999999999953
Q ss_pred ---HH-HHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------------
Q 012506 368 ---FV-YCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------------- 414 (462)
Q Consensus 368 ---~~-~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------- 414 (462)
+. .+.+.+|.. ..++|+++++..+||+.+|+|+..+++++.+|+++.
T Consensus 342 D~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~ 421 (917)
T 2hg4_A 342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ 421 (917)
T ss_dssp HHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCS
T ss_pred cHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCC
Confidence 33 233445653 247899999999999999999999999999999752
Q ss_pred -------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++.++.||.+..+||+...
T Consensus 422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 01368888888888899999998754
No 34
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.95 E-value=4.7e-27 Score=233.90 Aligned_cols=256 Identities=21% Similarity=0.215 Sum_probs=191.0
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
+|++.+ ++...++.++.+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ .+|+++++++|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC 112 (313)
T 1zow_A 36 MTGIKE-RHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAAC 112 (313)
T ss_dssp HHCCSE-EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECGG
T ss_pred hhCceE-EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCcC
Confidence 566654 345567889999999999999999999999999999999877654 567789999999996 48999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|+++||..|+++|++|++|++|++|+|.++...
T Consensus 113 as~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------- 146 (313)
T 1zow_A 113 SGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT---------------------------------------------- 146 (313)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc----------------------------------------------
Confidence 9999999999999999999999999999986510
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
+|. ++ .++...+|||
T Consensus 147 ----------------------------~~~-------------------------------d~------~~~~~~gdGa 161 (313)
T 1zow_A 147 ----------------------------DLT-------------------------------DR------STAVLFGDGA 161 (313)
T ss_dssp ----------------------------CTT-------------------------------CH------HHHTTBCEEE
T ss_pred ----------------------------Ccc-------------------------------cc------cceeeeccce
Confidence 000 00 0112269999
Q ss_pred eEEEEeCHHHHHhcCCCceEE-EEEEEEec---cCCC-----CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 299 GAVLLMKRSVAMRKGLPILGV-FRTFAAVG---VDPA-----IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~~-i~g~~~~~---~~p~-----~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+|+||.+.+. +.++++. +.+.+... .-|. .+ + .....+++++|+++|++++|||+|++
T Consensus 162 ~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~ 237 (313)
T 1zow_A 162 GAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIP 237 (313)
T ss_dssp EEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred EEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 9999987653 1223321 22211100 0011 01 1 13356899999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEE
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
|++++.....+.+.||++++++..+ +..+||+.++++...+.+++++-+-+.+ ++.|+.. .|+|+.. +++|+
T Consensus 238 H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g--~~vl~~~-~G~G~t~~~~~l~ 310 (313)
T 1zow_A 238 HQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDD--DTIVLVG-FGGGLTWGAMTIK 310 (313)
T ss_dssp CCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhheEEEEE
Confidence 9999999888889999998876654 4569999999999999888766332334 6777765 4555555 44554
No 35
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.94 E-value=2.5e-26 Score=228.12 Aligned_cols=242 Identities=17% Similarity=0.169 Sum_probs=183.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ ..|+++++++|+|++.||..|+++|
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i 125 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFI 125 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999877654 567899999999996 4799999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|++|++|++|+|.++...
T Consensus 126 ~~g~~~~vlv~g~e~~s~~~------------------------------------------------------------ 145 (309)
T 2ebd_A 126 KSGKAKNVLVIGAEKLSEAV------------------------------------------------------------ 145 (309)
T ss_dssp HTTSCSEEEEEEEEEGGGTC------------------------------------------------------------
T ss_pred HCCCCCEEEEEEeccccccc------------------------------------------------------------
Confidence 99999999999999986410
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|. ...++...+|||+|+||++.+.++
T Consensus 146 --------------~~~-------------------------------------~~~~~~~~gdGaaA~vL~~~~~~~-- 172 (309)
T 2ebd_A 146 --------------DWE-------------------------------------DRSTCVLFGDGAGAVVVTRSEDKS-- 172 (309)
T ss_dssp --------------CTT-------------------------------------CTTTTTTBCEEEEEEEEEECSSSC--
T ss_pred --------------Ccc-------------------------------------chhhccccccccEEEEEEecCCCC--
Confidence 000 001123479999999999876431
Q ss_pred CCCceEEEEEEEEec----cCC-----CCCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHc
Q 012506 313 GLPILGVFRTFAAVG----VDP-----AIMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL 375 (462)
Q Consensus 313 g~~~~~~i~g~~~~~----~~p-----~~~~~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~L 375 (462)
.+++...+..... ..| ...+. ....+++++|+++|++++|||+|++|++++.....+.+.|
T Consensus 173 --~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~l 250 (309)
T 2ebd_A 173 --DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKL 250 (309)
T ss_dssp --EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHT
T ss_pred --ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHh
Confidence 1333222211000 011 00111 3357899999999999999999999999999888888999
Q ss_pred CCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE-EE
Q 012506 376 GLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA-VF 436 (462)
Q Consensus 376 Gl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~-v~ 436 (462)
|++++++..+ +..+||+.+|++..++.+++++-+-+.+ ++.|+.. .|.|+..+. +|
T Consensus 251 g~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G--~~~l~~~-~G~G~~~~~~~l 307 (309)
T 2ebd_A 251 NIPKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRG--DLILMTA-MGGGLTWGAVLL 307 (309)
T ss_dssp TCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETTTEEEEEEE
T ss_pred CCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhhEEEEE
Confidence 9998877644 4569999999999999999876222233 6666665 455655544 44
No 36
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.94 E-value=1.3e-25 Score=224.47 Aligned_cols=246 Identities=20% Similarity=0.178 Sum_probs=185.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|+ ++|+++++++|+|+++||..|++
T Consensus 46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~ 122 (322)
T 1ub7_A 46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 122 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999876653 45688999999999 58999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|++|++|++|+|.++...
T Consensus 123 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 144 (322)
T 1ub7_A 123 LVEAGLAQKVLAVGAEALSKII---------------------------------------------------------- 144 (322)
T ss_dssp HHHTTSCSEEEEEEEECGGGTS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEechhcccc----------------------------------------------------------
Confidence 9999999999999999986510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + ..+....+|||+|+||.+.+.
T Consensus 145 ----------------~~~-------------------------------d------~~~~~~~GdGA~A~vL~~~~~-- 169 (322)
T 1ub7_A 145 ----------------DWN-------------------------------D------RATAVLFGDGGGAAVVGKVRE-- 169 (322)
T ss_dssp ----------------CTT-------------------------------C------HHHHTTBCCEEEEEEEECCCT--
T ss_pred ----------------Chh-------------------------------h------cccceeeccccEEEEEEecCC--
Confidence 000 0 001112699999999987653
Q ss_pred hcCCCceEEE-EEEEEec----c------CCCC---------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 311 RKGLPILGVF-RTFAAVG----V------DPAI---------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~----~------~p~~---------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+..+++.. .+.+... . .|.. .+ .....+++++|+++|++++|||+|++|+
T Consensus 170 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~ 247 (322)
T 1ub7_A 170 --GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQ 247 (322)
T ss_dssp --TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred --CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 22233333 1111100 0 0221 01 1345789999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.....+.+.||++++++..+ +..+||+.+|++...+.+++++-+-+.+ ++.|+...+.|+...+++|+.
T Consensus 248 ~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g~~~~g--~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 248 ANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREG--DHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp SCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTT--CEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEEEChhheeEEEEEEe
Confidence 99998888889999998877654 4469999999999988888765332334 677777655544555667764
No 37
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.94 E-value=9.5e-26 Score=226.58 Aligned_cols=248 Identities=17% Similarity=0.171 Sum_probs=182.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHH
Q 012506 68 GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVAD 147 (462)
Q Consensus 68 g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~ 147 (462)
...++.+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++|+++++.+|+|+++||..
T Consensus 54 ~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~ 131 (335)
T 1u6e_A 54 FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGA 131 (335)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHH
Confidence 3446789999999999999999999999999999999877654 567899999999995 68999999999999999999
Q ss_pred HHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 012506 148 VAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 227 (462)
Q Consensus 148 Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~ 227 (462)
|+++|++|.+|++||+|+|.++...
T Consensus 132 A~~~i~~g~~~~vLv~g~e~~s~~~------------------------------------------------------- 156 (335)
T 1u6e_A 132 AADMIRGGGAATMLVVGTEKLSPTI------------------------------------------------------- 156 (335)
T ss_dssp HHHHHHHTSCSSEEEEEEEECGGGC-------------------------------------------------------
T ss_pred HHHHHHcCCCCEEEEEEEccccccc-------------------------------------------------------
Confidence 9999999999999999999986410
Q ss_pred HHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHH
Q 012506 228 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 307 (462)
Q Consensus 228 a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e 307 (462)
+|. + ..++...+|||+|+||.+.+
T Consensus 157 -------------------~~~-------------------------------d------~~~~~~~gDGA~A~vl~~~~ 180 (335)
T 1u6e_A 157 -------------------DMY-------------------------------D------RGNCFIFADGAAAVVVGETP 180 (335)
T ss_dssp -------------------CTT-------------------------------C------TTTTTTBCEEEEEEEEEECS
T ss_pred -------------------Ccc-------------------------------c------cccceEeccccEEEEEEecC
Confidence 010 0 01233479999999998765
Q ss_pred HHHhcCCCceEEEEEE-EEec----c---------CCC------CC-C--------ccHHHHHHHHHHHcCCCCCCccEE
Q 012506 308 VAMRKGLPILGVFRTF-AAVG----V---------DPA------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 308 ~A~~~g~~~~~~i~g~-~~~~----~---------~p~------~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
. .+ ++..+.+. +... . .|. .+ + .....+++++|+++|++++|||+|
T Consensus 181 ~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~ 255 (335)
T 1u6e_A 181 F---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVF 255 (335)
T ss_dssp S---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred C---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 3 12 22222221 1000 0 111 01 1 123468899999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 359 EINEAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
++|++++.....+.+.||++++ ++..+ .-.+||+.+++....+.+++.+-+-+.+ ++.|+... |+|+.. +++|
T Consensus 256 ~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g--~~~l~~~~-G~G~t~~~~vl 330 (335)
T 1u6e_A 256 VPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTGAAKPG--DLALLIGY-GAGLSYAAQVV 330 (335)
T ss_dssp EECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTT--CEEEEEEE-ETTTEEEEEEE
T ss_pred EECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEEE-ehhheeEEEEE
Confidence 9999999999999999999988 65544 3459999999976555555443221223 67777764 555555 5555
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
+.
T Consensus 331 ~~ 332 (335)
T 1u6e_A 331 RM 332 (335)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 38
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.93 E-value=5.3e-25 Score=221.51 Aligned_cols=255 Identities=22% Similarity=0.184 Sum_probs=186.3
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
||++.+ ++...++.+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+|.++|+++++.+|
T Consensus 50 rtgi~~-r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C 127 (333)
T 4dfe_A 50 RTGIHA-RYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGAAFDVQAVC 127 (333)
T ss_dssp HHCCSE-EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCEEEEEECGG
T ss_pred hcCceE-EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCcEEEeCccc
Confidence 455554 334557889999999999999999999999999999999887665 677899999999997789999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|+++||..|+++|++|.++++|++|+|.+|...
T Consensus 128 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------- 161 (333)
T 4dfe_A 128 SGFAYAVATADSFIRSGQHRTALVIGAETFSRIL---------------------------------------------- 161 (333)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc----------------------------------------------
Confidence 9999999999999999999999999999987610
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
++. | ...+...+|||
T Consensus 162 ----------------------------~~~-----------d--------------------------~~~~~lfGDGA 176 (333)
T 4dfe_A 162 ----------------------------DFK-----------D--------------------------RTTCVLFGDGA 176 (333)
T ss_dssp ----------------------------CTT-----------C--------------------------TTTTTTBCEEE
T ss_pred ----------------------------Ccc-----------c--------------------------ccceeeecccc
Confidence 000 0 00122369999
Q ss_pred eEEEEeCHHHHHhcCCCceEEEEE-EEEec---cCC-----------C--CCC---------ccHHHHHHHHHHHcCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILGVFRT-FAAVG---VDP-----------A--IMG---------VGPAVAIPAAVKSAGLQL 352 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~~i~g-~~~~~---~~p-----------~--~~~---------~~~~~Ai~~aL~~AGl~~ 352 (462)
+|+||.+.+. ..++..... .+... ..| . .|. .....+++++|+++|+++
T Consensus 177 ~A~vl~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 251 (333)
T 4dfe_A 177 GAVILQASDE-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA 251 (333)
T ss_dssp EEEEEEEESS-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEEEEEcCC-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999987651 122211111 00000 000 0 010 112467889999999999
Q ss_pred CCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 353 DDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 353 ~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
+|||+|.+|+++..+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.|... .|.|+.+
T Consensus 252 ~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~ 326 (333)
T 4dfe_A 252 EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRG--QNVLIEG-VGGGFTW 326 (333)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEE
T ss_pred HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Echhhee
Confidence 999999999999999999999999999987764 3458999999876666666543222223 4555543 5667666
Q ss_pred EEEE
Q 012506 433 AAVF 436 (462)
Q Consensus 433 A~v~ 436 (462)
+.++
T Consensus 327 ~~~l 330 (333)
T 4dfe_A 327 GASV 330 (333)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 39
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.93 E-value=1.1e-24 Score=245.98 Aligned_cols=264 Identities=21% Similarity=0.220 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++++||+++|+++++|| ++++|+...+.. .....+..++..+|+ ++|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCeee
Confidence 45999999999999999999999 688886544320 123467889999999 579999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|+|+++||++|++.|++|++|++||+|+|.|+.... ..+
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~---------------------~~~---------------- 201 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT---------------------SVQ---------------- 201 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH---------------------HHH----------------
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999875100 000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNS 291 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~ 291 (462)
+.+. +. +++|..+ +| |+. +|..
T Consensus 202 --------~~~~------~~------------------------ls~~g~~------------~~-Fd~~adG~~----- 225 (965)
T 3hhd_A 202 --------FLRL------GM------------------------LSPEGTC------------KA-FDTAGNGYC----- 225 (965)
T ss_dssp --------HHHH------TC------------------------BCTTCCC------------CT-TBTTCCSBC-----
T ss_pred --------HHhc------cC------------------------cCCCCcc------------cc-chhccCCcc-----
Confidence 0000 00 1122222 22 443 3333
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC------ccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+||+++|||++.+.|+ +++++|+|++.+.......+ .+...+++++|++|||+++||||+|.|.+++
T Consensus 226 --~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT 299 (965)
T 3hhd_A 226 --RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT 299 (965)
T ss_dssp --BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred --ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence 69999999999999886 48899999998875544222 2356899999999999999999999999999
Q ss_pred H----HHHHHH-HHcCCC-CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 366 S----QFVYCR-NKLGLD-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 366 ~----~~~~~~-e~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
. .+...+ +.++-. ..++.+.+-+..+||+.||+|+.+++.++.+|+++.-
T Consensus 300 ~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~ 379 (965)
T 3hhd_A 300 KVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVV 379 (965)
T ss_dssp TTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeec
Confidence 4 454444 445533 2355555555558999999999999999999998620
Q ss_pred ------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++++++..+.||.+.++||+...
T Consensus 380 ~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 380 DQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 0135667777788899999998754
No 40
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.93 E-value=3.1e-25 Score=270.14 Aligned_cols=280 Identities=15% Similarity=0.180 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC--------cEEEEeccCCCCc-----------------------cccH-HHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG--------DIVVGTVLAPGSQ-----------------------RASE-CRMAAFY 122 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id--------~vivG~~~~~~~~-----------------------~~~~-a~~~a~~ 122 (462)
...|+.+++++||+++|+++++|+ ++++|+..+.... .... ++.+..+
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 5888876432100 0112 3333446
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHH-H
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTS-E 201 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a-~ 201 (462)
+|+ ++|+++|+++|+|+++||+.|++.|++|++|++||+|+|.|+...+ ..+..|+..+ .
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~-----------------~~f~~~~als~~ 2787 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAI-----------------IGFGDMAATADT 2787 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------HHHHHHTCBCCH
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHH-----------------HHHHHhhhhhcc
Confidence 799 5799999999999999999999999999999999999999865110 0000010000 0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
.++..++. +| +.. .+| |+
T Consensus 2788 ~~~~~~~~-------------------------------------sp------------~~~------------crp-Fd 2805 (3089)
T 3zen_D 2788 EMMRAKGI-------------------------------------SD------------SKF------------SRA-ND 2805 (3089)
T ss_dssp HHHHHTTC-------------------------------------CT------------TTS------------CCS-SB
T ss_pred hhhhhccC-------------------------------------Cc------------ccc------------cCc-cc
Confidence 01111110 11 122 233 43
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC-------------ccHHHHHHHHHH
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-------------VGPAVAIPAAVK 346 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~-------------~~~~~Ai~~aL~ 346 (462)
. +|.+ ++||++++||++.+.|+++|.+|++.|.+++.+. ++..++ .+...+++++|+
T Consensus 2806 ~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~-Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~ 2877 (3089)
T 3zen_D 2806 RRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFA-DGVHTSIPAPGLGALGAARGGRESTLARSLA 2877 (3089)
T ss_dssp TTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEC-CCCCCCSSCCCCGGGGGSTTGGGSHHHHHHH
T ss_pred cCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEec-CCcccCccCCchhHHhHhhhhHHHHHHHHHH
Confidence 2 3443 7999999999999999999999999776666543 222211 122358999999
Q ss_pred HcCCCCCCccEEEecCCCHH----HHH----HHHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--
Q 012506 347 SAGLQLDDIDLFEINEAFAS----QFV----YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-- 415 (462)
Q Consensus 347 ~AGl~~~DID~~eihdafa~----~~~----~~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-- 415 (462)
++||+++||||+|.|++++. .+. .+.+.||... .++|+++++..+|||.||+|+.+++.++.+|+++.-
T Consensus 2878 ~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPp 2957 (3089)
T 3zen_D 2878 QLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPP 2957 (3089)
T ss_dssp TTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCC
T ss_pred HcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCC
Confidence 99999999999999999886 333 3556788775 689999999999999999999999999999997520
Q ss_pred ------------------------------CCcEEEEEeecccceeEEEEEEeccccc
Q 012506 416 ------------------------------DCRFGVISMCIGTGMGAAAVFERGDCAD 443 (462)
Q Consensus 416 ------------------------------~~~~gl~~~~~G~G~g~A~v~~~~~~~~ 443 (462)
+.++++++..+.||.++.+||+..+...
T Consensus 2958 t~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~~ 3015 (3089)
T 3zen_D 2958 NRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAFI 3015 (3089)
T ss_dssp CTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGTG
T ss_pred CCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchhh
Confidence 1368888888888899999999865543
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.92 E-value=1.8e-24 Score=215.79 Aligned_cols=242 Identities=17% Similarity=0.218 Sum_probs=182.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.|++|+..++.. .+..+..++..+|++ .+|+++++++|+|+++||..|++
T Consensus 47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~ 124 (317)
T 1hnj_A 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (317)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999877654 567899999999996 48999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|++|++|++|+|.++...
T Consensus 125 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 146 (317)
T 1hnj_A 125 YVKSGAVKYALVVGSDVLARTC---------------------------------------------------------- 146 (317)
T ss_dssp HHHTTSCSEEEEEEEECHHHHS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999975410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + .+....+|||+|+||.+.+.
T Consensus 147 ----------------~~~------------d-------------------~------~~~~~~GdGA~A~vL~~~~~-- 171 (317)
T 1hnj_A 147 ----------------DPT------------D-------------------R------GTIIIFGDGAGAAVLAASEE-- 171 (317)
T ss_dssp ----------------CTT------------C-------------------H------HHHTTBCCEEEEEEEEEESS--
T ss_pred ----------------Cch------------h-------------------c------ccceeeccccEEEEEEecCC--
Confidence 000 0 0 00112699999999987652
Q ss_pred hcCCCceEEEEEE-EEec---cCCC-------------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 311 RKGLPILGVFRTF-AAVG---VDPA-------------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~~~~---~~p~-------------~~~~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
..+++.+.+. +... ..|. ..+. ....+++++|+++|++++|||+|++|..++
T Consensus 172 ---~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~ 248 (317)
T 1hnj_A 172 ---PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANL 248 (317)
T ss_dssp ---CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCH
T ss_pred ---CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 2355544432 1100 0111 0011 335789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 366 SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
.....+.+.||++++++..+ +-.+||..++++...+.+++.+-+-+.+ ++.|... .|.|+.++.+
T Consensus 249 ~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~t~~~~ 313 (317)
T 1hnj_A 249 RIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDGRIKPG--QLVLLEA-FGGGFTWGSA 313 (317)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEEEEE
T ss_pred HHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EchhheeEEE
Confidence 98888889999998877543 3459999999999888887754222234 5555554 4566666443
No 42
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.92 E-value=1.9e-23 Score=209.41 Aligned_cols=243 Identities=16% Similarity=0.149 Sum_probs=179.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 53 ~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~ 130 (323)
T 3il3_A 53 AEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVAD 130 (323)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999887665 577899999999996 7899999999999999999999
Q ss_pred HHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229 (462)
Q Consensus 150 ~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~ 229 (462)
++|++|.++++|++|+|.||....
T Consensus 131 ~~i~~g~~~~vLvvg~e~~s~~~~-------------------------------------------------------- 154 (323)
T 3il3_A 131 QFIRAGKVKKALVIGSDLNSRKLD-------------------------------------------------------- 154 (323)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGSCC--------------------------------------------------------
T ss_pred HHHHCCCCCEEEEEEeeccccccC--------------------------------------------------------
Confidence 999999999999999999976210
Q ss_pred HcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHH
Q 012506 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 309 (462)
Q Consensus 230 ~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A 309 (462)
+. | | ..+...+|||+|+||.+.+
T Consensus 155 ------------------~~-----------d---~-----------------------~~~~lfGDGA~A~vl~~~~-- 177 (323)
T 3il3_A 155 ------------------ET-----------D---R-----------------------STVVLFGDGAGAVILEASE-- 177 (323)
T ss_dssp ------------------TT-----------C---T-----------------------TTTTTBCEEEEEEEEEEES--
T ss_pred ------------------cc-----------c---c-----------------------ccccccccceEEEEEEEcC--
Confidence 00 0 0 0122369999999998754
Q ss_pred HhcCCCceEEEEEE-EEec---cCCC---------CCC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 310 MRKGLPILGVFRTF-AAVG---VDPA---------IMG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 310 ~~~g~~~~~~i~g~-~~~~---~~p~---------~~~-~~----------~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
+..++...... +... .-|. .+. .+ ...+++++|+++|++++|||+|-+|+++.
T Consensus 178 ---~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~ 254 (323)
T 3il3_A 178 ---QEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANL 254 (323)
T ss_dssp ---SCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCH
T ss_pred ---CCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 11222211111 0000 0010 000 01 13567889999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 366 SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
.+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.| ++.+... .|.|+.++.+
T Consensus 255 ~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~ 319 (323)
T 3il3_A 255 RIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRG--QLLLLEA-FGGGWTWGSA 319 (323)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTT--CEEEEEE-EETTTEEEEE
T ss_pred HHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EehhheeEEE
Confidence 99999999999999987764 4458999999977766666543222233 4555543 5667666443
No 43
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.92 E-value=6.5e-24 Score=213.88 Aligned_cols=245 Identities=20% Similarity=0.148 Sum_probs=182.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ .+|+++++++|+|+++||..|++
T Consensus 56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999877664 567889999999996 48999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.+|++||+|+|.++...
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~~---------------------------------------------------------- 155 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDVI---------------------------------------------------------- 155 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGGS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEccccccc----------------------------------------------------------
Confidence 9999999999999999986410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. | + .+....+|||+|+||.+.+.
T Consensus 156 ----------------~~~-----------d--------------------~------~~~~~~GdGA~A~vL~~~~~-- 180 (339)
T 1mzj_A 156 ----------------DLA-----------D--------------------R------SLSFLFGDGAGAAVVGPSDV-- 180 (339)
T ss_dssp ----------------CSS-----------C--------------------T------TTTTTBCEEEEEEEEEEESS--
T ss_pred ----------------Ccc-----------c--------------------c------ccceEeccCceEEEEEecCC--
Confidence 000 0 0 01122689999999987642
Q ss_pred hcCCCceEEE-EEEEEec----cC---CCC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 311 RKGLPILGVF-RTFAAVG----VD---PAI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~----~~---p~~-------------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
.++++.. .+.+... .. |.. .+ .....+++++|+++|++++|||+|++|
T Consensus 181 ---~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H 257 (339)
T 1mzj_A 181 ---PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPH 257 (339)
T ss_dssp ---CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEC
T ss_pred ---CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 1233222 2211100 00 110 01 123568999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEe
Q 012506 362 EAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
.++......+.+.||++++ ++..+ .-.+||..+|++...+.+++.+-+-+.+ ++.|... .|.|+.. +++|+.
T Consensus 258 ~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~~~~G--~~vll~~-~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 258 QANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGAVPGG--GPALMIG-FGAGLSYAGQALLL 331 (339)
T ss_dssp CSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTSSCTT--CEEEEEE-EETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhheeEEEEEEe
Confidence 9999988888899999988 76433 4459999999999988887765333334 5666655 4555555 445543
No 44
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.91 E-value=1.6e-23 Score=210.43 Aligned_cols=244 Identities=18% Similarity=0.192 Sum_probs=179.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|+ ++||.|++++..++.. .+..+..++..+|++ .+|+++++++|+|+++||..|+++|
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i 126 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLI 126 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHH
Confidence 67899999999999999999 8999999998877653 456789999999996 4899999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+|++||+|+|.++... .+ . .+
T Consensus 127 ~~g~~~~vLv~g~e~~s~~~-~~--------~-------------------------d~--------------------- 151 (331)
T 2x3e_A 127 SAGLADSALLVGVDTFSHTL-DP--------A-------------------------DR--------------------- 151 (331)
T ss_dssp HTTSCSEEEEEEEECGGGGS-CT--------T-------------------------CH---------------------
T ss_pred HcCCCCEEEEEEeeccccCC-Cc--------c-------------------------cc---------------------
Confidence 99999999999999986410 00 0 00
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
.++...+|||+|+||.+.+.| .
T Consensus 152 --------------------------------------------------------~~~~~~GdGA~A~vL~~~~~a--~ 173 (331)
T 2x3e_A 152 --------------------------------------------------------STRALFGDGAGAVVLRAGDAE--E 173 (331)
T ss_dssp --------------------------------------------------------HHHHHBCCEEEEEEEEEECTT--S
T ss_pred --------------------------------------------------------ccceeeccccEEEEEEecCCC--C
Confidence 000115899999999876644 1
Q ss_pred CCCceEEEEEEEEeccC----CC---------------CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 313 GLPILGVFRTFAAVGVD----PA---------------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~----p~---------------~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
+.++++..........+ |. .+ + .....+++++|+++|++++|||+|.+|.++
T Consensus 174 ~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~ 253 (331)
T 2x3e_A 174 EGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQAN 253 (331)
T ss_dssp TTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCC
T ss_pred CCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 22333322111000000 10 00 1 123568999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
......+.+.||++++++..+ .-.+||+.+|+....+.+++.+-+-+.+ ++.|... .|.|+.. +++|+-
T Consensus 254 ~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 254 TRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDG--GNMVLTG-FGAGLTWGSVALRW 323 (331)
T ss_dssp HHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EeHHhhheeeEEEE
Confidence 999888899999998877653 3459999999998888877765333334 6666665 4555555 445543
No 45
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.91 E-value=5.3e-23 Score=208.70 Aligned_cols=246 Identities=15% Similarity=0.088 Sum_probs=184.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+|.++++++++.+|+|+++||..|++
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 140 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN 140 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999887665 678899999999997689999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++|++|+|.+|....
T Consensus 141 ~i~~g~~~~vLvvg~e~~s~~~~--------------------------------------------------------- 163 (354)
T 4efi_A 141 LIQTGAAKRVLLAVGDTISKMID--------------------------------------------------------- 163 (354)
T ss_dssp HHHTTSCSEEEEEEEECGGGGCC---------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccCC---------------------------------------------------------
Confidence 99999999999999999976210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. | ...+...+|||+|+||.+.+..
T Consensus 164 -----------------~~-----------d--------------------------~~~~~lfGDGA~A~vl~~~~~~- 188 (354)
T 4efi_A 164 -----------------PT-----------D--------------------------RSTSLLFGDAGTMTALETSNGD- 188 (354)
T ss_dssp -----------------TT-----------C--------------------------HHHHTTBCCEEEEEEEEECCSC-
T ss_pred -----------------cc-----------c--------------------------cccccccccceeEEEEeecCCC-
Confidence 00 0 0001125899999999875421
Q ss_pred hcCCCceEE-EEEEEEe---------ccCCC--------------CCCc-c----------HHHHHHHHHHHcCCCCCCc
Q 012506 311 RKGLPILGV-FRTFAAV---------GVDPA--------------IMGV-G----------PAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 311 ~~g~~~~~~-i~g~~~~---------~~~p~--------------~~~~-~----------~~~Ai~~aL~~AGl~~~DI 355 (462)
..+.. +...+.. +..|. .+.. + ...+++++|+++|++++||
T Consensus 189 ----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~di 264 (354)
T 4efi_A 189 ----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSY 264 (354)
T ss_dssp ----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 12211 1111100 00010 0000 1 1346789999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE-
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA- 434 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~- 434 (462)
|+|-+|+++..+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.+... .|.|+.++.
T Consensus 265 d~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-fG~G~t~~~~ 339 (354)
T 4efi_A 265 DAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEET--LQLGMFG-FGVGYSWASA 339 (354)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSC--EEEEEEE-EETTTEEEEE
T ss_pred CEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-Echhhhheee
Confidence 999999999999999999999999987654 4559999999988888888766444444 4555544 566777654
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+-
T Consensus 340 ll~~ 343 (354)
T 4efi_A 340 ALAV 343 (354)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 46
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.90 E-value=7.7e-23 Score=206.73 Aligned_cols=259 Identities=14% Similarity=0.155 Sum_probs=183.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++.++++++++.+|+|+++||..|++
T Consensus 64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 142 (345)
T 3s21_A 64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAAR 142 (345)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999887665 567899999999997679999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|.||.. .+ ....++
T Consensus 143 ~i~~g~~~~vLvvg~e~~s~~------------~~------------~~~~~~--------------------------- 171 (345)
T 3s21_A 143 MLERGEIDYALVVDGETANLV------------YE------------KTLERM--------------------------- 171 (345)
T ss_dssp HHHHTSCSEEEEEEEECCHHH------------HH------------HHHHHH---------------------------
T ss_pred HHHCCCCCEEEEEEEcccchh------------hc------------cccccc---------------------------
Confidence 999999999999999998751 00 000000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ .| + .+.+. |+. ..+....+|||+|+||.+.+...
T Consensus 172 ---~------------~~-------------~-----~~~~~-------f~~-----~~~~~~~GdGA~A~vl~~~~~~~ 206 (345)
T 3s21_A 172 ---T------------SP-------------D-----VTEEE-------FRN-----ELAALTLGCGAAAMVMARSELVP 206 (345)
T ss_dssp ---T------------CT-------------T-----CCHHH-------HHH-----HHGGGGBCCEEEEEEEEEGGGST
T ss_pred ---c------------CC-------------c-----cchhh-------hhh-----hccceeeccceeEEEEecCCCCC
Confidence 0 00 0 00000 100 00112369999999999865321
Q ss_pred hcCCCceEEEEEEEEecc----C---C--C--CCC-c--------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV----D---P--A--IMG-V--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~----~---p--~--~~~-~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
. +. .+.+...... + + . .|. . ....+++++|+++|++++|||+|.+|+++..+...
T Consensus 207 ~-~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~ 281 (345)
T 3s21_A 207 D-AP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAA 281 (345)
T ss_dssp T-SC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHH
T ss_pred C-Cc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHH
Confidence 0 11 2333332211 0 0 0 011 0 11356778999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 371 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+.+.||++++++..+ .--+||...|+-...+.+++.+-+-+.+ ++.+... .|.|+.++.++
T Consensus 282 ~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~~ 342 (345)
T 3s21_A 282 FVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKG--DRIALLG-IGSGLNCSMAE 342 (345)
T ss_dssp HHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTT--CEEEEEE-EETTTEEEEEE
T ss_pred HHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EChhhhheEEE
Confidence 999999999887543 3458999999988877777765322334 5555544 56676665443
No 47
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.90 E-value=3e-24 Score=220.04 Aligned_cols=248 Identities=13% Similarity=0.094 Sum_probs=179.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~ 150 (462)
+.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++++++ +.+|+|+++||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-M-MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-C-SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999988763 2 56788999999999755799999 9999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|.++...... + ..+
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~~~~---------------d-----------------~~~------------------- 187 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCYQPT---------------D-----------------LGV------------------- 187 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGCCTT---------------C-----------------CSH-------------------
T ss_pred HHHcCCCCEEEEEEEeccchhcCcc---------------c-----------------CCH-------------------
Confidence 9999999999999999986511000 0 000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ +..+....+|||+|+||.+.+.
T Consensus 188 ----------------------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~-- 210 (382)
T 1u0m_A 188 ----------------------------------------G---------------SLLCNGLFGDGIAAAVVRGRGG-- 210 (382)
T ss_dssp ----------------------------------------H---------------HHHHHHHBCEEEEEEEEETTTC--
T ss_pred ----------------------------------------H---------------HhhccchhcCCcEEEEEeccCC--
Confidence 0 0000112589999999987642
Q ss_pred hcCCCceEEEEEEEEe--cc------------------CCCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 311 RKGLPILGVFRTFAAV--GV------------------DPAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~--~~------------------~p~~~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.+ .+|.++... .. .++.+ ..+.. +++++|+++|++++|||+|++|+++..+
T Consensus 211 -~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i 284 (382)
T 1u0m_A 211 -TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRI 284 (382)
T ss_dssp -SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHH
T ss_pred -CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence 12 234443321 00 00111 11234 8999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCC-CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEEEe
Q 012506 368 FVYCRNKLGLDPEKINVNG-GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~G-G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
...+.+.||+++++++++. -.-.+||+.+++....+.+++.+-+-+.| ++.|... .|.|+.++ ++|+.
T Consensus 285 ~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 285 LDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEG--ARGLLAG-FGPGITAEMSLGCW 354 (382)
T ss_dssp HHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSS--CCCEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCC--CEEEEEE-EcccceeEEEEEEE
Confidence 8889999999999876531 12348999999988888777765332333 4555543 56666654 45544
No 48
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.90 E-value=8.3e-23 Score=208.09 Aligned_cols=246 Identities=16% Similarity=0.111 Sum_probs=179.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..++.++..+|++.++++++++.+|+|+++||..|++
T Consensus 76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~ 154 (365)
T 3gwa_A 76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKG 154 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHH
Confidence 4689999999999999999999999999999999887665 677899999999997679999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.+++||++|+|+||....
T Consensus 155 ~i~~g~~~~vLvvg~e~~s~~~~--------------------------------------------------------- 177 (365)
T 3gwa_A 155 LVETGAARCVLLLTADTYSKYLH--------------------------------------------------------- 177 (365)
T ss_dssp HHHTTSCSEEEEEEEECGGGGSC---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEchhhccCC---------------------------------------------------------
Confidence 99999999999999999986210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|. | ...+...+|||+|+||.+.+...
T Consensus 178 -----------------~~-----------d--------------------------r~~~~lfGDGAaA~vl~~~~~~~ 203 (365)
T 3gwa_A 178 -----------------PL-----------D--------------------------KSVRTLFGDGASATAVIAEHGEL 203 (365)
T ss_dssp -----------------TT-----------C--------------------------HHHHTTBCCEEEEEEEEEECSSS
T ss_pred -----------------cc-----------c--------------------------ccccccccceeEEEEEEecCCCC
Confidence 00 0 00011258999999998754210
Q ss_pred hcCCCceEEEEEEEEe----------c-cCCCC-------------------CC-cc----------HHHHHHHHHHHcC
Q 012506 311 RKGLPILGVFRTFAAV----------G-VDPAI-------------------MG-VG----------PAVAIPAAVKSAG 349 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~----------~-~~p~~-------------------~~-~~----------~~~Ai~~aL~~AG 349 (462)
..++......... + ..|.. +- .+ ...+++++|+++|
T Consensus 204 ---~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~g 280 (365)
T 3gwa_A 204 ---ERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAG 280 (365)
T ss_dssp ---CSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0122111111000 0 01100 00 01 1357789999999
Q ss_pred CCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccc
Q 012506 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTG 429 (462)
Q Consensus 350 l~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G 429 (462)
++++|||+|-+|+++......+.+.||++++++..+ .--+||..+|+-...+.+++.+-+-+.| ++.|... .|.|
T Consensus 281 l~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~g~~~~G--d~vll~~-fG~G 355 (365)
T 3gwa_A 281 EPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRANGTLARG--MRLMLLG-FGVG 355 (365)
T ss_dssp CCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETT
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Eehh
Confidence 999999999999999999999999999999987654 3348999988866666555544222223 5555544 5667
Q ss_pred eeEEEEE
Q 012506 430 MGAAAVF 436 (462)
Q Consensus 430 ~g~A~v~ 436 (462)
+..+.++
T Consensus 356 ~t~~~~l 362 (365)
T 3gwa_A 356 YSWAGCL 362 (365)
T ss_dssp TEEEEEE
T ss_pred heeEEEE
Confidence 6664433
No 49
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.90 E-value=8.1e-24 Score=216.01 Aligned_cols=246 Identities=15% Similarity=0.098 Sum_probs=178.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.+++++..+.. .+..+..++..+|++..+++++++ .+|+|+++||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999887532 567889999999996457999997 8999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.++++||+|+|.++...+.+ -.+
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~~~---------------------------------~dr-------------------- 197 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFSNT---------------------------------DGG-------------------- 197 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCCCS---------------------------------SSH--------------------
T ss_pred HHcCCCCEEEEEEEEecchhhcCC---------------------------------CCH--------------------
Confidence 999999999999999987521100 000
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+ +..++...+|||+|+||.+.+.+++
T Consensus 198 ---------------------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~~~~ 223 (374)
T 2h84_A 198 ---------------------------------------D---------------QMVASSIFADGSAAYIIGCNPRIEE 223 (374)
T ss_dssp ---------------------------------------H---------------HHHHHHHBCCEEEEEEEESSCCTTC
T ss_pred ---------------------------------------H---------------HHhhhhhhccCcEEEEEecCCCccc
Confidence 0 0000112589999999998765432
Q ss_pred cCCCceEEEEEEEEeccC-----------CCC----CC--------ccHHHHHHHHHHHcC------CCCCCccEEEecC
Q 012506 312 KGLPILGVFRTFAAVGVD-----------PAI----MG--------VGPAVAIPAAVKSAG------LQLDDIDLFEINE 362 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~-----------p~~----~~--------~~~~~Ai~~aL~~AG------l~~~DID~~eihd 362 (462)
.+ ++ ++.+++..... ++- ++ .....+++++|+++| ++++|||+| +|+
T Consensus 224 ~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~ 299 (374)
T 2h84_A 224 TP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHT 299 (374)
T ss_dssp CC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECC
T ss_pred CC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECC
Confidence 22 23 56665432110 000 00 123468889999999 999999999 999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 363 AFASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++..+...+.+.||++++++.++ --.-.+||+..++-...+.+++.+-+ .| ++.+.. +.|+|+.++.++
T Consensus 300 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~G--d~vll~-~~G~G~t~~~~l 369 (374)
T 2h84_A 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LP--TYSISL-AFGPGLAFEGCF 369 (374)
T ss_dssp CCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CC--SEEEEE-EEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CC--CeEEEE-Eeccchhhhhhh
Confidence 99999888999999999987632 11234788888886666666654422 23 555554 467777775533
No 50
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.90 E-value=2.4e-22 Score=204.23 Aligned_cols=248 Identities=17% Similarity=0.170 Sum_probs=182.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 69 ~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~ 146 (359)
T 3h78_A 69 EPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMAR 146 (359)
T ss_dssp CTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHH
Confidence 35789999999999999999999999999999999887665 677899999999996 7899999999999999999999
Q ss_pred HHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229 (462)
Q Consensus 150 ~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~ 229 (462)
.+|++|.++++|++|+|.||....
T Consensus 147 ~~i~sG~~~~vLvvg~e~~S~~~~-------------------------------------------------------- 170 (359)
T 3h78_A 147 GQILAGLARHVLVVCGEVLSKRMD-------------------------------------------------------- 170 (359)
T ss_dssp HHHHTTSCSEEEEEEEEECGGGCC--------------------------------------------------------
T ss_pred HHHHCCCcCEEEEEEEchhcccCC--------------------------------------------------------
Confidence 999999999999999999976210
Q ss_pred HcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHH
Q 012506 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 309 (462)
Q Consensus 230 ~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A 309 (462)
+. |+ ....+...+|||+|+||.+.+.
T Consensus 171 ------------------~~-----------d~------------------------~~~t~~lfGDGAaA~vl~~~~~- 196 (359)
T 3h78_A 171 ------------------CS-----------DR------------------------GRNLSILLGDGAGAVVVSAGES- 196 (359)
T ss_dssp ------------------CS-----------TT------------------------THHHHTTBCEEEEEEEEECCSC-
T ss_pred ------------------cc-----------cc------------------------cccccceecceeEEEEEEecCC-
Confidence 00 00 0001122599999999987542
Q ss_pred HhcCCCceEEEEEEEEec-----cC-------C--------C---CCC-cc----------HHHHHHHHHHHcCCCCCCc
Q 012506 310 MRKGLPILGVFRTFAAVG-----VD-------P--------A---IMG-VG----------PAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 310 ~~~g~~~~~~i~g~~~~~-----~~-------p--------~---~~~-~~----------~~~Ai~~aL~~AGl~~~DI 355 (462)
.+..++.......... .+ | . .+. .+ ...+++++|+++|++++||
T Consensus 197 --~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~di 274 (359)
T 3h78_A 197 --LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDI 274 (359)
T ss_dssp --SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred --CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 0111221111110000 01 1 0 000 01 1357789999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-E
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-A 434 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~ 434 (462)
|+|-+|+++..+...+.+.||++++++..+ .--+||...|+-...+.+++.++ +.+ ++.|... .|.|+.++ +
T Consensus 275 d~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~l--~~G--d~vll~~-fG~G~t~~~~ 347 (359)
T 3h78_A 275 DHVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPDI--QPG--QRVLVLT-YGSGATWGAA 347 (359)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGGS--CTT--CEEEEEE-EETTTEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHhC--CCC--CEEEEEE-Echhhhheee
Confidence 999999999999999999999999987765 44589999999877777777662 223 4555543 56676664 4
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+-
T Consensus 348 ll~~ 351 (359)
T 3h78_A 348 LYRK 351 (359)
T ss_dssp EEEC
T ss_pred eEEe
Confidence 5554
No 51
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.89 E-value=8.4e-24 Score=217.48 Aligned_cols=252 Identities=17% Similarity=0.183 Sum_probs=182.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.+++++..+. . .+..+..++..+|++..++.+++ +.+|+|+++||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF-I-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 577899999999999999999999999999998773 3 56788999999999755778998 99999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+|++||+|+|.++.... + +..+..
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~~-~--------------------------------~~~r~~------------------ 217 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNAV-F--------------------------------ADDIND------------------ 217 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGCC-C--------------------------------CSSHHH------------------
T ss_pred HHcCCCCEEEEEEEEeccccCC-C--------------------------------CCCHHH------------------
Confidence 9999999999999999875210 0 000000
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
...+...+|||+|+||.+.+.+..
T Consensus 218 --------------------------------------------------------~~~~~lfGDGA~A~vL~~~~~~~~ 241 (393)
T 1ted_A 218 --------------------------------------------------------VVIHSLFGDGCAALVIGASQVQEK 241 (393)
T ss_dssp --------------------------------------------------------HHHHHHBCEEEEEEEEEEECTTSC
T ss_pred --------------------------------------------------------hhhhhhhcCccEEEEEecCCCccc
Confidence 000112589999999987654321
Q ss_pred cCCCceEEEEEEEEec-cCC-CC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 312 KGLPILGVFRTFAAVG-VDP-AI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~-~~p-~~-------------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
.+ ..+.++.+++... .+. .. .+ .....+++++|+++|++++|||+|.+|+++..+.
T Consensus 242 ~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~ 320 (393)
T 1ted_A 242 LE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 320 (393)
T ss_dssp CC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHH
Confidence 22 2445677764431 111 00 11 1234678999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHh-cCCCCcEEEEEeecccceeEEE-EEE
Q 012506 369 VYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKR-RGRDCRFGVISMCIGTGMGAAA-VFE 437 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~-~~~~~~~gl~~~~~G~G~g~A~-v~~ 437 (462)
..+.+.||++++++.++ --.-.+||+.+++-...+.+++.+-+- +.+ ++.|.. ..|+|+..+. +|+
T Consensus 321 d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~G--d~vll~-~~G~G~t~~~~~l~ 389 (393)
T 1ted_A 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAI--STGVAF-AFGPGVTVEGMLFD 389 (393)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSS--EEEEEE-EEETTTEEEEEEEE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCC--CeEEEE-Eeccchhhhhhhee
Confidence 88899999999987532 112348898888876666666544221 123 555554 3677777654 443
No 52
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.88 E-value=2.8e-22 Score=234.22 Aligned_cols=278 Identities=18% Similarity=0.210 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHHcCC-Cccc----cC----cEEEEeccCCCC-----------------------ccccHHHHHHH-H
Q 012506 76 DDLLAPVLKAVIEKTNV-DPSE----VG----DIVVGTVLAPGS-----------------------QRASECRMAAF-Y 122 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl-~~~~----Id----~vivG~~~~~~~-----------------------~~~~~a~~~a~-~ 122 (462)
..|+.+++.+||+++|+ +|.+ |+ ++++|+..+... .....+.+++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 45889999999999999 4766 44 466665543200 01123456666 4
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+ ..+..|+.++.
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~-----------------~~f~~m~als~- 1351 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGS-----------------FEFGNMKATSN- 1351 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------HHHHHTTCBCC-
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH-----------------HHHHHhhhhcc-
Confidence 899 6799999999999999999999999999999999999999754110 00011111110
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
..++++ .| .++++.+ || |+.
T Consensus 1352 ----------~~~e~~------------~g-------------------------~~p~~~~------------RP-fd~ 1371 (1887)
T 2uv8_A 1352 ----------TLEEFE------------HG-------------------------RTPAEMS------------RP-ATT 1371 (1887)
T ss_dssp ----------HHHHHH------------TT-------------------------CCGGGSC------------CT-TBT
T ss_pred ----------chhhhc------------cc-------------------------CCCccCc------------CC-Ccc
Confidence 000000 00 1123333 33 432
Q ss_pred --CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC------Cc-------------------
Q 012506 283 --DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GV------------------- 335 (462)
Q Consensus 283 --~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~------~~------------------- 335 (462)
+|++ .+||++++||++.+.|+++|.+|+++|.|++.+....... |+
T Consensus 1372 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld 1444 (1887)
T 2uv8_A 1372 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1444 (1887)
T ss_dssp TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGC
T ss_pred cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccc
Confidence 3443 7999999999999999999999999999999876432111 00
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012506 336 ------------------------------------------------------------------------GPAVAIPA 343 (462)
Q Consensus 336 ------------------------------------------------------------------------~~~~Ai~~ 343 (462)
+...++++
T Consensus 1445 ~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ 1524 (1887)
T 2uv8_A 1445 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1524 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHH
Confidence 00368999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHH----HHHHH-H---HcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQ----FVYCR-N---KLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~----~~~~~-e---~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~ 414 (462)
+|+++||+++||||+|.|++++.. +...+ + .+|-.. .++.+..-+..+|||.||+|+.+++.++.+|+...
T Consensus 1525 ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~ 1604 (1887)
T 2uv8_A 1525 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGI 1604 (1887)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCC
Confidence 999999999999999999999953 22222 2 234432 23333222333799999999999999999998741
Q ss_pred -----------------------------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -----------------------------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -----------------------------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.+.++++++..+.||.++.+|++...
T Consensus 1605 iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1605 IPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp ECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred cCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 02477888887777888888888643
No 53
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.88 E-value=2.2e-21 Score=196.16 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=179.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++++..+|+.+|+++||+++|+++++||.|++++.+++.. .+..+..++..+|++ +.++++++.+|+++++||..|.+
T Consensus 58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~ 135 (350)
T 4ewp_A 58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADA 135 (350)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhh
Confidence 6789999999999999999999999999999999988765 678899999999996 67899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+||+++|.+|...
T Consensus 136 ~i~~g~~~~~Lvv~~E~~s~~~---------------------------------------------------------- 157 (350)
T 4ewp_A 136 LVRSGTARHVLVVGVERLSDVV---------------------------------------------------------- 157 (350)
T ss_dssp HHHTTSCSEEEEEEEEEGGGGC----------------------------------------------------------
T ss_pred hhhCCCccceeEeeeeeceecc----------------------------------------------------------
Confidence 9999999999999999987511
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
||.. ...+...+|||+|+||...+.
T Consensus 158 ----------------d~~~-------------------------------------~~~~~lfgDGA~A~vl~~~~~-- 182 (350)
T 4ewp_A 158 ----------------DPTD-------------------------------------RSISFLLGDGAGAVIVAASDE-- 182 (350)
T ss_dssp ----------------CTTC-------------------------------------TTTGGGBCEEEEEEEEEEESS--
T ss_pred ----------------cccc-------------------------------------cccccccccchheeeeecccC--
Confidence 1100 000112589999999976432
Q ss_pred hcCCCceEEEEEEEEec-----------------------cCCC------------C-CC---------ccHHHHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVG-----------------------VDPA------------I-MG---------VGPAVAIPAAV 345 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~-----------------------~~p~------------~-~~---------~~~~~Ai~~aL 345 (462)
.+. .....+.-... .+.. . |. .....+++++|
T Consensus 183 -~~~--~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L 259 (350)
T 4ewp_A 183 -PGI--SPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREAL 259 (350)
T ss_dssp -CCB--CCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHH
T ss_pred -CCc--cceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHH
Confidence 111 11111110000 0000 0 00 01235788999
Q ss_pred HHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q 012506 346 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 425 (462)
Q Consensus 346 ~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~ 425 (462)
+++|++++|||+|-+|+++..+...+.+.||++++++-+. -.--+||...+|-...+.+++.+-+-+.| ++.+...
T Consensus 260 ~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g~~~~G--d~vll~~- 335 (350)
T 4ewp_A 260 DAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEENPELSG--GLALQIG- 335 (350)
T ss_dssp HHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHCGGGTT--SEEEEEE-
T ss_pred HhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhCCCCCc--CEEEEEE-
Confidence 9999999999999999999999999999999998875431 12348999999977777777765444444 5655543
Q ss_pred cccceeEEEEEE
Q 012506 426 IGTGMGAAAVFE 437 (462)
Q Consensus 426 ~G~G~g~A~v~~ 437 (462)
.|.|+.++.++.
T Consensus 336 fG~G~t~~~~vl 347 (350)
T 4ewp_A 336 FGAGLVYGAQVV 347 (350)
T ss_dssp EETTTEEEEEEE
T ss_pred EchhhEeEEEEE
Confidence 577777655443
No 54
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.87 E-value=1.6e-21 Score=227.53 Aligned_cols=276 Identities=17% Similarity=0.207 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHcCCC-ccc----cC----cEEEEeccCCCC--------------------c---cccHHHHHHH-H
Q 012506 76 DDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGS--------------------Q---RASECRMAAF-Y 122 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~-~~~----Id----~vivG~~~~~~~--------------------~---~~~~a~~~a~-~ 122 (462)
..|+.+++.+||+++|++ |.+ |+ ++++|+..+... + ....+.+++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 457889999999999998 766 44 577776654310 0 0123456666 4
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+ ..+..|+.
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~-----------------~~f~~m~a---- 1323 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS-----------------YEFANMGA---- 1323 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH-----------------HHHHHHTC----
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH-----------------HHHHHhhh----
Confidence 898 6799999999999999999999999999999999999999754110 00011111
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
.+. ..++++ .| .++++.+| | |+.
T Consensus 1324 ------ls~-~~de~a------------~g-------------------------~~p~~~~R------------P-fd~ 1346 (1878)
T 2uv9_A 1324 ------TSN-AKEEFA------------RG-------------------------REPGEMSR------------P-TST 1346 (1878)
T ss_dssp ------BCC-HHHHHT------------TT-------------------------CCTTSSCC------------S-SBT
T ss_pred ------hcc-chhhhh------------cC-------------------------CCcccCcC------------C-Ccc
Confidence 110 011111 00 11233333 3 432
Q ss_pred --CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC----CccH-------------------
Q 012506 283 --DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM----GVGP------------------- 337 (462)
Q Consensus 283 --~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~----~~~~------------------- 337 (462)
+|+ ..+||++++||++.+.|+++|.+|+++|.+++.+....... +.+.
T Consensus 1347 ~r~Gf-------v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~ 1419 (1878)
T 2uv9_A 1347 TRNGF-------MESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIK 1419 (1878)
T ss_dssp TCCCB-------CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHH
T ss_pred CCCCC-------cccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchH
Confidence 344 37999999999999999999999999999999875322110 1111
Q ss_pred --------------------------------------------------------------------------------
Q 012506 338 -------------------------------------------------------------------------------- 337 (462)
Q Consensus 338 -------------------------------------------------------------------------------- 337 (462)
T Consensus 1420 ~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~ 1499 (1878)
T 2uv9_A 1420 YRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSR 1499 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTT
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChH
Confidence
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHH----HHcCCCCC---CCCCCCCccccCCccchHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCR----NKLGLDPE---KINVNGGALAIGHPLGTTGARCVATL 406 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~----e~LGl~~~---~vn~~GG~~a~Ghp~gatG~~~~~~~ 406 (462)
..+++++|+++||+++|||++|.|++++.. +...+ ..+|-... +++..++. +|||.||+|+.+++.+
T Consensus 1500 ~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~Ksl--iGH~~gAAGa~~li~~ 1577 (1878)
T 2uv9_A 1500 IAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYL--TGHPKGAAGAWMLNGC 1577 (1878)
T ss_dssp SCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHH--HCBCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccc--cCChHhHhhHHHHHHH
Confidence 168999999999999999999999999953 22222 22343321 34444444 7999999999999999
Q ss_pred HHHHHhcC-----------------------------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 407 LHEMKRRG-----------------------------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 407 ~~qL~~~~-----------------------------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.+|+... .+.++++++..+.||.++.+|++...
T Consensus 1578 l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1578 LQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp HHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 99999741 02477888887778888888888653
No 55
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.87 E-value=1.6e-21 Score=198.04 Aligned_cols=256 Identities=18% Similarity=0.129 Sum_probs=176.4
Q ss_pred eecccccCCCCCCCCC--CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec
Q 012506 58 YRTALCKSKRGGFKDT--YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~--~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
.+|.+.+. +-...+. ++.+|+.+|+++||+++|+++++||.|++++......+...++..++..+|++ ++++++|+
T Consensus 36 ~~tGi~~r-~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~ 113 (357)
T 3s3l_A 36 KLRGIESV-TVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA 113 (357)
T ss_dssp HHHCCCEE-ECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE
T ss_pred HHcCceEE-EecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc
Confidence 45555442 2222344 89999999999999999999999999999998421211336788999999995 79999999
Q ss_pred CCCchHHHHHHHHHHHHHccCCC--EEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 136 RQCSSGLQAVADVAAAIKAGFYD--IGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 136 ~~CsSgl~Ai~~Aa~~I~sG~~d--~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
.+|+|+++||..|+.+|++|.++ +|||+|+|+||.....
T Consensus 114 ~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~--------------------------------------- 154 (357)
T 3s3l_A 114 QRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRID--------------------------------------- 154 (357)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTTCC---------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccccc---------------------------------------
Confidence 99999999999999999999999 9999999999841000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~ 293 (462)
++ ++ ..+..
T Consensus 155 ---------------------------------~~------------~~--------------------------~~~~l 163 (357)
T 3s3l_A 155 ---------------------------------RW------------NS--------------------------VDVTM 163 (357)
T ss_dssp ---------------------------------TT------------TS--------------------------SSSCC
T ss_pred ---------------------------------cc------------cc--------------------------cCCcc
Confidence 00 00 01223
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEe--cc------------CCC-----CCC-------------------c
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV--GV------------DPA-----IMG-------------------V 335 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~--~~------------~p~-----~~~-------------------~ 335 (462)
.+|||+|+||.+.+. . ..+.++... +. +|. .+. .
T Consensus 164 fGDGA~A~vl~~~~~-------~-~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 235 (357)
T 3s3l_A 164 YGDGAAALVLSTRDG-------F-ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHR 235 (357)
T ss_dssp BCCEEEEEEEESSCC-------S-EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHH
T ss_pred cccccEEEEEecCCC-------C-CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHH
Confidence 699999999987531 1 123332221 10 010 000 0
Q ss_pred ---cHHHHHHHHHHHcCCCCCCccEEEe-cCCCHHHHHHHHHHcCCCCCCCCCCCCcc-ccCCccchHHHHHHHHHHHHH
Q 012506 336 ---GPAVAIPAAVKSAGLQLDDIDLFEI-NEAFASQFVYCRNKLGLDPEKINVNGGAL-AIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 336 ---~~~~Ai~~aL~~AGl~~~DID~~ei-hdafa~~~~~~~e~LGl~~~~vn~~GG~~-a~Ghp~gatG~~~~~~~~~qL 410 (462)
....+++++|+++|++++|||+|-+ |+++.. ...+.++||++++++..+ .. -+||...++-...+.+++.+-
T Consensus 236 ~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~g 312 (357)
T 3s3l_A 236 YIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVENA 312 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHcC
Confidence 1234778999999999999999996 999988 777889999999987642 11 268888887666666655432
Q ss_pred HhcCCCCcEEEEEeecccceeE-EEEEEec
Q 012506 411 KRRGRDCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 411 ~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
+-+.| ++.|... .|.|+.+ +++|+-.
T Consensus 313 ~l~~G--d~vll~~-fG~G~t~~a~ll~~~ 339 (357)
T 3s3l_A 313 LVQPG--DRVLLFG-GGAGYTCTAAVVEIL 339 (357)
T ss_dssp CCCTT--CEEEEEC-CBTTTEEEEEEEEEC
T ss_pred CCCCC--CEEEEEE-EchhhhheeeeEEec
Confidence 22223 5555554 5667666 4455543
No 56
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6e-23 Score=232.89 Aligned_cols=277 Identities=18% Similarity=0.196 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-ccc----cC----cEEEEeccCCCCc-----------------------cccHHHHHHH-
Q 012506 75 PDDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGSQ-----------------------RASECRMAAF- 121 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~-~~~----Id----~vivG~~~~~~~~-----------------------~~~~a~~~a~- 121 (462)
...|+.+++.+||+++|++ |.+ |+ ++++|+..+.... ....+.+++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 3568999999999999997 665 33 5566654443110 0113445666
Q ss_pred HcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 122 ~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
.+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+.. +..|+.++.
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~-----------------Fa~mgaLS~ 1152 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE-----------------FGNMKATSN 1152 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTT-----------------TTTTSCSCC
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHH-----------------HHhcccccc
Confidence 6888 579999999999999999999999999999999999999987643210 000110000
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+.+ .|. . -.++++.+ || |+
T Consensus 1153 --------~~~--------------------e~a---------------~-----G~~Pd~~c------------RP-Fd 1171 (1688)
T 2pff_A 1153 --------TLE--------------------EFE---------------H-----GRTPAEMS------------RP-AT 1171 (1688)
T ss_dssp --------TTT--------------------TTT---------------S-----SCCSSSSC------------CS-SS
T ss_pred --------Chh--------------------hhh---------------c-----CCChhhcc------------Cc-Cc
Confidence 000 000 0 01123333 33 43
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-----C-CCc------------------
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-----I-MGV------------------ 335 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-----~-~~~------------------ 335 (462)
. +|+ ..+||++++||++.+.|+++|.+|+++|.|++.+..... . .+.
T Consensus 1172 ~~rdGf-------v~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~l 1244 (1688)
T 2pff_A 1172 TTRNGF-------MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNL 1244 (1688)
T ss_dssp SSCCCC-------CCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCS
T ss_pred cCCCCC-------ccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCccc
Confidence 2 343 379999999999999999999999999999887653211 0 111
Q ss_pred -------------------------------------------------------------------------cHHHHHH
Q 012506 336 -------------------------------------------------------------------------GPAVAIP 342 (462)
Q Consensus 336 -------------------------------------------------------------------------~~~~Ai~ 342 (462)
+...+++
T Consensus 1245 d~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr 1324 (1688)
T 2pff_A 1245 NMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLR 1324 (1688)
T ss_dssp CTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHH
Confidence 0035789
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHH----HHHH-HHHc---CCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQ----FVYC-RNKL---GLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~----~~~~-~e~L---Gl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
++|+++||+++|||++|.|++++.. +... .+.+ |-.. -+++..++. +|||.||+|+.+++.++.+|+
T Consensus 1325 ~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~Ksl--iGHp~GAAGa~~Lik~llaL~ 1402 (1688)
T 2pff_A 1325 GALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFL--TGHPKGAAGAWMMNGALQILN 1402 (1688)
T ss_dssp HHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTT--TCCCSSTHHHHHHHHHHHHST
T ss_pred HHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhh--hcchHHHhhHHHHHHHHHHHH
Confidence 9999999999999999999988832 2111 1223 3322 234455555 799999999999999999999
Q ss_pred hcCC-----------------------------CCcEEEEEeecccceeEEEEEEecc
Q 012506 412 RRGR-----------------------------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 412 ~~~~-----------------------------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...- +.+++++++.+.||.++.+|++..+
T Consensus 1403 ~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1403 SGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp TCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred cCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 7520 1356777776667788888887654
No 57
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.87 E-value=1.1e-20 Score=194.12 Aligned_cols=238 Identities=12% Similarity=0.055 Sum_probs=170.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+ ++++++++.+|+|+++||..|+++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999887665 67789999999999 47999999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.+++|||+|+|.||...
T Consensus 193 ~g~~~~vLvvg~E~~S~~~------------------------------------------------------------- 211 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHL------------------------------------------------------------- 211 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGC-------------------------------------------------------------
T ss_pred CCCCCEEEEEeehhcCCcC-------------------------------------------------------------
Confidence 9999999999999997621
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|+. | + ..+...+|||+|+||.+.+...
T Consensus 212 -------------d~~-----------d--------------------r------~t~~lFGDGA~A~vl~~~~~~~--- 238 (392)
T 3led_A 212 -------------NFR-----------D--------------------R------DSHFIFGDVATAAIVERADDAQ--- 238 (392)
T ss_dssp -------------CTT-----------C--------------------T------TTTTTBCEEEEEEEEEEGGGCC---
T ss_pred -------------CcC-----------c--------------------c------cCCcccccccEEEEEEecCCCC---
Confidence 000 0 0 0122369999999998765210
Q ss_pred CCceEEEEEEEEecc---------------CCCCCC--------cc----------HHHHHHHHHHHcCCCCCCccEEEe
Q 012506 314 LPILGVFRTFAAVGV---------------DPAIMG--------VG----------PAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~---------------~p~~~~--------~~----------~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+...+.+...... .++.+. .+ ...+++++|+++|++++|||+|-+
T Consensus 239 --~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~ 316 (392)
T 3led_A 239 --GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWL 316 (392)
T ss_dssp --SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred --CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEE
Confidence 1113333222110 011000 01 124678999999999999999999
Q ss_pred cCCCHHHHHHHHHHc-CC--CCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEE
Q 012506 361 NEAFASQFVYCRNKL-GL--DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVF 436 (462)
Q Consensus 361 hdafa~~~~~~~e~L-Gl--~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~ 436 (462)
|+++..+.....++| |+ +.+++..+ .--+||...||-...+.++ .++.+..++.|... .|.|+.++ ++|
T Consensus 317 Hqan~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsipl~L~~~----~~~~~~Gd~vll~g-fG~G~t~~~~ll 389 (392)
T 3led_A 317 HQANINMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSIIAFHKH----QDDMAQGDLGLICS-FGAGYSAGTVFV 389 (392)
T ss_dssp CSSCHHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHHHHHHHC----CTTCCTTCEEEEEE-EETTTEEEEEEE
T ss_pred cCCCHHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHHHHHHHH----hCCCCCCCEEEEEE-EChhhEeEEEEE
Confidence 999999888888886 75 45565443 3458999888865555443 33322125666654 56676664 454
Q ss_pred E
Q 012506 437 E 437 (462)
Q Consensus 437 ~ 437 (462)
+
T Consensus 390 ~ 390 (392)
T 3led_A 390 Q 390 (392)
T ss_dssp E
T ss_pred E
Confidence 4
No 58
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.86 E-value=1.2e-20 Score=214.73 Aligned_cols=256 Identities=13% Similarity=0.059 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC-cceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-VPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~-~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++.. .++++++.+|+|+++||..|+++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VE-MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CC-SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CC-CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 456999999999999999999999999999544 33 57789999999999532 4689999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.++++||+|+|.++......
T Consensus 767 sG~~~~vLvvg~e~~~~~~~~~---------------------------------------------------------- 788 (979)
T 3tsy_A 767 NNAGARVLVVCSEITVVTFRGP---------------------------------------------------------- 788 (979)
T ss_dssp TSTTCEEEEEEEECTTTTCCCC----------------------------------------------------------
T ss_pred hCCCCEEEEEEEEecchheeCC----------------------------------------------------------
Confidence 9999999999999975421100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
...+++++ .+++..+|||+|+||.+.+.+..++
T Consensus 789 --------------------------------~~~~~~~~---------------~~~~lfGDGA~A~vL~~~~~~~~~~ 821 (979)
T 3tsy_A 789 --------------------------------SEDALDSL---------------VGQALFGDGSAAVIVGSDPDISIER 821 (979)
T ss_dssp --------------------------------CSSCHHHH---------------HHHHHBCCEEEEEEEESSCCSSSCC
T ss_pred --------------------------------CccCHHHH---------------hhhhhccCceEEEEEecCCCccccC
Confidence 00011111 1223369999999999877655455
Q ss_pred CCceEEEEEEEEeccCCCCC-----Ccc----------------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH
Q 012506 314 LPILGVFRTFAAVGVDPAIM-----GVG----------------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~p~~~-----~~~----------------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~ 372 (462)
........++.........+ ..+ ...+++++|+++|++++|||+|.+|+++..+...+.
T Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~ 901 (979)
T 3tsy_A 822 PLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVE 901 (979)
T ss_dssp CCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHH
T ss_pred cceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHH
Confidence 44444444444322111100 011 357899999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-----CCcEEEEEeecccceeEEEEEEe
Q 012506 373 NKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 373 e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.||++++++.++=- .--+||+..||-...+.+++.+++.... +...++... .|+|+.++.++.+
T Consensus 902 ~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~-~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 902 AKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFG-FGPGLTIETVVLH 972 (979)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-ECGGGEEEEEEEE
T ss_pred HHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEE-eCCchHHHHHHHH
Confidence 999999998765311 1238999999998888888877654321 113456654 6777777554433
No 59
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.85 E-value=6.2e-20 Score=183.65 Aligned_cols=240 Identities=19% Similarity=0.163 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHc
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~s 154 (462)
+.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+.+|++
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHC
Confidence 899999999999999999999999999999887665 678899999999997 499999999999999999999999999
Q ss_pred cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q 012506 155 GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 234 (462)
Q Consensus 155 G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f 234 (462)
|.++++|++|+|.+|...
T Consensus 130 g~~~~vLvvg~e~~s~~~-------------------------------------------------------------- 147 (321)
T 3il6_A 130 GRYQTGLVIGGETFSKML-------------------------------------------------------------- 147 (321)
T ss_dssp SSCCCEEEEEEECGGGGS--------------------------------------------------------------
T ss_pred CCCCEEEEEEEccccccC--------------------------------------------------------------
Confidence 999999999999997610
Q ss_pred ccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCC
Q 012506 235 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 314 (462)
Q Consensus 235 ~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~ 314 (462)
|+. | | ..+...+|||+|+||.+.+. .
T Consensus 148 ------------~~~-----------d---r-----------------------~~~~lfGDGA~A~vl~~~~~-----~ 173 (321)
T 3il6_A 148 ------------DWT-----------D---R-----------------------STAVLFGDGAAGVLIEAAET-----P 173 (321)
T ss_dssp ------------CTT-----------C---T-----------------------TTGGGBCCEEEEEEEEEESS-----C
T ss_pred ------------Ccc-----------c---c-----------------------ccceeeccccEEEEEEEcCC-----C
Confidence 000 0 0 01122699999999987542 1
Q ss_pred CceEEEEEE-EEe------c----cCCC---------CCCc-c---H---HHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 315 PILGVFRTF-AAV------G----VDPA---------IMGV-G---P---AVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 315 ~~~~~i~g~-~~~------~----~~p~---------~~~~-~---~---~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.++...... +.. . ..|. .+.. + + ...++++++++ +.++|||+|-+|+.+...
T Consensus 174 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~Hq~~~~i 252 (321)
T 3il6_A 174 HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLLHQANVRI 252 (321)
T ss_dssp CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEECCSCHHH
T ss_pred CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEEcCCCHHH
Confidence 122211111 100 0 0010 0000 1 1 12334444433 348999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 368 FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.|+.++.|... .|.|+.++.++
T Consensus 253 ~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~-fG~G~t~~~~~ 318 (321)
T 3il6_A 253 IDKIARKTKISREKFLTN--MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTG-FGGGLTWGSLL 318 (321)
T ss_dssp HHHHHHHHTCCGGGBCCC--GGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEE-EETTTEEEEEE
T ss_pred HHHHHHHcCcCHHHhhhh--HhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEE-EehhheeEEEE
Confidence 999999999999987654 4458999988866666665543221111003444443 56676664433
No 60
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.85 E-value=3.6e-20 Score=191.22 Aligned_cols=254 Identities=15% Similarity=0.103 Sum_probs=181.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV-D-MPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDL 190 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 2 5678899999999975456 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|.....
T Consensus 191 i~~g~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 213 (406)
T 2d3m_A 191 AENNRGARVLVVCAELTIMMLRA--------------------------------------------------------- 213 (406)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEEecchheeC---------------------------------------------------------
Confidence 99999999999999998762110
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
|. | ...++ ...+...+|||+|+||.+.+..
T Consensus 214 ----------------~~-----------d------~~~~~---------------~~~~~lfGDGAaA~vL~~~~~~-- 243 (406)
T 2d3m_A 214 ----------------PN-----------E------THLDN---------------AIGISLFGDGAAALIIGSDPII-- 243 (406)
T ss_dssp ----------------CC-----------S------TTHHH---------------HHHHTTBCCEEEEEEEESSCCT--
T ss_pred ----------------Cc-----------c------cchhh---------------hhccceeccceEEEEEecCCCC--
Confidence 00 0 00000 0011226999999999875431
Q ss_pred cC-CCceEEEEEEEEeccCCC--C-------------CC--------ccHHHHHHHHHHHcCCCCCCccE----EEecCC
Q 012506 312 KG-LPILGVFRTFAAVGVDPA--I-------------MG--------VGPAVAIPAAVKSAGLQLDDIDL----FEINEA 363 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p~--~-------------~~--------~~~~~Ai~~aL~~AGl~~~DID~----~eihda 363 (462)
+ ..+..++.+.+....+.. . ++ .....+++++|+++|++++ ||+ |.+|++
T Consensus 244 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~ 321 (406)
T 2d3m_A 244 -GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG 321 (406)
T ss_dssp -TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS
T ss_pred -ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC
Confidence 2 122235555554311110 0 11 0124688899999999999 999 999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC-----CCCcEEEEEeecccceeEE-EEE
Q 012506 364 FASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAA-AVF 436 (462)
Q Consensus 364 fa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-----~~~~~gl~~~~~G~G~g~A-~v~ 436 (462)
+..+...+.+.||++++++..+ --.--+||..+|+....+.+++.+-++.+ .+.++.|... .|.|+.+. ++|
T Consensus 322 ~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~~g~~~G~~~~g~~~d~vll~~-fG~G~t~~~~ll 400 (406)
T 2d3m_A 322 GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLLG-FGPGITVETILL 400 (406)
T ss_dssp CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHhccccCCCccCCCcceEEEEE-eccchhhhhHHh
Confidence 9999888899999999887542 11234999999999999999887754222 0013555543 56666654 455
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
+.
T Consensus 401 ~~ 402 (406)
T 2d3m_A 401 HS 402 (406)
T ss_dssp EE
T ss_pred hh
Confidence 43
No 61
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.83 E-value=1.2e-19 Score=186.08 Aligned_cols=251 Identities=15% Similarity=0.098 Sum_probs=170.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++..++ +++++.+|+|+++||..|+.+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999877 43 6788999999999975443 8999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.++.|||+|+|.+|....
T Consensus 173 ~sg~~~~vLvvg~E~~s~~~~----------------------------------------------------------- 193 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMYFT----------------------------------------------------------- 193 (387)
T ss_dssp HSSTTCEEEEEEEECGGGTCC-----------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchhcc-----------------------------------------------------------
Confidence 999999999999999973110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|.. .+.++ ...+...+|||+|+||.+.+. .
T Consensus 194 --------------~~~d-----------------~~~~~---------------~~~~~lFGDGAaA~vl~~~~~--~- 224 (387)
T 3oit_A 194 --------------GPDE-----------------GCFRT---------------LLVQGLFGDGAAAVIVGADAD--D- 224 (387)
T ss_dssp --------------CCCS-----------------SSCHH---------------HHHHHHBCCEEEEEEEESSCC--S-
T ss_pred --------------Cccc-----------------cchHh---------------hhcccccccceEEEEEecCCC--c-
Confidence 0000 00000 001222699999999987541 1
Q ss_pred CCCceEEEEEEEEeccCC--CC-------------CCc--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCC
Q 012506 313 GLPILGVFRTFAAVGVDP--AI-------------MGV--------GPAVAIPAAVKSA----GLQLDDID--LFEINEA 363 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p--~~-------------~~~--------~~~~Ai~~aL~~A----Gl~~~DID--~~eihda 363 (462)
...+..++.+.+....+. .. +.. ....++.++|+++ |++ ||| +|-+|++
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~ 302 (387)
T 3oit_A 225 VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPG 302 (387)
T ss_dssp SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCC
T ss_pred ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCC
Confidence 112233555443321110 00 000 1134667788888 988 666 9999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCC----CCcEEEEEeecccceeE-EEEEE
Q 012506 364 FASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGR----DCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 364 fa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
+..+...+.++|||+++++..+ --.--+||...||-...+.++..+ +-+.| +.+++|... .|.|+.+ +++|+
T Consensus 303 n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~-fG~G~t~~~~ll~ 380 (387)
T 3oit_A 303 SSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMA-FGPGMTVDAMLLH 380 (387)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEE-EETTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEE-ecccceeeeeeeE
Confidence 9999999999999999987542 112338999999977777766544 11111 014566654 6777776 45665
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
.
T Consensus 381 ~ 381 (387)
T 3oit_A 381 A 381 (387)
T ss_dssp E
T ss_pred e
Confidence 4
No 62
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.83 E-value=3.6e-19 Score=182.93 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=178.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++...+ +++++.+|+|+++||..|+.+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887 43 6788999999999975443 8999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.++.|||+|+|.+|....
T Consensus 179 ~sg~~~~vLvvg~E~~s~~~~----------------------------------------------------------- 199 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLSFR----------------------------------------------------------- 199 (393)
T ss_dssp HHSTTCEEEEEEEECGGGTCC-----------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchhcc-----------------------------------------------------------
Confidence 999999999999999974110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|.. .+.+++ ..+...+|||+|+||...+.. ..
T Consensus 200 --------------~~~d-----------------~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~-~~ 232 (393)
T 3ov2_A 200 --------------GPNE-----------------GDFEAL---------------AGQAGFGDGAGAVVVGADPLE-GI 232 (393)
T ss_dssp --------------CCCT-----------------TCHHHH---------------HHHHHBCCEEEEEEEESSCCT-TT
T ss_pred --------------CCcc-----------------cchhhh---------------cccccccCccEEEEEEecCCC-cc
Confidence 0000 000000 011225899999999875431 11
Q ss_pred CCCceEEEEEEEEeccCCC---------------CCCc--------cHHHHHHHHHHHcCCCC-CCccEEEecCCCHHHH
Q 012506 313 GLPILGVFRTFAAVGVDPA---------------IMGV--------GPAVAIPAAVKSAGLQL-DDIDLFEINEAFASQF 368 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p~---------------~~~~--------~~~~Ai~~aL~~AGl~~-~DID~~eihdafa~~~ 368 (462)
..+.-.+...+....+.. .|.. ....++.++|+++|+++ +|| +|-+|+++..+.
T Consensus 233 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~ 310 (393)
T 3ov2_A 233 -EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAII 310 (393)
T ss_dssp -CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHH
T ss_pred -cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHH
Confidence 112223333322111100 0110 12357889999999997 888 899999999999
Q ss_pred HHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----C-CCcEEEEEeecccceeE-EEEEEec
Q 012506 369 VYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----R-DCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~-~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
..+.+.|||+++++..+ --.--+||...||-...+.+++.+...++ | +.++.|... .|.|+.+ +++|+..
T Consensus 311 ~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~-fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 311 DAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLG-FGPGLSIETVVLRSM 387 (393)
T ss_dssp HHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEE-ECccceeeeeeeEEc
Confidence 99999999999987542 01223899999998777777776521111 1 114556554 6777776 4566543
No 63
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.82 E-value=1.2e-19 Score=185.72 Aligned_cols=256 Identities=17% Similarity=0.133 Sum_probs=173.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++.+ +.. .+..+..++..+|++....++++ +.+|+++++||..|+++|
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~-~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 157 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLC 157 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCC-CCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHH
Confidence 457999999999999999999999999999987 443 67889999999999744448999 799999999999999999
Q ss_pred Hc----cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 012506 153 KA----GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228 (462)
Q Consensus 153 ~s----G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a 228 (462)
++ |.++.|||+|+|.+|.. .+... +. + . .
T Consensus 158 ~a~~~~G~~~~vLvv~~E~~s~~------------~~~~~------------~~-----------~--------~---~- 190 (379)
T 3euo_A 158 LGHTARGKPARILVLALEVSTTM------------VRSEL------------ES-----------I--------D---A- 190 (379)
T ss_dssp HHHHHTTCCCEEEEEEEECCGGG------------HHHHH------------HH-----------H--------H---H-
T ss_pred HhccccCCCCEEEEEEEEeehhh------------hcCcc------------cc-----------c--------c---c-
Confidence 98 99999999999998761 00000 00 0 0 0
Q ss_pred HHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHH
Q 012506 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 308 (462)
Q Consensus 229 ~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~ 308 (462)
+. + ....+...+|||+|+||.+.+.
T Consensus 191 -------------------~~-----------~-------------------------d~~~~~LFGDGAaAvvl~~~~~ 215 (379)
T 3euo_A 191 -------------------LQ-----------E-------------------------TRIGIALFSDCASAVILSNGIG 215 (379)
T ss_dssp -------------------HC-----------C-------------------------CCCHHHHBCCEEEEEEEECCTT
T ss_pred -------------------cH-----------H-------------------------HhhcceeecCccEEEEEecCCC
Confidence 00 0 0011223699999999987542
Q ss_pred HHhcCCCceEEEEEEEEeccC--------------------CCCCC---ccHHHHHHHHHHH-------cCCCCCCccEE
Q 012506 309 AMRKGLPILGVFRTFAAVGVD--------------------PAIMG---VGPAVAIPAAVKS-------AGLQLDDIDLF 358 (462)
Q Consensus 309 A~~~g~~~~~~i~g~~~~~~~--------------------p~~~~---~~~~~Ai~~aL~~-------AGl~~~DID~~ 358 (462)
.. ....+...+.++.....+ ++.+. .....++.++|++ +|++++|||++
T Consensus 216 ~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~ 294 (379)
T 3euo_A 216 EA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA 294 (379)
T ss_dssp CC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE
T ss_pred Cc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHeeEE
Confidence 11 112223345544322110 00000 0123567778886 58999999988
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCcc-ccCCccchHHHHHHHHHHHH----HHhcCCCCcEEEEEeecccceeEE
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGAL-AIGHPLGTTGARCVATLLHE----MKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~-a~Ghp~gatG~~~~~~~~~q----L~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
+|+++..+...+.++|||+++++..+=-.+ -+||...||-...+.+++.+ ++..+...+++|... .|.|+.+.
T Consensus 295 -~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~l~~Gg~~~d~vll~~-fG~G~t~~ 372 (379)
T 3euo_A 295 -MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGINVE 372 (379)
T ss_dssp -ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSHHHHTTCGGGCCCSEEEEEE-EETTTEEE
T ss_pred -eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEEE-ECcccEeE
Confidence 999999999999999999999875421111 36999999877766666653 221111115666654 67777775
Q ss_pred EEE
Q 012506 434 AVF 436 (462)
Q Consensus 434 ~v~ 436 (462)
.++
T Consensus 373 ~~l 375 (379)
T 3euo_A 373 MCM 375 (379)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 64
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.82 E-value=1.3e-18 Score=179.47 Aligned_cols=253 Identities=11% Similarity=0.061 Sum_probs=178.6
Q ss_pred eecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cC
Q 012506 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NR 136 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~ 136 (462)
.+|++.++ +..+. .+..+|+.+|+++||+++|+++++||.|++++.++. . .+..+..++..+|++..++.+++ +.
T Consensus 122 ~rtgi~~R-~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~-~P~~a~~v~~~LGl~~~~~~~~v~~~ 197 (413)
T 3v7i_A 122 ASQTVQER-TAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-A-LPGLDVALANRLPLRGDTMLLPATQW 197 (413)
T ss_dssp CCCCHHHH-HHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-C-SSCHHHHHHHHTTCCTTCEEEEESSC
T ss_pred cCCCHHHh-Ccccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-C-cCHHHHHHHHHhCCCCCceEEEeeCC
Confidence 45666542 22222 368899999999999999999999999999998874 3 67889999999999766888999 99
Q ss_pred CCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHH
Q 012506 137 QCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 216 (462)
Q Consensus 137 ~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~ 216 (462)
+|+|+++||..|+.+|++|.+++|||+|+|.||... .
T Consensus 198 ~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~------------------------------------------ 234 (413)
T 3v7i_A 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-Q------------------------------------------ 234 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-C------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-C------------------------------------------
Confidence 999999999999999999999999999999998621 0
Q ss_pred HHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCC
Q 012506 217 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 296 (462)
Q Consensus 217 ~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sD 296 (462)
|. | .+.+++ ..+...+|
T Consensus 235 -------------------------------~~-----------d------~~~~~l---------------v~~~LFGD 251 (413)
T 3v7i_A 235 -------------------------------PA-----------D------DTLESL---------------IVRLLFAD 251 (413)
T ss_dssp -------------------------------SS-----------C------CSTTHH---------------HHHHHBCC
T ss_pred -------------------------------cc-----------c------cchhhh---------------hcceeecc
Confidence 00 0 000000 01122599
Q ss_pred cceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----------------CC-c------cHHHHHHHHHH------H
Q 012506 297 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----------------MG-V------GPAVAIPAAVK------S 347 (462)
Q Consensus 297 GAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----------------~~-~------~~~~Ai~~aL~------~ 347 (462)
||+|+||.+.+.. .+.-++.+...... |.. |. . ....++.++|+ +
T Consensus 252 GAaAvvl~~~~~~-----~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~ 325 (413)
T 3v7i_A 252 TAVAAVVTGRPRP-----ESVLRLDAAWHHTL-PGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDP 325 (413)
T ss_dssp EEEEEEEESSCCT-----TEEEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ccEEEEEEecCCC-----CCCEEEEccccEEe-CCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999875421 11223444332111 100 00 0 12357778899 8
Q ss_pred cCCCCCCccEEEecCCCHHHHHHHHHHcC--CCCCCCC---CCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 348 AGLQLDDIDLFEINEAFASQFVYCRNKLG--LDPEKIN---VNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~~~~~~e~LG--l~~~~vn---~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
+|++ ||+|-+|+.+......+.+.|| |+++++. .+ .- +||...||-...+.+++ +-+-+.| +++|.
T Consensus 326 ~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~--l~-~GNtssAsi~~~L~~~~-~~~~~~G--d~vll 396 (413)
T 3v7i_A 326 SSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS--YT-SGNRGGAAVFDILRRAH-DAGQKTG--SRAVL 396 (413)
T ss_dssp TTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHH--HT-TCBCGGGHHHHHHHHHH-HHCCCTT--CEEEE
T ss_pred CCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceE--ec-eeChHHHHHHHHHHHHH-hCCCCCC--CEEEE
Confidence 9998 9999999999999999999999 9999872 22 23 78888888766666665 2111233 66666
Q ss_pred EeecccceeEEEEE
Q 012506 423 SMCIGTGMGAAAVF 436 (462)
Q Consensus 423 ~~~~G~G~g~A~v~ 436 (462)
.. .|.|+.+..++
T Consensus 397 ~~-fG~Glt~~~~l 409 (413)
T 3v7i_A 397 YA-AAPGLTATALE 409 (413)
T ss_dssp EE-EETTTEEEEEE
T ss_pred EE-ECHHHhHhhhh
Confidence 54 67777765443
No 65
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.82 E-value=6.1e-19 Score=180.83 Aligned_cols=254 Identities=13% Similarity=0.077 Sum_probs=179.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV-D-MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999988752 2 5678999999999975454 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|....
T Consensus 174 i~~g~~~~vLvvg~e~~s~~~~---------------------------------------------------------- 195 (387)
T 3a5r_A 174 AENNKGARVLIVCSEMTTTCFR---------------------------------------------------------- 195 (387)
T ss_dssp HHHSTTCEEEEEEEECCTTTCC----------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEeccchhhc----------------------------------------------------------
Confidence 9999999999999999876210
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+|.. ... -....+...+|||+|+||.+.+..
T Consensus 196 ---------------~~~d-----------~~~---------------------~~~~~~~lfGDGA~A~vl~~~~~~-- 226 (387)
T 3a5r_A 196 ---------------GPSE-----------THL---------------------DSMIGQAILGDGAAAVIVGADPDL-- 226 (387)
T ss_dssp ---------------CCCS-----------SCC---------------------SSTTHHHHBCCEEEEEEEESSCCT--
T ss_pred ---------------CCCc-----------cch---------------------hhccccceeccceeEEEEecCCCc--
Confidence 0100 000 000112236999999999875421
Q ss_pred cC-CCceEEEEEEEEeccCCC---C-------------CCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCH
Q 012506 312 KG-LPILGVFRTFAAVGVDPA---I-------------MGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFA 365 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p~---~-------------~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa 365 (462)
+ ..+..++.+.+.... |. . ++. ....+++++|+++|++ .+|| +|-+|+++.
T Consensus 227 -~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 303 (387)
T 3a5r_A 227 -TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGP 303 (387)
T ss_dssp -TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCH
T ss_pred -cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCH
Confidence 2 111234544433211 11 0 110 1135778899999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeE-EEEEEe
Q 012506 366 SQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
.....+.+.||++++++..+ --.-.+||..+|+-...+.+++.+-++++ |+ .++.|... .|.|+.+ +++|+.
T Consensus 304 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~-fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 304 AILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFG-FGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhccccCCCCCCCCcceEEEEE-ecCcceeeehhhee
Confidence 88888889999998876531 01234899999999999999887765322 00 13555443 5666666 445554
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
.
T Consensus 383 ~ 383 (387)
T 3a5r_A 383 V 383 (387)
T ss_dssp C
T ss_pred c
Confidence 4
No 66
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.82 E-value=9.8e-19 Score=180.23 Aligned_cols=254 Identities=13% Similarity=0.087 Sum_probs=179.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VD-MPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDL 190 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CC-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-Cc-CChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999876 33 6778999999999975565 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|.....+
T Consensus 191 i~sg~~~~vLvvg~E~~s~~~~~~-------------------------------------------------------- 214 (402)
T 3awk_A 191 AENNKGARVLVACSEVTAVTFRAP-------------------------------------------------------- 214 (402)
T ss_dssp HHTSTTCEEEEEEEECTTTTCCCC--------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchhhcCC--------------------------------------------------------
Confidence 999999999999999987621100
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
.. ...++. ..+...+|||+|+||.+.+..
T Consensus 215 -----------------~d-----------------~~~~~~---------------~~~~lfGDGA~A~vl~~~~~~-- 243 (402)
T 3awk_A 215 -----------------SE-----------------THLDGL---------------VGSALFGDGAAALIVGSDPVP-- 243 (402)
T ss_dssp -----------------CT-----------------TCHHHH---------------HHHHHBCCEEEEEEEESSCCT--
T ss_pred -----------------Cc-----------------cCHHHh---------------hccccccCceEEEEEecCCCc--
Confidence 00 000000 001125899999999875421
Q ss_pred cC-CCceEEEEEEEEeccCC--CC-------------CCcc--------HHHHHHHHHHHcCCC-CCCccEEEecCCCHH
Q 012506 312 KG-LPILGVFRTFAAVGVDP--AI-------------MGVG--------PAVAIPAAVKSAGLQ-LDDIDLFEINEAFAS 366 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p--~~-------------~~~~--------~~~Ai~~aL~~AGl~-~~DID~~eihdafa~ 366 (462)
+ ..+..++.+.+....+. .. |+.. ...+++++|+++|++ .+|| +|-+|+.+..
T Consensus 244 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~ 321 (402)
T 3awk_A 244 -QEEKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDM-FWAVHPGGPA 321 (402)
T ss_dssp -TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHHHHTTCCCGGGE-EEEECCSCHH
T ss_pred -cccCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCcHH
Confidence 2 11223444443321110 00 1111 135677899999998 7788 8999999999
Q ss_pred HHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEEE-EEEe
Q 012506 367 QFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAAA-VFER 438 (462)
Q Consensus 367 ~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A~-v~~~ 438 (462)
....+.+.|||+++++..+ --+--+||...|+-...+.+++.+-++++ ++ .++.|... .|.|+.+.. +|+.
T Consensus 322 i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~g~g~d~vll~~-fG~G~t~~~~ll~~ 399 (402)
T 3awk_A 322 ILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIG-FGPGLTVETLLLRS 399 (402)
T ss_dssp HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhccccCCCcCCCCcceEEEEE-ecccceeeeheeee
Confidence 8888899999999987542 11234899999999998988887765322 01 14555544 566666644 5543
No 67
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.82 E-value=8.3e-19 Score=179.98 Aligned_cols=253 Identities=14% Similarity=0.086 Sum_probs=178.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~ 177 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGV-D-MPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDL 177 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCC-C-CchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 2 5678899999999975555 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|.....
T Consensus 178 i~~g~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 200 (389)
T 1i88_A 178 AENNKGARVLVVCSEVTAVTFRG--------------------------------------------------------- 200 (389)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEecccHhHcC---------------------------------------------------------
Confidence 99999999999999998762110
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
|.. ...++ ...+...+|||+|+||.+.+..
T Consensus 201 ----------------~~d-----------------~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~-- 230 (389)
T 1i88_A 201 ----------------PSD-----------------THLDS---------------LVGQALFGDGAAALIVGSDPVP-- 230 (389)
T ss_dssp ----------------CCT-----------------TCHHH---------------HHHHHHBCCEEEEEEEESSCCT--
T ss_pred ----------------ccc-----------------ccccc---------------ccccceEecceEEEEEecCCCC--
Confidence 000 00000 0001125899999999875421
Q ss_pred cC-CCceEEEEEEEEeccCC--CC-------------CCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCHH
Q 012506 312 KG-LPILGVFRTFAAVGVDP--AI-------------MGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFAS 366 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p--~~-------------~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa~ 366 (462)
+ ..+..++.+.+....+. .. ++. ....+++++|+++|++ .+|| +|-+|+++..
T Consensus 231 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~ 308 (389)
T 1i88_A 231 -EIEKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHPGGPA 308 (389)
T ss_dssp -TTSCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHH
T ss_pred -ccCCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHH
Confidence 2 11122444443321110 00 111 1235777899999998 8889 9999999999
Q ss_pred HHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEEE-EEE
Q 012506 367 QFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAAA-VFE 437 (462)
Q Consensus 367 ~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A~-v~~ 437 (462)
....+.+.||++++++..+ --.-.+||...|+-...+.+++.+-++.+ |+ .++.|... .|.|+.+.. +|+
T Consensus 309 i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~g~~~d~vll~~-fG~G~t~~~~ll~ 385 (389)
T 1i88_A 309 ILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFG-FGPGLTIETVVLR 385 (389)
T ss_dssp HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEE
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhccccCCcccCCCCceEEEEE-ecCccEEEEEEEE
Confidence 9888899999999876541 01234899999999999999887765222 00 14555543 566666644 444
No 68
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.82 E-value=3.8e-19 Score=183.94 Aligned_cols=254 Identities=12% Similarity=0.079 Sum_probs=179.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~ 195 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VN-MPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDL 195 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cc-cCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999876 33 6778999999999975565 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|.....+. + .
T Consensus 196 i~sg~~~~vLvvg~E~~s~~~~~~~-----------d-~----------------------------------------- 222 (413)
T 2p0u_A 196 AENNAGARVLAICSEVTAVTFRAPS-----------E-T----------------------------------------- 222 (413)
T ss_dssp HHHSTTCEEEEEEEECSTTTCCCCC-----------T-T-----------------------------------------
T ss_pred HHhCCCCEEEEEEEhhcchhccCCC-----------c-c-----------------------------------------
Confidence 9999999999999999876211100 0 0
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
..++ ...+...+|||+|+||.+.+..
T Consensus 223 -------------------------------------~~~~---------------~~~~~lfGDGA~A~vl~~~~~~-- 248 (413)
T 2p0u_A 223 -------------------------------------HIDG---------------LVGSALFGDGAAAVIVGSDPRP-- 248 (413)
T ss_dssp -------------------------------------CHHH---------------HHHHHHBCCEEEEEEEESSCCT--
T ss_pred -------------------------------------Chhh---------------hcccceeecccEEEEEecCCCc--
Confidence 0000 0011125899999999875421
Q ss_pred cCC-CceEEEEEEEEeccCC--C-------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCHH
Q 012506 312 KGL-PILGVFRTFAAVGVDP--A-------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFAS 366 (462)
Q Consensus 312 ~g~-~~~~~i~g~~~~~~~p--~-------------~~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa~ 366 (462)
+. .+..++.+.+....+. . .++. ....+++++|+++|++ .+|| +|-+|+++..
T Consensus 249 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~ 326 (413)
T 2p0u_A 249 -GIERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPA 326 (413)
T ss_dssp -TTCCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHH
T ss_pred -cccCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHHHHHHcCCCCccce-EEEECCCCHH
Confidence 21 1123444444321110 0 0111 1235778999999998 7888 8999999999
Q ss_pred HHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEEE-EEEe
Q 012506 367 QFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAAA-VFER 438 (462)
Q Consensus 367 ~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A~-v~~~ 438 (462)
+...+.+.||++++++..+ --.--+||...||-...+.+++.+-++++ |+ .++.|... .|.|+.+.. +|+.
T Consensus 327 i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~g~~~d~vll~~-fG~G~t~~~~ll~~ 404 (413)
T 2p0u_A 327 ILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKSTFGEGSEWGFLIG-FGPGLTVETLLLRA 404 (413)
T ss_dssp HHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhccccCCcccCCCcceEEEEE-eCccceeeeeeEEE
Confidence 9888999999999876531 01234899999999999999887765322 00 14555543 566766644 5544
No 69
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.82 E-value=6.5e-19 Score=181.54 Aligned_cols=253 Identities=12% Similarity=0.075 Sum_probs=179.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~ 182 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGV-D-MPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDL 182 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCC-E-ESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998753 2 5678999999999975554 999999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|....
T Consensus 183 i~~g~~~~vLvvg~E~~s~~~~---------------------------------------------------------- 204 (402)
T 1ee0_A 183 AENNKGSRVLIVCSEITAILFH---------------------------------------------------------- 204 (402)
T ss_dssp HHHSTTCCEEEEEEECGGGGCC----------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchhhc----------------------------------------------------------
Confidence 9999999999999999875110
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+|.. . ..++ ...+...+|||+|+||.+.+.
T Consensus 205 ---------------~~~d-----------~------~~~~---------------~~~~~lfGDGA~A~vl~~~~~--- 234 (402)
T 1ee0_A 205 ---------------GPNE-----------N------HLDS---------------LVAQALFGDGAAALIVGSGPH--- 234 (402)
T ss_dssp ---------------CCCT-----------T------CHHH---------------HHHTTTBCCEEEEEEEESSCC---
T ss_pred ---------------CCcc-----------c------chhh---------------hccceeEecceEEEEEecCCC---
Confidence 0000 0 0000 001223699999999987542
Q ss_pred cC-CCceEEEEEEEEeccCCC----------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCH
Q 012506 312 KG-LPILGVFRTFAAVGVDPA----------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFA 365 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p~----------------~~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa 365 (462)
.+ ..+..++.+.+.... |. .++. ....+++++|+++|++ .+|| +|-+|+++.
T Consensus 235 ~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 312 (402)
T 1ee0_A 235 LAVERPIFEIVSTDQTIL-PDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGR 312 (402)
T ss_dssp TTTCCCCEEEEEEEEEEC-TTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSH
T ss_pred ccccCCceEEEeeeeEEc-CCchHhcCceeccCceEEEecchHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCCCH
Confidence 12 111234544433211 11 0111 1135777899999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEE-EEEEe
Q 012506 366 SQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
.....+.+.||++++++..+ --.--+||...|+-...+.+++.+-++++ |+ .++.|... .|.|+.++ ++|+-
T Consensus 313 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~-fG~G~t~~~~ll~~ 391 (402)
T 1ee0_A 313 AILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFG-FGPGMTVETVVLRS 391 (402)
T ss_dssp HHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHHhccccCCCCCCCCcceEEEEE-ecCCcEEEEEEEEE
Confidence 98888899999999887541 11234899999999999999887765222 00 03444443 56666664 45544
No 70
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.81 E-value=1.8e-18 Score=178.91 Aligned_cols=253 Identities=13% Similarity=0.081 Sum_probs=178.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++.++. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP-D-LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998763 2 5678899999999975454 9999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+++|||+|+|.+|.....+. + .
T Consensus 202 ~~G~~~~vLvvg~E~~s~~~~~~~-----------d-----~-------------------------------------- 227 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVTFRGPS-----------E-----T-------------------------------------- 227 (413)
T ss_dssp HTSTTCCEEEEEEECTTTTCCCCC-----------T-----T--------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhhhcCCC-----------c-----c--------------------------------------
Confidence 999999999999999876211000 0 0
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
..++ ..++...+|||+|+||.+.+..
T Consensus 228 ------------------------------------~~~~---------------~~~~~lfGDGA~A~vl~~~~~~--- 253 (413)
T 1xes_A 228 ------------------------------------HLDS---------------LVGQALFGDGASALIVGADPIP--- 253 (413)
T ss_dssp ------------------------------------CHHH---------------HHHHHHBCCEEEEEEEESSCCT---
T ss_pred ------------------------------------chhh---------------cccceeEecccEEEEEecCCCc---
Confidence 0000 0011126899999999875421
Q ss_pred CC-CceEEEEEEEEeccCC--C-------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCHHH
Q 012506 313 GL-PILGVFRTFAAVGVDP--A-------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQ 367 (462)
Q Consensus 313 g~-~~~~~i~g~~~~~~~p--~-------------~~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa~~ 367 (462)
++ .+..++.+.+....+. . .++. ....+++++|+++|++ .+|| +|-+|+++...
T Consensus 254 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i 332 (413)
T 1xes_A 254 QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAI 332 (413)
T ss_dssp TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH
T ss_pred cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHH
Confidence 21 1123455444321100 0 0110 1235778899999998 8888 89999999988
Q ss_pred HHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEE-EEEEe
Q 012506 368 FVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
...+.+.||++++++..+ --.--+||...|+-...+.+++.+-++++ |+ .++.|... .|.|+.+. ++|+.
T Consensus 333 ~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~-fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 333 LDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFG-FGPGLTIETVVLKS 409 (413)
T ss_dssp HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCCCCCcceEEEEE-ecCCcEEeEEEEEe
Confidence 888899999999987431 00233899999999999999887765322 00 13555543 56666664 45543
No 71
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.81 E-value=1.9e-19 Score=188.15 Aligned_cols=256 Identities=17% Similarity=0.155 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHc
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~s 154 (462)
.+|+.+|+++||+++|+++++||.|++++.. +.. .+..+.+++..+|++....+++| +.+|+++++||..|.++|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999987 443 67889999999999744448999 79999999999999999997
Q ss_pred ----cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 155 ----GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 155 ----G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
|.++.|||+|+|.+|.. .+.. .+ +..+
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~------------~~~~--------------------------~~-----~~~~------ 219 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTM------------VRSE--------------------------LE-----SIDA------ 219 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGG------------HHHH--------------------------HH-----HHHH------
T ss_pred ccccCCCCEEEEEEEeecchh------------cCcc--------------------------cc-----cccc------
Confidence 99999999999998761 0000 00 0000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
.. + ....+...+|||+|+||.+.+...
T Consensus 220 -----------------~~-----------~-------------------------d~~t~~LFGDGAaAvVl~~~~~~~ 246 (465)
T 3e1h_A 220 -----------------LQ-----------E-------------------------TRIGIALFSDCASAVILSNGIGEA 246 (465)
T ss_dssp -----------------HT-----------C-------------------------CCCHHHHBCCEEEEEEEECCTTCC
T ss_pred -----------------cc-----------c-------------------------ccccccccccceeEEEEEccCCCc
Confidence 00 0 001122369999999998753211
Q ss_pred hcCCCceEEEEEEEEeccCC--CC-------------CCc--------cHHHHHHHHHHH-------cCCCCCCccEEEe
Q 012506 311 RKGLPILGVFRTFAAVGVDP--AI-------------MGV--------GPAVAIPAAVKS-------AGLQLDDIDLFEI 360 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~~p--~~-------------~~~--------~~~~Ai~~aL~~-------AGl~~~DID~~ei 360 (462)
....+...+.++.....+. .. .+. ....++.++|++ +|++++|||+| +
T Consensus 247 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~ 324 (465)
T 3e1h_A 247 -PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M 324 (465)
T ss_dssp -TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E
T ss_pred -cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-e
Confidence 0012233455443321110 00 000 113567778887 68999999999 9
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHH----HHhcCCCCcEEEEEeecccceeEE-E
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHE----MKRRGRDCRFGVISMCIGTGMGAA-A 434 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~q----L~~~~~~~~~gl~~~~~G~G~g~A-~ 434 (462)
|+++..+...+.++|||+++++..+=-. --+||...||-...+.+++.+ ++..+...+++|... .|.|+.+. +
T Consensus 325 Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~g-fG~Glt~~~~ 403 (465)
T 3e1h_A 325 HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGINVEMC 403 (465)
T ss_dssp CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEE-EETTTEEEEE
T ss_pred cCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEE-EhHHHhhhhe
Confidence 9999999999999999999987432111 125888888855555554432 111100115566554 67777764 4
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+.
T Consensus 404 llr~ 407 (465)
T 3e1h_A 404 MLKR 407 (465)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5544
No 72
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.81 E-value=4.2e-19 Score=216.86 Aligned_cols=264 Identities=20% Similarity=0.234 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++.+||++||++++.++ +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 45889999999999999988775 588887544320 012357789999999 799999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|||++.||++|++.|++|++|++||+|++.+... . ...+
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p----------~-----------~~~~---------------- 199 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKP----------N-----------SSLQ---------------- 199 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCH----------H-----------HHHH----------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCH----------H-----------HHHH----------------
Confidence 99999999999999999999999999999999987541 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNS 291 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~ 291 (462)
+.+ .| .+++|..+| | ||. +|..
T Consensus 200 --------~~~------~~------------------------~ls~~g~c~------------~-Fd~~adG~~----- 223 (2512)
T 2vz8_A 200 --------FMK------LG------------------------MLSQDGTCR------------S-FDAEGTGYC----- 223 (2512)
T ss_dssp --------HHH------TT------------------------CBCTTCSCC------------S-SSTTCCCBC-----
T ss_pred --------Hcc------CC------------------------CCCCCCCCC------------C-CCCCCCCcc-----
Confidence 000 00 123343333 3 654 4544
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC---C---CCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---I---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~---~---~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+||++++||.+.+.|+ ++++.|+|++.+...-. . .+.+...+|+++|++|||+++||||+|.|.+.+
T Consensus 224 --~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT 297 (2512)
T 2vz8_A 224 --RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT 297 (2512)
T ss_dssp --BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred --eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence 79999999999999886 59999999998754321 1 123446899999999999999999999999887
Q ss_pred HH----HHH-HHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 366 SQ----FVY-CRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 366 ~~----~~~-~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
.. +.. +.+.+|-.. .|+.+..-+..+||..+|+|+..++.++..|+++.-
T Consensus 298 ~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 377 (2512)
T 2vz8_A 298 KVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVV 377 (2512)
T ss_dssp TTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEec
Confidence 53 333 345566432 344443334449999999999999999999987520
Q ss_pred ------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++++++..+.||.++++||+...
T Consensus 378 ~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 378 DRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp CSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 0135667777778899999998643
No 73
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.81 E-value=7.3e-20 Score=182.17 Aligned_cols=251 Identities=18% Similarity=0.227 Sum_probs=167.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|++++|||.+++|+.++. . ..+..++..+|+ |+++|+.+|+|+++||..|+.+|
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~-~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I 124 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---N-VTANYVARHLKI----PFLCLFGACSTSMESIAISSALI 124 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---S-TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---h-hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999998762 2 256677777765 79999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+++||++|+|+||+.+..+..
T Consensus 125 ~sG~~~~VLVVGaE~~S~aerq~r~------------------------------------------------------- 149 (347)
T 3lma_A 125 DGGFAKRALAATSSHNATAERQFRY------------------------------------------------------- 149 (347)
T ss_dssp HTTSCSEEEEEEEECGGGTTCCC---------------------------------------------------------
T ss_pred hcCCCCEEEEEEeccccchhhhccC-------------------------------------------------------
Confidence 9999999999999999874321100
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
|. ++...+|.+.. . ..|||+|+||.+...
T Consensus 150 ---------------p~----------------------e~g~q~p~ta~---~-------t~dGAGA~VL~~~g~---- 178 (347)
T 3lma_A 150 ---------------PT----------------------EYGGQKPGTAT---S-------TVTGSGAVVLSQQPG---- 178 (347)
T ss_dssp -------------------------------------------------------------CCCEEEEEEEESSCC----
T ss_pred ---------------cc----------------------hhcccCCchhc---E-------EccceeEEEEEecCC----
Confidence 00 00001121111 1 258999999986431
Q ss_pred CCCceEEEEEEEEe------ccCCCCCCccH----HHHHHHHHHHcCCCCCCccEEE---ecCCCHHHHHHHHHHcCCCC
Q 012506 313 GLPILGVFRTFAAV------GVDPAIMGVGP----AVAIPAAVKSAGLQLDDIDLFE---INEAFASQFVYCRNKLGLDP 379 (462)
Q Consensus 313 g~~~~~~i~g~~~~------~~~p~~~~~~~----~~Ai~~aL~~AGl~~~DID~~e---ihdafa~~~~~~~e~LGl~~ 379 (462)
.| +|.+...- ..+|..|+... ...+.+.|+++|++++|+|+|- +|+.........++++|++.
T Consensus 179 --~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 179 --GI--KITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINV 254 (347)
T ss_dssp --SE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCC
T ss_pred --CC--ceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCCh
Confidence 22 23333221 12555555322 3466889999999999999999 77777777788889999998
Q ss_pred CCCCCCCCccccCCc---------cchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee--------------EEEEE
Q 012506 380 EKINVNGGALAIGHP---------LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG--------------AAAVF 436 (462)
Q Consensus 380 ~~vn~~GG~~a~Ghp---------~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g--------------~A~v~ 436 (462)
+++...=|.+-++.. -||+...-.-.++.+|++... ++-|+.. .|..+. =|+++
T Consensus 255 ~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~--~ril~~~-tGalls~~~~~q~~sip~iah~v~~ 331 (347)
T 3lma_A 255 GTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRL--NRVLVVA-TGALLSPTIIQQKESIPCIAHGVVF 331 (347)
T ss_dssp GGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSC--SEEEEEE-EEECCCHHHHHTTCCCCEEEEEEEE
T ss_pred hHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcc--cEEEEEe-cccccCcchhccCCccChhhEEEEE
Confidence 654433233334422 267777777778888885544 4444432 333322 25788
Q ss_pred Eecccccc
Q 012506 437 ERGDCADE 444 (462)
Q Consensus 437 ~~~~~~~~ 444 (462)
|+.++.+-
T Consensus 332 e~~~~~~~ 339 (347)
T 3lma_A 332 ERAERGNA 339 (347)
T ss_dssp EEC-----
T ss_pred Eeecccch
Confidence 88776653
No 74
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.81 E-value=9.5e-20 Score=187.43 Aligned_cols=248 Identities=13% Similarity=0.081 Sum_probs=176.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||++ +++++||.|++|+..+... .++.+..++..+|++.++++++++.+|+||+.||..|++
T Consensus 47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~ 123 (396)
T 1xpm_A 47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123 (396)
T ss_dssp TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 4678999999999999998 7899999999999877654 577899999999997568999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|. +....
T Consensus 124 ~I~sg~~~~vLvvg~e~-s~~~~--------------------------------------------------------- 145 (396)
T 1xpm_A 124 YLATRPNEKVLVIATDT-ARYGL--------------------------------------------------------- 145 (396)
T ss_dssp HHTTCTTCEEEEEEEEE-ECCCT---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEeehh-hcccc---------------------------------------------------------
Confidence 99999999999999996 33100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. + +....+|||+|+||.+..
T Consensus 146 ----------------~~---------------------------------~-------~~~~~GdGA~A~vl~~~~--- 166 (396)
T 1xpm_A 146 ----------------NS---------------------------------G-------GEPTQGAGAVAMVIAHNP--- 166 (396)
T ss_dssp ----------------TC---------------------------------S-------SGGGCEEEEEEEEEEESC---
T ss_pred ----------------CC---------------------------------C-------CCcccccceEEEEeccCC---
Confidence 00 0 011268999999998642
Q ss_pred hcCCCceEEEEEEEEec------cCCCC------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVG------VDPAI------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~------~~p~~------~~~~--------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|.++..+...
T Consensus 167 ----~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~ 242 (396)
T 1xpm_A 167 ----SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKK 242 (396)
T ss_dssp ----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHH
T ss_pred ----ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHH
Confidence 2333333222221 12221 1111 3568899999999999999999999999998887
Q ss_pred HHHHc-----CCCCCCCCCC-----CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEec
Q 012506 371 CRNKL-----GLDPEKINVN-----GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 371 ~~e~L-----Gl~~~~vn~~-----GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
..+.| |++++++..+ -=.--+||...+|-...+.+++.+-+-+.| .++.+++ .|.|... +.+++..
T Consensus 243 ~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~G-d~ill~s--~GsG~~~~~~~~~v~ 319 (396)
T 1xpm_A 243 ALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAG-ETIGLFS--YGSGSVGEFYSATLV 319 (396)
T ss_dssp HHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTT-CEEEEEE--EETTTEEEEEEEEEC
T ss_pred HHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCC-CEEEEEE--ECcchhheEEEEEEc
Confidence 77877 6665543100 001238999999988888887765111223 1444443 4666665 4456655
Q ss_pred cccccc
Q 012506 440 DCADEL 445 (462)
Q Consensus 440 ~~~~~~ 445 (462)
+...+.
T Consensus 320 ~~~~~~ 325 (396)
T 1xpm_A 320 EGYKDH 325 (396)
T ss_dssp TTGGGG
T ss_pred ccHHHH
Confidence 555443
No 75
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.78 E-value=2.9e-18 Score=179.16 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC--CCCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl--p~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+.++.+|+.+|+++||+++|+++++||.|++|+..+... .+..+..++..+|+ +.++++++++.+|+||+.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 5788999999999999999999999999999999876654 67789999999998 45789999999999999999999
Q ss_pred HHHHHccCC--CEEEEEeecCCC
Q 012506 149 AAAIKAGFY--DIGIGAGLESMT 169 (462)
Q Consensus 149 a~~I~sG~~--d~vLv~G~E~ms 169 (462)
.++|++|.+ +.|||+|+|.++
T Consensus 127 ~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 127 VNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp HHHHHSTTCCSCEEEEEEEEEEC
T ss_pred HHHHHcCCCcCCeEEEEEeeecc
Confidence 999999998 999999999874
No 76
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.78 E-value=1.1e-18 Score=181.38 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=97.4
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC--CCCc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETV 129 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl--p~~~ 129 (462)
.+..|.+++.+... -.+.+..+|+.+|+++||+++|+++++||.|++++.+++.. .+..+..++..+|+ ..++
T Consensus 35 ~~~~Gig~r~~~va----~~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~-~ps~A~~v~~~LGl~g~~~~ 109 (460)
T 2v4w_A 35 KYTVGLGQTRMGFC----SVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDI 109 (460)
T ss_dssp CCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCC
T ss_pred HeeeeeeeEEEEEC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCCCCCCc
Confidence 44567777664332 24678999999999999999999999999999999887664 57788999999999 2468
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCC--CEEEEEeecCCC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLESMT 169 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~--d~vLv~G~E~ms 169 (462)
++++++.+|+++++||..|.+.|++|.+ +.+||+|+|.++
T Consensus 110 ~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 110 EGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC
T ss_pred EEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc
Confidence 9999999999999999999999999996 999999999975
No 77
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.74 E-value=4.3e-18 Score=174.44 Aligned_cols=244 Identities=13% Similarity=0.066 Sum_probs=170.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||++++ +++||.|++++.+++.. .+..+..++..+|++..+++++++.+|+|++.||..|.+
T Consensus 52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 128 (388)
T 3v4n_A 52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN 128 (388)
T ss_dssp TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHH
Confidence 578999999999999999997 99999999999887765 677899999999997558999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.|||+|+|.++...
T Consensus 129 ~i~sg~~~~vLVvg~e~~s~~~---------------------------------------------------------- 150 (388)
T 3v4n_A 129 HVALHPDKKVLVVAADIAKYGL---------------------------------------------------------- 150 (388)
T ss_dssp HHHHCTTCEEEEEEEEEECCCT----------------------------------------------------------
T ss_pred HHhcCCCCEEEEEEehhhcccC----------------------------------------------------------
Confidence 9999999999999999986510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
++. | ++ ..+|||+|+||....
T Consensus 151 ----------------~~~-----------~---------------~~--------------lfGDGA~A~ll~~~~--- 171 (388)
T 3v4n_A 151 ----------------NSG-----------G---------------EP--------------TQGAGAVAMLVSSEP--- 171 (388)
T ss_dssp ----------------TCT-----------T---------------GG--------------GCEEEEEEEEEEESC---
T ss_pred ----------------CCC-----------C---------------CC--------------ccccceeEEEeecCC---
Confidence 000 0 01 158999999998742
Q ss_pred hcCCCceEEE-EEEEEec-----cCCCCCC----c----------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH--
Q 012506 311 RKGLPILGVF-RTFAAVG-----VDPAIMG----V----------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-- 368 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~-----~~p~~~~----~----------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~-- 368 (462)
.++... ...+... ..|.... . ....+++++|+++|++++|||+|-+|++|..+.
T Consensus 172 ----~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~k 247 (388)
T 3v4n_A 172 ----RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKK 247 (388)
T ss_dssp ----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHH
T ss_pred ----CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHH
Confidence 122110 0011110 1121100 0 123578889999999999999999999886542
Q ss_pred ----------HHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHH-HHhcCCCCcEEEEEeecccceeEEE-EE
Q 012506 369 ----------VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE-MKRRGRDCRFGVISMCIGTGMGAAA-VF 436 (462)
Q Consensus 369 ----------~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~q-L~~~~~~~~~gl~~~~~G~G~g~A~-v~ 436 (462)
....+.||++.+++..+ .--+||...++-...+.+++.+ -+-+.| .++.+.+ .|.|..+.+ .+
T Consensus 248 a~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~g~~~~G-d~ill~s--~GsG~~ae~~~~ 322 (388)
T 3v4n_A 248 ALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENATTLTAG-NQIGLFS--YGSGAVAEFFTG 322 (388)
T ss_dssp HHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHCSSCCTT-CEEEEEE--EETTTEEEEEEE
T ss_pred HHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhcCcCCCC-CEEEEEE--ecCcceeEEEEE
Confidence 23456777776654433 2348999999977777777665 111223 1444444 566666543 33
Q ss_pred Eeccccc
Q 012506 437 ERGDCAD 443 (462)
Q Consensus 437 ~~~~~~~ 443 (462)
.-.+.+.
T Consensus 323 ~v~~~~~ 329 (388)
T 3v4n_A 323 ELVAGYQ 329 (388)
T ss_dssp EECTTGG
T ss_pred EEccCHH
Confidence 3334443
No 78
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.74 E-value=8.5e-18 Score=173.88 Aligned_cols=244 Identities=14% Similarity=0.047 Sum_probs=169.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||++++ +++||.|++++.+++.. .+..+..++..+|++..+++++++.+|+++++||..|.+
T Consensus 81 ~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 157 (425)
T 3sqz_A 81 ITDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQ-SKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKL 157 (425)
T ss_dssp TTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCS-SSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccc-cchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHH
Confidence 467899999999999999998 99999999999887654 577899999999997558999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
.|++|.++.|||+|+|.++....
T Consensus 158 ~i~sg~~~~vLVvgae~~s~~~~--------------------------------------------------------- 180 (425)
T 3sqz_A 158 HVEKHPDTRVLVLASDIAKYGIG--------------------------------------------------------- 180 (425)
T ss_dssp HHHHSTTCEEEEEEEEEECCCTT---------------------------------------------------------
T ss_pred HHHcCCCCeEEEEEEehhcccCC---------------------------------------------------------
Confidence 99999999999999999875100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ + ++...+|||+|+||....
T Consensus 181 -----------------~---------------------------------~-------~~~lfGDGA~A~ll~~~~--- 200 (425)
T 3sqz_A 181 -----------------T---------------------------------P-------GESTQGAGSIAMLVKKDP--- 200 (425)
T ss_dssp -----------------S---------------------------------G-------GGGGCEEEEEEEEEEESC---
T ss_pred -----------------C---------------------------------C-------CCCcccceeeEEEeecCC---
Confidence 0 0 011158999999998742
Q ss_pred hcCCCceEEEE-EEEEec-----cCCCC---C-Ccc----------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH-
Q 012506 311 RKGLPILGVFR-TFAAVG-----VDPAI---M-GVG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV- 369 (462)
Q Consensus 311 ~~g~~~~~~i~-g~~~~~-----~~p~~---~-~~~----------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~- 369 (462)
.++.... ..+... ..|.. . ..+ ...+++++|+++|++++|||+|-+|++|..+..
T Consensus 201 ----~il~~~~~s~~~~~d~~df~~p~~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~k 276 (425)
T 3sqz_A 201 ----RILILHDETLAQTRDIMDFWRPNYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALK 276 (425)
T ss_dssp ----SSEEECSCCEEEECCCCSEECCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHH
T ss_pred ----ceEEEEeecccchhhcccccccCCCcceeeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHH
Confidence 1221111 011111 12211 0 011 245788899999999999999999998866432
Q ss_pred ------------HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHH-HHhcCCCCcEEEEEeecccceeEEE-E
Q 012506 370 ------------YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE-MKRRGRDCRFGVISMCIGTGMGAAA-V 435 (462)
Q Consensus 370 ------------~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~q-L~~~~~~~~~gl~~~~~G~G~g~A~-v 435 (462)
...+.||++.+++..+ .--+||...++-...+.+++.+ =+-+.| .++.+++ .|.|....+ .
T Consensus 277 a~~ril~~~~~~~~~~~l~~~~e~~~~~--~~~~GNt~sASi~l~L~~~l~~~g~l~~G-d~ill~s--~GsG~~ae~~s 351 (425)
T 3sqz_A 277 GFNKIMDKQVPSDLQEKLKVNFEASILY--SKQIGNIYTGSLFLGLLSLLENSQNLVAG-DKIALFS--YGSGAVAEIFT 351 (425)
T ss_dssp HHHHHCCTTSCHHHHHHHHHHHHHHHTT--HHHHBCCGGGHHHHHHHHHHHHCSSCCTT-CEEEEEE--EETTTEEEEEE
T ss_pred HHHHHHhccchHHHHHHhCCCHHHHhhH--HhccCccHHHHHHHHHHHHHHhcCCCCCC-CEEEEEc--ccCCcceEEEE
Confidence 3445677766654332 2348999999977777777765 111223 1455554 466665533 3
Q ss_pred EEeccccc
Q 012506 436 FERGDCAD 443 (462)
Q Consensus 436 ~~~~~~~~ 443 (462)
+.-.+...
T Consensus 352 ~~v~~~~~ 359 (425)
T 3sqz_A 352 GTLVKGFK 359 (425)
T ss_dssp EEECTTGG
T ss_pred EEEcccHH
Confidence 43334443
No 79
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=166.62 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=94.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHH---HcCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF---YAGFP 126 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~---~~Glp 126 (462)
...++.+.+.+.+... ..+.+..+|+.+|+++||+++|+++++||.|++++.++... .+..+..++. .+|++
T Consensus 52 ~~~~~~~~Gi~~r~~~----~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~~ 126 (478)
T 2p8u_A 52 AGKYTIGLGQAKMGFC----TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGNT 126 (478)
T ss_dssp TTCCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTCC
T ss_pred hhHhecccCceEEEeC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCCC
Confidence 3455677777766542 24778999999999999999999999999999999877654 5667788884 45554
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccC--CCEEEEEeecC
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGF--YDIGIGAGLES 167 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~--~d~vLv~G~E~ 167 (462)
.+++++++.+|++|+.||..|.+.|++|. ++.|||+|+|.
T Consensus 127 -~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 127 -DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp -CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred -CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 68999999999999999999999999999 99999999995
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.48 E-value=9.3e-14 Score=145.44 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=82.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp--~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|++ ..+.+++++.+|+++.+|+..|
T Consensus 50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A 128 (460)
T 2wya_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA 128 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence 5789999999999999999999999999999999988765 677888888888652 3578899999999999999999
Q ss_pred HHHHHccCCCEEEEEeec
Q 012506 149 AAAIKAGFYDIGIGAGLE 166 (462)
Q Consensus 149 a~~I~sG~~d~vLv~G~E 166 (462)
.+.|++|.++.++++.++
T Consensus 129 ~~~i~~g~~~~~lvvv~~ 146 (460)
T 2wya_A 129 ANWMESSSWDGRYAMVVC 146 (460)
T ss_dssp HHHHTSTTCCSCEEEEEE
T ss_pred HHHHHhccccceEEEEEe
Confidence 999999998766555443
No 81
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=92.48 E-value=0.63 Score=45.81 Aligned_cols=77 Identities=22% Similarity=0.279 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-+. ..+.....+..++||+.+.+ ...+ -.||+|...-.....++-+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~------a~di--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP------AYDV--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC------EEEE--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce------EEEe--ecchhhHHHHHHHhhhhhh
Confidence 579999999999999999988754 23455677788999996432 1122 2478877776666666665
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.+. .+++|+.
T Consensus 139 ~g~-~~~~Lvv 148 (350)
T 4ewp_A 139 SGT-ARHVLVV 148 (350)
T ss_dssp TTS-CSEEEEE
T ss_pred CCC-ccceeEe
Confidence 543 2566654
No 82
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=91.32 E-value=0.43 Score=47.26 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc--------------eEEecCCCc-hHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP--------------VRTVNRQCS-SGL 142 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p--------------~~~v~~~Cs-Sgl 142 (462)
.+.+++++.|+++|++++|+|.|+-|-...- +..+...+....|+|...- ++.-..+|+ |..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~---g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSGV---GSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHHH---HHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHHH---HHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 4556678999999999999999997532111 3445667777888864221 222233454 455
Q ss_pred HHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 143 QAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 143 ~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
.........++.|+++.+|++++-..
T Consensus 285 v~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 285 VTFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCcccEEEEEecccc
Confidence 56677888999999999999998663
No 83
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=88.53 E-value=0.97 Score=45.27 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 381 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~ 381 (462)
..|++++|+++|++++|||++-+--+ +.....+..+.||+.+..
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 47899999999999999999876433 345567788899997653
No 84
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=87.08 E-value=1.3 Score=45.77 Aligned_cols=43 Identities=21% Similarity=0.140 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+--+ +.....+..+.||+.+.
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 161 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDR 161 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCC
Confidence 46899999999999999999876533 34556778889999764
No 85
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=85.71 E-value=1.4 Score=43.42 Aligned_cols=82 Identities=16% Similarity=0.059 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHH--
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAA-- 151 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~-- 151 (462)
...++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..+ -|..++|-..+|..+...
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 320 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQV------SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence 4456778999999999999999886221 2334566778899985432222 255666666666665444
Q ss_pred HHccCCCEEEEEeecC
Q 012506 152 IKAGFYDIGIGAGLES 167 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ 167 (462)
++.| |.++.+|+-.
T Consensus 321 ~~~G--d~vll~~~G~ 334 (345)
T 3s21_A 321 LKKG--DRIALLGIGS 334 (345)
T ss_dssp CCTT--CEEEEEEEET
T ss_pred CCCC--CEEEEEEECh
Confidence 3344 7888887755
No 86
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=84.83 E-value=1.2 Score=44.27 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I 152 (462)
+.+.++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..+ -|..++|-..+|..+...+
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l 327 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQP------NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDI 327 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhC
Confidence 34567889999999999999998876322 2334567778899985433222 3666777777777776665
Q ss_pred HccCCCEEEEEeecC
Q 012506 153 KAGFYDIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ 167 (462)
+.| |.+|.+|+-.
T Consensus 328 ~~G--d~vll~~fG~ 340 (359)
T 3h78_A 328 QPG--QRVLVLTYGS 340 (359)
T ss_dssp CTT--CEEEEEEEET
T ss_pred CCC--CEEEEEEEch
Confidence 555 6777777543
No 87
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=83.65 E-value=2.6 Score=41.87 Aligned_cols=82 Identities=10% Similarity=-0.054 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
+...++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..++ |..++|-..+|. .++
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~---~~~ 336 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQA------NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALE---TMR 336 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHH---HHH
Confidence 44567789999999999999999876321 23445677888999864433333 333444444444 345
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|.. |.+|.+|+-.
T Consensus 337 ~~g~~~~Gd~vll~~fG~ 354 (365)
T 3gwa_A 337 ANGTLARGMRLMLLGFGV 354 (365)
T ss_dssp HTTCCCTTCEEEEEEEET
T ss_pred HcCCCCCCCEEEEEEEeh
Confidence 66653 6888877643
No 88
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=83.52 E-value=2.2 Score=40.94 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
-..++++++|+++|++++|||.++.-.. +......+...+|++......+ -|..++|+..+|..+ ++
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~ 283 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA------NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LK 283 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HH
Confidence 5567889999999999999998876221 2233445667789864322222 255666777666554 55
Q ss_pred ccCC---CEEEEEeecC
Q 012506 154 AGFY---DIGIGAGLES 167 (462)
Q Consensus 154 sG~~---d~vLv~G~E~ 167 (462)
.|+. |.+|+.|+-.
T Consensus 284 ~~~~~~g~~vl~~~~G~ 300 (313)
T 1zow_A 284 NGKLKDDDTIVLVGFGG 300 (313)
T ss_dssp TTCCCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEch
Confidence 5654 7888887654
No 89
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=82.79 E-value=2.2 Score=41.51 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I 152 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|......+ -|..++|...+|..+ +
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA------NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 45677899999999999999998877221 2233445777889974322222 255566666666544 5
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|+. |.+|..|+-.
T Consensus 295 ~~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 295 RQGILRDGGNMVLTGFGA 312 (331)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEeH
Confidence 55543 6888887765
No 90
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=82.51 E-value=2.9 Score=42.34 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-+--+ +.....+..+.||+.+
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~ 187 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRG 187 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCC
Confidence 47899999999999999999876432 3345677788999976
No 91
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=82.49 E-value=2.5 Score=42.41 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+.+.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~ 153 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLT 153 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCC
Confidence 47899999999999999999876432 33456677889999764
No 92
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=82.39 E-value=2.2 Score=41.43 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-+-.+. .....+..+.||+.+
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 478999999999999999998774322 345667788899964
No 93
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=82.36 E-value=2.6 Score=40.91 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~~ 151 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|.....+. -|..++|...++..+
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~~------~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~--- 302 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQA------NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL--- 302 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCS------CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---
Confidence 35567899999999999999998876321 2333445677899975422221 145555655555544
Q ss_pred HHccC---CCEEEEEeecC
Q 012506 152 IKAGF---YDIGIGAGLES 167 (462)
Q Consensus 152 I~sG~---~d~vLv~G~E~ 167 (462)
++.|+ -|.+|+.|+-.
T Consensus 303 ~~~~~~~~g~~~l~~~~G~ 321 (335)
T 1u6e_A 303 LTTGAAKPGDLALLIGYGA 321 (335)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEeh
Confidence 34443 37888877643
No 94
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=82.00 E-value=2.8 Score=40.91 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE-E----ecCCCchHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-T----VNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~-~----v~~~CsSgl~Ai~~Aa~~ 151 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|...... + -|..++|...+|..+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQA------NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 45677899999999999999998876321 223344577789997541222 1 255566666666544
Q ss_pred HHccCC---CEEEEEeecC
Q 012506 152 IKAGFY---DIGIGAGLES 167 (462)
Q Consensus 152 I~sG~~---d~vLv~G~E~ 167 (462)
++.|.. |.+|+.|+-.
T Consensus 302 ~~~g~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIGFGA 320 (339)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEch
Confidence 455543 6888887754
No 95
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=81.59 E-value=2.6 Score=42.38 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||.+-+-.+ +.....+..+.||+.+.
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPT 166 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCc
Confidence 47899999999999999998775432 34456677889999653
No 96
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=81.42 E-value=2.7 Score=41.94 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.. +.....+..+.||+...
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 153 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPY 153 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCC
Confidence 47889999999999999999876432 34456677889999653
No 97
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=80.87 E-value=2.4 Score=42.67 Aligned_cols=93 Identities=20% Similarity=0.178 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd-----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-. .+........+.||+.. .++---.+|+|....+....++-.
T Consensus 122 ~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~---------~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 122 VTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG---------FAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS---------EEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC---------eEEEECCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999987632 22345566778999931 122223466665554444444443
Q ss_pred cCCCCcEEEEEe---------------ecccceeE-EEEEEecc
Q 012506 413 RGRDCRFGVISM---------------CIGTGMGA-AAVFERGD 440 (462)
Q Consensus 413 ~~~~~~~gl~~~---------------~~G~G~g~-A~v~~~~~ 440 (462)
.+ ..++.|+.. |.-.|-|+ |+||++.+
T Consensus 193 ~g-~~~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~ 235 (392)
T 3led_A 193 GG-SVDAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERAD 235 (392)
T ss_dssp TT-SCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGG
T ss_pred CC-CCCEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecC
Confidence 32 235555532 22345554 66777654
No 98
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=80.84 E-value=2.8 Score=41.84 Aligned_cols=43 Identities=21% Similarity=0.130 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+...
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 149 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPS 149 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCC
Confidence 47899999999999999998876432 33445677889999653
No 99
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=80.74 E-value=2.9 Score=42.28 Aligned_cols=43 Identities=21% Similarity=0.221 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+...
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 47899999999999999999876433 34456677889999653
No 100
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=80.71 E-value=2.8 Score=42.13 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.. +.....+..+.||+...
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 158 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPS 158 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCC
Confidence 47899999999999999998876433 33446677888999653
No 101
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=80.41 E-value=3.6 Score=39.52 Aligned_cols=80 Identities=16% Similarity=0.143 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~~I 152 (462)
...++++++|+++|++++|||.++.-.. +......+...+|+|.. .... -|..++|...+|..+ +
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~-~~~~~~~~~Gn~~~As~~~~L~~~---~ 288 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQA------NLRIISATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALDEA---V 288 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCS------CHHHHHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHH-HhHhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4567899999999999999998876321 22334467778999643 2221 255667777666554 5
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|.. |.+|+.|+-.
T Consensus 289 ~~~~~~~G~~vll~~~G~ 306 (317)
T 1hnj_A 289 RDGRIKPGQLVLLEAFGG 306 (317)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEch
Confidence 55544 7888887654
No 102
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=80.34 E-value=3 Score=41.75 Aligned_cols=78 Identities=18% Similarity=0.136 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+.+..... +-.-.+|+|....+....++-..
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~------~~~~~~C~~~~~al~~A~~~i~s 174 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRT------MLHLNGCFAGCAALRLAKDLAEN 174 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEE------EEECCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCccee------eEECchhHHHHHHHHHHHHHHhc
Confidence 47899999999999999999876433 234456777899997642100 11123566555544444444433
Q ss_pred CCCCcEEEE
Q 012506 414 GRDCRFGVI 422 (462)
Q Consensus 414 ~~~~~~gl~ 422 (462)
+. .++.|+
T Consensus 175 g~-~~~vLv 182 (387)
T 3oit_A 175 SR-GARVLV 182 (387)
T ss_dssp ST-TCEEEE
T ss_pred CC-CCEEEE
Confidence 32 255554
No 103
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=80.33 E-value=4.2 Score=40.46 Aligned_cols=76 Identities=21% Similarity=0.288 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchH-HHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTT-GARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gat-G~~~~~~~~~qL 410 (462)
..|++++|+++|++++|||.+-.-.. +.....+..+.||+... .+.+ .. .+|+ |+..+..+...+
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v-------~~-~aCss~~~Al~~A~~~i 160 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPI-------AQ-LGCAAGGAAINRAHDFC 160 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEE-------CS-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEc-------cC-CcCHHHHHHHHHHHHHH
Confidence 47889999999999999999876332 33445677788999752 1222 11 2444 444455555556
Q ss_pred HhcCCCCcEEEEE
Q 012506 411 KRRGRDCRFGVIS 423 (462)
Q Consensus 411 ~~~~~~~~~gl~~ 423 (462)
+.... ++.|+.
T Consensus 161 ~~g~~--~~vLv~ 171 (382)
T 1u0m_A 161 TAYPE--ANALIV 171 (382)
T ss_dssp HHSTT--CEEEEE
T ss_pred HcCCC--CEEEEE
Confidence 55432 455543
No 104
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=80.24 E-value=4.6 Score=40.35 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-..+ ..........||+++.... ..+ +...++|+..+..+...++.
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~-----~~v-~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS-----YTV-NKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE-----EEc-cccchHHHHHHHHHHHHHhC
Confidence 479999999999999999988764321 2234556678999642111 111 33455666677777777775
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. ++..|+.
T Consensus 108 G~--~~~vlv~ 116 (395)
T 4e1l_A 108 GE--NDVVIAG 116 (395)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEE
Confidence 43 4777764
No 105
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=78.90 E-value=4.3 Score=39.53 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
+...++++++|+++|++++|||.++.=+. +...-..+...+|+|...-..++ |..++|-..+|..+ +
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~------~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~ 304 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQA------NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---V 304 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---H
Confidence 55667889999999999999998876221 23345677788999854332332 44555555555544 4
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|+. |.+|.+|+-.
T Consensus 305 ~~g~~~~Gd~vll~~~G~ 322 (333)
T 4dfe_A 305 RDGRIKRGQNVLIEGVGG 322 (333)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HcCCCCCCCEEEEEEEch
Confidence 55543 6788877543
No 106
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=78.89 E-value=3.4 Score=39.48 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=57.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-.. +........+.||+...+. ..+ +...++|...+..+...++.
T Consensus 55 ~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~~C~s~~~al~~A~~~i~~ 127 (309)
T 2ebd_A 55 TQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYA------FDI-SAACSGFIYALDIADSFIKS 127 (309)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEE------EEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceE------Eec-CccchHHHHHHHHHHHHHHC
Confidence 46889999999999999998776422 2224566778899975211 112 12234555556666666664
Q ss_pred cCCCCcEEEEEee---------------cccceeE-EEEEEeccc
Q 012506 413 RGRDCRFGVISMC---------------IGTGMGA-AAVFERGDC 441 (462)
Q Consensus 413 ~~~~~~~gl~~~~---------------~G~G~g~-A~v~~~~~~ 441 (462)
.. ++..|+... .-.|-|+ |+||++++.
T Consensus 128 g~--~~~vlv~g~e~~s~~~~~~~~~~~~~~gdGaaA~vL~~~~~ 170 (309)
T 2ebd_A 128 GK--AKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSED 170 (309)
T ss_dssp TS--CSEEEEEEEEEGGGTCCTTCTTTTTTBCEEEEEEEEEECSS
T ss_pred CC--CCEEEEEEecccccccCccchhhccccccccEEEEEEecCC
Confidence 43 356555432 1234454 567777654
No 107
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=78.72 E-value=2.8 Score=42.38 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||.+-+-.+ +.....+..+.||+...
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 176 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPS 176 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCc
Confidence 47889999999999999998875433 23445677788999653
No 108
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=78.48 E-value=4.1 Score=40.14 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHH--
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAA-- 150 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~-- 150 (462)
+...++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..+ -|.+++|-..++..+..
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g 317 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLFHQA------NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDR 317 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhC
Confidence 45567789999999999999999877322 2344567788899985433332 25666777777766543
Q ss_pred HHHccCCCEEEEEeecC
Q 012506 151 AIKAGFYDIGIGAGLES 167 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ 167 (462)
.++.| |.+|.+|+-.
T Consensus 318 ~~~~G--d~vll~~fG~ 332 (354)
T 4efi_A 318 LKEET--LQLGMFGFGV 332 (354)
T ss_dssp HHHSC--EEEEEEEEET
T ss_pred CCCCC--CEEEEEEEch
Confidence 46666 6788877655
No 109
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=78.40 E-value=3.3 Score=41.69 Aligned_cols=43 Identities=21% Similarity=0.255 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||.+-.-.+ +.....+..+.||+...
T Consensus 120 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (406)
T 2d3m_A 120 TEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHAN 166 (406)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCC
Confidence 47889999999999999999876433 23455677888999653
No 110
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=78.31 E-value=5.9 Score=39.62 Aligned_cols=78 Identities=19% Similarity=0.156 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-..+ ..........||+++... ...+ +...++|+..+..+...++.
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-----~~~v-~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP-----AMTI-NIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-----EEEE-CCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce-----EEEe-ccccHHHHHHHHHHHHHHhc
Confidence 578999999999999999998774322 234456678899974211 1112 23345666677777777775
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. ++..|+.
T Consensus 110 G~--~~~vLv~ 118 (396)
T 4dd5_A 110 GD--ADIMLVG 118 (396)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEE
Confidence 43 3777763
No 111
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=78.20 E-value=9.1 Score=38.60 Aligned_cols=78 Identities=10% Similarity=0.153 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++|++++|||.+-+-..+ ..........||++.. +-...+ +...++|+..+..+...++.
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~-----~p~~~v-~~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPET-----VPLSTV-NRQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTT-----SCEEEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCC-----ceEEEe-CCCCHHHHHHHHHHHHHHHC
Confidence 468899999999999999977664322 2333444567898421 111112 33345677777777777775
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. ++..|+.
T Consensus 134 G~--~d~vLv~ 142 (418)
T 2iik_A 134 GS--YDIGMAC 142 (418)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEe
Confidence 43 3677664
No 112
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=77.75 E-value=4.7 Score=39.17 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
+.+.++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..++ |.+++|-..++..+ +
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~ 294 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPHQA------NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---I 294 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---H
Confidence 34567788999999999999998876322 23345677889999854333332 44555555555544 4
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|+. |.++.+|+-.
T Consensus 295 ~~g~~~~Gd~vll~~~G~ 312 (323)
T 3il3_A 295 RDGRIQRGQLLLLEAFGG 312 (323)
T ss_dssp HTTSSCTTCEEEEEEEET
T ss_pred HcCCCCCCCEEEEEEEeh
Confidence 55543 6788877643
No 113
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=77.03 E-value=4 Score=40.76 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcce-----E-Ee-cCCCchHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV-----R-TV-NRQCSSGLQAVADVA 149 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~-----~-~v-~~~CsSgl~Ai~~Aa 149 (462)
+-+.++++++|+++|++++|||.++.-.. +...-..+...+|+|...-. . .. |..++|-..+| .
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~H~~------~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~ 357 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAIHPG------GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E 357 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEECCS------CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEECCC------cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---H
Confidence 35567889999999999999998877221 22344567778999754321 1 12 33333333333 3
Q ss_pred HHHHccCC----CEEEEEeecC
Q 012506 150 AAIKAGFY----DIGIGAGLES 167 (462)
Q Consensus 150 ~~I~sG~~----d~vLv~G~E~ 167 (462)
.+++.|+. |.+|+.|+-.
T Consensus 358 ~~~~~g~~~~~Gd~vll~~~G~ 379 (393)
T 1ted_A 358 TMVQQAESAKAISTGVAFAFGP 379 (393)
T ss_dssp HHHHSCSSSSSSEEEEEEEEET
T ss_pred HHHhcCccCCCCCeEEEEEecc
Confidence 45677754 7888887754
No 114
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=77.02 E-value=2.9 Score=42.98 Aligned_cols=81 Identities=9% Similarity=0.075 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++.+- +.+.+...+..+.||+...+ + ..++---.+|+|...-.....++-.
T Consensus 59 ~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~-~----~~a~Dv~~ACsGg~~AL~~A~~~I~ 133 (460)
T 2v4w_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNT-D----IEGIDTTNACYGGTASLFNAANWME 133 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCC-C----CBCCEEESGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCC-C----cEEEEecchhHHHHHHHHHHHHHHH
Confidence 578999999999999999999864 23455667778899984311 1 1112223467666655555555544
Q ss_pred cCC-CCcEEEEE
Q 012506 413 RGR-DCRFGVIS 423 (462)
Q Consensus 413 ~~~-~~~~gl~~ 423 (462)
.+. +.+++|+.
T Consensus 134 sg~~~~~~aLVV 145 (460)
T 2v4w_A 134 SSSWDGRYAMVV 145 (460)
T ss_dssp STTCCSCEEEEE
T ss_pred hCCccCCEEEEE
Confidence 332 12566654
No 115
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=76.94 E-value=5 Score=39.63 Aligned_cols=42 Identities=21% Similarity=0.087 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-+-. .+........+.||+..
T Consensus 100 ~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~ 145 (374)
T 2h84_A 100 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNK 145 (374)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCC
Confidence 4788999999999999999987532 23334566778899965
No 116
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=76.89 E-value=5.2 Score=38.46 Aligned_cols=76 Identities=9% Similarity=0.030 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-.. +........+.||+..+.+. + +...++|+..+..+...++.
T Consensus 55 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~~-------v-~~aCas~~~al~~A~~~i~~ 126 (322)
T 1ub7_A 55 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKAFAYD-------L-LAGCPGWIYALAQAHALVEA 126 (322)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCCEEEE-------E-ECSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCEEEe-------e-CccchHHHHHHHHHHHHHHc
Confidence 46889999999999999997664322 22245667788998211111 2 11234455556666666665
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
... +..|+.
T Consensus 127 g~~--~~vlv~ 135 (322)
T 1ub7_A 127 GLA--QKVLAV 135 (322)
T ss_dssp TSC--SEEEEE
T ss_pred CCC--CEEEEE
Confidence 433 566654
No 117
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=76.36 E-value=2.5 Score=39.26 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc----cHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~----~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
...+.+..+++++|+++|++++|||.|.++.-.+.+. +. ..++-++..+ +.|.+.|+ .+.++...
T Consensus 33 ~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsft-glRig~~~ak~la~~~----~~Pl~~V~-----~l~a~a~~ 101 (231)
T 2gel_A 33 EHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFT-GVRIGIGIAQGLALGA----NLPMIGVS-----TLATMAQG 101 (231)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHH-HHHHHHHHHHHHHHTT----TCCEEEEC-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhH-hHHHHHHHHHHHHHHc----CCCEEEec-----cHHHHHHH
Confidence 3456678999999999999999999999986543332 22 2233333333 45777774 45554433
No 118
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=76.23 E-value=5.1 Score=44.92 Aligned_cols=84 Identities=10% Similarity=-0.017 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-------ecCCCchHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-------VNRQCSSGLQAVADVAA 150 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-------v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.++++++|+++|++++|||.++.= +. +...-..+...+|+|...-..+ -|+.++|-..++..+..
T Consensus 865 ~~~~~~~~al~~agl~~~did~~~~H---q~---~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~ 938 (979)
T 3tsy_A 865 NVEKCLTQAFDPLGISDWNSLFWIAH---PG---GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRK 938 (979)
T ss_dssp HHHHHHHHHHGGGTCCCGGGSEEEEC---CS---CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcccceEEEC---CC---ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHh
Confidence 35778899999999999999997652 11 2334556777899986432222 47778888889988888
Q ss_pred HHHccCC-------CEEEEEeecC
Q 012506 151 AIKAGFY-------DIGIGAGLES 167 (462)
Q Consensus 151 ~I~sG~~-------d~vLv~G~E~ 167 (462)
.++.|+. |.+|.+|+-.
T Consensus 939 ~~~~G~~v~~g~~~~~~ll~~~G~ 962 (979)
T 3tsy_A 939 KSLKGERATTGEGLDWGVLFGFGP 962 (979)
T ss_dssp HHHHTTCSBTTTTCSEEEEEEECG
T ss_pred hhcccccccCCCCcceeEEEEeCC
Confidence 8888853 5567766543
No 119
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=74.25 E-value=9.8 Score=38.88 Aligned_cols=80 Identities=9% Similarity=0.080 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++.+- +.+.+...+..+.||+...+ + ..+|---.+|+|...-.....++-.
T Consensus 59 ~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~---~--~~a~D~~~aC~g~~~al~~A~~~i~ 133 (460)
T 2wya_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNT---D--IEGIDTTNACYGGTASLFNAANWME 133 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCC---C--CBCCEEESGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCC---C--eeEechhhhhhhHHHHHHHHHHHHH
Confidence 579999999999999999998863 45666677777788764311 1 1112223356666554444444443
Q ss_pred cCC-CCcEEEE
Q 012506 413 RGR-DCRFGVI 422 (462)
Q Consensus 413 ~~~-~~~~gl~ 422 (462)
.+. +..++++
T Consensus 134 ~g~~~~~lvvv 144 (460)
T 2wya_A 134 SSSWDGRYAMV 144 (460)
T ss_dssp STTCCSCEEEE
T ss_pred hccccceEEEE
Confidence 332 2244554
No 120
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=74.19 E-value=2.3 Score=39.19 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc----cHHHHHHHHcCCCCCcceEEec
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~----~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
.-.+.+...++++|+++++++++||.|.++.-.+.+. |- ..++-++..++ .|.+.|+
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfT-GlRiG~~~Ak~La~~~~----iPl~gVs 104 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLT-GLRVGIATVVGLVSPYD----IPVAPLN 104 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHH-HHHHHHHHHHHHHGGGT----CCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchH-hHHHHHHHHHHHHHHcC----CCEEEeC
Confidence 4567788899999999999999999999986443332 22 23444444444 4778774
No 121
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=73.91 E-value=9 Score=39.08 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CCHHHHHHHHHHcCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGL 377 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd-----afa~~~~~~~e~LGl 377 (462)
..|++++|+++|++++|||++.+-- .+.....+..+.||+
T Consensus 57 ~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl 101 (450)
T 2f82_A 57 FNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEK 101 (450)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHT
T ss_pred HHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCC
Confidence 5789999999999999999998642 244556677788888
No 122
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=73.76 E-value=6.3 Score=38.89 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC------HHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF------ASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf------a~~~~~~~e~LGl~ 378 (462)
..|++++|+++|++++|||++-+-.+. .....+..+.||+.
T Consensus 59 ~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~ 105 (357)
T 3s3l_A 59 ARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR 105 (357)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC
Confidence 578999999999999999998764331 12355667889984
No 123
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=73.31 E-value=2.4 Score=38.94 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCcc----ccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR----ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~----~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
...+.+...++++|+++|+++++||.|.++.-.+.+. + ...++-++..+++ |.+.| +.+.++...
T Consensus 34 ~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfT-glRig~~~AkgLa~~~~i----Pl~gV-----stL~a~a~~ 102 (213)
T 3r6m_A 34 DHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFT-GVRIGIGIAQGLAFGAEL----PMIGV-----STLAAMAQA 102 (213)
T ss_dssp CCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHH-HHHHHHHHHHHHHHHTTC----CEEEE-----EHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchh-hHHHHHHHHHHHHHHhCC----CEEEE-----cCHHHHHHh
Confidence 3456667899999999999999999999987544332 2 2244555555555 77777 445555443
No 124
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=72.88 E-value=8.2 Score=38.50 Aligned_cols=78 Identities=13% Similarity=0.161 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-... ..........||++...... .+ +...++|+..+..+...++.
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~-----~v-~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGY-----TI-QRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEE-----EE-ECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEE-----Ee-cCcchHHHHHHHHHHHHHhC
Confidence 478999999999999999998764322 12345566778986421111 01 23345666667777777765
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. +++.|+.
T Consensus 108 G~--~~~vlv~ 116 (394)
T 3ss6_A 108 GV--SEVVVAG 116 (394)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEE
Confidence 43 3777763
No 125
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=68.52 E-value=19 Score=36.55 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++||+++|||.+-+-..+. .....+...||++.... ...+ ....++|+..+..+...++
T Consensus 60 ~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-----~~~v-~~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 60 APVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA-----VRTV-NRQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC-----EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce-----EEEe-CCcCHHHHHHHHHHHHHHH
Confidence 4688999999999999999776643321 23445567799853211 1111 2334577777778877777
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... ++..|+.
T Consensus 134 sG~--~d~vLvg 143 (442)
T 2wu9_A 134 AGF--YDIGIGA 143 (442)
T ss_dssp TTS--CSEEEEE
T ss_pred CCC--CCEEEEE
Confidence 643 3676664
No 126
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=68.38 E-value=18 Score=37.28 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGL 377 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl 377 (462)
..|++++|+++|++++|||++.+.-+ +.....+..+.|++
T Consensus 78 ~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~ 122 (478)
T 2p8u_A 78 MTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEE 122 (478)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhh
Confidence 57999999999999999999987532 33445555544443
No 127
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=65.35 E-value=18 Score=35.99 Aligned_cols=76 Identities=7% Similarity=-0.018 Sum_probs=49.1
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCC------CHHHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSA-GLQLDDIDLFEINEA------FASQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 338 ~~Ai~~aL~~A-Gl~~~DID~~eihda------fa~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
..+++++|+++ ||+++|||.+-+-.. ...........+|++.. | +++ +...++|+..+..+..
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v--------~~aCss~l~Al~~A~~ 103 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTV--------NRLCGSSMQALHDAAR 103 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEE--------ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEe--------cCcchHHHHHHHHHHH
Confidence 47899999999 999999998776321 22334455667898632 1 112 2334566666777777
Q ss_pred HHHhcCCCCcEEEEE
Q 012506 409 EMKRRGRDCRFGVIS 423 (462)
Q Consensus 409 qL~~~~~~~~~gl~~ 423 (462)
.++... ++..|+.
T Consensus 104 ~I~sG~--~d~vLv~ 116 (387)
T 3goa_A 104 MIMTGD--AQVCLVG 116 (387)
T ss_dssp HHHTTS--CSEEEEE
T ss_pred HHhCCC--CCEEEEE
Confidence 776543 4777764
No 128
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=65.12 E-value=6.3 Score=39.49 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=57.9
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc--cccHHHHHHHHcCCCC-C
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ--RASECRMAAFYAGFPE-T 128 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~--~~~~a~~~a~~~Glp~-~ 128 (462)
++|.|.+.+--++.. ..++. ..+-...+++++|+++|++++|||.+.. .+.+.. .+.....+...+|.+. .
T Consensus 253 a~i~g~~~~~d~~~~--~~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~---Hgtgt~~gD~~E~~al~~~~g~~~~~ 326 (408)
T 1j3n_A 253 AELVGFGRSADAHHI--TEPHP-EGKGAALAMARALKDAGIAPEQVGYINA---HGTSTPVGDRAEVLAIKRVFGDHAKR 326 (408)
T ss_dssp EEEEEEEEEECCSCS--SCCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC---CCCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEEcCCCCCC--CCCCC-CHHHHHHHHHHHHHHcCCCHHHcCEEEE---eCCcCcccCHHHHHHHHHHhcCcCCC
Confidence 567777665433211 01111 1244577899999999999999998764 222110 1122344444555421 1
Q ss_pred cceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
++... -+..++||...+..+...++.|.
T Consensus 327 ~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ 359 (408)
T 1j3n_A 327 LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGV 359 (408)
T ss_dssp CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ceEECchhhhccCHHHHHHHHHHHHHHHHhcCC
Confidence 22221 24557889999999999999873
No 129
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=64.47 E-value=12 Score=37.27 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA------FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda------fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..+++++|+++|++++|||.+-+-.. ...........||++.... ...+ +...++|+..+..+...++
T Consensus 31 ~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p-----~~~v-~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 31 AHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-----GCTV-NRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-----EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCcc-----Eeec-cccchHHHHHHHHHHHHHH
Confidence 46889999999999999997765321 2334556677899953211 1112 2334567777777777777
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... ++..|+.
T Consensus 105 ~G~--~d~vLv~ 114 (401)
T 1ulq_A 105 AGE--GKVYIGS 114 (401)
T ss_dssp TTS--CSEEEEE
T ss_pred CCC--CCEEEEE
Confidence 543 3666663
No 130
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=63.87 E-value=6.5 Score=39.59 Aligned_cols=76 Identities=9% Similarity=0.021 Sum_probs=45.8
Q ss_pred HHHHHHHHHH-cCCCCCCccEEEecCCCH------HHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHHHH
Q 012506 338 AVAIPAAVKS-AGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 338 ~~Ai~~aL~~-AGl~~~DID~~eihdafa------~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
..|++++|++ +||+++|||.+-+-.... .....+...+|++.. + +++ +...++|+..+..+..
T Consensus 37 ~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v--------~~~Css~~~Al~~A~~ 108 (407)
T 3svk_A 37 VGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQL--------NRFCASGLEAVNTAAQ 108 (407)
T ss_dssp HHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEE--------C---CBSCCHHHHHHH
T ss_pred HHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEe--------cCcChhHHHHHHHHHH
Confidence 5789999999 999999999887643321 224456678999543 1 111 2223344445666666
Q ss_pred HHHhcCCCCcEEEEE
Q 012506 409 EMKRRGRDCRFGVIS 423 (462)
Q Consensus 409 qL~~~~~~~~~gl~~ 423 (462)
.++... ++..|+.
T Consensus 109 ~I~sG~--~d~vLv~ 121 (407)
T 3svk_A 109 KVRSGW--DDLVLAG 121 (407)
T ss_dssp HHHHTS--CCEEEEE
T ss_pred HHHcCC--CCEEEEE
Confidence 666543 3676663
No 131
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=63.87 E-value=7.6 Score=39.21 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=59.3
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCC-Cc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TV 129 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~-~~ 129 (462)
++|.|.+.+--++.. ...+. ..+-...+++++|+++|++++|||.+.. |+.+... .......+...+|.+. .+
T Consensus 270 a~i~g~~~~~dg~~~--~~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~--d~~e~~a~~~~~g~~~~~~ 344 (427)
T 3ho9_A 270 AELVGFGMSSDAYHM--TSPPE-NGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAG--DKAEAQAVKTIFGEAASRV 344 (427)
T ss_dssp EEEEEEEEEECCSBT--TBCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH--HHHHHHHHHHHHGGGGGTS
T ss_pred EEEEEEeecCCCCCc--CCCCC-CHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCc--CHHHHHHHHHHhcccCCCe
Confidence 567777654332210 01111 2344577899999999999999998875 2221111 1223444555566532 12
Q ss_pred ceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
++.. -+..++||...+..++..++.|.
T Consensus 345 ~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ 376 (427)
T 3ho9_A 345 LVSSTKSMTGHLLGAAGAVESIYSILALRDQA 376 (427)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred EEecchHhhccCHHHHHHHHHHHHHHHHhcCC
Confidence 2221 24457899999999999998874
No 132
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=61.27 E-value=20 Score=36.16 Aligned_cols=99 Identities=11% Similarity=0.072 Sum_probs=57.0
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCC-c
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPET-V 129 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~-~ 129 (462)
++|.|.+.+--++.. ..++. ..+-...+++++|+++|++++|||.+.. |+.+ .. .......+...+|.+.. .
T Consensus 271 a~i~g~~~~~dg~~~--~~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT--~~-d~~e~~al~~~~g~~~~~~ 344 (428)
T 3kzu_A 271 AEVIGYGMSGDAFHI--TAPTE-SGEGAQRCMVAALKRAGIVPDEIDYINAHGTST--MA-DTIELGAVERVVGEAAAKI 344 (428)
T ss_dssp EEEEEEEEEECCSCS--SSCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS--TT-HHHHHHHHHHHHGGGGGGC
T ss_pred EEEEEEEEccCCCCC--CCCCC-CHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc--hh-hHHHHHHHHHHhccCCCce
Confidence 567777654332210 01111 2234578899999999999999998864 3222 11 22233344445665321 1
Q ss_pred ceEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+... -...+++|...+..+...++.|.
T Consensus 345 ~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ 376 (428)
T 3kzu_A 345 SMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNI 376 (428)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eeCCchhhhCCCchhhHHHHHHHHHHHhccCc
Confidence 2111 12346788888888999998874
No 133
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=60.15 E-value=20 Score=35.71 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++|++++|||.+.+-..+ ..........||++... -...+ ....++|+..+..+...++.
T Consensus 35 ~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~-----p~~~v-~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 35 STVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSV-----PAWSC-QMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-----CEEEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCc-----cEEEe-cCcChhHHHHHHHHHHHHHC
Confidence 468899999999999999987664322 12344556778985221 11112 23356777778888888876
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
... +..|+.
T Consensus 109 G~~--d~vlag 117 (397)
T 1wl4_A 109 GDS--SIVVAG 117 (397)
T ss_dssp TSC--SEEEEE
T ss_pred CCC--CEEEEE
Confidence 543 666663
No 134
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=59.09 E-value=19 Score=36.06 Aligned_cols=101 Identities=12% Similarity=0.080 Sum_probs=57.8
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC-Ccc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~-~~p 130 (462)
.+|.|.+.+--++.. ...+.. .+-..++++++|+++|++++|||.+..--. +.....+.....+...+|.+. ..|
T Consensus 261 a~I~g~~~~~dg~~~--~~p~~~-g~~~~~ai~~al~~agl~~~dId~ve~Hgt-gt~~gD~~E~~al~~~f~~~~~~~~ 336 (424)
T 1tqy_A 261 AEISGYATRCNAYHM--TGLKAD-GREMAETIRVALDESRTDATDIDYINAHGS-GTRQNDRHETAAYKRALGEHARRTP 336 (424)
T ss_dssp EEEEEEEEEECSSCS--SCCCTT-CHHHHHHHHHHHHHHTCCGGGCCEEECCCC-CCHHHHHHHHHHHHHHTGGGGGGSC
T ss_pred EEEeeeEEcCCCCCC--CCCCCC-HHHHHHHHHHHHHHcCCCHHHCCEEEecCc-cCcCcCHHHHHHHHHHhcccCCCCe
Confidence 567777654433211 011111 144578899999999999999998765211 110001223334444555321 233
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -...+++|...+..++..++.|.
T Consensus 337 v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ 367 (424)
T 1tqy_A 337 VSSIKSMVGHSLGAIGSLEIAACVLALEHGV 367 (424)
T ss_dssp EECTHHHHCBCTTTHHHHHHHHHHHHHHHCE
T ss_pred eeccccccccChhhhHHHHHHHHHHHHHcCC
Confidence 322 24456789999999999998873
No 135
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=58.18 E-value=16 Score=36.63 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=58.4
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
.+|.|.+.+--++. +...+ .+-...+++++|+++|++++|||.|.. |+.+..+ .+.....+...+|- ..|
T Consensus 259 a~i~g~~~~~dg~~----~~~p~-~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~--D~~E~~al~~~~~~--~~~ 329 (412)
T 4ewg_A 259 AEIVGFGCNSDGAH----MTQPT-ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG--DVAESQATARTFGE--RMP 329 (412)
T ss_dssp EEEEEEEEEECSSC----SSSCC-HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH--HHHHHHHHHHHHCT--TCE
T ss_pred EEEEEEEEcCCCCC----CCCCC-HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc--cHHHHHHHHHHcCC--CCe
Confidence 56777776543321 12223 455678999999999999999998864 2211110 12334444445553 233
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -....+||...+..+...++.|.
T Consensus 330 v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ 360 (412)
T 4ewg_A 330 ISSLKSYVGHTLGACGALEAWWTIEMMKRNW 360 (412)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eeCccccccccHHHHHHHHHHHHHHHHhcCC
Confidence 332 23456788888888999998874
No 136
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=57.62 E-value=39 Score=35.08 Aligned_cols=83 Identities=4% Similarity=-0.032 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc--ceEE-------ecCCCchHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV--PVRT-------VNRQCSSGLQAVAD 147 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~--p~~~-------v~~~CsSgl~Ai~~ 147 (462)
.-...+++++|+++|++++|||.+=+=-. .+...-.....+|++... |.+. -....++|...|..
T Consensus 317 ~~~~~a~~~al~~agl~~~did~~E~~dA------F~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~ 390 (520)
T 4egv_A 317 PASVTAVNEALRVAGIGLDDVAAFDLYSC------FPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAE 390 (520)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEECCS------SSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHCCEEEEeCC------cHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHH
Confidence 34567899999999999999997765211 233344555678884321 2211 11346789999999
Q ss_pred HHHHHHccCCCEEEEEee
Q 012506 148 VAAAIKAGFYDIGIGAGL 165 (462)
Q Consensus 148 Aa~~I~sG~~d~vLv~G~ 165 (462)
....++.+..+..|+.+.
T Consensus 391 ~v~~lr~~~~~~~L~~~~ 408 (520)
T 4egv_A 391 AVNEMRDKPGQFALVGAN 408 (520)
T ss_dssp HHHHHHHSTTCEEEEEEE
T ss_pred HHHHHhcCCCCceEEeCC
Confidence 999999999999998653
No 137
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=57.56 E-value=44 Score=33.61 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCcc----EEEecCCCH-------------------------------HHHHHHHHHcCCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDID----LFEINEAFA-------------------------------SQFVYCRNKLGLDPEKI 382 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID----~~eihdafa-------------------------------~~~~~~~e~LGl~~~~v 382 (462)
..++.++|++||++++||| -+-+--.+. ...-.+...||+..+-+
T Consensus 103 l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 182 (437)
T 2gqd_A 103 IVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNG 182 (437)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEE
T ss_pred HHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceE
Confidence 4688999999999999998 554432211 12334455677754322
Q ss_pred CCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 383 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 383 n~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
.+ ...-++|+..+..+...|+... ++..|+.
T Consensus 183 ~v--------~~aCsS~l~Al~~A~~~I~~G~--~d~aLvg 213 (437)
T 2gqd_A 183 AT--------VTACATGTNSIGEAFKIVQRGD--ADAMITG 213 (437)
T ss_dssp CB--------CCGGGHHHHHHHHHHHHHHTTS--CSEEEEE
T ss_pred Ee--------cCCccHHHHHHHHHHHHHHcCC--CCEEEEe
Confidence 32 2234667777778887777643 3666654
No 138
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=57.24 E-value=17 Score=36.42 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=57.0
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
++|.|.+.+--++. +...++ -...+++++|+++|++++|||.+.. |+.+.. . .+.....+...+|-. ..+
T Consensus 260 a~I~g~~~~~dg~~----~~~p~~--~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~-~-D~~E~~al~~~~g~~-~~~ 330 (415)
T 1tqy_B 260 GELAGCASTFDPAP----GSGRPA--GLERAIRLALNDAGTGPEDVDVVFADGAGVPE-L-DAAEARAIGRVFGRE-GVP 330 (415)
T ss_dssp EEEEEEEEEECCCT----TCCCCC--SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHH-H-HHHHHHHHHHHHCTT-CSE
T ss_pred EEEEEEEEccCCCC----CCCCCH--HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcC-c-CHHHHHHHHHHhCCC-Cce
Confidence 57888776543321 111122 4567899999999999999998765 111110 0 123344444455541 223
Q ss_pred eEE-----ecCCCchHHHHHHHHHHHHHccC
Q 012506 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 131 ~~~-----v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
+.. -...+++|...+..++..++.|.
T Consensus 331 v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ 361 (415)
T 1tqy_B 331 VTVPKTTTGRLYSGGGPLDVVTALMSLREGV 361 (415)
T ss_dssp EECGGGGTCBCGGGHHHHHHHHHHHHHHHTS
T ss_pred EeccchhhccChHHHHHHHHHHHHHHHhcCC
Confidence 322 13346788889999999998875
No 139
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=56.61 E-value=50 Score=32.91 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCCCCCcc----EEEecCCCH-------------------------------HHHHHHHHHcCCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDID----LFEINEAFA-------------------------------SQFVYCRNKLGLDPEKI 382 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID----~~eihdafa-------------------------------~~~~~~~e~LGl~~~~v 382 (462)
..++.++|++||++++||| -+-+...+. ...-.+...||+..+-+
T Consensus 82 l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 161 (416)
T 1e5m_A 82 VCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNN 161 (416)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCcee
Confidence 4688999999999999998 333322211 12334445677754322
Q ss_pred CCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 383 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 383 n~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
.+ ...-++|+..+..+...|+... ++..|+.
T Consensus 162 ~v--------~~aCsS~l~Al~~A~~~I~~G~--~d~~Lvg 192 (416)
T 1e5m_A 162 CT--------VTACAAGSNAIGDAFRLVQNGY--AKAMICG 192 (416)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTS--CSEEEEE
T ss_pred Cc--------cchhHHHHHHHHHHHHHHHcCC--CCEEEEe
Confidence 32 2234667777888887777643 3555553
No 140
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=54.94 E-value=17 Score=36.17 Aligned_cols=78 Identities=18% Similarity=0.246 Sum_probs=49.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++|++++|||.+.+--.+ ......+...+||.+.... ..+ +...+||+..+..+...++.
T Consensus 32 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~-----~~v-~~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 32 ATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA-----WGM-NQLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE-----EEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceE-----EEe-cccchHHHHHHHHHHHHHHC
Confidence 468899999999999999987653222 1234556678998642111 111 23356777778888888876
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
... +..|+.
T Consensus 106 G~~--d~vlvg 114 (392)
T 2vu1_A 106 GDA--SIIVAG 114 (392)
T ss_dssp TSC--SCEEEE
T ss_pred CCC--CEEEEE
Confidence 433 566553
No 141
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=53.19 E-value=27 Score=34.55 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++|++++|||.+.+-... ..........||++.... ...+ ....++|+..+..+...++.
T Consensus 37 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p-----~~~v-~~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 37 SIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP-----CTTI-NKVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC-----EEEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce-----EEEe-cccccHHHHHHHHHHHHHHC
Confidence 468899999999999999987653211 122344556788853211 1112 23346777778888888776
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. ++..|+.
T Consensus 111 G~--~d~vlvg 119 (395)
T 2ib8_A 111 GH--QDVMVAG 119 (395)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEE
Confidence 43 3676664
No 142
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=52.57 E-value=24 Score=35.74 Aligned_cols=76 Identities=16% Similarity=0.131 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc--cccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ--RASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAA 150 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~--~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~ 150 (462)
-...+++++|+++|++++|||.+..= ..+.. .......+...+|-....++.. -...+++|...+..++.
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~H---gtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~ 385 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAH---ATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSIL 385 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECC---CCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEec---CCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHH
Confidence 45778999999999999999988652 11110 1122333444455422233221 23456788888999999
Q ss_pred HHHccC
Q 012506 151 AIKAGF 156 (462)
Q Consensus 151 ~I~sG~ 156 (462)
.++.|.
T Consensus 386 ~l~~~~ 391 (451)
T 4ddo_A 386 ALRDGV 391 (451)
T ss_dssp HHHHTE
T ss_pred HHhcCC
Confidence 998874
No 143
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=51.94 E-value=21 Score=35.39 Aligned_cols=78 Identities=8% Similarity=-0.020 Sum_probs=49.6
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCCC------HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSA-GLQLDDIDLFEINEAF------ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~A-Gl~~~DID~~eihdaf------a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++ |++++|||.+-+-..+ ......+...||+++.. -...+ ....++|+..+..+...+
T Consensus 35 ~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~-----p~~~v-~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 35 AHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTS-----AAQTV-SRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTS-----EEEEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCc-----cEEEE-cccchhHHHHHHHHHHHH
Confidence 46889999999 9999999877663221 22344556678885321 11112 334567777788888777
Q ss_pred HhcCCCCcEEEEE
Q 012506 411 KRRGRDCRFGVIS 423 (462)
Q Consensus 411 ~~~~~~~~~gl~~ 423 (462)
+...- +..|+.
T Consensus 109 ~~G~~--d~vlvg 119 (390)
T 1wdk_C 109 MTGNG--DVFVVG 119 (390)
T ss_dssp HTTSC--SEEEEE
T ss_pred HcCCC--CEEEEe
Confidence 76433 666663
No 144
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=51.30 E-value=37 Score=33.69 Aligned_cols=76 Identities=11% Similarity=0.068 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcC----CCCCCccEEEecCC-----CHHHHHHHHHHcCCCCC-C-CCCCCCccccCCccchHHHHHHHHH
Q 012506 338 AVAIPAAVKSAG----LQLDDIDLFEINEA-----FASQFVYCRNKLGLDPE-K-INVNGGALAIGHPLGTTGARCVATL 406 (462)
Q Consensus 338 ~~Ai~~aL~~AG----l~~~DID~~eihda-----fa~~~~~~~e~LGl~~~-~-vn~~GG~~a~Ghp~gatG~~~~~~~ 406 (462)
..+++++|+++| |+++|||.+-+-.. ...........||++.. | +.+ +...++|+..+..+
T Consensus 40 ~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v--------~~aCasg~~Al~~A 111 (393)
T 1afw_A 40 YNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVAL--------NRQCSSGLTAVNDI 111 (393)
T ss_dssp HHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEE--------ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEE--------cCcCHHHHHHHHHH
Confidence 468899999999 99999997665322 12334556677998532 2 122 22345777778888
Q ss_pred HHHHHhcCCCCcEEEEE
Q 012506 407 LHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 407 ~~qL~~~~~~~~~gl~~ 423 (462)
...++... ++..|+.
T Consensus 112 ~~~I~~G~--~d~vLv~ 126 (393)
T 1afw_A 112 ANKIKVGQ--IDIGLAL 126 (393)
T ss_dssp HHHHHTTS--CSEEEEE
T ss_pred HHHHHCCC--CCEEEEE
Confidence 77777643 3676664
No 145
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=50.73 E-value=83 Score=31.42 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCCCCCcc
Q 012506 338 AVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID 356 (462)
..++.++|++||++++|||
T Consensus 98 l~aa~~AL~dAG~~~~~i~ 116 (430)
T 1ox0_A 98 LYAAQEAVNHANLDVEALN 116 (430)
T ss_dssp HHHHHHHHHHTTCCTTTSC
T ss_pred HHHHHHHHHHcCCChhhcC
Confidence 4688999999999999998
No 146
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=50.20 E-value=77 Score=31.42 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCCcc----EEEecCCC------------------------HH-------HHHHHHHHcCCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDID----LFEINEAF------------------------AS-------QFVYCRNKLGLDPEKI 382 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID----~~eihdaf------------------------a~-------~~~~~~e~LGl~~~~v 382 (462)
..|+.++|+.||++++||| -+-+--.+ .. ..-.+...||+..+.+
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 158 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINS 158 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcce
Confidence 4688999999999999999 44432211 10 1223445667754322
Q ss_pred CCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 383 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 383 n~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
.+ ....++|+..+..+...|+... ++..|+.
T Consensus 159 ~v--------~~aCss~~~Al~~A~~~I~~G~--~d~~lvg 189 (413)
T 3o04_A 159 TT--------VTACATATNSIGDAFKVIERGD--ADAMITG 189 (413)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTS--CSEEEEE
T ss_pred ee--------cchhHHHHHHHHHHHHHHHcCC--CCEEEEe
Confidence 22 2234667777777777777643 3677764
No 147
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=49.84 E-value=29 Score=35.02 Aligned_cols=98 Identities=13% Similarity=0.035 Sum_probs=56.2
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc--cccHHHHHHHHcCCC-CC
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ--RASECRMAAFYAGFP-ET 128 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~--~~~~a~~~a~~~Glp-~~ 128 (462)
++|.|.+.+--++.. ..++. ..+-...+++++|+++|++++|||.+.. .+.+.. .+.....+...+|.+ ..
T Consensus 279 a~I~g~~~~~d~~~~--t~p~~-~~~~~~~ai~~Al~~Agl~p~dId~ve~---HgtgT~~gD~~E~~al~~~fg~~~~~ 352 (438)
T 2iwz_A 279 AEVLGYGLSGDAGHI--TAPDP-EGEGALRCMAAALKDAGVQPEEISYINA---HATSTPLGDAAENKAIKHLFKDHAYA 352 (438)
T ss_dssp EEEEEEEEEECCSCS--SSCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC---CCCSCHHHHHHHHHHHHHHHGGGGGT
T ss_pred EEEecceecCCCCCC--CCCCC-CHHHHHHHHHHHHHHcCCCHHHcCEEEe---cCCCCcccCHHHHHHHHHHHhccCCC
Confidence 567777654333210 01111 1245577899999999999999998765 121110 112333344445542 12
Q ss_pred cceEE-----ecCCCchHHHHHHHHHHHHHcc
Q 012506 129 VPVRT-----VNRQCSSGLQAVADVAAAIKAG 155 (462)
Q Consensus 129 ~p~~~-----v~~~CsSgl~Ai~~Aa~~I~sG 155 (462)
.++.. -...+++|...+..++..++.|
T Consensus 353 ~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~ 384 (438)
T 2iwz_A 353 LAVSSTKGATGHLLGAAGAVEAAFTTLACYYQ 384 (438)
T ss_dssp SEEECCHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred cceecchhhhcCCHHHHHHHHHHHHHHHHhcC
Confidence 33322 2344678888888899999887
No 148
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=49.40 E-value=25 Score=34.13 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEec
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
+.+..+++++|+++|++++|||.|+++.-.+... -+...++.++..++. |.+.|+
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrvg~~~ak~la~~~~~----pl~~v~ 106 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRK----PIVGVN 106 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTC----CEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHHHHHHHHHHHHHcCC----CEEeeC
Confidence 5667899999999999999999998864322111 011234445555544 666664
No 149
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=48.21 E-value=8.8 Score=37.54 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC---ccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~---~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
..+.+..+++++|+++|++++|||.|.++.-.+... -+...++.++..++. |.+.|+ -+.+... +..
T Consensus 52 H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~~~ak~La~~~~~----Pl~~v~-----hl~aHa~-sa~ 121 (334)
T 3eno_A 52 HSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTATAARTISVLTGK----PIIGVN-----HPLGHIE-IGR 121 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHHHHHHHHHHHHTC----CCEEEC-----HHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHHHHHHHHhhccCC----CeEEec-----cHHHHHH-HHH
Confidence 345778999999999999999999999875322211 012234445555555 666663 3334332 233
Q ss_pred HHccC-CCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 152 IKAGF-YDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 152 I~sG~-~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+.++. .-++|++.... +.-+.+.. ..+.-.. ......+|..-..++...|+..+
T Consensus 122 ~~s~~~~pl~L~vsGg~--t~l~~~~~---~~~~~lg--~t~d~S~G~~fD~vA~~LGl~y~ 176 (334)
T 3eno_A 122 RVTGAIDPVMLYVSGGN--TQVIAHVN---GRYRVLG--ETLDIGIGNMIDKFAREAGIPFP 176 (334)
T ss_dssp HHHTCSSCEEEEESSSC--EEEEEECS---SBEEEEE--EBSSCCHHHHHHHHHTTTTCCSC
T ss_pred hcCCCCCCEEEEEECCC--cEEEEEeC---CEEEEec--cCCCccHHHHHHHHHHHcCCCCC
Confidence 44543 22444432221 11111110 0010000 11224677777788888887643
No 150
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=45.75 E-value=72 Score=35.77 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=62.4
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
.+|.|.+..--+... .++.. ...+-...++++|++++|++++|||.|-. |+.+..+ .+.....+...+|-....|
T Consensus 246 a~I~g~~~n~dg~~~-~~~t~-P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~g--D~~E~~Al~~~f~~~~~~~ 321 (965)
T 3hhd_A 246 ATILNAGTNTDGFKE-QGVTF-PSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVG--DPQELNGITRALCATRQEP 321 (965)
T ss_dssp EEEEEEEEEECCCCT-TCTTS-CCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTH--HHHHHHHHHHHHCSSCSSC
T ss_pred EEEEeeeccCCCCCC-CCCcC-CCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCC--CHHHHHHHHHHhcccCCCc
Confidence 578887765444211 11222 22445578899999999999999998764 3333222 2344555555555322223
Q ss_pred eEE-------ecCCCchHHHHHHHHHHHHHccCC
Q 012506 131 VRT-------VNRQCSSGLQAVADVAAAIKAGFY 157 (462)
Q Consensus 131 ~~~-------v~~~CsSgl~Ai~~Aa~~I~sG~~ 157 (462)
... -...+++|...+..+..+++.|.+
T Consensus 322 ~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~i 355 (965)
T 3hhd_A 322 LLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLW 355 (965)
T ss_dssp EEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEE
T ss_pred eeeeccccccccchhhhhHHHHHHHHHHHhcCCc
Confidence 221 134578999999999999998853
No 151
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=45.52 E-value=86 Score=34.91 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=62.1
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCC--C
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE--T 128 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~--~ 128 (462)
.+|.|.+..--++.. .+.. ...+-..++++++|+++|+++++||.+.. |+.+..+ .+.....+...+|... .
T Consensus 264 a~I~G~~~~~dg~~~--~~~~-p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~g--D~~E~~al~~~f~~~~~~~ 338 (915)
T 2qo3_A 264 AVVRGSALNQDGASN--GLSA-PSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALG--DPIEANALLDTYGRDRDAD 338 (915)
T ss_dssp EEEEEEEEEECCSCS--STTC-CCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTT--HHHHHHHHHHHTSSSCCTT
T ss_pred EEEEEEEEecCCCcc--CCCC-CCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccC--CHHHHHHHHHHhccccCCC
Confidence 578887765433321 1222 22455678999999999999999998864 3322221 2344555666676521 1
Q ss_pred cceEE-------ecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVRT-------VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~~-------v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.|+.. -....++|...+..++..++.|.
T Consensus 339 ~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ 373 (915)
T 2qo3_A 339 RPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGE 373 (915)
T ss_dssp SCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred CcccccCcccceeCCccccchHHHHHHHHHHhcCC
Confidence 23321 12346789999999999999885
No 152
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=39.60 E-value=39 Score=34.08 Aligned_cols=100 Identities=12% Similarity=0.026 Sum_probs=55.1
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcce
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~ 131 (462)
++|.|.+.+--++.. ..++. ..+-..++++++|+++|++++|||.+..= .++...........+...+|- ..++.
T Consensus 280 a~I~g~~~~~Dg~~~--~~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~~D~~E~~al~~~fg~-~~~~v 354 (434)
T 2gp6_A 280 ARIMGASITSDGFHM--VAPDP-NGERAGHAITRAIQLAGLAPGDIDHVNAH-ATGTQVGDLAEGRAINNALGG-NRPAV 354 (434)
T ss_dssp EEEEEEEEEECCSCS--SSCCT-TCHHHHHHHHHHHHHTTCCTTTEEEEECC-CCSCHHHHHHHHHHHHHHHTT-CCCEE
T ss_pred EEEEEEEEecCCCCC--CCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEEEe-CCcCccchHHHHHHHHHHhcc-CCCCc
Confidence 567776654332210 01111 12455778999999999999999977652 111100011222333333443 11121
Q ss_pred E-----EecCCCchHHHHHHHHHHHHHccC
Q 012506 132 R-----TVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 132 ~-----~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
. .-...+++|...+..+...++.|.
T Consensus 355 ~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 384 (434)
T 2gp6_A 355 YAPKSALGHSVGAVGAVESILTVLALRDQV 384 (434)
T ss_dssp CCTHHHHCBCTTTHHHHHHHHHHHHHHHSC
T ss_pred ccchhhhcCchhhhHHHHHHHHHHHHhcCc
Confidence 1 113456789989999999998875
No 153
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=39.49 E-value=61 Score=36.12 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=60.2
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCC--CC
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP--ET 128 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp--~~ 128 (462)
++|.|.+..--++.. + +... ..+-...+++++|+++|+++++||.+.. |+.+..+ .+.....+...+|.. ..
T Consensus 286 a~I~G~~~~~dg~~~-~-~~~P-~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g--D~~E~~al~~~fg~~~~~~ 360 (917)
T 2hg4_A 286 AVLRGSAVNQDGASN-G-LTAP-SGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG--DPIEVHALLSTYGAERDPD 360 (917)
T ss_dssp EEEEEEEEEECCSCS-S-SSCC-CHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH--HHHHHHHHHTTTTTSSCTT
T ss_pred EEEEEEEEecCCCcc-C-CCCC-CHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC--cHHHHHHHHHHhccccCCC
Confidence 678888765544321 1 1222 2455577899999999999999998765 2222111 223334444445541 11
Q ss_pred cceEE-------ecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVRT-------VNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~~-------v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.|+.. -...+++|...+..+...++.|.
T Consensus 361 ~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ 395 (917)
T 2hg4_A 361 DPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGE 395 (917)
T ss_dssp SCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTE
T ss_pred CceeccCcccceecchhhhHHHHHHHHHHHHhcCC
Confidence 23221 12346788889999999999885
No 154
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=37.90 E-value=14 Score=39.06 Aligned_cols=28 Identities=29% Similarity=0.427 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
-|..||+.+|++|||+++|||.+-++..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 3678999999999999999999998765
No 155
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=37.55 E-value=1.1e+02 Score=30.39 Aligned_cols=76 Identities=13% Similarity=0.052 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCC-CCCCcc-----EEEecCC-----------------------CH-------HHHHHHHHHcCCCCCC
Q 012506 338 AVAIPAAVKSAGL-QLDDID-----LFEINEA-----------------------FA-------SQFVYCRNKLGLDPEK 381 (462)
Q Consensus 338 ~~Ai~~aL~~AGl-~~~DID-----~~eihda-----------------------fa-------~~~~~~~e~LGl~~~~ 381 (462)
..++.++|++||+ ++++|| +|--... +. ...-.+...||+..+-
T Consensus 93 l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 172 (431)
T 2ix4_A 93 VCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPN 172 (431)
T ss_dssp HHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHCCCCce
Confidence 4688999999999 888876 5542211 10 1233455667875432
Q ss_pred CCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 382 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 382 vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+.+ ...-++|+..+..+...|+...- +..|+.
T Consensus 173 ~~v--------~taCsS~l~Al~~A~~~I~~G~~--d~aLvg 204 (431)
T 2ix4_A 173 HAA--------VTACATGAHSIGDATRMIQFGDA--DVMVAG 204 (431)
T ss_dssp ECB--------CCGGGHHHHHHHHHHHHHHHTSC--SEEEEE
T ss_pred eCc--------cChhHHHHHHHHHHHHHHHcCCC--CEEEEe
Confidence 333 22345677777777777776533 666654
No 156
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=35.48 E-value=18 Score=36.11 Aligned_cols=24 Identities=0% Similarity=0.105 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCccccCcEEE
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVV 102 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~viv 102 (462)
+.++++++|+++|++++|||.+++
T Consensus 209 ~~~~~~~~L~~agl~~~did~~~~ 232 (396)
T 1xpm_A 209 FQQSWNEYAKRQGKSLADFASLCF 232 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEe
Confidence 677899999999999999999887
No 157
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=35.31 E-value=78 Score=26.86 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=41.3
Q ss_pred EEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 52 v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
.+++|.|. + ++.+.++ +.++++++|++.|+++..|+.+..-..-.+- .--..++..+|+|
T Consensus 11 ~lvvGIGc----r------rg~~~~~-i~~ai~~aL~~~~l~~~~v~~latid~K~dE----~gL~~~A~~lg~p 70 (145)
T 2w6k_A 11 LLIAGIGC----R------RGCSAEH-LRALLERTLGEHGRSLAELDALASIDGKRDE----PGLRQLATLLERP 70 (145)
T ss_dssp CEEEEEEE----C------TTCCHHH-HHHHHHHHHHHTTCCGGGCCEEEEECSSSCC----HHHHHHHHHHTSC
T ss_pred eEEEEEee----C------CCCCHHH-HHHHHHHHHHHcCCCHHHcceEechHHhCCC----HHHHHHHHHhCCC
Confidence 48899886 2 4555555 5778899999999999999988764432221 1123566778884
No 158
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=31.11 E-value=19 Score=36.36 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++| ++|||.+.+- +.+.....+..+.||+.+
T Consensus 90 ~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~ 134 (425)
T 3sqz_A 90 AGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQP 134 (425)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCC
Confidence 468889999998 9999999874 234456777888999975
No 159
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=30.80 E-value=1.2e+02 Score=30.19 Aligned_cols=77 Identities=9% Similarity=0.093 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCCCCcc-----EEEecCCC--H----------------------------HHHHHHHHHcCCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDID-----LFEINEAF--A----------------------------SQFVYCRNKLGLDPEKI 382 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID-----~~eihdaf--a----------------------------~~~~~~~e~LGl~~~~v 382 (462)
..++.++|+++|++++||| +|--.... . ...-.+...||+..+-+
T Consensus 97 ~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 176 (428)
T 3mqd_A 97 HIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINY 176 (428)
T ss_dssp HHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCcee
Confidence 4688899999999998887 43321110 0 11233445577754333
Q ss_pred CCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 012506 383 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 424 (462)
Q Consensus 383 n~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~ 424 (462)
.+ ...-+||+..+..+.+.|+... ++..|+..
T Consensus 177 tv--------~~aCsSgl~Ai~~A~~~I~~G~--~d~alvgG 208 (428)
T 3mqd_A 177 SI--------SSACATSNHCIGNAYEMIQYGK--QDRMFAGG 208 (428)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTS--CSEEEEEE
T ss_pred ee--------cCccHHHHHHHHHHHHHHHcCC--CCEEEEEe
Confidence 33 2334667777888888887643 36777643
No 160
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=30.28 E-value=1.5e+02 Score=25.53 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHHHcC-CCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~ag-l~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
...+-+.+.+.+.|++.| ++.++||-+-| .+.+. -|. .+..+.
T Consensus 25 ~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~V---PGafE-iP~--------------------------------aa~~la 68 (156)
T 3nq4_A 25 FINDSLLDGAVDALTRIGQVKDDNITVVWV---PGAYE-LPL--------------------------------ATEALA 68 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSEEEEEE---SSTTT-HHH--------------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceEEEEc---CcHHH-HHH--------------------------------HHHHHH
Confidence 456777888889999999 98888874433 33322 121 122334
Q ss_pred HccCCCEEEEEee
Q 012506 153 KAGFYDIGIGAGL 165 (462)
Q Consensus 153 ~sG~~d~vLv~G~ 165 (462)
++|.||.+++.|+
T Consensus 69 ~~~~yDavIaLG~ 81 (156)
T 3nq4_A 69 KSGKYDAVVALGT 81 (156)
T ss_dssp HHCSCSEEEEEEE
T ss_pred hcCCCCEEEEeee
Confidence 7899999999997
No 161
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=26.49 E-value=1.4e+02 Score=25.31 Aligned_cols=50 Identities=20% Similarity=0.260 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 81 PVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 81 ~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+.+.+.+++.+|+++||-.+++ +++++.. ..++|..+- .+|+ ..+|.+..
T Consensus 55 ELl~eii~~N~l~~eDIvSv~F-TvT~DL~-A~FPA~aaR-~~Gw-~~VPLmc~ 104 (148)
T 1xho_A 55 KLLKEMAEKNGLEEDDIISIIF-TVTKDLD-AAFPAIAAR-NMGW-TSTALMCM 104 (148)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEE-EECTTCC-SSCTHHHHH-HTTC-TTSEEEEE
T ss_pred HHHHHHHHHcCCCHHHEEEEEE-EeCCccC-ccChHHHHH-HcCC-Cccchhhc
Confidence 3445667788999999988888 4456653 233333332 3477 46777764
No 162
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=24.79 E-value=28 Score=36.57 Aligned_cols=32 Identities=34% Similarity=0.490 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
|...+++++++++|++.+|||++-+||+-+..
T Consensus 49 g~~~~l~~~~~~~~~~~~~~~lir~nea~pvi 80 (610)
T 2d0o_A 49 GIQEALALVARGAGIAVSDISLIRINEATPVI 80 (610)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEEECCSEE
T ss_pred HHHHHHHHHHHHcCCChhhceeeeecccCccc
Confidence 56789999999999999999999999997754
No 163
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=22.91 E-value=1.9e+02 Score=24.75 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEE
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVV 102 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~viv 102 (462)
...+-+.+.+.+.|++.|++.++|+-+-|
T Consensus 25 ~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1rvv_A 25 FITSKLLSGAEDALLRHGVDTNDIDVAWV 53 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 45667778888999999988777766544
No 164
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=22.47 E-value=28 Score=26.06 Aligned_cols=27 Identities=30% Similarity=0.239 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+...|++.++++|.=+.++|++||+.|
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (72)
T 3onr_A 17 SWEQAAAEAVQRARDSVDDIRVARVIE 43 (72)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 446899999999999999999999865
No 165
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=21.71 E-value=27 Score=25.84 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
+...|++.++++|.=+.++|++||+.|.
T Consensus 15 S~edAi~nAi~~AskTl~ni~~~eV~e~ 42 (68)
T 2cc6_A 15 SFTAAADDAIDRAEDTLDNVVWAEVVDQ 42 (68)
T ss_dssp CHHHHHHHHHHHHHHHCSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEEE
Confidence 4468999999999999999999998653
No 166
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=21.64 E-value=28 Score=25.86 Aligned_cols=27 Identities=41% Similarity=0.555 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+...|++.++++|.=+.++|++||+-+
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (69)
T 2ux9_A 17 GLEAAIQAALARARKTLRHLDWFEVKE 43 (69)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 446899999999999999999999865
No 167
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=21.25 E-value=1.8e+02 Score=24.88 Aligned_cols=29 Identities=14% Similarity=-0.020 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEE
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVV 102 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~viv 102 (462)
...+-+.+.+.+.|++.|++.++||-+-|
T Consensus 25 ~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1hqk_A 25 ALVDRLVEGAIDCIVRHGGREEDITLVRV 53 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 45667778888999999988777766544
No 168
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=21.10 E-value=29 Score=25.78 Aligned_cols=27 Identities=26% Similarity=0.469 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+...|++.++++|.=+.++|++||+.+
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (69)
T 2yiz_A 17 GVDAAIQGGLARAAQTMRALDWFEVQS 43 (69)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 446899999999999999999999865
No 169
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=20.82 E-value=99 Score=30.73 Aligned_cols=26 Identities=8% Similarity=0.236 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEE
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVV 102 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~viv 102 (462)
+-...+++++|+++|++++|||.+..
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~ 310 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNA 310 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 34577899999999999999998764
No 170
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=20.53 E-value=31 Score=25.89 Aligned_cols=27 Identities=30% Similarity=0.465 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+...|++.++++|.=+.++|++||+.+
T Consensus 18 S~edAi~nAi~~AskTl~ni~~~eV~e 44 (72)
T 2vxa_A 18 GIEEAVNNAIARAGETLRHLRWFEVVD 44 (72)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhhccCCeEEEEEE
Confidence 446899999999999999999999865
No 171
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=20.50 E-value=42 Score=32.57 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=22.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
..+++++|+++|++++|||.+-+..
T Consensus 57 ~~~i~~~L~~ag~~~~did~Iav~~ 81 (334)
T 3eno_A 57 DTVISRALEKAKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 5689999999999999999998763
No 172
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=20.10 E-value=51 Score=30.14 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEec
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
+...++++|+++|++++|||.+-+.
T Consensus 38 l~~~i~~~L~~a~~~~~did~Iav~ 62 (231)
T 2gel_A 38 ILPMVQEILAASGASLNEIDALAFG 62 (231)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 5679999999999999999999885
Done!