BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012511
(462 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U2U7|MET17_MOUSE Methyltransferase-like protein 17, mitochondrial OS=Mus musculus
GN=Mettl17 PE=2 SV=2
Length = 461
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 39/283 (13%)
Query: 47 KSAYGDIGLKYRDDETIAYVASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSA 106
K+ Y L Y ++ ++ Y+A+R+ ++A +R E++ R+P F P ++DFG+GTGS
Sbjct: 141 KTTYHWQELSYSEELSLIYMAARLDGGFAAVFRAFHEIQARIPEFRPQTLMDFGSGTGSV 200
Query: 107 FWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDL--PLIHSYNSIQALNKDISKSE 164
WA W +SL + V+ S +M + L++G + P I Q L +
Sbjct: 201 AWAAHRTWGQSLREYVCVDSSAAMLGLAEKLLKGGSESGKPCIPGVFFRQFLPVS---PK 257
Query: 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHILWM 224
+ D+V+++Y L E+PS DRI +++ LW T LVLVE GT G ++ R+ +L
Sbjct: 258 VQFDVVVSAYALSELPSRADRIEVIQNLWRKTSHFLVLVENGTKAGHRLLMDARNLVL-- 315
Query: 225 EKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCPLENSGK--YCHFVQRL 282
E K + LR + APCPHE CP N+ K C F Q
Sbjct: 316 -----------------GEKEKSPLDLRPSF-VFAPCPHELPCPQLNASKSLACSFSQ-- 355
Query: 283 QRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRE--RWP 323
AY + ++E FS V RG P+E RWP
Sbjct: 356 -------AYHPIPFNWNKKPKEEIFSMVILARGS-PKEANRWP 390
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 403 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 461
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVVTARRHGRDLYRCARVSSWGDLLP 442
>sp|Q9H7H0|MET17_HUMAN Methyltransferase-like protein 17, mitochondrial OS=Homo sapiens
GN=METTL17 PE=1 SV=1
Length = 456
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 28 KELFEDP-LKSVEQSKRWKI-----KSAYGDIGLKYRDDETIAYVASRMPAVYSACYRVL 81
K+ E+P L E+ R + K+ Y L Y + ++ Y+A+R+ ++A R
Sbjct: 115 KKFLENPDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAF 174
Query: 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP 141
E+R R P F P ++DFG+GTGS WA +W +SL + V+ S +M + L++G
Sbjct: 175 HEIRARNPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGG 234
Query: 142 KDL--PLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDV 199
+ P I Q L + + D+V++++ L E+PS DR +V+ LW T
Sbjct: 235 SESGEPYIPGVFFRQFLPVS---PKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHF 291
Query: 200 LVLVEPGTPQGSSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVA 259
LVLVE GT G S++ R +L K K + R G + A
Sbjct: 292 LVLVENGTKAGHSLLMDARDLVL-------------------KGKEKSPLDPRPGF-VFA 331
Query: 260 PCPHEGRCPLENSGKYCHFVQRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPR 319
PCPHE CP + + C F Q AY + ++EKFS V RG P
Sbjct: 332 PCPHELPCP-QLTNLACSFSQ---------AYHPIPFSWNKKPKEEKFSMVILARGS-PE 380
Query: 320 E--RWP 323
E RWP
Sbjct: 381 EAHRWP 386
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 403 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 461
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 385 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVLTARRHGRDLYRCARVSSWGDLLP 438
>sp|Q2TBP8|MET17_BOVIN Methyltransferase-like protein 17, mitochondrial OS=Bos taurus
GN=METTL17 PE=2 SV=1
Length = 462
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 55 LKYRDDETIAYVASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVW 114
L Y + ++ Y+A+R+ ++A R E++ RLP F P ++DFG+GTGS WA W
Sbjct: 149 LSYSEGLSLVYMAARLDGGFAAVSRAFHEIQARLPEFQPQTLMDFGSGTGSVTWAAHSTW 208
Query: 115 PRSLEKVNLVEPSQSMQRAGQSLMQG--PKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172
+SL + V+ S +M + L++G +P + Q L + + D+V+A
Sbjct: 209 GQSLREYMCVDSSAAMLELAEKLLKGGSGSGMPCVPGVFFRQFLPVS---PKVQFDVVVA 265
Query: 173 SYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHILWMEKRKSRKY 232
++ L E+PS DR +V+ LW T LVL+E GT G S++ R +L
Sbjct: 266 AFSLSELPSKADRTDVVQTLWRKTGHFLVLIENGTKAGHSLLMDARDLVL---------- 315
Query: 233 EARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCPLENSGK--YCHFVQRLQRTTSQRA 290
KE S + R G + APCPHE CP + K C F Q A
Sbjct: 316 -------NGKEKSP--LDPRPGF-VFAPCPHELPCPQLTASKPLACSFSQ---------A 356
Query: 291 YKRSKSEPLRGFEDEKFSFVAFRRGERPR-ERWP 323
Y + ++EKFS V RG + RWP
Sbjct: 357 YYPIPFSWNKKPKEEKFSLVILARGSPEKANRWP 390
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 403 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 461
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVITARRHGRDLYRCARVSSWGDLLP 442
>sp|Q9UTM2|CO111_SCHPO Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cox1101 PE=1 SV=2
Length = 753
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 59 DDETIAYVASRMPAVYSACYRVLCEVRRRLPGFS--PAKVLDFGAGTGSAFWALREVWPR 116
D + +AY+ MP Y++ Y VL +++ S +LD G G G A V+P
Sbjct: 138 DPQVLAYIHQSMPYQYASLYSVLTDLKIVNSDVSCKSQHILDCGKGPGIGALASYSVFP- 196
Query: 117 SLEKVNLVEPSQSMQRAGQSLMQG--PKDLPLIHSYNSIQALNKDISKSEREHDLVIASY 174
+ V++VE + +++ + P P + S LN+ + + LVIAS
Sbjct: 197 TPNSVSIVEENPFLKKIIYDIHHNIYPSTSP---NPTSPVTLNRLPLGKKDSYTLVIASN 253
Query: 175 VLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQGSSIISQMRSHILWMEKRKSRK 231
L E+ S ++ +R LW L + +LVL E GT +G S+I + R+ +L
Sbjct: 254 KLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRGFSLIQRARTFLL--------- 304
Query: 232 YEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP--LENS--GKYCHFVQRLQRTTS 287
+KSK+T+ + + HIVAPCPH+GRCP +EN C F Q +
Sbjct: 305 ---QKSKNTSDK--------QFNAHIVAPCPHDGRCPIDIENGVRANICSFKQHFFLSPF 353
Query: 288 QRAY 291
R Y
Sbjct: 354 SRLY 357
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 385 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 444
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 445 PTLHRLAKKSLWGDLWPF 462
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFPL 464
>sp|Q86ZU7|CO112_SCHPO Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cos1102 PE=1 SV=2
Length = 753
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 59 DDETIAYVASRMPAVYSACYRVLCEVRRRLPGFS--PAKVLDFGAGTGSAFWALREVWPR 116
D + +AY+ MP Y++ Y VL +++ S +LD G G G A V+P
Sbjct: 138 DPQVLAYIHQSMPYQYASLYSVLTDLKIVNSDVSCKSQHILDCGKGPGIGALASYSVFP- 196
Query: 117 SLEKVNLVEPSQSMQRAGQSLMQG--PKDLPLIHSYNSIQALNKDISKSEREHDLVIASY 174
+ V++VE + +++ + P P + S LN+ + + LVIAS
Sbjct: 197 TPNSVSIVEENPFLKKIIYDIHHNIYPSTSP---NPTSPVTLNRLPLGKKDSYTLVIASN 253
Query: 175 VLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQGSSIISQMRSHILWMEKRKSRK 231
L E+ S ++ +R LW L + +LVL E GT +G S+I + R+ +L
Sbjct: 254 KLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRGFSLIQRARTFLL--------- 304
Query: 232 YEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP--LENS--GKYCHFVQRLQRTTS 287
+KSK+T+ + + HIVAPCPH+GRCP +EN C F Q +
Sbjct: 305 ---QKSKNTSDK--------QFNAHIVAPCPHDGRCPIDIENGVRANICSFKQHFFLSPF 353
Query: 288 QRAY 291
R Y
Sbjct: 354 SRLY 357
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 385 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 444
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 445 PTLHRLAKKSLWGDLWPF 462
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFPL 464
>sp|P36056|RT22_YEAST 37S ribosomal protein S22, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RSM22 PE=1
SV=1
Length = 628
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 186/459 (40%), Gaps = 99/459 (21%)
Query: 61 ETIAYVASRMPAVYSACYRVLCEVRRRL--PGFSPAKVLDFGAGTGSAFWALREVW---- 114
E A++AS Y + ++ L E+++R+ F P ++LD G G + AL ++
Sbjct: 127 EVDAHIASIFLQNYGSIFQSLKELQKRVGPDNFKPQRILDVGYGPATGIVALNDILGPNY 186
Query: 115 -----------------------PRSL-EKVNLVEPSQSMQRAGQSLMQGPKDLP----- 145
R L E V+ VE + S ++ Q + K+
Sbjct: 187 RPDLKDAVILGNAEMQERAKIILSRQLNEVVDTVEENVSTEKE-QETDRRNKNFQEDEHI 245
Query: 146 ---LIHSYNSIQALNKDISKSEREHDLVIASYVL---GEVPSLQDRITIVRQLWDLT-RD 198
+ N + L I S +E+DL+I ++ L G +Q I L L
Sbjct: 246 GEVMTKKINIMTNLRSSIPAS-KEYDLIILTHQLLHDGNQFPIQVDENIEHYLNILAPGG 304
Query: 199 VLVLVEPGTPQGSSIISQMRSHILWMEKRK----------SRKYEARKSKDTNKETSKDL 248
+V++E G P G II++ R L E SR R KD +L
Sbjct: 305 HIVIIERGNPMGFEIIARARQITLRPENFPDEFGKIPRPWSRGVTVRGKKDA------EL 358
Query: 249 VTLRSG--VHIVAPCPHEGRCPLE--NSGKYCHFVQR-LQRTTSQRAYKRSKSEPLRGFE 303
+ S + ++APCPH+ +CPL+ N Y H + L+ Q++ KR
Sbjct: 359 GNISSNYFLKVIAPCPHQRKCPLQVGNPNFYTHKEGKDLKFCNFQKSIKRP--------- 409
Query: 304 DEKFSFVAFRRGERPRERWPLDGMKFDTLK-EQHAKRNPEDLEI-DYEDLLRLQAEAEVE 361
KFS + ++G+ W DG + + + + +RN D EI +Y L+ E
Sbjct: 410 --KFS-IELKKGKLLATSW--DGSQGNASRLKGTGRRNGRDYEILNYSYLI-------FE 457
Query: 362 PCKKEDLVNYESDEVQDDTVDSDKDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDV 421
K++ E +++++ V+ D ++ D W RII PV+R V MD+
Sbjct: 458 RSHKDENTLKEIKKLRNENVNGKYDI-----GSLGDDTQNSWPRIINDPVKRKGHVMMDL 512
Query: 422 CRSIKRDGSEGSFQHLVFTRSKNPTLHRLAKKSLWGDLW 460
C G + +RS + ++ A+KS GDLW
Sbjct: 513 C------APSGELEKWTVSRSFSKQIYHDARKSKKGDLW 545
>sp|C6V598|BIOC_NEORI Malonyl-CoA O-methyltransferase BioC OS=Neorickettsia risticii
(strain Illinois) GN=bioC PE=3 SV=1
Length = 250
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 76 ACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVN 122
CY+++ +R RLP F PA VLD GAGTG L +P + +N
Sbjct: 30 CCYKLVAMIRERLPHFMPASVLDIGAGTGYLTKLLLSEFPNACYTMN 76
>sp|Q12N04|CMOA_SHEDO tRNA (cmo5U34)-methyltransferase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cmoA PE=3
SV=2
Length = 243
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 84 VRRRLPGFSP----------------AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPS 127
+RR +PG++ +KV D G+ GSA ++R ++ ++ S
Sbjct: 33 IRRSVPGYNQIIATLGDFARRYVTPNSKVFDLGSSLGSATLSIRRQIEGRQCQIIAIDNS 92
Query: 128 QSM-QRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRI 186
QSM +R ++L D + + I+ N DI+ + +V+ ++ L +P +DR
Sbjct: 93 QSMIERCEENLAAYVSDTQVTLVCDDIR--NVDINNAS----MVVLNFTLQFLPP-EDRD 145
Query: 187 TIVRQLWD--LTRDVLVLVE 204
T++++++D L +LVL E
Sbjct: 146 TLIKRIYDGMLPGGILVLSE 165
>sp|Q9CBT4|GLNE_MYCLE Glutamate-ammonia-ligase adenylyltransferase OS=Mycobacterium
leprae (strain TN) GN=glnE PE=3 SV=1
Length = 1004
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 36 KSVEQSKRWKIKSAYGDIGLKYRDDETIAYVASRMPAVYSACYRV--LCEV---RRRLPG 90
K+ E K +SA GD L R Y+A+ MP V++AC R + EV RRR+
Sbjct: 301 KTWEFQALLKARSAVGDAELGER------YLAALMPMVWAACERADFVAEVQAMRRRVEQ 354
Query: 91 FSPAKV----LDFGAG----TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK 142
PA V L G+G A L+ V RS E +++V ++ G+ G +
Sbjct: 355 LVPADVRGRELKLGSGGLRDVEFAVQLLQLVHGRSDESLHVVSTVDALAALGEGGYIGRE 414
Query: 143 DLP-LIHSYNSIQALNK--DISKSEREHDL 169
D L SY ++ L + + +R H L
Sbjct: 415 DAANLTASYEFLRLLEHRLQLQRLKRTHLL 444
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 33.9 bits (76), Expect = 2.8, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 280 QRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRERWPLDGMKFDTLKEQHAKR 339
+ L+R +R +R K E L+ E+ +R E+ R + K + LK Q +R
Sbjct: 2751 EELKRQEQER-LEREKQEQLQKEEE-------LKRQEQERLQ------KEEALKRQEQER 2796
Query: 340 NPEDLEIDYEDLLRLQAEAEVEPCKKEDLVNYESDEVQDDTVDSDKDQEKGEEE 393
++ E+ ++ RL+ E + + K+E+L E + +Q + ++QE+ ++E
Sbjct: 2797 LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2850
>sp|A1VFE7|RNH2_DESVV Ribonuclease HII OS=Desulfovibrio vulgaris subsp. vulgaris (strain
DP4) GN=rnhB PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 108 WALREVWPRSLEKVNLVEPS-QSMQRAGQSLMQGPKDL 144
W L VWPR ++++N+++ + ++M RA + L Q P L
Sbjct: 74 WGLGVVWPRDIDRINILQATFRAMARAVRVLRQPPPAL 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,572,269
Number of Sequences: 539616
Number of extensions: 7677692
Number of successful extensions: 28544
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 28342
Number of HSP's gapped (non-prelim): 235
length of query: 462
length of database: 191,569,459
effective HSP length: 121
effective length of query: 341
effective length of database: 126,275,923
effective search space: 43060089743
effective search space used: 43060089743
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)