Query 012511
Match_columns 462
No_of_seqs 354 out of 2106
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 10:51:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012511.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012511hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.6 3.1E-14 1.1E-18 138.6 17.7 147 56-212 33-186 (261)
2 3hnr_A Probable methyltransfer 99.3 5.4E-12 1.9E-16 117.8 11.3 105 92-210 45-151 (220)
3 1vl5_A Unknown conserved prote 99.3 4.6E-12 1.6E-16 121.8 10.5 109 91-210 36-146 (260)
4 2aot_A HMT, histamine N-methyl 99.3 4.8E-12 1.6E-16 124.3 10.4 119 92-211 52-179 (292)
5 3ofk_A Nodulation protein S; N 99.3 1.9E-11 6.6E-16 113.8 12.7 107 89-206 48-156 (216)
6 4hg2_A Methyltransferase type 99.3 1.2E-11 4E-16 120.1 11.3 117 82-216 31-147 (257)
7 3dtn_A Putative methyltransfer 99.3 6E-11 2.1E-15 111.8 15.7 110 92-211 44-155 (234)
8 4htf_A S-adenosylmethionine-de 99.3 3E-11 1E-15 117.8 12.7 117 79-206 56-175 (285)
9 3g5l_A Putative S-adenosylmeth 99.3 4.2E-11 1.4E-15 114.4 13.3 114 82-206 34-147 (253)
10 3ujc_A Phosphoethanolamine N-m 99.2 1.3E-11 4.6E-16 118.1 9.4 118 82-209 45-164 (266)
11 1pjz_A Thiopurine S-methyltran 99.2 7.8E-12 2.7E-16 116.5 7.2 101 92-203 22-139 (203)
12 3dlc_A Putative S-adenosyl-L-m 99.2 4.3E-11 1.5E-15 110.9 12.2 116 82-208 34-152 (219)
13 3bus_A REBM, methyltransferase 99.2 4.2E-11 1.4E-15 115.6 12.2 121 78-208 47-170 (273)
14 1xtp_A LMAJ004091AAA; SGPP, st 99.2 6.7E-11 2.3E-15 112.7 13.5 115 81-205 82-198 (254)
15 1nkv_A Hypothetical protein YJ 99.2 2.6E-11 8.8E-16 115.9 10.1 109 87-206 31-142 (256)
16 2p35_A Trans-aconitate 2-methy 99.2 3.2E-11 1.1E-15 115.3 10.7 113 84-209 25-137 (259)
17 2p7i_A Hypothetical protein; p 99.2 2.4E-11 8.2E-16 114.7 9.6 104 92-209 42-146 (250)
18 3jwh_A HEN1; methyltransferase 99.2 1.7E-10 5.8E-15 107.7 15.1 105 92-205 29-142 (217)
19 3ccf_A Cyclopropane-fatty-acyl 99.2 1.3E-10 4.5E-15 112.9 14.6 104 91-209 56-159 (279)
20 2o57_A Putative sarcosine dime 99.2 3.8E-11 1.3E-15 117.6 10.8 120 80-209 66-192 (297)
21 3l8d_A Methyltransferase; stru 99.2 8.5E-11 2.9E-15 111.1 12.8 115 81-209 44-158 (242)
22 1xxl_A YCGJ protein; structura 99.2 7.3E-11 2.5E-15 112.2 12.2 109 91-210 20-130 (239)
23 3sm3_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 109.5 12.9 114 92-212 30-149 (235)
24 3pfg_A N-methyltransferase; N, 99.2 1.4E-10 4.7E-15 111.6 13.9 124 72-211 31-158 (263)
25 3ege_A Putative methyltransfer 99.2 3.7E-11 1.3E-15 115.9 9.9 108 84-207 26-133 (261)
26 3dh0_A SAM dependent methyltra 99.2 6.6E-11 2.2E-15 110.3 11.0 110 92-209 37-148 (219)
27 3bkw_A MLL3908 protein, S-aden 99.2 7.9E-11 2.7E-15 111.3 11.7 111 85-206 36-146 (243)
28 3gu3_A Methyltransferase; alph 99.2 7.3E-11 2.5E-15 115.4 11.5 106 92-206 22-128 (284)
29 3ou2_A SAM-dependent methyltra 99.2 9.1E-11 3.1E-15 108.8 11.6 105 93-211 47-153 (218)
30 2gs9_A Hypothetical protein TT 99.2 9.5E-11 3.2E-15 108.7 11.5 104 92-211 36-139 (211)
31 2yqz_A Hypothetical protein TT 99.2 1.8E-10 6E-15 110.2 13.5 101 92-203 39-140 (263)
32 2xvm_A Tellurite resistance pr 99.2 1.1E-10 3.7E-15 106.7 11.2 107 91-209 31-141 (199)
33 1kpg_A CFA synthase;, cyclopro 99.2 2.5E-10 8.7E-15 111.1 14.5 122 79-210 51-174 (287)
34 3g5t_A Trans-aconitate 3-methy 99.2 7.1E-11 2.4E-15 116.1 10.5 107 92-207 36-152 (299)
35 3hem_A Cyclopropane-fatty-acyl 99.2 2.3E-10 7.8E-15 112.6 14.0 121 79-211 59-190 (302)
36 3jwg_A HEN1, methyltransferase 99.2 2.6E-10 8.8E-15 106.5 13.6 104 92-204 29-141 (219)
37 3bkx_A SAM-dependent methyltra 99.2 1.3E-10 4.6E-15 112.2 12.0 119 87-209 38-164 (275)
38 3h2b_A SAM-dependent methyltra 99.2 1.8E-10 6.2E-15 106.1 12.2 103 93-209 42-146 (203)
39 3mgg_A Methyltransferase; NYSG 99.2 1.4E-10 4.8E-15 112.2 11.9 107 92-207 37-145 (276)
40 3e8s_A Putative SAM dependent 99.2 1.3E-10 4.5E-15 108.1 11.3 104 92-207 52-155 (227)
41 3iv6_A Putative Zn-dependent a 99.2 2.6E-10 9E-15 110.8 13.6 106 89-205 42-149 (261)
42 3i9f_A Putative type 11 methyl 99.1 6.3E-11 2.1E-15 106.1 8.2 100 92-208 17-116 (170)
43 3dli_A Methyltransferase; PSI- 99.1 8.1E-11 2.8E-15 111.8 9.1 100 93-207 42-143 (240)
44 3bxo_A N,N-dimethyltransferase 99.1 4E-10 1.4E-14 106.1 13.6 104 92-209 40-146 (239)
45 1y8c_A S-adenosylmethionine-de 99.1 4.6E-10 1.6E-14 105.9 13.9 123 71-205 17-143 (246)
46 3f4k_A Putative methyltransfer 99.1 1.6E-10 5.6E-15 110.3 10.7 104 92-206 46-152 (257)
47 2qe6_A Uncharacterized protein 99.1 1.3E-09 4.4E-14 106.5 17.4 111 92-207 77-199 (274)
48 3ggd_A SAM-dependent methyltra 99.1 3.4E-10 1.2E-14 107.5 12.8 113 92-211 56-170 (245)
49 4fsd_A Arsenic methyltransfera 99.1 9.5E-11 3.2E-15 119.8 9.5 113 92-208 83-207 (383)
50 2ex4_A Adrenal gland protein A 99.1 1.2E-10 4.1E-15 110.7 9.4 107 92-208 79-189 (241)
51 3e23_A Uncharacterized protein 99.1 4.4E-10 1.5E-14 104.3 13.0 109 80-206 33-143 (211)
52 2fk8_A Methoxy mycolic acid sy 99.1 4.6E-10 1.6E-14 111.1 13.7 122 79-210 77-200 (318)
53 3kkz_A Uncharacterized protein 99.1 9.6E-11 3.3E-15 113.0 8.6 104 92-206 46-152 (267)
54 3thr_A Glycine N-methyltransfe 99.1 4.4E-11 1.5E-15 116.8 6.1 126 71-206 39-177 (293)
55 3vc1_A Geranyl diphosphate 2-C 99.1 2.4E-10 8.1E-15 113.2 11.3 115 84-209 108-226 (312)
56 2gb4_A Thiopurine S-methyltran 99.1 1.3E-10 4.3E-15 112.4 9.1 102 92-204 68-191 (252)
57 3lcc_A Putative methyl chlorid 99.1 1E-10 3.5E-15 110.6 7.8 108 91-207 65-174 (235)
58 3hm2_A Precorrin-6Y C5,15-meth 99.1 5E-10 1.7E-14 100.6 11.7 102 92-206 25-129 (178)
59 2a14_A Indolethylamine N-methy 99.1 1.2E-10 4.2E-15 112.6 7.9 116 89-207 52-200 (263)
60 1ve3_A Hypothetical protein PH 99.1 3.9E-10 1.3E-14 105.4 11.0 114 81-207 29-145 (227)
61 4e2x_A TCAB9; kijanose, tetron 99.1 1.8E-10 6.2E-15 118.6 9.2 116 80-206 95-210 (416)
62 3m70_A Tellurite resistance pr 99.1 2.8E-10 9.5E-15 110.9 10.1 104 92-207 120-226 (286)
63 2pxx_A Uncharacterized protein 99.0 3.3E-10 1.1E-14 104.7 8.6 108 92-208 42-163 (215)
64 3mti_A RRNA methylase; SAM-dep 99.0 2.5E-09 8.6E-14 97.0 14.1 120 92-220 22-152 (185)
65 2avn_A Ubiquinone/menaquinone 99.0 1.4E-09 4.9E-14 104.5 13.0 100 92-206 54-154 (260)
66 2i62_A Nicotinamide N-methyltr 99.0 1.1E-10 3.9E-15 111.7 5.1 117 80-205 45-199 (265)
67 3g07_A 7SK snRNA methylphospha 99.0 2E-10 6.7E-15 113.0 6.9 48 91-140 45-92 (292)
68 2p8j_A S-adenosylmethionine-de 99.0 1.1E-09 3.6E-14 101.2 10.8 106 92-208 23-132 (209)
69 3bgv_A MRNA CAP guanine-N7 met 99.0 5.6E-10 1.9E-14 110.5 9.3 108 92-207 34-158 (313)
70 2yxd_A Probable cobalt-precorr 99.0 2.5E-09 8.7E-14 95.9 12.1 109 91-221 34-144 (183)
71 2vdw_A Vaccinia virus capping 99.0 4.1E-10 1.4E-14 111.7 7.4 109 93-206 49-171 (302)
72 1wzn_A SAM-dependent methyltra 99.0 3.5E-09 1.2E-13 100.8 13.6 120 74-205 23-146 (252)
73 3cc8_A Putative methyltransfer 99.0 1E-09 3.5E-14 102.2 9.6 103 91-208 31-134 (230)
74 3g2m_A PCZA361.24; SAM-depende 99.0 1.3E-09 4.5E-14 107.0 10.8 104 92-207 82-193 (299)
75 1vbf_A 231AA long hypothetical 99.0 2.7E-09 9.2E-14 100.3 12.5 100 91-207 69-168 (231)
76 3ocj_A Putative exported prote 99.0 8.5E-10 2.9E-14 108.8 9.0 108 92-208 118-231 (305)
77 3gwz_A MMCR; methyltransferase 99.0 6E-09 2.1E-13 105.8 15.2 118 81-210 191-313 (369)
78 3i53_A O-methyltransferase; CO 99.0 2E-09 6.9E-14 107.4 11.3 107 92-210 169-280 (332)
79 1vlm_A SAM-dependent methyltra 99.0 3.3E-09 1.1E-13 99.3 11.9 96 93-208 48-143 (219)
80 3dp7_A SAM-dependent methyltra 99.0 3.9E-09 1.3E-13 107.0 13.1 111 92-209 179-292 (363)
81 3fzg_A 16S rRNA methylase; met 99.0 9.2E-10 3.2E-14 101.6 7.7 122 68-204 31-152 (200)
82 3p9n_A Possible methyltransfer 99.0 2.3E-09 7.9E-14 98.0 10.3 117 80-206 33-155 (189)
83 1ri5_A MRNA capping enzyme; me 99.0 3.8E-09 1.3E-13 102.7 12.4 106 92-206 64-176 (298)
84 1p91_A Ribosomal RNA large sub 98.9 5.8E-09 2E-13 100.4 13.2 119 71-209 64-183 (269)
85 3e05_A Precorrin-6Y C5,15-meth 98.9 1E-08 3.5E-13 94.7 14.3 114 92-221 40-155 (204)
86 3mcz_A O-methyltransferase; ad 98.9 2.9E-09 9.8E-14 107.0 11.3 118 83-209 169-292 (352)
87 3d2l_A SAM-dependent methyltra 98.9 4.3E-09 1.5E-13 99.2 11.7 100 93-204 34-137 (243)
88 1dus_A MJ0882; hypothetical pr 98.9 4E-09 1.4E-13 95.4 10.9 103 92-207 52-160 (194)
89 3eey_A Putative rRNA methylase 98.9 5E-09 1.7E-13 96.0 11.7 122 93-220 23-156 (197)
90 3lbf_A Protein-L-isoaspartate 98.9 6.1E-09 2.1E-13 96.4 11.8 99 91-206 76-176 (210)
91 1x19_A CRTF-related protein; m 98.9 1.3E-08 4.3E-13 102.8 14.7 117 81-209 179-300 (359)
92 2g72_A Phenylethanolamine N-me 98.9 6.7E-10 2.3E-14 108.6 5.1 110 92-204 71-215 (289)
93 3orh_A Guanidinoacetate N-meth 98.9 1.5E-09 5.1E-14 103.4 7.2 105 92-204 60-170 (236)
94 3giw_A Protein of unknown func 98.9 1.7E-08 5.8E-13 98.5 14.6 157 60-220 42-216 (277)
95 3u81_A Catechol O-methyltransf 98.9 5.5E-09 1.9E-13 98.1 10.8 124 79-211 48-176 (221)
96 2r3s_A Uncharacterized protein 98.9 6E-09 2.1E-13 103.6 11.7 108 91-209 164-276 (335)
97 3cgg_A SAM-dependent methyltra 98.9 9.3E-09 3.2E-13 93.0 12.0 102 92-207 46-150 (195)
98 1qzz_A RDMB, aclacinomycin-10- 98.9 5.5E-09 1.9E-13 105.7 11.4 115 83-209 173-294 (374)
99 2yxe_A Protein-L-isoaspartate 98.9 8.8E-09 3E-13 95.7 11.8 103 91-207 76-180 (215)
100 2kw5_A SLR1183 protein; struct 98.9 1.1E-08 3.7E-13 94.0 12.2 100 95-207 32-134 (202)
101 1zx0_A Guanidinoacetate N-meth 98.9 3.3E-09 1.1E-13 100.5 8.9 106 92-206 60-172 (236)
102 3htx_A HEN1; HEN1, small RNA m 98.9 1.4E-08 4.9E-13 111.4 14.3 109 92-206 721-836 (950)
103 1o9g_A RRNA methyltransferase; 98.9 1.1E-08 3.7E-13 97.9 11.5 58 81-140 40-99 (250)
104 3grz_A L11 mtase, ribosomal pr 98.9 7.4E-09 2.5E-13 95.6 9.9 110 79-207 49-162 (205)
105 3q87_B N6 adenine specific DNA 98.9 1E-08 3.5E-13 92.5 10.6 98 92-208 23-127 (170)
106 3dr5_A Putative O-methyltransf 98.9 2.6E-08 9E-13 94.0 13.8 126 70-202 34-161 (221)
107 1nt2_A Fibrillarin-like PRE-rR 98.9 6.3E-09 2.1E-13 97.5 9.4 105 92-205 57-162 (210)
108 1l3i_A Precorrin-6Y methyltran 98.8 7.2E-09 2.5E-13 93.5 9.3 102 91-206 32-136 (192)
109 3fpf_A Mtnas, putative unchara 98.8 2.1E-08 7E-13 98.9 13.2 99 91-204 121-222 (298)
110 1ws6_A Methyltransferase; stru 98.8 8.9E-09 3E-13 91.6 9.7 107 92-207 41-150 (171)
111 4dzr_A Protein-(glutamine-N5) 98.8 5E-09 1.7E-13 96.5 8.3 79 91-176 29-111 (215)
112 4df3_A Fibrillarin-like rRNA/T 98.8 6.2E-09 2.1E-13 99.4 9.1 106 92-204 77-182 (233)
113 1af7_A Chemotaxis receptor met 98.8 7.9E-09 2.7E-13 101.1 10.0 109 92-202 105-250 (274)
114 4azs_A Methyltransferase WBDD; 98.8 9.8E-09 3.3E-13 110.3 11.7 95 79-183 55-151 (569)
115 1fbn_A MJ fibrillarin homologu 98.8 1.1E-08 3.9E-13 96.5 10.7 101 92-203 74-177 (230)
116 2ip2_A Probable phenazine-spec 98.8 1.1E-08 3.8E-13 101.9 10.9 116 81-209 157-277 (334)
117 1tw3_A COMT, carminomycin 4-O- 98.8 1.6E-08 5.6E-13 101.7 12.1 114 84-209 175-294 (360)
118 1ej0_A FTSJ; methyltransferase 98.8 9.1E-09 3.1E-13 91.2 8.7 115 92-219 22-151 (180)
119 3njr_A Precorrin-6Y methylase; 98.8 3.7E-08 1.3E-12 91.6 13.3 111 92-222 55-168 (204)
120 3evz_A Methyltransferase; NYSG 98.8 7.6E-09 2.6E-13 97.2 8.6 119 92-221 55-193 (230)
121 3uwp_A Histone-lysine N-methyl 98.8 8E-09 2.7E-13 105.9 9.3 121 80-212 161-296 (438)
122 3bzb_A Uncharacterized protein 98.8 1.7E-08 5.6E-13 98.8 10.9 111 91-206 78-208 (281)
123 1ne2_A Hypothetical protein TA 98.8 3.2E-08 1.1E-12 91.0 11.6 115 74-205 34-148 (200)
124 1dl5_A Protein-L-isoaspartate 98.8 2.7E-08 9.3E-13 98.9 11.7 101 91-205 74-176 (317)
125 1u2z_A Histone-lysine N-methyl 98.8 7.6E-09 2.6E-13 107.3 7.9 122 80-211 230-366 (433)
126 1yzh_A TRNA (guanine-N(7)-)-me 98.8 4.3E-08 1.5E-12 91.3 12.2 104 93-205 42-157 (214)
127 3lst_A CALO1 methyltransferase 98.8 2.6E-08 9E-13 100.2 11.5 113 82-209 174-291 (348)
128 2esr_A Methyltransferase; stru 98.8 7.7E-09 2.6E-13 93.1 6.9 107 91-207 30-141 (177)
129 3m33_A Uncharacterized protein 98.8 1.1E-08 3.9E-13 96.2 8.2 91 92-201 48-139 (226)
130 2fpo_A Methylase YHHF; structu 98.8 2.8E-08 9.6E-13 92.2 10.2 102 93-204 55-160 (202)
131 2fca_A TRNA (guanine-N(7)-)-me 98.8 6.4E-08 2.2E-12 90.6 12.7 106 93-205 39-154 (213)
132 3dmg_A Probable ribosomal RNA 98.7 3.9E-08 1.3E-12 100.6 11.9 111 91-212 232-347 (381)
133 2fhp_A Methylase, putative; al 98.7 1.5E-08 5E-13 91.6 7.7 108 92-206 44-156 (187)
134 3mb5_A SAM-dependent methyltra 98.7 2.9E-08 9.9E-13 94.8 10.1 103 91-207 92-197 (255)
135 3ntv_A MW1564 protein; rossman 98.7 2.1E-08 7E-13 95.0 9.0 119 70-202 52-174 (232)
136 3tfw_A Putative O-methyltransf 98.7 4E-08 1.4E-12 94.1 11.1 105 92-204 63-170 (248)
137 3dxy_A TRNA (guanine-N(7)-)-me 98.7 2.5E-08 8.7E-13 93.9 9.4 107 92-205 34-151 (218)
138 1xdz_A Methyltransferase GIDB; 98.7 3.1E-08 1.1E-12 94.1 10.1 103 92-204 70-174 (240)
139 2ift_A Putative methylase HI07 98.7 2E-08 6.8E-13 93.1 8.5 102 93-206 54-165 (201)
140 4dcm_A Ribosomal RNA large sub 98.7 2.3E-08 7.7E-13 102.1 9.4 118 87-211 217-340 (375)
141 2pwy_A TRNA (adenine-N(1)-)-me 98.7 2.5E-08 8.5E-13 95.1 9.0 108 87-207 91-201 (258)
142 3g89_A Ribosomal RNA small sub 98.7 2.8E-08 9.7E-13 95.6 9.3 118 92-221 80-199 (249)
143 1g8a_A Fibrillarin-like PRE-rR 98.7 4.5E-08 1.5E-12 91.9 10.2 102 92-203 73-177 (227)
144 1fp1_D Isoliquiritigenin 2'-O- 98.7 3.1E-08 1.1E-12 100.5 9.8 111 81-208 197-310 (372)
145 1jg1_A PIMT;, protein-L-isoasp 98.7 3.1E-08 1.1E-12 93.7 9.1 100 92-207 91-192 (235)
146 2b3t_A Protein methyltransfera 98.7 2.3E-07 7.7E-12 90.1 15.3 84 81-174 99-184 (276)
147 3reo_A (ISO)eugenol O-methyltr 98.7 6.5E-08 2.2E-12 98.2 11.9 111 82-209 192-305 (368)
148 3r0q_C Probable protein argini 98.7 2.3E-08 7.8E-13 102.0 8.5 104 88-203 59-168 (376)
149 3p9c_A Caffeic acid O-methyltr 98.7 8.2E-08 2.8E-12 97.4 12.6 112 81-209 189-303 (364)
150 1i9g_A Hypothetical protein RV 98.7 3.9E-08 1.3E-12 95.2 9.7 103 91-206 98-205 (280)
151 1fp2_A Isoflavone O-methyltran 98.7 2.4E-08 8.2E-13 100.5 8.5 101 92-209 188-293 (352)
152 3ckk_A TRNA (guanine-N(7)-)-me 98.7 2.7E-08 9.2E-13 94.9 8.4 106 92-205 46-169 (235)
153 1yb2_A Hypothetical protein TA 98.7 3.4E-08 1.1E-12 96.0 9.1 102 91-206 109-213 (275)
154 3bwc_A Spermidine synthase; SA 98.7 6.1E-08 2.1E-12 96.0 10.8 106 92-205 95-211 (304)
155 3adn_A Spermidine synthase; am 98.7 4.9E-08 1.7E-12 96.4 10.0 105 92-204 83-198 (294)
156 3tr6_A O-methyltransferase; ce 98.7 2.9E-08 1E-12 92.8 8.0 107 92-205 64-175 (225)
157 2pjd_A Ribosomal RNA small sub 98.7 5.4E-08 1.8E-12 97.8 10.4 106 92-207 196-306 (343)
158 2fyt_A Protein arginine N-meth 98.7 3.4E-08 1.2E-12 99.4 8.9 100 91-201 63-168 (340)
159 1i1n_A Protein-L-isoaspartate 98.7 8.1E-08 2.8E-12 89.9 10.8 100 92-205 77-183 (226)
160 3c3p_A Methyltransferase; NP_9 98.7 5.3E-08 1.8E-12 90.3 9.5 102 92-204 56-160 (210)
161 3duw_A OMT, O-methyltransferas 98.7 1.1E-07 3.9E-12 88.7 11.4 106 92-204 58-167 (223)
162 4a6d_A Hydroxyindole O-methylt 98.7 2.9E-07 1E-11 92.9 15.0 104 93-208 180-287 (353)
163 2nxc_A L11 mtase, ribosomal pr 98.7 8.1E-08 2.8E-12 92.4 10.3 101 92-207 120-221 (254)
164 1sui_A Caffeoyl-COA O-methyltr 98.7 9.9E-08 3.4E-12 91.5 10.8 115 79-203 69-189 (247)
165 3q7e_A Protein arginine N-meth 98.6 4.2E-08 1.5E-12 99.0 8.3 99 92-201 66-170 (349)
166 3lpm_A Putative methyltransfer 98.6 7.5E-08 2.6E-12 92.6 9.7 106 92-206 49-178 (259)
167 1o54_A SAM-dependent O-methylt 98.6 1.2E-07 4.2E-12 91.9 10.9 102 91-206 111-215 (277)
168 2gpy_A O-methyltransferase; st 98.6 7.1E-08 2.4E-12 91.0 8.8 101 93-204 55-160 (233)
169 3gdh_A Trimethylguanosine synt 98.6 5.2E-09 1.8E-13 99.2 0.8 79 92-181 78-159 (241)
170 2zfu_A Nucleomethylin, cerebra 98.6 6.3E-08 2.2E-12 89.8 8.2 88 92-207 67-154 (215)
171 1jsx_A Glucose-inhibited divis 98.6 1E-07 3.4E-12 87.8 9.4 99 92-204 65-165 (207)
172 3id6_C Fibrillarin-like rRNA/T 98.6 1.5E-07 5E-12 89.8 10.3 107 92-206 76-183 (232)
173 2ozv_A Hypothetical protein AT 98.6 1.3E-07 4.4E-12 91.3 10.1 107 92-206 36-172 (260)
174 1g6q_1 HnRNP arginine N-methyl 98.6 1E-07 3.4E-12 95.4 9.5 99 92-201 38-142 (328)
175 2ipx_A RRNA 2'-O-methyltransfe 98.6 7.9E-08 2.7E-12 90.7 8.3 102 92-203 77-181 (233)
176 1r18_A Protein-L-isoaspartate( 98.6 8.8E-08 3E-12 90.0 8.4 100 93-205 85-195 (227)
177 2y1w_A Histone-arginine methyl 98.6 1E-07 3.5E-12 96.0 9.3 108 82-202 40-153 (348)
178 2pt6_A Spermidine synthase; tr 98.6 1.4E-07 4.7E-12 94.3 10.0 103 92-203 116-229 (321)
179 3hp7_A Hemolysin, putative; st 98.6 7.5E-08 2.5E-12 94.8 7.8 101 90-203 83-184 (291)
180 2i7c_A Spermidine synthase; tr 98.6 1.4E-07 4.7E-12 92.5 9.7 105 92-204 78-192 (283)
181 2b2c_A Spermidine synthase; be 98.6 1.4E-07 4.9E-12 93.9 9.7 119 92-220 108-238 (314)
182 2o07_A Spermidine synthase; st 98.6 1.1E-07 3.8E-12 94.2 8.9 121 92-221 95-226 (304)
183 3r3h_A O-methyltransferase, SA 98.6 2.1E-08 7.3E-13 95.9 3.5 106 92-204 60-170 (242)
184 2pbf_A Protein-L-isoaspartate 98.6 1.3E-07 4.3E-12 88.6 8.8 103 92-206 80-195 (227)
185 1zg3_A Isoflavanone 4'-O-methy 98.6 8.4E-08 2.9E-12 96.8 7.8 99 93-208 194-297 (358)
186 1wy7_A Hypothetical protein PH 98.6 6.5E-07 2.2E-11 82.4 13.1 99 91-202 48-147 (207)
187 2b25_A Hypothetical protein; s 98.6 9.2E-08 3.1E-12 95.6 7.8 103 92-206 105-221 (336)
188 3gjy_A Spermidine synthase; AP 98.6 9.3E-07 3.2E-11 88.0 14.9 109 89-205 86-201 (317)
189 2yvl_A TRMI protein, hypotheti 98.6 5.8E-07 2E-11 84.9 13.0 100 91-206 90-192 (248)
190 1inl_A Spermidine synthase; be 98.5 2.1E-07 7.1E-12 91.8 10.0 121 92-221 90-222 (296)
191 2vdv_E TRNA (guanine-N(7)-)-me 98.5 2.1E-07 7.2E-12 88.8 9.7 105 92-204 49-173 (246)
192 1iy9_A Spermidine synthase; ro 98.5 2.9E-07 9.9E-12 89.8 10.6 108 92-208 75-192 (275)
193 3c3y_A Pfomt, O-methyltransfer 98.5 2.1E-07 7.2E-12 88.5 9.3 115 79-203 60-180 (237)
194 1uir_A Polyamine aminopropyltr 98.5 1.1E-07 3.6E-12 94.7 7.5 104 92-203 77-194 (314)
195 4hc4_A Protein arginine N-meth 98.5 1.3E-07 4.4E-12 96.5 8.1 99 91-201 82-186 (376)
196 2hnk_A SAM-dependent O-methylt 98.5 2.3E-07 7.9E-12 87.9 8.9 106 93-204 61-181 (239)
197 1nv8_A HEMK protein; class I a 98.5 5.9E-07 2E-11 88.0 11.8 103 93-208 124-252 (284)
198 2avd_A Catechol-O-methyltransf 98.5 2.4E-07 8.3E-12 86.7 8.3 106 92-204 69-179 (229)
199 2plw_A Ribosomal RNA methyltra 98.5 4.7E-07 1.6E-11 82.9 10.0 36 93-128 23-58 (201)
200 3mq2_A 16S rRNA methyltransfer 98.5 6.6E-08 2.3E-12 90.0 4.2 102 92-203 27-139 (218)
201 3cbg_A O-methyltransferase; cy 98.5 4.8E-07 1.6E-11 85.6 10.1 106 92-204 72-182 (232)
202 2nyu_A Putative ribosomal RNA 98.5 1.3E-06 4.4E-11 79.5 12.7 104 93-207 23-148 (196)
203 1xj5_A Spermidine synthase 1; 98.5 4.2E-07 1.4E-11 91.3 10.0 104 92-203 120-234 (334)
204 3tma_A Methyltransferase; thum 98.5 1E-06 3.4E-11 88.8 12.5 107 92-205 203-318 (354)
205 2frn_A Hypothetical protein PH 98.5 2.6E-07 9E-12 90.1 7.8 99 93-206 126-227 (278)
206 3frh_A 16S rRNA methylase; met 98.4 3.5E-07 1.2E-11 87.4 8.1 100 92-204 105-206 (253)
207 3opn_A Putative hemolysin; str 98.4 3E-07 1E-11 87.5 7.7 101 91-204 36-137 (232)
208 1mjf_A Spermidine synthase; sp 98.4 4.3E-07 1.5E-11 88.8 8.7 120 92-220 75-209 (281)
209 2bm8_A Cephalosporin hydroxyla 98.4 3.1E-07 1E-11 87.5 7.3 100 93-205 82-188 (236)
210 3b3j_A Histone-arginine methyl 98.4 3.7E-07 1.3E-11 96.0 8.4 109 82-202 148-261 (480)
211 2f8l_A Hypothetical protein LM 98.4 7.6E-07 2.6E-11 89.4 9.9 125 92-223 130-275 (344)
212 2ld4_A Anamorsin; methyltransf 98.4 1.6E-07 5.4E-12 84.5 4.4 87 92-205 12-102 (176)
213 3kr9_A SAM-dependent methyltra 98.4 1.5E-06 5.3E-11 82.3 11.2 112 93-223 16-132 (225)
214 3lcv_B Sisomicin-gentamicin re 98.4 1.1E-07 3.9E-12 91.6 3.4 106 92-207 132-239 (281)
215 1ixk_A Methyltransferase; open 98.4 1.3E-06 4.4E-11 86.9 10.3 107 92-205 118-247 (315)
216 2wa2_A Non-structural protein 98.4 6.9E-07 2.4E-11 87.3 8.1 116 81-211 71-199 (276)
217 2oxt_A Nucleoside-2'-O-methylt 98.4 6.4E-07 2.2E-11 87.0 7.8 105 92-211 74-191 (265)
218 3p2e_A 16S rRNA methylase; met 98.3 2.4E-07 8.3E-12 87.6 4.4 41 92-134 24-65 (225)
219 3gnl_A Uncharacterized protein 98.3 2.4E-06 8.1E-11 81.9 11.1 115 93-223 22-138 (244)
220 3lec_A NADB-rossmann superfami 98.3 3.1E-06 1.1E-10 80.5 11.4 112 93-223 22-138 (230)
221 3ajd_A Putative methyltransfer 98.3 1.8E-06 6.1E-11 83.9 9.9 111 92-205 83-212 (274)
222 2cmg_A Spermidine synthase; tr 98.3 1.1E-06 3.8E-11 85.2 8.2 96 92-203 72-170 (262)
223 3a27_A TYW2, uncharacterized p 98.3 9.5E-07 3.2E-11 85.9 7.6 102 92-207 119-222 (272)
224 2igt_A SAM dependent methyltra 98.3 8.1E-07 2.8E-11 89.1 7.0 110 92-207 153-275 (332)
225 2b78_A Hypothetical protein SM 98.2 1.2E-06 4.2E-11 89.4 7.2 111 92-207 212-334 (385)
226 2qm3_A Predicted methyltransfe 98.2 5.2E-06 1.8E-10 84.3 11.6 106 90-207 170-280 (373)
227 3gru_A Dimethyladenosine trans 98.2 2.6E-06 8.8E-11 84.0 8.2 86 80-175 38-123 (295)
228 4dmg_A Putative uncharacterize 98.2 7.6E-06 2.6E-10 83.9 11.8 110 93-211 215-333 (393)
229 2ih2_A Modification methylase 98.2 3.1E-06 1.1E-10 86.7 8.5 116 92-223 39-183 (421)
230 3sso_A Methyltransferase; macr 98.2 5.1E-07 1.8E-11 92.3 2.6 102 92-206 216-326 (419)
231 2yxl_A PH0851 protein, 450AA l 98.2 1E-05 3.5E-10 84.3 12.3 109 92-207 259-392 (450)
232 3tm4_A TRNA (guanine N2-)-meth 98.2 7.7E-06 2.6E-10 83.1 11.0 106 92-205 217-330 (373)
233 3dou_A Ribosomal RNA large sub 98.1 7.5E-06 2.6E-10 75.3 9.8 44 82-129 14-58 (191)
234 1zq9_A Probable dimethyladenos 98.1 6.5E-06 2.2E-10 80.6 9.6 86 81-178 17-105 (285)
235 1uwv_A 23S rRNA (uracil-5-)-me 98.1 8.3E-06 2.8E-10 84.6 10.9 120 70-204 264-388 (433)
236 2h00_A Methyltransferase 10 do 98.1 4.7E-06 1.6E-10 79.4 8.0 83 92-178 65-152 (254)
237 1wxx_A TT1595, hypothetical pr 98.1 2.7E-06 9.3E-11 86.7 6.5 113 92-210 209-331 (382)
238 2as0_A Hypothetical protein PH 98.1 1.2E-05 4.1E-10 82.2 10.8 114 92-210 217-341 (396)
239 3tqs_A Ribosomal RNA small sub 98.1 6.8E-06 2.3E-10 79.3 8.1 54 91-148 28-81 (255)
240 2h1r_A Dimethyladenosine trans 98.1 8.4E-06 2.9E-10 80.3 8.7 75 91-177 41-117 (299)
241 3c0k_A UPF0064 protein YCCW; P 98.0 1.1E-05 3.6E-10 82.6 9.6 109 92-207 220-342 (396)
242 2p41_A Type II methyltransfera 98.0 5.7E-06 2E-10 81.9 7.2 99 93-205 83-192 (305)
243 3v97_A Ribosomal RNA large sub 98.0 3.6E-06 1.2E-10 92.5 5.9 106 92-205 539-658 (703)
244 3m6w_A RRNA methylase; rRNA me 98.0 1.2E-05 4E-10 84.1 9.4 107 92-204 101-229 (464)
245 2frx_A Hypothetical protein YE 98.0 1.1E-05 3.8E-10 84.7 9.2 107 92-205 117-247 (479)
246 2jjq_A Uncharacterized RNA met 98.0 3.8E-05 1.3E-09 79.5 13.1 95 92-202 290-385 (425)
247 1sqg_A SUN protein, FMU protei 98.0 1.8E-05 6.3E-10 81.8 10.6 108 92-207 246-377 (429)
248 1qam_A ERMC' methyltransferase 98.0 2.4E-05 8.1E-10 74.7 9.7 60 81-144 19-78 (244)
249 3m4x_A NOL1/NOP2/SUN family pr 98.0 2E-05 7E-10 82.2 9.8 107 92-204 105-234 (456)
250 3fut_A Dimethyladenosine trans 97.9 1.7E-05 5.9E-10 77.1 8.4 51 92-148 47-97 (271)
251 1m6y_A S-adenosyl-methyltransf 97.9 1.3E-05 4.5E-10 79.2 7.7 79 92-174 26-106 (301)
252 3bt7_A TRNA (uracil-5-)-methyl 97.9 5.9E-05 2E-09 76.4 12.7 64 72-140 194-257 (369)
253 3ftd_A Dimethyladenosine trans 97.9 3.1E-05 1.1E-09 74.3 9.7 55 80-137 19-73 (249)
254 2yx1_A Hypothetical protein MJ 97.9 2.2E-05 7.6E-10 78.5 8.7 98 92-208 195-295 (336)
255 2okc_A Type I restriction enzy 97.8 5.2E-05 1.8E-09 78.7 8.8 124 92-223 171-327 (445)
256 3uzu_A Ribosomal RNA small sub 97.7 4.3E-05 1.5E-09 74.6 7.4 48 91-138 41-88 (279)
257 3k6r_A Putative transferase PH 97.7 9.4E-05 3.2E-09 72.2 8.2 100 93-204 126-225 (278)
258 2r6z_A UPF0341 protein in RSP 97.6 5.4E-05 1.9E-09 73.0 6.4 80 93-178 84-173 (258)
259 2qfm_A Spermine synthase; sper 97.6 8.4E-05 2.9E-09 75.0 7.5 46 92-140 188-233 (364)
260 3k0b_A Predicted N6-adenine-sp 97.6 0.0002 6.9E-09 73.3 10.5 106 93-205 202-351 (393)
261 3ldg_A Putative uncharacterize 97.6 0.0002 6.7E-09 73.1 10.2 105 93-205 195-344 (384)
262 2xyq_A Putative 2'-O-methyl tr 97.6 0.00033 1.1E-08 68.7 11.2 94 92-207 63-174 (290)
263 1qyr_A KSGA, high level kasuga 97.6 5.6E-05 1.9E-09 72.7 5.6 45 92-140 21-65 (252)
264 3ll7_A Putative methyltransfer 97.6 4.5E-05 1.5E-09 78.4 4.6 72 93-173 94-170 (410)
265 2b9e_A NOL1/NOP2/SUN domain fa 97.5 0.0004 1.4E-08 68.7 11.0 49 92-141 102-150 (309)
266 3ldu_A Putative methylase; str 97.5 0.00022 7.4E-09 72.8 9.3 106 93-205 196-345 (385)
267 2dul_A N(2),N(2)-dimethylguano 97.4 0.00023 7.8E-09 72.5 8.0 46 93-140 48-93 (378)
268 3s1s_A Restriction endonucleas 97.4 0.00087 3E-08 73.8 12.5 127 92-223 321-486 (878)
269 1yub_A Ermam, rRNA methyltrans 97.4 1.4E-05 4.7E-10 76.2 -1.8 51 85-139 22-72 (245)
270 2ar0_A M.ecoki, type I restric 97.4 0.00036 1.2E-08 74.4 9.0 126 92-223 169-332 (541)
271 3b5i_A S-adenosyl-L-methionine 97.2 0.0013 4.3E-08 66.9 10.4 101 78-181 33-165 (374)
272 3axs_A Probable N(2),N(2)-dime 97.2 0.00065 2.2E-08 69.4 7.7 101 93-204 53-158 (392)
273 3o4f_A Spermidine synthase; am 97.1 0.0011 3.6E-08 65.1 8.2 106 92-203 83-197 (294)
274 3v97_A Ribosomal RNA large sub 97.1 0.0024 8.2E-08 70.1 11.9 111 93-205 191-348 (703)
275 2oyr_A UPF0341 protein YHIQ; a 97.0 0.001 3.4E-08 64.2 6.7 42 94-139 90-131 (258)
276 3cvo_A Methyltransferase-like 97.0 0.0022 7.4E-08 59.5 8.5 44 93-141 31-74 (202)
277 2zig_A TTHA0409, putative modi 96.8 0.0019 6.6E-08 63.1 7.5 45 92-140 235-279 (297)
278 3khk_A Type I restriction-modi 96.8 0.0012 4E-08 70.4 6.2 126 93-223 245-416 (544)
279 4gqb_A Protein arginine N-meth 96.8 0.0015 5.2E-08 70.5 7.1 131 57-199 316-462 (637)
280 2efj_A 3,7-dimethylxanthine me 96.8 0.008 2.7E-07 61.1 11.9 86 93-181 53-164 (384)
281 3evf_A RNA-directed RNA polyme 96.7 0.0018 6.2E-08 62.6 6.2 111 81-202 63-182 (277)
282 4auk_A Ribosomal RNA large sub 96.7 0.0093 3.2E-07 60.2 11.4 113 92-223 211-325 (375)
283 3lkd_A Type I restriction-modi 96.6 0.011 3.7E-07 62.9 11.8 128 92-223 221-378 (542)
284 3gcz_A Polyprotein; flavivirus 96.5 0.0018 6.1E-08 62.8 4.6 112 81-202 79-199 (282)
285 2qy6_A UPF0209 protein YFCK; s 96.5 0.002 6.7E-08 62.0 4.8 110 92-202 60-211 (257)
286 1wg8_A Predicted S-adenosylmet 96.5 0.0063 2.2E-07 59.1 8.3 74 92-173 22-96 (285)
287 3ua3_A Protein arginine N-meth 96.5 0.0028 9.5E-08 68.8 6.2 101 93-200 410-530 (745)
288 1m6e_X S-adenosyl-L-methionnin 96.4 0.0021 7.1E-08 64.8 4.3 87 92-181 51-154 (359)
289 2k4m_A TR8_protein, UPF0146 pr 96.2 0.0018 6.1E-08 56.9 2.5 89 93-212 36-125 (153)
290 2vz8_A Fatty acid synthase; tr 95.7 0.0022 7.6E-08 79.5 0.7 106 93-205 1241-1349(2512)
291 1rjd_A PPM1P, carboxy methyl t 95.6 0.069 2.4E-06 53.1 11.1 111 93-208 98-236 (334)
292 3eld_A Methyltransferase; flav 95.5 0.015 5E-07 56.8 5.6 37 92-130 81-117 (300)
293 1g60_A Adenine-specific methyl 95.4 0.034 1.2E-06 53.1 7.8 45 92-140 212-256 (260)
294 3c6k_A Spermine synthase; sper 95.0 0.064 2.2E-06 54.3 8.9 46 92-140 205-250 (381)
295 3ufb_A Type I restriction-modi 94.9 0.093 3.2E-06 55.5 10.0 126 92-223 217-382 (530)
296 2wk1_A NOVP; transferase, O-me 94.0 0.17 5.7E-06 49.2 8.9 104 91-205 105-244 (282)
297 2uyo_A Hypothetical protein ML 93.9 0.45 1.5E-05 46.7 11.8 112 93-210 103-223 (310)
298 3tka_A Ribosomal RNA small sub 93.3 0.21 7.1E-06 49.7 8.3 56 80-136 45-100 (347)
299 1i4w_A Mitochondrial replicati 92.4 0.25 8.5E-06 49.5 7.5 54 93-149 59-112 (353)
300 1zkd_A DUF185; NESG, RPR58, st 91.4 0.95 3.3E-05 45.8 10.5 85 86-180 74-163 (387)
301 3p8z_A Mtase, non-structural p 90.4 0.29 9.8E-06 46.3 5.0 47 81-129 67-113 (267)
302 3lkz_A Non-structural protein 89.7 0.28 9.4E-06 47.8 4.5 47 81-129 83-129 (321)
303 1boo_A Protein (N-4 cytosine-s 88.8 1 3.4E-05 44.3 8.0 47 92-142 252-298 (323)
304 2oo3_A Protein involved in cat 87.7 1.5 5E-05 42.5 8.1 125 69-206 75-200 (283)
305 4fzv_A Putative methyltransfer 86.1 0.58 2E-05 46.9 4.5 46 92-139 148-193 (359)
306 2px2_A Genome polyprotein [con 84.1 0.58 2E-05 44.7 3.2 32 81-113 62-94 (269)
307 2c7p_A Modification methylase 83.7 2.9 9.8E-05 41.2 8.2 74 93-179 11-84 (327)
308 2py6_A Methyltransferase FKBM; 83.7 1.7 5.7E-05 44.2 6.7 48 92-140 226-274 (409)
309 1eg2_A Modification methylase 81.8 2 6.7E-05 42.2 6.1 47 92-142 242-291 (319)
310 2dph_A Formaldehyde dismutase; 76.8 7.5 0.00026 38.8 8.8 65 67-137 164-229 (398)
311 4f3n_A Uncharacterized ACR, CO 75.4 5.2 0.00018 40.9 7.1 47 93-139 138-187 (432)
312 3m6i_A L-arabinitol 4-dehydrog 75.2 20 0.00068 35.0 11.3 44 92-137 179-223 (363)
313 1kol_A Formaldehyde dehydrogen 72.9 17 0.00057 36.1 10.2 65 67-137 164-229 (398)
314 3r24_A NSP16, 2'-O-methyl tran 71.3 2.8 9.6E-05 40.9 3.7 34 92-128 109-148 (344)
315 4dvj_A Putative zinc-dependent 70.4 27 0.00092 34.2 11.0 95 93-203 172-269 (363)
316 3iei_A Leucine carboxyl methyl 69.6 50 0.0017 32.4 12.5 115 93-209 91-234 (334)
317 1g55_A DNA cytosine methyltran 69.1 6.3 0.00022 38.8 5.9 47 93-140 2-48 (343)
318 3fpc_A NADP-dependent alcohol 68.1 16 0.00055 35.5 8.7 64 68-137 146-210 (352)
319 3s2e_A Zinc-containing alcohol 67.0 22 0.00076 34.3 9.4 62 69-137 147-209 (340)
320 1f8f_A Benzyl alcohol dehydrog 65.6 17 0.00059 35.6 8.4 44 92-137 190-234 (371)
321 3two_A Mannitol dehydrogenase; 61.2 18 0.00063 35.0 7.6 62 69-137 157-219 (348)
322 2zwa_A Leucine carboxyl methyl 60.1 51 0.0018 35.4 11.5 114 93-208 108-258 (695)
323 1pl8_A Human sorbitol dehydrog 57.7 28 0.00097 33.8 8.3 44 92-137 171-215 (356)
324 3jv7_A ADH-A; dehydrogenase, n 56.6 22 0.00076 34.3 7.3 65 69-137 150-215 (345)
325 1uuf_A YAHK, zinc-type alcohol 55.9 37 0.0013 33.3 8.8 62 69-137 175-237 (369)
326 2b5w_A Glucose dehydrogenase; 52.9 31 0.0011 33.6 7.6 66 70-137 148-221 (357)
327 4ej6_A Putative zinc-binding d 51.9 42 0.0014 32.9 8.4 44 92-137 182-226 (370)
328 3g7u_A Cytosine-specific methy 50.3 25 0.00084 35.1 6.4 79 94-179 3-84 (376)
329 2h6e_A ADH-4, D-arabinose 1-de 49.9 48 0.0016 31.9 8.4 65 69-137 147-215 (344)
330 1rjw_A ADH-HT, alcohol dehydro 49.5 72 0.0025 30.6 9.6 62 69-137 145-207 (339)
331 3uog_A Alcohol dehydrogenase; 49.5 30 0.001 33.8 6.9 62 70-137 170-232 (363)
332 3ip1_A Alcohol dehydrogenase, 49.1 31 0.0011 34.2 7.1 44 92-137 213-257 (404)
333 1piw_A Hypothetical zinc-type 48.5 39 0.0013 32.8 7.6 62 69-137 160-222 (360)
334 3iht_A S-adenosyl-L-methionine 48.4 48 0.0016 29.1 7.0 53 67-126 20-72 (174)
335 1e3j_A NADP(H)-dependent ketos 48.2 70 0.0024 30.8 9.3 43 92-137 168-211 (352)
336 3ps9_A TRNA 5-methylaminomethy 46.9 20 0.00068 38.4 5.5 41 93-133 67-120 (676)
337 1e3i_A Alcohol dehydrogenase, 46.7 45 0.0016 32.5 7.7 44 92-137 195-239 (376)
338 1vj0_A Alcohol dehydrogenase, 45.7 81 0.0028 30.8 9.4 59 73-137 179-239 (380)
339 1p0f_A NADP-dependent alcohol 45.5 40 0.0014 32.9 7.1 44 92-137 191-235 (373)
340 3uko_A Alcohol dehydrogenase c 45.3 32 0.0011 33.7 6.3 44 92-137 193-237 (378)
341 1cdo_A Alcohol dehydrogenase; 45.0 50 0.0017 32.2 7.7 44 92-137 192-236 (374)
342 2jhf_A Alcohol dehydrogenase E 44.5 51 0.0017 32.1 7.7 44 92-137 191-235 (374)
343 3nx4_A Putative oxidoreductase 41.6 41 0.0014 32.0 6.3 63 70-137 124-190 (324)
344 2fzw_A Alcohol dehydrogenase c 41.6 52 0.0018 32.1 7.2 44 92-137 190-234 (373)
345 3qv2_A 5-cytosine DNA methyltr 40.8 44 0.0015 32.6 6.4 48 92-140 9-57 (327)
346 3mag_A VP39; methylated adenin 40.5 41 0.0014 32.5 5.9 38 92-129 60-99 (307)
347 3me5_A Cytosine-specific methy 39.3 65 0.0022 33.2 7.7 44 93-139 88-131 (482)
348 4a2c_A Galactitol-1-phosphate 39.3 1.2E+02 0.004 28.9 9.3 46 90-137 158-204 (346)
349 2hcy_A Alcohol dehydrogenase 1 39.0 69 0.0023 30.8 7.6 62 69-137 150-213 (347)
350 4e7p_A Response regulator; DNA 38.1 1.4E+02 0.0049 23.9 8.6 81 118-204 20-101 (150)
351 3qwb_A Probable quinone oxidor 37.9 48 0.0017 31.7 6.2 43 92-137 148-192 (334)
352 3goh_A Alcohol dehydrogenase, 36.4 51 0.0017 31.2 6.1 61 69-137 123-184 (315)
353 4eez_A Alcohol dehydrogenase 1 36.4 87 0.003 29.9 7.8 45 92-138 163-208 (348)
354 1tt5_A APPBP1, amyloid protein 36.2 1.9E+02 0.0066 30.0 10.8 34 94-128 33-66 (531)
355 3vyw_A MNMC2; tRNA wobble urid 35.5 29 0.00098 33.8 4.0 34 93-126 97-134 (308)
356 1jvb_A NAD(H)-dependent alcoho 35.3 1.4E+02 0.0048 28.5 9.2 62 69-137 151-215 (347)
357 1h2b_A Alcohol dehydrogenase; 34.3 1.4E+02 0.0048 28.8 9.0 43 92-137 186-230 (359)
358 1pqw_A Polyketide synthase; ro 34.1 95 0.0032 26.8 7.1 42 92-136 38-81 (198)
359 2d8a_A PH0655, probable L-thre 33.8 1.2E+02 0.0039 29.2 8.3 44 92-137 167-211 (348)
360 3t8y_A CHEB, chemotaxis respon 33.4 1.8E+02 0.006 24.0 8.5 85 117-207 24-108 (164)
361 4a94_C Carboxypeptidase inhibi 33.3 25 0.00084 23.7 2.1 22 259-281 7-28 (53)
362 4h0n_A DNMT2; SAH binding, tra 32.9 64 0.0022 31.4 6.2 47 93-140 3-49 (333)
363 3pvc_A TRNA 5-methylaminomethy 32.7 45 0.0015 35.7 5.5 35 92-126 58-102 (689)
364 1iz0_A Quinone oxidoreductase; 32.6 69 0.0024 30.1 6.3 62 69-137 106-169 (302)
365 1v3u_A Leukotriene B4 12- hydr 31.5 1.5E+02 0.0051 28.1 8.6 63 69-137 125-189 (333)
366 3o8q_A Shikimate 5-dehydrogena 30.8 2.3E+02 0.0078 26.7 9.6 38 90-131 123-163 (281)
367 3tum_A Shikimate dehydrogenase 30.6 2E+02 0.007 26.9 9.1 38 90-130 122-161 (269)
368 3tnl_A Shikimate dehydrogenase 29.9 1.4E+02 0.0048 28.8 8.0 34 90-127 151-187 (315)
369 3ubt_Y Modification methylase 29.8 98 0.0034 29.4 6.9 42 94-138 1-42 (331)
370 2eih_A Alcohol dehydrogenase; 29.3 77 0.0026 30.4 6.1 62 70-137 147-210 (343)
371 3ilh_A Two component response 28.9 1.7E+02 0.0058 23.0 7.4 73 118-191 9-84 (146)
372 2cf5_A Atccad5, CAD, cinnamyl 28.6 1.3E+02 0.0044 29.0 7.6 59 70-135 161-221 (357)
373 4b7c_A Probable oxidoreductase 28.5 1.7E+02 0.0057 27.8 8.3 61 68-134 128-190 (336)
374 3jyn_A Quinone oxidoreductase; 27.9 1.5E+02 0.0052 27.9 7.9 43 92-137 140-184 (325)
375 2c0c_A Zinc binding alcohol de 26.6 1.5E+02 0.0051 28.7 7.7 63 69-137 143-207 (362)
376 3pwz_A Shikimate dehydrogenase 26.0 2.1E+02 0.0071 26.8 8.3 37 91-131 118-157 (272)
377 1yb5_A Quinone oxidoreductase; 25.8 1.1E+02 0.0039 29.4 6.6 63 69-137 150-214 (351)
378 4dup_A Quinone oxidoreductase; 25.3 1E+02 0.0035 29.7 6.2 62 70-137 148-211 (353)
379 3c85_A Putative glutathione-re 24.4 1.1E+02 0.0036 26.2 5.5 40 93-136 39-81 (183)
380 3tqh_A Quinone oxidoreductase; 24.2 2.2E+02 0.0075 26.7 8.3 60 70-137 134-195 (321)
381 3gms_A Putative NADPH:quinone 24.1 1.2E+02 0.0041 28.9 6.4 43 92-137 144-188 (340)
382 3kht_A Response regulator; PSI 23.8 1.6E+02 0.0054 23.4 6.2 70 119-194 6-75 (144)
383 2j3h_A NADP-dependent oxidored 23.7 1.9E+02 0.0064 27.4 7.7 62 69-136 135-198 (345)
384 2dq4_A L-threonine 3-dehydroge 23.5 76 0.0026 30.4 4.8 44 92-137 164-208 (343)
385 3kyj_B CHEY6 protein, putative 23.0 2.3E+02 0.008 22.3 7.2 63 117-180 12-74 (145)
386 1yqd_A Sinapyl alcohol dehydro 22.6 2.2E+02 0.0076 27.4 8.1 41 92-135 187-228 (366)
387 3iup_A Putative NADPH:quinone 22.5 90 0.0031 30.5 5.2 42 93-137 171-215 (379)
388 3eul_A Possible nitrate/nitrit 22.4 1.2E+02 0.0041 24.4 5.3 82 117-204 14-96 (152)
389 3fbg_A Putative arginate lyase 22.2 2.9E+02 0.0099 26.2 8.8 43 92-137 150-194 (346)
390 1tt7_A YHFP; alcohol dehydroge 22.1 1.1E+02 0.0037 29.0 5.5 40 95-137 153-194 (330)
391 2qrv_A DNA (cytosine-5)-methyl 21.9 1.5E+02 0.005 28.3 6.3 45 92-139 15-61 (295)
392 3heb_A Response regulator rece 21.8 2.4E+02 0.0081 22.5 7.1 72 119-194 5-83 (152)
393 2j8z_A Quinone oxidoreductase; 21.0 2.4E+02 0.008 27.0 7.8 63 69-137 142-206 (354)
394 1k68_A Phytochrome response re 20.9 2.9E+02 0.0098 21.2 8.1 62 119-180 3-69 (140)
395 4g65_A TRK system potassium up 20.9 1.5E+02 0.0052 30.0 6.6 43 93-138 3-46 (461)
396 4eye_A Probable oxidoreductase 20.8 2E+02 0.0069 27.4 7.3 62 70-137 140-203 (342)
397 3da8_A Probable 5'-phosphoribo 20.0 1.8E+02 0.006 26.5 6.2 101 92-208 11-122 (215)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=3.1e-14 Score=138.55 Aligned_cols=147 Identities=16% Similarity=0.256 Sum_probs=107.9
Q ss_pred ccCHHHHHHH--HHhcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHH
Q 012511 56 KYRDDETIAY--VASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRA 133 (462)
Q Consensus 56 ~y~~~e~~AY--la~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~ 133 (462)
.+++.-+..| ++.|.-+.|..+...+..|..+... .+.+|||+|||+|..+.++++.++....+|+|||+|+.|++.
T Consensus 33 ~F~~~va~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~-~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~ 111 (261)
T 4gek_A 33 TFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQ-PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIER 111 (261)
T ss_dssp CCCHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHCC-TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHH
T ss_pred eeCcchhhhhhhhHhhcCCCHHHHHHHHHHHHHHhCC-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHH
Confidence 3555555555 3556667799999988888877532 347999999999999999988775445699999999999999
Q ss_pred HHHhhcCCCC---CCceecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 134 GQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 134 Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
|++.+..... +.++.. ++. .++ .+.||+|+++++|++++ +.++..+++++.+. |||.|||.|+..+
T Consensus 112 A~~~~~~~~~~~~v~~~~~-----D~~-~~~--~~~~d~v~~~~~l~~~~-~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 112 CRRHIDAYKAPTPVDVIEG-----DIR-DIA--IENASMVVLNFTLQFLE-PSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp HHHHHHTSCCSSCEEEEES-----CTT-TCC--CCSEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred HHHHHHhhccCceEEEeec-----ccc-ccc--ccccccceeeeeeeecC-chhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 9998865432 222221 222 233 35699999999999997 66666666666654 8999999998776
Q ss_pred CchH
Q 012511 209 QGSS 212 (462)
Q Consensus 209 ~Gf~ 212 (462)
....
T Consensus 183 ~~~~ 186 (261)
T 4gek_A 183 EDAK 186 (261)
T ss_dssp SSHH
T ss_pred CCHH
Confidence 6543
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.33 E-value=5.4e-12 Score=117.81 Aligned_cols=105 Identities=20% Similarity=0.289 Sum_probs=76.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..++.. ..+++++|+|+.|++.++..+. .++.++.. ++. .++.. ++||+|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~-----d~~-~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA----GRTVYGIEPSREMRMIAKEKLP--KEFSITEG-----DFL-SFEVP-TSIDTIV 111 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT----TCEEEEECSCHHHHHHHHHHSC--TTCCEESC-----CSS-SCCCC-SCCSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC----CCeEEEEeCCHHHHHHHHHhCC--CceEEEeC-----Chh-hcCCC-CCeEEEE
Confidence 4579999999999998888873 4589999999999999998876 23333322 122 13333 7999999
Q ss_pred ecccccCCCCHHH--HHHHHHHHHhcCCCEEEEEecCCCCc
Q 012511 172 ASYVLGEVPSLQD--RITIVRQLWDLTRDVLVLVEPGTPQG 210 (462)
Q Consensus 172 as~vL~el~~~~~--r~~~i~~Lw~~~gG~LVlVEpGtp~G 210 (462)
+.++|+++++... .+..+.++++ +||.|++.++..+..
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~ 151 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLN-KGGKIVFADTIFADQ 151 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSC-TTCEEEEEEECBSSH
T ss_pred ECcchhcCChHHHHHHHHHHHHhcC-CCCEEEEEeccccCh
Confidence 9999999985443 3344444443 799999999765443
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.32 E-value=4.6e-12 Score=121.78 Aligned_cols=109 Identities=14% Similarity=0.274 Sum_probs=83.1
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
..+.+|||+|||+|..+..++... .+|+++|+|+.|++.|++.+.... ++.++.. ++. .++..+++||
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~-----d~~-~l~~~~~~fD 105 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV----KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQG-----DAE-QMPFTDERFH 105 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS----SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC-----CC--CCCSCTTCEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC----CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe-----cHH-hCCCCCCCEE
Confidence 356899999999999998888754 389999999999999998775322 2222221 222 2445567999
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCc
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQG 210 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~G 210 (462)
+|+++++|+++++....+..+.++++ |||.|+++++..+..
T Consensus 106 ~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~ 146 (260)
T 1vl5_A 106 IVTCRIAAHHFPNPASFVSEAYRVLK-KGGQLLLVDNSAPEN 146 (260)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEBCSS
T ss_pred EEEEhhhhHhcCCHHHHHHHHHHHcC-CCCEEEEEEcCCCCC
Confidence 99999999999988777777777776 699999998876654
No 4
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.31 E-value=4.8e-12 Score=124.31 Aligned_cols=119 Identities=17% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCCeEEEECCchhHHHHH----HHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceec---chhHhhhhhc--cCC
Q 012511 92 SPAKVLDFGAGTGSAFWA----LREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHS---YNSIQALNKD--ISK 162 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~a----l~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~---~~~~~~l~~~--l~~ 162 (462)
++.+|||||||+|..+.. +....+.....++++|+|++|++.|++.+.....++.+.. ......+... .+.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 457999999999976543 2233332111459999999999999988754322221110 0011111100 012
Q ss_pred CCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCch
Q 012511 163 SEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGS 211 (462)
Q Consensus 163 ~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf 211 (462)
..++||+|+++++|+++++....+..+.++++ |||.|+|++.....++
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~ 179 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLG-TNAKMLIIVVSGSSGW 179 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEECTTSHH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcC-CCcEEEEEEecCCccH
Confidence 45789999999999999988887777777776 6999999987644333
No 5
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.29 E-value=1.9e-11 Score=113.83 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=80.2
Q ss_pred CCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCccc
Q 012511 89 PGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 89 p~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
+...+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|+..+....++.++.. ++.. ++ ..++||
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-----d~~~-~~-~~~~fD 116 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPH----CKRLTVIDVMPRAIGRACQRTKRWSHISWAAT-----DILQ-FS-TAELFD 116 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGG----EEEEEEEESCHHHHHHHHHHTTTCSSEEEEEC-----CTTT-CC-CSCCEE
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHhcccCCCeEEEEc-----chhh-CC-CCCCcc
Confidence 3345679999999999998888764 35899999999999999998876444333322 2221 22 467899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
+|+++++|+++++......+++++.+. +||.|++..+.
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999999999999877665666666554 79999997753
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.28 E-value=1.2e-11 Score=120.11 Aligned_cols=117 Identities=20% Similarity=0.244 Sum_probs=84.5
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~ 161 (462)
..|....+ ...+|||+|||+|..+..+++. ..+|++||+|+.|++.|++ ..++.++.. +. ..++
T Consensus 31 ~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~----~~~v~gvD~s~~ml~~a~~----~~~v~~~~~-----~~-e~~~ 94 (257)
T 4hg2_A 31 RWLGEVAP--ARGDALDCGCGSGQASLGLAEF----FERVHAVDPGEAQIRQALR----HPRVTYAVA-----PA-EDTG 94 (257)
T ss_dssp HHHHHHSS--CSSEEEEESCTTTTTHHHHHTT----CSEEEEEESCHHHHHTCCC----CTTEEEEEC-----CT-TCCC
T ss_pred HHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh----CCEEEEEeCcHHhhhhhhh----cCCceeehh-----hh-hhhc
Confidence 33444444 2469999999999988888864 4589999999999987643 233333322 12 2345
Q ss_pred CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHH
Q 012511 162 KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQ 216 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~ 216 (462)
..+++||+|+++.+||++. ....+..+.++++ |||.|+++..+.+.-...+..
T Consensus 95 ~~~~sfD~v~~~~~~h~~~-~~~~~~e~~rvLk-pgG~l~~~~~~~~~~~~~~~~ 147 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFD-LDRFWAELRRVAR-PGAVFAAVTYGLTRVDPEVDA 147 (257)
T ss_dssp CCSSCEEEEEECSCCTTCC-HHHHHHHHHHHEE-EEEEEEEEEECCCBCCHHHHH
T ss_pred ccCCcccEEEEeeehhHhh-HHHHHHHHHHHcC-CCCEEEEEECCCCCCCHHHHH
Confidence 5678999999999999985 7766777777776 799999999887766554433
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.28 E-value=6e-11 Score=111.84 Aligned_cols=110 Identities=17% Similarity=0.306 Sum_probs=81.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..++..++ ..+++++|+|+.|++.|+..+....++.++.. ++. .++.. ++||+|+
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-----d~~-~~~~~-~~fD~v~ 114 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYP--EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEA-----DYS-KYDFE-EKYDMVV 114 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHTCSCTTEEEEES-----CTT-TCCCC-SCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHhhccCCCEEEEeC-----chh-ccCCC-CCceEEE
Confidence 468999999999999999888775 46899999999999999998876443333322 222 12323 7899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
++++|++++ ...+..+++++.+. |||.|++.++..+...
T Consensus 115 ~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 155 (234)
T 3dtn_A 115 SALSIHHLE-DEDKKELYKRSYSILKESGIFINADLVHGETA 155 (234)
T ss_dssp EESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEECBCSSH
T ss_pred EeCccccCC-HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCh
Confidence 999999996 55444444444442 7999999998766554
No 8
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.26 E-value=3e-11 Score=117.80 Aligned_cols=117 Identities=22% Similarity=0.209 Sum_probs=84.7
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQA 155 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~ 155 (462)
+.+..+...++. ++.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.+..... +.++.. +
T Consensus 56 ~~l~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d 125 (285)
T 4htf_A 56 QDLDRVLAEMGP-QKLRVLDAGGGEGQTAIKMAER----GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHC-----A 125 (285)
T ss_dssp HHHHHHHHHTCS-SCCEEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEES-----C
T ss_pred HHHHHHHHhcCC-CCCEEEEeCCcchHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEc-----C
Confidence 345555555543 3679999999999998888874 35899999999999999998865431 112221 1
Q ss_pred hhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 156 LNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 156 l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+....+...++||+|++.++|+++++....+..+.++++ |||.|++..+.
T Consensus 126 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 175 (285)
T 4htf_A 126 AQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLR-PGGVLSLMFYN 175 (285)
T ss_dssp GGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEB
T ss_pred HHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcC-CCeEEEEEEeC
Confidence 221111346799999999999999988776666666665 69999998874
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.25 E-value=4.2e-11 Score=114.40 Aligned_cols=114 Identities=21% Similarity=0.234 Sum_probs=84.2
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~ 161 (462)
..+...++...+.+|||+|||+|..+..++... ..+|+++|+|+.|++.|++.+. ..++.++.. ++. .++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~-----d~~-~~~ 103 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG---AKKVLGIDLSERMLTEAKRKTT-SPVVCYEQK-----AIE-DIA 103 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT---CSEEEEEESCHHHHHHHHHHCC-CTTEEEEEC-----CGG-GCC
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcC---CCEEEEEECCHHHHHHHHHhhc-cCCeEEEEc-----chh-hCC
Confidence 334444555567899999999999988888742 2389999999999999998876 223333322 222 234
Q ss_pred CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 162 KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
...++||+|+++++|+++++....+..+.++++ +||.|++..+.
T Consensus 104 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 147 (253)
T 3g5l_A 104 IEPDAYNVVLSSLALHYIASFDDICKKVYINLK-SSGSFIFSVEH 147 (253)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred CCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcC-CCcEEEEEeCC
Confidence 456799999999999999887777777777776 69999987653
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.25 E-value=1.3e-11 Score=118.07 Aligned_cols=118 Identities=12% Similarity=0.223 Sum_probs=82.7
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~ 161 (462)
..+...++...+.+|||+|||+|..+..++..++ .+|+++|+|+.|++.|+..+....++.++.. ++. .++
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-----d~~-~~~ 115 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYG---AHTHGIDICSNIVNMANERVSGNNKIIFEAN-----DIL-TKE 115 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEEC-----CTT-TCC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC-----ccc-cCC
Confidence 3444444444567999999999999988887542 5899999999999999988765422222221 222 234
Q ss_pred CCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 162 KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
...++||+|++.++|++++ ..+...+++++.+. |||.|++.++..+.
T Consensus 116 ~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 116 FPENNFDLIYSRDAILALS-LENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp CCTTCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred CCCCcEEEEeHHHHHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 4567999999999999994 34444444444442 79999999976554
No 11
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.24 E-value=7.8e-12 Score=116.49 Aligned_cols=101 Identities=14% Similarity=0.008 Sum_probs=70.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC--------------CCCCCceecchhHhhhh
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG--------------PKDLPLIHSYNSIQALN 157 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~--------------~~~~~~i~~~~~~~~l~ 157 (462)
.+.+|||+|||+|..+..+++. ..+|++||+|+.|++.|++.... ..++.++.. ++.
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~----g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----d~~ 92 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ----GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG-----DFF 92 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH----CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE-----CCS
T ss_pred CCCEEEEeCCCCcHhHHHHHHC----CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC-----ccc
Confidence 4679999999999988877763 34899999999999999987642 122222221 121
Q ss_pred hccCCCC-CcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEE
Q 012511 158 KDISKSE-REHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLV 203 (462)
Q Consensus 158 ~~l~~~~-~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlV 203 (462)
.++... ++||+|++..+|++++ ...+..+++.+.+. |||.++++
T Consensus 93 -~l~~~~~~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 93 -ALTARDIGHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp -SSTHHHHHSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred -cCCcccCCCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 122222 6899999999999997 55555555555443 79985444
No 12
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.24 E-value=4.3e-11 Score=110.86 Aligned_cols=116 Identities=10% Similarity=0.128 Sum_probs=83.8
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhh
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNK 158 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~ 158 (462)
..+...++. ++.+|||+|||+|..+..++.. + ..+++++|+|+.|++.|+..+.... ++.++.. ++.
T Consensus 34 ~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~-~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~- 103 (219)
T 3dlc_A 34 ENIINRFGI-TAGTCIDIGSGPGALSIALAKQ-S--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQG-----DVH- 103 (219)
T ss_dssp HHHHHHHCC-CEEEEEEETCTTSHHHHHHHHH-S--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-----BTT-
T ss_pred HHHHHhcCC-CCCEEEEECCCCCHHHHHHHHc-C--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEc-----CHH-
Confidence 334444432 3459999999999998888875 2 4689999999999999999876432 1222221 222
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
.++...++||+|+++++|+++++....+..+.++++ +||.|++.++-..
T Consensus 104 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 104 NIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILK-SGGKTYIGGGFGN 152 (219)
T ss_dssp BCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEECCSS
T ss_pred HCCCCcccccEEEECchHhhccCHHHHHHHHHHhCC-CCCEEEEEeccCc
Confidence 234456789999999999999887776777777775 6999999875443
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.23 E-value=4.2e-11 Score=115.64 Aligned_cols=121 Identities=16% Similarity=0.118 Sum_probs=87.8
Q ss_pred HHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHh
Q 012511 78 YRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQ 154 (462)
Q Consensus 78 ~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~ 154 (462)
.+++..+...++...+.+|||+|||+|..+..++...+ .+|+++|+|+.|++.++..+.... ++.++..
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~----- 118 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD---VRVTGISISRPQVNQANARATAAGLANRVTFSYA----- 118 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-----
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-----
Confidence 34455666666555668999999999999888877543 589999999999999998875432 1222221
Q ss_pred hhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 155 ALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 155 ~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
++. .++...++||+|++.++|+++++....+..+.++++ +||.|++.++...
T Consensus 119 d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~ 170 (273)
T 3bus_A 119 DAM-DLPFEDASFDAVWALESLHHMPDRGRALREMARVLR-PGGTVAIADFVLL 170 (273)
T ss_dssp CTT-SCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEE-EEEEEEEEEEEES
T ss_pred ccc-cCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcC-CCeEEEEEEeecc
Confidence 222 234456789999999999999887665555666654 6999999987543
No 14
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.23 E-value=6.7e-11 Score=112.68 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=80.4
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l 160 (462)
+..+...++...+.+|||+|||+|..+..++... ..+|+++|+|+.|++.|++.+....++.++.. ++. .+
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-----d~~-~~ 152 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL---YATTDLLEPVKHMLEEAKRELAGMPVGKFILA-----SME-TA 152 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH---CSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-----CGG-GC
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh---cCEEEEEeCCHHHHHHHHHHhccCCceEEEEc-----cHH-HC
Confidence 3444455554456899999999999888777643 34799999999999999988765322222221 222 23
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
+...++||+|+++++|++++ ..+...+++++.+. +||.|+|.++
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLT-DADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCeEEEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 44567899999999999996 34444445444443 7999999986
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.23 E-value=2.6e-11 Score=115.86 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=79.1
Q ss_pred HCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCC
Q 012511 87 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKS 163 (462)
Q Consensus 87 rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~ 163 (462)
.++...+.+|||+|||+|..+..++..++ .+++++|+|+.|++.|++.+.... ++.++.. ++. .++.
T Consensus 31 ~~~~~~~~~VLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~-----d~~-~~~~- 100 (256)
T 1nkv_A 31 VLRMKPGTRILDLGSGSGEMLCTWARDHG---ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-----DAA-GYVA- 100 (256)
T ss_dssp HTCCCTTCEEEEETCTTCHHHHHHHHHTC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-----CCT-TCCC-
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-----ChH-hCCc-
Confidence 34334557999999999999988887653 489999999999999998875432 2222221 222 1333
Q ss_pred CCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 164 EREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 164 ~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
.++||+|++..+++++++....+..+.++++ |||.|++.++.
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~ 142 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLK-PGGIMLIGEPY 142 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEE-EEEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcC-CCeEEEEecCc
Confidence 6789999999999999876665555555554 79999999864
No 16
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=3.2e-11 Score=115.27 Aligned_cols=113 Identities=16% Similarity=0.224 Sum_probs=82.3
Q ss_pred HHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCC
Q 012511 84 VRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKS 163 (462)
Q Consensus 84 L~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~ 163 (462)
+...++...+.+|||+|||+|..+..++..++ ..+|+++|+|+.|++.++.... ++.++.. ++. .++ .
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~v~~~D~s~~~~~~a~~~~~---~~~~~~~-----d~~-~~~-~ 92 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYG--VNVITGIDSDDDMLEKAADRLP---NTNFGKA-----DLA-TWK-P 92 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC--TTSEEEEESCHHHHHHHHHHST---TSEEEEC-----CTT-TCC-C
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhCC---CcEEEEC-----Chh-hcC-c
Confidence 33344444568999999999999998888764 3589999999999999988632 2333322 122 233 4
Q ss_pred CCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 164 EREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 164 ~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
.++||+|+++++|+++++....+..+.++++ +||.|++.+++...
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~ 137 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLE-SGGVLAVQMPDNLQ 137 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEE-EEEEEEEEEECCTT
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcC-CCeEEEEEeCCCCC
Confidence 5789999999999999876665555555554 69999999987643
No 17
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.22 E-value=2.4e-11 Score=114.75 Aligned_cols=104 Identities=20% Similarity=0.300 Sum_probs=77.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+++.. .+|+++|+|+.|++.|+..+.. ++.++.. ++.. + ...++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~----~~v~gvD~s~~~~~~a~~~~~~--~v~~~~~-----d~~~-~-~~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF----NDITCVEASEEAISHAQGRLKD--GITYIHS-----RFED-A-QLPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC----SCEEEEESCHHHHHHHHHHSCS--CEEEEES-----CGGG-C-CCSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC----CcEEEEeCCHHHHHHHHHhhhC--CeEEEEc-----cHHH-c-CcCCcccEEE
Confidence 45799999999999888877643 3799999999999999987754 3333322 1222 2 2457899999
Q ss_pred ecccccCCCCHHHHHHHHH-HHHhcCCCEEEEEecCCCC
Q 012511 172 ASYVLGEVPSLQDRITIVR-QLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~-~Lw~~~gG~LVlVEpGtp~ 209 (462)
+.++|+++++....+..+. ++++ |||.|++.++....
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~Lk-pgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLA-EGGRLFLVCPNANA 146 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEE-EEEEEEEEEECTTC
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcC-CCCEEEEEcCChHH
Confidence 9999999988766555555 5554 79999999986543
No 18
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.22 E-value=1.7e-10 Score=107.73 Aligned_cols=105 Identities=22% Similarity=0.240 Sum_probs=73.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-------CCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-------DLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-------~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.+.+|||+|||+|..+..+++..+ ..+|+++|+|+.|++.|++.+.... ++.++.. ++. ..+...
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~-~~~~~~ 100 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSF--FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG-----ALT-YQDKRF 100 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTT--CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC-----CTT-SCCGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCC--CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC-----Ccc-cccccC
Confidence 457999999999999998887543 3589999999999999999876432 1212211 121 122334
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
++||+|+++++|++++ ......+++.+.+. +||.+|++..
T Consensus 101 ~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLD-LSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CSCSEEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCcCEEeeHHHHHcCC-HHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 6899999999999996 44445556665553 6886666543
No 19
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=1.3e-10 Score=112.93 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=79.6
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
..+.+|||+|||+|..+..+++ ...+|+++|+|+.|++.++..+. ++.++.. +.. .++. .++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~-----d~~-~~~~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ----SGAEVLGTDNAATMIEKARQNYP---HLHFDVA-----DAR-NFRV-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHCT---TSCEEEC-----CTT-TCCC-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHhhCC---CCEEEEC-----Chh-hCCc-CCCcCEE
Confidence 3567999999999999988887 24689999999999999988752 2333322 122 2333 4689999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
+++++|+++++....+..+.++++ +||.|++..++...
T Consensus 122 ~~~~~l~~~~d~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 122 FSNAMLHWVKEPEAAIASIHQALK-SGGRFVAEFGGKGN 159 (279)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECTTT
T ss_pred EEcchhhhCcCHHHHHHHHHHhcC-CCcEEEEEecCCcc
Confidence 999999999988776777777776 69999998886544
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.21 E-value=3.8e-11 Score=117.61 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=86.2
Q ss_pred HHHHHHHHC----CCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchh
Q 012511 80 VLCEVRRRL----PGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNS 152 (462)
Q Consensus 80 vL~eL~~rl----p~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~ 152 (462)
.+..+...+ +...+.+|||+|||+|..+..++..++ .+|+++|+|+.|++.|++.+.... ++.++..
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--- 139 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG---VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG--- 139 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC---
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc---
Confidence 444444444 333457999999999999888887553 389999999999999998764321 2222221
Q ss_pred HhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 153 IQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 153 ~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
++. .++...++||+|++.++|+++++....+..+.++++ |||.|++.++..+.
T Consensus 140 --d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 192 (297)
T 2o57_A 140 --SFL-EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLK-PRGVMAITDPMKED 192 (297)
T ss_dssp --CTT-SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEECT
T ss_pred --Ccc-cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcC-CCeEEEEEEeccCC
Confidence 222 234456789999999999999987666666677765 69999999976543
No 21
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.21 E-value=8.5e-11 Score=111.14 Aligned_cols=115 Identities=18% Similarity=0.243 Sum_probs=83.6
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l 160 (462)
+..+...++ ++.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++..... .++.++.. ++. .+
T Consensus 44 ~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~-----d~~-~~ 110 (242)
T 3l8d_A 44 IPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRT----GYKAVGVDISEVMIQKGKERGEG-PDLSFIKG-----DLS-SL 110 (242)
T ss_dssp HHHHHHHSC--TTCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHTTTCB-TTEEEEEC-----BTT-BC
T ss_pred HHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhccc-CCceEEEc-----chh-cC
Confidence 333444443 4579999999999999888874 35899999999999999876522 22222222 122 23
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
+...++||+|++.++|+++++....+..+.++++ +||.|++.+++...
T Consensus 111 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 111 PFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK-SDGYACIAILGPTA 158 (242)
T ss_dssp SSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE-EEEEEEEEEECTTC
T ss_pred CCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC-CCeEEEEEEcCCcc
Confidence 4456799999999999999888776777777775 69999999876543
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.21 E-value=7.3e-11 Score=112.22 Aligned_cols=109 Identities=17% Similarity=0.305 Sum_probs=82.9
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
..+.+|||+|||+|..+..++... .+|+++|+|+.|++.++..+... .++.++.. ++. .++...++||
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~-~~~~~~~~fD 89 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV----QECIGVDATKEMVEVASSFAQEKGVENVRFQQG-----TAE-SLPFPDDSFD 89 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS----SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEEC-----BTT-BCCSCTTCEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC----CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEec-----ccc-cCCCCCCcEE
Confidence 356799999999999988887643 48999999999999999876432 22222221 222 2444567899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCc
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQG 210 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~G 210 (462)
+|+++++++++++....+..+.++++ +||.|+++++..+..
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~ 130 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLK-QDGRFLLVDHYAPED 130 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECBCSS
T ss_pred EEEECCchhhccCHHHHHHHHHHHcC-CCcEEEEEEcCCCCC
Confidence 99999999999988777777777776 699999999877655
No 23
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.20 E-value=1.1e-10 Score=109.47 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=82.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCC----ceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLP----LIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~----~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++..+....... .+.. ...++. .++...++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~d~~-~~~~~~~~~ 102 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK----GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEF--KVENAS-SLSFHDSSF 102 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEE--EECCTT-SCCSCTTCE
T ss_pred CCCeEEEECCCCCHHHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEE--EEeccc-ccCCCCCce
Confidence 4579999999999999888874 3589999999999999999876533100 1110 011122 234456789
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchH
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSS 212 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~ 212 (462)
|+|+++++|+++++...+..+++.+.+. +||.|++++++......
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 149 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK 149 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH
Confidence 9999999999999888555555555543 79999999987755443
No 24
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.20 E-value=1.4e-10 Score=111.58 Aligned_cols=124 Identities=21% Similarity=0.237 Sum_probs=86.1
Q ss_pred hhHHHHHH-HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecc
Q 012511 72 AVYSACYR-VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSY 150 (462)
Q Consensus 72 ~~Ya~~~~-vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~ 150 (462)
..|..... ++..+...++ .+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.+. ++.++..
T Consensus 31 ~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~- 100 (263)
T 3pfg_A 31 KDYHREAADLAALVRRHSP--KAASLLDVACGTGMHLRHLADS----FGTVEGLELSADMLAIARRRNP---DAVLHHG- 100 (263)
T ss_dssp CCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHTTT----SSEEEEEESCHHHHHHHHHHCT---TSEEEEC-
T ss_pred CCHHHHHHHHHHHHHhhCC--CCCcEEEeCCcCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhCC---CCEEEEC-
Confidence 34544433 3444444443 3579999999999998887763 3489999999999999998765 2333322
Q ss_pred hhHhhhhhccCCCCCcccEEEecc-cccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 151 NSIQALNKDISKSEREHDLVIASY-VLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 151 ~~~~~l~~~l~~~~~~fDLVias~-vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
++.. ++. .++||+|++++ +|+++++.++...+++++.+. +||.|+|.....+..+
T Consensus 101 ----d~~~-~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 158 (263)
T 3pfg_A 101 ----DMRD-FSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENF 158 (263)
T ss_dssp ----CTTT-CCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTC
T ss_pred ----ChHH-CCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhc
Confidence 1221 232 57899999998 999998667666677776664 7999998655554443
No 25
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=3.7e-11 Score=115.89 Aligned_cols=108 Identities=19% Similarity=0.196 Sum_probs=80.1
Q ss_pred HHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCC
Q 012511 84 VRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKS 163 (462)
Q Consensus 84 L~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~ 163 (462)
+...++...+.+|||+|||+|..+..+++ ...+|+++|+|+.|++.++... ++.++.. ++. .++..
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~-----d~~-~~~~~ 91 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALAN----QGLFVYAVEPSIVMRQQAVVHP----QVEWFTG-----YAE-NLALP 91 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHT----TTCEEEEECSCHHHHHSSCCCT----TEEEECC-----CTT-SCCSC
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHh----CCCEEEEEeCCHHHHHHHHhcc----CCEEEEC-----chh-hCCCC
Confidence 33344434568999999999999988886 3469999999999998776433 2322221 222 24445
Q ss_pred CCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 164 EREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 164 ~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
.++||+|++.++|+++++....+..+.++++ ||.++++++..
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk--gG~~~~~~~~~ 133 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR--DGTIVLLTFDI 133 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC--SSCEEEEEECG
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC--CcEEEEEEcCC
Confidence 6799999999999999888887777777775 89999998753
No 26
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.20 E-value=6.6e-11 Score=110.32 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=81.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++...+ ...+|+++|.|+.|++.|+..+.... ++.++.. ++. .++...++||+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~ 109 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVG-EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS-----EEN-KIPLPDNTVDF 109 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHT-TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC-----BTT-BCSSCSSCEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec-----ccc-cCCCCCCCeeE
Confidence 457999999999998888887653 23589999999999999998875322 2222221 121 23345678999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
|+++++|+++++....+..+.++++ +||.|++++.....
T Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 110 IFMAFTFHELSEPLKFLEELKRVAK-PFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHHEE-EEEEEEEEEECSSC
T ss_pred EEeehhhhhcCCHHHHHHHHHHHhC-CCeEEEEEEecccc
Confidence 9999999999877776666666665 69999999865543
No 27
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.19 E-value=7.9e-11 Score=111.27 Aligned_cols=111 Identities=18% Similarity=0.188 Sum_probs=80.9
Q ss_pred HHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCC
Q 012511 85 RRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 85 ~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
...++...+.+|||+|||+|..+..++.. + ..+|+++|+|+.|++.|+..+... ++.++.. ++. .++...
T Consensus 36 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~-----d~~-~~~~~~ 105 (243)
T 3bkw_A 36 RAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G--ASYVLGLDLSEKMLARARAAGPDT-GITYERA-----DLD-KLHLPQ 105 (243)
T ss_dssp HHHSCCCTTCEEEEETCTTCHHHHHHHHT-T--CSEEEEEESCHHHHHHHHHTSCSS-SEEEEEC-----CGG-GCCCCT
T ss_pred HHhccccCCCEEEEEcCcCCHHHHHHHHC-C--CCeEEEEcCCHHHHHHHHHhcccC-CceEEEc-----Chh-hccCCC
Confidence 33444455689999999999988887774 2 238999999999999999876542 2222221 222 133346
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
++||+|+++++|+++++....+..+.++++ +||.|++..+.
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 146 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALS-PGGHFVFSTEH 146 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcC-cCcEEEEEeCC
Confidence 789999999999999877776666667665 69999998763
No 28
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.19 E-value=7.3e-11 Score=115.35 Aligned_cols=106 Identities=15% Similarity=0.255 Sum_probs=81.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
++.+|||+|||+|..+..+++.++. ..+|+++|+|+.|++.|++.+...+ ++.++.. ++. .++. .++||+|
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~-----d~~-~~~~-~~~fD~v 93 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPE-GSKYTGIDSGETLLAEARELFRLLPYDSEFLEG-----DAT-EIEL-NDKYDIA 93 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCT-TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEES-----CTT-TCCC-SSCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc-----chh-hcCc-CCCeeEE
Confidence 5689999999999999998887762 4689999999999999999876543 2222221 222 1333 4689999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
++.++|+++++....+..+.++++ |||.|+++++.
T Consensus 94 ~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 94 ICHAFLLHMTTPETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred EECChhhcCCCHHHHHHHHHHHcC-CCCEEEEEecc
Confidence 999999999988766666666665 69999999987
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.19 E-value=9.1e-11 Score=108.85 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=74.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++. ....++.++.. ++.. + ...++||+|++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~----~~~v~~~D~s~~~~~~a~~--~~~~~~~~~~~-----d~~~-~-~~~~~~D~v~~ 113 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL----ADRVTALDGSAEMIAEAGR--HGLDNVEFRQQ-----DLFD-W-TPDRQWDAVFF 113 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHGG--GCCTTEEEEEC-----CTTS-C-CCSSCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHh--cCCCCeEEEec-----cccc-C-CCCCceeEEEE
Confidence 469999999999998888775 3589999999999999987 22223333322 2221 2 34678999999
Q ss_pred cccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 173 SYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 173 s~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
+++|+++++ .....+++.+.+. +||.|++++++.+..+
T Consensus 114 ~~~l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 153 (218)
T 3ou2_A 114 AHWLAHVPD-DRFEAFWESVRSAVAPGGVVEFVDVTDHERR 153 (218)
T ss_dssp ESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEECCCC--
T ss_pred echhhcCCH-HHHHHHHHHHHHHcCCCeEEEEEeCCCCccc
Confidence 999999974 3334444444443 7999999999876543
No 30
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.18 E-value=9.5e-11 Score=108.71 Aligned_cols=104 Identities=20% Similarity=0.212 Sum_probs=77.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+ + ..+++++|+|+.|++.+++.+ .++.++.. ++. .++...++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~-----d~~-~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P--YPQKVGVEPSEAMLAVGRRRA---PEATWVRA-----WGE-ALPFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C--CSEEEEECCCHHHHHHHHHHC---TTSEEECC-----CTT-SCCSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C--CCeEEEEeCCHHHHHHHHHhC---CCcEEEEc-----ccc-cCCCCCCcEEEEE
Confidence 5689999999999877665 2 238999999999999999876 22322221 122 2344567899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCch
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGS 211 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf 211 (462)
++++|+++++....+..+.++++ +||.|++..+.....+
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~ 139 (211)
T 2gs9_A 101 LFTTLEFVEDVERVLLEARRVLR-PGGALVVGVLEALSPW 139 (211)
T ss_dssp EESCTTTCSCHHHHHHHHHHHEE-EEEEEEEEEECTTSHH
T ss_pred EcChhhhcCCHHHHHHHHHHHcC-CCCEEEEEecCCcCcH
Confidence 99999999987776667777765 6999999998765444
No 31
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.18 E-value=1.8e-10 Score=110.18 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=75.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-CCCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-KDLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-~~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++..+... .++.++.. +.. .++...++||+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~v 108 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR----GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQA-----DAR-AIPLPDESVHGV 108 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT----TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEES-----CTT-SCCSCTTCEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC----CCEEEEEECCHHHHHHHHHHhhccCCceEEEEc-----ccc-cCCCCCCCeeEE
Confidence 4579999999999988887763 358999999999999999887221 22222221 222 234456789999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+++++|+++++....+..+.++++ +||.|+++
T Consensus 109 ~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVPDWPKVLAEAIRVLK-PGGALLEG 140 (263)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EECCchhhcCCHHHHHHHHHHHCC-CCcEEEEE
Confidence 999999999877766666666665 69999887
No 32
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.17 E-value=1.1e-10 Score=106.74 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=75.8
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.++.+|||+|||+|..+..++.. ..+++++|.|+.|++.+++.+.... ++.++.. ++.. ++. .++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-----d~~~-~~~-~~~~D 99 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN----GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVV-----DLNN-LTF-DRQYD 99 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC-----CGGG-CCC-CCCEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEc-----chhh-CCC-CCCce
Confidence 35679999999999988888773 3489999999999999998765321 2222221 2221 333 67899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
+|++++++++++ .+....+++.+.+. +||.|+++++..+.
T Consensus 100 ~v~~~~~l~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (199)
T 2xvm_A 100 FILSTVVLMFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTA 141 (199)
T ss_dssp EEEEESCGGGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred EEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccC
Confidence 999999999997 33344455555443 79999998875543
No 33
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.17 E-value=2.5e-10 Score=111.15 Aligned_cols=122 Identities=13% Similarity=0.118 Sum_probs=84.3
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNK 158 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~ 158 (462)
+.+..+...++..++.+|||+|||+|..+..+++..+ .+|+++|+|+.|++.|++.+......+.+... ..++.
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~--~~d~~- 124 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD---VNVVGLTLSKNQANHVQQLVANSENLRSKRVL--LAGWE- 124 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEE--ESCGG-
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEE--ECChh-
Confidence 3445555555444567999999999998888875554 38999999999999999987653311111110 11222
Q ss_pred ccCCCCCcccEEEecccccCCC--CHHHHHHHHHHHHhcCCCEEEEEecCCCCc
Q 012511 159 DISKSEREHDLVIASYVLGEVP--SLQDRITIVRQLWDLTRDVLVLVEPGTPQG 210 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~--~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~G 210 (462)
.++ ++||+|++.++|++++ +....+..+.++++ |||.|++.++..+..
T Consensus 125 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~ 174 (287)
T 1kpg_A 125 QFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP-ADGVMLLHTITGLHP 174 (287)
T ss_dssp GCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC-TTCEEEEEEEEECCH
T ss_pred hCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcC-CCCEEEEEEecCCCc
Confidence 232 7899999999999994 44555556666665 799999998866543
No 34
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.17 E-value=7.1e-11 Score=116.10 Aligned_cols=107 Identities=13% Similarity=0.165 Sum_probs=80.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC----CCCCceecchhHhhhhhccCCCC---
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP----KDLPLIHSYNSIQALNKDISKSE--- 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~----~~~~~i~~~~~~~~l~~~l~~~~--- 164 (462)
.+.+|||+|||+|..+..++..++ ...+|+++|+|+.|++.|++.+... .++.++.. ++. .++...
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~-----d~~-~~~~~~~~~ 108 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELK-PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKIS-----SSD-DFKFLGADS 108 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSS-CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEEC-----CTT-CCGGGCTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEc-----CHH-hCCcccccc
Confidence 568999999999999999987663 3578999999999999999887543 22222222 121 122223
Q ss_pred ---CcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 165 ---REHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 165 ---~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
++||+|+++++|+++ +....+..+.++++ +||.|++++.+.
T Consensus 109 ~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 152 (299)
T 3g5t_A 109 VDKQKIDMITAVECAHWF-DFEKFQRSAYANLR-KDGTIAIWGYAD 152 (299)
T ss_dssp TTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEE-EEEEEEEEEEEE
T ss_pred ccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcC-CCcEEEEEecCC
Confidence 789999999999999 78777777777776 699999966543
No 35
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.17 E-value=2.3e-10 Score=112.63 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=85.0
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQA 155 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~ 155 (462)
+.+..+...++...+.+|||+|||+|..+..+++.++ .+|+++|+|+.|++.|++.+...+ ++.++.. +
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d 130 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-----G 130 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-----C
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-----C
Confidence 3445555555444557999999999999988887654 589999999999999999876532 2222221 2
Q ss_pred hhhccCCCCCcccEEEecccccCCCCH------HHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 156 LNKDISKSEREHDLVIASYVLGEVPSL------QDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 156 l~~~l~~~~~~fDLVias~vL~el~~~------~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
+.. + .++||+|++..++++++++ .....+++++.+. |||.|+|.+...+...
T Consensus 131 ~~~-~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 190 (302)
T 3hem_A 131 WEE-F---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKE 190 (302)
T ss_dssp GGG-C---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHH
T ss_pred HHH-c---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCcc
Confidence 221 2 5789999999999999765 3333444444443 7999999998776543
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.17 E-value=2.6e-10 Score=106.51 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=72.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-------CCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-------DLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-------~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.+.+|||+|||+|..+..++...+ ..+|+++|+|+.|++.|++.+.... ++.++.. ++. ..+...
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~-~~~~~~ 100 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKS--FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS-----SLV-YRDKRF 100 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTT--CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC-----CSS-SCCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC-----ccc-cccccc
Confidence 457999999999999988887543 3689999999999999998875321 2222211 121 122345
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEe
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVE 204 (462)
++||+|+++++|++++ ......+++++.+. +||.+|++.
T Consensus 101 ~~fD~V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp TTCSEEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred CCCCEEEEHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 6899999999999996 44444555555543 688655543
No 37
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.17 E-value=1.3e-10 Score=112.17 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=83.3
Q ss_pred HCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHH------HHHHHHHhhcCCCCCCceecchhHhh-h-hh
Q 012511 87 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQS------MQRAGQSLMQGPKDLPLIHSYNSIQA-L-NK 158 (462)
Q Consensus 87 rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~------ml~~Ak~ll~~~~~~~~i~~~~~~~~-l-~~ 158 (462)
.++..++.+|||+|||+|..+..++...+ ...+|+++|+|+. |++.|++.+......+.+... ..+ + ..
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~ 114 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCGQGDLSAVLADQVG-SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH--FNTNLSDD 114 (275)
T ss_dssp HHTCCTTCEEEEESCTTSHHHHHHHHHHC-TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE--CSCCTTTC
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHHHhC-CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE--ECChhhhc
Confidence 33333567999999999999988887653 1358999999997 999999887653211111110 011 1 11
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
.++...++||+|++.++|+++++.....+.++.|.+ +||.|++.+...+.
T Consensus 115 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~-~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 115 LGPIADQHFDRVVLAHSLWYFASANALALLFKNMAA-VCDHVDVAEWSMQP 164 (275)
T ss_dssp CGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT-TCSEEEEEEECSSC
T ss_pred cCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhC-CCCEEEEEEecCCC
Confidence 233346789999999999999988776666666654 69999999976643
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.8e-10 Score=106.14 Aligned_cols=103 Identities=20% Similarity=0.280 Sum_probs=74.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|+.... ++.++... +. .++...++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~d-----~~-~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL----GHQIEGLEPATRLVELARQTHP---SVTFHHGT-----IT-DLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT----TCCEEEECCCHHHHHHHHHHCT---TSEEECCC-----GG-GGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHHhCC---CCeEEeCc-----cc-ccccCCCCeEEEEe
Confidence 579999999999998888774 3489999999999999998743 23333221 21 13334679999999
Q ss_pred cccccCCC--CHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 173 SYVLGEVP--SLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 173 s~vL~el~--~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
.++|++++ +....+..+.++++ +||.|++..+..+.
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVE-DGGGLLMSFFSGPS 146 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEE-EEEEEEEEEECCSS
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEccCCc
Confidence 99999997 34444444444444 69999998876543
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.16 E-value=1.4e-10 Score=112.20 Aligned_cols=107 Identities=14% Similarity=0.272 Sum_probs=82.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
++.+|||+|||+|..+..++...+ ..+|+++|+|+.|++.|+..+.... ++.++.. ++. .++...++||+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~ 108 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNP--DAEITSIDISPESLEKARENTEKNGIKNVKFLQA-----NIF-SLPFEDSSFDH 108 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC-----CGG-GCCSCTTCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc-----ccc-cCCCCCCCeeE
Confidence 457999999999999998888765 3589999999999999998875432 2222221 222 23445679999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
|+++++|+++++....+..+.++++ |||.|+++++..
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 145 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLK-PGGTITVIEGDH 145 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECG
T ss_pred EEEechhhhcCCHHHHHHHHHHHcC-CCcEEEEEEcCC
Confidence 9999999999988877777777776 699999998643
No 40
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.16 E-value=1.3e-10 Score=108.12 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=74.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++. .+..++... ..++.........+||+|+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~--~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR----GIEAVGVDGDRTLVDAARAA----GAGEVHLAS--YAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHT----CSSCEEECC--HHHHHTTCSCCCCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC----CCEEEEEcCCHHHHHHHHHh----cccccchhh--HHhhcccccccCCCccEEE
Confidence 4589999999999998888763 35899999999999999876 222222211 1222211112345699999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
++++|+ ..+....+..+.++++ +||.|++.++..
T Consensus 122 ~~~~l~-~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 155 (227)
T 3e8s_A 122 ANFALL-HQDIIELLSAMRTLLV-PGGALVIQTLHP 155 (227)
T ss_dssp EESCCC-SSCCHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred ECchhh-hhhHHHHHHHHHHHhC-CCeEEEEEecCc
Confidence 999999 6666666666666665 699999988754
No 41
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.16 E-value=2.6e-10 Score=110.79 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=71.4
Q ss_pred CCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc-CCCCCcc
Q 012511 89 PGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI-SKSEREH 167 (462)
Q Consensus 89 p~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l-~~~~~~f 167 (462)
+...+.+|||+|||+|..+..+++. ..+|++||+|+.|++.|++.+... .+... +.++.... ....++|
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~----g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~--~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER----GASVTVFDFSQRMCDDLAEALADR----CVTID--LLDITAEIPKELAGHF 111 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTSSS----CCEEE--ECCTTSCCCGGGTTCC
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHhc----cceee--eeecccccccccCCCc
Confidence 3334579999999999998888763 458999999999999999987653 11111 11111100 1124689
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhc-CCCEEEEEec
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDL-TRDVLVLVEP 205 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~-~gG~LVlVEp 205 (462)
|+|+++++|+++. .++...+++.+.+. |||.|++-.+
T Consensus 112 D~Vv~~~~l~~~~-~~~~~~~l~~l~~lLPGG~l~lS~~ 149 (261)
T 3iv6_A 112 DFVLNDRLINRFT-TEEARRACLGMLSLVGSGTVRASVK 149 (261)
T ss_dssp SEEEEESCGGGSC-HHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEhhhhHhCC-HHHHHHHHHHHHHhCcCcEEEEEec
Confidence 9999999999996 44433344443322 7999988543
No 42
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.15 E-value=6.3e-11 Score=106.14 Aligned_cols=100 Identities=11% Similarity=0.188 Sum_probs=76.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+.... .+++++|.|+.|++.+++.. .++.++.. + .+...++||+|+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~---~~v~~~~~-----d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA----TKLYCIDINVIALKEVKEKF---DSVITLSD-----P----KEIPDNSVDFIL 80 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE----EEEEEECSCHHHHHHHHHHC---TTSEEESS-----G----GGSCTTCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhhc----CeEEEEeCCHHHHHHHHHhC---CCcEEEeC-----C----CCCCCCceEEEE
Confidence 45699999999999888888643 48999999999999999872 23332221 1 334567899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
++++++++++....+..+.++++ +||.|++++....
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILK-DDGRVIIIDWRKE 116 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEE-EEEEEEEEEECSS
T ss_pred EccchhcccCHHHHHHHHHHhcC-CCCEEEEEEcCcc
Confidence 99999999877766666666665 6999999986543
No 43
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.14 E-value=8.1e-11 Score=111.77 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+..+++. ..+|+++|+|+.|++.++.. +.++... ..++. .+...++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~------~~~~~~d--~~~~~--~~~~~~~fD~i~~ 107 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE----GIESIGVDINEDMIKFCEGK------FNVVKSD--AIEYL--KSLPDKYLDGVMI 107 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH----TCCEEEECSCHHHHHHHHTT------SEEECSC--HHHHH--HTSCTTCBSEEEE
T ss_pred CCeEEEEeCCCCHHHHHHHhC----CCcEEEEECCHHHHHHHHhh------cceeecc--HHHHh--hhcCCCCeeEEEE
Confidence 479999999999998887774 24799999999999999865 2222211 11111 1335679999999
Q ss_pred cccccCCCCH--HHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 173 SYVLGEVPSL--QDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 173 s~vL~el~~~--~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
.++|++++.+ ...+..+.++++ +||.|++..++.
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 143 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMK-YSSYIVIESPNP 143 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBC-TTCCEEEEEECT
T ss_pred CCchhhCCcHHHHHHHHHHHHHcC-CCcEEEEEeCCc
Confidence 9999999843 444555555554 799999988864
No 44
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.14 E-value=4e-10 Score=106.09 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=76.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..+.... .+++++|+|+.|++.|++.+.+ +.++.. ++. .++. ..+||+|+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~----~~v~~~D~s~~~~~~a~~~~~~---~~~~~~-----d~~-~~~~-~~~~D~v~ 105 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF----GDTAGLELSEDMLTHARKRLPD---ATLHQG-----DMR-DFRL-GRKFSAVV 105 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH----SEEEEEESCHHHHHHHHHHCTT---CEEEEC-----CTT-TCCC-SSCEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhC----CcEEEEeCCHHHHHHHHHhCCC---CEEEEC-----CHH-Hccc-CCCCcEEE
Confidence 45799999999999988887753 3799999999999999987532 333222 122 1232 56899999
Q ss_pred ecc-cccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 172 ASY-VLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 172 as~-vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
+++ +++++++......+++++.+. +||.|++.++..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 106 SMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred EcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 655 999998777777777777664 79999987655443
No 45
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.14 E-value=4.6e-10 Score=105.90 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=86.1
Q ss_pred chhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceec
Q 012511 71 PAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHS 149 (462)
Q Consensus 71 p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~ 149 (462)
...|......+.++.... ..++.+|||+|||+|..+..+++. ..+++++|+|+.|++.|+..+.... ++.++..
T Consensus 17 ~~~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~----~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 91 (246)
T 1y8c_A 17 DVDYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPK----FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ 91 (246)
T ss_dssp SCCHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGG----SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred cccHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHC----CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec
Confidence 345666666555555433 125689999999999988877764 3589999999999999998875432 2333221
Q ss_pred chhHhhhhhccCCCCCcccEEEecc-cccCCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 150 YNSIQALNKDISKSEREHDLVIASY-VLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 150 ~~~~~~l~~~l~~~~~~fDLVias~-vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
++.. ++.. ++||+|++++ +|+++++......+++++.+. +||.|++.-+
T Consensus 92 -----d~~~-~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 92 -----DISN-LNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp -----CGGG-CCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----cccc-CCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 2323 7899999998 999997666666777777664 7999987443
No 46
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.13 E-value=1.6e-10 Score=110.32 Aligned_cols=104 Identities=13% Similarity=0.167 Sum_probs=77.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..+++..+ .+|+++|+|+.|++.|+..+....- +.++.. ++. .++...++||
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD 116 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK---GQITGIDLFPDFIEIFNENAVKANCADRVKGITG-----SMD-NLPFQNEELD 116 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC---SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-----CTT-SCSSCTTCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-----Chh-hCCCCCCCEE
Confidence 346999999999999998888764 2899999999999999988764321 222221 221 2344567999
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+|++.++|+++ +....+..+.++++ |||.|++.++.
T Consensus 117 ~v~~~~~l~~~-~~~~~l~~~~~~L~-pgG~l~~~~~~ 152 (257)
T 3f4k_A 117 LIWSEGAIYNI-GFERGMNEWSKYLK-KGGFIAVSEAS 152 (257)
T ss_dssp EEEEESCSCCC-CHHHHHHHHHTTEE-EEEEEEEEEEE
T ss_pred EEEecChHhhc-CHHHHHHHHHHHcC-CCcEEEEEEee
Confidence 99999999999 56665555555554 79999999864
No 47
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.13 E-value=1.3e-09 Score=106.52 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=76.4
Q ss_pred CCCeEEEECCch---hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhH-hhh------hhccC
Q 012511 92 SPAKVLDFGAGT---GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSI-QAL------NKDIS 161 (462)
Q Consensus 92 ~p~rVLDvG~G~---G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~-~~l------~~~l~ 161 (462)
...+|||+|||+ |..+..+...++ ..+|++||.|+.|++.|++++....++.++.....- ..+ ...++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p--~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP--DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT--TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC--CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 347999999999 987777777665 358999999999999999988643333333322100 000 01122
Q ss_pred CCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 162 KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
..+||+|+++++||++++. +...+++++.+. +||+|+|.+...
T Consensus 155 --~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 155 --FSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp --TTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred --CCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 2479999999999999863 334455555442 799999998764
No 48
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=3.4e-10 Score=107.49 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=76.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..++...+ +|++||+|+.|++.|++.+.. .++.++.....-......++ ....||+|+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~----~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~~~~~~-~~~~~d~v~ 129 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP----RVIGLDVSKSALEIAAKENTA-ANISYRLLDGLVPEQAAQIH-SEIGDANIY 129 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS----CEEEEESCHHHHHHHHHHSCC-TTEEEEECCTTCHHHHHHHH-HHHCSCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC----CEEEEECCHHHHHHHHHhCcc-cCceEEECcccccccccccc-cccCccEEE
Confidence 347999999999999988887543 799999999999999988742 23333322100000000010 112499999
Q ss_pred ecccccCCC--CHHHHHHHHHHHHhcCCCEEEEEecCCCCch
Q 012511 172 ASYVLGEVP--SLQDRITIVRQLWDLTRDVLVLVEPGTPQGS 211 (462)
Q Consensus 172 as~vL~el~--~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf 211 (462)
++.++++++ +....+..+.++++ +||.|+|++.+.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~ 170 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLG-KQGAMYLIELGTGCID 170 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHT-TTCEEEEEEECTTHHH
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEeCCccccH
Confidence 999999997 33344455555554 7999999999887653
No 49
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.13 E-value=9.5e-11 Score=119.84 Aligned_cols=113 Identities=16% Similarity=0.203 Sum_probs=81.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC----------CCCCceecchhHhhhhh--c
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP----------KDLPLIHSYNSIQALNK--D 159 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~----------~~~~~i~~~~~~~~l~~--~ 159 (462)
.+.+|||+|||+|..+..++..++ ...+|+++|+|+.|++.|++.++.. .++.++... ...+.. .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d--~~~l~~~~~ 159 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVG-EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF--IENLATAEP 159 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHT-TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC--TTCGGGCBS
T ss_pred CCCEEEEecCccCHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEcc--HHHhhhccc
Confidence 467999999999999988888764 2358999999999999999876421 223333221 111110 0
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
.+...++||+|+++++|+++++....+..+.++++ |||.|++.++...
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~ 207 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLR-DGGELYFSDVYAD 207 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEES
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcC-CCCEEEEEEeccc
Confidence 04456799999999999999987776777777776 6999999886554
No 50
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.13 E-value=1.2e-10 Score=110.66 Aligned_cols=107 Identities=14% Similarity=0.235 Sum_probs=74.6
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++... ..+|+++|+|+.|++.|++.+.... ++.++.. ++. .++...++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL---FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-----GLQ-DFTPEPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT---CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-----CGG-GCCCCSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc-----Chh-hcCCCCCCEEE
Confidence 46899999999999888766533 3589999999999999998876431 1112211 222 23334568999
Q ss_pred EEecccccCCCCHH--HHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 170 VIASYVLGEVPSLQ--DRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 170 Vias~vL~el~~~~--~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
|++.++|++++++. ..+..+.++++ +||.|++.++..+
T Consensus 150 v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~ 189 (241)
T 2ex4_A 150 IWIQWVIGHLTDQHLAEFLRRCKGSLR-PNGIIVIKDNMAQ 189 (241)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEBS
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEEccCC
Confidence 99999999997432 33334444443 7999999887544
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.12 E-value=4.4e-10 Score=104.31 Aligned_cols=109 Identities=18% Similarity=0.264 Sum_probs=76.4
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~ 159 (462)
.+..+...++ .+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++..+. +.++.. ++. .
T Consensus 33 ~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~----~~~~~~-----d~~-~ 96 (211)
T 3e23_A 33 TLTKFLGELP--AGAKILELGCGAGYQAEAMLAA----GFDVDATDGSPELAAEASRRLG----RPVRTM-----LFH-Q 96 (211)
T ss_dssp HHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHT----SCCEEC-----CGG-G
T ss_pred HHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHc----CCeEEEECCCHHHHHHHHHhcC----CceEEe-----eec-c
Confidence 3344443333 3579999999999999888873 3589999999999999998762 222221 122 2
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
++ ..++||+|+++++|++++ .++...+++.+.+. +||.|++..+.
T Consensus 97 ~~-~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 97 LD-AIDAYDAVWAHACLLHVP-RDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CC-CCSCEEEEEECSCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CC-CCCcEEEEEecCchhhcC-HHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 33 567899999999999997 44444455554443 79999997653
No 52
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.12 E-value=4.6e-10 Score=111.13 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=83.8
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNK 158 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~ 158 (462)
+.+..+...++..++.+|||+|||+|..+..+++.++ .+|+++|+|+.|++.|++.+........+... ..++.
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~~- 150 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD---VNVIGLTLSKNQHARCEQVLASIDTNRSRQVL--LQGWE- 150 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCGG-
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE--ECChH-
Confidence 3445555555544567999999999998888777543 38999999999999999987654311111110 11222
Q ss_pred ccCCCCCcccEEEecccccCCC--CHHHHHHHHHHHHhcCCCEEEEEecCCCCc
Q 012511 159 DISKSEREHDLVIASYVLGEVP--SLQDRITIVRQLWDLTRDVLVLVEPGTPQG 210 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~--~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~G 210 (462)
.+ +++||+|++..+|++++ +....+..+.++++ |||.|++.++..+..
T Consensus 151 ~~---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~ 200 (318)
T 2fk8_A 151 DF---AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP-ADGRMTVQSSVSYHP 200 (318)
T ss_dssp GC---CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC-TTCEEEEEEEECCCH
T ss_pred HC---CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcC-CCcEEEEEEeccCCc
Confidence 12 26899999999999995 33444445555554 799999999877654
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.12 E-value=9.6e-11 Score=113.04 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=77.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
++.+|||+|||+|..+..+++. + ..+|+++|+|+.|++.|++.+.... ++.++.. ++. .++...++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~-~~~~~~~~fD 116 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-V--TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG-----SMD-DLPFRNEELD 116 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-C--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-----CTT-SCCCCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-c--CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc-----Chh-hCCCCCCCEE
Confidence 4589999999999999888875 2 3589999999999999998875432 1222221 222 2344567899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+|++.++++++ +....+..+.++++ |||.|++.++.
T Consensus 117 ~i~~~~~~~~~-~~~~~l~~~~~~Lk-pgG~l~~~~~~ 152 (267)
T 3kkz_A 117 LIWSEGAIYNI-GFERGLNEWRKYLK-KGGYLAVSECS 152 (267)
T ss_dssp EEEESSCGGGT-CHHHHHHHHGGGEE-EEEEEEEEEEE
T ss_pred EEEEcCCceec-CHHHHHHHHHHHcC-CCCEEEEEEee
Confidence 99999999999 56665555555554 69999999874
No 54
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.12 E-value=4.4e-11 Score=116.78 Aligned_cols=126 Identities=18% Similarity=0.179 Sum_probs=81.6
Q ss_pred chhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC------CC
Q 012511 71 PAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK------DL 144 (462)
Q Consensus 71 p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~------~~ 144 (462)
...+......|.++.... .+.+|||+|||+|..+..+++. ..+|+++|+|+.|++.|++.+.... ++
T Consensus 39 ~~~~~~~~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQH---GCHRVLDVACGTGVDSIMLVEE----GFSVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp SCBCHHHHHHHHHHHHHT---TCCEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred cchHHHHHHHHHHHhccc---CCCEEEEecCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 344444555555444332 3579999999999998888773 3489999999999999987653211 11
Q ss_pred CceecchhHhhhhhccCCCCCcccEEEec-ccccCCCC----HHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 145 PLIHSYNSIQALNKDISKSEREHDLVIAS-YVLGEVPS----LQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 145 ~~i~~~~~~~~l~~~l~~~~~~fDLVias-~vL~el~~----~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
.+.... ...+...+ ...++||+|++. ++|+++++ .++...+++++.+. +||.|++..+.
T Consensus 112 ~~~~~d--~~~~~~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEAN--WLTLDKDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECC--GGGHHHHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecC--hhhCcccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 111111 11111111 345789999998 99999987 24444455555543 79999998774
No 55
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.11 E-value=2.4e-10 Score=113.22 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=82.5
Q ss_pred HHHHCC-CCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhc
Q 012511 84 VRRRLP-GFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKD 159 (462)
Q Consensus 84 L~~rlp-~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~ 159 (462)
+...++ ...+.+|||+|||+|..+..+++.++ .+|+++|+|+.|++.|++.+.... ++.++.. ++. .
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~-~ 178 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG---SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-----NML-D 178 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-----CTT-S
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-----Chh-c
Confidence 444444 23457999999999999888877543 589999999999999998876432 2222221 222 2
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
++...++||+|++..+|+++. ....+..+.++++ +||.|+++++....
T Consensus 179 ~~~~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 179 TPFDKGAVTASWNNESTMYVD-LHDLFSEHSRFLK-VGGRYVTITGCWNP 226 (312)
T ss_dssp CCCCTTCEEEEEEESCGGGSC-HHHHHHHHHHHEE-EEEEEEEEEEEECT
T ss_pred CCCCCCCEeEEEECCchhhCC-HHHHHHHHHHHcC-CCcEEEEEEccccc
Confidence 344567999999999999994 6665666666665 69999999875544
No 56
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.11 E-value=1.3e-10 Score=112.39 Aligned_cols=102 Identities=14% Similarity=-0.007 Sum_probs=70.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC-------------------CCCCCceecchh
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG-------------------PKDLPLIHSYNS 152 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~-------------------~~~~~~i~~~~~ 152 (462)
.+.+|||+|||+|..+..+++. ..+|++||+|+.|++.|++.... ..++.++..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~----G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--- 140 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR----GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC--- 140 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT----TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES---
T ss_pred CCCeEEEeCCCCcHHHHHHHHC----CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC---
Confidence 4579999999999888777762 35899999999999999876531 112222221
Q ss_pred HhhhhhccCCC-CCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEe
Q 012511 153 IQALNKDISKS-EREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 153 ~~~l~~~l~~~-~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVE 204 (462)
++. .++.. .++||+|++..+|++++ ...+..+++++.+. |||.|+|+.
T Consensus 141 --D~~-~l~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 141 --SIF-DLPRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp --CTT-TGGGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --ccc-cCCcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 222 12222 26899999999999996 55555555555553 799997654
No 57
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.10 E-value=1e-10 Score=110.60 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=73.6
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.++.+|||+|||+|..+..++. ...+|+++|+|+.|++.|++.+........+.. ...++.. ++ ...+||+|
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~--~~~d~~~-~~-~~~~fD~v 136 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMAS----PERFVVGLDISESALAKANETYGSSPKAEYFSF--VKEDVFT-WR-PTELFDLI 136 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCB----TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEE--ECCCTTT-CC-CSSCEEEE
T ss_pred CCCCCEEEeCCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHHHhhccCCCcceEE--EECchhc-CC-CCCCeeEE
Confidence 3457999999999998887765 356899999999999999998865321111110 0112221 22 34589999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
+++++|++++ .+.+..+++.+.+. +||.|++++...
T Consensus 137 ~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 137 FDYVFFCAIE-PEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEESSTTTSC-GGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEChhhhcCC-HHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9999999997 33334444444442 799999987643
No 58
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.10 E-value=5e-10 Score=100.57 Aligned_cols=102 Identities=13% Similarity=0.064 Sum_probs=71.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..++..++ ..+|+++|+|+.|++.|++.+.... ++ .+.. +....++...++||
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~-----d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTP--QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ-----GAPRAFDDVPDNPD 96 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSS--SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC-----CTTGGGGGCCSCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCC--CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec-----chHhhhhccCCCCC
Confidence 456999999999999998887664 4689999999999999999876543 22 2221 12122332236899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+|++++++++ ...+..+.++++ +||.|++....
T Consensus 97 ~i~~~~~~~~----~~~l~~~~~~L~-~gG~l~~~~~~ 129 (178)
T 3hm2_A 97 VIFIGGGLTA----PGVFAAAWKRLP-VGGRLVANAVT 129 (178)
T ss_dssp EEEECC-TTC----TTHHHHHHHTCC-TTCEEEEEECS
T ss_pred EEEECCcccH----HHHHHHHHHhcC-CCCEEEEEeec
Confidence 9999999987 222334444443 79999987764
No 59
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.09 E-value=1.2e-10 Score=112.62 Aligned_cols=116 Identities=12% Similarity=0.025 Sum_probs=72.6
Q ss_pred CCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCc------eec---c--------
Q 012511 89 PGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPL------IHS---Y-------- 150 (462)
Q Consensus 89 p~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~------i~~---~-------- 150 (462)
+..++.+|||||||+|..+..++.. ...+|+++|.|+.|++.|++.++... .... +.. .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~---~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD---SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG---TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh---hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHH
Confidence 3445679999999999654433321 23579999999999999998775432 1100 000 0
Q ss_pred ---------hhHhhhhhccC---CCCCcccEEEecccccCC-CCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 151 ---------NSIQALNKDIS---KSEREHDLVIASYVLGEV-PSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 151 ---------~~~~~l~~~l~---~~~~~fDLVias~vL~el-~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
....++....+ ....+||+|+++++|+++ ++..+...+++++.+. |||.||+.....
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 00011111111 124689999999999986 4455555666666554 799999987543
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=3.9e-10 Score=105.35 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=75.6
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-CCCCceecchhHhhhhhc
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-KDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-~~~~~i~~~~~~~~l~~~ 159 (462)
+..+...++. +.+|||+|||+|..+..+.... .+++++|+|+.|++.|+..+... .++.++.. ++. .
T Consensus 29 ~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~-~ 96 (227)
T 1ve3_A 29 EPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYG----FEVVGVDISEDMIRKAREYAKSRESNVEFIVG-----DAR-K 96 (227)
T ss_dssp HHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-----CTT-S
T ss_pred HHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEEC-----chh-c
Confidence 3444444432 6799999999999988887753 28999999999999999877533 22333322 222 1
Q ss_pred cCCCCCcccEEEecccccCCC--CHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 160 ISKSEREHDLVIASYVLGEVP--SLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~--~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
++...++||+|+++.+++... +....+..+.++++ +||.|+++++..
T Consensus 97 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 145 (227)
T 1ve3_A 97 LSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLK-PSGKFIMYFTDL 145 (227)
T ss_dssp CCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEE-EEEEEEEEEECH
T ss_pred CCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcC-CCcEEEEEecCh
Confidence 233456899999999955443 22333344444443 799999998753
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.08 E-value=1.8e-10 Score=118.64 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=82.1
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~ 159 (462)
....+...++...+.+|||+|||+|..+..+.+. ..+|+++|+|+.|++.|++. + .+....... ......
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~----g~~v~gvD~s~~~~~~a~~~--~---~~~~~~~~~-~~~~~~ 164 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA----GVRHLGFEPSSGVAAKAREK--G---IRVRTDFFE-KATADD 164 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT----TCEEEEECCCHHHHHHHHTT--T---CCEECSCCS-HHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc----CCcEEEECCCHHHHHHHHHc--C---CCcceeeec-hhhHhh
Confidence 4445555554334579999999999988888763 34899999999999999865 1 221111111 111112
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
++...++||+|++.++|+|+++....+..+.++++ +||.|++..+.
T Consensus 165 l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lk-pgG~l~i~~~~ 210 (416)
T 4e2x_A 165 VRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLA-PDGVFVFEDPY 210 (416)
T ss_dssp HHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 33345789999999999999988887777777776 69999987664
No 62
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.08 E-value=2.8e-10 Score=110.92 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=74.6
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|+..+.... ++.++.. ++.. ++. .++||+|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~----g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~~-~~~-~~~fD~i 188 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL----GYDVTSWDHNENSIAFLNETKEKENLNISTALY-----DINA-ANI-QENYDFI 188 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-----CGGG-CCC-CSCEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEe-----cccc-ccc-cCCccEE
Confidence 4579999999999998888874 3489999999999999998876432 2222221 2221 222 6789999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
+++.+|++++ ......+++++.+. +||.|+++....
T Consensus 189 ~~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 189 VSTVVFMFLN-RERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp EECSSGGGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EEccchhhCC-HHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999999996 44444455555443 799988876543
No 63
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.05 E-value=3.3e-10 Score=104.69 Aligned_cols=108 Identities=13% Similarity=0.154 Sum_probs=75.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..++..- ..+++++|+|+.|++.+++.+....++.++.. ++. .++...++||+|+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~-----d~~-~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGG---FPNVTSVDYSSVVVAAMQACYAHVPQLRWETM-----DVR-KLDFPSASFDVVL 112 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTT---CCCEEEEESCHHHHHHHHHHTTTCTTCEEEEC-----CTT-SCCSCSSCEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcC---CCcEEEEeCCHHHHHHHHHhcccCCCcEEEEc-----chh-cCCCCCCcccEEE
Confidence 35799999999999888877742 23899999999999999988765333333322 122 1234457899999
Q ss_pred ecccccCCCC------------HHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 172 ASYVLGEVPS------------LQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 172 as~vL~el~~------------~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
++.+++++.. ......+++.+.+. +||.+++++++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 9999877641 22333444444442 7999999998764
No 64
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.04 E-value=2.5e-09 Score=97.03 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=71.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++.. ..+|+++|.|+.|++.|++.++.. .++.++... ...+. ....++||+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~----~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~--~~~l~---~~~~~~fD~ 92 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL----SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDG--HENLD---HYVREPIRA 92 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESC--GGGGG---GTCCSCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCc--HHHHH---hhccCCcCE
Confidence 3579999999999999888864 468999999999999999887642 223333211 11111 123568999
Q ss_pred EEecc-cccC-----CCCHHHHHHHHHHHHhc--CCCEEEEEec-CCCCchHHHHHHHHH
Q 012511 170 VIASY-VLGE-----VPSLQDRITIVRQLWDL--TRDVLVLVEP-GTPQGSSIISQMRSH 220 (462)
Q Consensus 170 Vias~-vL~e-----l~~~~~r~~~i~~Lw~~--~gG~LVlVEp-Gtp~Gf~~I~~aR~~ 220 (462)
|+++. .+.+ ..........++.+.+. +||.|+++.. +.+.|........++
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 152 (185)
T 3mti_A 93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEY 152 (185)
T ss_dssp EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHH
T ss_pred EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 98873 2222 01233444455555443 7999988765 455666554444444
No 65
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.04 E-value=1.4e-09 Score=104.53 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=73.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+++. ..+++++|+|+.|++.|+..... + ++.. ++. .++...++||+|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~--~--~~~~-----d~~-~~~~~~~~fD~v~ 119 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER----GFEVVLVDPSKEMLEVAREKGVK--N--VVEA-----KAE-DLPFPSGAFEAVL 119 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHHTCS--C--EEEC-----CTT-SCCSCTTCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc----CCeEEEEeCCHHHHHHHHhhcCC--C--EEEC-----cHH-HCCCCCCCEEEEE
Confidence 5689999999999998887763 35899999999999999987652 1 2221 122 2344567899999
Q ss_pred ecccccCC-CCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 172 ASYVLGEV-PSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 172 as~vL~el-~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+.+++.++ ++....+..+.++++ +||.|++..++
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 120 ALGDVLSYVENKDKAFSEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEE-EEEEEEEEEEB
T ss_pred EcchhhhccccHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 99876655 555555556666665 69999998775
No 66
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.04 E-value=1.1e-10 Score=111.68 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=75.3
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC----------------
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---------------- 143 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---------------- 143 (462)
.|.++... +..++.+|||+|||+|..+..++... ..+|+++|+|+.|++.|++.+.....
T Consensus 45 ~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (265)
T 2i62_A 45 NLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACES---FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEG 120 (265)
T ss_dssp HHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGT---EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTT
T ss_pred HHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcc---cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccc
Confidence 34444433 44566899999999998776655421 24899999999999999988765321
Q ss_pred ---------------C-CceecchhHhhhhhccCCCC---CcccEEEecccccCCCC-HHHHHHHHHHHHhc--CCCEEE
Q 012511 144 ---------------L-PLIHSYNSIQALNKDISKSE---REHDLVIASYVLGEVPS-LQDRITIVRQLWDL--TRDVLV 201 (462)
Q Consensus 144 ---------------~-~~i~~~~~~~~l~~~l~~~~---~~fDLVias~vL~el~~-~~~r~~~i~~Lw~~--~gG~LV 201 (462)
+ .++. .++....+... ++||+|+++++|+++.. ......+++++.+. |||.|+
T Consensus 121 ~~~~~~~~~~~l~~~v~~~~~-----~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li 195 (265)
T 2i62_A 121 NRMKGPEKEEKLRRAIKQVLK-----CDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLV 195 (265)
T ss_dssp TCSCHHHHHHHHHHHEEEEEE-----CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cccchHHHHHHhhhhheeEEE-----eeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEE
Confidence 1 1111 11221111123 68999999999995542 23344455555543 799999
Q ss_pred EEec
Q 012511 202 LVEP 205 (462)
Q Consensus 202 lVEp 205 (462)
+.+.
T Consensus 196 ~~~~ 199 (265)
T 2i62_A 196 MVDA 199 (265)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9884
No 67
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.04 E-value=2e-10 Score=113.05 Aligned_cols=48 Identities=15% Similarity=0.307 Sum_probs=41.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+.+.+|||+|||+|..+..++..++. .+|++||+|+.|++.|++.+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~--~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGP--SRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCC--SEEEEEESCHHHHHHHHHTC--
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHHHh
Confidence 35689999999999999999988763 5899999999999999987654
No 68
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.02 E-value=1.1e-09 Score=101.16 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=73.4
Q ss_pred CCCeEEEECCchhHH-HHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-CCCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSA-FWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-KDLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~-~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-~~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|.. +..+.. ...+|+++|+|+.|++.|+..+... .++.++.. ++. .++...++||+
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~ 92 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE----DGYKTYGIEISDLQLKKAENFSRENNFKLNISKG-----DIR-KLPFKDESMSF 92 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH----TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEEC-----CTT-SCCSCTTCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEC-----chh-hCCCCCCceeE
Confidence 357999999999975 333333 2358999999999999999876432 22333322 122 23344678999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
|++++++++++ ..+...+++++.+. +||.|++.+...+
T Consensus 93 v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 93 VYSYGTIFHMR-KNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp EEECSCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EEEcChHHhCC-HHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 99999999995 55555555555543 7999999887653
No 69
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.02 E-value=5.6e-10 Score=110.49 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=74.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC---------CCCCceecchhHhhhhhc---
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP---------KDLPLIHSYNSIQALNKD--- 159 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~---------~~~~~i~~~~~~~~l~~~--- 159 (462)
++.+|||+|||+|..+..+... ...+|+++|+|+.|++.|+..+... .++.++.. ++...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~-----D~~~~~~~ 105 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG---RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA-----DSSKELLI 105 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC-----CTTTSCST
T ss_pred CCCEEEEECCCCcHHHHHHHhc---CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEe-----cccccchh
Confidence 4579999999999887777662 2468999999999999999876421 11222221 12111
Q ss_pred --cCCCCCcccEEEecccccCC-CCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 160 --ISKSEREHDLVIASYVLGEV-PSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 160 --l~~~~~~fDLVias~vL~el-~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
++...++||+|+++++|+++ .+......++.++.+. +||.|++..++.
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 21124589999999999998 5555555666666554 799999987653
No 70
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.00 E-value=2.5e-09 Score=95.92 Aligned_cols=109 Identities=10% Similarity=0.096 Sum_probs=74.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
..+.+|||+|||+|..+..++. ...+++++|.|+.|++.++..+.... ++.++.. ++...+ ...+||
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-----d~~~~~--~~~~~D 102 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKG-----RAEDVL--DKLEFN 102 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEES-----CHHHHG--GGCCCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEEC-----Cccccc--cCCCCc
Confidence 3457999999999999888876 35689999999999999998875432 2222222 122222 236899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHHHHHHH
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHI 221 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~aR~~l 221 (462)
+|+++.+ .+....+..+.++ +||.|++..+. ...+.+..+.+
T Consensus 103 ~i~~~~~----~~~~~~l~~~~~~---~gG~l~~~~~~----~~~~~~~~~~l 144 (183)
T 2yxd_A 103 KAFIGGT----KNIEKIIEILDKK---KINHIVANTIV----LENAAKIINEF 144 (183)
T ss_dssp EEEECSC----SCHHHHHHHHHHT---TCCEEEEEESC----HHHHHHHHHHH
T ss_pred EEEECCc----ccHHHHHHHHhhC---CCCEEEEEecc----cccHHHHHHHH
Confidence 9999988 3344444444444 79999998864 33444445544
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.00 E-value=4.1e-10 Score=111.69 Aligned_cols=109 Identities=10% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC--------CCceecch----hHhhhhhcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD--------LPLIHSYN----SIQALNKDI 160 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~--------~~~i~~~~----~~~~l~~~l 160 (462)
+.+|||+|||+|..+..+... ...+|+|||+|+.|++.|++.+..... +.+..... ....+..
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-- 123 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-- 123 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT--
T ss_pred CCeEEEEecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc--
Confidence 579999999999644433331 245899999999999999987653211 01111100 0011211
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
+...++||+|+|.++||++.+.+....+++++.+. |||.||+..+.
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 12356899999999999863332233444444443 79999987653
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.00 E-value=3.5e-09 Score=100.77 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchh
Q 012511 74 YSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNS 152 (462)
Q Consensus 74 Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~ 152 (462)
|......+.++.......++.+|||+|||+|..+..+++. ..+|+++|+|+.|++.|++.+.... ++.++..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~--- 95 (252)
T 1wzn_A 23 VKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER----GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQG--- 95 (252)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEES---
T ss_pred hHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEC---
Confidence 3344445555555544345689999999999998888773 3589999999999999998775432 2333322
Q ss_pred HhhhhhccCCCCCcccEEEecc-cccCCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 153 IQALNKDISKSEREHDLVIASY-VLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 153 ~~~l~~~l~~~~~~fDLVias~-vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
++.. ++ ...+||+|++.+ +++++ +......+++++.+. +||.||+--+
T Consensus 96 --d~~~-~~-~~~~fD~v~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 96 --DVLE-IA-FKNEFDAVTMFFSTIMYF-DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp --CGGG-CC-CCSCEEEEEECSSGGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --Chhh-cc-cCCCccEEEEcCCchhcC-CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 2221 22 236899999874 44555 355555555555543 7999886443
No 73
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.99 E-value=1e-09 Score=102.25 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=75.3
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhh-ccCCCCCcccE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNK-DISKSEREHDL 169 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~-~l~~~~~~fDL 169 (462)
..+.+|||+|||+|..+..+... + .+++++|+|+.|++.++..+.. ++.. ++.. ..+...++||+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~---~~~~~~D~~~~~~~~~~~~~~~-----~~~~-----d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G---TRVSGIEAFPEAAEQAKEKLDH-----VVLG-----DIETMDMPYEEEQFDC 96 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T---CEEEEEESSHHHHHHHHTTSSE-----EEES-----CTTTCCCCSCTTCEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C---CeEEEEeCCHHHHHHHHHhCCc-----EEEc-----chhhcCCCCCCCccCE
Confidence 35689999999999999888874 3 5899999999999999865431 1211 1211 12334578999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
|+++++|+++++....+..+.++++ +||.+++..+...
T Consensus 97 v~~~~~l~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 97 VIFGDVLEHLFDPWAVIEKVKPYIK-QNGVILASIPNVS 134 (230)
T ss_dssp EEEESCGGGSSCHHHHHHHTGGGEE-EEEEEEEEEECTT
T ss_pred EEECChhhhcCCHHHHHHHHHHHcC-CCCEEEEEeCCcc
Confidence 9999999999877654555555554 6999999887653
No 74
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.99 E-value=1.3e-09 Score=106.98 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=73.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-----CCCceecchhHhhhhhccCCCCCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-----DLPLIHSYNSIQALNKDISKSERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-----~~~~i~~~~~~~~l~~~l~~~~~~ 166 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.+.... ++.++.. ++. .++. .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~-----d~~-~~~~-~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL----GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQG-----DMS-AFAL-DKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT----TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEEC-----BTT-BCCC-SCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeC-----chh-cCCc-CCC
Confidence 3459999999999988888763 3579999999999999999876542 2223222 222 2333 578
Q ss_pred ccEEEec-ccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 167 HDLVIAS-YVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 167 fDLVias-~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
||+|+++ .+++++ +.+++..+++++.+. +||.|+|..+..
T Consensus 151 fD~v~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 151 FGTVVISSGSINEL-DEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEEECHHHHTTS-CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCEEEECCcccccC-CHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 9999976 555655 465556666665553 799999977653
No 75
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.99 E-value=2.7e-09 Score=100.33 Aligned_cols=100 Identities=19% Similarity=0.155 Sum_probs=73.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
..+.+|||+|||+|..+..++... .+|+++|+|+.|++.|++.+....++.++.. +....++ ..++||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-----d~~~~~~-~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV----DKVVSVEINEKMYNYASKLLSYYNNIKLILG-----DGTLGYE-EEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS----SEEEEEESCHHHHHHHHHHHTTCSSEEEEES-----CGGGCCG-GGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc----CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-----Ccccccc-cCCCccEE
Confidence 345799999999999988888753 5899999999999999998875443322222 1222122 34689999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
++..+++++.+ .+.++++ +||.|+++.+..
T Consensus 139 ~~~~~~~~~~~------~~~~~L~-pgG~l~~~~~~~ 168 (231)
T 1vbf_A 139 VVWATAPTLLC------KPYEQLK-EGGIMILPIGVG 168 (231)
T ss_dssp EESSBBSSCCH------HHHHTEE-EEEEEEEEECSS
T ss_pred EECCcHHHHHH------HHHHHcC-CCcEEEEEEcCC
Confidence 99999999962 2444554 699999987654
No 76
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.98 E-value=8.5e-10 Score=108.85 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCeEEEECCchhHHHHHHH-HhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALR-EVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~-~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|..+..++ ...+ ..+|+++|+|+.|++.|++.+..... +.++.. ++. .++.. ++|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~-~~~~~-~~f 188 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACP--GVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQ-----DAW-KLDTR-EGY 188 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCT--TCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEEC-----CGG-GCCCC-SCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCC--CCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-----chh-cCCcc-CCe
Confidence 45799999999999887764 2232 46899999999999999998875432 222221 222 23334 799
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
|+|+++.+++++++......+++.+.+. +||.|++.+...+
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 9999999999999887765555555543 7999999886554
No 77
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.98 E-value=6e-09 Score=105.82 Aligned_cols=118 Identities=18% Similarity=0.268 Sum_probs=84.7
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALN 157 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~ 157 (462)
+..+...++...+.+|||+|||+|..+..+++.++. .+++++|. +.|++.|++.+.... ++.++.. ++.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~-----d~~ 262 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPG--LRGTLLER-PPVAEEARELLTGRGLADRCEILPG-----DFF 262 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-----CTT
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCC--CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEecc-----CCC
Confidence 445555554335689999999999999999888763 58999999 999999998775432 2222221 222
Q ss_pred hccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCc
Q 012511 158 KDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQG 210 (462)
Q Consensus 158 ~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~G 210 (462)
..+ +. .||+|++.++|++++ ......+++++.+. |||.|+|+|.-.+..
T Consensus 263 ~~~--p~-~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 263 ETI--PD-GADVYLIKHVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNLIDER 313 (369)
T ss_dssp TCC--CS-SCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSS
T ss_pred CCC--CC-CceEEEhhhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 122 22 799999999999996 55555666666664 799999999766553
No 78
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.97 E-value=2e-09 Score=107.43 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..+.+.+|. .+++++|. +.|++.|++.+.... ++.++.. ++...+ +. .||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~--p~-~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHED--LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVG-----SFFDPL--PA-GAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-----CTTSCC--CC-SCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCC--CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecC-----CCCCCC--CC-CCc
Confidence 3579999999999999999888863 58999999 999999998765432 1222221 222122 22 799
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCc
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQG 210 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~G 210 (462)
+|++.++||+++ .++...+++++.+. |||.|+|+|.-.+..
T Consensus 238 ~v~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 238 GYVLSAVLHDWD-DLSAVAILRRCAEAAGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHHHTTTCEEEEEECCCC--
T ss_pred EEEEehhhccCC-HHHHHHHHHHHHHhcCCCCEEEEEeecCCCC
Confidence 999999999997 44444455544442 799999999866554
No 79
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.97 E-value=3.3e-09 Score=99.27 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=72.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+..+.. . +++|+|+.|++.++.. ++.++.. ++. .++...++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~-----~---~~vD~s~~~~~~a~~~-----~~~~~~~-----d~~-~~~~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI-----K---IGVEPSERMAEIARKR-----GVFVLKG-----TAE-NLPLKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC-----C---EEEESCHHHHHHHHHT-----TCEEEEC-----BTT-BCCSCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHH-----H---hccCCCHHHHHHHHhc-----CCEEEEc-----ccc-cCCCCCCCeeEEEE
Confidence 57999999999988776653 1 9999999999999875 2323222 121 23444578999999
Q ss_pred cccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 173 SYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 173 s~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
.++|+++++....+..+.++++ +||.|++.++...
T Consensus 109 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 109 VTTICFVDDPERALKEAYRILK-KGGYLIVGIVDRE 143 (219)
T ss_dssp ESCGGGSSCHHHHHHHHHHHEE-EEEEEEEEEECSS
T ss_pred cchHhhccCHHHHHHHHHHHcC-CCcEEEEEEeCCc
Confidence 9999999887776666666665 6999999887543
No 80
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.96 E-value=3.9e-09 Score=107.02 Aligned_cols=111 Identities=17% Similarity=0.131 Sum_probs=78.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc-cCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD-ISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~-l~~~~~~fDLV 170 (462)
.+.+|||||||+|..+.++++.+|. .+++++|. +.|++.|++.+........+... ..++... ++. .+.||+|
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKE--VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGH--GANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTT--CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEE--ECCCCSSSCCC-CCCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCC--CEEEEEeC-HHHHHHHHHHHHhcCcccceEEE--EccccccCCCC-CCCcCEE
Confidence 4689999999999999999988874 48999999 99999999987654311112100 0112111 011 2689999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
+++++||+++ +++...+++++.+. |||.|+|+|.-.+.
T Consensus 253 ~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 253 WMSQFLDCFS-EEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp EEESCSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred EEechhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 9999999997 55555566666553 79999999976554
No 81
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.96 E-value=9.2e-10 Score=101.63 Aligned_cols=122 Identities=15% Similarity=0.095 Sum_probs=80.1
Q ss_pred hcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCce
Q 012511 68 SRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLI 147 (462)
Q Consensus 68 ~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i 147 (462)
-++ +.|..++... ...++ .+.+|||+|||+|..++.++...|. .+|+++|+|+.|+++++..+...+-...+
T Consensus 31 eRL-p~ld~fY~~~---~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~--a~~~A~Di~~~~leiar~~~~~~g~~~~v 102 (200)
T 3fzg_A 31 ERV-ATLNDFYTYV---FGNIK--HVSSILDFGCGFNPLALYQWNENEK--IIYHAYDIDRAEIAFLSSIIGKLKTTIKY 102 (200)
T ss_dssp TTG-GGHHHHHHHH---HHHSC--CCSEEEEETCTTHHHHHHHHCSSCC--CEEEEECSCHHHHHHHHHHHHHSCCSSEE
T ss_pred HHh-HhHHHHHHHH---HhhcC--CCCeEEEecCCCCHHHHHHHhcCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCccE
Confidence 345 5555555433 22333 3689999999999999998876653 39999999999999999988653311011
Q ss_pred ecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 148 HSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
.. .++... ...++||+|++..+||.|.+.+....-+.++++ +||++|-.+
T Consensus 103 ~~----~d~~~~--~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~-pggvfISfp 152 (200)
T 3fzg_A 103 RF----LNKESD--VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFH-TQNFVISFP 152 (200)
T ss_dssp EE----ECCHHH--HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCE-EEEEEEEEE
T ss_pred EE----eccccc--CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhC-CCCEEEEeC
Confidence 11 112111 245689999999999999322222233444443 688888888
No 82
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.96 E-value=2.3e-09 Score=97.98 Aligned_cols=117 Identities=20% Similarity=0.110 Sum_probs=74.2
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhh
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALN 157 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~ 157 (462)
++..+.... ...+.+|||+|||+|..+..++.. ...+|+++|.|+.|++.|++.+.... ++.++... ...+.
T Consensus 33 l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~~ 106 (189)
T 3p9n_A 33 LFNIVTARR-DLTGLAVLDLYAGSGALGLEALSR---GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGA--VAAVV 106 (189)
T ss_dssp HHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHT---TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESC--HHHHH
T ss_pred HHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc--HHHHH
Confidence 344444332 235689999999999988866652 24589999999999999998875432 23333321 11111
Q ss_pred hccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHh----cCCCEEEEEecC
Q 012511 158 KDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWD----LTRDVLVLVEPG 206 (462)
Q Consensus 158 ~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~----~~gG~LVlVEpG 206 (462)
.. ....+||+|+++..+++. ......++..+.+ ++||.|++..+.
T Consensus 107 ~~--~~~~~fD~i~~~~p~~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 107 AA--GTTSPVDLVLADPPYNVD--SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HH--CCSSCCSEEEECCCTTSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred hh--ccCCCccEEEECCCCCcc--hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 11 125789999998876664 2333445555544 279999886543
No 83
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.96 E-value=3.8e-09 Score=102.69 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=74.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCC-CCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISK-SEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~-~~~~f 167 (462)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.|++.|+..+..... +.++.. ++.. ++. ..++|
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~-~~~~~~~~f 134 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-G--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-----DSYG-RHMDLGKEF 134 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-T--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-----CTTT-SCCCCSSCE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-C--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEEC-----Cccc-cccCCCCCc
Confidence 4579999999999877766653 2 34899999999999999998765421 122211 1221 232 45789
Q ss_pred cEEEecccccCC-CCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 168 DLVIASYVLGEV-PSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el-~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
|+|++.++|+++ .+......+++.+.+. +||.|++..+.
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999999999884 3455555566665554 79999998865
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.95 E-value=5.8e-09 Score=100.45 Aligned_cols=119 Identities=17% Similarity=0.212 Sum_probs=79.5
Q ss_pred chhHHHHHHHHHHHHH-HCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceec
Q 012511 71 PAVYSACYRVLCEVRR-RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHS 149 (462)
Q Consensus 71 p~~Ya~~~~vL~eL~~-rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~ 149 (462)
.+.|..+...+.++.. .++ ..+.+|||+|||+|..+..+++.++ ..+|+++|+|+.|++.|++...+ +.++..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~ 137 (269)
T 1p91_A 64 AGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALP--EITTFGLDVSKVAIKAAAKRYPQ---VTFCVA 137 (269)
T ss_dssp TTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCT--TSEEEEEESCHHHHHHHHHHCTT---SEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHhCCC---cEEEEc
Confidence 3445555554444433 332 2457999999999998888888664 35899999999999999886532 222221
Q ss_pred chhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCC
Q 012511 150 YNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQ 209 (462)
Q Consensus 150 ~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~ 209 (462)
+.. .++...++||+|++.++... +..+.++++ +||.|+++.++...
T Consensus 138 -----d~~-~~~~~~~~fD~v~~~~~~~~-------l~~~~~~L~-pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 138 -----SSH-RLPFSDTSMDAIIRIYAPCK-------AEELARVVK-PGGWVITATPGPRH 183 (269)
T ss_dssp -----CTT-SCSBCTTCEEEEEEESCCCC-------HHHHHHHEE-EEEEEEEEEECTTT
T ss_pred -----chh-hCCCCCCceeEEEEeCChhh-------HHHHHHhcC-CCcEEEEEEcCHHH
Confidence 121 23445578999999776432 234555665 69999999987643
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.95 E-value=1e-08 Score=94.70 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=76.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++...+ ..+++++|.|+.|++.|++.+.... ++.++.. +....++ ...+||+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~~~~-~~~~~D~ 111 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMP--NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA-----FAPEGLD-DLPDPDR 111 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCT--TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC-----CTTTTCT-TSCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC-----Chhhhhh-cCCCCCE
Confidence 457999999999999988888764 3689999999999999998875322 2222221 1211122 2367999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHHHHHHH
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHI 221 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~aR~~l 221 (462)
|++..+++ +....+..+.++++ +||.|++.... .....+.++.+
T Consensus 112 i~~~~~~~---~~~~~l~~~~~~Lk-pgG~l~~~~~~----~~~~~~~~~~l 155 (204)
T 3e05_A 112 VFIGGSGG---MLEEIIDAVDRRLK-SEGVIVLNAVT----LDTLTKAVEFL 155 (204)
T ss_dssp EEESCCTT---CHHHHHHHHHHHCC-TTCEEEEEECB----HHHHHHHHHHH
T ss_pred EEECCCCc---CHHHHHHHHHHhcC-CCeEEEEEecc----cccHHHHHHHH
Confidence 99998776 34454555555554 79999997653 23344445443
No 86
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.94 E-value=2.9e-09 Score=107.00 Aligned_cols=118 Identities=13% Similarity=0.172 Sum_probs=82.1
Q ss_pred HHHHHCCCCC-CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhh
Q 012511 83 EVRRRLPGFS-PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNK 158 (462)
Q Consensus 83 eL~~rlp~~~-p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~ 158 (462)
++...++... +.+|||+|||+|..+..+.+.+|. .+++++|. +.|++.|+..+..... +.++.. ++..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~ 240 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQ--LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEK-----NLLD 240 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTT--CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEEC-----CTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCC--CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeC-----Cccc
Confidence 4544544334 689999999999999999988873 68999999 8899999987654321 222211 1211
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
..+.....||+|+++++||+++ +.+...+++++.+. |||.|+|+|...+.
T Consensus 241 ~~~~~~~~~D~v~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 241 ARNFEGGAADVVMLNDCLHYFD-AREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp GGGGTTCCEEEEEEESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred CcccCCCCccEEEEecccccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 1101345699999999999996 55555666666654 79999999975543
No 87
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.94 E-value=4.3e-09 Score=99.22 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=71.9
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
..+|||+|||+|..+..++.. .+++++|+|+.|++.|++.+.... ++.++.. ++.. ++. ..+||+|+
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~~-~~~-~~~fD~v~ 101 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH-----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQ-----DMRE-LEL-PEPVDAIT 101 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT-----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-----CGGG-CCC-SSCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHhhC-----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEc-----Chhh-cCC-CCCcCEEE
Confidence 479999999999988877652 589999999999999998875322 2333322 2221 222 36899999
Q ss_pred ecc-cccCCCCHHHHHHHHHHHHhc--CCCEEEEEe
Q 012511 172 ASY-VLGEVPSLQDRITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 172 as~-vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVE 204 (462)
+.+ +++++.+......+++++.+. +||.|++.-
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 102 ILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 987 999997666666666665543 799988733
No 88
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.94 E-value=4e-09 Score=95.40 Aligned_cols=103 Identities=15% Similarity=0.231 Sum_probs=70.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C--CCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D--LPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~--~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|..+..++.. ..+++++|+|+.|++.++..+.... + +.++.. ++...+ ..++|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~-----d~~~~~--~~~~~ 120 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-----DLYENV--KDRKY 120 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-----STTTTC--TTSCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC-----chhccc--ccCCc
Confidence 5579999999999988887764 3589999999999999998875422 1 222221 222212 35689
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
|+|+++..+++. ......+++.+.+. +||.++++.+..
T Consensus 121 D~v~~~~~~~~~--~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 121 NKIITNPPIRAG--KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEECCCSTTC--HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred eEEEECCCcccc--hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 999998887752 33333444444432 699999998765
No 89
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.94 E-value=5e-09 Score=96.03 Aligned_cols=122 Identities=12% Similarity=0.054 Sum_probs=77.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
+.+|||+|||+|..+..++..++. ..+|+++|.|+.|++.|++.+.... ++.++.. ++........++||+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGE-NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-----GHQNMDKYIDCPVKA 96 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCT-TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-----CGGGGGGTCCSCEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-----CHHHHhhhccCCceE
Confidence 479999999999998888876632 3489999999999999999876532 2222221 111111123478999
Q ss_pred EEecccccC------CCCHHHHHHHHHHHHhc--CCCEEEEEec-CCCCchHHHHHHHHH
Q 012511 170 VIASYVLGE------VPSLQDRITIVRQLWDL--TRDVLVLVEP-GTPQGSSIISQMRSH 220 (462)
Q Consensus 170 Vias~vL~e------l~~~~~r~~~i~~Lw~~--~gG~LVlVEp-Gtp~Gf~~I~~aR~~ 220 (462)
|+++..+.. +........++..+.+. +||.|+++.. +.+.|........++
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~ 156 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEF 156 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHH
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHH
Confidence 998876521 11233334455555443 7999999874 345555444444443
No 90
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.92 E-value=6.1e-09 Score=96.43 Aligned_cols=99 Identities=19% Similarity=0.268 Sum_probs=72.3
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.++.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.+.... ++.++.. +..... ....+||
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~~~-~~~~~~D 145 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL----VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG-----DGWQGW-QARAPFD 145 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-----CGGGCC-GGGCCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC-----CcccCC-ccCCCcc
Confidence 35689999999999988888875 3589999999999999999876432 2222221 122212 2356899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+|+++.+++++++ .+.++++ +||.|++.-+.
T Consensus 146 ~i~~~~~~~~~~~------~~~~~L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 146 AIIVTAAPPEIPT------ALMTQLD-EGGILVLPVGE 176 (210)
T ss_dssp EEEESSBCSSCCT------HHHHTEE-EEEEEEEEECS
T ss_pred EEEEccchhhhhH------HHHHhcc-cCcEEEEEEcC
Confidence 9999999999984 2344554 69999998775
No 91
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.91 E-value=1.3e-08 Score=102.80 Aligned_cols=117 Identities=15% Similarity=0.111 Sum_probs=82.0
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALN 157 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~ 157 (462)
...+...++...+.+|||+|||+|..+..+.+.++ ..+++++|+ +.|++.|++.+.... + +.++.. ++.
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~ 250 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP--ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAV-----DIY 250 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT--TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEEC-----CTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC--CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeC-----ccc
Confidence 34444455433568999999999999999988876 358999999 999999998775422 1 222221 121
Q ss_pred hccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 158 KDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 158 ~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
. .+. ..+|+|+++++|++++ ++....+++++.+. +||.|+|+|...+.
T Consensus 251 ~-~~~--~~~D~v~~~~vlh~~~-d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 251 K-ESY--PEADAVLFCRILYSAN-EQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp T-SCC--CCCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred c-CCC--CCCCEEEEechhccCC-HHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 1 122 2349999999999997 55556666666664 79999999976543
No 92
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.91 E-value=6.7e-10 Score=108.55 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=66.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC-CCc------e---ecc-----------
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD-LPL------I---HSY----------- 150 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~-~~~------i---~~~----------- 150 (462)
.+.+|||+|||+|.....++. . ...+|+++|+|+.|++.|++.++.... ... + ...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-S--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-G--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-c--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 568999999999983322222 1 135899999999999999987654211 000 0 000
Q ss_pred ------hhHhhhhhccC-----CCCCcccEEEecccccCCCC-HHHHHHHHHHHHhc--CCCEEEEEe
Q 012511 151 ------NSIQALNKDIS-----KSEREHDLVIASYVLGEVPS-LQDRITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 151 ------~~~~~l~~~l~-----~~~~~fDLVias~vL~el~~-~~~r~~~i~~Lw~~--~gG~LVlVE 204 (462)
....++...++ ...++||+|+++++|+++.. ..+...+++++.+. |||.|++++
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 00001211122 12356999999999999643 23444555555553 799999974
No 93
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.91 E-value=1.5e-09 Score=103.44 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=73.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC-CCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD-LPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~-~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||||||+|..+..+++.. ..++++||+|+.|++.|++....... ..++.. .++++.. +....+||.|
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~---~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~--~a~~~~~--~~~~~~FD~i 132 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP---IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG--LWEDVAP--TLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC---EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES--CHHHHGG--GSCTTCEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhC---CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee--hHHhhcc--cccccCCceE
Confidence 45799999999999888777643 35899999999999999998765432 112211 1222221 2346689988
Q ss_pred E-----ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 171 I-----ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 171 i-----as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+ +.+++.++++....+..+.++++ |||.|++.+
T Consensus 133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~l~f~~ 170 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCN 170 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECC
T ss_pred EEeeeecccchhhhcchhhhhhhhhheeC-CCCEEEEEe
Confidence 6 46677777666666677778886 799999854
No 94
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.90 E-value=1.7e-08 Score=98.46 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=91.4
Q ss_pred HHHHHHHHhcCchhHH--HHHH-HHHHHHHHCC-CCCCCeEEEECCchhH---HHHHHHHhCCCCccEEEEEeCCHHHHH
Q 012511 60 DETIAYVASRMPAVYS--ACYR-VLCEVRRRLP-GFSPAKVLDFGAGTGS---AFWALREVWPRSLEKVNLVEPSQSMQR 132 (462)
Q Consensus 60 ~e~~AYla~r~p~~Ya--~~~~-vL~eL~~rlp-~~~p~rVLDvG~G~G~---~~~al~~~~~~~~~~v~~VD~S~~ml~ 132 (462)
.++...+...+|..-. ...+ .|......+. .....+|||+|||+++ ....+...+|. .+|++||.|+.|++
T Consensus 42 r~~~~~~~~~~P~~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~--arVv~VD~sp~mLa 119 (277)
T 3giw_A 42 KEAGDAMSREWPALPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPE--SRVVYVDNDPIVLT 119 (277)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTT--CEEEEEECCHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCC--CEEEEEeCChHHHH
Confidence 3555666777876432 2222 2333222222 2234799999999733 33334456763 58999999999999
Q ss_pred HHHHhhcCCC--CCCceecchhHhhhhhccCC--CCCccc-----EEEecccccCCCCHHHHHHHHHHHHhc--CCCEEE
Q 012511 133 AGQSLMQGPK--DLPLIHSYNSIQALNKDISK--SEREHD-----LVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLV 201 (462)
Q Consensus 133 ~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~--~~~~fD-----LVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LV 201 (462)
.|+.++.... +..++.... .++...+.. ....|| .|+++.+||++++.+....+++.+.+. |||+|+
T Consensus 120 ~Ar~~l~~~~~~~~~~v~aD~--~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lv 197 (277)
T 3giw_A 120 LSQGLLASTPEGRTAYVEADM--LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLA 197 (277)
T ss_dssp TTHHHHCCCSSSEEEEEECCT--TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEE
T ss_pred HHHHHhccCCCCcEEEEEecc--cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEE
Confidence 9999987532 223333221 111000000 012344 588999999998654345567777654 799999
Q ss_pred EEecCCCCchHHHHHHHHH
Q 012511 202 LVEPGTPQGSSIISQMRSH 220 (462)
Q Consensus 202 lVEpGtp~Gf~~I~~aR~~ 220 (462)
|.+......-+.+..+++.
T Consensus 198 ls~~~~d~~p~~~~~~~~~ 216 (277)
T 3giw_A 198 MSIGTAEFAPQEVGRVARE 216 (277)
T ss_dssp EEEECCTTSHHHHHHHHHH
T ss_pred EEeccCCCCHHHHHHHHHH
Confidence 9886554222444444444
No 95
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.90 E-value=5.5e-09 Score=98.05 Aligned_cols=124 Identities=15% Similarity=0.133 Sum_probs=74.7
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQA 155 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~ 155 (462)
++|..+.... ++.+|||+|||+|..+..++..++ ...+|++||.|+.|++.|++.++... ++.++... ...
T Consensus 48 ~~l~~l~~~~---~~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~ 121 (221)
T 3u81_A 48 QIMDAVIREY---SPSLVLELGAYCGYSAVRMARLLQ-PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGA--SQD 121 (221)
T ss_dssp HHHHHHHHHH---CCSEEEEECCTTSHHHHHHHTTSC-TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHH
T ss_pred HHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHhCC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECC--HHH
Confidence 3444444332 358999999999999988887665 24699999999999999999876432 12222221 111
Q ss_pred hhhccC--CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCch
Q 012511 156 LNKDIS--KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGS 211 (462)
Q Consensus 156 l~~~l~--~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf 211 (462)
....++ ...++||+|++....++.....+.+..+ ++++ +||.||+-+. +..|.
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lk-pgG~lv~~~~-~~~~~ 176 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLR-KGTVLLADNV-IVPGT 176 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCC-TTCEEEESCC-CCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccC-CCeEEEEeCC-CCcch
Confidence 111111 1126899999988776653222222222 3443 7998876443 33443
No 96
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.90 E-value=6e-09 Score=103.61 Aligned_cols=108 Identities=16% Similarity=0.144 Sum_probs=76.9
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+..+.+.++. .+++++|+| .|++.|++.+.... ++.++.. ++.. .+. ...|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~-~~~-~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPN--AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAG-----SAFE-VDY-GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTT--CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEES-----CTTT-SCC-CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCC--CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEec-----cccc-CCC-CCCC
Confidence 34589999999999999998888763 589999999 99999998764321 1222211 1211 122 2349
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
|+|+++++|++++ ......+++++.+. +||.|+|+|+..+.
T Consensus 234 D~v~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 234 DLVLLPNFLHHFD-VATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred cEEEEcchhccCC-HHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 9999999999996 44445555555543 79999999987654
No 97
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.90 E-value=9.3e-09 Score=93.03 Aligned_cols=102 Identities=18% Similarity=0.133 Sum_probs=72.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..+... ..+++++|+|+.|++.++..+.+ +.++.. ++.. ++...++||+|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~~~---~~~~~~-----d~~~-~~~~~~~~D~i~ 112 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ----GHDVLGTDLDPILIDYAKQDFPE---ARWVVG-----DLSV-DQISETDFDLIV 112 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHCTT---SEEEEC-----CTTT-SCCCCCCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC----CCcEEEEcCCHHHHHHHHHhCCC---CcEEEc-----cccc-CCCCCCceeEEE
Confidence 4579999999999998888774 35899999999999999987643 222221 1221 233456899999
Q ss_pred ec-ccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 172 AS-YVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 172 as-~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
++ .++++++ ......++..+.+. +||.+++..+..
T Consensus 113 ~~~~~~~~~~-~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 113 SAGNVMGFLA-EDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp ECCCCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred ECCcHHhhcC-hHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 98 7888885 54445555555443 699998876543
No 98
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.90 E-value=5.5e-09 Score=105.74 Aligned_cols=115 Identities=19% Similarity=0.192 Sum_probs=77.3
Q ss_pred HHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhc
Q 012511 83 EVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKD 159 (462)
Q Consensus 83 eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~ 159 (462)
.+...++...+.+|||+|||+|..+..+.+.++ ..+++++|+ +.|++.|++.+.... ++.++.. ++...
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~ 244 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAP--HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-----DFFKP 244 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-----CTTSC
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCC--CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeC-----CCCCc
Confidence 344444333468999999999999999888775 358999999 999999998775432 2222221 22222
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEec--CCCC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP--GTPQ 209 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp--Gtp~ 209 (462)
++ ..||+|+++++|++++ ......+++++.+. +||.|+|+|. ..+.
T Consensus 245 ~~---~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 294 (374)
T 1qzz_A 245 LP---VTADVVLLSFVLLNWS-DEDALTILRGCVRALEPGGRLLVLDRADVEGD 294 (374)
T ss_dssp CS---CCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCH----
T ss_pred CC---CCCCEEEEeccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEechhhcCC
Confidence 22 2499999999999997 44434455554442 7999999998 5443
No 99
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.89 E-value=8.8e-09 Score=95.70 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=72.5
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
..+.+|||+|||+|..+..++...+ ...+|+++|.|+.|++.|++.+... .++.++.. +....++ ...+||
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~~~~-~~~~fD 148 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVG-EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG-----DGTLGYE-PLAPYD 148 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES-----CGGGCCG-GGCCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC-----CcccCCC-CCCCee
Confidence 3457999999999999988887663 1258999999999999999877532 22222221 1211121 246899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
+|+++.++++++. .+.++++ +||.|+++.+..
T Consensus 149 ~v~~~~~~~~~~~------~~~~~L~-pgG~lv~~~~~~ 180 (215)
T 2yxe_A 149 RIYTTAAGPKIPE------PLIRQLK-DGGKLLMPVGRY 180 (215)
T ss_dssp EEEESSBBSSCCH------HHHHTEE-EEEEEEEEESSS
T ss_pred EEEECCchHHHHH------HHHHHcC-CCcEEEEEECCC
Confidence 9999999999972 3445554 699999987643
No 100
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.89 E-value=1.1e-08 Score=94.02 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=70.2
Q ss_pred eEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEEEec
Q 012511 95 KVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLVIAS 173 (462)
Q Consensus 95 rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLVias 173 (462)
+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.+.... ++.++.. ++. .++...++||+|+++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----d~~-~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL----GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS-----NLA-DFDIVADAWEGIVSI 101 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT----TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECC-----BTT-TBSCCTTTCSEEEEE
T ss_pred CEEEECCCCCHhHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEc-----Chh-hcCCCcCCccEEEEE
Confidence 9999999999988887763 3589999999999999998775321 2222211 122 123345789999996
Q ss_pred ccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 174 YVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 174 ~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
+ .++ .......+++++.+. +||.|++..+..
T Consensus 102 ~--~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 102 F--CHL-PSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp C--CCC-CHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred h--hcC-CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 4 344 355566666666664 799999988754
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.89 E-value=3.3e-09 Score=100.52 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=69.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+..++.. ...+|++||+|+.|++.|++.+.... ++.++... ..++. .+..+++||+|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d--~~~~~--~~~~~~~fD~V 132 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEA---PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVA--PTLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTS---CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHG--GGSCTTCEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhc---CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC--HHHhh--cccCCCceEEE
Confidence 3579999999999988887652 23489999999999999999876433 22222211 11121 13456789999
Q ss_pred Ee-cccccCCC--CHHHH---HHHHHHHHhcCCCEEEEEecC
Q 012511 171 IA-SYVLGEVP--SLQDR---ITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 171 ia-s~vL~el~--~~~~r---~~~i~~Lw~~~gG~LVlVEpG 206 (462)
++ ++.+ ... ....+ +..+.++++ |||.|++++..
T Consensus 133 ~~d~~~~-~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~ 172 (236)
T 1zx0_A 133 LYDTYPL-SEETWHTHQFNFIKNHAFRLLK-PGGVLTYCNLT 172 (236)
T ss_dssp EECCCCC-BGGGTTTHHHHHHHHTHHHHEE-EEEEEEECCHH
T ss_pred EECCccc-chhhhhhhhHHHHHHHHHHhcC-CCeEEEEEecC
Confidence 99 7765 222 12223 334455554 79999998753
No 102
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.87 E-value=1.4e-08 Score=111.40 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=72.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-----CCCCceecchhHhhhhhccCCCCCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-----KDLPLIHSYNSIQALNKDISKSERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-----~~~~~i~~~~~~~~l~~~l~~~~~~ 166 (462)
.+.+|||||||+|..+..++...+ ...+|++||+|+.|++.|++.+... ...+.+.. ...++. .++...++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~-p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVef--iqGDa~-dLp~~d~s 796 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPT-SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATL--YDGSIL-EFDSRLHD 796 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCC-CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEE--EESCTT-SCCTTSCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEE--EECchH-hCCcccCC
Confidence 468999999999999988887542 2368999999999999998855311 11221211 011222 24445678
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
||+|++..+|+|++ ......+++.+.+. || .|||..|.
T Consensus 797 FDlVV~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 797 VDIGTCLEVIEHME-EDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CCEEEEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred eeEEEEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999997 44444444444443 56 66665553
No 103
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.86 E-value=1.1e-08 Score=97.89 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=44.1
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHh--CCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREV--WPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~--~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+..+...++...+.+|||+|||+|..+..++.. ++ ..+|+++|+|+.|++.|+..+..
T Consensus 40 ~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~--~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 40 FQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS--LRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp HHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG--EEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC--CCeEEEEECCHHHHHHHHHHHHH
Confidence 334444443335679999999999998888875 33 35899999999999999977654
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.86 E-value=7.4e-09 Score=95.61 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=72.9
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQAL 156 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l 156 (462)
.++..+...++ .+.+|||+|||+|..+..++. .+ ..+++++|.|+.|++.|++.+.... ++.++.. ++
T Consensus 49 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~-~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-----d~ 118 (205)
T 3grz_A 49 LAMLGIERAMV--KPLTVADVGTGSGILAIAAHK-LG--AKSVLATDISDESMTAAEENAALNGIYDIALQKT-----SL 118 (205)
T ss_dssp HHHHHHHHHCS--SCCEEEEETCTTSHHHHHHHH-TT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEES-----ST
T ss_pred HHHHHHHHhcc--CCCEEEEECCCCCHHHHHHHH-CC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEec-----cc
Confidence 34444444332 357999999999998888776 33 3589999999999999998876432 2322221 12
Q ss_pred hhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 157 NKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 157 ~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
. ....++||+|+++.+++++ ..+++++.+. +||.|++.+...
T Consensus 119 ~---~~~~~~fD~i~~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 119 L---ADVDGKFDLIVANILAEIL------LDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp T---TTCCSCEEEEEEESCHHHH------HHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred c---ccCCCCceEEEECCcHHHH------HHHHHHHHHhcCCCCEEEEEecCc
Confidence 1 1234789999999877653 2344444432 799999976654
No 105
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.86 E-value=1e-08 Score=92.49 Aligned_cols=98 Identities=18% Similarity=0.096 Sum_probs=65.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..++.. . +++++|+|+.|++. ..++.++.. ++.. +...++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~----~-~v~gvD~s~~~~~~-------~~~~~~~~~-----d~~~--~~~~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKR----N-TVVSTDLNIRALES-------HRGGNLVRA-----DLLC--SINQESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTT----S-EEEEEESCHHHHHT-------CSSSCEEEC-----STTT--TBCGGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhc----C-cEEEEECCHHHHhc-------ccCCeEEEC-----Chhh--hcccCCCCEEE
Confidence 4579999999999998888763 3 89999999999987 123333332 1222 22347899999
Q ss_pred ecccccCCCCH------HHHHHHHHHHHhc-CCCEEEEEecCCC
Q 012511 172 ASYVLGEVPSL------QDRITIVRQLWDL-TRDVLVLVEPGTP 208 (462)
Q Consensus 172 as~vL~el~~~------~~r~~~i~~Lw~~-~gG~LVlVEpGtp 208 (462)
++..+++.++. .....++.++.+. +||.+++++++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~ 127 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAVTVGMLYLLVIEAN 127 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGG
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhCCCCEEEEEEecCC
Confidence 99888875533 0112222333222 7999999987543
No 106
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.86 E-value=2.6e-08 Score=94.04 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=77.2
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCC-Ccee
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDL-PLIH 148 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~-~~i~ 148 (462)
+|..-....++|..+....+..+..+|||+|||+|..+..++..++. ..+|++||.|+.|++.|++.++..+.. ..+.
T Consensus 34 ~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~ 112 (221)
T 3dr5_A 34 LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLAD-NTTLTCIDPESEHQRQAKALFREAGYSPSRVR 112 (221)
T ss_dssp CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCT-TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEE
Confidence 44444445556666665543222349999999999988888887752 469999999999999999988653311 1121
Q ss_pred cchhHhhhhhccCC-CCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012511 149 SYNSIQALNKDISK-SEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVL 202 (462)
Q Consensus 149 ~~~~~~~l~~~l~~-~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVl 202 (462)
.. ..+....++. ..++||+|++..... +.......+.++++ +||.||+
T Consensus 113 ~~--~gda~~~l~~~~~~~fD~V~~d~~~~---~~~~~l~~~~~~Lk-pGG~lv~ 161 (221)
T 3dr5_A 113 FL--LSRPLDVMSRLANDSYQLVFGQVSPM---DLKALVDAAWPLLR-RGGALVL 161 (221)
T ss_dssp EE--CSCHHHHGGGSCTTCEEEEEECCCTT---THHHHHHHHHHHEE-EEEEEEE
T ss_pred EE--EcCHHHHHHHhcCCCcCeEEEcCcHH---HHHHHHHHHHHHcC-CCcEEEE
Confidence 10 0111111221 257899999865322 23333444445554 6888887
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.85 E-value=6.3e-09 Score=97.52 Aligned_cols=105 Identities=13% Similarity=0.068 Sum_probs=62.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|..+..+++..+ ..+|++||+|+.|++.+.+..+...++..+... ........+. .++||+|+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~--~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d--~~~~~~~~~~-~~~fD~V~ 131 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD--EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFD--ASKPWKYSGI-VEKVDLIY 131 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT--TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSC--TTCGGGTTTT-CCCEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcC--CCCchhhccc-ccceeEEE
Confidence 457999999999998888888765 358999999999876555444332233222111 0001000122 36899999
Q ss_pred ecccccCCCCHHH-HHHHHHHHHhcCCCEEEEEec
Q 012511 172 ASYVLGEVPSLQD-RITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 172 as~vL~el~~~~~-r~~~i~~Lw~~~gG~LVlVEp 205 (462)
++. ..+ .... .+..+.++++ +||.|+++-+
T Consensus 132 ~~~-~~~--~~~~~~l~~~~r~Lk-pgG~l~i~~~ 162 (210)
T 1nt2_A 132 QDI-AQK--NQIEILKANAEFFLK-EKGEVVIMVK 162 (210)
T ss_dssp ECC-CST--THHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred Eec-cCh--hHHHHHHHHHHHHhC-CCCEEEEEEe
Confidence 872 221 1111 1344455554 7999999853
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.85 E-value=7.2e-09 Score=93.53 Aligned_cols=102 Identities=14% Similarity=0.193 Sum_probs=69.4
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.++.+|||+|||+|..+..++... .+|+++|.|+.|++.+++.+.... ++.++.. ++...++ ...+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~~~~-~~~~~ 101 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV----RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-----DAPEALC-KIPDI 101 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS----SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-----CHHHHHT-TSCCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc----CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-----CHHHhcc-cCCCC
Confidence 356799999999999888887643 689999999999999998775432 2222221 1221122 12489
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|+|+++.+++++ ...+..+.++++ +||.+++..+.
T Consensus 102 D~v~~~~~~~~~---~~~l~~~~~~l~-~gG~l~~~~~~ 136 (192)
T 1l3i_A 102 DIAVVGGSGGEL---QEILRIIKDKLK-PGGRIIVTAIL 136 (192)
T ss_dssp EEEEESCCTTCH---HHHHHHHHHTEE-EEEEEEEEECB
T ss_pred CEEEECCchHHH---HHHHHHHHHhcC-CCcEEEEEecC
Confidence 999999877543 343444444444 69999998764
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.85 E-value=2.1e-08 Score=98.94 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=66.8
Q ss_pred CCCCeEEEECCchhHHH-HHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAF-WALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~-~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+ ..++. ++ ..+|++||+|++|++.|+++++..+ ++.++.. +.. .++ ..+|
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~-~~--ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~g-----Da~-~l~--d~~F 189 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSH-VY--GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITG-----DET-VID--GLEF 189 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHH-TT--CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEES-----CGG-GGG--GCCC
T ss_pred CCcCEEEEECCCccHHHHHHHHH-cc--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEC-----chh-hCC--CCCc
Confidence 35689999999998433 33444 32 3589999999999999999876422 2333322 121 132 5789
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|+|+++.+ .++.....+.+.++++ |||.||+.+
T Consensus 190 DvV~~~a~---~~d~~~~l~el~r~Lk-PGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAAL---AEPKRRVFRNIHRYVD-TETRIIYRT 222 (298)
T ss_dssp SEEEECTT---CSCHHHHHHHHHHHCC-TTCEEEEEE
T ss_pred CEEEECCC---ccCHHHHHHHHHHHcC-CCcEEEEEc
Confidence 99998654 4555565555666654 799999876
No 110
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.85 E-value=8.9e-09 Score=91.56 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=67.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+..++... ..++++|.|+.|++.|+..+.... ++.++... ........+....+||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG----WEAVLVEKDPEAVRLLKENVRRTGLGARVVALP--VEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT----CEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC--HHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHHcCCceEEEecc--HHHHHHhhhccCCceEEE
Confidence 35799999999999888887742 249999999999999998775322 33333221 111111111123479999
Q ss_pred EecccccCCCCHHHHHHHHH--HHHhcCCCEEEEEecCC
Q 012511 171 IASYVLGEVPSLQDRITIVR--QLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~--~Lw~~~gG~LVlVEpGt 207 (462)
+++..++ ....+....+. ++++ +||.+++..+..
T Consensus 115 ~~~~~~~--~~~~~~~~~~~~~~~L~-~gG~~~~~~~~~ 150 (171)
T 1ws6_A 115 FMAPPYA--MDLAALFGELLASGLVE-AGGLYVLQHPKD 150 (171)
T ss_dssp EECCCTT--SCTTHHHHHHHHHTCEE-EEEEEEEEEETT
T ss_pred EECCCCc--hhHHHHHHHHHhhcccC-CCcEEEEEeCCc
Confidence 9997765 33344444444 3343 689888766543
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.85 E-value=5e-09 Score=96.51 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=42.4
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccC---CCCCc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDIS---KSERE 166 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~---~~~~~ 166 (462)
..+.+|||+|||+|..+..++..++ ..+++++|+|+.|++.|+..+.... ++.++. .++...++ ...++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-----~d~~~~~~~~~~~~~~ 101 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP--GVSVTAVDLSMDALAVARRNAERFGAVVDWAA-----ADGIEWLIERAERGRP 101 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT--TEEEEEEECC-------------------CCH-----HHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHHhCCceEEEE-----cchHhhhhhhhhccCc
Confidence 3568999999999999998888764 3589999999999999998776432 222221 12222111 12378
Q ss_pred ccEEEecccc
Q 012511 167 HDLVIASYVL 176 (462)
Q Consensus 167 fDLVias~vL 176 (462)
||+|+++..+
T Consensus 102 fD~i~~npp~ 111 (215)
T 4dzr_A 102 WHAIVSNPPY 111 (215)
T ss_dssp BSEEEECCCC
T ss_pred ccEEEECCCC
Confidence 9999996443
No 112
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.85 E-value=6.2e-09 Score=99.39 Aligned_cols=106 Identities=9% Similarity=0.065 Sum_probs=71.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++.+|||+|||+|+.+..+++..+ ...+|++||.|+.|++.+++.++...++..+.... ... ...+.....+|+|+
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG-~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~--~~p-~~~~~~~~~vDvVf 152 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIG-PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDA--RFP-EKYRHLVEGVDGLY 152 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCT--TCG-GGGTTTCCCEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEec--cCc-cccccccceEEEEE
Confidence 458999999999999999998776 35799999999999999999887766654333211 111 11233456899988
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+....+ .+....+..+.++++ |||.++|+.
T Consensus 153 ~d~~~~--~~~~~~l~~~~r~LK-pGG~lvI~i 182 (233)
T 4df3_A 153 ADVAQP--EQAAIVVRNARFFLR-DGGYMLMAI 182 (233)
T ss_dssp ECCCCT--THHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EeccCC--hhHHHHHHHHHHhcc-CCCEEEEEE
Confidence 653322 222333334444554 799998864
No 113
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.84 E-value=7.9e-09 Score=101.07 Aligned_cols=109 Identities=17% Similarity=0.090 Sum_probs=70.3
Q ss_pred CCCeEEEECCchhH----HHHHHHHhCCCC--ccEEEEEeCCHHHHHHHHHhhcC---CCCCC-----------------
Q 012511 92 SPAKVLDFGAGTGS----AFWALREVWPRS--LEKVNLVEPSQSMQRAGQSLMQG---PKDLP----------------- 145 (462)
Q Consensus 92 ~p~rVLDvG~G~G~----~~~al~~~~~~~--~~~v~~VD~S~~ml~~Ak~ll~~---~~~~~----------------- 145 (462)
.+.+|||+|||+|. .+..+++.++.. ..+|+|+|+|+.|++.|++.+-. ..++|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999997 344455554421 24899999999999999986411 00010
Q ss_pred -c-ee------cchhHhhhhhccCCC-CCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEE
Q 012511 146 -L-IH------SYNSIQALNKDISKS-EREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVL 202 (462)
Q Consensus 146 -~-i~------~~~~~~~l~~~l~~~-~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVl 202 (462)
+ +. ..+...++.. .+.. .++||+|+|.++|+++. ++.+..++.++.+. |||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~-~~~~~~~~fDlI~crnvliyf~-~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLE-KQYNVPGPFDAIFCRNVMIYFD-KTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTC-SSCCCCCCEEEEEECSSGGGSC-HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCC-CCCCcCCCeeEEEECCchHhCC-HHHHHHHHHHHHHHhCCCcEEEE
Confidence 0 00 0000112221 1122 46899999999999995 66667777777765 7999886
No 114
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.84 E-value=9.8e-09 Score=110.35 Aligned_cols=95 Identities=20% Similarity=0.207 Sum_probs=67.2
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQAL 156 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l 156 (462)
..+..+.+.++ +|.+|||||||+|..+..++. ...+|+|||.|+.|++.|+..+...+ ++.+... +..++
T Consensus 55 ~~~~~~~~~~~--~~~~vLDvGCG~G~~~~~la~----~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~--~~~~~ 126 (569)
T 4azs_A 55 EQYDNLSRALG--RPLNVLDLGCAQGFFSLSLAS----KGATIVGIDFQQENINVCRALAEENPDFAAEFRVG--RIEEV 126 (569)
T ss_dssp HHHHHHHHHHT--SCCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEEC--CHHHH
T ss_pred HHHHHHHhhcC--CCCeEEEECCCCcHHHHHHHh----CCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEEC--CHHHH
Confidence 33344444433 578999999999999988887 35689999999999999998876543 2233221 12333
Q ss_pred hhccCCCCCcccEEEecccccCCCCHH
Q 012511 157 NKDISKSEREHDLVIASYVLGEVPSLQ 183 (462)
Q Consensus 157 ~~~l~~~~~~fDLVias~vL~el~~~~ 183 (462)
.. ....++||+|+|.-+|+|++++.
T Consensus 127 ~~--~~~~~~fD~v~~~e~~ehv~~~~ 151 (569)
T 4azs_A 127 IA--ALEEGEFDLAIGLSVFHHIVHLH 151 (569)
T ss_dssp HH--HCCTTSCSEEEEESCHHHHHHHH
T ss_pred hh--hccCCCccEEEECcchhcCCCHH
Confidence 22 12457899999999999998654
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.84 E-value=1.1e-08 Score=96.54 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=66.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+++.++ ..+|++||.|+.|++.++..++...++.++.... ......++.. .+||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAERENIIPILGDA--NKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT--TCGGGGTTTS-CCEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC--CCcccccccC-ccEEEEE
Confidence 457999999999999998888765 3589999999999999998876543333322110 0000002223 6899999
Q ss_pred ecccccCCCCHHHH---HHHHHHHHhcCCCEEEEE
Q 012511 172 ASYVLGEVPSLQDR---ITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 172 as~vL~el~~~~~r---~~~i~~Lw~~~gG~LVlV 203 (462)
++++++... +..+.++++ +||.|+++
T Consensus 149 -----~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~ 177 (230)
T 1fbn_A 149 -----EDVAQPNQAEILIKNAKWFLK-KGGYGMIA 177 (230)
T ss_dssp -----ECCCSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred -----EecCChhHHHHHHHHHHHhCC-CCcEEEEE
Confidence 445555333 334444444 69999885
No 116
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.83 E-value=1.1e-08 Score=101.91 Aligned_cols=116 Identities=14% Similarity=0.284 Sum_probs=80.1
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC---CCCCceecchhHhhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP---KDLPLIHSYNSIQALN 157 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~---~~~~~i~~~~~~~~l~ 157 (462)
...+...++ +.+.+|||+|||+|..+..+.+.++. .+++++|. +.|++.|++.+... .++.++.. ++.
T Consensus 157 ~~~~~~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~ 227 (334)
T 2ip2_A 157 FHEIPRLLD-FRGRSFVDVGGGSGELTKAILQAEPS--ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGG-----DML 227 (334)
T ss_dssp HHHHHHHSC-CTTCEEEEETCTTCHHHHHHHHHCTT--CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEES-----CTT
T ss_pred HHHHHHhCC-CCCCEEEEeCCCchHHHHHHHHHCCC--CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecC-----CCC
Confidence 344444443 33389999999999999998888763 48999999 99999998876431 12222221 222
Q ss_pred hccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 158 KDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 158 ~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
..+ ...||+|++.++||+++ ......+++++.+. +||.|+|+|...+.
T Consensus 228 ~~~---~~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 228 QEV---PSNGDIYLLSRIIGDLD-EAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp TCC---CSSCSEEEEESCGGGCC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CCC---CCCCCEEEEchhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 212 25799999999999996 44444555555443 79999999976543
No 117
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.83 E-value=1.6e-08 Score=101.74 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=80.0
Q ss_pred HHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhcc
Q 012511 84 VRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 84 L~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l 160 (462)
+...++..++.+|||+|||+|..+..+.+.++. .+++++|+ +.|++.|++.+.... ++.++.. ++...+
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~ 246 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPH--VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-----DFFEPL 246 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-----CTTSCC
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCC--CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeC-----CCCCCC
Confidence 344444334679999999999999988887753 58999999 999999998775432 2222221 222222
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC-CCC
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG-TPQ 209 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG-tp~ 209 (462)
+ ..||+|+++++|++++ ......+++++.+. +||.|+|+|+. .+.
T Consensus 247 ~---~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 294 (360)
T 1tw3_A 247 P---RKADAIILSFVLLNWP-DHDAVRILTRCAEALEPGGRILIHERDDLHE 294 (360)
T ss_dssp S---SCEEEEEEESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEECCBCGG
T ss_pred C---CCccEEEEcccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEEEeccCC
Confidence 2 3499999999999997 55445566666554 79999999987 543
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.82 E-value=9.1e-09 Score=91.25 Aligned_cols=115 Identities=11% Similarity=0.077 Sum_probs=71.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchh-Hh---hhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNS-IQ---ALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~-~~---~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|..+..++..++ ...+++++|.|+ |++. .++.++..... .. .+... ...++|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~-~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~~~--~~~~~~ 89 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIG-GKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALLER--VGDSKV 89 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-TTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHHHH--HTTCCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhC-CCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhhcc--CCCCce
Confidence 457999999999999988888753 236899999999 7543 12222211100 00 01100 234689
Q ss_pred cEEEecccccCCCCH-----------HHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHHHHH
Q 012511 168 DLVIASYVLGEVPSL-----------QDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRS 219 (462)
Q Consensus 168 DLVias~vL~el~~~-----------~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~aR~ 219 (462)
|+|+++.+++..... ...+..+.++++ +||.+++..+..+.....+..+++
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQGEGFDEYLREIRS 151 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEESSTTHHHHHHHHHH
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEecCCcHHHHHHHHHH
Confidence 999999998887654 222333334443 799999988876655444433333
No 119
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.82 E-value=3.7e-08 Score=91.60 Aligned_cols=111 Identities=10% Similarity=-0.026 Sum_probs=73.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++.++... ++.++.. +....++ ....||
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-----d~~~~~~-~~~~~D 124 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA----GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG-----TAPAALA-DLPLPE 124 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-----CTTGGGT-TSCCCS
T ss_pred CCCEEEEecCCCCHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC-----chhhhcc-cCCCCC
Confidence 4579999999999998888774 4589999999999999998875432 2222222 1221122 234799
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHHHHHHHH
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHIL 222 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~aR~~lL 222 (462)
+|++...+ +.. .+..+.++++ +||.|++.... .+.+.+..+.+-
T Consensus 125 ~v~~~~~~----~~~-~l~~~~~~Lk-pgG~lv~~~~~----~~~~~~~~~~l~ 168 (204)
T 3njr_A 125 AVFIGGGG----SQA-LYDRLWEWLA-PGTRIVANAVT----LESETLLTQLHA 168 (204)
T ss_dssp EEEECSCC----CHH-HHHHHHHHSC-TTCEEEEEECS----HHHHHHHHHHHH
T ss_pred EEEECCcc----cHH-HHHHHHHhcC-CCcEEEEEecC----cccHHHHHHHHH
Confidence 99988754 233 4445555554 79999987653 344555555543
No 120
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.82 E-value=7.6e-09 Score=97.17 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=74.1
Q ss_pred CCCeEEEECCc-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAG-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
++.+|||+||| +|..+..++... ..+|+++|+|+.|++.|++.+.... ++.++.. +.....+...++||+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~-----d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKS-----NGGIIKGVVEGTFDV 126 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEEC-----SSCSSTTTCCSCEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeC-----CchhhhhcccCceeE
Confidence 45799999999 999988887754 3589999999999999998876433 2333322 111111223478999
Q ss_pred EEecccccCCCCH----------------HHHHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHH
Q 012511 170 VIASYVLGEVPSL----------------QDRITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHI 221 (462)
Q Consensus 170 Vias~vL~el~~~----------------~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~l 221 (462)
|+++..++..... .....+++.+.+. +||.|+++-+. +.....+.++.+
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~~l 193 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---KEKLLNVIKERG 193 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES---CHHHHHHHHHHH
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc---cHhHHHHHHHHH
Confidence 9998665554321 0113345554443 79999997543 334455555554
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.82 E-value=8e-09 Score=105.94 Aligned_cols=121 Identities=9% Similarity=0.104 Sum_probs=77.4
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC---------C--CCCCcee
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG---------P--KDLPLIH 148 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~---------~--~~~~~i~ 148 (462)
.+.++...+......+|||+|||+|..+..++...+ ..+++|||+|+.|+++|+..++. . .++.++.
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g--~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN--CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 344444444434557999999999999988876654 34799999999999999875421 1 2233333
Q ss_pred cchhHhhhhhccCCC--CCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchH
Q 012511 149 SYNSIQALNKDISKS--EREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSS 212 (462)
Q Consensus 149 ~~~~~~~l~~~l~~~--~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~ 212 (462)
.. +.. ++.. ...||+|+++++++. ++.. ..+..+++. |||.||+.|+-.|.++.
T Consensus 239 GD-----~~~-lp~~d~~~~aDVVf~Nn~~F~-pdl~---~aL~Ei~RvLKPGGrIVssE~f~p~d~~ 296 (438)
T 3uwp_A 239 GD-----FLS-EEWRERIANTSVIFVNNFAFG-PEVD---HQLKERFANMKEGGRIVSSKPFAPLNFR 296 (438)
T ss_dssp CC-----TTS-HHHHHHHHTCSEEEECCTTCC-HHHH---HHHHHHHTTSCTTCEEEESSCSSCTTCC
T ss_pred Cc-----ccC-CccccccCCccEEEEcccccC-chHH---HHHHHHHHcCCCCcEEEEeecccCCCCC
Confidence 22 111 1111 136999999877642 2222 233344442 89999999998888774
No 122
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.81 E-value=1.7e-08 Score=98.77 Aligned_cols=111 Identities=12% Similarity=0.110 Sum_probs=72.4
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeC-CHHHHHHHHHhh-----cCCC-------CCCceecchhHhhhh
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEP-SQSMQRAGQSLM-----QGPK-------DLPLIHSYNSIQALN 157 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~-S~~ml~~Ak~ll-----~~~~-------~~~~i~~~~~~~~l~ 157 (462)
..+.+|||+|||+|..+.+++.. + ..+|+++|. |+.|++.|+..+ +... ++.++.. .+.+..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~--~~~~~~ 152 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G--ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY--RWGDSP 152 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T--CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC--CTTSCT
T ss_pred cCCCeEEEecccccHHHHHHHHc-C--CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe--cCCCcc
Confidence 35679999999999988877763 2 348999999 899999999887 2211 1211110 011100
Q ss_pred hccCC--CCCcccEEEecccccCCCCHHHHHHHHHHHHhc--C--CCEEEEE-ecC
Q 012511 158 KDISK--SEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--T--RDVLVLV-EPG 206 (462)
Q Consensus 158 ~~l~~--~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~--gG~LVlV-EpG 206 (462)
..+.. ...+||+||++.++++.+.....+..+.++++. + ||.++++ .+.
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-
T ss_pred HHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEee
Confidence 01100 246899999999999987667777777787761 4 8887664 443
No 123
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.79 E-value=3.2e-08 Score=91.03 Aligned_cols=115 Identities=14% Similarity=0.150 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhH
Q 012511 74 YSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSI 153 (462)
Q Consensus 74 Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~ 153 (462)
......++..+... +...+.+|||+|||+|..+.+++.. + ..+|+++|+|+.|++.|+..+. ++.++..
T Consensus 34 ~~~~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~-~--~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~---- 102 (200)
T 1ne2_A 34 ASTAAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLL-G--AESVTAFDIDPDAIETAKRNCG---GVNFMVA---- 102 (200)
T ss_dssp HHHHHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHT-T--BSEEEEEESCHHHHHHHHHHCT---TSEEEEC----
T ss_pred HHHHHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHc-C--CCEEEEEECCHHHHHHHHHhcC---CCEEEEC----
Confidence 33333444444333 3335679999999999998888764 2 3579999999999999998775 2333322
Q ss_pred hhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 154 QALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 154 ~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
+... ++ .+||+|+++..++++.. .....+++.+.+..|+.+++..+
T Consensus 103 -d~~~-~~---~~~D~v~~~~p~~~~~~-~~~~~~l~~~~~~~g~~~~~~~~ 148 (200)
T 1ne2_A 103 -DVSE-IS---GKYDTWIMNPPFGSVVK-HSDRAFIDKAFETSMWIYSIGNA 148 (200)
T ss_dssp -CGGG-CC---CCEEEEEECCCC--------CHHHHHHHHHHEEEEEEEEEG
T ss_pred -cHHH-CC---CCeeEEEECCCchhccC-chhHHHHHHHHHhcCcEEEEEcC
Confidence 1221 22 58999999999988863 22235666676655444444433
No 124
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.78 E-value=2.7e-08 Score=98.86 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=71.4
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.++.+|||+|||+|..+..+++..+ ...+|+++|+|+.|++.|++.+...+ ++.++.. +..... ...++||
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~-----d~~~~~-~~~~~fD 146 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVG-EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG-----DGYYGV-PEFSPYD 146 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-----CGGGCC-GGGCCEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC-----Chhhcc-ccCCCeE
Confidence 3457999999999998888877644 23579999999999999998875432 2222221 222212 2346899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
+|++..++++++ ..+.++++ +||.|++...
T Consensus 147 ~Iv~~~~~~~~~------~~~~~~Lk-pgG~lvi~~~ 176 (317)
T 1dl5_A 147 VIFVTVGVDEVP------ETWFTQLK-EGGRVIVPIN 176 (317)
T ss_dssp EEEECSBBSCCC------HHHHHHEE-EEEEEEEEBC
T ss_pred EEEEcCCHHHHH------HHHHHhcC-CCcEEEEEEC
Confidence 999999999997 23445555 6999998753
No 125
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.78 E-value=7.6e-09 Score=107.32 Aligned_cols=122 Identities=9% Similarity=0.017 Sum_probs=76.8
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHH-------HHhhcCC----CCCCcee
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAG-------QSLMQGP----KDLPLIH 148 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~A-------k~ll~~~----~~~~~i~ 148 (462)
++..+...+....+.+|||+|||+|..+..++...+ ..+|++||.|+.|++.| +..+... .++.++.
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g--~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG--CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 344444455444568999999999999888887654 34899999999999988 6655432 2222222
Q ss_pred cchhHhhhhh--ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 149 SYNSIQALNK--DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 149 ~~~~~~~l~~--~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
.. ++.. .++....+||+|++++++. .+ +....+..+.+. +||.||+.++-.|..|
T Consensus 308 gD----~~~~~~~~~~~~~~FDvIvvn~~l~-~~---d~~~~L~el~r~LKpGG~lVi~d~f~p~~~ 366 (433)
T 1u2z_A 308 KK----SFVDNNRVAELIPQCDVILVNNFLF-DE---DLNKKVEKILQTAKVGCKIISLKSLRSLTY 366 (433)
T ss_dssp SS----CSTTCHHHHHHGGGCSEEEECCTTC-CH---HHHHHHHHHHTTCCTTCEEEESSCSSCTTC
T ss_pred cC----ccccccccccccCCCCEEEEeCccc-cc---cHHHHHHHHHHhCCCCeEEEEeeccCCccc
Confidence 11 0100 0101135799999987773 22 223344555543 7999999887666554
No 126
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.78 E-value=4.3e-08 Score=91.35 Aligned_cols=104 Identities=8% Similarity=0.052 Sum_probs=70.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccC--CCCCccc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDIS--KSEREHD 168 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~--~~~~~fD 168 (462)
+.+|||+|||+|..+..++...+ ..++++||+|+.|++.|++.+... .++.++... ... ++ ...++||
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p--~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d-----~~~-~~~~~~~~~~D 113 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP--DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD-----GSD-LTDYFEDGEID 113 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC-----SSC-GGGTSCTTCCS
T ss_pred CCeEEEEccCcCHHHHHHHHHCC--CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC-----HHH-HHhhcCCCCCC
Confidence 47999999999999998888775 358999999999999999877532 233333221 111 22 2356899
Q ss_pred EEEecccccCCCC--------HHHHHHHHHHHHhcCCCEEEEEec
Q 012511 169 LVIASYVLGEVPS--------LQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 169 LVias~vL~el~~--------~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
+|++++...+... ....+..+.++++ +||.|++...
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 157 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILP-ENGEIHFKTD 157 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSC-TTCEEEEEES
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcC-CCcEEEEEeC
Confidence 9999876543321 1233444555554 7999988643
No 127
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.77 E-value=2.6e-08 Score=100.15 Aligned_cols=113 Identities=12% Similarity=0.229 Sum_probs=73.3
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhh
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNK 158 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~ 158 (462)
..+...++-..+.+|||+|||+|..+..+++.++. .+++++|.+ .++. +..+.... ++.++.. ++..
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~-----d~~~ 243 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPG--LQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEG-----DFLR 243 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTT--EEEEEEECH-HHHT--TCCCCCGGGTTSEEEEEC-----CTTT
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCC--CEEEEecCH-HHhh--cccccccCCCCCeEEEec-----CCCC
Confidence 34555554334579999999999999999988863 589999994 4444 22222111 1111111 2211
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
.+ . +||+|+++++||+++ +.+...+++++.+. |||.|+|+|.-.+.
T Consensus 244 ~~---p-~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 244 EV---P-HADVHVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp CC---C-CCSEEEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CC---C-CCcEEEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 12 2 899999999999997 55445566665553 79999999975443
No 128
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.77 E-value=7.7e-09 Score=93.09 Aligned_cols=107 Identities=21% Similarity=0.200 Sum_probs=67.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+..++.. + ..+|+++|+|+.|++.|+..++... ++.++.. +....++....+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~f 101 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-G--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-----EAERAIDCLTGRF 101 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-T--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-----CHHHHHHHBCSCE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-----cHHHhHHhhcCCC
Confidence 35679999999999998877764 2 3589999999999999999886543 1222221 1111112223579
Q ss_pred cEEEecccccCCCCHHHHHHHHH--HHHhcCCCEEEEEecCC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVR--QLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~--~Lw~~~gG~LVlVEpGt 207 (462)
|+|+++..++.. ...+.+..+. ++++ +||.+++..+..
T Consensus 102 D~i~~~~~~~~~-~~~~~~~~l~~~~~L~-~gG~l~~~~~~~ 141 (177)
T 2esr_A 102 DLVFLDPPYAKE-TIVATIEALAAKNLLS-EQVMVVCETDKT 141 (177)
T ss_dssp EEEEECCSSHHH-HHHHHHHHHHHTTCEE-EEEEEEEEEETT
T ss_pred CEEEECCCCCcc-hHHHHHHHHHhCCCcC-CCcEEEEEECCc
Confidence 999998654321 1222223332 2222 689988876543
No 129
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.77 E-value=1.1e-08 Score=96.22 Aligned_cols=91 Identities=10% Similarity=0.107 Sum_probs=63.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCC-CCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKS-EREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~-~~~fDLV 170 (462)
.+.+|||+|||+|..+..++.. ..+|+++|+|+.|++.++... .++.++.. ++...++.. .++||+|
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~-----d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ----AARWAAYDFSPELLKLARANA---PHADVYEW-----NGKGELPAGLGAPFGLI 115 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHC---TTSEEEEC-----CSCSSCCTTCCCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHhC---CCceEEEc-----chhhccCCcCCCCEEEE
Confidence 3579999999999999888874 358999999999999999873 23333322 222234444 6789999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEE
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLV 201 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LV 201 (462)
+++. +....+..+.++++ |||.|+
T Consensus 116 ~~~~------~~~~~l~~~~~~Lk-pgG~l~ 139 (226)
T 3m33_A 116 VSRR------GPTSVILRLPELAA-PDAHFL 139 (226)
T ss_dssp EEES------CCSGGGGGHHHHEE-EEEEEE
T ss_pred EeCC------CHHHHHHHHHHHcC-CCcEEE
Confidence 9882 23333344555665 699998
No 130
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.75 E-value=2.8e-08 Score=92.16 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=65.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
+.+|||+|||+|..+..++.. ...+|++||.|+.|++.|++.++... ++.++.. +....++....+||+|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~---~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-----D~~~~~~~~~~~fD~V 126 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSR---YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNS-----NAMSFLAQKGTPHNIV 126 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHT---TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS-----CHHHHHSSCCCCEEEE
T ss_pred CCeEEEeCCCcCHHHHHHHhc---CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEEC-----CHHHHHhhcCCCCCEE
Confidence 479999999999988865543 23489999999999999998875432 2222222 2222223345689999
Q ss_pred EecccccCCCCHHHHHHHHHH--HHhcCCCEEEEEe
Q 012511 171 IASYVLGEVPSLQDRITIVRQ--LWDLTRDVLVLVE 204 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~--Lw~~~gG~LVlVE 204 (462)
++...++ .......+..+.+ +++ +||.|++..
T Consensus 127 ~~~~p~~-~~~~~~~l~~l~~~~~L~-pgG~l~i~~ 160 (202)
T 2fpo_A 127 FVDPPFR-RGLLEETINLLEDNGWLA-DEALIYVES 160 (202)
T ss_dssp EECCSSS-TTTHHHHHHHHHHTTCEE-EEEEEEEEE
T ss_pred EECCCCC-CCcHHHHHHHHHhcCccC-CCcEEEEEE
Confidence 9986644 3334443333333 133 689888754
No 131
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.75 E-value=6.4e-08 Score=90.56 Aligned_cols=106 Identities=9% Similarity=0.043 Sum_probs=70.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCcccEE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
..+|||+|||+|..+..++...+ ...+++||+|+.|++.|++.+... .++.++... ...+... ...++||.|
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p--~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d--~~~l~~~--~~~~~~d~v 112 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNP--DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID--ADTLTDV--FEPGEVKRV 112 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCT--TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC--GGGHHHH--CCTTSCCEE
T ss_pred CceEEEEecCCCHHHHHHHHHCC--CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC--HHHHHhh--cCcCCcCEE
Confidence 46999999999999998888775 358999999999999999877532 233333322 1112111 235679999
Q ss_pred EecccccCCCC--------HHHHHHHHHHHHhcCCCEEEEEec
Q 012511 171 IASYVLGEVPS--------LQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 171 ias~vL~el~~--------~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
++.+...+... ....+..+.++++ +||.|++...
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-pgG~l~~~td 154 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMG-KGGSIHFKTD 154 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHT-TSCEEEEEES
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcC-CCCEEEEEeC
Confidence 87665433221 1233455566665 7999998653
No 132
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.75 E-value=3.9e-08 Score=100.60 Aligned_cols=111 Identities=19% Similarity=0.149 Sum_probs=73.4
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
..+.+|||+|||+|..+..++.. ..+|++||.|+.|++.|++.+.... .+.++.. +... .....++||+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~----g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~-----D~~~-~~~~~~~fD~ 301 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM----GAEVVGVEDDLASVLSLQKGLEANALKAQALHS-----DVDE-ALTEEARFDI 301 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT----TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEEC-----STTT-TSCTTCCEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEc-----chhh-ccccCCCeEE
Confidence 34579999999999988887773 3589999999999999999876432 2222221 2221 1223478999
Q ss_pred EEecccccCCCC--HHHHHHHHHHHHhc--CCCEEEEEecCCCCchH
Q 012511 170 VIASYVLGEVPS--LQDRITIVRQLWDL--TRDVLVLVEPGTPQGSS 212 (462)
Q Consensus 170 Vias~vL~el~~--~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~ 212 (462)
|+++..+++... ......++..+.+. +||.|+|+.+.. ..+.
T Consensus 302 Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~-l~~~ 347 (381)
T 3dmg_A 302 IVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF-LKYE 347 (381)
T ss_dssp EEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT-SCHH
T ss_pred EEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC-CChH
Confidence 999988887221 23333344444332 699999987644 3443
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.74 E-value=1.5e-08 Score=91.59 Aligned_cols=108 Identities=14% Similarity=0.135 Sum_probs=67.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..++. . ...+|+++|.|+.|++.|+..+.... ++.++... .......++....+||
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-R--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD--ANRALEQFYEEKLQFD 118 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-T--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHHTTCCEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-c--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECc--HHHHHHHHHhcCCCCC
Confidence 457999999999998887666 2 23689999999999999998775422 12222221 1111111112256899
Q ss_pred EEEecccccCCCCHHHHHHHH--HHHHhcCCCEEEEEecC
Q 012511 169 LVIASYVLGEVPSLQDRITIV--RQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i--~~Lw~~~gG~LVlVEpG 206 (462)
+|++...++.. ........+ .++++ +||.+++..+.
T Consensus 119 ~i~~~~~~~~~-~~~~~~~~l~~~~~L~-~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAKQ-EIVSQLEKMLERQLLT-NEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGGC-CHHHHHHHHHHTTCEE-EEEEEEEEEET
T ss_pred EEEECCCCCch-hHHHHHHHHHHhcccC-CCCEEEEEeCC
Confidence 99998775532 344444444 22233 68988876554
No 134
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.74 E-value=2.9e-08 Score=94.77 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=71.5
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+.+++...+ ...+++++|.|+.|++.|++.++... + +.++.. ++... ....+|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~--~~~~~~ 163 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVG-PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-----DIYEG--IEEENV 163 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-----CGGGC--CCCCSE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhC-CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-----chhhc--cCCCCc
Confidence 3467999999999999988887633 24689999999999999998875422 2 222221 22222 235679
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
|+|+++ +++....+..+.++++ +||.++++++..
T Consensus 164 D~v~~~-----~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 197 (255)
T 3mb5_A 164 DHVILD-----LPQPERVVEHAAKALK-PGGFFVAYTPCS 197 (255)
T ss_dssp EEEEEC-----SSCGGGGHHHHHHHEE-EEEEEEEEESSH
T ss_pred CEEEEC-----CCCHHHHHHHHHHHcC-CCCEEEEEECCH
Confidence 999973 4455555555566665 699999988753
No 135
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.74 E-value=2.1e-08 Score=95.05 Aligned_cols=119 Identities=11% Similarity=0.178 Sum_probs=73.6
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCc
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPL 146 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~ 146 (462)
+|..-......|..+.... ++.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.++... ++.+
T Consensus 52 ~~~~~~~~~~~l~~~~~~~---~~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 126 (232)
T 3ntv_A 52 VPIVDRLTLDLIKQLIRMN---NVKNILEIGTAIGYSSMQFASISD--DIHVTTIERNETMIQYAKQNLATYHFENQVRI 126 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHH---TCCEEEEECCSSSHHHHHHHTTCT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred CCCcCHHHHHHHHHHHhhc---CCCEEEEEeCchhHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 3433334444454444332 357999999999999888887554 4689999999999999999876433 2223
Q ss_pred eecchhHhhhhhccC-CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012511 147 IHSYNSIQALNKDIS-KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVL 202 (462)
Q Consensus 147 i~~~~~~~~l~~~l~-~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVl 202 (462)
+.. +....++ ...++||+|++.... ......+..+.++++ +||.||+
T Consensus 127 ~~~-----d~~~~~~~~~~~~fD~V~~~~~~---~~~~~~l~~~~~~Lk-pgG~lv~ 174 (232)
T 3ntv_A 127 IEG-----NALEQFENVNDKVYDMIFIDAAK---AQSKKFFEIYTPLLK-HQGLVIT 174 (232)
T ss_dssp EES-----CGGGCHHHHTTSCEEEEEEETTS---SSHHHHHHHHGGGEE-EEEEEEE
T ss_pred EEC-----CHHHHHHhhccCCccEEEEcCcH---HHHHHHHHHHHHhcC-CCeEEEE
Confidence 322 1211122 225689999976432 223333333444443 6898876
No 136
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.74 E-value=4e-08 Score=94.11 Aligned_cols=105 Identities=9% Similarity=0.034 Sum_probs=66.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
++.+|||+|||+|..+..++..++. ..+|+++|.|+.|++.|++.+...+ ++.++... .......+ ...++||
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~l~~~-~~~~~fD 138 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPA-DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP--ALQSLESL-GECPAFD 138 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHTC-CSCCCCS
T ss_pred CCCEEEEecCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHhc-CCCCCeE
Confidence 3579999999999999988887752 4689999999999999999876432 22222221 11111111 1235899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+|++..... .....+..+.++++ +||.||+-+
T Consensus 139 ~V~~d~~~~---~~~~~l~~~~~~Lk-pGG~lv~~~ 170 (248)
T 3tfw_A 139 LIFIDADKP---NNPHYLRWALRYSR-PGTLIIGDN 170 (248)
T ss_dssp EEEECSCGG---GHHHHHHHHHHTCC-TTCEEEEEC
T ss_pred EEEECCchH---HHHHHHHHHHHhcC-CCeEEEEeC
Confidence 999865322 22233333444443 799887744
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.74 E-value=2.5e-08 Score=93.94 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=71.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhh-hhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQA-LNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~-l~~~l~~~~~~fD 168 (462)
...+|||+|||+|..+..++...+. ..|++||+|+.|++.|+..+... .++.++... ... +... ...++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~--~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~D--a~~~l~~~--~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE--QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHD--AVEVLHKM--IPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSC--HHHHHHHH--SCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC--CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECC--HHHHHHHH--cCCCChh
Confidence 3469999999999999988887763 58999999999999999877532 233333321 111 1111 2467899
Q ss_pred EEEecccccCCCCHH--------HHHHHHHHHHhcCCCEEEEEec
Q 012511 169 LVIASYVLGEVPSLQ--------DRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 169 LVias~vL~el~~~~--------~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
.|++.+...+..... ..+..+.++++ |||.|+++..
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lk-pGG~l~i~td 151 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQ-LGGVFHMATD 151 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEE-EEEEEEEEES
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcC-CCcEEEEEeC
Confidence 999886544332211 23444555554 7999998764
No 138
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.74 E-value=3.1e-08 Score=94.13 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=67.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.++.. .++.++... ..++... +...++||+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~~~~-~~~~~~fD~ 144 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFP--HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDR--AETFGQR-KDVRESYDI 144 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESC--HHHHTTC-TTTTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEecc--HHHhccc-ccccCCccE
Confidence 457999999999987777776554 358999999999999999876532 233333321 1122100 112468999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|++..+ .+....+..+.++++ +||.|+++.
T Consensus 145 V~~~~~----~~~~~~l~~~~~~Lk-pgG~l~~~~ 174 (240)
T 1xdz_A 145 VTARAV----ARLSVLSELCLPLVK-KNGLFVALK 174 (240)
T ss_dssp EEEECC----SCHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred EEEecc----CCHHHHHHHHHHhcC-CCCEEEEEe
Confidence 998763 444444444444444 699998874
No 139
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.74 E-value=2e-08 Score=93.11 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=65.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhhhhccCC-CCCc-
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQALNKDISK-SERE- 166 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l~~~l~~-~~~~- 166 (462)
+.+|||+|||+|..+..++.. ...+|++||.|+.|++.|++.+.... ++.++.. +....++. ..++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~~~~~ 125 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR---QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQ-----SSLDFLKQPQNQPH 125 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT---TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECS-----CHHHHTTSCCSSCC
T ss_pred CCeEEEcCCccCHHHHHHHHc---cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEEC-----CHHHHHHhhccCCC
Confidence 479999999999988765542 23589999999999999998875432 2222221 12211221 2467
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHh----cCCCEEEEEecC
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWD----LTRDVLVLVEPG 206 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~----~~gG~LVlVEpG 206 (462)
||+|++...++ ..... .+++.+.+ ++||.|++....
T Consensus 126 fD~I~~~~~~~-~~~~~---~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 126 FDVVFLDPPFH-FNLAE---QAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEEEEECCCSS-SCHHH---HHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCEEEECCCCC-CccHH---HHHHHHHhcCccCCCcEEEEEECC
Confidence 99999987754 32233 34444421 279998876543
No 140
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.73 E-value=2.3e-08 Score=102.11 Aligned_cols=118 Identities=14% Similarity=0.098 Sum_probs=74.7
Q ss_pred HCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCC
Q 012511 87 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 87 rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.++...+.+|||+|||+|..+..++...+ ..+|++||.|+.|++.|++.+.... +...+. ....++.. +...
T Consensus 217 ~l~~~~~~~VLDlGcG~G~~s~~la~~~p--~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~--~~~~D~~~--~~~~ 290 (375)
T 4dcm_A 217 HLPENLEGEIVDLGCGNGVIGLTLLDKNP--QAKVVFVDESPMAVASSRLNVETNMPEALDRCE--FMINNALS--GVEP 290 (375)
T ss_dssp TCCCSCCSEEEEETCTTCHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEE--EEECSTTT--TCCT
T ss_pred hCcccCCCeEEEEeCcchHHHHHHHHHCC--CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEE--EEechhhc--cCCC
Confidence 34444458999999999999999888765 3689999999999999998875432 100110 00112221 1235
Q ss_pred CcccEEEecccccCCCC--HHHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 165 REHDLVIASYVLGEVPS--LQDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 165 ~~fDLVias~vL~el~~--~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
++||+|+++..++.... ......+++.+.+. +||.|+++-+.. .+|
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~-~~~ 340 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH-LDY 340 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT-SCH
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC-cCH
Confidence 68999999988875321 12223455555542 799999987643 455
No 141
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.72 E-value=2.5e-08 Score=95.06 Aligned_cols=108 Identities=15% Similarity=0.069 Sum_probs=73.3
Q ss_pred HCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC---CCCCceecchhHhhhhhccCCC
Q 012511 87 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP---KDLPLIHSYNSIQALNKDISKS 163 (462)
Q Consensus 87 rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~---~~~~~i~~~~~~~~l~~~l~~~ 163 (462)
.+....+.+|||+|||+|..+.+++..++ ...+++++|.|+.|++.|++.++.. .++.++.. ++.. .+..
T Consensus 91 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~-----d~~~-~~~~ 163 (258)
T 2pwy_A 91 LLDLAPGMRVLEAGTGSGGLTLFLARAVG-EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG-----KLEE-AELE 163 (258)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES-----CGGG-CCCC
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC-----chhh-cCCC
Confidence 33333457999999999999988887643 2458999999999999999887532 22222221 2222 2233
Q ss_pred CCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 164 EREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 164 ~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
.++||+|++. +++....+..+.++++ +||.|+++.+..
T Consensus 164 ~~~~D~v~~~-----~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 201 (258)
T 2pwy_A 164 EAAYDGVALD-----LMEPWKVLEKAALALK-PDRFLVAYLPNI 201 (258)
T ss_dssp TTCEEEEEEE-----SSCGGGGHHHHHHHEE-EEEEEEEEESCH
T ss_pred CCCcCEEEEC-----CcCHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 4689999983 4455555555666665 699999999753
No 142
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.72 E-value=2.8e-08 Score=95.57 Aligned_cols=118 Identities=15% Similarity=0.171 Sum_probs=76.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..++.++..++ ..+|++||+|+.|++.|++.++.. .++.+++.. ..++.. .+....+||+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d--~~~~~~-~~~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP--ELELVLVDATRKKVAFVERAIEVLGLKGARALWGR--AEVLAR-EAGHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECC--HHHHTT-STTTTTCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECc--HHHhhc-ccccCCCceE
Confidence 467999999999988888887765 368999999999999999887643 233333321 112210 0012468999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchHHHHHHHHHH
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHI 221 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~~I~~aR~~l 221 (462)
|++..+ .+.....+.+..+++ +||.++++.... ..+.+.++...+
T Consensus 155 I~s~a~----~~~~~ll~~~~~~Lk-pgG~l~~~~g~~--~~~e~~~~~~~l 199 (249)
T 3g89_A 155 AVARAV----APLCVLSELLLPFLE-VGGAAVAMKGPR--VEEELAPLPPAL 199 (249)
T ss_dssp EEEESS----CCHHHHHHHHGGGEE-EEEEEEEEECSC--CHHHHTTHHHHH
T ss_pred EEECCc----CCHHHHHHHHHHHcC-CCeEEEEEeCCC--cHHHHHHHHHHH
Confidence 998653 334444455555554 699999877432 234444444443
No 143
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.71 E-value=4.5e-08 Score=91.88 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=66.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhh--ccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNK--DISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~--~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..+++.++. ..+|+++|.|+.|++.+++.++...++.++... +.. .+.....+||+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d-----~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEERRNIVPILGD-----ATKPEEYRALVPKVDV 146 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECC-----TTCGGGGTTTCCCEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCC-CeEEEEEECCHHHHHHHHHHHhccCCCEEEEcc-----CCCcchhhcccCCceE
Confidence 4579999999999999888876542 358999999999999998887654333333221 111 01112358999
Q ss_pred EEecccccCCCCHHHH-HHHHHHHHhcCCCEEEEE
Q 012511 170 VIASYVLGEVPSLQDR-ITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 170 Vias~vL~el~~~~~r-~~~i~~Lw~~~gG~LVlV 203 (462)
|++... .++.... +..+.++++ +||.|+++
T Consensus 147 v~~~~~---~~~~~~~~l~~~~~~Lk-pgG~l~~~ 177 (227)
T 1g8a_A 147 IFEDVA---QPTQAKILIDNAEVYLK-RGGYGMIA 177 (227)
T ss_dssp EEECCC---STTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEECCC---CHhHHHHHHHHHHHhcC-CCCEEEEE
Confidence 997654 2222222 444455554 69998886
No 144
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.71 E-value=3.1e-08 Score=100.53 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=75.4
Q ss_pred HHHHHHHCCCC-CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc
Q 012511 81 LCEVRRRLPGF-SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 81 L~eL~~rlp~~-~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~ 159 (462)
...+...++.+ .+.+|||+|||+|..+..+.+.++. .+++++|. +.|++.|+.. .++.++.. ++...
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~--~~~~~~D~-~~~~~~a~~~----~~v~~~~~-----d~~~~ 264 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPL--IKGINFDL-PQVIENAPPL----SGIEHVGG-----DMFAS 264 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHTTCCCC----TTEEEEEC-----CTTTC
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCC--CeEEEeCh-HHHHHhhhhc----CCCEEEeC-----CcccC
Confidence 34555565534 3579999999999999999988763 48999999 9998776531 22222221 22221
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
+ + .||+|+++++||++++ .....+++++.+. |||.|+|+|...+
T Consensus 265 ~--~--~~D~v~~~~~lh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 265 V--P--QGDAMILKAVCHNWSD-EKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp C--C--CEEEEEEESSGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred C--C--CCCEEEEecccccCCH-HHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 2 2 2999999999999974 4444455555443 7999999986443
No 145
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.71 E-value=3.1e-08 Score=93.75 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=70.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..+++..+ .+|+++|.|+.|++.|++.+.... ++.++.. +....++ ...+||+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~~~~-~~~~fD~ 161 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK---TDVYTIERIPELVEFAKRNLERAGVKNVHVILG-----DGSKGFP-PKAPYDV 161 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC---SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-----CGGGCCG-GGCCEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC-----CcccCCC-CCCCccE
Confidence 457999999999999888887654 589999999999999998875432 2222221 1211222 2345999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
|+++.++++++. .+.++++ +||.|++.-+..
T Consensus 162 Ii~~~~~~~~~~------~~~~~L~-pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIPE------PLIEQLK-IGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCCH------HHHHTEE-EEEEEEEEECSS
T ss_pred EEECCcHHHHHH------HHHHhcC-CCcEEEEEEecC
Confidence 999999999862 2334444 699998876543
No 146
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.70 E-value=2.3e-07 Score=90.07 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=57.6
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNK 158 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~ 158 (462)
+..+...++ ..+.+|||+|||+|..+..++..++ ..+|+++|+|+.|++.|+..+.... ++.++.. ++..
T Consensus 99 ~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~--~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~-----d~~~ 170 (276)
T 2b3t_A 99 VEQALARLP-EQPCRILDLGTGTGAIALALASERP--DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS-----DWFS 170 (276)
T ss_dssp HHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCT--TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC-----STTG
T ss_pred HHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc-----chhh
Confidence 334444443 3457999999999999998887775 3589999999999999998875322 2222221 1221
Q ss_pred ccCCCCCcccEEEecc
Q 012511 159 DISKSEREHDLVIASY 174 (462)
Q Consensus 159 ~l~~~~~~fDLVias~ 174 (462)
.+ ..++||+|+++.
T Consensus 171 ~~--~~~~fD~Iv~np 184 (276)
T 2b3t_A 171 AL--AGQQFAMIVSNP 184 (276)
T ss_dssp GG--TTCCEEEEEECC
T ss_pred hc--ccCCccEEEECC
Confidence 12 246899999983
No 147
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.70 E-value=6.5e-08 Score=98.24 Aligned_cols=111 Identities=10% Similarity=0.215 Sum_probs=75.9
Q ss_pred HHHHHHCCCCC-CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc
Q 012511 82 CEVRRRLPGFS-PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 82 ~eL~~rlp~~~-p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l 160 (462)
..+...++.+. ..+|||||||+|..+..+++.+|. .+++++|. +.|++.|+. ..++.++.. ++...+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~----~~~v~~~~~-----d~~~~~ 259 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPS--INAINFDL-PHVIQDAPA----FSGVEHLGG-----DMFDGV 259 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHTTCCC----CTTEEEEEC-----CTTTCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCC--CEEEEEeh-HHHHHhhhh----cCCCEEEec-----CCCCCC
Confidence 44444454343 479999999999999999998874 57999999 888876643 122322221 222222
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
+ . . |+|+++++||+++ .++...+++++.+. |||.|+|+|.-.+.
T Consensus 260 p--~-~-D~v~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 260 P--K-G-DAIFIKWICHDWS-DEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp C--C-C-SEEEEESCGGGBC-HHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred C--C-C-CEEEEechhhcCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 2 2 2 9999999999997 55555555555543 79999999976543
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.70 E-value=2.3e-08 Score=102.01 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=69.2
Q ss_pred CCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCC
Q 012511 88 LPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 88 lp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~ 164 (462)
....++.+|||+|||+|..+..+++. + ..+|++||.| .|++.|+++++.... +.++.. ++. .++..
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~-g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~-----d~~-~~~~~- 127 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA-G--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEG-----SVE-DISLP- 127 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT-T--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEES-----CGG-GCCCS-
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc-C--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEEC-----chh-hcCcC-
Confidence 34456789999999999988887774 2 3489999999 999999988764321 222221 222 12222
Q ss_pred CcccEEEecccccCCC---CHHHHHHHHHHHHhcCCCEEEEE
Q 012511 165 REHDLVIASYVLGEVP---SLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 165 ~~fDLVias~vL~el~---~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
++||+|++..+.+.+. .....+..+.++++ +||.|++-
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~~ 168 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLK-PTGVMYPS 168 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEE-EEEEEESS
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCC-CCeEEEEe
Confidence 7899999966555553 23444455556665 68888653
No 149
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.70 E-value=8.2e-08 Score=97.37 Aligned_cols=112 Identities=17% Similarity=0.263 Sum_probs=77.3
Q ss_pred HHHHHHHCCCCC-CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc
Q 012511 81 LCEVRRRLPGFS-PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 81 L~eL~~rlp~~~-p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~ 159 (462)
...+...++.+. ..+|||||||+|..+.++.+.+|. .+++++|. +.|++.|+. ..++.++.. ++...
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~----~~~v~~~~~-----D~~~~ 256 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPT--IKGVNFDL-PHVISEAPQ----FPGVTHVGG-----DMFKE 256 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHTTCCC----CTTEEEEEC-----CTTTC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCC--CeEEEecC-HHHHHhhhh----cCCeEEEeC-----CcCCC
Confidence 345555555343 479999999999999999998874 47999999 888876543 122222221 22222
Q ss_pred cCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCC
Q 012511 160 ISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQ 209 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~ 209 (462)
++ . . |+|+++++||+++ .++...+++++.+. |||.|+|+|.-.+.
T Consensus 257 ~p--~-~-D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 257 VP--S-G-DTILMKWILHDWS-DQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp CC--C-C-SEEEEESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CC--C-C-CEEEehHHhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 22 2 2 9999999999997 55555566665553 79999999976544
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.70 E-value=3.9e-08 Score=95.22 Aligned_cols=103 Identities=19% Similarity=0.213 Sum_probs=70.8
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-----CCCCceecchhHhhhhhccCCCCC
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-----KDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-----~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
..+.+|||+|||+|..+.+++..++ ...+++++|.|+.|++.|++.+... .++.++.. ++.. .+....
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~-----d~~~-~~~~~~ 170 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVG-PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-----DLAD-SELPDG 170 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-----CGGG-CCCCTT
T ss_pred CCCCEEEEEcccccHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC-----chHh-cCCCCC
Confidence 3457999999999999888887543 2468999999999999999887532 22222221 2221 223356
Q ss_pred cccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 166 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 166 ~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+||+|++. ++++...+..+.++++ +||.|+++.+.
T Consensus 171 ~~D~v~~~-----~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 205 (280)
T 1i9g_A 171 SVDRAVLD-----MLAPWEVLDAVSRLLV-AGGVLMVYVAT 205 (280)
T ss_dssp CEEEEEEE-----SSCGGGGHHHHHHHEE-EEEEEEEEESS
T ss_pred ceeEEEEC-----CcCHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 89999983 3445555555666665 69999998874
No 151
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.70 E-value=2.4e-08 Score=100.52 Aligned_cols=101 Identities=17% Similarity=0.307 Sum_probs=70.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+.+.+|. .+++++|. +.|++.|+.. .++.++.. ++...++ .||+|+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~----~~v~~~~~-----d~~~~~p----~~D~v~ 251 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPK--LKCIVFDR-PQVVENLSGS----NNLTYVGG-----DMFTSIP----NADAVL 251 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT--CEEEEEEC-HHHHTTCCCB----TTEEEEEC-----CTTTCCC----CCSEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCC--CeEEEeeC-HHHHhhcccC----CCcEEEec-----cccCCCC----CccEEE
Confidence 3479999999999999999988863 48999999 9998876542 22222221 2211222 399999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhc--C---CCEEEEEecCCCC
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDL--T---RDVLVLVEPGTPQ 209 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~--~---gG~LVlVEpGtp~ 209 (462)
++++||++++. +...+++++.+. + ||.|+|+|...+.
T Consensus 252 ~~~~lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 252 LKYILHNWTDK-DCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred eehhhccCCHH-HHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 99999999744 333444444432 7 9999999975543
No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.70 E-value=2.7e-08 Score=94.89 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=66.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhc--------CCCCCCceecchhHhhhhhccC--
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQ--------GPKDLPLIHSYNSIQALNKDIS-- 161 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~--------~~~~~~~i~~~~~~~~l~~~l~-- 161 (462)
+..+|||||||+|..+..++..++ ...|+|||+|+.|++.|+..+. ...++.++... ....++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p--~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d-----~~~~l~~~ 118 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP--DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSN-----AMKHLPNF 118 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST--TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECC-----TTTCHHHH
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECc-----HHHhhhhh
Confidence 346899999999999999888775 3589999999999999987653 12233333321 111122
Q ss_pred CCCCcccEEEecccccCCCCH--------HHHHHHHHHHHhcCCCEEEEEec
Q 012511 162 KSEREHDLVIASYVLGEVPSL--------QDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~--------~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
...++||+|++.+...+.... ...+..+.++++ +||.|+++-.
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lk-pGG~l~~~td 169 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLR-VGGLVYTITD 169 (235)
T ss_dssp CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCC-CCCEEEEEeC
Confidence 345789999876543332211 123344455554 6999998654
No 153
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.70 E-value=3.4e-08 Score=96.00 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=70.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-C--CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-K--DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-~--~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+..+++... ...+++++|.|+.|++.|++.+... + ++.++.. ++.. +...++|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~-----d~~~--~~~~~~f 180 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-----DIAD--FISDQMY 180 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-----CTTT--CCCSCCE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC-----chhc--cCcCCCc
Confidence 3457999999999999888887532 1468999999999999999988654 2 2222221 2222 2234689
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|+|++ ++++....+..+.++++ +||.|+++.+.
T Consensus 181 D~Vi~-----~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 213 (275)
T 1yb2_A 181 DAVIA-----DIPDPWNHVQKIASMMK-PGSVATFYLPN 213 (275)
T ss_dssp EEEEE-----CCSCGGGSHHHHHHTEE-EEEEEEEEESS
T ss_pred cEEEE-----cCcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 99998 45555544444444444 79999998864
No 154
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.69 E-value=6.1e-08 Score=95.96 Aligned_cols=106 Identities=13% Similarity=0.126 Sum_probs=66.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC------CCCCCceecchhHhhhhhccCC-CC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG------PKDLPLIHSYNSIQALNKDISK-SE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~------~~~~~~i~~~~~~~~l~~~l~~-~~ 164 (462)
.+.+|||+|||+|..+..+++..+ ..+|++||+|+.|++.|++.+.. ..++.++.. +....+.. ..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-----D~~~~~~~~~~ 167 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGT--VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG-----DGLAFVRQTPD 167 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTT--CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-----CHHHHHHSSCT
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCC--CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-----cHHHHHHhccC
Confidence 468999999999999988886432 46899999999999999987621 112222221 11111111 35
Q ss_pred CcccEEEecccccCCCCH----HHHHHHHHHHHhcCCCEEEEEec
Q 012511 165 REHDLVIASYVLGEVPSL----QDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~----~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
++||+|++.......+.. .+....+.++++ +||.|++...
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 211 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILK-PDGICCNQGE 211 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEecC
Confidence 689999997665443311 234455555554 6999988754
No 155
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.69 E-value=4.9e-08 Score=96.39 Aligned_cols=105 Identities=12% Similarity=0.165 Sum_probs=64.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-------CCCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-------KDLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-------~~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.|.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.+... .++.++.. +....+....
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~-----D~~~~l~~~~ 155 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKN--VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID-----DGVNFVNQTS 155 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTT--CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECS-----CSCC---CCC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCC--CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEC-----hHHHHHhhcC
Confidence 478999999999999988887543 578999999999999999876421 12222221 1111122235
Q ss_pred CcccEEEecccccCCCCH----HHHHHHHHHHHhcCCCEEEEEe
Q 012511 165 REHDLVIASYVLGEVPSL----QDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~----~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
++||+||+.......+.. .+....+.++++ +||.|++--
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lk-pgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHHHhcC-CCCEEEEec
Confidence 789999995543322211 233344444444 699988754
No 156
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.68 E-value=2.9e-08 Score=92.79 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=68.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccC--CCCCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDIS--KSERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~--~~~~~ 166 (462)
++.+|||+|||+|..+..++..++. ..+|+++|.|+.|++.|++.++... + +.++.... ...+. .+. ...++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPK-DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA-KDTLA-ELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH-HHHHH-HHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCC-CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH-HHHHH-HhhhccCCCC
Confidence 3579999999999999988887762 4699999999999999999876432 1 22332211 11111 111 11268
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
||+|++..... .....+..+.++++ +||+||+-+.
T Consensus 141 fD~v~~~~~~~---~~~~~l~~~~~~L~-pgG~lv~~~~ 175 (225)
T 3tr6_A 141 YDLIYIDADKA---NTDLYYEESLKLLR-EGGLIAVDNV 175 (225)
T ss_dssp EEEEEECSCGG---GHHHHHHHHHHHEE-EEEEEEEECS
T ss_pred ccEEEECCCHH---HHHHHHHHHHHhcC-CCcEEEEeCC
Confidence 99999665321 22333444445554 6999987554
No 157
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.68 E-value=5.4e-08 Score=97.83 Aligned_cols=106 Identities=21% Similarity=0.237 Sum_probs=74.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+..++...+ ..+|+++|.|+.|++.|++.+.... ...++.. +.. ....++||+|
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~-----d~~---~~~~~~fD~I 265 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP--KIRLTLCDVSAPAVEASRATLAANGVEGEVFAS-----NVF---SEVKGRFDMI 265 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT--TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC-----STT---TTCCSCEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc-----ccc---ccccCCeeEE
Confidence 357999999999999988887654 2489999999999999998875432 1111111 111 1235689999
Q ss_pred EecccccCCC--CHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 171 IASYVLGEVP--SLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~--~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
+++..+++.. +......+++.+.+. +||.|+++.+..
T Consensus 266 v~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 266 ISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp EECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred EECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 9999988632 133345566666553 799999998754
No 158
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.68 E-value=3.4e-08 Score=99.37 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=66.2
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.++.+|||+|||+|..+..+++. + ..+|++||.|+ |++.|++.++..+ ++.++.. ++. .++...++|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~-----d~~-~~~~~~~~~ 132 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-G--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKG-----KIE-EVHLPVEKV 132 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEES-----CTT-TSCCSCSCE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-C--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEe-----eHH-HhcCCCCcE
Confidence 45689999999999988887774 2 35899999996 9999998875432 2222221 121 123345789
Q ss_pred cEEEecc---cccCCCCHHHHHHHHHHHHhcCCCEEE
Q 012511 168 DLVIASY---VLGEVPSLQDRITIVRQLWDLTRDVLV 201 (462)
Q Consensus 168 DLVias~---vL~el~~~~~r~~~i~~Lw~~~gG~LV 201 (462)
|+|++.. .+.+.......+..+.++++ +||.++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 9999866 44444333444445556665 689887
No 159
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.68 E-value=8.1e-08 Score=89.93 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=69.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-------CCCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-------KDLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-------~~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.+.+|||+|||+|..+..+++.++ ...+|+++|+|+.|++.+++.+... .++.++.. +... .....
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~~-~~~~~ 149 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVG-CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-----DGRM-GYAEE 149 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-----CGGG-CCGGG
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC-----Cccc-CcccC
Confidence 357999999999999888887654 2358999999999999999876542 22222221 1221 11234
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
.+||+|++...+.++.. .+.++++ +||.||+...
T Consensus 150 ~~fD~i~~~~~~~~~~~------~~~~~Lk-pgG~lv~~~~ 183 (226)
T 1i1n_A 150 APYDAIHVGAAAPVVPQ------ALIDQLK-PGGRLILPVG 183 (226)
T ss_dssp CCEEEEEECSBBSSCCH------HHHHTEE-EEEEEEEEES
T ss_pred CCcCEEEECCchHHHHH------HHHHhcC-CCcEEEEEEe
Confidence 67999999999988851 2344554 6999998765
No 160
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.68 E-value=5.3e-08 Score=90.34 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..++..++. ..+|+++|+|+.|++.|++.++... .+.++.. +....++...+ ||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~~-fD 128 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISI-SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-----DPLGIAAGQRD-ID 128 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-----CHHHHHTTCCS-EE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-----cHHHHhccCCC-CC
Confidence 3579999999999999888887652 4689999999999999998775422 1222221 11111222235 99
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+|++... ..+....+..+.++++ +||.||+-+
T Consensus 129 ~v~~~~~---~~~~~~~l~~~~~~Lk-pgG~lv~~~ 160 (210)
T 3c3p_A 129 ILFMDCD---VFNGADVLERMNRCLA-KNALLIAVN 160 (210)
T ss_dssp EEEEETT---TSCHHHHHHHHGGGEE-EEEEEEEES
T ss_pred EEEEcCC---hhhhHHHHHHHHHhcC-CCeEEEEEC
Confidence 9998743 2223333333344443 689887643
No 161
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.67 E-value=1.1e-07 Score=88.74 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=66.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccC-CCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDIS-KSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~-~~~~~f 167 (462)
++.+|||+|||+|..+..++..++. ..+|+++|.|+.|++.|++.+...+ + +.++.... ...+. .++ ....+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSS-GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA-LDSLQ-QIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCS-SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH-HHHHH-HHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH-HHHHH-HHHhcCCCCc
Confidence 3579999999999999988887752 4699999999999999998876432 1 22222211 11111 111 112579
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|+|++...... ....+..+.++++ +||.||+-+
T Consensus 135 D~v~~d~~~~~---~~~~l~~~~~~L~-pgG~lv~~~ 167 (223)
T 3duw_A 135 DFIFIDADKQN---NPAYFEWALKLSR-PGTVIIGDN 167 (223)
T ss_dssp SEEEECSCGGG---HHHHHHHHHHTCC-TTCEEEEES
T ss_pred CEEEEcCCcHH---HHHHHHHHHHhcC-CCcEEEEeC
Confidence 99998765322 2233334444443 799777643
No 162
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.66 E-value=2.9e-07 Score=92.88 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=75.8
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
..+|||||||+|..+.++++.+|. .++++.|. +.+++.|++.+.... ++.++.. ++-. .+...+|+|
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~--~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~g-----D~~~---~~~~~~D~~ 248 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPG--CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEG-----DFFK---DPLPEADLY 248 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSS--CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEES-----CTTT---SCCCCCSEE
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCC--ceeEeccC-HHHHHHHHHhhhhcccCceeeecC-----cccc---CCCCCceEE
Confidence 479999999999999999999984 47888897 889999998775432 2222221 1211 123468999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
++.++||..+ +++...+++++.+. |||.|+|+|.-.+
T Consensus 249 ~~~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 249 ILARVLHDWA-DGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EEESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred EeeeecccCC-HHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 9999999997 55556666666653 8999999997543
No 163
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.65 E-value=8.1e-08 Score=92.43 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=67.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC-CCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD-LPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~-~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|..+.+++.. + .+|+++|+|+.|++.|++.+..... +.++.. ++...+ ...+||+|
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~-g---~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~-----d~~~~~--~~~~fD~V 188 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL-G---GKALGVDIDPMVLPQAEANAKRNGVRPRFLEG-----SLEAAL--PFGPFDLL 188 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T---CEEEEEESCGGGHHHHHHHHHHTTCCCEEEES-----CHHHHG--GGCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHh-C---CeEEEEECCHHHHHHHHHHHHHcCCcEEEEEC-----ChhhcC--cCCCCCEE
Confidence 4579999999999998887773 2 2899999999999999987754321 222221 122112 24589999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
+++...+.+ ...+..+.++++ +||.|++.....
T Consensus 189 v~n~~~~~~---~~~l~~~~~~Lk-pgG~lils~~~~ 221 (254)
T 2nxc_A 189 VANLYAELH---AALAPRYREALV-PGGRALLTGILK 221 (254)
T ss_dssp EEECCHHHH---HHHHHHHHHHEE-EEEEEEEEEEEG
T ss_pred EECCcHHHH---HHHHHHHHHHcC-CCCEEEEEeecc
Confidence 997655432 223334444444 699999976543
No 164
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.65 E-value=9.9e-08 Score=91.53 Aligned_cols=115 Identities=10% Similarity=0.130 Sum_probs=72.3
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQA 155 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~ 155 (462)
.+|..+... ..+.+|||+|||+|..+..++..++. ..+++++|.|+.|++.|++.++..+. +.++... ....
T Consensus 69 ~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd-a~~~ 143 (247)
T 1sui_A 69 QFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPE-DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP-ALPV 143 (247)
T ss_dssp HHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCT-TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC-HHHH
T ss_pred HHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC-HHHH
Confidence 344444433 24689999999999998888887763 46999999999999999998764321 2222211 0111
Q ss_pred hhhccC-C--CCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 156 LNKDIS-K--SEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 156 l~~~l~-~--~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+. .+. . ..++||+|++.... .+.......+.++++ +||.||+-
T Consensus 144 l~-~l~~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk-pGG~lv~d 189 (247)
T 1sui_A 144 LD-EMIKDEKNHGSYDFIFVDADK---DNYLNYHKRLIDLVK-VGGVIGYD 189 (247)
T ss_dssp HH-HHHHSGGGTTCBSEEEECSCS---TTHHHHHHHHHHHBC-TTCCEEEE
T ss_pred HH-HHHhccCCCCCEEEEEEcCch---HHHHHHHHHHHHhCC-CCeEEEEe
Confidence 11 110 0 14689999987542 233344445555554 79988764
No 165
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.64 E-value=4.2e-08 Score=98.97 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=67.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
++.+|||+|||+|..+..+++. + ..+|++||.| .|++.|+++++... + +.++.. ++. .++.+.++||
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g--~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~-----d~~-~~~~~~~~fD 135 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-G--ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKG-----KVE-EVELPVEKVD 135 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-T--CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEES-----CTT-TCCCSSSCEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-C--CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEEC-----cHH-HccCCCCceE
Confidence 4579999999999988888874 2 4589999999 59999998876432 1 222221 122 1233457999
Q ss_pred EEEeccc---ccCCCCHHHHHHHHHHHHhcCCCEEE
Q 012511 169 LVIASYV---LGEVPSLQDRITIVRQLWDLTRDVLV 201 (462)
Q Consensus 169 LVias~v---L~el~~~~~r~~~i~~Lw~~~gG~LV 201 (462)
+|++..+ +.+.......+..+.++++ +||.|+
T Consensus 136 ~Iis~~~~~~l~~~~~~~~~l~~~~r~Lk-pgG~li 170 (349)
T 3q7e_A 136 IIISEWMGYCLFYESMLNTVLHARDKWLA-PDGLIF 170 (349)
T ss_dssp EEEECCCBBTBTBTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred EEEEccccccccCchhHHHHHHHHHHhCC-CCCEEc
Confidence 9998665 4343455555566667775 689876
No 166
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.64 E-value=7.5e-08 Score=92.59 Aligned_cols=106 Identities=16% Similarity=0.156 Sum_probs=66.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccC-CCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDIS-KSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~-~~~~~f 167 (462)
.+.+|||+|||+|..+..++...+ .+|++||+++.|++.|++.+.... ++.++.. ++..... ...++|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~---~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~-----D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK---AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY-----DLKKITDLIPKERA 120 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC---CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS-----CGGGGGGTSCTTCE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC---CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC-----cHHHhhhhhccCCc
Confidence 467999999999999988887533 389999999999999998876432 1222222 1221111 235789
Q ss_pred cEEEecccccCC-----CCH---------------HHHHHHHHHHHhcCCCEEEEEecC
Q 012511 168 DLVIASYVLGEV-----PSL---------------QDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el-----~~~---------------~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|+|+++-..... .+. ...+..+.++++ +||.|+++-+.
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 178 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVHRP 178 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEECT
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEEcH
Confidence 999996433222 111 122333444443 79999998653
No 167
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.63 E-value=1.2e-07 Score=91.95 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=70.1
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+..++...+ ...+++++|.|+.+++.|++.+.... ++.++. .++...+ ..++|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~--~~~~~ 182 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVG-SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV-----RDISEGF--DEKDV 182 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTT-TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC-----CCGGGCC--SCCSE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE-----CCHHHcc--cCCcc
Confidence 3457999999999999988887643 24689999999999999998875432 111111 1222222 34579
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|+|++. .++....+..+.++++ +||.|++..+.
T Consensus 183 D~V~~~-----~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 215 (277)
T 1o54_A 183 DALFLD-----VPDPWNYIDKCWEALK-GGGRFATVCPT 215 (277)
T ss_dssp EEEEEC-----CSCGGGTHHHHHHHEE-EEEEEEEEESS
T ss_pred CEEEEC-----CcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 999983 3445454555556655 69999998864
No 168
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.62 E-value=7.1e-08 Score=90.96 Aligned_cols=101 Identities=11% Similarity=0.164 Sum_probs=66.9
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCC--CCcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKS--EREH 167 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~--~~~f 167 (462)
+.+|||+|||+|..+..++..++ ..+|+++|+|+.|++.|+..+.... ++.++.. +....++.. .++|
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~~~~~f 127 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFG-----DALQLGEKLELYPLF 127 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-----CGGGSHHHHTTSCCE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-----CHHHHHHhcccCCCc
Confidence 57999999999999988888775 3689999999999999998875432 1222221 111111111 4689
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|+|++...+. .....+..+.++++ +||.||+.+
T Consensus 128 D~I~~~~~~~---~~~~~l~~~~~~L~-pgG~lv~~~ 160 (233)
T 2gpy_A 128 DVLFIDAAKG---QYRRFFDMYSPMVR-PGGLILSDN 160 (233)
T ss_dssp EEEEEEGGGS---CHHHHHHHHGGGEE-EEEEEEEET
T ss_pred cEEEECCCHH---HHHHHHHHHHHHcC-CCeEEEEEc
Confidence 9999987754 23333333333333 689888754
No 169
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.62 E-value=5.2e-09 Score=99.15 Aligned_cols=79 Identities=14% Similarity=0.022 Sum_probs=58.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+..++.. ..+|+++|.|+.|++.|+..+.... ++.++.. ++.. ++ ...+||
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~-~~-~~~~~D 146 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT----GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICG-----DFLL-LA-SFLKAD 146 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-----CHHH-HG-GGCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC-----ChHH-hc-ccCCCC
Confidence 3579999999999999888873 3689999999999999998876432 2222222 1221 11 346899
Q ss_pred EEEecccccCCCC
Q 012511 169 LVIASYVLGEVPS 181 (462)
Q Consensus 169 LVias~vL~el~~ 181 (462)
+|+++..++++..
T Consensus 147 ~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 147 VVFLSPPWGGPDY 159 (241)
T ss_dssp EEEECCCCSSGGG
T ss_pred EEEECCCcCCcch
Confidence 9999999888753
No 170
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.62 E-value=6.3e-08 Score=89.84 Aligned_cols=88 Identities=15% Similarity=0.233 Sum_probs=62.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+..+. .+++++|+|+. ++.++.. ++. .++...++||+|+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-------~~v~~~D~s~~-------------~~~~~~~-----d~~-~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-------NPVHCFDLASL-------------DPRVTVC-----DMA-QVPLEDESVDVAV 120 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-------SCEEEEESSCS-------------STTEEES-----CTT-SCSCCTTCEEEEE
T ss_pred CCCeEEEECCcCCHHHHHhh-------ccEEEEeCCCC-------------CceEEEe-----ccc-cCCCCCCCEeEEE
Confidence 35799999999999776552 47999999987 1222221 121 1334467899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
++++|++ .+....+..+.++++ +||.|++++...
T Consensus 121 ~~~~l~~-~~~~~~l~~~~~~L~-~gG~l~i~~~~~ 154 (215)
T 2zfu_A 121 FCLSLMG-TNIRDFLEEANRVLK-PGGLLKVAEVSS 154 (215)
T ss_dssp EESCCCS-SCHHHHHHHHHHHEE-EEEEEEEEECGG
T ss_pred Eehhccc-cCHHHHHHHHHHhCC-CCeEEEEEEcCC
Confidence 9999975 566666666666665 699999998754
No 171
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.62 E-value=1e-07 Score=87.84 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=65.6
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
++.+|||+|||+|..+..++..++ ..+++++|+|+.|++.++..+.... ++.++.. ++.. .+ ..++||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~-~~-~~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP--EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQS-----RVEE-FP-SEPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEC-----CTTT-SC-CCSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEec-----chhh-CC-ccCCcCE
Confidence 357999999999998888888765 3589999999999999998775432 2222221 1221 11 2468999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|++.. +.+....+..+.++++ +||.|++..
T Consensus 136 i~~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~ 165 (207)
T 1jsx_A 136 VISRA----FASLNDMVSWCHHLPG-EQGRFYALK 165 (207)
T ss_dssp EECSC----SSSHHHHHHHHTTSEE-EEEEEEEEE
T ss_pred EEEec----cCCHHHHHHHHHHhcC-CCcEEEEEe
Confidence 99754 2333333333333333 689988874
No 172
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.60 E-value=1.5e-07 Score=89.84 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=63.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||||..+..+++..+. ..+|+++|.|+.|++......+...++..+..... ... .......+||+|+
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~-~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~--~~~-~~~~~~~~~D~I~ 151 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIEL-NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADAR--FPQ-SYKSVVENVDVLY 151 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTT-TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTT--CGG-GTTTTCCCEEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCC-CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccc--cch-hhhccccceEEEE
Confidence 4579999999999988888887652 46999999999986543333322233333222110 000 0011235899999
Q ss_pred ecccccCCCCHHHH-HHHHHHHHhcCCCEEEEEecC
Q 012511 172 ASYVLGEVPSLQDR-ITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 172 as~vL~el~~~~~r-~~~i~~Lw~~~gG~LVlVEpG 206 (462)
+...+ ++.... ...+.++++ +||.||+....
T Consensus 152 ~d~a~---~~~~~il~~~~~~~Lk-pGG~lvisik~ 183 (232)
T 3id6_C 152 VDIAQ---PDQTDIAIYNAKFFLK-VNGDMLLVIKA 183 (232)
T ss_dssp ECCCC---TTHHHHHHHHHHHHEE-EEEEEEEEEC-
T ss_pred ecCCC---hhHHHHHHHHHHHhCC-CCeEEEEEEcc
Confidence 87553 333222 223444554 69999987543
No 173
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=1.3e-07 Score=91.32 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=68.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC---CCC---CCceecchhHhhhhhcc-----
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG---PKD---LPLIHSYNSIQALNKDI----- 160 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~---~~~---~~~i~~~~~~~~l~~~l----- 160 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+++.|++.|++.+.. ..- +.++.. ++....
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~-----D~~~~~~~~~~ 108 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE--KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEA-----DVTLRAKARVE 108 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT--TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEEC-----CTTCCHHHHHH
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeC-----CHHHHhhhhhh
Confidence 457999999999999988888765 36899999999999999998765 321 122221 111110
Q ss_pred -CCCCCcccEEEecccccCC------------------CCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 161 -SKSEREHDLVIASYVLGEV------------------PSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 161 -~~~~~~fDLVias~vL~el------------------~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
.....+||+|+++-..... ......+..+.++++ +||.|+++-+.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 172 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLISRP 172 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEE-EEEEEEEEECG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEEcH
Confidence 1235689999997322211 012233344445554 69999987653
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.60 E-value=1e-07 Score=95.37 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=65.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
++.+|||+|||+|..+..+++. + ..+|++||.| .|++.|++.++... .+.++.. ++. .++.+.++||
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g--~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~-----d~~-~~~~~~~~~D 107 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-G--AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRG-----KLE-DVHLPFPKVD 107 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-C--CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEES-----CTT-TSCCSSSCEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-C--CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEEC-----chh-hccCCCCccc
Confidence 3579999999999988877763 2 3589999999 69999998875432 1222221 121 1233346899
Q ss_pred EEEeccc---ccCCCCHHHHHHHHHHHHhcCCCEEE
Q 012511 169 LVIASYV---LGEVPSLQDRITIVRQLWDLTRDVLV 201 (462)
Q Consensus 169 LVias~v---L~el~~~~~r~~~i~~Lw~~~gG~LV 201 (462)
+|++..+ |.+.......+..+.++++ +||.++
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 142 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLV-EGGLIF 142 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcC-CCeEEE
Confidence 9998754 3333334444455556665 689886
No 175
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.60 E-value=7.9e-08 Score=90.70 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=63.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhh--ccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNK--DISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~--~l~~~~~~fDL 169 (462)
...+|||+|||+|..+..+++.++ ...+|+++|.|+.|++.+.+.++...++.++.. ++.. .++....+||+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g-~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~-----d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVG-PDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIE-----DARHPHKYRMLIAMVDV 150 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHCTTEEEECS-----CTTCGGGGGGGCCCEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHhhccCCeEEEEc-----ccCChhhhcccCCcEEE
Confidence 357999999999999988888663 135899999998877666655543233332221 1111 12223568999
Q ss_pred EEecccccCCCCHHH-HHHHHHHHHhcCCCEEEEE
Q 012511 170 VIASYVLGEVPSLQD-RITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 170 Vias~vL~el~~~~~-r~~~i~~Lw~~~gG~LVlV 203 (462)
|++... .++... .+..+.++++ +||.|++.
T Consensus 151 V~~~~~---~~~~~~~~~~~~~~~Lk-pgG~l~i~ 181 (233)
T 2ipx_A 151 IFADVA---QPDQTRIVALNAHTFLR-NGGHFVIS 181 (233)
T ss_dssp EEECCC---CTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEEcCC---CccHHHHHHHHHHHHcC-CCeEEEEE
Confidence 998544 222211 1333444554 69988884
No 176
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.59 E-value=8.8e-08 Score=90.01 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=68.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCC----CccEEEEEeCCHHHHHHHHHhhcCC-------CCCCceecchhHhhhhhccC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPR----SLEKVNLVEPSQSMQRAGQSLMQGP-------KDLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~----~~~~v~~VD~S~~ml~~Ak~ll~~~-------~~~~~i~~~~~~~~l~~~l~ 161 (462)
..+|||+|||+|..+..+++..+. ...+|+++|.|+.|++.|++.+... .++.++.. +....++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~~~~~ 159 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-----DGRKGYP 159 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES-----CGGGCCG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC-----CcccCCC
Confidence 479999999999988887775431 0148999999999999999876532 12222221 1222222
Q ss_pred CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 162 KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
...+||+|++..+++++. ..+.++++ +||.||+.-.
T Consensus 160 -~~~~fD~I~~~~~~~~~~------~~~~~~Lk-pgG~lvi~~~ 195 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAPDTP------TELINQLA-SGGRLIVPVG 195 (227)
T ss_dssp -GGCSEEEEEECSCBSSCC------HHHHHTEE-EEEEEEEEES
T ss_pred -cCCCccEEEECCchHHHH------HHHHHHhc-CCCEEEEEEe
Confidence 236899999999999986 12334444 6999988654
No 177
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.59 E-value=1e-07 Score=96.03 Aligned_cols=108 Identities=16% Similarity=0.214 Sum_probs=69.2
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhh
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNK 158 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~ 158 (462)
..|...+...++.+|||+|||+|..+..++.. + ..+|++||.|+ |++.|+++++..+ ++.++.. ++..
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g--~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~-----d~~~ 110 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-G--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPG-----KVEE 110 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-T--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEES-----CTTT
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC-C--CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-----chhh
Confidence 34444444456689999999999988877763 2 35899999995 8899988775432 2222221 1221
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHH---HHHHhcCCCEEEE
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIV---RQLWDLTRDVLVL 202 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i---~~Lw~~~gG~LVl 202 (462)
++ ..++||+|++..+++++... .....+ .++++ +||.+++
T Consensus 111 -~~-~~~~~D~Ivs~~~~~~~~~~-~~~~~l~~~~~~Lk-pgG~li~ 153 (348)
T 2y1w_A 111 -VS-LPEQVDIIISEPMGYMLFNE-RMLESYLHAKKYLK-PSGNMFP 153 (348)
T ss_dssp -CC-CSSCEEEEEECCCBTTBTTT-SHHHHHHHGGGGEE-EEEEEES
T ss_pred -CC-CCCceeEEEEeCchhcCChH-HHHHHHHHHHhhcC-CCeEEEE
Confidence 22 23589999999888877532 223333 34443 6888874
No 178
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.59 E-value=1.4e-07 Score=94.29 Aligned_cols=103 Identities=15% Similarity=0.196 Sum_probs=65.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC------CCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP------KDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~------~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++...+ ..++++||+|+.|++.|++.+... .++.++.. +....++...+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-----D~~~~l~~~~~ 188 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKS--VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-----DASKFLENVTN 188 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTT--CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-----CHHHHHHHCCS
T ss_pred CCCEEEEEcCCccHHHHHHHHcCC--CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-----cHHHHHhhcCC
Confidence 468999999999999988876433 468999999999999999987642 11222221 11111212246
Q ss_pred cccEEEecccccCCCCH-----HHHHHHHHHHHhcCCCEEEEE
Q 012511 166 EHDLVIASYVLGEVPSL-----QDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 166 ~fDLVias~vL~el~~~-----~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+||+|++.... .+... .+....+.++++ +||.|++.
T Consensus 189 ~fDvIi~d~~~-p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~ 229 (321)
T 2pt6_A 189 TYDVIIVDSSD-PIGPAETLFNQNFYEKIYNALK-PNGYCVAQ 229 (321)
T ss_dssp CEEEEEEECCC-SSSGGGGGSSHHHHHHHHHHEE-EEEEEEEE
T ss_pred CceEEEECCcC-CCCcchhhhHHHHHHHHHHhcC-CCcEEEEE
Confidence 89999986432 11101 233445555554 68988874
No 179
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.58 E-value=7.5e-08 Score=94.82 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=63.7
Q ss_pred CCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhh-hccCCCCCccc
Q 012511 90 GFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALN-KDISKSEREHD 168 (462)
Q Consensus 90 ~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~-~~l~~~~~~fD 168 (462)
...+.+|||+|||||.++..+++. ...+|++||.|+.|++.+...-. ...... ......+. ..+ +...||
T Consensus 83 ~~~g~~vLDiGcGTG~~t~~L~~~---ga~~V~aVDvs~~mL~~a~r~~~---rv~~~~-~~ni~~l~~~~l--~~~~fD 153 (291)
T 3hp7_A 83 SVEDMITIDIGASTGGFTDVMLQN---GAKLVYAVDVGTNQLVWKLRQDD---RVRSME-QYNFRYAEPVDF--TEGLPS 153 (291)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCSEEEEECSSSSCSCHHHHTCT---TEEEEC-SCCGGGCCGGGC--TTCCCS
T ss_pred CccccEEEecCCCccHHHHHHHhC---CCCEEEEEECCHHHHHHHHHhCc---ccceec-ccCceecchhhC--CCCCCC
Confidence 345679999999999999777763 24589999999999987543211 110000 00011111 112 233599
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+|++..+++.+ ...+..+.++++ |||.||++
T Consensus 154 ~v~~d~sf~sl---~~vL~e~~rvLk-pGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFISL---NLILPALAKILV-DGGQVVAL 184 (291)
T ss_dssp EEEECCSSSCG---GGTHHHHHHHSC-TTCEEEEE
T ss_pred EEEEEeeHhhH---HHHHHHHHHHcC-cCCEEEEE
Confidence 99998888766 334555666665 79998886
No 180
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.58 E-value=1.4e-07 Score=92.45 Aligned_cols=105 Identities=14% Similarity=0.167 Sum_probs=67.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC------CCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK------DLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~------~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++...+ ..++++||+|+.|++.|++.+.... ++.++.. +....++...+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-----D~~~~l~~~~~ 150 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKS--VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-----DASKFLENVTN 150 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT--CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-----CHHHHHHHCCS
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCC--CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-----ChHHHHHhCCC
Confidence 568999999999999988876433 4699999999999999999876431 1222221 11111111256
Q ss_pred cccEEEecccccCCCCH----HHHHHHHHHHHhcCCCEEEEEe
Q 012511 166 EHDLVIASYVLGEVPSL----QDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 166 ~fDLVias~vL~el~~~----~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+||+|++.......+.. .+....+.++++ +||.|++.-
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~ 192 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQC 192 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEE-EEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEC
Confidence 89999985443222211 244455555554 689988753
No 181
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.57 E-value=1.4e-07 Score=93.91 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=70.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC------CCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP------KDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~------~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.+... .++.++.. +....++...+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~--~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-----D~~~~l~~~~~ 180 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHES--VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-----DGFEFLKNHKN 180 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTT--CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-----CHHHHHHHCTT
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCC--CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-----hHHHHHHhcCC
Confidence 468999999999999988877543 468999999999999999987542 11222211 11111222356
Q ss_pred cccEEEecccccCCCCH-----HHHHHHHHHHHhcCCCEEEEEecCCCCc-hHHHHHHHHH
Q 012511 166 EHDLVIASYVLGEVPSL-----QDRITIVRQLWDLTRDVLVLVEPGTPQG-SSIISQMRSH 220 (462)
Q Consensus 166 ~fDLVias~vL~el~~~-----~~r~~~i~~Lw~~~gG~LVlVEpGtp~G-f~~I~~aR~~ 220 (462)
+||+|++.... ++... .+....+.++++ +||.|++- .|++.. -..+..+++.
T Consensus 181 ~fD~Ii~d~~~-~~~~~~~l~t~~~l~~~~~~Lk-pgG~lv~~-~~~~~~~~~~~~~~~~~ 238 (314)
T 2b2c_A 181 EFDVIITDSSD-PVGPAESLFGQSYYELLRDALK-EDGILSSQ-GESVWLHLPLIAHLVAF 238 (314)
T ss_dssp CEEEEEECCC--------------HHHHHHHHEE-EEEEEEEE-CCCTTTCHHHHHHHHHH
T ss_pred CceEEEEcCCC-CCCcchhhhHHHHHHHHHhhcC-CCeEEEEE-CCCcccCHHHHHHHHHH
Confidence 89999986532 22111 223334444444 68888764 455432 2334444444
No 182
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.57 E-value=1.1e-07 Score=94.24 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=71.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC------CCCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG------PKDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~------~~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++...+ ..++++||+|+.|++.|++.+.. ..++.++.. +....++...+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-----Da~~~l~~~~~ 167 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPS--VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-----DGFEFMKQNQD 167 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT--CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-----CHHHHHHTCSS
T ss_pred CCCEEEEECCCchHHHHHHHHcCC--CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-----cHHHHHhhCCC
Confidence 568999999999999988876533 46899999999999999987642 122222221 11111222356
Q ss_pred cccEEEecccccCCCC----HHHHHHHHHHHHhcCCCEEEEEecCCCC-chHHHHHHHHHH
Q 012511 166 EHDLVIASYVLGEVPS----LQDRITIVRQLWDLTRDVLVLVEPGTPQ-GSSIISQMRSHI 221 (462)
Q Consensus 166 ~fDLVias~vL~el~~----~~~r~~~i~~Lw~~~gG~LVlVEpGtp~-Gf~~I~~aR~~l 221 (462)
+||+|++......-+. ..+....+.++++ +||.|++-. +++. .-..+..+++.+
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~-~~~~~~~~~~~~~~~~l 226 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALK-EDGVLCCQG-ECQWLHLDLIKEMRQFC 226 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEE-EEEEEEEEE-ECTTTCHHHHHHHHHHH
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccC-CCeEEEEec-CCcccchHHHHHHHHHH
Confidence 8999998654322111 1223444455554 689888754 2332 223444444443
No 183
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.57 E-value=2.1e-08 Score=95.95 Aligned_cols=106 Identities=14% Similarity=0.206 Sum_probs=67.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccC--CCCCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDIS--KSERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~--~~~~~ 166 (462)
++.+|||+|||+|..+..++..++. ..+|++||+|+.|++.|++.++..+ ++.++.... ...+. .+. ...++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda-~~~l~-~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPD-DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA-LDTLH-SLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCT-TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH-HHHHH-HHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH-HHHHH-HHhhccCCCC
Confidence 3579999999999999888887752 4699999999999999998876432 222332211 11111 110 01468
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
||+|++..... +....++.+.++++ +||.||+-+
T Consensus 137 fD~V~~d~~~~---~~~~~l~~~~~~Lk-pGG~lv~d~ 170 (242)
T 3r3h_A 137 FDFIFIDADKT---NYLNYYELALKLVT-PKGLIAIDN 170 (242)
T ss_dssp EEEEEEESCGG---GHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred EeEEEEcCChH---HhHHHHHHHHHhcC-CCeEEEEEC
Confidence 99999875421 12222334444444 689888743
No 184
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.57 E-value=1.3e-07 Score=88.63 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=70.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCC---CccEEEEEeCCHHHHHHHHHhhcCCC-------CCCceecchhHhhhhhccC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPR---SLEKVNLVEPSQSMQRAGQSLMQGPK-------DLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~---~~~~v~~VD~S~~ml~~Ak~ll~~~~-------~~~~i~~~~~~~~l~~~l~ 161 (462)
.+.+|||+|||+|..+..++...+. ...+|+++|.|+.|++.|++.+.... ++.++.. +.....+
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-----d~~~~~~ 154 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK-----NIYQVNE 154 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC-----CGGGCCH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC-----ChHhccc
Confidence 3579999999999988888876530 13489999999999999998875322 2222221 1111110
Q ss_pred ---CCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 162 ---KSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 162 ---~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
....+||+|++...++++. ..+.++++ +||.||+.-+.
T Consensus 155 ~~~~~~~~fD~I~~~~~~~~~~------~~~~~~Lk-pgG~lv~~~~~ 195 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASASELP------EILVDLLA-ENGKLIIPIEE 195 (227)
T ss_dssp HHHHHHCCEEEEEECSBBSSCC------HHHHHHEE-EEEEEEEEEEE
T ss_pred ccCccCCCcCEEEECCchHHHH------HHHHHhcC-CCcEEEEEEcc
Confidence 1245799999999999885 23344554 69999887654
No 185
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.56 E-value=8.4e-08 Score=96.76 Aligned_cols=99 Identities=16% Similarity=0.331 Sum_probs=69.1
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+.++.+.++. .+++++|. +.|++.|+. ..++.++.. ++...+ + .||+|++
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~----~~~v~~~~~-----d~~~~~--~--~~D~v~~ 257 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPH--LKCTVFDQ-PQVVGNLTG----NENLNFVGG-----DMFKSI--P--SADAVLL 257 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT--SEEEEEEC-HHHHSSCCC----CSSEEEEEC-----CTTTCC--C--CCSEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCC--CeEEEecc-HHHHhhccc----CCCcEEEeC-----ccCCCC--C--CceEEEE
Confidence 479999999999999999988863 48999999 788876543 122222221 222112 2 4999999
Q ss_pred cccccCCCCHHHHHHHHHHHHhc--C---CCEEEEEecCCC
Q 012511 173 SYVLGEVPSLQDRITIVRQLWDL--T---RDVLVLVEPGTP 208 (462)
Q Consensus 173 s~vL~el~~~~~r~~~i~~Lw~~--~---gG~LVlVEpGtp 208 (462)
+++||++++ .+...+++++.+. + ||.|+|+|...+
T Consensus 258 ~~vlh~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 258 KWVLHDWND-EQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp ESCGGGSCH-HHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred cccccCCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 999999974 4444455555442 7 999999997543
No 186
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.56 E-value=6.5e-07 Score=82.43 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=65.9
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
..+.+|||+|||+|..+..++.. + ..+++++|.|+.|++.|+..+.... ++.++.. +... + ..+||+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-----d~~~-~---~~~~D~ 115 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G--AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIG-----DVSE-F---NSRVDI 115 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T--CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEES-----CGGG-C---CCCCSE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEEC-----chHH-c---CCCCCE
Confidence 35679999999999998888764 2 3479999999999999998876432 2222221 1221 2 248999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVL 202 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVl 202 (462)
|+++..++.... .....+++.+.+..|+.+++
T Consensus 116 v~~~~p~~~~~~-~~~~~~l~~~~~~l~~~~~~ 147 (207)
T 1wy7_A 116 VIMNPPFGSQRK-HADRPFLLKAFEISDVVYSI 147 (207)
T ss_dssp EEECCCCSSSST-TTTHHHHHHHHHHCSEEEEE
T ss_pred EEEcCCCccccC-CchHHHHHHHHHhcCcEEEE
Confidence 999988777642 22234566666655444433
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.55 E-value=9.2e-08 Score=95.61 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=64.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-------------CCCCceecchhHhhhhh
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-------------KDLPLIHSYNSIQALNK 158 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-------------~~~~~i~~~~~~~~l~~ 158 (462)
.+.+|||+|||+|..+.+++...+ ...+|+++|.|+.|++.|++.+... .++.++.. ++..
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~-----d~~~ 178 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVG-SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK-----DISG 178 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES-----CTTC
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC-----ChHH
Confidence 457999999999999998887653 2368999999999999999877531 12222211 2221
Q ss_pred cc-CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 159 DI-SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 159 ~l-~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
.. +...++||+|++... ++...+..+.++++ +||.|++..+.
T Consensus 179 ~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~Lk-pgG~lv~~~~~ 221 (336)
T 2b25_A 179 ATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLK-HGGVCAVYVVN 221 (336)
T ss_dssp CC-------EEEEEECSS-----STTTTHHHHGGGEE-EEEEEEEEESS
T ss_pred cccccCCCCeeEEEECCC-----CHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 11 123457999998532 22222334444444 79999998873
No 188
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.55 E-value=9.3e-07 Score=88.00 Aligned_cols=109 Identities=12% Similarity=0.180 Sum_probs=70.9
Q ss_pred CCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccC-CCCC
Q 012511 89 PGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDIS-KSER 165 (462)
Q Consensus 89 p~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~-~~~~ 165 (462)
|..++.+|||+|||+|..+..+++.++. .++++||+++.|++.|++.+.... ++.++.. +....+. ...+
T Consensus 86 p~p~~~rVLdIG~G~G~la~~la~~~p~--~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-----Da~~~l~~~~~~ 158 (317)
T 3gjy_A 86 QDASKLRITHLGGGACTMARYFADVYPQ--SRNTVVELDAELARLSREWFDIPRAPRVKIRVD-----DARMVAESFTPA 158 (317)
T ss_dssp SCGGGCEEEEESCGGGHHHHHHHHHSTT--CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-----CHHHHHHTCCTT
T ss_pred CCCCCCEEEEEECCcCHHHHHHHHHCCC--cEEEEEECCHHHHHHHHHhccccCCCceEEEEC-----cHHHHHhhccCC
Confidence 4333569999999999999999987773 389999999999999999875421 2222221 1111111 2346
Q ss_pred cccEEEecccccCCCC----HHHHHHHHHHHHhcCCCEEEEEec
Q 012511 166 EHDLVIASYVLGEVPS----LQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 166 ~fDLVias~vL~el~~----~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
+||+||+....+.-.. ..+....+.++++ +||.|++--.
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~Lk-pgGvlv~~~~ 201 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLA-PGGLYVANCG 201 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEEec
Confidence 8999998643332111 1344555666665 6999887654
No 189
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.55 E-value=5.8e-07 Score=84.92 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=68.3
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
..+.+|||+|||+|..+..++.. ..+++++|.|+.|++.|++.+.... ++.++. .++.... .....|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~-~~~~~~ 159 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV----AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN-----VDFKDAE-VPEGIF 159 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC-----SCTTTSC-CCTTCB
T ss_pred CCCCEEEEeCCCccHHHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE-----cChhhcc-cCCCcc
Confidence 34579999999999988888775 3589999999999999998875432 121211 1122111 134579
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|+|++. .++....+..+.++++ +||.++++.+.
T Consensus 160 D~v~~~-----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 192 (248)
T 2yvl_A 160 HAAFVD-----VREPWHYLEKVHKSLM-EGAPVGFLLPT 192 (248)
T ss_dssp SEEEEC-----SSCGGGGHHHHHHHBC-TTCEEEEEESS
T ss_pred cEEEEC-----CcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 999973 3344444555556665 79999998875
No 190
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.55 E-value=2.1e-07 Score=91.80 Aligned_cols=121 Identities=16% Similarity=0.148 Sum_probs=70.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC----C--CCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG----P--KDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~----~--~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.+.. . .++.++.. +....++...+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~-----D~~~~l~~~~~ 162 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS--VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIA-----NGAEYVRKFKN 162 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT--CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-----CHHHHGGGCSS
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-----cHHHHHhhCCC
Confidence 468999999999999988887543 46899999999999999987632 1 12222222 11111222346
Q ss_pred cccEEEecccccCCCC-----HHHHHHHHHHHHhcCCCEEEEEecCCCC-chHHHHHHHHHH
Q 012511 166 EHDLVIASYVLGEVPS-----LQDRITIVRQLWDLTRDVLVLVEPGTPQ-GSSIISQMRSHI 221 (462)
Q Consensus 166 ~fDLVias~vL~el~~-----~~~r~~~i~~Lw~~~gG~LVlVEpGtp~-Gf~~I~~aR~~l 221 (462)
+||+|++...-..+.. ..+....+.++++ +||.|++. -++|. .-+.+..+.+.+
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~-~~~~~~~~~~~~~~~~~l 222 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALK-EDGVFSAE-TEDPFYDIGWFKLAYRRI 222 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEE-EEEEEEEE-CCCTTTTHHHHHHHHHHH
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcC-CCcEEEEE-ccCcccCHHHHHHHHHHH
Confidence 8999998533211210 1233444555554 68988874 34442 223344444443
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.54 E-value=2.1e-07 Score=88.76 Aligned_cols=105 Identities=9% Similarity=0.097 Sum_probs=65.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC----------CCCCCceecchhHhhhhhccC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG----------PKDLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~----------~~~~~~i~~~~~~~~l~~~l~ 161 (462)
.+.+|||+|||+|..+..++...+ ...|++||+|+.|++.|++.+.. ..++.++... ....++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D-----~~~~l~ 121 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP--EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGN-----AMKFLP 121 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST--TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECC-----TTSCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC--CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEecc-----HHHHHH
Confidence 346999999999999998888765 35899999999999999876542 2233222221 111122
Q ss_pred --CCCCcccEEEecccccCCCCH--------HHHHHHHHHHHhcCCCEEEEEe
Q 012511 162 --KSEREHDLVIASYVLGEVPSL--------QDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 162 --~~~~~fDLVias~vL~el~~~--------~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
...+.+|.|++.+.--+.... ...+..+.++++ +||.|+++-
T Consensus 122 ~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lk-pgG~l~~~t 173 (246)
T 2vdv_E 122 NFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLK-EGGVVYTIT 173 (246)
T ss_dssp GTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcC-CCCEEEEEe
Confidence 345688988855321111000 233444555554 699999854
No 192
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.54 E-value=2.9e-07 Score=89.82 Aligned_cols=108 Identities=16% Similarity=0.212 Sum_probs=68.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC----C--CCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG----P--KDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~----~--~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..+....+ ..++++||+++.|++.|++.+.. . .++.++.. +....++...+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~-----D~~~~l~~~~~ 147 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS--VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-----DGFMHIAKSEN 147 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT--CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-----CSHHHHHTCCS
T ss_pred CCCEEEEECCchHHHHHHHHhCCC--CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-----cHHHHHhhCCC
Confidence 478999999999999888876433 46899999999999999987632 1 12222221 11111222346
Q ss_pred cccEEEecccccCCCC----HHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 166 EHDLVIASYVLGEVPS----LQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 166 ~fDLVias~vL~el~~----~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
+||+|++.......+. ..+....+.++++ +||.|++- .++|
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~-pgG~lv~~-~~~~ 192 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALK-EDGIFVAQ-TDNP 192 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEE-EEEEEEEE-CCCT
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEE-cCCc
Confidence 8999998644322111 1344555556665 68888774 3443
No 193
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.53 E-value=2.1e-07 Score=88.50 Aligned_cols=115 Identities=14% Similarity=0.149 Sum_probs=70.8
Q ss_pred HHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhh
Q 012511 79 RVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQA 155 (462)
Q Consensus 79 ~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~ 155 (462)
++|..+.... ++.+|||+|||+|..+..++..++. ..+++++|.|+.|++.|++.++..+. +.++... ....
T Consensus 60 ~~l~~l~~~~---~~~~VLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd-a~~~ 134 (237)
T 3c3y_A 60 QLMSFVLKLV---NAKKTIEVGVFTGYSLLLTALSIPD-DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD-AMLA 134 (237)
T ss_dssp HHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC-HHHH
T ss_pred HHHHHHHHhh---CCCEEEEeCCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC-HHHH
Confidence 4455544432 4689999999999988888887763 46999999999999999998764321 2222211 1111
Q ss_pred hhhccC-C--CCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 156 LNKDIS-K--SEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 156 l~~~l~-~--~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+. .+. . ..++||+|++..... ......+.+.++++ +||.||+-
T Consensus 135 l~-~l~~~~~~~~~fD~I~~d~~~~---~~~~~l~~~~~~L~-pGG~lv~d 180 (237)
T 3c3y_A 135 LD-NLLQGQESEGSYDFGFVDADKP---NYIKYHERLMKLVK-VGGIVAYD 180 (237)
T ss_dssp HH-HHHHSTTCTTCEEEEEECSCGG---GHHHHHHHHHHHEE-EEEEEEEE
T ss_pred HH-HHHhccCCCCCcCEEEECCchH---HHHHHHHHHHHhcC-CCeEEEEe
Confidence 11 111 0 146899999864321 12233344445554 68888764
No 194
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.53 E-value=1.1e-07 Score=94.71 Aligned_cols=104 Identities=17% Similarity=0.237 Sum_probs=67.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC-------CCCCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG-------PKDLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~-------~~~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
.+.+|||+|||+|..+..+++..+ ..++++||+|+.|++.|++.+.. ..++.++.. +....++...
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~--~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~-----D~~~~l~~~~ 149 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPT--VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-----DARAYLERTE 149 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTT--CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-----CHHHHHHHCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc-----hHHHHHHhcC
Confidence 468999999999999988877443 46899999999999999987642 112222221 1111122235
Q ss_pred CcccEEEecccccC---CCC----HHHHHHHHHHHHhcCCCEEEEE
Q 012511 165 REHDLVIASYVLGE---VPS----LQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 165 ~~fDLVias~vL~e---l~~----~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
++||+|++....+. -+. ..+....+.++++ +||.|++.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~ 194 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLN-PGGVMGMQ 194 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEE-EEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcC-CCcEEEEE
Confidence 68999999866544 110 1233444555554 69998885
No 195
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.53 E-value=1.3e-07 Score=96.47 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=63.9
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCCCcc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
++.++|||||||+|.++..+++. ...+|++||.|+ |++.|+++++..+. +.+++.. +. .+. .+.++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a---GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~-----~~-~~~-lpe~~ 150 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA---GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGP-----VE-TVE-LPEQV 150 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT---TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESC-----TT-TCC-CSSCE
T ss_pred cCCCEEEEeCCCccHHHHHHHHh---CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeee-----ee-eec-CCccc
Confidence 45689999999999887766653 246899999995 88999988764331 2223221 11 122 23689
Q ss_pred cEEEe---cccccCCCCHHHHHHHHHHHHhcCCCEEE
Q 012511 168 DLVIA---SYVLGEVPSLQDRITIVRQLWDLTRDVLV 201 (462)
Q Consensus 168 DLVia---s~vL~el~~~~~r~~~i~~Lw~~~gG~LV 201 (462)
|+||+ .+.|.+-......+....++++ |||.+|
T Consensus 151 DvivsE~~~~~l~~e~~l~~~l~a~~r~Lk-p~G~~i 186 (376)
T 4hc4_A 151 DAIVSEWMGYGLLHESMLSSVLHARTKWLK-EGGLLL 186 (376)
T ss_dssp EEEECCCCBTTBTTTCSHHHHHHHHHHHEE-EEEEEE
T ss_pred cEEEeecccccccccchhhhHHHHHHhhCC-CCceEC
Confidence 99998 4444443335555666677776 566543
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.51 E-value=2.3e-07 Score=87.91 Aligned_cols=106 Identities=11% Similarity=0.112 Sum_probs=68.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhc----------
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKD---------- 159 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~---------- 159 (462)
+.+|||+|||+|..+..++..++. ..+|+++|.|+.+++.|++.+...+. +.++.... ...+...
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~-~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPE-DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA-LETLQVLIDSKSAPSWA 138 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH-HHHHHHHHHCSSCCGGG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH-HHHHHHHHhhccccccc
Confidence 579999999999999888887752 46899999999999999998754321 22222110 0111100
Q ss_pred cCCC-C-CcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 160 ISKS-E-REHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 160 l~~~-~-~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
..+. . ++||+|++......+ ...+..+.++++ +||.||+.+
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~~~---~~~l~~~~~~L~-pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKENY---PNYYPLILKLLK-PGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGGGH---HHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHHHH---HHHHHHHHHHcC-CCeEEEEEc
Confidence 0011 1 689999988654332 233444455554 699999865
No 197
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.50 E-value=5.9e-07 Score=88.02 Aligned_cols=103 Identities=15% Similarity=0.245 Sum_probs=66.4
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccCCCCCcc--
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDISKSEREH-- 167 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~f-- 167 (462)
+.+|||+|||+|..+.+++.. + ..+|+++|+|+.|++.|++++.... + +.++.. ++...+ .++|
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~--~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~-----D~~~~~---~~~f~~ 192 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-S--DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG-----EFLEPF---KEKFAS 192 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-S--SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES-----STTGGG---GGGTTT
T ss_pred CCEEEEEeCchhHHHHHHHHC-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-----cchhhc---ccccCC
Confidence 469999999999999988876 4 4689999999999999999876432 1 222222 122112 1468
Q ss_pred -cEEEec------------ccccCCCCH-----HHHHHHHHHHH-hc--CCCEEEEEecCCC
Q 012511 168 -DLVIAS------------YVLGEVPSL-----QDRITIVRQLW-DL--TRDVLVLVEPGTP 208 (462)
Q Consensus 168 -DLVias------------~vL~el~~~-----~~r~~~i~~Lw-~~--~gG~LVlVEpGtp 208 (462)
|+|+++ .++ +-+.. .+-+.+++.+. +. +||.|++ |.|..
T Consensus 193 ~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~-e~~~~ 252 (284)
T 1nv8_A 193 IEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM-EIGED 252 (284)
T ss_dssp CCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE-ECCTT
T ss_pred CCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE-EECch
Confidence 999997 222 22110 01124556665 43 7898886 76654
No 198
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.49 E-value=2.4e-07 Score=86.72 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=67.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCC--CCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKS--ERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~--~~~ 166 (462)
++.+|||+|||+|..+..++..++. ..+|+++|.|+.|++.|++.++..+ ++.++.... ...+. .++.. .++
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~-~~~~~-~~~~~~~~~~ 145 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPA-DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA-LETLD-ELLAAGEAGT 145 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH-HHHHH-HHHHTTCTTC
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH-HHHHH-HHHhcCCCCC
Confidence 4579999999999999888886652 4699999999999999998875432 222222211 11111 11111 168
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
||+|++... .......+..+.++++ +||.||+-+
T Consensus 146 ~D~v~~d~~---~~~~~~~l~~~~~~L~-pgG~lv~~~ 179 (229)
T 2avd_A 146 FDVAVVDAD---KENCSAYYERCLQLLR-PGGILAVLR 179 (229)
T ss_dssp EEEEEECSC---STTHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccEEEECCC---HHHHHHHHHHHHHHcC-CCeEEEEEC
Confidence 999998654 2222333444445554 689988854
No 199
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.48 E-value=4.7e-07 Score=82.87 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=30.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCH
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQ 128 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~ 128 (462)
..+|||+|||+|..+..+++.++....+|+++|.|+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 469999999999999988887652136899999998
No 200
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.48 E-value=6.6e-08 Score=90.01 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=62.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC------CCCCCceecchhHhhhhhccCCCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG------PKDLPLIHSYNSIQALNKDISKSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~------~~~~~~i~~~~~~~~l~~~l~~~~~ 165 (462)
.+.+|||+|||+|..+..++..++ ..+|++||+|+.|++.+.+.++. ..++.++.. ++. .++....
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p--~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~-----d~~-~l~~~~~ 98 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNP--SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWA-----TAE-RLPPLSG 98 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCT--TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEEC-----CST-TCCSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEec-----chh-hCCCCCC
Confidence 357999999999999998888764 46899999999999853322221 112222221 222 2333333
Q ss_pred cccEEEec---cccc--CCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 166 EHDLVIAS---YVLG--EVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 166 ~fDLVias---~vL~--el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
. |.|++. ..++ ++++....+..+.++++ +||.|++.
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~ 139 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCR-PGASFLVA 139 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEE-EEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcC-CCcEEEEE
Confidence 4 655532 2332 55555555555666665 69999883
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.48 E-value=4.8e-07 Score=85.62 Aligned_cols=106 Identities=14% Similarity=0.176 Sum_probs=66.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCC--Cc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSE--RE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~--~~ 166 (462)
.+.+|||+|||+|..+..++..++. ..+|+++|.|+.+++.|++.+...+ .+.++... ....+. .++... ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d-~~~~l~-~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP-ALATLE-QLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC-HHHHHH-HHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC-HHHHHH-HHHhcCCCCC
Confidence 3579999999999999888887652 4689999999999999998875322 12222211 011111 122222 68
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
||+|++..... +....+..+.++++ +||.||+-+
T Consensus 149 fD~V~~d~~~~---~~~~~l~~~~~~Lk-pgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKR---NYPRYYEIGLNLLR-RGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGG---GHHHHHHHHHHTEE-EEEEEEEEC
T ss_pred cCEEEECCCHH---HHHHHHHHHHHHcC-CCeEEEEeC
Confidence 99999875421 12232333334443 689888754
No 202
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.48 E-value=1.3e-06 Score=79.50 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=59.1
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCC-------ccEEEEEeCCHHHHHHHHHhhcCCCCCCce-ecchh----Hhhhhhcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRS-------LEKVNLVEPSQSMQRAGQSLMQGPKDLPLI-HSYNS----IQALNKDI 160 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~-------~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i-~~~~~----~~~l~~~l 160 (462)
+.+|||+|||+|..+..++..++.. ..+++++|+|+.+ ...+...+ ..... ...+...
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~- 92 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRILEV- 92 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHHHH-
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHHHh-
Confidence 4799999999999999988877521 1589999999842 01112222 11100 0001111
Q ss_pred CCCCCcccEEEecccccCCCC----HHHH----HHHHHHHHhc--CCCEEEEEecCC
Q 012511 161 SKSEREHDLVIASYVLGEVPS----LQDR----ITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~----~~~r----~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
....+||+|++..+++.... .... ..++..+.+. +||.|++.....
T Consensus 93 -~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 93 -LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp -SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 12357999999765543221 1110 1334333332 799999887644
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.47 E-value=4.2e-07 Score=91.27 Aligned_cols=104 Identities=16% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC------CCCCceecchhHhhhhhccC-CCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP------KDLPLIHSYNSIQALNKDIS-KSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~------~~~~~i~~~~~~~~l~~~l~-~~~ 164 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+|+.|++.|++.+... .++.++.. +....++ ...
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~--~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-----D~~~~l~~~~~ 192 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHAS--IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-----DGVAFLKNAAE 192 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTT--CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-----CHHHHHHTSCT
T ss_pred CCCEEEEECCCccHHHHHHHHcCC--CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-----CHHHHHHhccC
Confidence 468999999999999988887433 468999999999999999876421 12222222 1111111 124
Q ss_pred CcccEEEecccccCCC-C---HHHHHHHHHHHHhcCCCEEEEE
Q 012511 165 REHDLVIASYVLGEVP-S---LQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 165 ~~fDLVias~vL~el~-~---~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
++||+|++......-+ . ..+....+.++++ +||.|++-
T Consensus 193 ~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~ 234 (334)
T 1xj5_A 193 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALR-PGGVVCTQ 234 (334)
T ss_dssp TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCccEEEECCCCccCcchhhhHHHHHHHHHHhcC-CCcEEEEe
Confidence 6899999864321111 1 1233445555554 68988875
No 204
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.46 E-value=1e-06 Score=88.80 Aligned_cols=107 Identities=12% Similarity=0.060 Sum_probs=68.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|+.+..++...+ ...+++++|+|+.|++.|+..++..+ ++.++.. +... ++.....||+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~-~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~-----D~~~-~~~~~~~~D~ 275 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLG-PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA-----DARH-LPRFFPEVDR 275 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHC-TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC-----CGGG-GGGTCCCCSE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhC-CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC-----Chhh-CccccCCCCE
Confidence 346999999999999988887652 13579999999999999999886543 2333322 1221 2223456899
Q ss_pred EEecccccCCCCH-HHH----HHHHHHHHhc--CCCEEEEEec
Q 012511 170 VIASYVLGEVPSL-QDR----ITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 170 Vias~vL~el~~~-~~r----~~~i~~Lw~~--~gG~LVlVEp 205 (462)
||++-..++.... ... ..+++.+.+. +||.++++.+
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9996544432211 111 2344444443 7999999866
No 205
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.45 E-value=2.6e-07 Score=90.09 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=66.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
+.+|||+|||+|..+..++.... .+|+++|.|+.|++.|++.++..+ + +.++.. +... +.. ..+||+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~---~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~-----D~~~-~~~-~~~fD~ 195 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGK---AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM-----DNRD-FPG-ENIADR 195 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC---CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-----CTTT-CCC-CSCEEE
T ss_pred CCEEEEecccCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC-----CHHH-hcc-cCCccE
Confidence 57999999999998888777532 279999999999999998875322 1 112211 2221 222 568999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpG 206 (462)
|++... .+....+..+.++++ +||.|++.+..
T Consensus 196 Vi~~~p----~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 227 (278)
T 2frn_A 196 ILMGYV----VRTHEFIPKALSIAK-DGAIIHYHNTV 227 (278)
T ss_dssp EEECCC----SSGGGGHHHHHHHEE-EEEEEEEEEEE
T ss_pred EEECCc----hhHHHHHHHHHHHCC-CCeEEEEEEee
Confidence 998644 222333344445554 69999998875
No 206
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.44 E-value=3.5e-07 Score=87.38 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.|.+|||+|||+|.+++++. + ...|+++|+++.|++.++..+.... .+... ...++.. .....+||+|+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~--~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~---~v~D~~~--~~~~~~~DvvL 173 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---G--IASVWGCDIHQGLGDVITPFAREKD-WDFTF---ALQDVLC--APPAEAGDLAL 173 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---T--CSEEEEEESBHHHHHHHHHHHHHTT-CEEEE---EECCTTT--SCCCCBCSEEE
T ss_pred CCCeEEEecCCccHHHHHhc---c--CCeEEEEeCCHHHHHHHHHHHHhcC-CCceE---EEeeccc--CCCCCCcchHH
Confidence 57899999999999888766 3 5799999999999999999875432 22111 1122221 12345899999
Q ss_pred ecccccCCCCHH--HHHHHHHHHHhcCCCEEEEEe
Q 012511 172 ASYVLGEVPSLQ--DRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 172 as~vL~el~~~~--~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+.-++++|.+.. ....+++.| .+++++|-+.
T Consensus 174 llk~lh~LE~q~~~~~~~ll~aL--~~~~vvVsfP 206 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAMALLQSL--NTPRMAVSFP 206 (253)
T ss_dssp EESCHHHHHHHSTTHHHHHHHHC--BCSEEEEEEE
T ss_pred HHHHHHHhhhhchhhHHHHHHHh--cCCCEEEEcC
Confidence 999999885322 122344432 2566666666
No 207
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.44 E-value=3e-07 Score=87.49 Aligned_cols=101 Identities=7% Similarity=0.011 Sum_probs=59.5
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhh-hccCCCCCcccE
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALN-KDISKSEREHDL 169 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~-~~l~~~~~~fDL 169 (462)
..+.+|||+|||+|..+..+++. + ..+|++||+|+.|++.|+............ ....+. ..++ ...||.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g--~~~V~gvDis~~ml~~a~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~d~ 106 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-G--AKLVYALDVGTNQLAWKIRSDERVVVMEQF----NFRNAVLADFE--QGRPSF 106 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T--CSEEEEECSSCCCCCHHHHTCTTEEEECSC----CGGGCCGGGCC--SCCCSE
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-C--CCEEEEEcCCHHHHHHHHHhCccccccccc----eEEEeCHhHcC--cCCCCE
Confidence 34579999999999998887774 2 248999999999999877643221000000 000111 1111 112455
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+.+..++..+ ...+..+.++++ |||.|+++-
T Consensus 107 ~~~D~v~~~l---~~~l~~i~rvLk-pgG~lv~~~ 137 (232)
T 3opn_A 107 TSIDVSFISL---DLILPPLYEILE-KNGEVAALI 137 (232)
T ss_dssp EEECCSSSCG---GGTHHHHHHHSC-TTCEEEEEE
T ss_pred EEEEEEhhhH---HHHHHHHHHhcc-CCCEEEEEE
Confidence 5555444444 334455566665 799998863
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.43 E-value=4.3e-07 Score=88.78 Aligned_cols=120 Identities=17% Similarity=0.172 Sum_probs=70.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----------CCCceecchhHhhhhhccC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----------DLPLIHSYNSIQALNKDIS 161 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----------~~~~i~~~~~~~~l~~~l~ 161 (462)
.+.+|||+|||+|..+..++.. + ..++++||+|+.|++.|++.+ ... ..+.+... ..+....++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~--~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~--~~D~~~~l~ 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-D--VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLT--IGDGFEFIK 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-C--CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEE--ESCHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-C--CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEE--ECchHHHhc
Confidence 4689999999999998888775 4 468999999999999999887 321 11222110 011111111
Q ss_pred CCCCcccEEEecccccCCCC----HHHHHHHHHHHHhcCCCEEEEEecCCCC-chHHHHHHHHH
Q 012511 162 KSEREHDLVIASYVLGEVPS----LQDRITIVRQLWDLTRDVLVLVEPGTPQ-GSSIISQMRSH 220 (462)
Q Consensus 162 ~~~~~fDLVias~vL~el~~----~~~r~~~i~~Lw~~~gG~LVlVEpGtp~-Gf~~I~~aR~~ 220 (462)
. .++||+|++......-+. ..+....+.++++ +||.|++-- +.+. .-+.+..+++.
T Consensus 149 ~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~-~~~~~~~~~~~~~~~~ 209 (281)
T 1mjf_A 149 N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALN-NPGIYVTQA-GSVYLFTDELISAYKE 209 (281)
T ss_dssp H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEE-EEEEEEEEE-EETTTSHHHHHHHHHH
T ss_pred c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEc-CCcccCHHHHHHHHHH
Confidence 2 468999998654321110 1233444455554 689888752 3332 23344444444
No 209
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.42 E-value=3.1e-07 Score=87.48 Aligned_cols=100 Identities=13% Similarity=0.157 Sum_probs=61.8
Q ss_pred CCeEEEECCchhHHHHHHHHh---CCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc--cCC-CCCc
Q 012511 93 PAKVLDFGAGTGSAFWALREV---WPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD--ISK-SERE 166 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~---~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~--l~~-~~~~ 166 (462)
+.+|||+|||+|..+..+++. .. ...+|++||+|+.|++.|+.+ . .++.++... .... ++. ...+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~-~~~~V~gvD~s~~~l~~a~~~-~--~~v~~~~gD-----~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMG-IDCQVIGIDRDLSRCQIPASD-M--ENITLHQGD-----CSDLTTFEHLREMA 152 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTT-CCCEEEEEESCCTTCCCCGGG-C--TTEEEEECC-----SSCSGGGGGGSSSC
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcC-CCCEEEEEeCChHHHHHHhcc-C--CceEEEECc-----chhHHHHHhhccCC
Confidence 579999999999888877775 22 246899999999999887732 1 223333221 1110 121 2237
Q ss_pred ccEEEecccccCCCCHHHHHHHHHH-HHhcCCCEEEEEec
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQ-LWDLTRDVLVLVEP 205 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~-Lw~~~gG~LVlVEp 205 (462)
||+|++... + . +....+..+.+ +++ +||.||+.+.
T Consensus 153 fD~I~~d~~-~-~-~~~~~l~~~~r~~Lk-pGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNA-H-A-NTFNIMKWAVDHLLE-EGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESS-C-S-SHHHHHHHHHHHTCC-TTCEEEECSC
T ss_pred CCEEEECCc-h-H-hHHHHHHHHHHhhCC-CCCEEEEEeC
Confidence 999997654 2 2 33333333332 443 7999998653
No 210
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.41 E-value=3.7e-07 Score=96.05 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=69.4
Q ss_pred HHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhh
Q 012511 82 CEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNK 158 (462)
Q Consensus 82 ~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~ 158 (462)
..+...+...++.+|||+|||+|..+..++. .+ ..+|++||.|+ |++.|++.+...+ ++.++.. ++..
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~-~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~-----d~~~ 218 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQ-AG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPG-----KVEE 218 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHH-TT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEES-----CTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHH-cC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEEC-----chhh
Confidence 3344444444568999999999998887776 33 45899999999 9999998775432 2222221 1221
Q ss_pred ccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEE
Q 012511 159 DISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVL 202 (462)
Q Consensus 159 ~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVl 202 (462)
++ ..++||+|++..++.++... .....+..+.+. +||.|++
T Consensus 219 -~~-~~~~fD~Ivs~~~~~~~~~e-~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 219 -VS-LPEQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp -CC-CSSCEEEEECCCCHHHHTCH-HHHHHHHHGGGGEEEEEEEES
T ss_pred -Cc-cCCCeEEEEEeCchHhcCcH-HHHHHHHHHHHhcCCCCEEEE
Confidence 12 23589999998777766533 333344333332 6888873
No 211
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.40 E-value=7.6e-07 Score=89.35 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=81.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCC---ccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRS---LEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~---~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|..+.++.+..+.. ...++|+|+++.|++.|+..+...+ +..++.. +... +....+|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~-----D~l~--~~~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQ-----DGLA--NLLVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES-----CTTS--CCCCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEEC-----CCCC--ccccCCc
Confidence 34799999999999998887765421 2689999999999999998754211 2222221 1111 1234689
Q ss_pred cEEEecccccCCCCHHH---------------HHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHHH
Q 012511 168 DLVIASYVLGEVPSLQD---------------RITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHILW 223 (462)
Q Consensus 168 DLVias~vL~el~~~~~---------------r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL~ 223 (462)
|+||++-.++.++..+. ...++..+.+. +||.++++-|..--+...-..+|+.|++
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~ 275 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKK 275 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHH
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHh
Confidence 99999977665543321 12355555553 7999999987553333334777888764
No 212
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.40 E-value=1.6e-07 Score=84.50 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=63.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCC---CCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISK---SEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~---~~~~fD 168 (462)
.+.+|||+|||. +++|.|+.|++.|++.+.. ++.++... +. .++. ..++||
T Consensus 12 ~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~~--~~~~~~~d-----~~-~~~~~~~~~~~fD 65 (176)
T 2ld4_A 12 AGQFVAVVWDKS------------------SPVEALKGLVDKLQALTGN--EGRVSVEN-----IK-QLLQSAHKESSFD 65 (176)
T ss_dssp TTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTTT--TSEEEEEE-----GG-GGGGGCCCSSCEE
T ss_pred CCCEEEEecCCc------------------eeeeCCHHHHHHHHHhccc--CcEEEEec-----hh-cCccccCCCCCEe
Confidence 457999999995 1399999999999987643 23333221 22 1222 467899
Q ss_pred EEEecccccCC-CCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 169 LVIASYVLGEV-PSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 169 LVias~vL~el-~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
+|+++++|+++ ++....+..+.++++ |||.|++.++
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~ 102 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILR-PGGCLFLKEP 102 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCC-CCEEEEEEcc
Confidence 99999999999 777766667777775 6999999766
No 213
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.39 E-value=1.5e-06 Score=82.29 Aligned_cols=112 Identities=12% Similarity=0.042 Sum_probs=72.4
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
+.+|||+|||+|..+.+++...+ ..+|+++|.|+.+++.|++.++..+- +.++.. +.-..++. ..+||+
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~--~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~-----d~l~~l~~-~~~~D~ 87 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQ--IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLA-----NGLAAFEE-TDQVSV 87 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTS--EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEEC-----SGGGGCCG-GGCCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC-----chhhhccc-CcCCCE
Confidence 46999999999999998887543 46899999999999999998865431 222221 22122321 126999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHHH
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHILW 223 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL~ 223 (462)
|+.+.+-. .-...++...++. ++|.||+ .|.+ | ...+|+++..
T Consensus 88 IviaG~Gg-----~~i~~Il~~~~~~L~~~~~lVl-q~~~--~---~~~vr~~L~~ 132 (225)
T 3kr9_A 88 ITIAGMGG-----RLIARILEEGLGKLANVERLIL-QPNN--R---EDDLRIWLQD 132 (225)
T ss_dssp EEEEEECH-----HHHHHHHHHTGGGCTTCCEEEE-EESS--C---HHHHHHHHHH
T ss_pred EEEcCCCh-----HHHHHHHHHHHHHhCCCCEEEE-ECCC--C---HHHHHHHHHH
Confidence 98776532 2233455555543 5777776 5553 4 4556888653
No 214
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.39 E-value=1.1e-07 Score=91.60 Aligned_cols=106 Identities=10% Similarity=0.069 Sum_probs=72.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.|.+|||+|||.|.++.++....+ ..+|+++|+++.|+++++..+...+ +... ..+.++.. .....+||+|+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p--~a~y~a~DId~~~le~a~~~l~~~g-~~~~---~~v~D~~~--~~p~~~~DvaL 203 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPA--ETVYIASDIDARLVGFVDEALTRLN-VPHR---TNVADLLE--DRLDEPADVTL 203 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCT--TCEEEEEESBHHHHHHHHHHHHHTT-CCEE---EEECCTTT--SCCCSCCSEEE
T ss_pred CCceeeeeccCccHHHHHHHhhCC--CCEEEEEeCCHHHHHHHHHHHHhcC-CCce---EEEeeecc--cCCCCCcchHH
Confidence 478999999999988877665433 5799999999999999999886533 2211 11122321 23467899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHh--cCCCEEEEEecCC
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWD--LTRDVLVLVEPGT 207 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~--~~gG~LVlVEpGt 207 (462)
+.-++++|. .+++-..+ +++. .++|.+|-.+--+
T Consensus 204 ~lkti~~Le-~q~kg~g~-~ll~aL~~~~vvVSfp~ks 239 (281)
T 3lcv_B 204 LLKTLPCLE-TQQRGSGW-EVIDIVNSPNIVVTFPTKS 239 (281)
T ss_dssp ETTCHHHHH-HHSTTHHH-HHHHHSSCSEEEEEEECC-
T ss_pred HHHHHHHhh-hhhhHHHH-HHHHHhCCCCEEEeccchh
Confidence 999999996 33222222 3333 2678888877633
No 215
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.36 E-value=1.3e-06 Score=86.86 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=67.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..+++.++. ..+|+++|+|+.|++.+++.++..+ ++.++.. +... ++....+||+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~-~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~-----D~~~-~~~~~~~fD~ 190 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRN-DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS-----SSLH-IGELNVEFDK 190 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS-----CGGG-GGGGCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEEC-----Chhh-cccccccCCE
Confidence 4579999999999999988887652 4689999999999999998875422 2222221 1111 1112457999
Q ss_pred EEec------ccccCCCC------HH-------HHHHHHHHHHhc--CCCEEEEEec
Q 012511 170 VIAS------YVLGEVPS------LQ-------DRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 170 Vias------~vL~el~~------~~-------~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
|++. .++...++ .. ....++.++++. +||.||+..-
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9983 22332221 11 113455555553 7999998654
No 216
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.36 E-value=6.9e-07 Score=87.29 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=65.4
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQAL 156 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l 156 (462)
|.++..+....+..+|||+|||||..+..+++. .+|++||.|+ |+..+++...... ++.++. ...++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~---~~~D~ 141 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFK---SKVDV 141 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEE---CSCCG
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEe---ccCcH
Confidence 444444421223469999999999998887763 4799999998 6433221100000 111110 01122
Q ss_pred hhccCCCCCcccEEEecccccCCCCHH-------HHHHHHHHHHhcCCC--EEEEEecCCCCch
Q 012511 157 NKDISKSEREHDLVIASYVLGEVPSLQ-------DRITIVRQLWDLTRD--VLVLVEPGTPQGS 211 (462)
Q Consensus 157 ~~~l~~~~~~fDLVias~vL~el~~~~-------~r~~~i~~Lw~~~gG--~LVlVEpGtp~Gf 211 (462)
. .++ ..+||+|++..+ +...... ..+..+.++++ ||| .||+-... |...
T Consensus 142 ~-~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~~v~~~~~-~~~~ 199 (276)
T 2wa2_A 142 T-KME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLE-YNQGCGFCVKVLN-PYSC 199 (276)
T ss_dssp G-GCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HSTTCEEEEEESC-CCSH
T ss_pred h-hCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeCC-CCch
Confidence 2 132 568999999877 5443321 12344555565 699 88886655 5443
No 217
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.35 E-value=6.4e-07 Score=87.03 Aligned_cols=105 Identities=12% Similarity=0.178 Sum_probs=60.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
...+|||+|||||..+..+++. .+|++||.|+ |+..++....... ++.++.. ..++. .+ +..+|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~---~~D~~-~l--~~~~f 141 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKS---RVDIH-TL--PVERT 141 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEEC---SCCTT-TS--CCCCC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEec---ccCHh-HC--CCCCC
Confidence 3469999999999988887763 5799999998 6322211100000 1111100 11221 12 25689
Q ss_pred cEEEecccccCCCCHH---H----HHHHHHHHHhcCCC--EEEEEecCCCCch
Q 012511 168 DLVIASYVLGEVPSLQ---D----RITIVRQLWDLTRD--VLVLVEPGTPQGS 211 (462)
Q Consensus 168 DLVias~vL~el~~~~---~----r~~~i~~Lw~~~gG--~LVlVEpGtp~Gf 211 (462)
|+|++..+ +...... . .+..+.++++ ||| .||+-... |...
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~fv~kv~~-~~~~ 191 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKV-KNPSADFVVKVLC-PYSV 191 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCEEEEEESC-TTSH
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhc-cCCCeEEEEEeCC-CCCh
Confidence 99999877 5443321 1 2344555665 699 88886655 5554
No 218
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.34 E-value=2.4e-07 Score=87.61 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=33.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCC-HHHHHHH
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPS-QSMQRAG 134 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S-~~ml~~A 134 (462)
.+.+|||+|||+|..+..++...+ ..+|++||+| +.|++.|
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~--~~~v~GvD~s~~~ml~~A 65 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQ--NTFYIGIDPVKENLFDIS 65 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCT--TEEEEEECSCCGGGHHHH
T ss_pred CCCEEEEEeccCcHHHHHHHHhCC--CCEEEEEeCCHHHHHHHH
Confidence 347999999999999888876443 4689999999 8888776
No 219
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.33 E-value=2.4e-06 Score=81.94 Aligned_cols=115 Identities=13% Similarity=-0.010 Sum_probs=71.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+.+++...+ ..+|+++|.|+.+++.|++.++..+-...+... ..+....+. ...+||+||+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~--~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~--~gD~l~~~~-~~~~~D~Ivi 96 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQT--ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVR--KGNGLAVIE-KKDAIDTIVI 96 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTS--EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEE--ECSGGGGCC-GGGCCCEEEE
T ss_pred CCEEEEECCccHHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE--ecchhhccC-ccccccEEEE
Confidence 46999999999999998887543 458999999999999999988653311111110 112222221 2235999987
Q ss_pred cccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHHH
Q 012511 173 SYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHILW 223 (462)
Q Consensus 173 s~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL~ 223 (462)
+.+..++ ...++...... +++.||+ -|- .| ...+|++|.+
T Consensus 97 agmGg~l-----I~~IL~~~~~~L~~~~~lIl-q~~--~~---~~~lr~~L~~ 138 (244)
T 3gnl_A 97 AGMGGTL-----IRTILEEGAAKLAGVTKLIL-QPN--IA---AWQLREWSEQ 138 (244)
T ss_dssp EEECHHH-----HHHHHHHTGGGGTTCCEEEE-EES--SC---HHHHHHHHHH
T ss_pred eCCchHH-----HHHHHHHHHHHhCCCCEEEE-EcC--CC---hHHHHHHHHH
Confidence 7654432 23344444433 4667666 332 24 4566888764
No 220
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.32 E-value=3.1e-06 Score=80.46 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=72.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC---CCceecchhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD---LPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
+.+|||+|||+|..+.+++...+ ..+|+++|.|+.+++.|++.++..+- +.++.. +....+. ...+||+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~--~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~g-----D~l~~~~-~~~~~D~ 93 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGY--CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLA-----NGLSAFE-EADNIDT 93 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTC--EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEEC-----SGGGGCC-GGGCCCE
T ss_pred CCEEEEECCchHHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-----chhhccc-cccccCE
Confidence 46999999999999998887532 46899999999999999998865431 222221 2222221 2237999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHHH
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHILW 223 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL~ 223 (462)
|+.+.+..++ ...++...+.. ++|.||+ -|- .+ ...+|+++..
T Consensus 94 IviaGmGg~l-----I~~IL~~~~~~l~~~~~lIl-qp~--~~---~~~lr~~L~~ 138 (230)
T 3lec_A 94 ITICGMGGRL-----IADILNNDIDKLQHVKTLVL-QPN--NR---EDDLRKWLAA 138 (230)
T ss_dssp EEEEEECHHH-----HHHHHHHTGGGGTTCCEEEE-EES--SC---HHHHHHHHHH
T ss_pred EEEeCCchHH-----HHHHHHHHHHHhCcCCEEEE-ECC--CC---hHHHHHHHHH
Confidence 9877665433 23344444443 5677766 332 23 4566888764
No 221
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.31 E-value=1.8e-06 Score=83.92 Aligned_cols=111 Identities=17% Similarity=0.097 Sum_probs=67.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..+++.++. ..+|+++|.|+.|++.+++.++..+ ++.++... ...+...+.....+||+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~-~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D--~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKN-KGTIVAVEISKTRTKALKSNINRMGVLNTIIINAD--MRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC--HHHHHHHHHHTTCCEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCC-CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCC--hHhcchhhhhccccCCE
Confidence 3579999999999999888887652 4689999999999999998876432 22222221 11111100002458999
Q ss_pred EEeccccc---CCC-----CH-------HHHHHHHHHHHhc--CCCEEEEEec
Q 012511 170 VIASYVLG---EVP-----SL-------QDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 170 Vias~vL~---el~-----~~-------~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
|++.--.. .+. +. .....++..+++. +||.||+...
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 99862211 110 00 1113345554443 7999998764
No 222
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.30 E-value=1.1e-06 Score=85.16 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=61.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.|.+|||+|||+|..+..+... + .++++||+++.|++.|++.+.... ..+.+... ..+.. ... ++||
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~--~~D~~---~~~-~~fD 141 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA--KQLLD---LDI-KKYD 141 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEE--SSGGG---SCC-CCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEE--echHH---HHH-hhCC
Confidence 4689999999999988877764 3 689999999999999987654310 01111110 11111 112 6899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
+||+. .+++......+.++++ +||.|++-
T Consensus 142 ~Ii~d-----~~dp~~~~~~~~~~L~-pgG~lv~~ 170 (262)
T 2cmg_A 142 LIFCL-----QEPDIHRIDGLKRMLK-EDGVFISV 170 (262)
T ss_dssp EEEES-----SCCCHHHHHHHHTTEE-EEEEEEEE
T ss_pred EEEEC-----CCChHHHHHHHHHhcC-CCcEEEEE
Confidence 99986 2334433344444443 69999875
No 223
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.30 E-value=9.5e-07 Score=85.87 Aligned_cols=102 Identities=18% Similarity=0.098 Sum_probs=68.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|..+..++...+ ..+|+++|.|+.|++.|++.++..+ +..++.. +... .+. ..+||+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~-----d~~~-~~~-~~~~D~ 189 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILA-----DNRD-VEL-KDVADR 189 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEES-----CGGG-CCC-TTCEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEEC-----ChHH-cCc-cCCceE
Confidence 347999999999999888887654 3589999999999999998875432 2222221 2222 222 468999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
|++.... .....+..+.++++ +||.+++.+...
T Consensus 190 Vi~d~p~----~~~~~l~~~~~~Lk-pgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH----KTHKFLDKTFEFLK-DRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS----SGGGGHHHHHHHEE-EEEEEEEEEEEE
T ss_pred EEECCcc----cHHHHHHHHHHHcC-CCCEEEEEEcCc
Confidence 9988654 23333333334444 699998877643
No 224
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.29 E-value=8.1e-07 Score=89.09 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=64.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C--CCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D--LPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~--~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
++.+|||+|||+|..+..++.. ..+|++||.|+.|++.|++.+.... + +.++... ...+.........+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~----ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D--~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA----GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICED--AMKFIQREERRGSTY 226 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT----TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSC--HHHHHHHHHHHTCCB
T ss_pred CCCcEEEcccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc--HHHHHHHHHhcCCCc
Confidence 3579999999999998888762 2389999999999999998875321 1 2233221 111111010114589
Q ss_pred cEEEec---ccccCC---C-CHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 168 DLVIAS---YVLGEV---P-SLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias---~vL~el---~-~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
|+||+. +....- . .......++..+.+. +||.|++....+
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 999984 222210 0 012233445444433 799877655443
No 225
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.24 E-value=1.2e-06 Score=89.43 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=66.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|+.+..++.. ...+|++||.|+.|++.|++.++..+ ++.++... ...+...+.....+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~---ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D--~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG---GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMD--VFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT---TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESC--HHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECC--HHHHHHHHHHhCCCc
Confidence 3579999999999998888762 23589999999999999999875432 22233221 111111111123589
Q ss_pred cEEEecccc-----cCCCCHHH-HHHHHHHHHhc--CCCEEEEEecCC
Q 012511 168 DLVIASYVL-----GEVPSLQD-RITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias~vL-----~el~~~~~-r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
|+||+.--. ..+.+... ...++..+.+. +||.|++.....
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999984222 23333222 22333333332 789888766543
No 226
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.23 E-value=5.2e-06 Score=84.31 Aligned_cols=106 Identities=8% Similarity=0.003 Sum_probs=68.6
Q ss_pred CCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCC-CCCc
Q 012511 90 GFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISK-SERE 166 (462)
Q Consensus 90 ~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~-~~~~ 166 (462)
...+.+|||+| |+|..+.+++...+ ..+|+++|+|+.|++.|++.++..+ ++.++.. ++...++. ..++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~--~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~-----D~~~~l~~~~~~~ 241 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGL--PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTF-----DLRKPLPDYALHK 241 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECC-----CTTSCCCTTTSSC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEC-----hhhhhchhhccCC
Confidence 34568999999 99988888776533 2589999999999999999876422 2222222 23222332 2458
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 167 HDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 167 fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
||+|+++..++.. ....++.++.+. +||.+++++-.+
T Consensus 242 fD~Vi~~~p~~~~----~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 242 FDTFITDPPETLE----AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp BSEEEECCCSSHH----HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ccEEEECCCCchH----HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9999998654432 123455555443 789665555544
No 227
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.20 E-value=2.6e-06 Score=84.03 Aligned_cols=86 Identities=16% Similarity=0.169 Sum_probs=58.5
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhc
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKD 159 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~ 159 (462)
++..+...+......+|||+|||+|..+..+++. ..+|++||+++.|++.+++.+....++.++... .. .
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~----~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD-----~l-~ 107 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKN----AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGD-----AL-K 107 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH----SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESC-----TT-T
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHhccCCCeEEEECc-----hh-h
Confidence 3444444444334579999999999999888874 358999999999999999887643444443322 21 1
Q ss_pred cCCCCCcccEEEeccc
Q 012511 160 ISKSEREHDLVIASYV 175 (462)
Q Consensus 160 l~~~~~~fDLVias~v 175 (462)
++.....||.||++..
T Consensus 108 ~~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 108 VDLNKLDFNKVVANLP 123 (295)
T ss_dssp SCGGGSCCSEEEEECC
T ss_pred CCcccCCccEEEEeCc
Confidence 2223346999997643
No 228
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.19 E-value=7.6e-06 Score=83.87 Aligned_cols=110 Identities=13% Similarity=-0.029 Sum_probs=65.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC-CCceecchhHhhhhhccCCCCCcccEEE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD-LPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~-~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
+.+|||+|||+|..+.+++.. ..+|++||.|+.|++.|++.++..+- ..+... +....++...+.||+|+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~----ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~-----D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK----GAYALAVDKDLEALGVLDQAALRLGLRVDIRHG-----EALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEES-----CHHHHHHTCCCCEEEEE
T ss_pred CCeEEEcccchhHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEc-----cHHHHHHHhcCCCCEEE
Confidence 579999999999999888873 23499999999999999988753221 112211 11111111123499999
Q ss_pred ecccccCCC--CH----HHHHHHHHHHHhc--CCCEEEEEecCCCCch
Q 012511 172 ASYVLGEVP--SL----QDRITIVRQLWDL--TRDVLVLVEPGTPQGS 211 (462)
Q Consensus 172 as~vL~el~--~~----~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf 211 (462)
+.--...-. .. .....++..+.+. +||.|++.........
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~ 333 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRL 333 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCH
Confidence 853211100 00 1112344444443 7999998876554443
No 229
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.17 E-value=3.1e-06 Score=86.69 Aligned_cols=116 Identities=18% Similarity=0.115 Sum_probs=70.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
.+.+|||+|||+|..+.++++.++ ...+++|+|+++.|++.| .++.++.. ++.. . ....+||+||
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~-~~~~i~gvDi~~~~~~~a-------~~~~~~~~-----D~~~-~-~~~~~fD~Ii 103 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHG-TAYRFVGVEIDPKALDLP-------PWAEGILA-----DFLL-W-EPGEAFDLIL 103 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHC-SCSEEEEEESCTTTCCCC-------TTEEEEES-----CGGG-C-CCSSCEEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhC-CCCeEEEEECCHHHHHhC-------CCCcEEeC-----Chhh-c-CccCCCCEEE
Confidence 456999999999999998887653 236899999999998766 12222221 1211 1 1246899999
Q ss_pred ec--ccccC--------CCCHHHHH-----------------HHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHH
Q 012511 172 AS--YVLGE--------VPSLQDRI-----------------TIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHIL 222 (462)
Q Consensus 172 as--~vL~e--------l~~~~~r~-----------------~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL 222 (462)
++ |.-.. +. .+.+. .++..+.+. +||.+++|-|..-........+|+.++
T Consensus 104 ~NPPy~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 104 GNPPYGIVGEASKYPIHVF-KAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp ECCCCCCBSCTTTCSBCCC-HHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred ECcCccCcccccccccccC-HHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 96 22111 22 22221 234444332 699999988764221122356788887
Q ss_pred H
Q 012511 223 W 223 (462)
Q Consensus 223 ~ 223 (462)
+
T Consensus 183 ~ 183 (421)
T 2ih2_A 183 R 183 (421)
T ss_dssp H
T ss_pred h
Confidence 4
No 230
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.17 E-value=5.1e-07 Score=92.30 Aligned_cols=102 Identities=14% Similarity=0.164 Sum_probs=59.2
Q ss_pred CCCeEEEECCc------h-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGAG------T-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~G------~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~ 164 (462)
++.+|||+||| + |..+..+...++ ..+|++||+|+.|. . ...++.++.....-..+...+....
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP--~a~V~GVDiSp~m~------~-~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP--RGQIYGLDIMDKSH------V-DELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCT--TCEEEEEESSCCGG------G-CBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCC--CCEEEEEECCHHHh------h-cCCCcEEEEecccccchhhhhhccc
Confidence 56899999999 4 554444555565 36899999999983 1 1123333322110000000010114
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecC
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPG 206 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpG 206 (462)
++||+|++.. .++. .+....++.+++. +||.+|+.+..
T Consensus 287 ~sFDlVisdg-sH~~---~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDG-SHIN---AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECS-CCCH---HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCccEEEECC-cccc---hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6899999864 3443 3344566666654 79999997644
No 231
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.16 E-value=1e-05 Score=84.26 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=71.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccC--CCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDIS--KSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~--~~~~~f 167 (462)
.+.+|||+|||+|..+..+++.++. ..+++++|+|+.+++.++..++..+ ++.++.. +... ++ ...++|
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~-~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~-----D~~~-~~~~~~~~~f 331 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKN-KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVK-----DARK-APEIIGEEVA 331 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS-----CTTC-CSSSSCSSCE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCC-CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEc-----Chhh-cchhhccCCC
Confidence 3579999999999999988887752 3689999999999999998876432 2222211 1211 21 223679
Q ss_pred cEEEe------cccccCCCCHHH-------------HHHHHHHHHhc--CCCEEEEEecCC
Q 012511 168 DLVIA------SYVLGEVPSLQD-------------RITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVia------s~vL~el~~~~~-------------r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
|+|++ ..+++..++..- ...++.++++. +||.||++.-..
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99996 334444433210 13466666664 799999887643
No 232
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.16 E-value=7.7e-06 Score=83.12 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=66.6
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|+.+..++...+ ..+++++|+|+.|++.|+..+...+ ++.++.. +.. .++....+||
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~--~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~-----D~~-~~~~~~~~fD 288 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY--SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQG-----DAT-QLSQYVDSVD 288 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC--CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEEC-----CGG-GGGGTCSCEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-----Chh-hCCcccCCcC
Confidence 347999999999999988887532 2379999999999999999876432 2222222 122 1333457899
Q ss_pred EEEecccccCCC----CHHHH-HHHHHHHHhcCCCEEEEEec
Q 012511 169 LVIASYVLGEVP----SLQDR-ITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 169 LVias~vL~el~----~~~~r-~~~i~~Lw~~~gG~LVlVEp 205 (462)
+||++-..++-. ..... ..+++.+.+..+|.++++..
T Consensus 289 ~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~ 330 (373)
T 3tm4_A 289 FAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITT 330 (373)
T ss_dssp EEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 999975544321 12221 23444444423677777754
No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.15 E-value=7.5e-06 Score=75.26 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=32.6
Q ss_pred HHHHHHCCCC-CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHH
Q 012511 82 CEVRRRLPGF-SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQS 129 (462)
Q Consensus 82 ~eL~~rlp~~-~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ 129 (462)
.+|..+...+ ++.+|||+|||||..+..+++. ..+|++||+++.
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~----~~~V~gvD~~~~ 58 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL----ARKIISIDLQEM 58 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT----CSEEEEEESSCC
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc----CCcEEEEecccc
Confidence 3444443333 3479999999999999888764 468999999974
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.14 E-value=6.5e-06 Score=80.56 Aligned_cols=86 Identities=20% Similarity=0.164 Sum_probs=56.7
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhh
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALN 157 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~ 157 (462)
+..+...++...+.+|||+|||+|..+..+++. ..+|++||+|+.|++.+++.+.... ++.++.. +..
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-----D~~ 87 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK----AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVG-----DVL 87 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH----SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES-----CTT
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-----cee
Confidence 334444444345579999999999998888874 3489999999999999998875432 1222221 111
Q ss_pred hccCCCCCcccEEEecccccC
Q 012511 158 KDISKSEREHDLVIASYVLGE 178 (462)
Q Consensus 158 ~~l~~~~~~fDLVias~vL~e 178 (462)
. ++ ...||+|+++...+.
T Consensus 88 ~-~~--~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 88 K-TD--LPFFDTCVANLPYQI 105 (285)
T ss_dssp T-SC--CCCCSEEEEECCGGG
T ss_pred c-cc--chhhcEEEEecCccc
Confidence 1 12 237999998655443
No 235
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.14 E-value=8.3e-06 Score=84.56 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=71.3
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCce
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLI 147 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i 147 (462)
++.+-.....++..+...+....+.+|||+|||+|+.+..++.. ..+|+++|.|+.|++.|+..+.... ++.++
T Consensus 264 ~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~----~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~ 339 (433)
T 1uwv_A 264 IQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ----AASVVGVEGVPALVEKGQQNARLNGLQNVTFY 339 (433)
T ss_dssp CCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh----CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Confidence 34443334444444444443334579999999999999888863 4689999999999999998875322 23232
Q ss_pred ecchhHhhhhhcc---CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 148 HSYNSIQALNKDI---SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 148 ~~~~~~~~l~~~l---~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
.. ++...+ +....+||+|++.---..+ . ++++.+.+...+.+|.|.
T Consensus 340 ~~-----d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~---~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 340 HE-----NLEEDVTKQPWAKNGFDKVLLDPARAGA---A---GVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp EC-----CTTSCCSSSGGGTTCCSEEEECCCTTCC---H---HHHHHHHHHCCSEEEEEE
T ss_pred EC-----CHHHHhhhhhhhcCCCCEEEECCCCccH---H---HHHHHHHhcCCCeEEEEE
Confidence 22 122111 2234579999985322222 1 344555443335555554
No 236
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.12 E-value=4.7e-06 Score=79.39 Aligned_cols=83 Identities=11% Similarity=0.072 Sum_probs=52.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C-CCceecchhHhh-hhhccCCC-CCc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D-LPLIHSYNSIQA-LNKDISKS-ERE 166 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~-l~~~l~~~-~~~ 166 (462)
.+.+|||+|||+|..+..++...+ ..+++++|+|+.|++.|++.+.... + +.++... ..+ +...++.. ..+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP--QKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc--hhhhhhhhhhcccCCc
Confidence 457999999999987777666543 2589999999999999998875432 1 2222211 000 11112111 258
Q ss_pred ccEEEecccccC
Q 012511 167 HDLVIASYVLGE 178 (462)
Q Consensus 167 fDLVias~vL~e 178 (462)
||+|+++-..+.
T Consensus 141 fD~i~~npp~~~ 152 (254)
T 2h00_A 141 YDFCMCNPPFFA 152 (254)
T ss_dssp BSEEEECCCCC-
T ss_pred ccEEEECCCCcc
Confidence 999999855443
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.11 E-value=2.7e-06 Score=86.67 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=68.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||+|+.+..++.. ..+|+++|.|+.|++.|+..+...+ ++.++... ...+...+.....+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d--~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEAN--AFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESC--HHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECC--HHHHHHHHHhcCCCeeE
Confidence 3579999999999998888774 3589999999999999998875432 22222221 11111111112468999
Q ss_pred EEecccccCCC--CH----HHHHHHHHHHHhc--CCCEEEEEecCCCCc
Q 012511 170 VIASYVLGEVP--SL----QDRITIVRQLWDL--TRDVLVLVEPGTPQG 210 (462)
Q Consensus 170 Vias~vL~el~--~~----~~r~~~i~~Lw~~--~gG~LVlVEpGtp~G 210 (462)
|++.--..... .. .....++..+.+. +||.|++........
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 331 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT 331 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 99843211111 11 1222344444443 799999987654333
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.09 E-value=1.2e-05 Score=82.19 Aligned_cols=114 Identities=13% Similarity=0.026 Sum_probs=69.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|+.+..++.. + ..+|+++|.|+.|++.|++.+.... ++.++... ...+...+.....+||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d--~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS--AFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECC--HHHHHHHHHhhCCCCC
Confidence 3579999999999999888873 2 4589999999999999998876432 22222221 1111111111246899
Q ss_pred EEEecccccCCCC--H----HHHHHHHHHHHhc--CCCEEEEEecCCCCc
Q 012511 169 LVIASYVLGEVPS--L----QDRITIVRQLWDL--TRDVLVLVEPGTPQG 210 (462)
Q Consensus 169 LVias~vL~el~~--~----~~r~~~i~~Lw~~--~gG~LVlVEpGtp~G 210 (462)
+|++.--...... . .....++..+.+. +||.|+++.......
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 341 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD 341 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC
Confidence 9998532211110 0 1223344555443 799999987654433
No 239
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.07 E-value=6.8e-06 Score=79.29 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=42.9
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCcee
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIH 148 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~ 148 (462)
..+.+|||+|||+|..+..+++. ..+|++||.++.|++.+++.+....++.+++
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~----~~~V~avEid~~~~~~~~~~~~~~~~v~~i~ 81 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTE----CDNLALVEIDRDLVAFLQKKYNQQKNITIYQ 81 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTT----SSEEEEEECCHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCcCEEEEEcccccHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHhhCCCcEEEE
Confidence 34579999999999998888763 4689999999999999999886544444443
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.06 E-value=8.4e-06 Score=80.33 Aligned_cols=75 Identities=19% Similarity=0.133 Sum_probs=50.8
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCCCCCccc
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
..+.+|||+|||+|..+..+++. ..+|++||+|+.|++.+++.+... .++.++. .+.. .+ ...+||
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~----~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~-----~D~~-~~--~~~~~D 108 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL----AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYE-----GDAI-KT--VFPKFD 108 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT----SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC---------CC-SS--CCCCCS
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-----Cchh-hC--CcccCC
Confidence 34579999999999998887763 458999999999999999877422 2222221 1221 12 234799
Q ss_pred EEEeccccc
Q 012511 169 LVIASYVLG 177 (462)
Q Consensus 169 LVias~vL~ 177 (462)
+|+++...+
T Consensus 109 ~Vv~n~py~ 117 (299)
T 2h1r_A 109 VCTANIPYK 117 (299)
T ss_dssp EEEEECCGG
T ss_pred EEEEcCCcc
Confidence 999865443
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.05 E-value=1.1e-05 Score=82.61 Aligned_cols=109 Identities=13% Similarity=0.035 Sum_probs=65.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.+.+|||+|||+|+.+..++.. ...+|++||.|+.+++.|++.++..+ ++.++... ...+...+.....+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~---g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D--~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMG---GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDD--VFKLLRTYRDRGEKF 294 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESC--HHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeccCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECC--HHHHHHHHHhcCCCC
Confidence 3579999999999998888763 13589999999999999998875322 22222221 111111111124589
Q ss_pred cEEEecccc--------cCCCCHHHHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 168 DLVIASYVL--------GEVPSLQDRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 168 DLVias~vL--------~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
|+|++.--. .... .....++..+.+. +||.|++.....
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGAC--RGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCC--THHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CEEEECCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999986311 1111 1222333333332 789988876443
No 242
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.05 E-value=5.7e-06 Score=81.90 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=54.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeC----CHHHHHHHHHhhcCCCCCCceecchhHh-hhhhccCCCCCcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEP----SQSMQRAGQSLMQGPKDLPLIHSYNSIQ-ALNKDISKSEREH 167 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~----S~~ml~~Ak~ll~~~~~~~~i~~~~~~~-~l~~~l~~~~~~f 167 (462)
..+|||+|||||..+..+++. .+|++||. ++.+++.. ..+.. ..+.+... .. ++. .....+|
T Consensus 83 g~~VLDlGcG~G~~s~~la~~-----~~V~gvD~~~~~~~~~~~~~--~~~~~-~~~~v~~~--~~~D~~---~l~~~~f 149 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL-----KNVREVKGLTKGGPGHEEPI--PMSTY-GWNLVRLQ--SGVDVF---FIPPERC 149 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS-----TTEEEEEEECCCSTTSCCCC--CCCST-TGGGEEEE--CSCCTT---TSCCCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhc-----CCEEEEeccccCchhHHHHH--Hhhhc-CCCCeEEE--eccccc---cCCcCCC
Confidence 379999999999998888763 46999999 56544211 01111 01112110 01 111 1134589
Q ss_pred cEEEeccccc---CCCCHH---HHHHHHHHHHhcCCCEEEEEec
Q 012511 168 DLVIASYVLG---EVPSLQ---DRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 168 DLVias~vL~---el~~~~---~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
|+|++..+++ ++.+.. ..+..+.++++ |||.||+--.
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~Lk-pGG~~v~kv~ 192 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLS-NNTQFCVKVL 192 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCEEEEEES
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 9999977654 111111 12233444444 7998887443
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.03 E-value=3.6e-06 Score=92.51 Aligned_cols=106 Identities=13% Similarity=0.101 Sum_probs=64.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC----CCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK----DLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~----~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
++.+|||+|||+|..+.+++.. ...+|++||.|+.|++.|++.++..+ ++.++... ....++...++|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~---ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D-----~~~~l~~~~~~f 610 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG---GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD-----CLAWLREANEQF 610 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESC-----HHHHHHHCCCCE
T ss_pred CCCcEEEeeechhHHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecC-----HHHHHHhcCCCc
Confidence 3579999999999988887762 24579999999999999999875432 12222221 111122234689
Q ss_pred cEEEecccc---c-----CCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 168 DLVIASYVL---G-----EVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 168 DLVias~vL---~-----el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
|+||+.--- + .+........++..+.+. +||.|++.-.
T Consensus 611 D~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 611 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 999984311 0 011012223344444332 6999986543
No 244
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.02 E-value=1.2e-05 Score=84.10 Aligned_cols=107 Identities=16% Similarity=0.042 Sum_probs=68.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCC-CCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKD-LPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~-~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||||..+.++++.++. ...|+++|+|+.|++.+++.++..+- +.++... ...+.. ...++||+|
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~-~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~D--a~~l~~---~~~~~FD~I 174 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGG-KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAP--PRALAE---AFGTYFHRV 174 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSC--HHHHHH---HHCSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECC--HHHhhh---hccccCCEE
Confidence 4579999999999999998887763 35899999999999999998764321 2222211 111211 124689999
Q ss_pred Eec------ccccCCCCH------H-------HHHHHHHHHHhc--CCCEEEEEe
Q 012511 171 IAS------YVLGEVPSL------Q-------DRITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 171 ias------~vL~el~~~------~-------~r~~~i~~Lw~~--~gG~LVlVE 204 (462)
++. .++..-++. + ....++..+++. +||.||...
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 951 222222221 1 124566666664 799999754
No 245
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.02 E-value=1.1e-05 Score=84.74 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=68.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC--CCCCceecchhHhhhhhccCC-CCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP--KDLPLIHSYNSIQALNKDISK-SEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~--~~~~~i~~~~~~~~l~~~l~~-~~~~fD 168 (462)
.+.+|||+|||||..+..+++..+. ...|+++|+|+.|++.+++.++.. .++.++... .. .++. ...+||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~-~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D-----~~-~~~~~~~~~fD 189 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNN-EGAILANEFSASRVKVLHANISRCGISNVALTHFD-----GR-VFGAAVPEMFD 189 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCC-----ST-THHHHSTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC-----HH-HhhhhccccCC
Confidence 3579999999999999888887652 468999999999999999887642 232222211 11 1111 245899
Q ss_pred EEEec------ccccCCCC------HH-------HHHHHHHHHHhc--CCCEEEEEec
Q 012511 169 LVIAS------YVLGEVPS------LQ-------DRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 169 LVias------~vL~el~~------~~-------~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
+|++. .++...++ .. ....++..+++. +||.||+..-
T Consensus 190 ~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 190 AILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp EEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 99972 22332221 11 122455555553 7999998654
No 246
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.02 E-value=3.8e-05 Score=79.48 Aligned_cols=95 Identities=12% Similarity=0.025 Sum_probs=59.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCCCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISKSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~~~~~fDLV 170 (462)
.+.+|||+|||+|+.+..++.. ..+|++||.|+.|++.|+..+...+ .+.++.. +....+ ..+||+|
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~----~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~-----d~~~~~---~~~fD~V 357 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR----GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVA-----SDREVS---VKGFDTV 357 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEEC-----CTTTCC---CTTCSEE
T ss_pred CCCEEEEeeccchHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEC-----ChHHcC---ccCCCEE
Confidence 3479999999999999888873 4589999999999999998875321 1222211 222111 1279999
Q ss_pred EecccccCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012511 171 IASYVLGEVPSLQDRITIVRQLWDLTRDVLVL 202 (462)
Q Consensus 171 ias~vL~el~~~~~r~~~i~~Lw~~~gG~LVl 202 (462)
++.--...+. ...+..+..+ .++|.+++
T Consensus 358 v~dPPr~g~~--~~~~~~l~~l--~p~givyv 385 (425)
T 2jjq_A 358 IVDPPRAGLH--PRLVKRLNRE--KPGVIVYV 385 (425)
T ss_dssp EECCCTTCSC--HHHHHHHHHH--CCSEEEEE
T ss_pred EEcCCccchH--HHHHHHHHhc--CCCcEEEE
Confidence 9864433331 2233333332 36776665
No 247
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.01 E-value=1.8e-05 Score=81.79 Aligned_cols=108 Identities=18% Similarity=0.196 Sum_probs=71.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccC--CCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDIS--KSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~--~~~~~fD 168 (462)
.+.+|||+|||+|..+..+++..+. .+++++|.|+.+++.++..+...+ ++.++.. +... ++ ....+||
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~--~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~-----D~~~-~~~~~~~~~fD 317 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-----DGRY-PSQWCGEQQFD 317 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTT--CEEEEEESSTTTHHHHHHHHHHTTCCCEEEEC-----CTTC-THHHHTTCCEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeC-----chhh-chhhcccCCCC
Confidence 4579999999999999988887753 689999999999999998876432 2222221 1111 11 1236899
Q ss_pred EEEe------cccccCCCCHH-------------HHHHHHHHHHhc--CCCEEEEEecCC
Q 012511 169 LVIA------SYVLGEVPSLQ-------------DRITIVRQLWDL--TRDVLVLVEPGT 207 (462)
Q Consensus 169 LVia------s~vL~el~~~~-------------~r~~~i~~Lw~~--~gG~LVlVEpGt 207 (462)
+|++ ..+++..++.. ....++.++++. +||.||+..-..
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9996 23444444321 113566666664 799999977543
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.97 E-value=2.4e-05 Score=74.73 Aligned_cols=60 Identities=10% Similarity=0.197 Sum_probs=45.3
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCC
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDL 144 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~ 144 (462)
+..+...++...+.+|||+|||+|..+..+++. ..+|++||.|+.|++.+++.+....++
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~v 78 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR----CNFVTAIEIDHKLCKTTENKLVDHDNF 78 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHTTTCCSE
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc----CCeEEEEECCHHHHHHHHHhhccCCCe
Confidence 344444443334579999999999999888874 258999999999999999887653333
No 249
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.96 E-value=2e-05 Score=82.16 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=67.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--CCCceecchhHhhhhhccCCCCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--DLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
.+.+|||+|||||..+.++++..+. ...|+++|+|+.+++.+++.++..+ ++.++... ...+.. ...++||+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~-~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~D--a~~l~~---~~~~~FD~ 178 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKG-KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHA--PAELVP---HFSGFFDR 178 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTT-CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCC--HHHHHH---HHTTCEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCC--HHHhhh---hccccCCE
Confidence 4579999999999988888876653 4689999999999999998876432 22222211 111211 12468999
Q ss_pred EEecc---cccCCC-CHHH---------------HHHHHHHHHhc--CCCEEEEEe
Q 012511 170 VIASY---VLGEVP-SLQD---------------RITIVRQLWDL--TRDVLVLVE 204 (462)
Q Consensus 170 Vias~---vL~el~-~~~~---------------r~~~i~~Lw~~--~gG~LVlVE 204 (462)
|++.- .+..+. +++. ...++..+++. +||.||...
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99732 112111 1111 12456666654 799998754
No 250
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.95 E-value=1.7e-05 Score=77.14 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=41.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCcee
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIH 148 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~ 148 (462)
.. +|||+|||+|..+..+++. ..+|++||.|+.|++.+++.+.. .++.+++
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~----~~~V~avEid~~~~~~l~~~~~~-~~v~vi~ 97 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEA----GAEVTAIEKDLRLRPVLEETLSG-LPVRLVF 97 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHT----TCCEEEEESCGGGHHHHHHHTTT-SSEEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHc----CCEEEEEECCHHHHHHHHHhcCC-CCEEEEE
Confidence 45 9999999999999988874 35899999999999999988764 3343443
No 251
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.95 E-value=1.3e-05 Score=79.17 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=54.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhccCC-CCCcccE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKDISK-SEREHDL 169 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~l~~-~~~~fDL 169 (462)
.+.+|||+|||+|..+.++++.++ ..+|+++|.|+.|++.|++.+...+ ++.+++... ..+...+.. ...+||.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~--~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~--~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCP--GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY--READFLLKTLGIEKVDG 101 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG--GGHHHHHHHTTCSCEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCH--HHHHHHHHhcCCCCCCE
Confidence 457999999999999999888775 3589999999999999999876542 333443321 112111110 1247999
Q ss_pred EEecc
Q 012511 170 VIASY 174 (462)
Q Consensus 170 Vias~ 174 (462)
|++..
T Consensus 102 Vl~D~ 106 (301)
T 1m6y_A 102 ILMDL 106 (301)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98754
No 252
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.94 E-value=5.9e-05 Score=76.41 Aligned_cols=64 Identities=19% Similarity=0.142 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 72 AVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 72 ~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
.|......++..+...+.. .+.+|||+|||+|+.+..++.. ..+|++||.|+.|++.|+..++.
T Consensus 194 ~n~~~~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~----~~~V~gvd~~~~ai~~a~~n~~~ 257 (369)
T 3bt7_A 194 PNAAMNIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN----FDRVLATEIAKPSVAAAQYNIAA 257 (369)
T ss_dssp SBHHHHHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG----SSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHH
Confidence 3443334444444444332 3578999999999999887762 35899999999999999988753
No 253
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.93 E-value=3.1e-05 Score=74.34 Aligned_cols=55 Identities=27% Similarity=0.355 Sum_probs=42.2
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++..+...++...+.+|||+|||+|..+..+++. + ..+|++||.|+.|++.+++.
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~--~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P--LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C--CSEEEEECCCHHHHHHHTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C--CCeEEEEECCHHHHHHHHhc
Confidence 3444444444345679999999999999888763 2 36899999999999999876
No 254
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.91 E-value=2.2e-05 Score=78.53 Aligned_cols=98 Identities=15% Similarity=0.094 Sum_probs=63.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC---CCCceecchhHhhhhhccCCCCCccc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK---DLPLIHSYNSIQALNKDISKSEREHD 168 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fD 168 (462)
.+.+|||+|||+|..+.. +. ...+|+++|.|+.+++.|++.++..+ ++.++.. +... . . .+||
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~----~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~-----D~~~-~--~-~~fD 260 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK----NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILS-----DVRE-V--D-VKGN 260 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT----TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-----CGGG-C--C-CCEE
T ss_pred CCCEEEEccCccCHHHHh-cc----CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-----ChHH-h--c-CCCc
Confidence 357999999999998887 64 25689999999999999998875432 1222221 1211 1 1 6899
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 169 LVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 169 LVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
+|++..-- .....+..+.++++ +||.|++.+....
T Consensus 261 ~Vi~dpP~----~~~~~l~~~~~~L~-~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 261 RVIMNLPK----FAHKFIDKALDIVE-EGGVIHYYTIGKD 295 (336)
T ss_dssp EEEECCTT----TGGGGHHHHHHHEE-EEEEEEEEEEESS
T ss_pred EEEECCcH----hHHHHHHHHHHHcC-CCCEEEEEEeecC
Confidence 99985211 11122333344443 6999999876554
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.76 E-value=5.2e-05 Score=78.72 Aligned_cols=124 Identities=15% Similarity=0.191 Sum_probs=74.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCC-----------CccEEEEEeCCHHHHHHHHHhhc--CCC--CCCceecchhHhhh
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPR-----------SLEKVNLVEPSQSMQRAGQSLMQ--GPK--DLPLIHSYNSIQAL 156 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~-----------~~~~v~~VD~S~~ml~~Ak~ll~--~~~--~~~~i~~~~~~~~l 156 (462)
...+|||.|||+|.++.++.+.+.. ....++|+|+++.|++.|+..+. +.. +..+.+.. .+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD----~l 246 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCED----SL 246 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECC----TT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCC----CC
Confidence 3469999999999998887765311 12479999999999999987653 221 22222221 11
Q ss_pred hhccCCCCCcccEEEecccccCCCCH--------------HHHHHHHHHHHhc--CCCEEEEEecCCC--CchHHHHHHH
Q 012511 157 NKDISKSEREHDLVIASYVLGEVPSL--------------QDRITIVRQLWDL--TRDVLVLVEPGTP--QGSSIISQMR 218 (462)
Q Consensus 157 ~~~l~~~~~~fDLVias~vL~el~~~--------------~~r~~~i~~Lw~~--~gG~LVlVEpGtp--~Gf~~I~~aR 218 (462)
. .+ ...+||+|+++--++..... ..-..++..+++. +||.+++|-|... .|. .-..+|
T Consensus 247 ~--~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~-~~~~iR 322 (445)
T 2okc_A 247 E--KE-PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAG-AGETIR 322 (445)
T ss_dssp T--SC-CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCST-HHHHHH
T ss_pred C--Cc-ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCc-HHHHHH
Confidence 1 11 23489999998554433211 0113445555443 7999999887431 111 235678
Q ss_pred HHHHH
Q 012511 219 SHILW 223 (462)
Q Consensus 219 ~~lL~ 223 (462)
+.|++
T Consensus 323 ~~L~~ 327 (445)
T 2okc_A 323 KRLLQ 327 (445)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88774
No 256
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.74 E-value=4.3e-05 Score=74.62 Aligned_cols=48 Identities=10% Similarity=0.103 Sum_probs=38.0
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhh
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLM 138 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll 138 (462)
..+.+|||+|||+|..+..+++..+....+|++||+|+.|++.+++..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc
Confidence 345799999999999988888753210134999999999999998874
No 257
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.65 E-value=9.4e-05 Score=72.20 Aligned_cols=100 Identities=16% Similarity=0.100 Sum_probs=61.7
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
+.+|||+|||+|..+..++.. ...+|+++|.|+.+++.+++.++..+-...+... ..+.. .+. ....||.|++
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~---g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~--~~D~~-~~~-~~~~~D~Vi~ 198 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY--NMDNR-DFP-GENIADRILM 198 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHH---TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE--CSCTT-TCC-CCSCEEEEEE
T ss_pred CCEEEEecCcCcHHHHHHHHh---cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--eCcHH-Hhc-cccCCCEEEE
Confidence 479999999999988876653 2358999999999999999887643211111110 01111 122 3568999987
Q ss_pred cccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 173 SYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 173 s~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
+.- +...+-+...-++++ +||.|.+-+
T Consensus 199 ~~p----~~~~~~l~~a~~~lk-~gG~ih~~~ 225 (278)
T 3k6r_A 199 GYV----VRTHEFIPKALSIAK-DGAIIHYHN 225 (278)
T ss_dssp CCC----SSGGGGHHHHHHHEE-EEEEEEEEE
T ss_pred CCC----CcHHHHHHHHHHHcC-CCCEEEEEe
Confidence 642 222222333334454 689887644
No 258
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.65 E-value=5.4e-05 Score=73.03 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=50.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCH-------HHHHHHHHhhcCC--CC-CCceecchhHhhhhhccCC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQ-------SMQRAGQSLMQGP--KD-LPLIHSYNSIQALNKDISK 162 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~-------~ml~~Ak~ll~~~--~~-~~~i~~~~~~~~l~~~l~~ 162 (462)
+.+|||+|||+|..+..++.. ..+|+++|+|+ .|++.|+..++.. .+ +.++... ...+...++.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~----g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d--~~~~l~~~~~ 157 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL----GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGN--AAEQMPALVK 157 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT----TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESC--HHHHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHHh----CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECC--HHHHHHhhhc
Confidence 469999999999998888773 35799999999 9999888765321 11 3333321 1111111110
Q ss_pred CCCcccEEEecccccC
Q 012511 163 SEREHDLVIASYVLGE 178 (462)
Q Consensus 163 ~~~~fDLVias~vL~e 178 (462)
...+||+|++.-.+.+
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 0157999999766554
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.62 E-value=8.4e-05 Score=75.01 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=39.6
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
.|.+|||+|||+|..+..+... + ..++++||+++.+++.|++.+..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~--~~~Vt~VEID~~vie~Ar~~~~~ 233 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K--PKMVTMVEIDQMVIDGCKKYMRK 233 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C--CSEEEEEESCHHHHHHHHHHCCC
T ss_pred CCCEEEEEECChhHHHHHHHHC-C--CCEEEEEECCHHHHHHHHHHHHH
Confidence 5789999999999988877764 3 26899999999999999998764
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.62 E-value=0.0002 Score=73.27 Aligned_cols=106 Identities=9% Similarity=0.041 Sum_probs=63.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCC------------------------------------CccEEEEEeCCHHHHHHHHH
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPR------------------------------------SLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~------------------------------------~~~~v~~VD~S~~ml~~Ak~ 136 (462)
...|||.+||+|+++..++..-.+ ...+++++|.|+.|++.|+.
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 368999999999988765543211 11469999999999999999
Q ss_pred hhcCCC--C-CCceecchhHhhhhhccCCCCCcccEEEecccccC-CCCHHHHHH---HHHHHHhc-CCCEEEEEec
Q 012511 137 LMQGPK--D-LPLIHSYNSIQALNKDISKSEREHDLVIASYVLGE-VPSLQDRIT---IVRQLWDL-TRDVLVLVEP 205 (462)
Q Consensus 137 ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~e-l~~~~~r~~---~i~~Lw~~-~gG~LVlVEp 205 (462)
.+...+ + +.++.. ++.. ++ ...+||+||++--.++ +.+..+... .+...++. +||.+.++-.
T Consensus 282 Na~~~gl~~~I~~~~~-----D~~~-~~-~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQL-----QVAD-FQ-TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHTTCTTCSEEEEC-----CGGG-CC-CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHcCCCCceEEEEC-----ChHh-CC-CCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 876432 1 222222 2221 22 2358999999832221 111122222 23333433 5888888765
No 261
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.61 E-value=0.0002 Score=73.13 Aligned_cols=105 Identities=8% Similarity=0.008 Sum_probs=64.7
Q ss_pred CCeEEEECCchhHHHHHHHHhCCC------------------------------------CccEEEEEeCCHHHHHHHHH
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPR------------------------------------SLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~------------------------------------~~~~v~~VD~S~~ml~~Ak~ 136 (462)
...|||.+||+|+++..++..-.+ ...+++++|.|+.|++.|+.
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 368999999999988765543111 01359999999999999999
Q ss_pred hhcCCCC---CCceecchhHhhhhhccCCCCCcccEEEec--ccccCCCCHHHHHHHH---HHHHhc-CCCEEEEEec
Q 012511 137 LMQGPKD---LPLIHSYNSIQALNKDISKSEREHDLVIAS--YVLGEVPSLQDRITIV---RQLWDL-TRDVLVLVEP 205 (462)
Q Consensus 137 ll~~~~~---~~~i~~~~~~~~l~~~l~~~~~~fDLVias--~vL~el~~~~~r~~~i---~~Lw~~-~gG~LVlVEp 205 (462)
++...+- +.++.. ++.. ++. ..+||+||++ |... +.+..+...+. ...++. +|+.+.|+-+
T Consensus 275 Na~~~gl~~~I~~~~~-----D~~~-l~~-~~~fD~Iv~NPPYG~r-l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQM-----RLQD-FKT-NKINGVLISNPPYGER-LLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHTTCTTTEEEEEC-----CGGG-CCC-CCCSCEEEECCCCTTT-TSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHcCCCCceEEEEC-----ChHH-CCc-cCCcCEEEECCchhhc-cCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 8865431 222221 2221 222 3489999998 4432 33333333333 334443 6888888765
No 262
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.60 E-value=0.00033 Score=68.73 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=54.7
Q ss_pred CCCeEEEECC------chhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCc-eecchhHhhhhhccCCCC
Q 012511 92 SPAKVLDFGA------GTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPL-IHSYNSIQALNKDISKSE 164 (462)
Q Consensus 92 ~p~rVLDvG~------G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~-i~~~~~~~~l~~~l~~~~ 164 (462)
.+.+|||+|| |||+ .. ++...+ ...+|++||+|+. + .++.+ +.. ++.. ++ ..
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs-~~-~a~~~~-~~~~V~gvDis~~--------v---~~v~~~i~g-----D~~~-~~-~~ 121 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT-AV-LRQWLP-TGTLLVDSDLNDF--------V---SDADSTLIG-----DCAT-VH-TA 121 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH-HH-HHHHSC-TTCEEEEEESSCC--------B---CSSSEEEES-----CGGG-CC-CS
T ss_pred CCCEEEEeCCCCCCCCCcHH-HH-HHHHcC-CCCEEEEEECCCC--------C---CCCEEEEEC-----cccc-CC-cc
Confidence 3469999999 6677 33 344454 2468999999987 1 23444 432 2322 22 23
Q ss_pred CcccEEEeccccc--------CCCC---HHHHHHHHHHHHhcCCCEEEEEecCC
Q 012511 165 REHDLVIASYVLG--------EVPS---LQDRITIVRQLWDLTRDVLVLVEPGT 207 (462)
Q Consensus 165 ~~fDLVias~vL~--------el~~---~~~r~~~i~~Lw~~~gG~LVlVEpGt 207 (462)
.+||+|+++...+ +... ....+..+.++++ +||.|++.....
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~ 174 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEH 174 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSS
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcC-CCcEEEEEEecc
Confidence 6899999864322 1111 1133444555554 699999866433
No 263
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.59 E-value=5.6e-05 Score=72.68 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=35.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
...+|||+|||+|..+. +.. -+ ..+|++||+++.|++.+++.+..
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~--~~~v~avEid~~~~~~a~~~~~~ 65 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ER--LDQLTVIELDRDLAARLQTHPFL 65 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TT--CSCEEEECCCHHHHHHHHTCTTT
T ss_pred CcCEEEEECCCCcHHHH-hhh-CC--CCeEEEEECCHHHHHHHHHHhcc
Confidence 44789999999998887 553 11 12399999999999999987654
No 264
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.56 E-value=4.5e-05 Score=78.42 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=50.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC----CCCCceecchhHhhhhhccCC-CCCcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP----KDLPLIHSYNSIQALNKDISK-SEREH 167 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~----~~~~~i~~~~~~~~l~~~l~~-~~~~f 167 (462)
+.+|||+|||+|..+.+++.. ..+|++||.|+.|++.|+.+++.. .++.+++.. ....++. ...+|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~----g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~D-----a~~~L~~~~~~~f 164 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGD-----FKEYLPLIKTFHP 164 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESC-----GGGSHHHHHHHCC
T ss_pred CCEEEEeCCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECc-----HHHhhhhccCCCc
Confidence 579999999999998887763 458999999999999999987632 223333321 1111111 12479
Q ss_pred cEEEec
Q 012511 168 DLVIAS 173 (462)
Q Consensus 168 DLVias 173 (462)
|+|++.
T Consensus 165 DvV~lD 170 (410)
T 3ll7_A 165 DYIYVD 170 (410)
T ss_dssp SEEEEC
T ss_pred eEEEEC
Confidence 999984
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.54 E-value=0.0004 Score=68.74 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=41.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP 141 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~ 141 (462)
.+.+|||+|||+|..+..+++..+ ...+|+++|+++.+++.+++.++..
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~-~~g~V~a~D~~~~~l~~~~~n~~r~ 150 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLK-NQGKIFAFDLDAKRLASMATLLARA 150 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 347999999999998888887654 2468999999999999999988653
No 266
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.53 E-value=0.00022 Score=72.81 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=63.4
Q ss_pred CCeEEEECCchhHHHHHHHHh----------------CCC--------------------CccEEEEEeCCHHHHHHHHH
Q 012511 93 PAKVLDFGAGTGSAFWALREV----------------WPR--------------------SLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~----------------~~~--------------------~~~~v~~VD~S~~ml~~Ak~ 136 (462)
..+|||.|||+|+++..++.. |+. ...+|+++|+|+.|++.|+.
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 468999999999988776543 111 11479999999999999999
Q ss_pred hhcCCC---CCCceecchhHhhhhhccCCCCCcccEEEecccccCCCC-HHHHHHH---HHHHHhc-CCCEEEEEec
Q 012511 137 LMQGPK---DLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPS-LQDRITI---VRQLWDL-TRDVLVLVEP 205 (462)
Q Consensus 137 ll~~~~---~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~-~~~r~~~---i~~Lw~~-~gG~LVlVEp 205 (462)
.+...+ .+.+... ++.. ++ ...+||+||++--..+--. ..+...+ +...++. +|+.+.++-+
T Consensus 276 Na~~~gl~~~i~~~~~-----D~~~-l~-~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVG-----DATQ-FK-SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHTCGGGEEEEEC-----CGGG-CC-CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHcCCCCceEEEEC-----Chhh-cC-cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 876432 1222221 2222 22 2358999999644332211 1222222 3333433 5788887765
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.44 E-value=0.00023 Score=72.46 Aligned_cols=46 Identities=24% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+.+|||+|||+|..+..++...+ ..+|+++|.++.+++.++++++.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~--~~~V~avDi~~~av~~a~~N~~~ 93 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETP--AEEVWLNDISEDAYELMKRNVML 93 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSS--CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHH
Confidence 57999999999999888877655 24799999999999999988754
No 268
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.41 E-value=0.00087 Score=73.81 Aligned_cols=127 Identities=11% Similarity=0.061 Sum_probs=73.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCC-CccEEEEEeCCHHHHHHH--HHhhcCC---CCCC--ceecchhHhhhhhccCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPR-SLEKVNLVEPSQSMQRAG--QSLMQGP---KDLP--LIHSYNSIQALNKDISKS 163 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~-~~~~v~~VD~S~~ml~~A--k~ll~~~---~~~~--~i~~~~~~~~l~~~l~~~ 163 (462)
.+.+|||.|||+|+++.+++..++. ....++|+|+++.+++.| +..+... .... .+... ++.......
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~d----D~L~~~~~~ 396 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGE----DVCSLNPED 396 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECC----CGGGCCGGG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEec----chhcccccc
Confidence 3579999999999999998887652 135799999999999999 4433220 1111 11111 111100123
Q ss_pred CCcccEEEec--ccccCCCCHHHH-------------------------HHHHHHHHhc--CCCEEEEEecCCCC--chH
Q 012511 164 EREHDLVIAS--YVLGEVPSLQDR-------------------------ITIVRQLWDL--TRDVLVLVEPGTPQ--GSS 212 (462)
Q Consensus 164 ~~~fDLVias--~vL~el~~~~~r-------------------------~~~i~~Lw~~--~gG~LVlVEpGtp~--Gf~ 212 (462)
..+||+||++ |....- ..... ..++....+. +||.+++|=|..-. ...
T Consensus 397 ~~kFDVVIgNPPYg~~~~-~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~ 475 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVT-DPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGN 475 (878)
T ss_dssp GTTEEEEEECCBCCSSCC-CHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSH
T ss_pred cCCCCEEEECCCcccccc-chhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCCh
Confidence 4689999996 433211 11111 1123333332 69999998775432 112
Q ss_pred HHHHHHHHHHH
Q 012511 213 IISQMRSHILW 223 (462)
Q Consensus 213 ~I~~aR~~lL~ 223 (462)
.-..+|+.|++
T Consensus 476 ~~kkLRk~LLe 486 (878)
T 3s1s_A 476 ESKAFREFLVG 486 (878)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 24567999874
No 269
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.38 E-value=1.4e-05 Score=76.17 Aligned_cols=51 Identities=16% Similarity=0.229 Sum_probs=39.4
Q ss_pred HHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhc
Q 012511 85 RRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 85 ~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~ 139 (462)
...++...+.+|||+|||+|..+..+++. ..+++++|+|+.|++.+++.+.
T Consensus 22 ~~~~~~~~~~~VLDiG~G~G~~~~~l~~~----~~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 22 IKQLNLKETDTVYEIGTGKGHLTTKLAKI----SKQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp HHHCCCCSSEEEEECSCCCSSCSHHHHHH----SSEEEESSSSCSSSSSSSCTTT
T ss_pred HHhcCCCCCCEEEEEeCCCCHHHHHHHHh----CCeEEEEECCHHHHHHHHHHhc
Confidence 33343334579999999999988887774 2589999999999988876654
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.38 E-value=0.00036 Score=74.37 Aligned_cols=126 Identities=12% Similarity=0.104 Sum_probs=73.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCC----------------ccEEEEEeCCHHHHHHHHHhhc--CCCC-----CCcee
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRS----------------LEKVNLVEPSQSMQRAGQSLMQ--GPKD-----LPLIH 148 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~----------------~~~v~~VD~S~~ml~~Ak~ll~--~~~~-----~~~i~ 148 (462)
...+|||.+||+|.++.++.+.+... ...++|+|+++.|.++|+..+. +... ..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 34699999999999988877654211 1379999999999999987653 2221 11222
Q ss_pred cchhHhhhhhccCCCCCcccEEEecccccCCCC-----------HHHHHHHHHHHHhc--CCCEEEEEecCCC--CchHH
Q 012511 149 SYNSIQALNKDISKSEREHDLVIASYVLGEVPS-----------LQDRITIVRQLWDL--TRDVLVLVEPGTP--QGSSI 213 (462)
Q Consensus 149 ~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~-----------~~~r~~~i~~Lw~~--~gG~LVlVEpGtp--~Gf~~ 213 (462)
.. + +... .....+||+||++--.+.... ...-..++..+++. +||.+++|-|... .|. .
T Consensus 249 gD-t---L~~~-~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~-~ 322 (541)
T 2ar0_A 249 GN-T---LGSD-GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGG-K 322 (541)
T ss_dssp SC-T---TSHH-HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCT-H
T ss_pred CC-C---cccc-cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCc-H
Confidence 21 1 1100 112458999999743332211 11112344444443 6999998876431 121 2
Q ss_pred HHHHHHHHHH
Q 012511 214 ISQMRSHILW 223 (462)
Q Consensus 214 I~~aR~~lL~ 223 (462)
-..+|+.|++
T Consensus 323 ~~~iR~~L~~ 332 (541)
T 2ar0_A 323 GTDIRRDLMD 332 (541)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 2467998874
No 271
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.21 E-value=0.0013 Score=66.86 Aligned_cols=101 Identities=11% Similarity=0.053 Sum_probs=54.1
Q ss_pred HHHHHHHHHHCCCC-----CCCeEEEECCchhHHHHHH--------HHhC-----CCCccEEEEEeCCHHHHH-HHHHhh
Q 012511 78 YRVLCEVRRRLPGF-----SPAKVLDFGAGTGSAFWAL--------REVW-----PRSLEKVNLVEPSQSMQR-AGQSLM 138 (462)
Q Consensus 78 ~~vL~eL~~rlp~~-----~p~rVLDvG~G~G~~~~al--------~~~~-----~~~~~~v~~VD~S~~ml~-~Ak~ll 138 (462)
..++.+....+... ++.+|+|+|||+|..+..+ .+.+ +....+|..-|.-...-. +.+.+-
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 34555444444322 2579999999999776554 2222 112467888887665433 333332
Q ss_pred cCCCC------------CC-ceecchhHhhhhhccCCCCCcccEEEecccccCCCC
Q 012511 139 QGPKD------------LP-LIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPS 181 (462)
Q Consensus 139 ~~~~~------------~~-~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~ 181 (462)
..... -+ ++... .-..+.+ .++.+++|+|+++++||++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gv-pgSFy~r--lfP~~S~d~v~Ss~aLHWls~ 165 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGV-PGSFYRR--LFPARTIDFFHSAFSLHWLSQ 165 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEE-ESCTTSC--CSCTTCEEEEEEESCTTBCSS
T ss_pred hhhhhcchhhhccccCCCceEEEec-Chhhhcc--cCCCcceEEEEecceeeeecc
Confidence 11000 01 11000 0001111 135789999999999999973
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.16 E-value=0.00065 Score=69.41 Aligned_cols=101 Identities=15% Similarity=-0.016 Sum_probs=61.4
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC--C--CCceecchhHhhhhhccC-CCCCcc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK--D--LPLIHSYNSIQALNKDIS-KSEREH 167 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~--~--~~~i~~~~~~~~l~~~l~-~~~~~f 167 (462)
+.+|||++||+|..+..++...+ ...+|+++|.|+.+++.+++.++..+ + +.++.. +....+. ....+|
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~-ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~-----Da~~~l~~~~~~~f 126 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETS-CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGM-----EANFFLRKEWGFGF 126 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCS-CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-----CHHHHHHSCCSSCE
T ss_pred CCEEEECCCcccHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeC-----CHHHHHHHhhCCCC
Confidence 46999999999998877666432 23689999999999999999886432 1 222221 1111111 123579
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012511 168 DLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 204 (462)
Q Consensus 168 DLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVE 204 (462)
|+|++.- .......+....++++ +||.|++.-
T Consensus 127 D~V~lDP----~g~~~~~l~~a~~~Lk-~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP----FGTPVPFIESVALSMK-RGGILSLTA 158 (392)
T ss_dssp EEEEECC----SSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred cEEEECC----CcCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 9999764 1122233333333333 588666544
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.10 E-value=0.0011 Score=65.12 Aligned_cols=106 Identities=13% Similarity=0.166 Sum_probs=67.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC----CCCCceecchhHhhhhhccCCCCCcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP----KDLPLIHSYNSIQALNKDISKSEREH 167 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~----~~~~~i~~~~~~~~l~~~l~~~~~~f 167 (462)
.|++||=+|.|.|..+..+.... ...++++||+++.+++.+++-+... -+-|.+... ..+-...+....++|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~--~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~--~~Dg~~~l~~~~~~y 158 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK--NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNFVNQTSQTF 158 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT--TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE--ESCTTTTTSCSSCCE
T ss_pred CCCeEEEECCCchHHHHHHHHcC--CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEE--echHHHHHhhccccC
Confidence 57999999999999998888754 3679999999999999999876321 112332211 111112233356789
Q ss_pred cEEEecccc-----cCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 168 DLVIASYVL-----GEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 168 DLVias~vL-----~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
|+||+-..= ..|- ..+-.+.+++.++ +||++|.-
T Consensus 159 DvIi~D~~dp~~~~~~L~-t~eFy~~~~~~L~-p~Gv~v~q 197 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLF-TSAFYEGCKRCLN-PGGIFVAQ 197 (294)
T ss_dssp EEEEESCCCCCCTTCCSS-CCHHHHHHHHTEE-EEEEEEEE
T ss_pred CEEEEeCCCcCCCchhhc-CHHHHHHHHHHhC-CCCEEEEe
Confidence 999964321 1121 1234456666665 68988863
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.09 E-value=0.0024 Score=70.08 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=62.8
Q ss_pred CCeEEEECCchhHHHHHHHHh-----------------CCC-----------------------CccEEEEEeCCHHHHH
Q 012511 93 PAKVLDFGAGTGSAFWALREV-----------------WPR-----------------------SLEKVNLVEPSQSMQR 132 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~-----------------~~~-----------------------~~~~v~~VD~S~~ml~ 132 (462)
...|||.+||+|+++..++.. |+. ....++|+|+++.|++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 368999999999998765543 110 0147999999999999
Q ss_pred HHHHhhcCCCCCCceecchhHhhhhhcc-CCCCCcccEEEecccccC-CCCHH---HHHHHHHHHHhc--CCCEEEEEec
Q 012511 133 AGQSLMQGPKDLPLIHSYNSIQALNKDI-SKSEREHDLVIASYVLGE-VPSLQ---DRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 133 ~Ak~ll~~~~~~~~i~~~~~~~~l~~~l-~~~~~~fDLVias~vL~e-l~~~~---~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
.|+.++...+-...+.. ...+..... +...++||+||++--.++ +.+.. .....+..+++. +||.+.++-+
T Consensus 271 ~A~~N~~~agv~~~i~~--~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 271 RARTNARLAGIGELITF--EVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHTTCGGGEEE--EECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHcCCCCceEE--EECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 99998865331111110 011222111 222238999999822222 11122 222333444442 7888888754
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.98 E-value=0.001 Score=64.17 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=34.0
Q ss_pred CeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhc
Q 012511 94 AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 94 ~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~ 139 (462)
.+|||+|||+|..++.++.. ..+|++||.|+.+..+++..++
T Consensus 90 ~~VLDl~~G~G~dal~lA~~----g~~V~~vE~~~~~~~l~~~~l~ 131 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV----GCRVRMLERNPVVAALLDDGLA 131 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH----TCCEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHH
Confidence 69999999999988877764 2379999999998776665543
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.96 E-value=0.0022 Score=59.53 Aligned_cols=44 Identities=25% Similarity=0.428 Sum_probs=34.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP 141 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~ 141 (462)
+.+||++||| .+.+|.+. .+ ..+|+.||.++++.+.|+..++..
T Consensus 31 a~~VLEiGtG-ySTl~lA~--~~--~g~VvtvE~d~~~~~~ar~~l~~~ 74 (202)
T 3cvo_A 31 AEVILEYGSG-GSTVVAAE--LP--GKHVTSVESDRAWARMMKAWLAAN 74 (202)
T ss_dssp CSEEEEESCS-HHHHHHHT--ST--TCEEEEEESCHHHHHHHHHHHHHS
T ss_pred CCEEEEECch-HHHHHHHH--cC--CCEEEEEeCCHHHHHHHHHHHHHc
Confidence 5799999998 45555543 22 368999999999999999988653
No 277
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.83 E-value=0.0019 Score=63.14 Aligned_cols=45 Identities=22% Similarity=0.093 Sum_probs=38.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
....|||++||+|+.+.++... ..+++++|.++.|++.|++.++.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~----g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW----GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc----CCeEEEEeCCHHHHHHHHHHHHH
Confidence 4579999999999999988762 45899999999999999987754
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.82 E-value=0.0012 Score=70.39 Aligned_cols=126 Identities=11% Similarity=0.156 Sum_probs=72.9
Q ss_pred CCeEEEECCchhHHHHHHHHhCCC-------------CccEEEEEeCCHHHHHHHHHhhc--CCC-CCCceecchhHhhh
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPR-------------SLEKVNLVEPSQSMQRAGQSLMQ--GPK-DLPLIHSYNSIQAL 156 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~-------------~~~~v~~VD~S~~ml~~Ak~ll~--~~~-~~~~i~~~~~~~~l 156 (462)
+.+|||.+||+|.++.++.+.+.. ....++|+|+++.+..+|+..+. +.. ++...... .+
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gD----tL 320 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNAD----SF 320 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCC----TT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccc----hh
Confidence 359999999999998877654321 03579999999999999987652 221 11112111 11
Q ss_pred hhccCCCCCcccEEEec--ccccC-----------------------CCCH-HHHHHHHHHHHhc--CCCEEEEEecCCC
Q 012511 157 NKDISKSEREHDLVIAS--YVLGE-----------------------VPSL-QDRITIVRQLWDL--TRDVLVLVEPGTP 208 (462)
Q Consensus 157 ~~~l~~~~~~fDLVias--~vL~e-----------------------l~~~-~~r~~~i~~Lw~~--~gG~LVlVEpGtp 208 (462)
.. ......+||+||++ |.... ++.. ..-..++..+++. +||.+++|-|..-
T Consensus 321 ~~-~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 321 LD-DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp TS-CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred cC-cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 11 11234689999996 33211 2111 1112355555554 6999988865321
Q ss_pred --CchHHHHHHHHHHHH
Q 012511 209 --QGSSIISQMRSHILW 223 (462)
Q Consensus 209 --~Gf~~I~~aR~~lL~ 223 (462)
.+...-..+|+.|++
T Consensus 400 L~~~~~~~~~iRk~Lle 416 (544)
T 3khk_A 400 MSSNTNNEGEIRKTLVE 416 (544)
T ss_dssp HHCCGGGHHHHHHHHHH
T ss_pred hhcCcchHHHHHHHHHh
Confidence 111234567999884
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.81 E-value=0.0015 Score=70.50 Aligned_cols=131 Identities=15% Similarity=0.162 Sum_probs=70.1
Q ss_pred cCHHHHHHHHHh-cCchhHHHHHHHH-HHHHHHC----CCCCCCeEEEECCchhHHHH---HHHHhCCCCccEEEEEeCC
Q 012511 57 YRDDETIAYVAS-RMPAVYSACYRVL-CEVRRRL----PGFSPAKVLDFGAGTGSAFW---ALREVWPRSLEKVNLVEPS 127 (462)
Q Consensus 57 y~~~e~~AYla~-r~p~~Ya~~~~vL-~eL~~rl----p~~~p~rVLDvG~G~G~~~~---al~~~~~~~~~~v~~VD~S 127 (462)
.+.++...|-.. .=|--|..-.+++ ..|..+. +.+....|||+|||+|.++. .+.+.-. ...+|++||.|
T Consensus 316 ~dnL~s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~-~~vkVyAVEkn 394 (637)
T 4gqb_A 316 MDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQAD-RRIKLYAVEKN 394 (637)
T ss_dssp TSCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTT-CEEEEEEEESC
T ss_pred hhhhhhhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcC-CCcEEEEEECC
Confidence 344566666533 3344444333332 2333343 23455689999999997633 2222221 23479999999
Q ss_pred HHHHHHHHHhhcCCC--C-CCceecchhHhhhhhccCCCCCcccEEEe----cccccCCCCHHHHHHHHHHHHhcCCCE
Q 012511 128 QSMQRAGQSLMQGPK--D-LPLIHSYNSIQALNKDISKSEREHDLVIA----SYVLGEVPSLQDRITIVRQLWDLTRDV 199 (462)
Q Consensus 128 ~~ml~~Ak~ll~~~~--~-~~~i~~~~~~~~l~~~l~~~~~~fDLVia----s~vL~el~~~~~r~~~i~~Lw~~~gG~ 199 (462)
+ |...|+++.+... + +.+++. +..+ +. .+++.|+||+ ++.++|.. + +.+...+++++ +||.
T Consensus 395 p-~A~~a~~~v~~N~~~dkVtVI~g-----d~ee-v~-LPEKVDIIVSEwMG~fLl~E~m-l-evL~Ardr~LK-PgGi 462 (637)
T 4gqb_A 395 P-NAVVTLENWQFEEWGSQVTVVSS-----DMRE-WV-APEKADIIVSELLGSFADNELS-P-ECLDGAQHFLK-DDGV 462 (637)
T ss_dssp H-HHHHHHHHHHHHTTGGGEEEEES-----CTTT-CC-CSSCEEEEECCCCBTTBGGGCH-H-HHHHHHGGGEE-EEEE
T ss_pred H-HHHHHHHHHHhccCCCeEEEEeC-----ccee-cc-CCcccCEEEEEcCcccccccCC-H-HHHHHHHHhcC-CCcE
Confidence 7 5556666654322 1 223332 1221 21 2468999987 46667763 3 44445555554 5664
No 280
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.80 E-value=0.008 Score=61.09 Aligned_cols=86 Identities=16% Similarity=0.069 Sum_probs=48.0
Q ss_pred CCeEEEECCchhHHHHHHHHh--------CC-------CCccEEEEEeCC-----------HHHHHHHHHhhcCCCCCCc
Q 012511 93 PAKVLDFGAGTGSAFWALREV--------WP-------RSLEKVNLVEPS-----------QSMQRAGQSLMQGPKDLPL 146 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~--------~~-------~~~~~v~~VD~S-----------~~ml~~Ak~ll~~~~~~~~ 146 (462)
+.+|+|+|||+|..+..+... +. ....+|+.-|.- +.+.+..+..........+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 579999999999776654432 11 123577888877 5555443222111011111
Q ss_pred eecchhHhhhhhccCCCCCcccEEEecccccCCCC
Q 012511 147 IHSYNSIQALNKDISKSEREHDLVIASYVLGEVPS 181 (462)
Q Consensus 147 i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~ 181 (462)
+... .-..+.+ .++.+++|+|+++++||++.+
T Consensus 133 ~~gv-pgSFy~r--lfp~~S~d~v~Ss~aLHWls~ 164 (384)
T 2efj_A 133 IGAM-PGSFYSR--LFPEESMHFLHSCYCLHWLSQ 164 (384)
T ss_dssp EEEC-CSCTTSC--CSCTTCEEEEEEESCTTBCSS
T ss_pred EEec-chhhhhc--cCCCCceEEEEecceeeecCC
Confidence 1110 0011221 145789999999999999864
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.73 E-value=0.0018 Score=62.61 Aligned_cols=111 Identities=14% Similarity=0.063 Sum_probs=58.3
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-CCCceecchhHhhhhhc
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-DLPLIHSYNSIQALNKD 159 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-~~~~i~~~~~~~~l~~~ 159 (462)
|.++..+.......+|||+|||||..+..++... ....++++|.+..+... ...... ...++... ... +.
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~--~~~~v~g~dVGvDl~~~---pi~~~~~g~~ii~~~---~~~-dv 133 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQK--EVSGVKGFTLGRDGHEK---PMNVQSLGWNIITFK---DKT-DI 133 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTST--TEEEEEEECCCCTTCCC---CCCCCBTTGGGEEEE---CSC-CT
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhc--CCCcceeEEEeccCccc---ccccCcCCCCeEEEe---ccc-ee
Confidence 3444444222233699999999999888666532 24578888888543100 000000 00111100 000 01
Q ss_pred cCCCCCcccEEEecccccCCCCH---HHH----HHHHHHHHhcCC-CEEEE
Q 012511 160 ISKSEREHDLVIASYVLGEVPSL---QDR----ITIVRQLWDLTR-DVLVL 202 (462)
Q Consensus 160 l~~~~~~fDLVias~vL~el~~~---~~r----~~~i~~Lw~~~g-G~LVl 202 (462)
......+||+|++..+.+ -... ..+ +.+..++++ +| |.+|+
T Consensus 134 ~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~Lk-pG~G~FV~ 182 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLA-CGVDNFCV 182 (277)
T ss_dssp TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred hhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhC-CCCCeEEE
Confidence 123456899999988777 3321 112 234455554 68 99888
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.71 E-value=0.0093 Score=60.17 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=71.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
++++|||+||+||..++.+.+ ...+|++||..+ |-. .+. ..+++..+.. +.. .......++|+|+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~----rg~~V~aVD~~~-l~~---~l~-~~~~V~~~~~-----d~~-~~~~~~~~~D~vv 275 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVK----RNMWVYSVDNGP-MAQ---SLM-DTGQVTWLRE-----DGF-KFRPTRSNISWMV 275 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHH----TTCEEEEECSSC-CCH---HHH-TTTCEEEECS-----CTT-TCCCCSSCEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHH----CCCEEEEEEhhh-cCh---hhc-cCCCeEEEeC-----ccc-cccCCCCCcCEEE
Confidence 358999999999999999887 346899999864 221 121 2222222211 111 1222356899999
Q ss_pred ecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEecCCCCchHHHHHHHHHHHH
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEPGTPQGSSIISQMRSHILW 223 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEpGtp~Gf~~I~~aR~~lL~ 223 (462)
|-.+. .+.....++..++.. .++.++.+.......++.+....+.+-.
T Consensus 276 sDm~~----~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~ 325 (375)
T 4auk_A 276 CDMVE----KPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQA 325 (375)
T ss_dssp ECCSS----CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHH
T ss_pred EcCCC----ChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHH
Confidence 86543 344455556555543 3578888888777788888777777653
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.61 E-value=0.011 Score=62.91 Aligned_cols=128 Identities=15% Similarity=0.103 Sum_probs=75.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCC-CccEEEEEeCCHHHHHHHHHhhc--CCC--CCCceecchhHhhhhhccC-CCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPR-SLEKVNLVEPSQSMQRAGQSLMQ--GPK--DLPLIHSYNSIQALNKDIS-KSER 165 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~-~~~~v~~VD~S~~ml~~Ak~ll~--~~~--~~~~i~~~~~~~~l~~~l~-~~~~ 165 (462)
...+|||.+||+|.++.++.+.+.. ....++|+|+++.+..+|+..+. +.. +..+.+.. .+....+ ....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gD----tL~~d~p~~~~~ 296 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNAD----TLDEDWPTQEPT 296 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESC----TTTSCSCCSSCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecc----eecccccccccc
Confidence 3569999999999999888877642 24689999999999999987542 221 11112111 1111111 2356
Q ss_pred cccEEEec--ccccC-----------------CCCHH-HHHHHHHHHHhc---CCCEEEEEecCCCC-chHHHHHHHHHH
Q 012511 166 EHDLVIAS--YVLGE-----------------VPSLQ-DRITIVRQLWDL---TRDVLVLVEPGTPQ-GSSIISQMRSHI 221 (462)
Q Consensus 166 ~fDLVias--~vL~e-----------------l~~~~-~r~~~i~~Lw~~---~gG~LVlVEpGtp~-Gf~~I~~aR~~l 221 (462)
+||+||++ |.... ++... .-..++..+++. +||.+++|-|.... +...-..+|+.|
T Consensus 297 ~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 297 NFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKAL 376 (542)
T ss_dssp CBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHH
T ss_pred cccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHH
Confidence 89999986 22111 11000 012344444442 68999888775421 111346679998
Q ss_pred HH
Q 012511 222 LW 223 (462)
Q Consensus 222 L~ 223 (462)
++
T Consensus 377 le 378 (542)
T 3lkd_A 377 LE 378 (542)
T ss_dssp HH
T ss_pred Hh
Confidence 85
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.52 E-value=0.0018 Score=62.76 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=59.4
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l 160 (462)
|.||.++..-....+|||+|||||..+-.+.... ....++++|.+..|...+.. .......++.... -.++ .
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~--gv~sV~GvdvG~d~~~~pi~--~~~~g~~ii~~~~-~~dv---~ 150 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLK--NVKKVMAFTLGVQGHEKPIM--RTTLGWNLIRFKD-KTDV---F 150 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTST--TEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEEC-SCCG---G
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCCeeeeEEeccCccccccc--cccCCCceEEeeC-Ccch---h
Confidence 4455555422234699999999999888666533 24678899998764221100 0000000110000 0011 1
Q ss_pred CCCCCcccEEEecccccCCCCH---HHH----HHHHHHHHhcCC--CEEEE
Q 012511 161 SKSEREHDLVIASYVLGEVPSL---QDR----ITIVRQLWDLTR--DVLVL 202 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~---~~r----~~~i~~Lw~~~g--G~LVl 202 (462)
.....++|+|+|--+.+ -... ..+ +.+...+++ +| |.+|+
T Consensus 151 ~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk-~g~~G~Fv~ 199 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQ-EGNYTEFCI 199 (282)
T ss_dssp GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEE
T ss_pred hcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcC-CCCCCcEEE
Confidence 12356899999987777 3321 112 233344554 46 88887
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.51 E-value=0.002 Score=62.02 Aligned_cols=110 Identities=18% Similarity=0.152 Sum_probs=59.4
Q ss_pred CCCeEEEECCchhHHHHHHHHhC-------CCC---ccEEEEEeCCH---HHHH-----------HHHHhhcCCCC-CC-
Q 012511 92 SPAKVLDFGAGTGSAFWALREVW-------PRS---LEKVNLVEPSQ---SMQR-----------AGQSLMQGPKD-LP- 145 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~-------~~~---~~~v~~VD~S~---~ml~-----------~Ak~ll~~~~~-~~- 145 (462)
++.+|||+|+|+|..+.++.+.| |+. ..+|+++|..+ +++. .|+.+++.... ++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 45799999999998887766654 321 35899999876 4444 56666554211 00
Q ss_pred ---------ceecchhHhhhhhccCCCC----CcccEEEec-ccccCCCC--HHHHHHHHHHHHhcCCCEEEE
Q 012511 146 ---------LIHSYNSIQALNKDISKSE----REHDLVIAS-YVLGEVPS--LQDRITIVRQLWDLTRDVLVL 202 (462)
Q Consensus 146 ---------~i~~~~~~~~l~~~l~~~~----~~fDLVias-~vL~el~~--~~~r~~~i~~Lw~~~gG~LVl 202 (462)
.+.......+..+.++... ..||+|+.- +.-...+. ..+.+..+.++++ +||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE-EEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcC-CCcEEEE
Confidence 0000000112222232221 379999873 33322221 2334445555554 6999885
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.49 E-value=0.0063 Score=59.13 Aligned_cols=74 Identities=11% Similarity=0.095 Sum_probs=51.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC-CCCCcccEE
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS-KSEREHDLV 170 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~-~~~~~fDLV 170 (462)
....+||.+||.|.-+.++++. ..+|+++|.++.+++.|++ +.. .++.+++.++. .+...+. ....++|.|
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~----~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~--~l~~~L~~~g~~~vDgI 93 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER----GGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFR--HLKRHLAALGVERVDGI 93 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGG--GHHHHHHHTTCSCEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC----CCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcc--hHHHHHHHcCCCCcCEE
Confidence 3479999999999999988874 3589999999999999999 765 44445554322 2221111 122468888
Q ss_pred Eec
Q 012511 171 IAS 173 (462)
Q Consensus 171 ias 173 (462)
++.
T Consensus 94 L~D 96 (285)
T 1wg8_A 94 LAD 96 (285)
T ss_dssp EEE
T ss_pred EeC
Confidence 864
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.48 E-value=0.0028 Score=68.82 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=55.1
Q ss_pred CCeEEEECCchhHHHH----HHHHh---CCC----CccEEEEEeCCHHHHHHHHHhhc-CCCC-CCceecchhHhhhhhc
Q 012511 93 PAKVLDFGAGTGSAFW----ALREV---WPR----SLEKVNLVEPSQSMQRAGQSLMQ-GPKD-LPLIHSYNSIQALNKD 159 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~----al~~~---~~~----~~~~v~~VD~S~~ml~~Ak~ll~-~~~~-~~~i~~~~~~~~l~~~ 159 (462)
...|||+|||+|.++. |.... +.. ...+|++||.|+.++...+.... +..+ +.+++.. ..++.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd--~eev~-- 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESD--MRSLP-- 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESC--GGGHH--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCc--hhhcc--
Confidence 4689999999998743 22111 000 13499999999976655444433 3333 4444432 11221
Q ss_pred cC---CCCCcccEEEecc----cccCCCCHHHHHHHHHHHHhcCCCEE
Q 012511 160 IS---KSEREHDLVIASY----VLGEVPSLQDRITIVRQLWDLTRDVL 200 (462)
Q Consensus 160 l~---~~~~~fDLVias~----vL~el~~~~~r~~~i~~Lw~~~gG~L 200 (462)
+| ...++.|+||+=. .++|+. .+.+..++++++ ++|.+
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nEL~--pe~Ld~v~r~Lk-p~Gi~ 530 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNELS--PECLDGVTGFLK-PTTIS 530 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGGSH--HHHHHTTGGGSC-TTCEE
T ss_pred cccccCCCCcccEEEEeccccccchhcc--HHHHHHHHHhCC-CCcEE
Confidence 11 1246899999743 345552 334454555554 57743
No 288
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.39 E-value=0.0021 Score=64.85 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=51.6
Q ss_pred CCCeEEEECCchhHHHHH--------HHHh---C---CCCccEEEEEeCCHHHHHHHHHhhcCCCC--CC-ceecchhHh
Q 012511 92 SPAKVLDFGAGTGSAFWA--------LREV---W---PRSLEKVNLVEPSQSMQRAGQSLMQGPKD--LP-LIHSYNSIQ 154 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~a--------l~~~---~---~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~--~~-~i~~~~~~~ 154 (462)
++.+|+|+||++|..+.. +.+. . +....+|+..|....+-...-..+..... -+ ++... .-.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gv-pgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGV-PGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEE-ESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEec-chh
Confidence 457899999999965442 2221 1 12346889999888877665555543110 11 11110 000
Q ss_pred hhhhccCCCCCcccEEEecccccCCCC
Q 012511 155 ALNKDISKSEREHDLVIASYVLGEVPS 181 (462)
Q Consensus 155 ~l~~~l~~~~~~fDLVias~vL~el~~ 181 (462)
.+.+ .++.+++|+|+++++||++..
T Consensus 130 Fy~r--lfp~~S~d~v~Ss~aLHWls~ 154 (359)
T 1m6e_X 130 FYGR--LFPRNTLHFIHSSYSLMWLSQ 154 (359)
T ss_dssp SSSC--CSCTTCBSCEEEESCTTBCSS
T ss_pred hhhc--cCCCCceEEEEehhhhhhccc
Confidence 1111 245789999999999999864
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.25 E-value=0.0018 Score=56.89 Aligned_cols=89 Identities=16% Similarity=0.155 Sum_probs=55.0
Q ss_pred CCeEEEECCchh-HHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEE
Q 012511 93 PAKVLDFGAGTG-SAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVI 171 (462)
Q Consensus 93 p~rVLDvG~G~G-~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVi 171 (462)
+.+|||+|||+| ..+..+++. ...+|+++|+|+..++ ++.. ++-......-..||||-
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~---~g~~V~atDInp~Av~-------------~v~d-----DiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH---SKVDLVLTDIKPSHGG-------------IVRD-----DITSPRMEIYRGAALIY 94 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH---SCCEEEEECSSCSSTT-------------EECC-----CSSSCCHHHHTTEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHh---CCCeEEEEECCccccc-------------eEEc-----cCCCCcccccCCcCEEE
Confidence 479999999999 577777653 2458999999998765 1111 11000000113799997
Q ss_pred ecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCCCchH
Q 012511 172 ASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSS 212 (462)
Q Consensus 172 as~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp~Gf~ 212 (462)
+-+---|| ...+..|.++.+.-|+| +|.|++
T Consensus 95 sirPP~El------~~~i~~lA~~v~adliI----~pL~~E 125 (153)
T 2k4m_A 95 SIRPPAEI------HSSLMRVADAVGARLII----KPLTGE 125 (153)
T ss_dssp EESCCTTT------HHHHHHHHHHHTCEEEE----ECBTTB
T ss_pred EcCCCHHH------HHHHHHHHHHcCCCEEE----EcCCCC
Confidence 76644444 33555666666778887 555554
No 290
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.66 E-value=0.0022 Score=79.45 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=52.1
Q ss_pred CCeEEEECCchhHHHHHHHHhCCC---CccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPR---SLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~---~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDL 169 (462)
..+||++|+|+|..+..+.+.+.. ...+|+..|+|+.+.+.|++.++... + .... + +.....++....||+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d-i--~~~~--~-d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH-V--TQGQ--W-DPANPAPGSLGKADL 1314 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT-E--EEEC--C-CSSCCCC-----CCE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc-c--cccc--c-cccccccCCCCceeE
Confidence 369999999999766655555432 14589999999887766665443210 0 0000 0 000000113457999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEec
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEP 205 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEp 205 (462)
||++++||-.++....+..++++++ |||+|++.|.
T Consensus 1315 via~~vl~~t~~~~~~l~~~~~lL~-p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAVAVGNMAATLK-EGGFLLLHTL 1349 (2512)
T ss_dssp EEEECC---------------------CCEEEEEEC
T ss_pred EEEcccccccccHHHHHHHHHHhcC-CCcEEEEEec
Confidence 9999999987777777777888886 7999999986
No 291
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.58 E-value=0.069 Score=53.12 Aligned_cols=111 Identities=11% Similarity=0.158 Sum_probs=73.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCC-----------------------CCCCceec
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGP-----------------------KDLPLIHS 149 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~-----------------------~~~~~i~~ 149 (462)
...|+.+|||..+..|.+....+ ...++=||. +++++.-+.++... .+...+..
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCT--TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CcEEEEeCCCCccHHHHhcCcCC--CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 47899999999999998876443 357788888 77777766665432 11111211
Q ss_pred c----hhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc-CCCEEEEEecCCC
Q 012511 150 Y----NSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL-TRDVLVLVEPGTP 208 (462)
Q Consensus 150 ~----~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~-~gG~LVlVEpGtp 208 (462)
. .+...+-.... ......++|+--+|.+|+ +++...+++.+.+. ++|.+|+.|.-.|
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~-~~~~~~ll~~ia~~~~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYMH-NNESQLLINTIMSKFSHGLWISYDPIGG 236 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHCSSEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCC-HHHHHHHHHHHHhhCCCcEEEEEeccCC
Confidence 1 11111111222 334678999999999996 77778888888765 7889998997655
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=95.51 E-value=0.015 Score=56.81 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=28.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHH
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSM 130 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~m 130 (462)
+..+|||+||+||..+..+.+..+ ...|.++|.+..+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g--v~sV~Gvdlg~~~ 117 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE--VMSVKGYTLGIEG 117 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT--EEEEEEECCCCTT
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC--CceeeeEEecccc
Confidence 347999999999999998886432 4578899987543
No 293
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.40 E-value=0.034 Score=53.11 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=38.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
....|||..||+|+.+.++... ..+++++|.++.+.+.|++.++.
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~----gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL----GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCHHHHHHHHc----CCeEEEEeCCHHHHHHHHHHHHh
Confidence 3579999999999999888773 46899999999999999988764
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.05 E-value=0.064 Score=54.26 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=39.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
.|++||=+|.|.|..+..+.+ ++ ..++++||+++.+++.+++-+..
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~--~~~V~~VEIDp~VVe~ar~yfp~ 250 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LK--PKMVTMVEIDQMVIDGCKKYMRK 250 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TC--CSEEEEEESCHHHHHHHHHHCCC
T ss_pred CCCeEEEECCCcHHHHHHHHh-cC--CceeEEEccCHHHHHHHHhhchh
Confidence 578999999999999988876 34 36899999999999999987643
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.87 E-value=0.093 Score=55.50 Aligned_cols=126 Identities=18% Similarity=0.178 Sum_probs=71.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCC-----------ccEEEEEeCCHHHHHHHHHhh--cCCCCCCceecchhHhhhhh
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRS-----------LEKVNLVEPSQSMQRAGQSLM--QGPKDLPLIHSYNSIQALNK 158 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~-----------~~~v~~VD~S~~ml~~Ak~ll--~~~~~~~~i~~~~~~~~l~~ 158 (462)
.+.+|+|-.||+|.++.++.+.+... ...++|+|.++.+..+|+..+ .+... +.+....+ +..
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~-~~I~~~dt---L~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENS---LRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-CEEECSCT---TCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-cccccccc---ccC
Confidence 34699999999999998877654221 146999999999999988643 33221 11211111 111
Q ss_pred cc--CCCCCcccEEEecccccCC-------------CCHHHHHHHHHHHH---hc------CCCEEEEEecCC---CCch
Q 012511 159 DI--SKSEREHDLVIASYVLGEV-------------PSLQDRITIVRQLW---DL------TRDVLVLVEPGT---PQGS 211 (462)
Q Consensus 159 ~l--~~~~~~fDLVias~vL~el-------------~~~~~r~~~i~~Lw---~~------~gG~LVlVEpGt---p~Gf 211 (462)
.. .....+||+||++-=.+.- +....-..++..++ +. +||.+.+|=|.. ..|.
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~ 372 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGI 372 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTH
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccch
Confidence 00 1124579999997443211 11111122333332 21 589998887743 2232
Q ss_pred HHHHHHHHHHHH
Q 012511 212 SIISQMRSHILW 223 (462)
Q Consensus 212 ~~I~~aR~~lL~ 223 (462)
+ ..+|+.|++
T Consensus 373 ~--~~iRk~Lle 382 (530)
T 3ufb_A 373 S--ARIKEELLK 382 (530)
T ss_dssp H--HHHHHHHHH
T ss_pred H--HHHHHHHhh
Confidence 2 457999985
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.03 E-value=0.17 Score=49.16 Aligned_cols=104 Identities=8% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCCeEEEECCchhHHHHHHHHhCCC---CccEEEEEeCCHH--------------------------HHHHHHHhhcCC
Q 012511 91 FSPAKVLDFGAGTGSAFWALREVWPR---SLEKVNLVEPSQS--------------------------MQRAGQSLMQGP 141 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~~~al~~~~~~---~~~~v~~VD~S~~--------------------------ml~~Ak~ll~~~ 141 (462)
..|..||++|+..|..++.++...+. ...+++++|..+. +++.+++.++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 35789999999999777666554321 2467999996421 355666666543
Q ss_pred C----CCCceecchhHhhhhhccCC-CCCcccEEEecccccCCCCHHHHHHHHHHHHhc--CCCEEEEEec
Q 012511 142 K----DLPLIHSYNSIQALNKDISK-SEREHDLVIASYVLGEVPSLQDRITIVRQLWDL--TRDVLVLVEP 205 (462)
Q Consensus 142 ~----~~~~i~~~~~~~~l~~~l~~-~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~--~gG~LVlVEp 205 (462)
+ ++.++... ..+.++. ...+||+|..--- ..+.-...+..++.+ +||++|+ +.
T Consensus 185 gl~~~~I~li~Gd-----a~etL~~~~~~~~d~vfIDaD-----~y~~~~~~Le~~~p~L~pGGiIv~-DD 244 (282)
T 2wk1_A 185 DLLDEQVRFLPGW-----FKDTLPTAPIDTLAVLRMDGD-----LYESTWDTLTNLYPKVSVGGYVIV-DD 244 (282)
T ss_dssp TCCSTTEEEEESC-----HHHHSTTCCCCCEEEEEECCC-----SHHHHHHHHHHHGGGEEEEEEEEE-SS
T ss_pred CCCcCceEEEEeC-----HHHHHhhCCCCCEEEEEEcCC-----ccccHHHHHHHHHhhcCCCEEEEE-cC
Confidence 2 22233322 2223332 2468999886531 122234556666655 5665554 44
No 297
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.87 E-value=0.45 Score=46.66 Aligned_cols=112 Identities=14% Similarity=0.138 Sum_probs=72.6
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC-----CCCceecch--hH-hhhhhccCCCC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK-----DLPLIHSYN--SI-QALNKDISKSE 164 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~-----~~~~i~~~~--~~-~~l~~~l~~~~ 164 (462)
+..|+++|||-=|..+.+. |+. ...|+-|| -+.+++..+.++.+.. +..++.... .+ ..+... ....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~-~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~-g~d~ 177 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPT-GTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSA-GFDP 177 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCT-TCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHT-TCCT
T ss_pred CCeEEEeCCCCCchhhhcc--CCC-CcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhc-cCCC
Confidence 4689999999877766654 442 46889999 5999999888886321 111222110 11 111110 0122
Q ss_pred CcccEEEecccccCCCCHHHHHHHHHHHHhc-CCCEEEEEecCCCCc
Q 012511 165 REHDLVIASYVLGEVPSLQDRITIVRQLWDL-TRDVLVLVEPGTPQG 210 (462)
Q Consensus 165 ~~fDLVias~vL~el~~~~~r~~~i~~Lw~~-~gG~LVlVEpGtp~G 210 (462)
...-++++--+|++|+ +++...+++.+.+. +.|..|++|..++.+
T Consensus 178 ~~Pt~~i~Egvl~Yl~-~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~ 223 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLP-ATAQDGLFTEIGGLSAVGSRIAVETSPLHG 223 (310)
T ss_dssp TSCEEEEECSCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEECCCTTC
T ss_pred CCCEEEEEechHhhCC-HHHHHHHHHHHHHhCCCCeEEEEEecCCCC
Confidence 3456889999999997 66778888888875 467777889877753
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.35 E-value=0.21 Score=49.71 Aligned_cols=56 Identities=11% Similarity=0.012 Sum_probs=43.7
Q ss_pred HHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHH
Q 012511 80 VLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 80 vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ 136 (462)
.|.|+...+....+..++|..||.|.-+.++++..+ ...+|+++|.++.+++.|+.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg-~~GrVig~D~Dp~Al~~A~r 100 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLG-EEGRLLAIDRDPQAIAVAKT 100 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCC-TTCEEEEEESCHHHHHHHTT
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHh
Confidence 456666555433457999999999999999888765 24689999999999999964
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=92.44 E-value=0.25 Score=49.52 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=41.8
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceec
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHS 149 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~ 149 (462)
...|||+|.|+|+.+.++++... ..++++||+...++...+.++ ...++.+++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~--~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~ 112 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC--PRQYSLLEKRSSLYKFLNAKF-EGSPLQILKR 112 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC--CSEEEEECCCHHHHHHHHHHT-TTSSCEEECS
T ss_pred CCEEEEECCCCCHHHHHHHhhCC--CCEEEEEecCHHHHHHHHHhc-cCCCEEEEEC
Confidence 47899999999999999987421 357999999999999888876 3344544443
No 300
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.41 E-value=0.95 Score=45.80 Aligned_cols=85 Identities=18% Similarity=0.316 Sum_probs=53.0
Q ss_pred HHCCCCCCCeEEEECCchhHHHHHHHHhCCC-----CccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhcc
Q 012511 86 RRLPGFSPAKVLDFGAGTGSAFWALREVWPR-----SLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDI 160 (462)
Q Consensus 86 ~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~-----~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l 160 (462)
..++...+..|+|+|+|.|+++.-+...+.. ...+|+.||.|+.+.+.=++.+.... + +. +...+. .+
T Consensus 74 ~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~--~-v~---W~~~l~-~l 146 (387)
T 1zkd_A 74 KAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIR--N-IH---WHDSFE-DV 146 (387)
T ss_dssp HHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCS--S-EE---EESSGG-GS
T ss_pred HHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCC--C-eE---EeCChh-hc
Confidence 3344334568999999999988766654421 13489999999999887666665432 1 11 111121 13
Q ss_pred CCCCCcccEEEecccccCCC
Q 012511 161 SKSEREHDLVIASYVLGEVP 180 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~ 180 (462)
+. ..=+||++-+|.-||
T Consensus 147 p~---~~~~viANE~fDAlP 163 (387)
T 1zkd_A 147 PE---GPAVILANEYFDVLP 163 (387)
T ss_dssp CC---SSEEEEEESSGGGSC
T ss_pred CC---CCeEEEeccccccCc
Confidence 21 234778888887777
No 301
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=90.37 E-value=0.29 Score=46.31 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=33.5
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHH
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQS 129 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ 129 (462)
|.++.++..-....+|||+||+||..+-.++..- ...+|.++|....
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~--g~~~V~avdvG~~ 113 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLK--KVTEVRGYTKGGP 113 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTST--TEEEEEEECCCST
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhc--CCCEEEEEecCCC
Confidence 5566666532344799999999999888666543 3568999997653
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=89.70 E-value=0.28 Score=47.82 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=32.7
Q ss_pred HHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHH
Q 012511 81 LCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQS 129 (462)
Q Consensus 81 L~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ 129 (462)
|.++.++..-....+|||+||+||..+-.++..- ....|.++|....
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~--gv~~V~avdvG~~ 129 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQK--RVQEVRGYTKGGP 129 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCT--TEEEEEEECCCST
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhc--CCCEEEEEEcCCC
Confidence 4555555333344699999999999887555533 3568999997654
No 303
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.79 E-value=1 Score=44.27 Aligned_cols=47 Identities=13% Similarity=-0.021 Sum_probs=40.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPK 142 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~ 142 (462)
.+..|||.=||+||.+.++... ..+++++|+++.+.+.++..++...
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~----gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE----SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHHHHHc----CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 4579999999999999888763 4689999999999999999887643
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.71 E-value=1.5 Score=42.47 Aligned_cols=125 Identities=11% Similarity=0.116 Sum_probs=72.4
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCcee
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIH 148 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~ 148 (462)
.+|...+..+.++..+ .+..+||+=+|+|.....+.. ...+++.||.++...+.-+++++......++.
T Consensus 75 ~~p~~l~~yf~~l~~~-------n~~~~LDlfaGSGaLgiEaLS----~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~ 143 (283)
T 2oo3_A 75 NLPSLFLEYISVIKQI-------NLNSTLSYYPGSPYFAINQLR----SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNH 143 (283)
T ss_dssp GSCGGGHHHHHHHHHH-------SSSSSCCEEECHHHHHHHHSC----TTSEEEEECCSHHHHHHHTTSCCTTSCEEEEC
T ss_pred CCcHHHHHHHHHHHHh-------cCCCceeEeCCcHHHHHHHcC----CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEe
Confidence 3566555555555542 346799999999988876654 24799999999999888777775432222222
Q ss_pred cchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHH-HHHHHhcCCCEEEEEecC
Q 012511 149 SYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITI-VRQLWDLTRDVLVLVEPG 206 (462)
Q Consensus 149 ~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~-i~~Lw~~~gG~LVlVEpG 206 (462)
. +....+....+ ...+||+|++-=-...-.......+. .+..++-++|.++|==|-
T Consensus 144 ~-D~~~~L~~l~~-~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 144 T-DGVSKLNALLP-PPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp S-CHHHHHHHHCS-CTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred C-cHHHHHHHhcC-CCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 2 11122322222 33579999984322211112333333 333444478988886553
No 305
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=86.13 E-value=0.58 Score=46.93 Aligned_cols=46 Identities=22% Similarity=0.124 Sum_probs=36.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~ 139 (462)
.+.+|||+.||||.=+.++++... ...++++|.|+.-++..+++++
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~--~~~l~A~D~~~~R~~~l~~~l~ 193 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGC--CRNLAANDLSPSRIARLQKILH 193 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTC--EEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHhcC--CCcEEEEcCCHHHHHHHHHHHH
Confidence 346999999999987777777543 4579999999998887777665
No 306
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=84.10 E-value=0.58 Score=44.67 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=25.0
Q ss_pred HHHHHHHCCCCCC-CeEEEECCchhHHHHHHHHh
Q 012511 81 LCEVRRRLPGFSP-AKVLDFGAGTGSAFWALREV 113 (462)
Q Consensus 81 L~eL~~rlp~~~p-~rVLDvG~G~G~~~~al~~~ 113 (462)
|.||.++. -++| .+|||+||+||..+..+++.
T Consensus 62 L~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 62 LRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred HHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 56777775 5555 69999999999988777763
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=83.72 E-value=2.9 Score=41.16 Aligned_cols=74 Identities=19% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEe
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIA 172 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVia 172 (462)
..+|||+-||.|.+..++... ....+.++|.++..++..+..+.... .. ++..-.+..-..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a---G~~~v~~~e~d~~a~~t~~~N~~~~~-----~~-----Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC---GAECVYSNEWDKYAQEVYEMNFGEKP-----EG-----DITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---TCEEEEEECCCHHHHHHHHHHHSCCC-----BS-----CGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC---CCeEEEEEeCCHHHHHHHHHHcCCCC-----cC-----CHHHcCHhhCCCCCEEEE
Confidence 479999999999998888763 35678899999999998888775432 11 111101111235899998
Q ss_pred cccccCC
Q 012511 173 SYVLGEV 179 (462)
Q Consensus 173 s~vL~el 179 (462)
+.-...+
T Consensus 78 gpPCQ~f 84 (327)
T 2c7p_A 78 GFPCQAF 84 (327)
T ss_dssp ECCCTTT
T ss_pred CCCCCCc
Confidence 7544333
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=83.70 E-value=1.7 Score=44.21 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=37.9
Q ss_pred CCCeEEEECCchhHHHHHHH-HhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALR-EVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~-~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+...|+|+||+.|..+..++ ...+ ...+|+++|+++...+..+..+..
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~-~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKG-KFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTS-CCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcC-CCCEEEEEcCCHHHHHHHHHHHHh
Confidence 34799999999998887665 4443 246899999999999888877654
No 309
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=81.83 E-value=2 Score=42.20 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=37.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCH---HHHHHHHHhhcCCC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQ---SMQRAGQSLMQGPK 142 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~---~ml~~Ak~ll~~~~ 142 (462)
....|||.=||+||.+.++... ..+++++|+++ .+.+.+++.++...
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~----~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE----GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH----TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCEEEecCCCCCHHHHHHHHc----CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3579999999999999888874 46899999999 99999998886543
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=76.82 E-value=7.5 Score=38.76 Aligned_cols=65 Identities=11% Similarity=-0.009 Sum_probs=44.8
Q ss_pred HhcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 67 ASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 67 a~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
+..++-.+...+..|. +.......+||-+|+|+ |.++..++..++ ..+|+++|.|++.++.++++
T Consensus 164 aa~l~~~~~ta~~al~----~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 229 (398)
T 2dph_A 164 LTLISDILPTGFHGCV----SAGVKPGSHVYIAGAGPVGRCAAAGARLLG--AACVIVGDQNPERLKLLSDA 229 (398)
T ss_dssp HTTTTTHHHHHHHHHH----HTTCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHTT
T ss_pred hhhhcCHHHHHHHHHH----HcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHc
Confidence 3455556666666652 22222457999999986 777777777654 34899999999988888753
No 311
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=75.40 E-value=5.2 Score=40.91 Aligned_cols=47 Identities=23% Similarity=0.389 Sum_probs=35.8
Q ss_pred CCeEEEECCchhHHHHHHHHhCC---CCccEEEEEeCCHHHHHHHHHhhc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWP---RSLEKVNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~---~~~~~v~~VD~S~~ml~~Ak~ll~ 139 (462)
+.+|+|+|+|.|+++..+...+. ....+|+.||.|+.+.+.=++.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 46999999999998776555432 123589999999999877666664
No 312
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=75.16 E-value=20 Score=34.99 Aligned_cols=44 Identities=14% Similarity=0.075 Sum_probs=35.2
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.+.+||=+|+|+ |.++..++..++ ...|+++|.|++-++.++++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh
Confidence 457899999985 777777777665 23599999999999999987
No 313
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=72.85 E-value=17 Score=36.10 Aligned_cols=65 Identities=14% Similarity=0.029 Sum_probs=45.1
Q ss_pred HhcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 67 ASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 67 a~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
+..++-.+...+..|. +.......+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 164 aa~l~~~~~ta~~al~----~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G--a~~Vi~~~~~~~~~~~a~~l 229 (398)
T 1kol_A 164 LTCLSDILPTGYHGAV----TAGVGPGSTVYVAGAGPVGLAAAASARLLG--AAVVIVGDLNPARLAHAKAQ 229 (398)
T ss_dssp HGGGGTHHHHHHHHHH----HTTCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHT
T ss_pred ccccccHHHHHHHHHH----HcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHc
Confidence 3455555666666653 22222457999999985 777777777664 34799999999999888764
No 314
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=71.32 E-value=2.8 Score=40.88 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=24.4
Q ss_pred CCCeEEEECC------chhHHHHHHHHhCCCCccEEEEEeCCH
Q 012511 92 SPAKVLDFGA------GTGSAFWALREVWPRSLEKVNLVEPSQ 128 (462)
Q Consensus 92 ~p~rVLDvG~------G~G~~~~al~~~~~~~~~~v~~VD~S~ 128 (462)
-..+|||+|+ -||+ |.+....+ ....++++|+.+
T Consensus 109 ~gmrVLDLGA~s~kg~APGS--~VLr~~~p-~g~~VVavDL~~ 148 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGT--AVLRQWLP-TGTLLVDSDLND 148 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSC-TTCEEEEEESSC
T ss_pred CCCEEEeCCCCCCCCCCCcH--HHHHHhCC-CCcEEEEeeCcc
Confidence 3589999997 5777 55555443 334899999875
No 315
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=70.41 E-value=27 Score=34.20 Aligned_cols=95 Identities=15% Similarity=0.096 Sum_probs=53.6
Q ss_pred CCeEEEEC-Cch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecc-hhHhhhhhccCCCCCcccE
Q 012511 93 PAKVLDFG-AGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSY-NSIQALNKDISKSEREHDL 169 (462)
Q Consensus 93 p~rVLDvG-~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~-~~~~~l~~~l~~~~~~fDL 169 (462)
+.+||=+| +|+ |.++..++..+. ..+|++++.+++-++.++++=.+ ..+... .....+.. + ..+.+|+
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~v~~-~--~~~g~Dv 242 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRT--DLTVIATASRPETQEWVKSLGAH----HVIDHSKPLAAEVAA-L--GLGAPAF 242 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHTTCS----EEECTTSCHHHHHHT-T--CSCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHcCCC----EEEeCCCCHHHHHHH-h--cCCCceE
Confidence 46899999 663 666666776542 35899999999988888764211 111100 00111211 1 3357999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012511 170 VIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLV 203 (462)
Q Consensus 170 Vias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlV 203 (462)
|+-+-. ........-++++ ++|.+|++
T Consensus 243 vid~~g------~~~~~~~~~~~l~-~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------TDKHAAEIADLIA-PQGRFCLI 269 (363)
T ss_dssp EEECSC------HHHHHHHHHHHSC-TTCEEEEC
T ss_pred EEECCC------chhhHHHHHHHhc-CCCEEEEE
Confidence 885421 2222222223333 69999988
No 316
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=69.61 E-value=50 Score=32.35 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=69.0
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC------------------------CCCCCcee
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG------------------------PKDLPLIH 148 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~------------------------~~~~~~i~ 148 (462)
...|+-+|||-=+-.|.+...-. ....++=||.-+-+....+.+.+. ..+...+.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~-~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDL-LSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTC-CCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCC-CCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 46899999999888888775211 235788888855544333322210 01111111
Q ss_pred cch-hHhhhhhcc---CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc-CCCEEEEEecCCCC
Q 012511 149 SYN-SIQALNKDI---SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL-TRDVLVLVEPGTPQ 209 (462)
Q Consensus 149 ~~~-~~~~l~~~l---~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~-~gG~LVlVEpGtp~ 209 (462)
... ....+...+ .......-++|+--+|.+|+ +++...+|+.+.+. ++|.+|+.|+-.|.
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~-~~~~~~ll~~ia~~f~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMT-PEQSANLLKWAANSFERAMFINYEQVNMG 234 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHCSSEEEEEEEECCTT
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCC-HHHHHHHHHHHHHhCCCceEEEEeccCCC
Confidence 110 001111111 12234556899999999996 78888888888765 78999999987664
No 317
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=69.12 E-value=6.3 Score=38.82 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=37.2
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+.+|||+-||.|.+...+... +-....+.++|.++.+++..+.++.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~~ 48 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFPH 48 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CCeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhccc
Confidence 468999999999998887763 10134789999999999998887654
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=68.11 E-value=16 Score=35.51 Aligned_cols=64 Identities=11% Similarity=-0.029 Sum_probs=43.2
Q ss_pred hcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 68 SRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 68 ~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
..++..+...+..+. +.....+.+||=+|+|+ |.++..++...+ ..+|+++|.+++-++.++++
T Consensus 146 a~~~~~~~ta~~al~----~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 146 VMIPDMMTTGFHGAE----LANIKLGDTVCVIGIGPVGLMSVAGANHLG--AGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp TTTTTHHHHHHHHHH----HTTCCTTCCEEEECCSHHHHHHHHHHHTTT--CSSEEEECCCHHHHHHHHHH
T ss_pred hhccchhHHHHHHHH----hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CcEEEEECCCHHHHHHHHHh
Confidence 334455555555552 22223457999999985 666777777554 24799999999988888775
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=66.98 E-value=22 Score=34.26 Aligned_cols=62 Identities=15% Similarity=0.051 Sum_probs=43.2
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++..+...+..|.. .......+||-+|+|+ |.++..++...+ .+|+++|.|++-++.++++
T Consensus 147 ~l~~~~~ta~~~l~~----~~~~~g~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 147 PILCAGVTVYKGLKV----TDTRPGQWVVISGIGGLGHVAVQYARAMG---LRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp GGGTHHHHHHHHHHT----TTCCTTSEEEEECCSTTHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHT
T ss_pred cccchhHHHHHHHHH----cCCCCCCEEEEECCCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHc
Confidence 345555555555522 2223457999999985 777777777664 3899999999998888764
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=65.63 E-value=17 Score=35.61 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=34.3
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~G--a~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCG--ASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHc
Confidence 357999999986 776767776654 23799999999999888765
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=61.22 E-value=18 Score=35.04 Aligned_cols=62 Identities=16% Similarity=0.047 Sum_probs=42.7
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++-.+...+..|... ....+.+||-+|+|+ |.++..++..++ .+|++++.|++-++.++++
T Consensus 157 ~l~~~~~ta~~~l~~~----~~~~g~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 157 PLLCAGITTYSPLKFS----KVTKGTKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp GGGTHHHHHHHHHHHT----TCCTTCEEEEESCSHHHHHHHHHHHHTT---CEEEEECSSSTTHHHHHHT
T ss_pred hhhhhHHHHHHHHHhc----CCCCCCEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHhc
Confidence 4455555555555432 223457999999985 776777777664 3899999999988888763
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=60.13 E-value=51 Score=35.36 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=69.1
Q ss_pred CCeEEEECCchhHHHHHHHHh-------CCCCccEEEEEeCCHHHHHHHHHhhcCC------------C-----------
Q 012511 93 PAKVLDFGAGTGSAFWALREV-------WPRSLEKVNLVEPSQSMQRAGQSLMQGP------------K----------- 142 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~-------~~~~~~~v~~VD~S~~ml~~Ak~ll~~~------------~----------- 142 (462)
...|+-+|||-=+..|.+... |+ ....++=||.-+-+....+.+.+.. .
T Consensus 108 ~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~-~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 108 KIVVVNLGCGYDPLPFQLLDTNNIQSQQYH-DRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp EEEEEEETCTTCCHHHHHHCTTCGGGGGGS-SSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CcEEEEcccccCcceeeeeccCcccccccC-CCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 468999999998888888654 43 2456777887766555544432110 0
Q ss_pred --CCCceecch-hHhhhhhcc---CC-CCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 143 --DLPLIHSYN-SIQALNKDI---SK-SEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 143 --~~~~i~~~~-~~~~l~~~l---~~-~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
+...+.... ....+...+ .. .....-|+|+--+|.+|+ +++...+|+.+-+.+++.+|+.|.-.|
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~-~~~~~~ll~~~~~~~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMK-PERSDSIIEATSKMENSHFIILEQLIP 258 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSC-HHHHHHHHHHHHTSSSEEEEEEEECCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcC-HHHHHHHHHHHhhCCCceEEEEEeecC
Confidence 000111110 000111111 11 233456889999999996 777788888887667889999897666
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.73 E-value=28 Score=33.83 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=34.2
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh
Confidence 457999999985 666777777664 24899999999988888764
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=56.64 E-value=22 Score=34.33 Aligned_cols=65 Identities=12% Similarity=0.094 Sum_probs=43.9
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++-.+...+..|......+ ....+||=+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 150 ~l~~~~~ta~~~l~~~~~~~--~~g~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 150 PLTDAGLTPYHAISRVLPLL--GPGSTAVVIGVGGLGHVGIQILRAVS--AARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp GGGTTTHHHHHHHHTTGGGC--CTTCEEEEECCSHHHHHHHHHHHHHC--CCEEEEEESCHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHHhccCC--CCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHc
Confidence 45555666666665421111 2357999999985 666666776553 35899999999998888764
No 325
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=55.92 E-value=37 Score=33.34 Aligned_cols=62 Identities=19% Similarity=0.106 Sum_probs=41.6
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++..+...+..|... ......+||-+|+|+ |.++..++..++ .+|++++.|++-++.++++
T Consensus 175 ~l~~~~~tA~~al~~~----~~~~g~~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~~~~~~~~~a~~l 237 (369)
T 1uuf_A 175 PLLCAGITTYSPLRHW----QAGPGKKVGVVGIGGLGHMGIKLAHAMG---AHVVAFTTSEAKREAAKAL 237 (369)
T ss_dssp GGGTHHHHHHHHHHHT----TCCTTCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHH
T ss_pred hhhhhHHHHHHHHHhc----CCCCCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHc
Confidence 3444555555555432 222357999999985 666666776654 3699999999988888763
No 326
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=52.87 E-value=31 Score=33.57 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=40.3
Q ss_pred CchhHHHHHHHHHHHHHHCC--CCCCCeEEEECCch-hHHH-HHHH-HhCCCCccEEEEEeCCHH---HHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLP--GFSPAKVLDFGAGT-GSAF-WALR-EVWPRSLEKVNLVEPSQS---MQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp--~~~p~rVLDvG~G~-G~~~-~al~-~~~~~~~~~v~~VD~S~~---ml~~Ak~l 137 (462)
++..+...+..|....-+-+ .|.+.+||-+|+|+ |.++ ..++ ..++ ..+|++++.+++ -++.++++
T Consensus 148 l~~~~~ta~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G--a~~Vi~~~~~~~~~~~~~~~~~l 221 (357)
T 2b5w_A 148 LIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG--YENLYCLGRRDRPDPTIDIIEEL 221 (357)
T ss_dssp GHHHHHHHHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC--CCEEEEEECCCSSCHHHHHHHHT
T ss_pred hhchHHHHHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC--CcEEEEEeCCcccHHHHHHHHHc
Confidence 34445555555533222211 13448999999964 5656 6666 5554 234999999987 77777653
No 327
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=51.93 E-value=42 Score=32.88 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=34.5
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||=+|+|+ |.++..++..++ ..+|+++|.+++-++.++++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAG--ATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHc
Confidence 357999999985 666667777664 34899999999998888875
No 328
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=50.32 E-value=25 Score=35.09 Aligned_cols=79 Identities=13% Similarity=0.057 Sum_probs=49.1
Q ss_pred CeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcCCCCCCceecc-hh--HhhhhhccCCCCCcccEE
Q 012511 94 AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSY-NS--IQALNKDISKSEREHDLV 170 (462)
Q Consensus 94 ~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~-~~--~~~l~~~l~~~~~~fDLV 170 (462)
.+|||+-||.|.+...+... ...-+.++|.++...+..+..+.+. ..+... .. ...+.... .....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a---G~~~v~avE~d~~a~~t~~~N~~~~---~~~~~DI~~~~~~~~~~~~-~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA---GFDVKMAVEIDQHAINTHAINFPRS---LHVQEDVSLLNAEIIKGFF-KNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH---TCEEEEEECSCHHHHHHHHHHCTTS---EEECCCGGGCCHHHHHHHH-CSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC---CCcEEEEEeCCHHHHHHHHHhCCCC---ceEecChhhcCHHHHHhhc-ccCCCeeEE
Confidence 58999999999988887663 3456789999999998888765432 111111 00 01111000 123579999
Q ss_pred EecccccCC
Q 012511 171 IASYVLGEV 179 (462)
Q Consensus 171 ias~vL~el 179 (462)
+.+.-...+
T Consensus 76 ~ggpPCQ~f 84 (376)
T 3g7u_A 76 IGGPPCQGF 84 (376)
T ss_dssp EECCCCCTT
T ss_pred EecCCCCCc
Confidence 987654444
No 329
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=49.85 E-value=48 Score=31.94 Aligned_cols=65 Identities=8% Similarity=-0.033 Sum_probs=41.2
Q ss_pred cCchhHHHHHHHHHHHHH-HCCCCCCCeEEEECCch-hHHHHHHHHhC--CCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRR-RLPGFSPAKVLDFGAGT-GSAFWALREVW--PRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~-rlp~~~p~rVLDvG~G~-G~~~~al~~~~--~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++-.+...+..|..... +... ...+||-+|+|+ |..+..++..+ + .+|++++.|++-++.++++
T Consensus 147 ~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~G---a~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 147 PLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKN---ITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTT---CEEEEECSCHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCC---CEEEEEeCCHHHHHHHHHh
Confidence 344444444555543310 0012 457999999974 66566666655 4 4799999999988888764
No 330
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=49.53 E-value=72 Score=30.60 Aligned_cols=62 Identities=15% Similarity=0.072 Sum_probs=41.4
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++..+...+..|... .+ ....+||-+|+|+ |..+..++..++ .+|++++.|++-++.++++
T Consensus 145 ~l~~~~~ta~~~l~~~--~~--~~g~~VlV~GaG~vG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~l 207 (339)
T 1rjw_A 145 PIFCAGVTTYKALKVT--GA--KPGEWVAIYGIGGLGHVAVQYAKAMG---LNVVAVDIGDEKLELAKEL 207 (339)
T ss_dssp GGGTHHHHHHHHHHHH--TC--CTTCEEEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHhc--CC--CCCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHC
Confidence 3444555555555443 22 2357999999974 666666666554 4899999999988888753
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=49.51 E-value=30 Score=33.79 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=41.5
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++..+...+..|.+ +.......+||=+|+|+ |.++..++..++ .+|++++.+++-++.++++
T Consensus 170 l~~~~~ta~~al~~---~~~~~~g~~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 170 LPCAGLTAWFALVE---KGHLRAGDRVVVQGTGGVALFGLQIAKATG---AEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp TTTHHHHHHHHHTT---TTCCCTTCEEEEESSBHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHH---hcCCCCCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEecCchhHHHHHHc
Confidence 44455454444422 22222457999999885 666666777664 4899999999988888764
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.10 E-value=31 Score=34.23 Aligned_cols=44 Identities=30% Similarity=0.308 Sum_probs=34.3
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||=+|+|+ |.++..++..++ ..+|+++|.+++-++.++++
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAG--ASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHc
Confidence 457999999984 666666777654 34899999999999888875
No 333
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=48.54 E-value=39 Score=32.83 Aligned_cols=62 Identities=15% Similarity=0.034 Sum_probs=41.2
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++..+...+..|.. .......+||-+|+|+ |..+..++..++ .+|++++.|++-++.++++
T Consensus 160 ~l~~~~~ta~~~l~~----~~~~~g~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~~~~~~~~~~~l 222 (360)
T 1piw_A 160 PLLCGGLTVYSPLVR----NGCGPGKKVGIVGLGGIGSMGTLISKAMG---AETYVISRSSRKREDAMKM 222 (360)
T ss_dssp GGGTHHHHHHHHHHH----TTCSTTCEEEEECCSHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHHH
T ss_pred hhhhhHHHHHHHHHH----cCCCCCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHc
Confidence 345555555555543 2222457999999974 666666666554 3699999999888888763
No 334
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=48.37 E-value=48 Score=29.13 Aligned_cols=53 Identities=21% Similarity=0.336 Sum_probs=37.2
Q ss_pred HhcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHHHHHHHHhCCCCccEEEEEeC
Q 012511 67 ASRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEP 126 (462)
Q Consensus 67 a~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~ 126 (462)
..||-+..+ .|+.......+ -+.-|||+|-|.|...-.+.+.+|+ .++.++|.
T Consensus 20 irRltaQR~----~L~~a~~~v~~-~~GpVlElGLGNGRTydHLRe~~P~--R~I~vfDR 72 (174)
T 3iht_A 20 IDRMVSQRA----CLEHAIAQTAG-LSGPVYELGLGNGRTYHHLRQHVQG--REIYVFER 72 (174)
T ss_dssp HHHHHHHHH----HHHHHHHHTTT-CCSCEEEECCTTCHHHHHHHHHCCS--SCEEEEES
T ss_pred HHHHHHHHH----HHHHHHHHhcC-CCCceEEecCCCChhHHHHHHhCCC--CcEEEEEe
Confidence 445544444 44444444433 3467999999999999999999984 57999994
No 335
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=48.20 E-value=70 Score=30.82 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=33.2
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |..+..++..++ .+|+++|.|++-++.++++
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l 211 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYG---AFVVCTARSPRRLEVAKNC 211 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEcCCHHHHHHHHHh
Confidence 357999999984 666666776654 3599999999988888764
No 336
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=46.90 E-value=20 Score=38.39 Aligned_cols=41 Identities=20% Similarity=0.140 Sum_probs=30.8
Q ss_pred CCeEEEECCchhHHHHHHHHhCC----------CCccEEEEEeC---CHHHHHH
Q 012511 93 PAKVLDFGAGTGSAFWALREVWP----------RSLEKVNLVEP---SQSMQRA 133 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~----------~~~~~v~~VD~---S~~ml~~ 133 (462)
.-+|||+|.|+|..++++.+.|. .....|+.+|. +.+.+..
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~ 120 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLAL 120 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHH
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHH
Confidence 35999999999988887777662 12357999998 7766653
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=46.73 E-value=45 Score=32.55 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=33.7
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 239 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKAL 239 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHh
Confidence 357999999984 666667777664 34799999999988888754
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=45.68 E-value=81 Score=30.85 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHCC-CCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 73 VYSACYRVLCEVRRRLP-GFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 73 ~Ya~~~~vL~eL~~rlp-~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.+...+..|.. .. .....+||-+|+|+ |.++..++..++ ..+|++++.|++-++.++++
T Consensus 179 ~~~ta~~al~~----~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~l 239 (380)
T 1vj0_A 179 SGATAYHAFDE----YPESFAGKTVVIQGAGPLGLFGVVIARSLG--AENVIVIAGSPNRLKLAEEI 239 (380)
T ss_dssp HHHHHHHHHHT----CSSCCBTCEEEEECCSHHHHHHHHHHHHTT--BSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHh----cCCCCCCCEEEEECcCHHHHHHHHHHHHcC--CceEEEEcCCHHHHHHHHHc
Confidence 45555555532 22 22357999999874 666666776654 24899999999988888753
No 339
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=45.54 E-value=40 Score=32.90 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=33.4
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l 235 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIEL 235 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHc
Confidence 357999999985 666666666554 23799999999988888764
No 340
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=45.26 E-value=32 Score=33.75 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=33.6
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||=+|+|+ |.++..++...+ ..+|+++|.|++-++.++++
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~G--a~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAG--ASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHT--CSCEEEECSCTTHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHc
Confidence 457999999984 666666776654 24799999999988888754
No 341
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=45.01 E-value=50 Score=32.23 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.5
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |..+..++..++ ..+|+++|.|++-++.++++
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~l 236 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAG--AKRIIAVDLNPDKFEKAKVF 236 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHh
Confidence 357999999874 666666776654 23799999999988888754
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=44.49 E-value=51 Score=32.14 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=33.5
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |..+..++..++ ..+|+++|.|++-++.++++
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~l 235 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKEV 235 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHh
Confidence 357999999985 666666776654 23799999999988888754
No 343
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=41.63 E-value=41 Score=32.00 Aligned_cols=63 Identities=22% Similarity=0.172 Sum_probs=40.8
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCC--CeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSP--AKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p--~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++..+...+..|..+.+. . .++ .+||=+|+ | .|.++..++...+ .+|++++.|++-++.++++
T Consensus 124 l~~~~~ta~~al~~~~~~-~-~~~~~g~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~~~~~~~~~~~l 190 (324)
T 3nx4_A 124 IGTAGFTAMLCVMALEDA-G-IRPQDGEVVVTGASGGVGSTAVALLHKLG---YQVAAVSGRESTHGYLKSL 190 (324)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CCGGGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhhc-c-cCCCCCeEEEECCCcHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhc
Confidence 334444455555555432 1 222 35999997 4 4666677777664 3899999999988888764
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=41.57 E-value=52 Score=32.05 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=33.3
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|+ |.++..++..++ ..+|+++|.|++-++.++++
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHc
Confidence 357999999984 666666666554 23799999999988888764
No 345
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=40.83 E-value=44 Score=32.58 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=36.8
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccEE-EEEeCCHHHHHHHHHhhcC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEKV-NLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~v-~~VD~S~~ml~~Ak~ll~~ 140 (462)
.+.+|+|+-||.|.+..++... +-...-+ .++|.++...+..+.+...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~ 57 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE 57 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC
Confidence 3569999999999999888763 1002456 7999999999988887754
No 346
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=40.55 E-value=41 Score=32.48 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=30.5
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCC--CccEEEEEeCCHH
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPR--SLEKVNLVEPSQS 129 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~--~~~~v~~VD~S~~ 129 (462)
.+..|+=+|||+|.-+-.+++.+++ ...+.+++|+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 3469999999999999888887764 2468999998553
No 347
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=39.27 E-value=65 Score=33.23 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=35.1
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhc
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~ 139 (462)
..++||+=||.|.+...+... ...-+.++|.++...+..+....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~ 131 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHY 131 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSC
T ss_pred cceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhcc
Confidence 368999999999988887752 24558899999999888777653
No 348
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=39.26 E-value=1.2e+02 Score=28.89 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=34.1
Q ss_pred CCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 90 GFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 90 ~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+.+||=+|+|+ |.++..++..++ ...++++|.+++-++.++++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G--~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG--AKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC--CcEEEEEechHHHHHHHHHc
Confidence 33567999999985 455556666654 35689999999988888765
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=39.05 E-value=69 Score=30.82 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=38.5
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCc--hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAG--TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G--~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++..+...+..|... ......+||-+|++ .|..+..++...+ .+|++++.+++.++.++.+
T Consensus 150 ~l~~~~~ta~~~l~~~----~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~~~~~~~~~ 213 (347)
T 2hcy_A 150 PILCAGITVYKALKSA----NLMAGHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEGKEELFRSI 213 (347)
T ss_dssp GGGTHHHHHHHHHHTT----TCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTTHHHHHHHT
T ss_pred HHhhhHHHHHHHHHhc----CCCCCCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHHHHHHHHHc
Confidence 3444554455555432 22245799999984 4555555555443 4899999998888777653
No 350
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=38.06 E-value=1.4e+02 Score=23.92 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=45.6
Q ss_pred ccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc-C
Q 012511 118 LEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL-T 196 (462)
Q Consensus 118 ~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~-~ 196 (462)
..++..||-++...+..+..+........+....+.......+ ....+|+||+...+.... ..+ +++.+-+. +
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l--~~~~~dlii~D~~l~~~~-g~~---~~~~l~~~~~ 93 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLL--EKESVDIAILDVEMPVKT-GLE---VLEWIRSEKL 93 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHH--TTSCCSEEEECSSCSSSC-HHH---HHHHHHHTTC
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHh--hccCCCEEEEeCCCCCCc-HHH---HHHHHHHhCC
Confidence 4589999999999888888777543211121112222221112 235699999998877653 333 44444333 3
Q ss_pred CCEEEEEe
Q 012511 197 RDVLVLVE 204 (462)
Q Consensus 197 gG~LVlVE 204 (462)
.-.+|++-
T Consensus 94 ~~~ii~ls 101 (150)
T 4e7p_A 94 ETKVVVVT 101 (150)
T ss_dssp SCEEEEEE
T ss_pred CCeEEEEe
Confidence 44455443
No 351
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=37.91 E-value=48 Score=31.69 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=31.7
Q ss_pred CCCeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+ | .|.++..++...+ .+|++++.+++-++.++++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 192 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTDEKLKIAKEY 192 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHc
Confidence 4579999994 4 3555556666554 4899999999988888764
No 352
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=36.41 E-value=51 Score=31.24 Aligned_cols=61 Identities=18% Similarity=0.216 Sum_probs=41.1
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++-.+...+..| + +.....+.+||=+|+|+ |.++..++..++ .+|++++ |++-++.++++
T Consensus 123 ~l~~~~~ta~~al-~---~~~~~~g~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~-~~~~~~~~~~l 184 (315)
T 3goh_A 123 ALPCPLLTAWQAF-E---KIPLTKQREVLIVGFGAVNNLLTQMLNNAG---YVVDLVS-ASLSQALAAKR 184 (315)
T ss_dssp TSHHHHHHHHHHH-T---TSCCCSCCEEEEECCSHHHHHHHHHHHHHT---CEEEEEC-SSCCHHHHHHH
T ss_pred hCccHHHHHHHHH-h---hcCCCCCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEE-ChhhHHHHHHc
Confidence 3555565655555 2 22223457999999974 666777777654 3899999 88877877764
No 353
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=36.36 E-value=87 Score=29.91 Aligned_cols=45 Identities=18% Similarity=0.000 Sum_probs=31.1
Q ss_pred CCCeEEEECCchhHH-HHHHHHhCCCCccEEEEEeCCHHHHHHHHHhh
Q 012511 92 SPAKVLDFGAGTGSA-FWALREVWPRSLEKVNLVEPSQSMQRAGQSLM 138 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~-~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll 138 (462)
...+||=+|+|++.. +..++.... ..+|+++|.|++-++.++.+-
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~--g~~Vi~~~~~~~r~~~~~~~G 208 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVF--GAKVIAVDINQDKLNLAKKIG 208 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTS--CCEEEEEESCHHHHHHHHHTT
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhC--CCEEEEEECcHHHhhhhhhcC
Confidence 347999999997533 333333332 468999999999888877653
No 354
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=36.20 E-value=1.9e+02 Score=30.01 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=21.8
Q ss_pred CeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCH
Q 012511 94 AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQ 128 (462)
Q Consensus 94 ~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~ 128 (462)
.+||=+||| |.+...+..+-.....+++.+|...
T Consensus 33 ~~VlvvG~G-GlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINAT-ATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCS-HHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred CeEEEECcC-HHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 699999998 4444333332222467999999653
No 355
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=35.50 E-value=29 Score=33.77 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=22.1
Q ss_pred CCeEEEECCchhHHHHHHHHhC----CCCccEEEEEeC
Q 012511 93 PAKVLDFGAGTGSAFWALREVW----PRSLEKVNLVEP 126 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~----~~~~~~v~~VD~ 126 (462)
.-+|||+|.|+|..++++...| +.....++.+|.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek 134 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEK 134 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEES
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecH
Confidence 4689999999998765443322 222346677774
No 356
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=35.25 E-value=1.4e+02 Score=28.50 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=38.5
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCchhHH--HHHHHHhC-CCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAGTGSA--FWALREVW-PRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G~G~~--~~al~~~~-~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++-.+...+..|.. .......+||-.|+|.|.+ +..++... + .+|+++|.+++.++.++++
T Consensus 151 ~l~~~~~ta~~~l~~----~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 151 PLTCSGITTYRAVRK----ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp GGGTHHHHHHHHHHH----TTCCTTCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHh----cCCCCCCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHHHh
Confidence 344444444555432 2222457999999985544 44444443 3 4799999999988888764
No 357
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=34.27 E-value=1.4e+02 Score=28.78 Aligned_cols=43 Identities=23% Similarity=0.250 Sum_probs=32.1
Q ss_pred CCCeEEEECCch-hHHHHHHHHhC-CCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVW-PRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~-~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||=+|+|+ |.++..++..+ + .+|+++|.|++-++.++++
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~G---a~Vi~~~~~~~~~~~~~~l 230 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTP---ATVIALDVKEEKLKLAERL 230 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCC---CEEEEEESSHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHh
Confidence 357999999973 55555666655 4 3799999999988888754
No 358
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=34.07 E-value=95 Score=26.84 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=28.4
Q ss_pred CCCeEEEECCc--hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHH
Q 012511 92 SPAKVLDFGAG--TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 92 ~p~rVLDvG~G--~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ 136 (462)
...+||..|++ .|..+..++...+ .+|+++|.+++.++.++.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHT
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH
Confidence 45799999953 4544444444333 479999999988777654
No 359
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=33.81 E-value=1.2e+02 Score=29.17 Aligned_cols=44 Identities=27% Similarity=0.191 Sum_probs=32.9
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.+.+||-+|+|+ |..+..++..++ ..+|++++.+++-++.++++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG--AYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh
Confidence 567999999974 666666666554 23799999999988888754
No 360
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=33.43 E-value=1.8e+02 Score=23.97 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=46.4
Q ss_pred CccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcC
Q 012511 117 SLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLT 196 (462)
Q Consensus 117 ~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~ 196 (462)
...+|..||-++......+..+........+....+....-..+ ....+|+||+...+.... ..+ +++.+-+..
T Consensus 24 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l--~~~~~dlvilD~~l~~~~-g~~---l~~~lr~~~ 97 (164)
T 3t8y_A 24 RVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKA--IELKPDVITMDIEMPNLN-GIE---ALKLIMKKA 97 (164)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHH--HHHCCSEEEECSSCSSSC-HHH---HHHHHHHHS
T ss_pred CccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHh--ccCCCCEEEEeCCCCCCC-HHH---HHHHHHhcC
Confidence 34689999999999888888887643222221111111111111 123589999998877654 333 444443332
Q ss_pred CCEEEEEecCC
Q 012511 197 RDVLVLVEPGT 207 (462)
Q Consensus 197 gG~LVlVEpGt 207 (462)
.-.+|++-...
T Consensus 98 ~~~ii~~s~~~ 108 (164)
T 3t8y_A 98 PTRVIMVSSLT 108 (164)
T ss_dssp CCEEEEEESSC
T ss_pred CceEEEEecCC
Confidence 24455544333
No 361
>4a94_C Carboxypeptidase inhibitor; hydrolase-hydrolase inhibitor complex, CPA4, NVCI, PCI, LCI; 1.70A {Nerita versicolor}
Probab=33.26 E-value=25 Score=23.74 Aligned_cols=22 Identities=45% Similarity=1.028 Sum_probs=17.5
Q ss_pred ccCCCCCCCCCCCCCCcceeeEe
Q 012511 259 APCPHEGRCPLENSGKYCHFVQR 281 (462)
Q Consensus 259 APCpH~~~CPl~~~~~~ChF~qr 281 (462)
-||-+-+.|||.. ..-|.|.-.
T Consensus 7 rpcinpgrcplvp-datctfvck 28 (53)
T 4a94_C 7 RPCINPGRCPLVP-DATCTFVCK 28 (53)
T ss_dssp BCCSSCCCCTTST-TCEEEEEEE
T ss_pred CcccCCCcCcccc-CCeEEEEEe
Confidence 4899999999864 457888764
No 362
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=32.92 E-value=64 Score=31.45 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=35.9
Q ss_pred CCeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhhcC
Q 012511 93 PAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG 140 (462)
Q Consensus 93 p~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll~~ 140 (462)
+.+++|+=||.|.+..++... +-...-+.++|.++...+..+.+..+
T Consensus 3 ~~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~~ 49 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFPE 49 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CCEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCCC
Confidence 468999999999988887763 10125678999999998888776643
No 363
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=32.68 E-value=45 Score=35.70 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=26.9
Q ss_pred CCCeEEEECCchhHHHHHHHHhCC-------C---CccEEEEEeC
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWP-------R---SLEKVNLVEP 126 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~-------~---~~~~v~~VD~ 126 (462)
++.+|||+|.|+|..+.++.+.|. . ....++.+|.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~ 102 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEK 102 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeC
Confidence 356999999999988877777662 1 1267999998
No 364
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=32.56 E-value=69 Score=30.07 Aligned_cols=62 Identities=19% Similarity=0.160 Sum_probs=40.0
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++-.+...+..|.+.. + ....+||-+|+ | .|..+..++..++ .+|++++.+++-++.++++
T Consensus 106 ~l~~~~~ta~~~l~~~~--~--~~g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 169 (302)
T 1iz0_A 106 AFPVSFLTAYLALKRAQ--A--RPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEKLALPLAL 169 (302)
T ss_dssp TSHHHHHHHHHHHHHTT--C--CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGGSHHHHHT
T ss_pred HhhhHHHHHHHHHHHhc--C--CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhc
Confidence 34455555555554322 1 23579999998 4 4655656666554 4899999999888777653
No 365
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=31.52 E-value=1.5e+02 Score=28.06 Aligned_cols=63 Identities=17% Similarity=-0.047 Sum_probs=38.0
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCc--hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAG--TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G--~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++-.+...+..|.+ ........+||-.|++ .|..+..++...+ .+|+++|.+++.++.++++
T Consensus 125 ~l~~~~~ta~~al~~---~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~~ 189 (333)
T 1v3u_A 125 TIGMPGLTAYFGLLE---VCGVKGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEKIAYLKQI 189 (333)
T ss_dssp TTSHHHHHHHHHHHT---TSCCCSSCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHT
T ss_pred HhCChHHHHHHHHHH---hhCCCCCCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhc
Confidence 344445454444422 2222245799999983 4544444444443 4899999999888877543
No 366
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=30.83 E-value=2.3e+02 Score=26.68 Aligned_cols=38 Identities=21% Similarity=0.263 Sum_probs=24.4
Q ss_pred CCCCCeEEEECCchhHHH---HHHHHhCCCCccEEEEEeCCHHHH
Q 012511 90 GFSPAKVLDFGAGTGSAF---WALREVWPRSLEKVNLVEPSQSMQ 131 (462)
Q Consensus 90 ~~~p~rVLDvG~G~G~~~---~al~~~~~~~~~~v~~VD~S~~ml 131 (462)
+...++||=+|+| |.+- .++.+ ....+++.++.+.+-.
T Consensus 123 ~l~~k~vlvlGaG-g~g~aia~~L~~---~G~~~v~v~~R~~~~a 163 (281)
T 3o8q_A 123 LLKGATILLIGAG-GAARGVLKPLLD---QQPASITVTNRTFAKA 163 (281)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHT---TCCSEEEEEESSHHHH
T ss_pred CccCCEEEEECch-HHHHHHHHHHHh---cCCCeEEEEECCHHHH
Confidence 3456899999998 4322 22332 1235899999998643
No 367
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=30.59 E-value=2e+02 Score=26.89 Aligned_cols=38 Identities=24% Similarity=0.341 Sum_probs=25.3
Q ss_pred CCCCCeEEEECCchhH--HHHHHHHhCCCCccEEEEEeCCHHH
Q 012511 90 GFSPAKVLDFGAGTGS--AFWALREVWPRSLEKVNLVEPSQSM 130 (462)
Q Consensus 90 ~~~p~rVLDvG~G~G~--~~~al~~~~~~~~~~v~~VD~S~~m 130 (462)
....+++|=+|+|..+ .++++.+ . ...+++.++.+.+-
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~-~--g~~~i~i~nRt~~r 161 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAE-A--GIASITLCDPSTAR 161 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH-T--TCSEEEEECSCHHH
T ss_pred CcccCeEEEEecHHHHHHHHHHHHH-h--CCCeEEEeCCCHHH
Confidence 3456899999999542 2334444 2 35689999998753
No 368
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=29.90 E-value=1.4e+02 Score=28.76 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=22.4
Q ss_pred CCCCCeEEEECCchhHH---HHHHHHhCCCCccEEEEEeCC
Q 012511 90 GFSPAKVLDFGAGTGSA---FWALREVWPRSLEKVNLVEPS 127 (462)
Q Consensus 90 ~~~p~rVLDvG~G~G~~---~~al~~~~~~~~~~v~~VD~S 127 (462)
+...+++|=+|+| |.+ +.++.. . ...+|+.++.+
T Consensus 151 ~l~gk~~lVlGaG-G~g~aia~~L~~-~--Ga~~V~i~nR~ 187 (315)
T 3tnl_A 151 DIIGKKMTICGAG-GAATAICIQAAL-D--GVKEISIFNRK 187 (315)
T ss_dssp CCTTSEEEEECCS-HHHHHHHHHHHH-T--TCSEEEEEECS
T ss_pred CccCCEEEEECCC-hHHHHHHHHHHH-C--CCCEEEEEECC
Confidence 3456899999998 432 233333 2 23589999998
No 369
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=29.77 E-value=98 Score=29.39 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=33.4
Q ss_pred CeEEEECCchhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhh
Q 012511 94 AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLM 138 (462)
Q Consensus 94 ~rVLDvG~G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll 138 (462)
++|||+=||.|.+..++... ...-+.++|.++...+..+...
T Consensus 1 mkvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~ 42 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNH 42 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHC
Confidence 47999999999888887763 3456789999999888877654
No 370
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=29.29 E-value=77 Score=30.38 Aligned_cols=62 Identities=18% Similarity=0.277 Sum_probs=39.4
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECC--chhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGA--GTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~--G~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++-.+...+..|... .......+||-+|+ |.|..+..++...+ .++++++.+++-++.++.+
T Consensus 147 l~~~~~ta~~al~~~---~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~~~~~~~~~~ 210 (343)
T 2eih_A 147 IPLTFLTAWQMVVDK---LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSEDKLRRAKAL 210 (343)
T ss_dssp SHHHHHHHHHHHTTT---SCCCTTCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHh---cCCCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhc
Confidence 344454554444321 11223579999998 35666666666554 4899999999988887753
No 371
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=28.92 E-value=1.7e+02 Score=22.97 Aligned_cols=73 Identities=12% Similarity=0.161 Sum_probs=40.6
Q ss_pred ccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC---CCCCcccEEEecccccCCCCHHHHHHHHHH
Q 012511 118 LEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS---KSEREHDLVIASYVLGEVPSLQDRITIVRQ 191 (462)
Q Consensus 118 ~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~---~~~~~fDLVias~vL~el~~~~~r~~~i~~ 191 (462)
..++..||-++......+..+........+....+.......+. .....+|+||+...+.... ..+....+++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~-g~~~~~~l~~ 84 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGIN-GWELIDLFKQ 84 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSC-HHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCC-HHHHHHHHHH
Confidence 45789999999888887777776443111111111111111111 1125799999998877664 4444444444
No 372
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=28.57 E-value=1.3e+02 Score=29.01 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=38.2
Q ss_pred CchhHHHHHHHHHHHHHHCCCC-CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHH
Q 012511 70 MPAVYSACYRVLCEVRRRLPGF-SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQ 135 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~-~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak 135 (462)
++..+...+..|.. .... ...+||=+|+|+ |..+..++..++ .+|++++.+++-++.++
T Consensus 161 l~~~~~ta~~~l~~----~~~~~~g~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 161 LLCAGVTVYSPLSH----FGLKQPGLRGGILGLGGVGHMGVKIAKAMG---HHVTVISSSNKKREEAL 221 (357)
T ss_dssp GGTHHHHHHHHHHH----TSTTSTTCEEEEECCSHHHHHHHHHHHHHT---CEEEEEESSTTHHHHHH
T ss_pred hhhhHHHHHHHHHh----cCCCCCCCEEEEECCCHHHHHHHHHHHHCC---CeEEEEeCChHHHHHHH
Confidence 44444444444432 2222 457999999874 666666666654 37999999988777766
No 373
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=28.49 E-value=1.7e+02 Score=27.76 Aligned_cols=61 Identities=16% Similarity=-0.008 Sum_probs=39.1
Q ss_pred hcCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCc--hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHH
Q 012511 68 SRMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAG--TGSAFWALREVWPRSLEKVNLVEPSQSMQRAG 134 (462)
Q Consensus 68 ~r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G--~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~A 134 (462)
.-++-.+...+..|.+ +..-....+||-+|++ .|..+..++...+ .+|++++.+++-++.+
T Consensus 128 a~l~~~~~tA~~al~~---~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 128 SALGMTGMTAYFALLD---VGQPKNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGAEKCRFL 190 (336)
T ss_dssp TTTSHHHHHHHHHHHH---TTCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH
T ss_pred hhcccHHHHHHHHHHH---hcCCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH
Confidence 3455555555555533 2222345799999983 4555555555544 4899999999887777
No 374
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=27.94 E-value=1.5e+02 Score=27.95 Aligned_cols=43 Identities=19% Similarity=0.104 Sum_probs=31.7
Q ss_pred CCCeEEEEC-Cc-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFG-AG-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG-~G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+| +| .|..+..++...+ .+|++++.+++-++.++++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHc
Confidence 457999999 44 4665655665544 4899999999988888764
No 375
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=26.61 E-value=1.5e+02 Score=28.67 Aligned_cols=63 Identities=24% Similarity=0.048 Sum_probs=41.1
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEEC-Cc-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFG-AG-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG-~G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
-++..+...+..|.++. ....+.+||-+| +| .|..+..++..++ .+|++++.+++-++.++++
T Consensus 143 al~~~~~ta~~al~~~~---~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~~~ 207 (362)
T 2c0c_A 143 TLLVSGTTAYISLKELG---GLSEGKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSDEKSAFLKSL 207 (362)
T ss_dssp TTTTHHHHHHHHHHHHT---CCCTTCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHhc---CCCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHc
Confidence 34555555555554322 122357999999 45 4766666666654 3799999999888887763
No 376
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=26.00 E-value=2.1e+02 Score=26.81 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=24.4
Q ss_pred CCCCeEEEECCchhHH---HHHHHHhCCCCccEEEEEeCCHHHH
Q 012511 91 FSPAKVLDFGAGTGSA---FWALREVWPRSLEKVNLVEPSQSMQ 131 (462)
Q Consensus 91 ~~p~rVLDvG~G~G~~---~~al~~~~~~~~~~v~~VD~S~~ml 131 (462)
...+++|=+|+| |.+ +.++.+ . ...+++.++.+.+-.
T Consensus 118 l~~k~~lvlGaG-g~~~aia~~L~~-~--G~~~v~i~~R~~~~a 157 (272)
T 3pwz_A 118 LRNRRVLLLGAG-GAVRGALLPFLQ-A--GPSELVIANRDMAKA 157 (272)
T ss_dssp CTTSEEEEECCS-HHHHHHHHHHHH-T--CCSEEEEECSCHHHH
T ss_pred ccCCEEEEECcc-HHHHHHHHHHHH-c--CCCEEEEEeCCHHHH
Confidence 456899999998 432 233443 2 235899999998643
No 377
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=25.80 E-value=1.1e+02 Score=29.38 Aligned_cols=63 Identities=19% Similarity=0.118 Sum_probs=38.5
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECCc--hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGAG--TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~G--~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++-.+...+..|.+ +..-....+||-.|++ .|..+..++...+ .+|++++.+++-++.++.+
T Consensus 150 ~l~~~~~ta~~al~~---~~~~~~g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 214 (351)
T 1yb5_A 150 AIGIPYFTAYRALIH---SACVKAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEEGQKIVLQN 214 (351)
T ss_dssp TTHHHHHHHHHHHHT---TSCCCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHH---hhCCCCcCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHc
Confidence 344445555544432 2222245799999973 4555555555443 4899999999888777654
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=25.33 E-value=1e+02 Score=29.69 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=39.2
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEEC-Cc-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFG-AG-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG-~G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++..+...+..|.+ +..-....+||-+| +| .|.++..++...+ .+|++++.+++-++.++++
T Consensus 148 l~~~~~ta~~~l~~---~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~l 211 (353)
T 4dup_A 148 LPETFFTVWANLFQ---MAGLTEGESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGSTGKCEACERL 211 (353)
T ss_dssp SHHHHHHHHHHHTT---TTCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH---hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhc
Confidence 44455555444432 22222457999995 44 4666666666554 4799999999988888764
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.40 E-value=1.1e+02 Score=26.22 Aligned_cols=40 Identities=25% Similarity=0.288 Sum_probs=26.9
Q ss_pred CCeEEEECCch-hHHHH-HHHHhCCCC-ccEEEEEeCCHHHHHHHHH
Q 012511 93 PAKVLDFGAGT-GSAFW-ALREVWPRS-LEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 93 p~rVLDvG~G~-G~~~~-al~~~~~~~-~~~v~~VD~S~~ml~~Ak~ 136 (462)
..+|+=+|+|. |..+. .+.+ . ..+|+++|.+++-.+.++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~----~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA----RYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH----HHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHh----ccCCeEEEEECCHHHHHHHHH
Confidence 46899999995 54333 2332 2 3479999999987766543
No 380
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=24.15 E-value=2.2e+02 Score=26.73 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=36.9
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEEC-Cch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFG-AGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG-~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
+|-.+...+..| + +.....+.+||=+| +|+ |.++..++..++ .++++++.+.. ++.++++
T Consensus 134 l~~~~~ta~~al-~---~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~~~~~-~~~~~~l 195 (321)
T 3tqh_A 134 LPTAGLTALQAL-N---QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG---TTVITTASKRN-HAFLKAL 195 (321)
T ss_dssp SHHHHHHHHHHH-H---HTTCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEECHHH-HHHHHHH
T ss_pred hhhHHHHHHHHH-H---hcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeccch-HHHHHHc
Confidence 455555555555 2 22223457999997 663 777777777664 37888875444 6777654
No 381
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=24.13 E-value=1.2e+02 Score=28.93 Aligned_cols=43 Identities=16% Similarity=0.148 Sum_probs=31.5
Q ss_pred CCCeEEEECCch--hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT--GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~--G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||-+|+|. |.++..++..++ .+|++++.+++-++.++++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhC
Confidence 457999999985 444445555443 4899999999888888764
No 382
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=23.76 E-value=1.6e+02 Score=23.35 Aligned_cols=70 Identities=10% Similarity=0.024 Sum_probs=40.1
Q ss_pred cEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHh
Q 012511 119 EKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWD 194 (462)
Q Consensus 119 ~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~ 194 (462)
.++..||-++...+..+..+...+....+....+.......+ ....+|+||+...+.... . .++++.+-+
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l--~~~~~dlii~D~~l~~~~-g---~~~~~~lr~ 75 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQV--QQAKYDLIILDIGLPIAN-G---FEVMSAVRK 75 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHH--TTCCCSEEEECTTCGGGC-H---HHHHHHHHS
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHh--hcCCCCEEEEeCCCCCCC-H---HHHHHHHHh
Confidence 578999999998888887776543221121111121111112 235689999988766543 2 345555544
No 383
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=23.72 E-value=1.9e+02 Score=27.44 Aligned_cols=62 Identities=15% Similarity=-0.044 Sum_probs=38.8
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHH
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQS 136 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ 136 (462)
.++-.+...+..|.+ +.......+||-+|+ | .|..+..++...+ .+|++++.+++-++.+++
T Consensus 135 ~l~~~~~ta~~al~~---~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 135 LLGMPGMTAYAGFYE---VCSPKEGETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp TTSHHHHHHHHHHHT---TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH
T ss_pred hccccHHHHHHHHHH---HhCCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH
Confidence 344455555554432 222224579999997 3 4555555555544 489999999988887763
No 384
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=23.52 E-value=76 Score=30.42 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=32.1
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.+.+||-+|+|+ |..+..++..++ ..+|++++.|++-++.++++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~l 208 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASG--AGPILVSDPNPYRLAFARPY 208 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHGGGTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh
Confidence 567999999964 666666666554 23799999999877766654
No 385
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=22.98 E-value=2.3e+02 Score=22.35 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=38.0
Q ss_pred CccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEecccccCCC
Q 012511 117 SLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVP 180 (462)
Q Consensus 117 ~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~ 180 (462)
....|..+|-++.+....+..++.......+....+....-..+. ....+|+|++...+....
T Consensus 12 ~~~~vlivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~-~~~~~dlvilD~~l~~~~ 74 (145)
T 3kyj_B 12 SPYNVMIVDDAAMMRLYIASFIKTLPDFKVVAQAANGQEALDKLA-AQPNVDLILLDIEMPVMD 74 (145)
T ss_dssp CSEEEEEECSCHHHHHHHHHHHTTCTTEEEEEEESSHHHHHHHHH-HCTTCCEEEECTTSCCCT
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHhCCCceEEEEECCHHHHHHHHh-cCCCCCEEEEeCCCCCCC
Confidence 456899999999999988888876533222211111111111111 112689999998887664
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=22.65 E-value=2.2e+02 Score=27.40 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=30.7
Q ss_pred CCCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHH
Q 012511 92 SPAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQ 135 (462)
Q Consensus 92 ~p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak 135 (462)
...+||=+|+|+ |..+..++..++ .+|++++.+++-++.++
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG---SKVTVISTSPSKKEEAL 228 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHH
Confidence 457999999874 666666666654 47999999988777665
No 387
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=22.47 E-value=90 Score=30.52 Aligned_cols=42 Identities=12% Similarity=-0.087 Sum_probs=30.4
Q ss_pred CCeEEEE--CCc-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 93 PAKVLDF--GAG-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 93 p~rVLDv--G~G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
+.+||=+ |+| .|.++..++..++ .+|++++.|++-++.++++
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~~~~~~~~~~~l 215 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDG---IKLVNIVRKQEQADLLKAQ 215 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEESSHHHHHHHHHT
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhC
Confidence 4689988 454 3566666666654 3799999999988888763
No 388
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=22.41 E-value=1.2e+02 Score=24.43 Aligned_cols=82 Identities=7% Similarity=0.054 Sum_probs=45.0
Q ss_pred CccEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCCCCcccEEEecccccCCCCHHHHHHHHHHHHhc-
Q 012511 117 SLEKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDL- 195 (462)
Q Consensus 117 ~~~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~- 195 (462)
...++..||-++...+..+..+........+....+.......+ ....+|+||+...+.... ..+ +++.+-+.
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l--~~~~~dlii~d~~l~~~~-g~~---~~~~l~~~~ 87 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELI--KAHLPDVALLDYRMPGMD-GAQ---VAAAVRSYE 87 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHH--HHHCCSEEEEETTCSSSC-HHH---HHHHHHHTT
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHH--HhcCCCEEEEeCCCCCCC-HHH---HHHHHHhcC
Confidence 35689999999998888777776543222221111121111111 123689999998876653 333 44444433
Q ss_pred CCCEEEEEe
Q 012511 196 TRDVLVLVE 204 (462)
Q Consensus 196 ~gG~LVlVE 204 (462)
+.-.+|++-
T Consensus 88 ~~~~ii~~s 96 (152)
T 3eul_A 88 LPTRVLLIS 96 (152)
T ss_dssp CSCEEEEEE
T ss_pred CCCeEEEEE
Confidence 344455443
No 389
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=22.21 E-value=2.9e+02 Score=26.22 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=31.9
Q ss_pred CCCeEEEE-CCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 92 SPAKVLDF-GAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 92 ~p~rVLDv-G~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
...+||=+ |+|+ |.++..++...+ .+|++++.+++-++.++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l 194 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRNETIEWTKKM 194 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhc
Confidence 35799999 4663 666666666554 4899999999988888764
No 390
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=22.06 E-value=1.1e+02 Score=29.05 Aligned_cols=40 Identities=20% Similarity=0.107 Sum_probs=29.0
Q ss_pred eEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 95 KVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 95 rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
+||=+|+ | .|..+..++..++ .++++++.+++-++.++++
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~~~~~~~l 194 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADYLKQL 194 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHc
Confidence 8999997 4 3555556666554 3699999998777777653
No 391
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=21.92 E-value=1.5e+02 Score=28.33 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=34.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCCccE--EEEEeCCHHHHHHHHHhhc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRSLEK--VNLVEPSQSMQRAGQSLMQ 139 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~~~~--v~~VD~S~~ml~~Ak~ll~ 139 (462)
.+.+|||+=||.|.+..++... ...- +.++|.++...+..+.+..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a---G~~~~~v~a~E~d~~a~~ty~~N~~ 61 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL---GIQVDRYIASEVCEDSITVGMVRHQ 61 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT---TBCEEEEEEECCCHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccHHHHHHHHC---CCccceEEEEECCHHHHHHHHHhCC
Confidence 3569999999999988887763 1222 6899999998887766543
No 392
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=21.83 E-value=2.4e+02 Score=22.53 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=39.8
Q ss_pred cEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccC-------CCCCcccEEEecccccCCCCHHHHHHHHHH
Q 012511 119 EKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDIS-------KSEREHDLVIASYVLGEVPSLQDRITIVRQ 191 (462)
Q Consensus 119 ~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~-------~~~~~fDLVias~vL~el~~~~~r~~~i~~ 191 (462)
.++..||-++...+..+..+...+....+....+.......+. .....+|+||+...+.... .-+ +++.
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~-g~~---~~~~ 80 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMT-GID---ILKL 80 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSB-HHH---HHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCc-HHH---HHHH
Confidence 4789999999988888877765432111111111111111110 0245799999998877653 333 4444
Q ss_pred HHh
Q 012511 192 LWD 194 (462)
Q Consensus 192 Lw~ 194 (462)
+-+
T Consensus 81 lr~ 83 (152)
T 3heb_A 81 VKE 83 (152)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 393
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=20.99 E-value=2.4e+02 Score=27.04 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=38.1
Q ss_pred cCchhHHHHHHHHHHHHHHCCCCCCCeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 69 RMPAVYSACYRVLCEVRRRLPGFSPAKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 69 r~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
.++..+...+..|.+ +..-....+||-.|+ | .|..+..++...+ .+|++++.+++-++.++++
T Consensus 142 ~l~~~~~tA~~al~~---~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 206 (354)
T 2j8z_A 142 AIPEAWLTAFQLLHL---VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQKKLQMAEKL 206 (354)
T ss_dssp TSHHHHHHHHHHHTT---TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred hccchHHHHHHHHHH---hcCCCCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHc
Confidence 344445444444422 222224579999994 3 4555555555443 4899999999988887654
No 394
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.91 E-value=2.9e+02 Score=21.20 Aligned_cols=62 Identities=15% Similarity=0.083 Sum_probs=35.8
Q ss_pred cEEEEEeCCHHHHHHHHHhhcCCCCCCceecchhHhhhhhccCCC-----CCcccEEEecccccCCC
Q 012511 119 EKVNLVEPSQSMQRAGQSLMQGPKDLPLIHSYNSIQALNKDISKS-----EREHDLVIASYVLGEVP 180 (462)
Q Consensus 119 ~~v~~VD~S~~ml~~Ak~ll~~~~~~~~i~~~~~~~~l~~~l~~~-----~~~fDLVias~vL~el~ 180 (462)
.++..||-++......+..+...+....+....+.......+... ...+|+|++...+....
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~ 69 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKD 69 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSC
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCccc
Confidence 478899999998888888777644211122112222211112110 15799999998776653
No 395
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=20.87 E-value=1.5e+02 Score=30.01 Aligned_cols=43 Identities=23% Similarity=0.310 Sum_probs=30.0
Q ss_pred CCeEEEECCch-hHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHhh
Q 012511 93 PAKVLDFGAGT-GSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLM 138 (462)
Q Consensus 93 p~rVLDvG~G~-G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~ll 138 (462)
.++|+=+|||- |. .+++.+.....+|++||.+++.++.+...+
T Consensus 3 ~M~iiI~G~G~vG~---~la~~L~~~~~~v~vId~d~~~~~~~~~~~ 46 (461)
T 4g65_A 3 AMKIIILGAGQVGG---TLAENLVGENNDITIVDKDGDRLRELQDKY 46 (461)
T ss_dssp CEEEEEECCSHHHH---HHHHHTCSTTEEEEEEESCHHHHHHHHHHS
T ss_pred cCEEEEECCCHHHH---HHHHHHHHCCCCEEEEECCHHHHHHHHHhc
Confidence 36899999983 43 333444334678999999999887766544
No 396
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=20.81 E-value=2e+02 Score=27.39 Aligned_cols=62 Identities=24% Similarity=0.186 Sum_probs=39.9
Q ss_pred CchhHHHHHHHHHHHHHHCCCCCCCeEEEECC-c-hhHHHHHHHHhCCCCccEEEEEeCCHHHHHHHHHh
Q 012511 70 MPAVYSACYRVLCEVRRRLPGFSPAKVLDFGA-G-TGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSL 137 (462)
Q Consensus 70 ~p~~Ya~~~~vL~eL~~rlp~~~p~rVLDvG~-G-~G~~~~al~~~~~~~~~~v~~VD~S~~ml~~Ak~l 137 (462)
++..+...+..|.+ +..-....+||=+|+ | .|.++..++..++ .+|++++.+++-++.++++
T Consensus 140 l~~~~~ta~~~l~~---~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 140 LIANYHTMYFAYAR---RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp HTTHHHHHHHHHHT---TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHH
T ss_pred hhhHHHHHHHHHHH---hcCCCCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHhc
Confidence 34445555444432 222234579999998 4 4666666666654 4899999999888888764
No 397
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=20.02 E-value=1.8e+02 Score=26.47 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=57.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhCCCC-ccEEEEEeCCHH--HHHHHHHhhcCCCCCCceecch----hHh----hhhhcc
Q 012511 92 SPAKVLDFGAGTGSAFWALREVWPRS-LEKVNLVEPSQS--MQRAGQSLMQGPKDLPLIHSYN----SIQ----ALNKDI 160 (462)
Q Consensus 92 ~p~rVLDvG~G~G~~~~al~~~~~~~-~~~v~~VD~S~~--ml~~Ak~ll~~~~~~~~i~~~~----~~~----~l~~~l 160 (462)
.+.+|.=+.+|+|+.+.++.+.+... ..++.+|=.++. .++.|++ .++|...... +.. .+...+
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~-----~gIp~~~~~~~~~~~r~~~d~~~~~~l 85 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAE-----ASVPVFTVRLADHPSRDAWDVAITAAT 85 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHH-----TTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHH-----cCCCEEEeCcccccchhhhhHHHHHHH
Confidence 34689999999999999988876431 236666644333 3344433 2355432210 011 111112
Q ss_pred CCCCCcccEEEecccccCCCCHHHHHHHHHHHHhcCCCEEEEEecCCC
Q 012511 161 SKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTP 208 (462)
Q Consensus 161 ~~~~~~fDLVias~vL~el~~~~~r~~~i~~Lw~~~gG~LVlVEpGtp 208 (462)
.....|+|++.....-|+ . .+++.+.+.+|-+-|+--
T Consensus 86 --~~~~~Dlivlagy~~iL~-~--------~~l~~~~~~~iNiHpSLL 122 (215)
T 3da8_A 86 --AAHEPDLVVSAGFMRILG-P--------QFLSRFYGRTLNTHPALL 122 (215)
T ss_dssp --HTTCCSEEEEEECCSCCC-H--------HHHHHHTTTEEEEESSCT
T ss_pred --HhhCCCEEEEcCchhhCC-H--------HHHhhccCCeEEeCcccc
Confidence 234689999988777776 2 223332344677888773
Done!