Query 012513
Match_columns 462
No_of_seqs 132 out of 1474
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:53:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8E-65 2.7E-69 507.7 38.2 408 11-456 13-454 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.8E-64 1.3E-68 510.8 43.4 434 11-456 6-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 1.8E-58 6.2E-63 467.3 37.4 414 11-456 9-463 (463)
4 2c1x_A UDP-glucose flavonoid 3 100.0 9E-58 3.1E-62 461.0 35.9 409 11-457 7-453 (456)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.5E-57 8.7E-62 462.0 36.7 415 10-457 7-480 (482)
6 4amg_A Snogd; transferase, pol 100.0 1E-43 3.5E-48 354.0 27.3 349 9-435 20-384 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 2.5E-42 8.6E-47 346.8 34.6 378 10-454 11-420 (424)
8 1iir_A Glycosyltransferase GTF 100.0 3.8E-40 1.3E-44 330.0 26.2 377 12-452 1-397 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.2E-39 7.6E-44 324.5 25.7 370 12-455 1-400 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 7E-38 2.4E-42 313.4 32.7 379 6-455 15-413 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 3E-39 1E-43 322.2 18.9 369 12-457 1-384 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 2.6E-36 8.8E-41 300.5 33.1 377 11-455 4-398 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 7.9E-37 2.7E-41 308.3 25.5 371 9-455 18-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.5E-36 8.6E-41 299.1 26.8 356 12-453 1-377 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 6.2E-35 2.1E-39 293.4 30.1 370 11-453 7-397 (430)
16 4fzr_A SSFS6; structural genom 100.0 1.1E-35 3.8E-40 295.9 21.7 348 6-435 10-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.2E-34 1.4E-38 284.5 27.1 350 8-450 17-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.6E-32 5.5E-37 272.3 28.8 354 11-451 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.3E-30 8E-35 258.4 30.5 368 7-455 16-408 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 1.4E-26 4.8E-31 202.1 14.6 160 242-434 9-169 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 5E-23 1.7E-27 201.8 28.5 311 11-417 2-325 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 8E-17 2.7E-21 157.4 27.7 338 12-457 7-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.5 2.1E-14 7.2E-19 128.6 9.5 132 252-413 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.3 1.1E-10 3.7E-15 108.9 19.8 117 254-396 157-275 (282)
25 3okp_A GDP-mannose-dependent a 99.2 4.2E-09 1.4E-13 103.3 25.1 115 326-460 253-382 (394)
26 3c48_A Predicted glycosyltrans 99.2 2.3E-08 7.9E-13 99.6 28.1 96 325-432 305-408 (438)
27 3fro_A GLGA glycogen synthase; 99.1 5.4E-08 1.8E-12 96.7 28.3 112 326-458 311-431 (439)
28 1v4v_A UDP-N-acetylglucosamine 99.0 6.9E-09 2.4E-13 101.3 18.4 108 326-454 255-365 (376)
29 1vgv_A UDP-N-acetylglucosamine 99.0 7E-09 2.4E-13 101.5 16.8 78 326-417 263-343 (384)
30 2gek_A Phosphatidylinositol ma 99.0 1.2E-07 4.1E-12 93.2 25.0 83 325-417 262-350 (406)
31 2iw1_A Lipopolysaccharide core 98.9 1E-07 3.6E-12 92.6 21.8 142 255-430 196-352 (374)
32 3ot5_A UDP-N-acetylglucosamine 98.9 3.2E-08 1.1E-12 97.6 17.9 109 326-455 282-393 (403)
33 2r60_A Glycosyl transferase, g 98.9 1.2E-07 4.2E-12 96.2 21.5 81 325-417 334-425 (499)
34 3dzc_A UDP-N-acetylglucosamine 98.9 2E-08 6.8E-13 99.0 14.9 85 326-427 288-375 (396)
35 3beo_A UDP-N-acetylglucosamine 98.9 6.8E-08 2.3E-12 94.0 17.9 78 326-417 263-343 (375)
36 2jjm_A Glycosyl transferase, g 98.9 1.6E-06 5.5E-11 85.0 27.5 113 326-457 267-385 (394)
37 2iuy_A Avigt4, glycosyltransfe 98.7 9.1E-07 3.1E-11 85.0 20.0 126 257-415 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 98.6 5E-05 1.7E-09 74.8 27.9 112 325-457 292-414 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.4 2E-06 6.8E-11 84.1 12.4 129 254-417 203-343 (385)
40 2f9f_A First mannosyl transfer 98.3 7.1E-06 2.4E-10 70.8 12.0 139 256-429 24-173 (177)
41 3s28_A Sucrose synthase 1; gly 98.3 3.2E-05 1.1E-09 82.2 18.7 91 326-428 640-747 (816)
42 2vsy_A XCC0866; transferase, g 98.2 0.0014 4.9E-08 67.1 29.0 83 326-417 434-523 (568)
43 2qzs_A Glycogen synthase; glyc 98.2 8.3E-05 2.8E-09 74.8 19.1 111 326-457 347-476 (485)
44 1rzu_A Glycogen synthase 1; gl 98.2 7.6E-05 2.6E-09 75.1 18.6 111 326-457 346-475 (485)
45 2hy7_A Glucuronosyltransferase 97.8 0.006 2.1E-07 59.7 23.6 76 326-417 265-353 (406)
46 2bfw_A GLGA glycogen synthase; 97.5 0.0018 6.2E-08 56.3 14.2 78 327-417 96-182 (200)
47 3qhp_A Type 1 capsular polysac 97.5 0.0012 4E-08 55.7 12.0 141 255-430 2-155 (166)
48 4gyw_A UDP-N-acetylglucosamine 97.3 0.0027 9.1E-08 67.1 14.7 97 254-371 522-629 (723)
49 3q3e_A HMW1C-like glycosyltran 97.3 0.0039 1.3E-07 63.5 15.1 138 255-417 441-589 (631)
50 3oy2_A Glycosyltransferase B73 97.3 0.0027 9.3E-08 62.1 13.5 78 328-417 256-356 (413)
51 2xci_A KDO-transferase, 3-deox 97.1 0.002 6.7E-08 62.5 10.6 98 327-434 261-364 (374)
52 3rhz_A GTF3, nucleotide sugar 97.1 0.0015 5.3E-08 62.2 8.8 111 327-454 215-337 (339)
53 3tov_A Glycosyl transferase fa 96.5 0.11 3.8E-06 49.5 16.8 44 10-53 7-51 (349)
54 1psw_A ADP-heptose LPS heptosy 95.3 1.9 6.7E-05 40.4 21.8 38 12-49 1-39 (348)
55 2x0d_A WSAF; GT4 family, trans 93.2 0.066 2.2E-06 52.4 4.4 78 327-417 296-380 (413)
56 3vue_A GBSS-I, granule-bound s 92.1 1.7 5.9E-05 43.8 13.4 83 326-415 382-476 (536)
57 3vue_A GBSS-I, granule-bound s 91.1 0.11 3.8E-06 52.7 3.3 44 1-49 1-52 (536)
58 1uqt_A Alpha, alpha-trehalose- 85.8 5 0.00017 39.8 11.1 107 330-457 336-454 (482)
59 2x0d_A WSAF; GT4 family, trans 83.7 0.52 1.8E-05 45.9 2.8 40 10-50 45-89 (413)
60 4dzz_A Plasmid partitioning pr 81.0 9 0.00031 32.4 9.6 84 12-129 1-86 (206)
61 3t5t_A Putative glycosyltransf 79.1 9.4 0.00032 37.8 9.9 110 327-456 353-472 (496)
62 2gt1_A Lipopolysaccharide hept 75.3 19 0.00064 33.1 10.6 41 12-52 1-42 (326)
63 1g5t_A COB(I)alamin adenosyltr 73.6 35 0.0012 29.0 10.8 103 11-129 28-131 (196)
64 3zqu_A Probable aromatic acid 73.6 3.9 0.00013 35.4 4.8 40 8-49 1-40 (209)
65 3nb0_A Glycogen [starch] synth 72.7 4.8 0.00016 41.5 5.9 47 328-374 495-552 (725)
66 4b4k_A N5-carboxyaminoimidazol 70.7 45 0.0015 27.7 10.6 139 255-437 23-174 (181)
67 3oow_A Phosphoribosylaminoimid 69.2 40 0.0014 27.7 9.5 144 255-439 6-159 (166)
68 2ywr_A Phosphoribosylglycinami 67.6 28 0.00097 30.1 9.1 35 11-49 1-37 (216)
69 3auf_A Glycinamide ribonucleot 66.5 27 0.00093 30.5 8.8 38 9-49 20-58 (229)
70 3da8_A Probable 5'-phosphoribo 62.1 55 0.0019 28.3 9.8 115 273-430 79-195 (215)
71 3rg8_A Phosphoribosylaminoimid 61.8 61 0.0021 26.4 9.3 139 256-435 4-148 (159)
72 2iz6_A Molybdenum cofactor car 60.9 57 0.0019 27.2 9.4 45 329-373 92-140 (176)
73 3dfz_A SIRC, precorrin-2 dehyd 59.4 59 0.002 28.2 9.6 155 246-438 25-188 (223)
74 1xmp_A PURE, phosphoribosylami 59.1 35 0.0012 28.1 7.5 143 255-439 12-165 (170)
75 3nrb_A Formyltetrahydrofolate 58.8 33 0.0011 31.2 8.2 114 273-429 155-270 (287)
76 3kcq_A Phosphoribosylglycinami 57.6 52 0.0018 28.4 8.9 115 273-430 72-188 (215)
77 3kcq_A Phosphoribosylglycinami 57.6 29 0.00098 30.1 7.2 40 7-49 4-44 (215)
78 2r8r_A Sensor protein; KDPD, P 56.6 17 0.00057 31.9 5.5 41 9-50 4-44 (228)
79 3ug7_A Arsenical pump-driving 56.4 38 0.0013 31.7 8.5 39 11-50 25-64 (349)
80 3obi_A Formyltetrahydrofolate 56.4 36 0.0012 31.0 8.0 115 273-430 156-272 (288)
81 1meo_A Phosophoribosylglycinam 56.3 79 0.0027 27.1 9.8 115 273-430 69-185 (209)
82 3av3_A Phosphoribosylglycinami 56.2 59 0.002 28.0 9.0 36 11-49 3-39 (212)
83 3o1l_A Formyltetrahydrofolate 56.1 64 0.0022 29.5 9.6 117 270-429 168-286 (302)
84 3tqr_A Phosphoribosylglycinami 56.0 54 0.0019 28.3 8.7 115 273-430 73-189 (215)
85 4ds3_A Phosphoribosylglycinami 54.9 44 0.0015 28.7 7.9 115 273-430 76-192 (209)
86 3lou_A Formyltetrahydrofolate 54.7 39 0.0013 30.8 8.0 115 273-430 161-277 (292)
87 3n0v_A Formyltetrahydrofolate 54.4 43 0.0015 30.4 8.2 115 273-430 156-272 (286)
88 2i2c_A Probable inorganic poly 54.3 7 0.00024 35.4 2.9 53 342-416 35-93 (272)
89 4b4o_A Epimerase family protei 53.8 13 0.00043 33.8 4.6 32 12-48 1-32 (298)
90 3igf_A ALL4481 protein; two-do 53.8 26 0.0009 33.2 6.9 37 11-48 1-38 (374)
91 3auf_A Glycinamide ribonucleot 53.0 63 0.0022 28.2 8.8 114 273-429 91-206 (229)
92 3bfv_A CAPA1, CAPB2, membrane 52.6 84 0.0029 28.0 9.9 39 11-50 81-121 (271)
93 3qha_A Putative oxidoreductase 51.7 9.4 0.00032 34.9 3.3 43 1-49 5-47 (296)
94 3av3_A Phosphoribosylglycinami 51.2 81 0.0028 27.1 9.1 114 274-430 73-188 (212)
95 3ors_A N5-carboxyaminoimidazol 50.9 1E+02 0.0035 25.2 9.6 141 256-436 5-154 (163)
96 3mc3_A DSRE/DSRF-like family p 50.9 22 0.00075 28.1 5.0 37 12-49 16-55 (134)
97 1ccw_A Protein (glutamate muta 50.7 21 0.00072 28.3 4.9 38 11-49 3-40 (137)
98 1jkx_A GART;, phosphoribosylgl 50.4 72 0.0025 27.4 8.6 114 273-429 69-184 (212)
99 3p9x_A Phosphoribosylglycinami 50.4 80 0.0027 27.1 8.8 102 273-413 71-174 (211)
100 1yt5_A Inorganic polyphosphate 50.2 9.1 0.00031 34.3 2.9 53 342-416 41-96 (258)
101 3qjg_A Epidermin biosynthesis 50.1 18 0.00063 30.2 4.6 40 12-53 6-45 (175)
102 2l82_A Designed protein OR32; 49.0 34 0.0012 25.6 5.3 34 256-293 3-36 (162)
103 1o4v_A Phosphoribosylaminoimid 48.7 1.2E+02 0.004 25.3 9.9 138 255-437 14-163 (183)
104 2i2x_B MTAC, methyltransferase 48.6 25 0.00086 31.4 5.6 39 10-49 122-160 (258)
105 1y80_A Predicted cobalamin bin 48.0 21 0.00072 30.6 4.8 39 10-49 87-125 (210)
106 3lp6_A Phosphoribosylaminoimid 47.9 85 0.0029 26.0 8.1 141 255-436 8-156 (174)
107 2yxb_A Coenzyme B12-dependent 47.7 17 0.00059 29.8 4.0 39 10-49 17-55 (161)
108 1v5e_A Pyruvate oxidase; oxido 47.4 37 0.0013 34.4 7.3 27 345-371 69-101 (590)
109 2ejb_A Probable aromatic acid 47.2 26 0.00089 29.6 5.2 36 12-49 2-37 (189)
110 1kjn_A MTH0777; hypotethical p 46.7 17 0.00058 29.3 3.5 38 11-49 6-45 (157)
111 1u11_A PURE (N5-carboxyaminoim 46.4 82 0.0028 26.2 7.8 143 256-441 23-177 (182)
112 3ty2_A 5'-nucleotidase SURE; s 45.7 33 0.0011 30.6 5.7 41 10-53 10-50 (261)
113 2ywr_A Phosphoribosylglycinami 44.7 84 0.0029 27.0 8.2 115 273-430 70-186 (216)
114 1jkx_A GART;, phosphoribosylgl 44.6 1.4E+02 0.005 25.4 9.7 35 12-49 1-36 (212)
115 3lqk_A Dipicolinate synthase s 43.8 27 0.00093 29.9 4.8 41 11-53 7-48 (201)
116 4hcj_A THIJ/PFPI domain protei 42.0 40 0.0014 28.0 5.5 42 6-49 2-44 (177)
117 1sbz_A Probable aromatic acid 41.5 34 0.0012 29.1 5.0 37 12-49 1-37 (197)
118 3cio_A ETK, tyrosine-protein k 41.2 97 0.0033 28.1 8.5 39 11-50 103-143 (299)
119 3ezx_A MMCP 1, monomethylamine 40.7 32 0.0011 29.7 4.8 40 9-49 90-129 (215)
120 3mcu_A Dipicolinate synthase, 40.7 24 0.00084 30.3 4.0 40 11-52 5-45 (207)
121 3dhn_A NAD-dependent epimerase 40.4 25 0.00086 30.1 4.2 35 10-49 3-37 (227)
122 3afo_A NADH kinase POS5; alpha 39.7 15 0.00053 35.0 2.8 60 335-416 107-171 (388)
123 3kuu_A Phosphoribosylaminoimid 39.6 1.6E+02 0.0055 24.3 10.7 145 256-439 14-166 (174)
124 1u0t_A Inorganic polyphosphate 39.4 33 0.0011 31.4 5.0 56 339-416 72-131 (307)
125 1ybh_A Acetolactate synthase, 39.2 55 0.0019 33.1 7.1 25 347-371 78-108 (590)
126 1mvl_A PPC decarboxylase athal 38.1 36 0.0012 29.3 4.7 39 11-52 19-57 (209)
127 3lrx_A Putative hydrogenase; a 38.0 29 0.00098 28.2 3.9 36 11-50 23-58 (158)
128 1ydn_A Hydroxymethylglutaryl-C 38.0 1.9E+02 0.0066 25.9 10.0 25 267-291 23-47 (295)
129 1xp8_A RECA protein, recombina 37.3 1.3E+02 0.0044 28.2 8.9 40 13-53 76-115 (366)
130 3eag_A UDP-N-acetylmuramate:L- 37.0 32 0.0011 31.8 4.5 34 11-49 4-37 (326)
131 3vot_A L-amino acid ligase, BL 36.8 1.4E+02 0.0047 28.5 9.3 31 110-140 67-99 (425)
132 1ozh_A ALS, acetolactate synth 36.4 1.1E+02 0.0037 30.6 8.8 25 347-371 76-106 (566)
133 2h31_A Multifunctional protein 36.4 2.2E+02 0.0077 27.2 10.3 138 254-435 265-411 (425)
134 2q28_A Oxalyl-COA decarboxylas 36.1 80 0.0027 31.6 7.7 25 347-371 73-103 (564)
135 2c31_A Oxalyl-COA decarboxylas 35.9 74 0.0025 31.9 7.4 25 347-371 75-105 (568)
136 1id1_A Putative potassium chan 34.8 25 0.00086 28.1 3.1 33 11-49 3-35 (153)
137 3n7t_A Macrophage binding prot 34.7 75 0.0025 28.0 6.4 38 11-49 9-57 (247)
138 4grd_A N5-CAIR mutase, phospho 34.7 1.9E+02 0.0066 23.8 9.8 140 254-437 12-164 (173)
139 1t9b_A Acetolactate synthase, 34.6 92 0.0032 32.1 7.9 79 270-371 83-178 (677)
140 2uz1_A Benzaldehyde lyase; thi 34.4 59 0.002 32.6 6.3 25 347-371 69-99 (563)
141 2x7j_A 2-succinyl-5-enolpyruvy 34.4 59 0.002 33.0 6.4 26 346-371 96-127 (604)
142 3l7i_A Teichoic acid biosynthe 34.3 38 0.0013 35.3 5.0 114 330-456 603-720 (729)
143 1lss_A TRK system potassium up 33.9 32 0.0011 26.5 3.5 32 11-48 4-35 (140)
144 3h7a_A Short chain dehydrogena 33.6 1.7E+02 0.0059 25.3 8.7 33 12-48 7-39 (252)
145 3doj_A AT3G25530, dehydrogenas 33.5 32 0.0011 31.4 3.9 35 8-48 18-52 (310)
146 2qv7_A Diacylglycerol kinase D 33.3 43 0.0015 31.1 4.8 27 347-373 83-115 (337)
147 1jx7_A Hypothetical protein YC 32.7 60 0.0021 24.3 4.8 28 22-49 15-43 (117)
148 2zki_A 199AA long hypothetical 32.6 49 0.0017 27.7 4.7 39 10-50 3-42 (199)
149 3cky_A 2-hydroxymethyl glutara 32.5 43 0.0015 30.2 4.6 34 9-48 2-35 (301)
150 4eg0_A D-alanine--D-alanine li 32.0 56 0.0019 29.8 5.3 38 11-49 13-54 (317)
151 3hww_A 2-succinyl-5-enolpyruvy 31.2 1.3E+02 0.0044 30.1 8.2 27 345-371 72-104 (556)
152 1q6z_A BFD, BFDC, benzoylforma 31.0 72 0.0025 31.6 6.3 24 347-370 66-95 (528)
153 1eiw_A Hypothetical protein MT 31.0 60 0.0021 24.7 4.4 65 340-415 36-109 (111)
154 1g63_A Epidermin modifying enz 30.8 36 0.0012 28.5 3.4 39 12-52 3-41 (181)
155 1p3y_1 MRSD protein; flavoprot 30.8 31 0.0011 29.3 3.0 38 11-50 8-45 (194)
156 3tl4_X Glutaminyl-tRNA synthet 30.7 82 0.0028 26.5 5.5 63 387-458 111-181 (187)
157 2g1u_A Hypothetical protein TM 30.2 50 0.0017 26.3 4.2 34 10-49 18-51 (155)
158 3trh_A Phosphoribosylaminoimid 30.2 2.3E+02 0.0078 23.3 10.1 143 255-436 7-157 (169)
159 1qzu_A Hypothetical protein MD 30.0 41 0.0014 28.8 3.7 40 11-52 19-59 (206)
160 2ew2_A 2-dehydropantoate 2-red 29.8 33 0.0011 31.1 3.4 32 11-48 3-34 (316)
161 2pju_A Propionate catabolism o 29.8 58 0.002 28.3 4.6 28 346-374 65-92 (225)
162 3llv_A Exopolyphosphatase-rela 29.7 28 0.00096 27.3 2.5 33 11-49 6-38 (141)
163 3kjh_A CO dehydrogenase/acetyl 29.6 35 0.0012 29.6 3.3 38 12-50 1-38 (254)
164 4e5s_A MCCFLIKE protein (BA_56 29.6 89 0.003 28.9 6.2 30 266-295 61-90 (331)
165 2fb6_A Conserved hypothetical 29.5 61 0.0021 24.8 4.3 39 10-49 6-48 (117)
166 2pk3_A GDP-6-deoxy-D-LYXO-4-he 29.3 43 0.0015 30.3 4.0 39 7-49 7-45 (321)
167 2bon_A Lipid kinase; DAG kinas 29.0 78 0.0027 29.2 5.8 30 342-373 82-119 (332)
168 3rp8_A Flavoprotein monooxygen 28.8 36 0.0012 32.3 3.5 42 2-49 14-55 (407)
169 4hb9_A Similarities with proba 28.4 37 0.0012 32.0 3.5 31 11-47 1-31 (412)
170 2gt1_A Lipopolysaccharide hept 28.4 42 0.0015 30.7 3.8 134 254-416 178-322 (326)
171 4dll_A 2-hydroxy-3-oxopropiona 28.1 62 0.0021 29.7 4.9 33 10-48 30-62 (320)
172 1u94_A RECA protein, recombina 27.9 2.6E+02 0.0088 26.0 9.2 39 13-52 65-103 (356)
173 1ydh_A AT5G11950; structural g 27.8 2.3E+02 0.0079 24.3 8.1 120 255-389 10-162 (216)
174 1fmt_A Methionyl-tRNA FMet for 27.7 2.8E+02 0.0097 25.2 9.2 114 274-430 72-187 (314)
175 3dfu_A Uncharacterized protein 27.6 41 0.0014 29.5 3.3 33 10-48 5-37 (232)
176 2an1_A Putative kinase; struct 27.4 33 0.0011 31.1 2.8 33 338-372 59-95 (292)
177 3rfo_A Methionyl-tRNA formyltr 27.4 83 0.0028 29.0 5.5 40 8-53 1-40 (317)
178 2qx0_A 7,8-dihydro-6-hydroxyme 26.9 95 0.0032 25.3 5.1 29 256-284 3-31 (159)
179 1f9y_A HPPK, protein (6-hydrox 26.9 74 0.0025 25.9 4.5 28 256-283 2-29 (158)
180 3f6r_A Flavodoxin; FMN binding 26.7 83 0.0028 24.7 4.9 39 12-51 2-41 (148)
181 2phj_A 5'-nucleotidase SURE; S 26.6 89 0.003 27.6 5.3 40 11-53 1-40 (251)
182 3r6d_A NAD-dependent epimerase 26.4 67 0.0023 27.2 4.6 34 11-48 4-38 (221)
183 3ew7_A LMO0794 protein; Q8Y8U8 26.3 69 0.0024 26.9 4.6 32 12-48 1-32 (221)
184 3oy2_A Glycosyltransferase B73 26.1 58 0.002 30.6 4.5 37 12-50 1-40 (413)
185 2l2q_A PTS system, cellobiose- 26.1 92 0.0032 23.3 4.7 37 10-47 3-39 (109)
186 1qkk_A DCTD, C4-dicarboxylate 25.9 1.9E+02 0.0065 22.3 7.0 48 363-416 74-121 (155)
187 1qyd_A Pinoresinol-lariciresin 25.9 61 0.0021 29.1 4.4 34 11-49 4-37 (313)
188 3s40_A Diacylglycerol kinase; 25.8 87 0.003 28.4 5.4 27 347-373 66-98 (304)
189 2q5c_A NTRC family transcripti 25.5 47 0.0016 28.1 3.3 31 343-374 50-80 (196)
190 1gsa_A Glutathione synthetase; 25.5 57 0.0019 29.4 4.1 37 12-49 2-41 (316)
191 3bgw_A DNAB-like replicative h 25.2 71 0.0024 31.0 4.9 40 13-53 199-238 (444)
192 3hn2_A 2-dehydropantoate 2-red 24.8 48 0.0016 30.3 3.4 33 11-49 2-34 (312)
193 3hwr_A 2-dehydropantoate 2-red 24.8 47 0.0016 30.5 3.4 32 9-46 17-48 (318)
194 3qbc_A 2-amino-4-hydroxy-6-hyd 24.7 90 0.0031 25.5 4.6 28 256-283 6-33 (161)
195 2pzm_A Putative nucleotide sug 24.6 90 0.0031 28.4 5.4 34 10-48 19-52 (330)
196 3i83_A 2-dehydropantoate 2-red 24.5 48 0.0016 30.4 3.4 33 11-49 2-34 (320)
197 3q0i_A Methionyl-tRNA formyltr 24.4 2.6E+02 0.0089 25.5 8.3 68 274-373 76-143 (318)
198 2xws_A Sirohydrochlorin cobalt 24.0 2.3E+02 0.0079 21.6 7.0 36 255-290 5-42 (133)
199 1bg6_A N-(1-D-carboxylethyl)-L 23.9 50 0.0017 30.6 3.5 32 11-48 4-35 (359)
200 3s2u_A UDP-N-acetylglucosamine 23.9 79 0.0027 29.5 4.9 27 342-370 92-121 (365)
201 3lyh_A Cobalamin (vitamin B12) 23.8 2.3E+02 0.0079 21.4 6.9 37 254-290 6-42 (126)
202 1cbk_A Protein (7,8-dihydro-6- 23.6 92 0.0032 25.4 4.5 29 256-284 3-31 (160)
203 2h78_A Hibadh, 3-hydroxyisobut 23.6 59 0.002 29.4 3.8 32 11-48 3-34 (302)
204 1pjq_A CYSG, siroheme synthase 23.5 2.6E+02 0.0089 27.0 8.6 92 338-437 68-169 (457)
205 3fwz_A Inner membrane protein 23.5 46 0.0016 26.1 2.6 33 11-49 7-39 (140)
206 3obb_A Probable 3-hydroxyisobu 23.4 78 0.0027 28.8 4.5 31 11-47 3-33 (300)
207 2r85_A PURP protein PF1517; AT 23.3 65 0.0022 29.4 4.1 32 11-49 2-33 (334)
208 3lq1_A 2-succinyl-5-enolpyruvy 23.2 2.2E+02 0.0077 28.4 8.4 26 346-371 76-107 (578)
209 1u0t_A Inorganic polyphosphate 23.2 68 0.0023 29.3 4.1 37 11-48 4-41 (307)
210 1ks9_A KPA reductase;, 2-dehyd 23.0 54 0.0018 29.2 3.4 32 12-49 1-32 (291)
211 3l3b_A ES1 family protein; ssg 23.0 1.4E+02 0.0047 26.2 5.9 37 12-50 24-65 (242)
212 3l18_A Intracellular protease 22.8 1.7E+02 0.0059 23.4 6.3 37 11-49 2-38 (168)
213 4h1h_A LMO1638 protein; MCCF-l 22.7 1.3E+02 0.0045 27.7 6.0 29 267-295 62-90 (327)
214 1zu4_A FTSY; GTPase, signal re 22.7 4.3E+02 0.015 23.9 10.0 41 11-52 105-145 (320)
215 3q0i_A Methionyl-tRNA formyltr 22.6 1.3E+02 0.0044 27.6 5.9 36 10-51 6-41 (318)
216 1z82_A Glycerol-3-phosphate de 22.5 56 0.0019 30.1 3.4 32 11-48 14-45 (335)
217 1oi4_A Hypothetical protein YH 22.3 1.9E+02 0.0066 23.9 6.6 40 9-50 21-60 (193)
218 2vo1_A CTP synthase 1; pyrimid 22.1 85 0.0029 28.1 4.2 41 10-51 21-64 (295)
219 2hy5_A Putative sulfurtransfer 22.1 1.2E+02 0.0042 23.4 4.9 34 15-49 5-41 (130)
220 3ih5_A Electron transfer flavo 22.0 92 0.0031 26.8 4.5 37 13-49 5-45 (217)
221 1zl0_A Hypothetical protein PA 21.0 1.9E+02 0.0065 26.4 6.6 75 265-372 62-138 (311)
222 3ius_A Uncharacterized conserv 21.0 93 0.0032 27.5 4.5 33 11-49 5-37 (286)
223 3tqq_A Methionyl-tRNA formyltr 20.8 2.6E+02 0.0087 25.5 7.5 114 274-430 71-186 (314)
224 3hr8_A Protein RECA; alpha and 20.7 4.9E+02 0.017 24.1 9.5 40 13-53 63-102 (356)
225 3jx9_A Putative phosphoheptose 20.6 76 0.0026 26.2 3.4 33 13-49 80-113 (170)
226 2wm1_A 2-amino-3-carboxymucona 20.6 41 0.0014 31.0 2.0 46 242-290 127-175 (336)
227 3k96_A Glycerol-3-phosphate de 20.6 51 0.0018 30.9 2.7 33 11-49 29-61 (356)
228 3f1l_A Uncharacterized oxidore 20.6 1.4E+02 0.0048 25.9 5.6 34 11-48 11-44 (252)
229 3ic5_A Putative saccharopine d 20.5 81 0.0028 23.2 3.5 32 11-48 5-37 (118)
230 4gbj_A 6-phosphogluconate dehy 20.5 84 0.0029 28.5 4.1 30 12-47 6-35 (297)
231 3q9l_A Septum site-determining 20.5 95 0.0033 26.9 4.4 38 12-50 2-41 (260)
232 4imr_A 3-oxoacyl-(acyl-carrier 20.4 3.9E+02 0.013 23.3 8.7 34 12-49 33-66 (275)
233 3kkl_A Probable chaperone prot 20.3 1.7E+02 0.0056 25.6 5.9 38 11-49 3-51 (244)
234 2raf_A Putative dinucleotide-b 20.1 79 0.0027 26.8 3.7 33 10-48 18-50 (209)
235 2bon_A Lipid kinase; DAG kinas 20.1 1E+02 0.0034 28.4 4.6 41 8-49 26-66 (332)
236 3l4b_C TRKA K+ channel protien 20.1 32 0.0011 29.5 1.1 32 12-49 1-32 (218)
237 3ip0_A 2-amino-4-hydroxy-6-hyd 20.0 1.2E+02 0.0041 24.6 4.5 29 256-284 2-30 (158)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8e-65 Score=507.69 Aligned_cols=408 Identities=27% Similarity=0.429 Sum_probs=323.9
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCC--CEEEEEeCCCCCCCCCCCchhhhhhhc---CCCCeeEEeCCCCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHN--FLVSIFIPTIDDGTGSFMQPQRQVLES---LPTSISTIFLPPVSLDDL 85 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~G--H~Vt~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~l~~~~~~~~ 85 (462)
++||+++|+|++||++||+.||+.|+++ | |.|||++++.+.. ..... ..++++|..+++.-..+.
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~---------~~~~~~~~~~~~i~~~~ipdglp~~~ 82 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTND---------TLFSRSNEFLPNIKYYNVHDGLPKGY 82 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHH---------HSCSSSSCCCTTEEEEECCCCCCTTC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHH---------hhhcccccCCCCceEEecCCCCCCCc
Confidence 6799999999999999999999999998 9 9999999863221 11111 134699999874322221
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhcc--CCccEEEeCCCcchHHHHHHHcCCccccccC----------------
Q 012513 86 PDNVPIETRIILTLVRSLSSLRDALKVLTES--TRLVALVVDCFGSAAFDVANELDVKFNCEYR---------------- 147 (462)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~--~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~---------------- 147 (462)
....+....+..++....+.+++.+++++++ .++||||+|.+++|+..+|+++||+....+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 83 VSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 1111222333344445556677777776543 4789999999999999999999991111000
Q ss_pred --------CCCCCcc-CCCCCcCCCCCCCCchh-hhchHHHHHHHHHHHhhccccEEEEcchhhhcchHHHHhhcccCCC
Q 012513 148 --------DMPEPVQ-LPGCVPVHGRDFIEPVQ-QRKNKAYRFLLSFRKQYHLAAGIMVNSFMELETGPFKALMEGESSF 217 (462)
Q Consensus 148 --------~~~~~~~-~p~~~p~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~ 217 (462)
.....+. +||++++..++++..+. +.....+..+.+..+...+.+++++||++++|..+..++++.
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~---- 238 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK---- 238 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT----
T ss_pred hhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc----
Confidence 0112233 78888888778877654 333334555666677788889999999999999988888763
Q ss_pred CCCCeEeeccCcCCCCCC-CCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCccc
Q 012513 218 NPPPVYPVGPLIQTGSTN-ETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEE 296 (462)
Q Consensus 218 ~~p~v~~vGpl~~~~~~~-~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~ 296 (462)
.|++++|||++...... ...+ ++|.+||+.++++++|||||||+...+.+++.+++.+|+..+++|||+++....
T Consensus 239 -~~~v~~vGPl~~~~~~~~~~~~--~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~- 314 (454)
T 3hbf_A 239 -FKLLLNVGPFNLTTPQRKVSDE--HGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPK- 314 (454)
T ss_dssp -SSCEEECCCHHHHSCCSCCCCT--TCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHH-
T ss_pred -CCCEEEECCcccccccccccch--HHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch-
Confidence 36899999998643322 2223 789999999888899999999998888999999999999999999999987532
Q ss_pred ccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccch
Q 012513 297 AANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQ 376 (462)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ 376 (462)
..+|++|.++.+++..+ .+|+||.++|+|++|++|||||||||++||+++|||||++|+++||
T Consensus 315 ----------------~~lp~~~~~~~~~~~~v-v~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ 377 (454)
T 3hbf_A 315 ----------------EKLPKGFLERTKTKGKI-VAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQ 377 (454)
T ss_dssp ----------------HHSCTTHHHHTTTTEEE-ESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred ----------------hcCCHhHHhhcCCceEE-EeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccH
Confidence 34788888887765554 4999999999999999999999999999999999999999999999
Q ss_pred hhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhc
Q 012513 377 KMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKN 456 (462)
Q Consensus 377 ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 456 (462)
+.||+++++.+|+|+.+.... +++++|+++|+++|++++|++||+||+++++.+++++++||||++++++|++++.+
T Consensus 378 ~~Na~~v~~~~g~Gv~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 378 GLNTILTESVLEIGVGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp HHHHHHHHTTSCSEEECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhCeeEEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 999999998569999998665 99999999999999987788999999999999999999999999999999999853
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.8e-64 Score=510.78 Aligned_cols=434 Identities=56% Similarity=0.971 Sum_probs=325.5
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCC--CCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTID--DGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDN 88 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 88 (462)
++||+++|+|++||++|+++||++|++|+||+|||++++.. .. .........+.+++|+.++.....+....
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~------~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 79 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSK------AQRTVLDSLPSSISSVFLPPVDLTDLSSS 79 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-------CHHHHHC-CCTTEEEEECCCCCCTTSCTT
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhh------hhhhhccccCCCceEEEcCCCCCCCCCCc
Confidence 57999999999999999999999998744999999998863 33 22221122235799999886432222111
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhccCCc-cEEEeCCCcchHHHHHHHcCCccccccCC-------------------
Q 012513 89 VPIETRIILTLVRSLSSLRDALKVLTESTRL-VALVVDCFGSAAFDVANELDVKFNCEYRD------------------- 148 (462)
Q Consensus 89 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~-D~vI~D~~~~~~~~vA~~lgI~~~~~~~~------------------- 148 (462)
......+........+.++++++++....++ ||||+|.++.|+..+|+++||+....+..
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (480)
T 2vch_A 80 TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVS 159 (480)
T ss_dssp CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCC
Confidence 1222223333444455666666665333478 99999999999999999999921110000
Q ss_pred -----CCCCccCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHhhccccEEEEcchhhhcchHHHHhhcccCCCCCCCeE
Q 012513 149 -----MPEPVQLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQYHLAAGIMVNSFMELETGPFKALMEGESSFNPPPVY 223 (462)
Q Consensus 149 -----~~~~~~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~ 223 (462)
...+..+|+++|+....++..+.++..+.+..+......+++..+++.|++++++..++..+.+. .+ ..|+++
T Consensus 160 ~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~-~~-~~~~v~ 237 (480)
T 2vch_A 160 CEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP-GL-DKPPVY 237 (480)
T ss_dssp SCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC-CT-TCCCEE
T ss_pred CcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc-cc-CCCcEE
Confidence 01123467777777666776655554455555556666677788999999999999988888762 21 136899
Q ss_pred eeccCcCCCCCC--CCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccc
Q 012513 224 PVGPLIQTGSTN--ETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANAT 301 (462)
Q Consensus 224 ~vGpl~~~~~~~--~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~ 301 (462)
+|||++...... ...+ .+|.+||++++++++|||||||+...+.+++.+++++|+.++++|||+++..... ....
T Consensus 238 ~vGpl~~~~~~~~~~~~~--~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~-~~~~ 314 (480)
T 2vch_A 238 PVGPLVNIGKQEAKQTEE--SECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI-ANSS 314 (480)
T ss_dssp ECCCCCCCSCSCC-------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS-TTTT
T ss_pred EEeccccccccccCccch--hHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc-cccc
Confidence 999998654221 2233 7899999998788999999999988889999999999999999999999864310 0000
Q ss_pred cccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhH
Q 012513 302 YFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAV 381 (462)
Q Consensus 302 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~ 381 (462)
+|..+........+|+++.++++++++++.+|+||.+||+|++|++|||||||||++||+++|||||++|+++||+.||+
T Consensus 315 ~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~ 394 (480)
T 2vch_A 315 YFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394 (480)
T ss_dssp TTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred ccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHH
Confidence 00000000111358999999998889888789999999999999999999999999999999999999999999999999
Q ss_pred Hh-hcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhc
Q 012513 382 LL-TDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKN 456 (462)
Q Consensus 382 rv-~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 456 (462)
++ ++ +|+|+.+...+++.+++++|+++|+++|+++++++||+||+++++.+++++++||+++.++++|++++++
T Consensus 395 ~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 395 LLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 97 57 9999999765334599999999999999877778999999999999999999999999999999999875
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.8e-58 Score=467.26 Aligned_cols=414 Identities=32% Similarity=0.592 Sum_probs=310.4
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCC--CC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDL--PD 87 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~ 87 (462)
++||+++|+|++||++|+++||++|++|+ ||+|||++++.+... .+....... ...+.+++|..++.....+. ..
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~-~~~~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~~ 86 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMP-FADSYIKSV-LASQPQIQLIDLPEVEPPPQELLK 86 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCC-CCHHHHHHH-HCSCTTEEEEECCCCCCCCGGGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchh-hhhhhhhhc-ccCCCCceEEECCCCCCCcccccC
Confidence 58999999999999999999999998755 999999999865420 011111111 22335799999986422111 01
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccc-------------cCCC-----
Q 012513 88 NVPIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCE-------------YRDM----- 149 (462)
Q Consensus 88 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~-------------~~~~----- 149 (462)
+. ... +...+....+.++++++++ ...++||||+|.++.|+..+|+++||+.... +...
T Consensus 87 ~~-~~~-~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (463)
T 2acv_A 87 SP-EFY-ILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163 (463)
T ss_dssp SH-HHH-HHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred Cc-cHH-HHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC
Confidence 11 111 3333444555566666654 3368999999999999999999999921110 1100
Q ss_pred ---CC----CccCCCC-CcCCCCCCCCchhhhchHHHHHHHHHHHhhccccEEEEcchhhhcchHHHHhhcccCCCCCCC
Q 012513 150 ---PE----PVQLPGC-VPVHGRDFIEPVQQRKNKAYRFLLSFRKQYHLAAGIMVNSFMELETGPFKALMEGESSFNPPP 221 (462)
Q Consensus 150 ---~~----~~~~p~~-~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~ 221 (462)
.. +..+|++ .++..++++..+.++ .+.+..+....+.+.+..++++|+++++|..+..++.+...+ .|+
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p--~~~ 240 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEK--IPP 240 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTT--SCC
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcccc--CCc
Confidence 01 2345776 665555565555545 445555556666677888999999999999988887764222 368
Q ss_pred eEeeccCcCCCC-CC-C---CCCCcchhhcccCCCCCCeEEEEEeCCCC-CCCHHHHHHHHHHHHhCCCceEEEEeCCcc
Q 012513 222 VYPVGPLIQTGS-TN-E---TNKRSPACLKWLDEQPSESVLFVCFGSGG-TLSQEQLNELALGLEMSGQRFLWVAKSPHE 295 (462)
Q Consensus 222 v~~vGpl~~~~~-~~-~---~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~-~~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 295 (462)
+++|||++.... .. . ..+ .+|.+||+..+++++|||||||.. ..+.+++.+++.+|+..+++|||+++.+.
T Consensus 241 v~~vGpl~~~~~~~~~~~~~~~~--~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~- 317 (463)
T 2acv_A 241 IYAVGPLLDLKGQPNPKLDQAQH--DLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK- 317 (463)
T ss_dssp EEECCCCCCSSCCCBTTBCHHHH--HHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG-
T ss_pred EEEeCCCcccccccccccccccc--hhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc-
Confidence 999999986532 10 1 122 678999999888899999999998 78888999999999999999999998631
Q ss_pred cccccccccccCCCCCCCCCChhHHHhh--CCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccc
Q 012513 296 EAANATYFSVQSMKDPLDFLPKGFLDRT--KGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY 373 (462)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~ 373 (462)
..+|+++.++. +++ +.+.+|+||.++|+|+++++|||||||||++||+++|||||++|++
T Consensus 318 -----------------~~l~~~~~~~~~~~~~-~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 318 -----------------KVFPEGFLEWMELEGK-GMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp -----------------GGSCTTHHHHHHHHCS-EEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred -----------------ccCChhHHHhhccCCC-EEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 12677777666 544 4556899999999999999999999999999999999999999999
Q ss_pred cchhhhhHHh-hcccceeEEee-ecCCc--ccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Q 012513 374 SEQKMNAVLL-TDDLKVSFRVK-VNENG--LVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQ 449 (462)
Q Consensus 374 ~DQ~~~a~rv-~~~~g~G~~~~-~~~~~--~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 449 (462)
.||+.||+++ ++ +|+|+.+. ..+.+ .+++++|.++|+++|+++ ++||+||+++++.+++++++||||++++++
T Consensus 380 ~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 380 AEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp TTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred hhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 9999999995 77 99999983 11112 489999999999999631 489999999999999999999999999999
Q ss_pred HHHHHhc
Q 012513 450 VAQRWKN 456 (462)
Q Consensus 450 ~~~~l~~ 456 (462)
|++++++
T Consensus 457 ~v~~~~~ 463 (463)
T 2acv_A 457 LIDDITG 463 (463)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999863
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9e-58 Score=461.00 Aligned_cols=409 Identities=27% Similarity=0.449 Sum_probs=298.8
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCE--EEEEeCCCCCCCCCCCchhhhhhhc----CCCCeeEEeCCCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFL--VSIFIPTIDDGTGSFMQPQRQVLES----LPTSISTIFLPPVSLDD 84 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~--Vt~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~l~~~~~~~ 84 (462)
++||+++|+|++||++|+++||++|++| ||+ |||++++... ...... .+.++.++.+++.-...
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~~---------~~~~~~~~~~~~~~i~~~~i~~glp~~ 76 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQSN---------ASIFHDSMHTMQCNIKSYDISDGVPEG 76 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHH---------HHHC-------CTTEEEEECCCCCCTT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchhH---------HHhhccccccCCCceEEEeCCCCCCCc
Confidence 5799999999999999999999999988 765 5777765211 111111 12478888886421111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHhcc--CCccEEEeCCCcchHHHHHHHcCCccccccC---------------
Q 012513 85 LPDNVPIETRIILTLVRSLSSLRDALKVLTES--TRLVALVVDCFGSAAFDVANELDVKFNCEYR--------------- 147 (462)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~--~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~--------------- 147 (462)
..........+..+.....+.+++.++++.++ .++||||+|.++.|+..+|+++||+....+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 77 YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 10011122222223333335566666665432 5899999999999999999999992111000
Q ss_pred ----C-------CCCC-ccCCCCCcCCCCCCCCchh-hhchHHHHHH-HHHHHhhccccEEEEcchhhhcchHHHHhhcc
Q 012513 148 ----D-------MPEP-VQLPGCVPVHGRDFIEPVQ-QRKNKAYRFL-LSFRKQYHLAAGIMVNSFMELETGPFKALMEG 213 (462)
Q Consensus 148 ----~-------~~~~-~~~p~~~p~~~~~~~~~~~-~r~~~~~~~~-~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~ 213 (462)
. .... ..+|++.+....+++..+. ......+..+ .+........+++++|+++++|..+...+++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~ 236 (456)
T 2c1x_A 157 REKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 236 (456)
T ss_dssp HHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH
T ss_pred HhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc
Confidence 0 0011 1245655444444444321 1111112222 22234456678899999999999877777663
Q ss_pred cCCCCCCCeEeeccCcCCCCCC-CCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012513 214 ESSFNPPPVYPVGPLIQTGSTN-ETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKS 292 (462)
Q Consensus 214 ~~~~~~p~v~~vGpl~~~~~~~-~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~ 292 (462)
.|++++|||++...... ...+ .+|.+||+..+++++|||||||....+.+++.+++.+|+..+.+|+|+++.
T Consensus 237 -----~~~~~~vGpl~~~~~~~~~~~~--~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 237 -----LKTYLNIGPFNLITPPPVVPNT--TGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp -----SSCEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred -----CCCEEEecCcccCcccccccch--hhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 26899999997643221 1222 568899998878899999999998778889999999999999999999986
Q ss_pred CcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeeccc
Q 012513 293 PHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPL 372 (462)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~ 372 (462)
... ..+|+++.++.++ |+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+
T Consensus 310 ~~~-----------------~~l~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 310 KAR-----------------VHLPEGFLEKTRG-YGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp GGG-----------------GGSCTTHHHHHTT-TEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cch-----------------hhCCHHHHhhcCC-ceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCC
Confidence 432 3478888777654 5556699999999999999999999999999999999999999999
Q ss_pred ccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 012513 373 YSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQ 452 (462)
Q Consensus 373 ~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 452 (462)
+.||+.||+++++.+|+|+.+...+ +++++|+++|+++|+|+++++||+||+++++.+++++++||||++++++|++
T Consensus 372 ~~dQ~~Na~~l~~~~g~g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~ 448 (456)
T 2c1x_A 372 FGDQRLNGRMVEDVLEIGVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVD 448 (456)
T ss_dssp STTHHHHHHHHHHTSCCEEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhCeEEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHH
Confidence 9999999999999349999997655 9999999999999999778899999999999999999999999999999999
Q ss_pred HHhcC
Q 012513 453 RWKNP 457 (462)
Q Consensus 453 ~l~~~ 457 (462)
++++.
T Consensus 449 ~~~~~ 453 (456)
T 2c1x_A 449 LVSKP 453 (456)
T ss_dssp HHTSC
T ss_pred HHHhc
Confidence 99764
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.5e-57 Score=461.98 Aligned_cols=415 Identities=27% Similarity=0.476 Sum_probs=297.3
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhc--C--CCCeeEEeCCCCCCCCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLES--L--PTSISTIFLPPVSLDDL 85 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~--~--~~~i~~~~l~~~~~~~~ 85 (462)
+++||+++|+|++||++|++.||++|++| ||+|||++++.+.. ........ . .++++|..+++.-....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~------~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~ 79 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHK------RLLKSRGPKAFDGFTDFNFESIPDGLTPME 79 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHH------HHC------------CEEEEEECCCCC---
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhh------hhccccccccccCCCceEEEECCCCCCCcc
Confidence 36799999999999999999999999998 99999999874432 11000000 0 13688888874211100
Q ss_pred --CCCCchHHHHHHHH-HHHHHHHHHHHHHHhc---cCCccEEEeCCCcchHHHHHHHcCCccccccCC-----------
Q 012513 86 --PDNVPIETRIILTL-VRSLSSLRDALKVLTE---STRLVALVVDCFGSAAFDVANELDVKFNCEYRD----------- 148 (462)
Q Consensus 86 --~~~~~~~~~l~~~~-~~~~~~~~~~l~~~~~---~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~----------- 148 (462)
.........+...+ ....+.++++++.+.. ..++||||+|.++.|+..+|+++||+.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 159 (482)
T 2pq6_A 80 GDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHF 159 (482)
T ss_dssp ------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTH
T ss_pred cccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHH
Confidence 00011122222222 3344566666766543 258999999999999999999999921110000
Q ss_pred -----C-CCC---------------c-cCCCCCcCCCCCCCCchhhh--chHHHHHHHHHHHhhccccEEEEcchhhhcc
Q 012513 149 -----M-PEP---------------V-QLPGCVPVHGRDFIEPVQQR--KNKAYRFLLSFRKQYHLAAGIMVNSFMELET 204 (462)
Q Consensus 149 -----~-~~~---------------~-~~p~~~p~~~~~~~~~~~~r--~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~ 204 (462)
. ..+ . .+|++.++....++..+... .......+..........+++++|+++++|.
T Consensus 160 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~ 239 (482)
T 2pq6_A 160 RSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELES 239 (482)
T ss_dssp HHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGH
T ss_pred HHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhH
Confidence 0 000 0 12222222222222222110 1112222333344556778899999999999
Q ss_pred hHHHHhhcccCCCCCCCeEeeccCcCC-CCC-----------C-CCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHH
Q 012513 205 GPFKALMEGESSFNPPPVYPVGPLIQT-GST-----------N-ETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQ 271 (462)
Q Consensus 205 ~~~~~l~~~~~~~~~p~v~~vGpl~~~-~~~-----------~-~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~ 271 (462)
.+...+++. .|++++|||++.. ... . ++.+ .+|.+||++.+++++|||||||....+.++
T Consensus 240 ~~~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 240 DVINALSST-----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKED--TECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp HHHHHHHTT-----CTTEEECCCHHHHHHTSTTGGGGCC-----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred HHHHHHHHh-----CCcEEEEcCCcccccccccccccccccccccccc--hHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 887777663 2689999999753 111 1 1122 568999999878899999999998788888
Q ss_pred HHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccc
Q 012513 272 LNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSH 351 (462)
Q Consensus 272 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~H 351 (462)
+.+++.+|+..+++|+|+++.... ......+|+++.++.++ |+.+.+|+||.++|+|++|++||||
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~~-------------~~~~~~l~~~~~~~~~~-~~~v~~~~pq~~~L~h~~~~~~vth 378 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDLV-------------IGGSVIFSSEFTNEIAD-RGLIASWCPQDKVLNHPSIGGFLTH 378 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGS-------------TTTGGGSCHHHHHHHTT-TEEEESCCCHHHHHTSTTEEEEEEC
T ss_pred HHHHHHHHHhcCCcEEEEEcCCcc-------------ccccccCcHhHHHhcCC-CEEEEeecCHHHHhcCCCCCEEEec
Confidence 999999999999999999985321 00012378888777754 5666689999999999999999999
Q ss_pred cCchhHHHHHHhCCceeecccccchhhhhHHhh-cccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 352 CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLT-DDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 352 GG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~-~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|||||++||+++|||||++|++.||+.||++++ + +|+|+.+. .+ +++++|.++|+++|+|+++++||+||++++
T Consensus 379 ~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~ 453 (482)
T 2pq6_A 379 CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAMELK 453 (482)
T ss_dssp CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 6 99999997 54 999999999999999976778999999999
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 431 DAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 431 ~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
+.+++++++|||+++++++|+++|++.
T Consensus 454 ~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 454 KKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1e-43 Score=353.95 Aligned_cols=349 Identities=18% Similarity=0.177 Sum_probs=217.8
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCC------
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSL------ 82 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------ 82 (462)
.+.|||+|+++|++||++|+++||++|++| ||+|||++++.+.. ..+ .++.+..+.....
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~------~~~-------~g~~~~~~~~~~~~~~~~~ 85 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRA------VAE-------AGLCAVDVSPGVNYAKLFV 85 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHH------HHT-------TTCEEEESSTTCCSHHHHS
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhh------HHh-------cCCeeEecCCchhHhhhcc
Confidence 457999999999999999999999999998 99999999875433 111 2455554432110
Q ss_pred CC---CCC----CCchHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCCCCccC
Q 012513 83 DD---LPD----NVPIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMPEPVQL 155 (462)
Q Consensus 83 ~~---~~~----~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~~~~~~ 155 (462)
.. ... .......+...+........+.+.+++++.+||+||+|.+++++..+|+.+||+........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~------ 159 (400)
T 4amg_A 86 PDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGP------ 159 (400)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSST------
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccc------
Confidence 00 000 00011111222222222222223333445589999999999999999999999322211100
Q ss_pred CCCCcCCCCCCCCchhhhchHHHHHHHHHHHhh-ccccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeeccCcCCCCC
Q 012513 156 PGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQY-HLAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVGPLIQTGST 234 (462)
Q Consensus 156 p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~ 234 (462)
. .....+.......+.....+.... ........... ........+ .....+......+......
T Consensus 160 -------~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 224 (400)
T 4amg_A 160 -------A-DSEPGLGALIRRAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLP--EDRRSPGAWPMRYVPYNGG- 224 (400)
T ss_dssp -------T-TCCHHHHHHHHHHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSC--GGGCCTTCEECCCCCCCCC-
T ss_pred -------c-ccccchhhHHHHHHHHHHHHhCCCcccccchhhccc----CchhhccCc--ccccCCcccCccccccccc-
Confidence 0 000011111111111111111100 11111111111 111111100 0001123333333222111
Q ss_pred CCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCC--HHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCC
Q 012513 235 NETNKRSPACLKWLDEQPSESVLFVCFGSGGTLS--QEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPL 312 (462)
Q Consensus 235 ~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~--~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (462)
..+.+|++..+++++|||||||+.... .+.+.++++++++.+.+++|..++... +..
T Consensus 225 -------~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~--------------~~~ 283 (400)
T 4amg_A 225 -------AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL--------------ALL 283 (400)
T ss_dssp -------EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC--------------CCC
T ss_pred -------ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc--------------ccc
Confidence 455679988888899999999975433 456888999999999999999876543 233
Q ss_pred CCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEE
Q 012513 313 DFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFR 392 (462)
Q Consensus 313 ~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~ 392 (462)
..+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++|||+|++|++.||+.||+++++ +|+|+.
T Consensus 284 ~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~ 351 (400)
T 4amg_A 284 GELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFD 351 (400)
T ss_dssp CCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEE
T ss_pred ccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEE
Confidence 44555 788899999999999999 899999999999999999999999999999999999999 999999
Q ss_pred eeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHh
Q 012513 393 VKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAAN 435 (462)
Q Consensus 393 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 435 (462)
++..+ .++ ++|+++|+|+ +||+||+++++++++
T Consensus 352 l~~~~---~~~----~al~~lL~d~---~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 352 AEAGS---LGA----EQCRRLLDDA---GLREAALRVRQEMSE 384 (400)
T ss_dssp CCTTT---CSH----HHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred cCCCC---chH----HHHHHHHcCH---HHHHHHHHHHHHHHc
Confidence 98665 665 4677788884 999999999999996
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.5e-42 Score=346.79 Aligned_cols=378 Identities=16% Similarity=0.169 Sum_probs=250.6
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCC-C-C
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDL-P-D 87 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~-~ 87 (462)
++|||+++++|++||++|++.||++|+++ ||+|+|++++.+.+ .... .+++++.++....... . .
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~------~~~~------~g~~~~~~~~~~~~~~~~~~ 77 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAA------QVKA------AGATPVVYDSILPKESNPEE 77 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHH------HHHH------HTCEEEECCCCSCCTTCTTC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHH------HHHh------CCCEEEecCccccccccchh
Confidence 46899999999999999999999999988 99999999875433 1211 1577777764311111 0 0
Q ss_pred -CCchHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCC-CC-c-c-----CCCC
Q 012513 88 -NVPIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMP-EP-V-Q-----LPGC 158 (462)
Q Consensus 88 -~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~-~~-~-~-----~p~~ 158 (462)
.......+...+......+.+.+.+++++.+||+||+|.+++|+..+|+++||+......... .. . . .+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPT 157 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCC
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccc
Confidence 011112222222222333444556666677999999999988999999999993322221110 00 0 0 0010
Q ss_pred C--------cCCCCCCCCch------hhhchHHHHHHHHHH-------HhhccccEEEEcchhhhcchHHHHhhcccCCC
Q 012513 159 V--------PVHGRDFIEPV------QQRKNKAYRFLLSFR-------KQYHLAAGIMVNSFMELETGPFKALMEGESSF 217 (462)
Q Consensus 159 ~--------p~~~~~~~~~~------~~r~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~ 217 (462)
. +... ...... .+.....+..+.... ......+..+.++..+++.... .
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~----~----- 227 (424)
T 2iya_A 158 ADRGEEAAAPAGT-GDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGD----T----- 227 (424)
T ss_dssp C----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGG----G-----
T ss_pred ccccccccccccc-ccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCcc----C-----
Confidence 0 0000 000000 000000111111110 0001334566666666665421 1
Q ss_pred CCCCeEeeccCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccc
Q 012513 218 NPPPVYPVGPLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEA 297 (462)
Q Consensus 218 ~~p~v~~vGpl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~ 297 (462)
..+++++|||+.... .+..+|++..+++++|||+|||......+.+.+++++++..+.+++|.++....
T Consensus 228 ~~~~~~~vGp~~~~~---------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-- 296 (424)
T 2iya_A 228 VGDNYTFVGPTYGDR---------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD-- 296 (424)
T ss_dssp CCTTEEECCCCCCCC---------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC--
T ss_pred CCCCEEEeCCCCCCc---------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC--
Confidence 125799999975421 223468776556789999999987666788999999999888899998875421
Q ss_pred cccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchh
Q 012513 298 ANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQK 377 (462)
Q Consensus 298 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~ 377 (462)
.+.+..+| +|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|...||+
T Consensus 297 -----------~~~~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 354 (424)
T 2iya_A 297 -----------PADLGEVP---------PNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQT 354 (424)
T ss_dssp -----------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred -----------hHHhccCC---------CCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCccchH
Confidence 00111233 3788889999999999999 8999999999999999999999999999999
Q ss_pred hhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 012513 378 MNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRW 454 (462)
Q Consensus 378 ~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 454 (462)
.||+++++ .|+|+.+...+ ++.++|.++|+++++|+ +||++++++++.+++ .++..+.++.+.+.+
T Consensus 355 ~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 355 MNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCcHHHHHHHHHHHH
Confidence 99999999 99999987665 89999999999999984 899999999999985 455555555554443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-40 Score=329.96 Aligned_cols=377 Identities=13% Similarity=0.131 Sum_probs=232.2
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCC-CCc
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPD-NVP 90 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-~~~ 90 (462)
|||++++.|+.||++|+++||++|+++ ||+|+|++++.+.. .... .+++++.++......+.. ...
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~~~----------~v~~--~g~~~~~i~~~~~~~~~~~~~~ 67 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAE----------RLAE--VGVPHVPVGPSARAPIQRAKPL 67 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHH----------HHHH--TTCCEEECCC-------CCSCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHHHH----------HHHH--cCCeeeeCCCCHHHHhhccccc
Confidence 799999999999999999999999998 99999999875322 1111 267777776532111100 001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-cCCccEEEeCC-Ccch--HHHHHHHcCCccccccCCC-C-CCccCCCCCcCCCC
Q 012513 91 IETRIILTLVRSLSSLRDALKVLTE-STRLVALVVDC-FGSA--AFDVANELDVKFNCEYRDM-P-EPVQLPGCVPVHGR 164 (462)
Q Consensus 91 ~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~D~vI~D~-~~~~--~~~vA~~lgI~~~~~~~~~-~-~~~~~p~~~p~~~~ 164 (462)
....+...+. ....+.++++.+ ..+||+||+|. +.+| +..+|+++||+........ . ....+|... .. .
T Consensus 68 ~~~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~-~~-~ 142 (415)
T 1iir_A 68 TAEDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPP-LG-E 142 (415)
T ss_dssp CHHHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC-----
T ss_pred chHHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCcc-CC-c
Confidence 1111111111 122334444432 46899999998 6777 7889999999332221110 0 001111110 00 0
Q ss_pred CCCCc-hhhhc-----hHH-HHHHHHHHHhhccccEEE-EcchhhhcchHHHHhhcccCCCCC-----CCeEeeccCcCC
Q 012513 165 DFIEP-VQQRK-----NKA-YRFLLSFRKQYHLAAGIM-VNSFMELETGPFKALMEGESSFNP-----PPVYPVGPLIQT 231 (462)
Q Consensus 165 ~~~~~-~~~r~-----~~~-~~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~l~~~~~~~~~-----p~v~~vGpl~~~ 231 (462)
.++.. ...+. ... +..+....+.+....++- .+++.++.... ..+.++++.+.+ .++++|||+...
T Consensus 143 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~~~~~~vG~~~~~ 221 (415)
T 1iir_A 143 PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQPTDLDAVQTGAWILP 221 (415)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCCCSSCCEECCCCCCC
T ss_pred cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCCcccCCeEeeCCCccC
Confidence 01010 11110 000 000111111111111110 01111110000 111122222211 178999998765
Q ss_pred CCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCC
Q 012513 232 GSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDP 311 (462)
Q Consensus 232 ~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 311 (462)
.. ...+ .++.+|+++.+ ++|||+|||.. ...+.++.++++++..+.+++|+++.... .
T Consensus 222 ~~--~~~~--~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~--------------~- 279 (415)
T 1iir_A 222 DE--RPLS--PELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL--------------V- 279 (415)
T ss_dssp CC--CCCC--HHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC--------------C-
T ss_pred cc--cCCC--HHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcc--------------c-
Confidence 33 2233 78899997653 59999999976 56778888999999999999998875432 1
Q ss_pred CCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeE
Q 012513 312 LDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSF 391 (462)
Q Consensus 312 ~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~ 391 (462)
...+|+ |+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.||.++++ .|+|+
T Consensus 280 ~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~ 347 (415)
T 1iir_A 280 LPDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGV 347 (415)
T ss_dssp CSSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEE
T ss_pred ccCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcc
Confidence 122333 788899999999998888 999999999999999999999999999999999999999 99999
Q ss_pred EeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 012513 392 RVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQ 452 (462)
Q Consensus 392 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 452 (462)
.+...+ ++.++|.++|+++ +| ++||++++++++.+++ .++..+.++.+.+
T Consensus 348 ~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 397 (415)
T 1iir_A 348 AHDGPI---PTFDSLSAALATA-LT---PETHARATAVAGTIRT----DGAAVAARLLLDA 397 (415)
T ss_dssp ECSSSS---CCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSCS----CHHHHHHHHHHHH
T ss_pred cCCcCC---CCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHhh----cChHHHHHHHHHH
Confidence 987665 8999999999999 87 4999999999988763 3444444444333
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.2e-39 Score=324.49 Aligned_cols=370 Identities=12% Similarity=0.039 Sum_probs=235.7
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCC---CC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLP---DN 88 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~---~~ 88 (462)
|||++++.++.||++|+++||++|+++ ||+|+|++++.+.. .... .++++..++........ .+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~~~------~v~~------~g~~~~~~~~~~~~~~~~~~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEE------RLAE------VGVPHVPVGLPQHMMLQEGMPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHH------HHHH------HTCCEEECSCCGGGCCCTTSCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHH------HHHH------cCCeeeecCCCHHHHHhhcccc
Confidence 799999999999999999999999998 99999999874332 1111 25777777643211111 11
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhc-cCCccEEEeCC-Ccch--HHHHHHHcCCccccccCCC-CC-CccCC-CCCcC
Q 012513 89 VPIETRIILTLVRSLSSLRDALKVLTE-STRLVALVVDC-FGSA--AFDVANELDVKFNCEYRDM-PE-PVQLP-GCVPV 161 (462)
Q Consensus 89 ~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~D~vI~D~-~~~~--~~~vA~~lgI~~~~~~~~~-~~-~~~~p-~~~p~ 161 (462)
.. ...+...+... ..+.++.+.+ ..+||+||+|. +.++ +..+|+.+||+........ .. ...+| .+ ++
T Consensus 68 ~~-~~~~~~~~~~~---~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~~~-~~ 142 (416)
T 1rrv_A 68 PP-PEEEQRLAAMT---VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAY-DE 142 (416)
T ss_dssp CC-HHHHHHHHHHH---HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCB-CS
T ss_pred ch-hHHHHHHHHHH---HHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCCCC-CC
Confidence 11 11122222222 1233333321 45899999997 4566 7789999999332211110 00 00111 11 00
Q ss_pred CC-CC-CCCchhhh-chHH-HHHHHHHHHhhcccc---------------EEEEcchhhhcchHHHHhhcccCCCCCCCe
Q 012513 162 HG-RD-FIEPVQQR-KNKA-YRFLLSFRKQYHLAA---------------GIMVNSFMELETGPFKALMEGESSFNPPPV 222 (462)
Q Consensus 162 ~~-~~-~~~~~~~r-~~~~-~~~~~~~~~~~~~~~---------------~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v 222 (462)
+. .. ....+..+ .... +..+....+.+.... .++.++..+++.. .. .. ++
T Consensus 143 ~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~---------~~-~~-~~ 211 (416)
T 1rrv_A 143 PTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPL---------QP-DV-DA 211 (416)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCC---------CS-SC-CC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCCCeEEccCccccCC---------CC-CC-Ce
Confidence 00 00 11111000 0000 000111111111100 1222333222221 00 11 78
Q ss_pred EeeccCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCC-CCHHHHHHHHHHHHhCCCceEEEEeCCcccccccc
Q 012513 223 YPVGPLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGT-LSQEQLNELALGLEMSGQRFLWVAKSPHEEAANAT 301 (462)
Q Consensus 223 ~~vGpl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~ 301 (462)
+++||+..... ...+ .++.+|+++.+ ++|||+|||... ...+.+.+++++++..+.+++|+++....
T Consensus 212 ~~vG~~~~~~~--~~~~--~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~------ 279 (416)
T 1rrv_A 212 VQTGAWLLSDE--RPLP--PELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTEL------ 279 (416)
T ss_dssp EECCCCCCCCC--CCCC--HHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTC------
T ss_pred eeECCCccCcc--CCCC--HHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccc------
Confidence 99999876532 2223 78889997653 599999999753 34567888999999999999999876432
Q ss_pred cccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhH
Q 012513 302 YFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAV 381 (462)
Q Consensus 302 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~ 381 (462)
+ ...+|+ |+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.||+
T Consensus 280 --------~-~~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 339 (416)
T 1rrv_A 280 --------V-LPDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAG 339 (416)
T ss_dssp --------C-CSCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHH
T ss_pred --------c-ccCCCC---------CEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHH
Confidence 1 122333 788889999999998888 99999999999999999999999999999999999
Q ss_pred HhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHh
Q 012513 382 LLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWK 455 (462)
Q Consensus 382 rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 455 (462)
++++ .|+|+.+...+ .+.++|.++|+++ .| ++||++++++++.+++ .++. +.++.+++++.
T Consensus 340 ~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 340 RVAA-LGIGVAHDGPT---PTFESLSAALTTV-LA---PETRARAEAVAGMVLT----DGAA-AAADLVLAAVG 400 (416)
T ss_dssp HHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHH
T ss_pred HHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHh
Confidence 9999 99999987665 8999999999999 88 4999999999887773 4444 55555524443
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=7e-38 Score=313.43 Aligned_cols=379 Identities=14% Similarity=0.107 Sum_probs=245.5
Q ss_pred CCCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCC
Q 012513 6 SKQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDL 85 (462)
Q Consensus 6 ~~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 85 (462)
.+.+.||||+|+++++.||++|++.||++|+++ ||+|+|++++.+.+ .. .. .++.+..++.......
T Consensus 15 ~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~~~------~~----~~--~G~~~~~~~~~~~~~~ 81 (415)
T 3rsc_A 15 IEGRHMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAE------PV----RA--AGATVVPYQSEIIDAD 81 (415)
T ss_dssp ----CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHH------HH----HH--TTCEEEECCCSTTTCC
T ss_pred cCcccCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHHHH------HH----Hh--cCCEEEeccccccccc
Confidence 345668999999999999999999999999988 99999999764433 11 11 2677877764311100
Q ss_pred C----CCCchHHHHHH-HHHHHHHHHHHHHHHHhccCCccEEEeC-CCcchHHHHHHHcCCccccccCCCCCCccCCCCC
Q 012513 86 P----DNVPIETRIIL-TLVRSLSSLRDALKVLTESTRLVALVVD-CFGSAAFDVANELDVKFNCEYRDMPEPVQLPGCV 159 (462)
Q Consensus 86 ~----~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~D~vI~D-~~~~~~~~vA~~lgI~~~~~~~~~~~~~~~p~~~ 159 (462)
. ........+.. ..... ..+...+.+++++.+||+||+| ...+++..+|+++||+........... ..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~---~~~~ 157 (415)
T 3rsc_A 82 AAEVFGSDDLGVRPHLMYLREN-VSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN---EHYS 157 (415)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHH-HHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC---SSCC
T ss_pred cchhhccccHHHHHHHHHHHHH-HHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc---Cccc
Confidence 0 00011111222 22222 2233444555677899999999 778888889999999433322211110 0110
Q ss_pred c------CCCCCCCCchhhhchHHHHHHHHHHH------h-hccc-cEEEEcchhhhcchHHHHhhcccCCCCCCCeEee
Q 012513 160 P------VHGRDFIEPVQQRKNKAYRFLLSFRK------Q-YHLA-AGIMVNSFMELETGPFKALMEGESSFNPPPVYPV 225 (462)
Q Consensus 160 p------~~~~~~~~~~~~r~~~~~~~~~~~~~------~-~~~~-~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~v 225 (462)
+ ......+. .+......+..+..... . .... +..+......++.. . .. ...++.++
T Consensus 158 ~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~---~~-~~~~~~~v 227 (415)
T 3rsc_A 158 FSQDMVTLAGTIDPL-DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----G---DT-FDDRFVFV 227 (415)
T ss_dssp HHHHHHHHHTCCCGG-GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----G---GG-CCTTEEEC
T ss_pred cccccccccccCChh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----c---cc-CCCceEEe
Confidence 0 00000000 11111111111111110 0 0000 22222222222111 0 00 12369999
Q ss_pred ccCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccc
Q 012513 226 GPLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSV 305 (462)
Q Consensus 226 Gpl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~ 305 (462)
||+.... .+...|....+++++|||++||......+.+..++++++..+.+++|..+....
T Consensus 228 Gp~~~~~---------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~---------- 288 (415)
T 3rsc_A 228 GPCFDDR---------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD---------- 288 (415)
T ss_dssp CCCCCCC---------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC----------
T ss_pred CCCCCCc---------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC----------
Confidence 9876432 233457655556779999999987767788999999999999888888875421
Q ss_pred cCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhc
Q 012513 306 QSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTD 385 (462)
Q Consensus 306 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~ 385 (462)
.+.+..++ .|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|++|...||+.||.++++
T Consensus 289 ---~~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~ 354 (415)
T 3rsc_A 289 ---PAALGDLP---------PNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ 354 (415)
T ss_dssp ---GGGGCCCC---------TTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH
T ss_pred ---hHHhcCCC---------CcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH
Confidence 01122233 3788889999999999999 899999999999999999999999999999999999999
Q ss_pred ccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHh
Q 012513 386 DLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWK 455 (462)
Q Consensus 386 ~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 455 (462)
.|+|+.+...+ ++.++|.++|+++++|+ +++++++++++.+.+ .++..+.++.+.+.+.
T Consensus 355 -~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 355 -LGLGAVLPGEK---ADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAVEAYLA 413 (415)
T ss_dssp -HTCEEECCGGG---CCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHH
T ss_pred -cCCEEEcccCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhh
Confidence 99999998776 89999999999999994 999999999999985 5556666666655443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3e-39 Score=322.16 Aligned_cols=369 Identities=13% Similarity=0.082 Sum_probs=236.0
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCC--CC--CC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLD--DL--PD 87 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~--~~--~~ 87 (462)
|||+|++.+++||++|++.||++|+++ ||+|+|++++.+.+ .. .. .++.+..++..... .. ..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~~~------~v----~~--~g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVE------RC----AE--VGVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHH------HH----HH--TTCCEEECSSCSSGGGSCTTCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHH------HH----HH--cCCceeecCCCHHHHhccccCC
Confidence 789999999999999999999999988 99999999875433 22 21 25777777643210 00 01
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchH---HHHHHHcCCccccccCCCCCCccCCCCCcCCCC
Q 012513 88 NVPIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAA---FDVANELDVKFNCEYRDMPEPVQLPGCVPVHGR 164 (462)
Q Consensus 88 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~---~~vA~~lgI~~~~~~~~~~~~~~~p~~~p~~~~ 164 (462)
.......+ ........+.+.+++ .++|+||+|.....+ ..+|+++||+....+... ...|. +
T Consensus 68 ~~~~~~~~----~~~~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p---~~~~~----~-- 132 (404)
T 3h4t_A 68 PPGAAEVV----TEVVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSP---DHLPS----E-- 132 (404)
T ss_dssp CTTCGGGH----HHHHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG---GGSGG----G--
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCC---ccCCC----h--
Confidence 11111111 111222222223332 279999998765554 578999999433322111 00111 0
Q ss_pred CCCCchhh-hchHHHHHHHHHHHhhccccEEE-Ecchhhh--cc----hHHHHhhcccCCCCCCCeEeeccCcCCCCCCC
Q 012513 165 DFIEPVQQ-RKNKAYRFLLSFRKQYHLAAGIM-VNSFMEL--ET----GPFKALMEGESSFNPPPVYPVGPLIQTGSTNE 236 (462)
Q Consensus 165 ~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~l-~~s~~~l--~~----~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~~~ 236 (462)
.. ...+. +....+..+....+......++. .....+. .. .+...+.+.+ + ..+++.++|++..+.. .
T Consensus 133 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~-~-~~~~~~~~G~~~~~~~--~ 207 (404)
T 3h4t_A 133 QS-QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR-P-TDLGTVQTGAWILPDQ--R 207 (404)
T ss_dssp SC-HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC-T-TCCSCCBCCCCCCCCC--C
T ss_pred hH-HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC-C-CCCCeEEeCccccCCC--C
Confidence 00 11111 11111112211122111111110 0000000 00 0000111111 1 1247889998765432 2
Q ss_pred CCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCC
Q 012513 237 TNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLP 316 (462)
Q Consensus 237 ~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 316 (462)
..+ +++.+|++.. +++|||+|||+.. ..+.+..++++++..+.++||+.+.... +. ..++
T Consensus 208 ~~~--~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~--------------~~-~~~~ 267 (404)
T 3h4t_A 208 PLS--AELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGL--------------GR-IDEG 267 (404)
T ss_dssp CCC--HHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTC--------------CC-SSCC
T ss_pred CCC--HHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccc--------------cc-ccCC
Confidence 233 7888899754 4599999999866 6778899999999999999998876432 01 1122
Q ss_pred hhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeec
Q 012513 317 KGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVN 396 (462)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~ 396 (462)
+|+.+.+|+||.++|++++ +||||||+||+.||+++|||+|++|+..||+.||.++++ .|+|+.+...
T Consensus 268 ---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~ 335 (404)
T 3h4t_A 268 ---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGP 335 (404)
T ss_dssp ---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSS
T ss_pred ---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCcC
Confidence 3788889999999999988 999999999999999999999999999999999999999 9999999876
Q ss_pred CCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 397 ENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 397 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
+ ++.++|.++|+++++ + +|+++++++++.+. . .+..+.++.+.+.++..
T Consensus 336 ~---~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 336 T---PTVESLSAALATALT-P---GIRARAAAVAGTIR----T-DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp S---CCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHHC-
T ss_pred C---CCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHhhC
Confidence 6 899999999999997 5 89999999998777 3 45666666666655543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.6e-36 Score=300.48 Aligned_cols=377 Identities=15% Similarity=0.153 Sum_probs=242.2
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCC--CC--C
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLD--DL--P 86 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~--~~--~ 86 (462)
||||+++++++.||++|++.||++|+++ ||+|+|++++.+.+ .... .++.+..++..... .. .
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~~~----------~~~~--~G~~~~~~~~~~~~~~~~~~~ 70 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFAD----------EVKA--AGAEVVLYKSEFDTFHVPEVV 70 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHH----------HHHH--TTCEEEECCCGGGTSSSSSSS
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHHHH----------HHHH--cCCEEEecccccccccccccc
Confidence 4599999999999999999999999988 99999999764332 1121 25777776532110 00 1
Q ss_pred CCCchHHHHHH-HHHHHHHHHHHHHHHHhccCCccEEEeC-CCcchHHHHHHHcCCccccccCCCCCCccCC---CCCcC
Q 012513 87 DNVPIETRIIL-TLVRSLSSLRDALKVLTESTRLVALVVD-CFGSAAFDVANELDVKFNCEYRDMPEPVQLP---GCVPV 161 (462)
Q Consensus 87 ~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~D~vI~D-~~~~~~~~vA~~lgI~~~~~~~~~~~~~~~p---~~~p~ 161 (462)
........+.. ..... ......+.+++++.+||+||+| .+.+++..+|+++||+..............+ ...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 149 (402)
T 3ia7_A 71 KQEDAETQLHLVYVREN-VAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKS 149 (402)
T ss_dssp CCTTHHHHHHHHHHHHH-HHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHH
T ss_pred cccchHHHHHHHHHHHH-HHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccccc
Confidence 11122333322 22222 2223344555567799999999 7888888899999994333221111000000 00000
Q ss_pred CCCCCCCchhhhchHHHHHHHHHHH------hh-ccc-cEEEEcchhhhcchHHHHhhcccCCCCCCCeEeeccCcCCCC
Q 012513 162 HGRDFIEPVQQRKNKAYRFLLSFRK------QY-HLA-AGIMVNSFMELETGPFKALMEGESSFNPPPVYPVGPLIQTGS 233 (462)
Q Consensus 162 ~~~~~~~~~~~r~~~~~~~~~~~~~------~~-~~~-~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vGpl~~~~~ 233 (462)
.....+. .+......+..+..... .+ ... +..+...-..++.. . .. ...++.++||+....
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~---~~-~~~~~~~vGp~~~~~- 218 (402)
T 3ia7_A 150 NGQRHPA-DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----A---ET-FDERFAFVGPTLTGR- 218 (402)
T ss_dssp HTCCCGG-GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----G---GG-CCTTEEECCCCCCC--
T ss_pred ccccChh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----c---cc-CCCCeEEeCCCCCCc-
Confidence 0000000 00001111111111000 00 000 22222222222111 0 11 124699999876432
Q ss_pred CCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCC
Q 012513 234 TNETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLD 313 (462)
Q Consensus 234 ~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (462)
.+...|+...+++++|||++||......+.+..++++++..+.+++|..+.... .+.+.
T Consensus 219 --------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------------~~~~~ 277 (402)
T 3ia7_A 219 --------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD-------------PAVLG 277 (402)
T ss_dssp -----------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC-------------GGGGC
T ss_pred --------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC-------------hhhhC
Confidence 223356655556779999999987777778999999999988888888875421 01112
Q ss_pred CCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeeccc-ccchhhhhHHhhcccceeEE
Q 012513 314 FLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPL-YSEQKMNAVLLTDDLKVSFR 392 (462)
Q Consensus 314 ~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~-~~DQ~~~a~rv~~~~g~G~~ 392 (462)
.++ .|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|++|. ..||+.|+.++++ .|+|..
T Consensus 278 ~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~ 345 (402)
T 3ia7_A 278 PLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSV 345 (402)
T ss_dssp SCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEE
T ss_pred CCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEE
Confidence 233 3788899999999999999 89999999999999999999999999 9999999999999 999999
Q ss_pred eeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHh
Q 012513 393 VKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWK 455 (462)
Q Consensus 393 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 455 (462)
+...+ +++++|.++++++++|+ +++++++++++.+.+ .++..+..+.+.+.+.
T Consensus 346 ~~~~~---~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 346 LRPDQ---LEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp CCGGG---CSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred ccCCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 98765 89999999999999994 999999999999884 5666666666655554
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=7.9e-37 Score=308.27 Aligned_cols=371 Identities=12% Similarity=0.081 Sum_probs=227.8
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCC-CC---
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSL-DD--- 84 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~~--- 84 (462)
..+|||++++.++.||++|+++||++|+++ ||+|+|++++.+.. .+. ..++.++.++.... ..
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~~~----------~v~--~~G~~~~~i~~~~~~~~~~~ 84 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPALTE----------DIT--AAGLTAVPVGTDVDLVDFMT 84 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGGHH----------HHH--TTTCCEEECSCCCCHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchhHH----------HHH--hCCCceeecCCccchHHHhh
Confidence 457999999999999999999999999998 99999999864322 111 12678887765310 00
Q ss_pred ------------CC-----CCCchHHHHH---HHHHHH-H-----H-HHHHHHHHHhccCCccEEEeCCCcchHHHHHHH
Q 012513 85 ------------LP-----DNVPIETRII---LTLVRS-L-----S-SLRDALKVLTESTRLVALVVDCFGSAAFDVANE 137 (462)
Q Consensus 85 ------------~~-----~~~~~~~~l~---~~~~~~-~-----~-~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~ 137 (462)
.. .....+..+. ..+... . . .+.++ .+++++.+||+||+|.+++++..+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 85 HAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGM-VSFCRKWRPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp HTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHH-HHHHHHHCCSEEEECTTCTHHHHHHHH
T ss_pred hhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHH-HHHHHhcCCCEEEecCcchhHHHHHHH
Confidence 00 0000111111 111110 0 1 22222 223344599999999988888899999
Q ss_pred cCCccccccCCCCCCc-------cCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHh-hc-----cccEEEEcchhhhcc
Q 012513 138 LDVKFNCEYRDMPEPV-------QLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQ-YH-----LAAGIMVNSFMELET 204 (462)
Q Consensus 138 lgI~~~~~~~~~~~~~-------~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~-----~~~~~l~~s~~~l~~ 204 (462)
+||+............ ..+++.+. ...+++..+.+..+...+.. -. ..+..+.+....++.
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 237 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGLLPDQPE------EHREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRL 237 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHHGGGSCT------TTCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSC
T ss_pred cCCCEEEEecCCCcchhhhhhhhhhcccccc------ccccchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccC
Confidence 9994332221110000 00010000 00111222222222221110 00 001111111111111
Q ss_pred hHHHHhhcccCCCCCCCeEeeccCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCC---CHHHHHHHHHHHHh
Q 012513 205 GPFKALMEGESSFNPPPVYPVGPLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTL---SQEQLNELALGLEM 281 (462)
Q Consensus 205 ~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~---~~~~~~~i~~al~~ 281 (462)
. . +.|. ..+++.... .+ .++..|++..+++++|||++||.... ..+.+..++++++.
T Consensus 238 ~---------~--~~~~-~~~~~~~~~------~~--~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~ 297 (441)
T 2yjn_A 238 D---------T--GLKT-VGMRYVDYN------GP--SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGD 297 (441)
T ss_dssp C---------C--CCCE-EECCCCCCC------SS--CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHT
T ss_pred C---------C--CCCC-CceeeeCCC------CC--cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHc
Confidence 0 0 1110 122222111 11 45678998666678999999997543 33567788999998
Q ss_pred CCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHH
Q 012513 282 SGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESI 361 (462)
Q Consensus 282 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal 361 (462)
.+.+++|+.+.... +.+..+| +|+.+.+|+||.++|++++ +||||||+||++||+
T Consensus 298 ~~~~~v~~~g~~~~--------------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~V~~~G~~t~~Ea~ 352 (441)
T 2yjn_A 298 VDAEIIATFDAQQL--------------EGVANIP---------DNVRTVGFVPMHALLPTCA--ATVHHGGPGSWHTAA 352 (441)
T ss_dssp SSSEEEECCCTTTT--------------SSCSSCC---------SSEEECCSCCHHHHGGGCS--EEEECCCHHHHHHHH
T ss_pred CCCEEEEEECCcch--------------hhhccCC---------CCEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHH
Confidence 99999998875432 1122233 3788899999999999998 999999999999999
Q ss_pred HhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCC
Q 012513 362 VHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDG 441 (462)
Q Consensus 362 ~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g 441 (462)
++|||+|++|+..||+.||.++++ .|+|+.+...+ ++.++|.++|+++++|+ +|+++++++++.+.+ .+
T Consensus 353 ~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~ 421 (441)
T 2yjn_A 353 IHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE---LTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA----EP 421 (441)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTT---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC
T ss_pred HhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccccc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----CC
Confidence 999999999999999999999999 99999988765 89999999999999984 999999999999984 45
Q ss_pred ChHHHHHHHHHHHh
Q 012513 442 SSTKSLAQVAQRWK 455 (462)
Q Consensus 442 ~~~~~~~~~~~~l~ 455 (462)
+..+.++.+.+-+.
T Consensus 422 ~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 422 SPAEVVGICEELAA 435 (441)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 55555555544443
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.5e-36 Score=299.05 Aligned_cols=356 Identities=15% Similarity=0.102 Sum_probs=232.0
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCC-C-------
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSL-D------- 83 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~------- 83 (462)
|||++++.++.||++|+++||++|+++ ||+|+|++++.+.. .... .++.+..++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~~~----------~~~~--~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGP----------VVTG--VGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHH----------HHHH--TTCCEEESCSSCHHHHHHBCTT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHHHH----------HHHh--CCCEEEEeCCcchHHHHhhhcc
Confidence 799999999999999999999999988 99999999763221 1111 2567776654210 0
Q ss_pred CCCCCC----chHHHH-HHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCCCCccCCCC
Q 012513 84 DLPDNV----PIETRI-ILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMPEPVQLPGC 158 (462)
Q Consensus 84 ~~~~~~----~~~~~l-~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~~~~~~p~~ 158 (462)
..+... .....+ ...+..........+.+++++.+||+||+|.+.+++..+|+.+||+....... |..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~-------~~~ 140 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWD-------AVD 140 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCS-------SCC
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccC-------Ccc
Confidence 011001 111111 11111111111222233334458999999998888888999999943322211 000
Q ss_pred CcCCCCCCCCchhhhchHHHHHHHHHHHhhc---cccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeeccCcCCCCCC
Q 012513 159 VPVHGRDFIEPVQQRKNKAYRFLLSFRKQYH---LAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVGPLIQTGSTN 235 (462)
Q Consensus 159 ~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~---~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~~ 235 (462)
. +. ..++....++.+...+ .+. ..+.++.++...++... +. ..+++.+++. ..
T Consensus 141 ~----~~----~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~~-----~~----~~~~~~~~~~---~~--- 196 (384)
T 2p6p_A 141 A----DG----IHPGADAELRPELSEL-GLERLPAPDLFIDICPPSLRPAN-----AA----PARMMRHVAT---SR--- 196 (384)
T ss_dssp C----TT----THHHHHHHTHHHHHHT-TCSSCCCCSEEEECSCGGGSCTT-----SC----CCEECCCCCC---CC---
T ss_pred c----ch----hhHHHHHHHHHHHHHc-CCCCCCCCCeEEEECCHHHCCCC-----CC----CCCceEecCC---CC---
Confidence 0 00 1111111111111111 111 13445566555554321 00 1113344421 11
Q ss_pred CCCCCcchhhcccCCCCCCeEEEEEeCCCCCC-----CHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCC
Q 012513 236 ETNKRSPACLKWLDEQPSESVLFVCFGSGGTL-----SQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKD 310 (462)
Q Consensus 236 ~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~-----~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 310 (462)
+ .++.+|++..+++++|||++||.... +.+.+.+++++++..+.+++|+.+....
T Consensus 197 ---~--~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~--------------- 256 (384)
T 2p6p_A 197 ---Q--CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVA--------------- 256 (384)
T ss_dssp ---C--CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHH---------------
T ss_pred ---C--CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCH---------------
Confidence 1 44567887645567999999998654 4567889999999999999998764211
Q ss_pred CCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhccccee
Q 012513 311 PLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVS 390 (462)
Q Consensus 311 ~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G 390 (462)
+.+. .. .+|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++|...||+.|+.++++ .|+|
T Consensus 257 ------~~l~-~~-~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g 324 (384)
T 2p6p_A 257 ------EALR-AE-VPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAA 324 (384)
T ss_dssp ------HHHH-HH-CTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSE
T ss_pred ------HhhC-CC-CCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCe
Confidence 1111 11 347888 9999999999988 999999999999999999999999999999999999999 9999
Q ss_pred EEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 012513 391 FRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQR 453 (462)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 453 (462)
+.+...+ ++.++|.++|+++++|+ ++|++++++++.+++ .++..+.++.+.+-
T Consensus 325 ~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 377 (384)
T 2p6p_A 325 IALLPGE---DSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATVVTALEQL 377 (384)
T ss_dssp EECCTTC---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred EecCcCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHHHHHHHHH
Confidence 9987665 89999999999999984 899999999999995 44555555555443
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.2e-35 Score=293.45 Aligned_cols=370 Identities=18% Similarity=0.184 Sum_probs=235.9
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCC--
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDN-- 88 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-- 88 (462)
+|||++++.++.||++|++.|+++|+++ ||+|+++++..... .+. ..++.++.++..........
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~~----------~~~--~~g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFAD----------KVA--ATGPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHH----------HHH--TTSCEEEECCCCSCCTTSCGGG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHHH----------HHH--hCCCEEEEcCCcCccccccccc
Confidence 5799999999999999999999999988 99999999874322 111 13677877764311111000
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCCCCccCCCCCcCCCCCCC
Q 012513 89 -VPIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMPEPVQLPGCVPVHGRDFI 167 (462)
Q Consensus 89 -~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~~~~~~p~~~p~~~~~~~ 167 (462)
..........+..........+.+++++.+||+||+|.+.+++..+|+.+||+.............++... .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~-------~ 146 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEV-------A 146 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHT-------H
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccc-------c
Confidence 01111111111111222334455556667999999998877888899999994332221110000000000 0
Q ss_pred Cchhhhc------hHHHHHHHHHHHhh----------ccccEEEEcchhhhcchHHHHhhcccCCCCCCC-eEeeccCcC
Q 012513 168 EPVQQRK------NKAYRFLLSFRKQY----------HLAAGIMVNSFMELETGPFKALMEGESSFNPPP-VYPVGPLIQ 230 (462)
Q Consensus 168 ~~~~~r~------~~~~~~~~~~~~~~----------~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~-v~~vGpl~~ 230 (462)
..++++. ......+....... ...+.++.++...++... .. +. ++ ++++||+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~----~~-~~~v~~vG~~~~ 217 (430)
T 2iyf_A 147 EPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DR----VD-EDVYTFVGACQG 217 (430)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GG----SC-TTTEEECCCCC-
T ss_pred cchhhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----cc----CC-CccEEEeCCcCC
Confidence 0000000 00001111111110 123456666665555431 11 12 46 999998654
Q ss_pred CCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhC-CCceEEEEeCCcccccccccccccCCC
Q 012513 231 TGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMS-GQRFLWVAKSPHEEAANATYFSVQSMK 309 (462)
Q Consensus 231 ~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 309 (462)
... +..+|....+++++||+++||......+.+.+++++++.. +.+++|.++.....
T Consensus 218 ~~~---------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~------------- 275 (430)
T 2iyf_A 218 DRA---------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP------------- 275 (430)
T ss_dssp -------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG-------------
T ss_pred CCC---------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-------------
Confidence 221 1224665445567999999998755677888999999886 77888888753210
Q ss_pred CCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccce
Q 012513 310 DPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKV 389 (462)
Q Consensus 310 ~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~ 389 (462)
+.+..++ +|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..+||+.|+.++++ .|+
T Consensus 276 ~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~ 343 (430)
T 2iyf_A 276 AELGELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGV 343 (430)
T ss_dssp GGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTS
T ss_pred HHhccCC---------CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCC
Confidence 0111222 3788889999999999999 899999999999999999999999999999999999999 999
Q ss_pred eEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 012513 390 SFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQR 453 (462)
Q Consensus 390 G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 453 (462)
|+.+...+ ++.++|.++|+++++|+ ++++++.+.++.+.+ .++..+.++.+.+.
T Consensus 344 g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 344 ARKLATEE---ATADLLRETALALVDDP---EVARRLRRIQAEMAQ----EGGTRRAADLIEAE 397 (430)
T ss_dssp EEECCCC----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----HCHHHHHHHHHHTT
T ss_pred EEEcCCCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Confidence 99987665 89999999999999984 899999999988875 24455555544443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.1e-35 Score=295.85 Aligned_cols=348 Identities=16% Similarity=0.134 Sum_probs=207.8
Q ss_pred CCCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCC----
Q 012513 6 SKQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVS---- 81 (462)
Q Consensus 6 ~~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---- 81 (462)
++...+|||+|++.++.||++|++.|+++|+++ ||+|++++++.+.+ .. .. .++.+..++...
T Consensus 10 ~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~~~------~~----~~--~G~~~~~~~~~~~~~~ 76 (398)
T 4fzr_A 10 VPRGSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENMGP------TV----TG--AGLPFAPTCPSLDMPE 76 (398)
T ss_dssp -----CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGGHH------HH----HH--TTCCEEEEESSCCHHH
T ss_pred CCCCCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHHHH------HH----Hh--CCCeeEecCCccchHh
Confidence 344568999999999999999999999999988 99999999864332 11 11 145555554210
Q ss_pred ---------CCCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCCC
Q 012513 82 ---------LDDLPDNV-PIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMPE 151 (462)
Q Consensus 82 ---------~~~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~~ 151 (462)
....+... .....+...+......+...+.+++++.+||+||+|...+++..+|+.+||+........
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~-- 154 (398)
T 4fzr_A 77 VLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL-- 154 (398)
T ss_dssp HHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS--
T ss_pred hhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCC--
Confidence 00000000 111122222222222333334444455699999999988888899999999332221110
Q ss_pred CccCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHhhc-----cccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeec
Q 012513 152 PVQLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQYH-----LAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVG 226 (462)
Q Consensus 152 ~~~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vG 226 (462)
.......... ...+......+. .....+......+.... . .... .+.+++
T Consensus 155 -------------~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~-~~~~~~ 209 (398)
T 4fzr_A 155 -------------ASPELIKSAG---VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----K---PGTT-KMRYVP 209 (398)
T ss_dssp -------------CCCHHHHHHH---HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------------CCCE-ECCCCC
T ss_pred -------------CCchhhhHHH---HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----C---CCCC-CeeeeC
Confidence 0000001111 111111112111 11112211111111110 0 0000 112222
Q ss_pred cCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCC--------CHHHHHHHHHHHHhCCCceEEEEeCCccccc
Q 012513 227 PLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTL--------SQEQLNELALGLEMSGQRFLWVAKSPHEEAA 298 (462)
Q Consensus 227 pl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~--------~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~ 298 (462)
+.. .. .++..|+...+++++|||++||.... ..+.+..++++++..+.+++|+.++...
T Consensus 210 ~~~--------~~--~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~--- 276 (398)
T 4fzr_A 210 YNG--------RN--DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA--- 276 (398)
T ss_dssp CCC--------SS--CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC------
T ss_pred CCC--------CC--CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch---
Confidence 100 11 44556776555667999999997432 3456888999999999999998776422
Q ss_pred ccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhh
Q 012513 299 NATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKM 378 (462)
Q Consensus 299 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~ 378 (462)
+.+..++ +|+.+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|+..||+.
T Consensus 277 -----------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~ 334 (398)
T 4fzr_A 277 -----------QTLQPLP---------EGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWD 334 (398)
T ss_dssp ----------------CC---------TTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHH
T ss_pred -----------hhhccCC---------CcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHH
Confidence 1122233 3788899999999999999 89999999999999999999999999999999
Q ss_pred hhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHh
Q 012513 379 NAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAAN 435 (462)
Q Consensus 379 ~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 435 (462)
|+.++++ .|+|+.+...+ ++.++|.++|+++++|+ ++|+++++.++.+.+
T Consensus 335 ~a~~~~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 335 SARLLHA-AGAGVEVPWEQ---AGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHHH-TTSEEECC----------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 9999999 99999998776 89999999999999995 999999999998874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.2e-34 Score=284.52 Aligned_cols=350 Identities=14% Similarity=0.132 Sum_probs=221.4
Q ss_pred CCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCC-C---
Q 012513 8 QIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSL-D--- 83 (462)
Q Consensus 8 ~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~--- 83 (462)
+.++|||+|++.++.||++|++.||++|.++ ||+|+++++ .+.+ .. . ..++.+..++.... .
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~------~~----~--~~G~~~~~~~~~~~~~~~~ 82 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHAD------RA----A--AAGLEVVDVAPDYSAVKVF 82 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHH------HH----H--TTTCEEEESSTTCCHHHHH
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHH------HH----H--hCCCeeEecCCccCHHHHh
Confidence 3457999999999999999999999999988 999999998 4322 11 1 13678887764210 0
Q ss_pred ----------------CCCCCCchHHHH-HHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCcccccc
Q 012513 84 ----------------DLPDNVPIETRI-ILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEY 146 (462)
Q Consensus 84 ----------------~~~~~~~~~~~l-~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~ 146 (462)
...........+ ..........+.+.+ ++.+||+||+|...+++..+|+.+||+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~ 158 (398)
T 3oti_A 83 EQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALV----DDYRPDLVVYEQGATVGLLAADRAGVPAVQRN 158 (398)
T ss_dssp HHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHH----HHHCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred hhcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHH----HHcCCCEEEECchhhHHHHHHHHcCCCEEEEe
Confidence 000111111111 111122233333444 44489999999888888899999999433222
Q ss_pred CCCCCCccCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHh-hccccEEEEcchhhhcchHHHHhhcccCCCCCCCeEee
Q 012513 147 RDMPEPVQLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQ-YHLAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPV 225 (462)
Q Consensus 147 ~~~~~~~~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~v 225 (462)
.... ............+......+.. .......+......+... .. .... .+.++
T Consensus 159 ~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~-~~~~~ 214 (398)
T 3oti_A 159 QSAW---------------RTRGMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLE-----AE---PEGW-FMRWV 214 (398)
T ss_dssp CTTC---------------CCTTHHHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT-----SC---CCSB-CCCCC
T ss_pred ccCC---------------CccchhhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----CC---CCCC-Ccccc
Confidence 1100 0000000000111111111100 011111111111111110 00 0011 11221
Q ss_pred ccCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCCC--CHHHHHHHHHHHHhCCCceEEEEeCCcccccccccc
Q 012513 226 GPLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGTL--SQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYF 303 (462)
Q Consensus 226 Gpl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~~--~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~ 303 (462)
|. .. . ..+..|+...+++++|||++||.... ..+.+.+++++++..+.+++|+.++...
T Consensus 215 -~~--~~------~--~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~-------- 275 (398)
T 3oti_A 215 -PY--GG------G--AVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI-------- 275 (398)
T ss_dssp -CC--CC------C--EECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC--------
T ss_pred -CC--CC------C--cCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh--------
Confidence 10 00 1 44556877656678999999997432 5667888999999999999998876432
Q ss_pred cccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhh--H
Q 012513 304 SVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNA--V 381 (462)
Q Consensus 304 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a--~ 381 (462)
+.+..+++ |+.+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|+..||+.|+ .
T Consensus 276 ------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~ 338 (398)
T 3oti_A 276 ------SPLGTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTARE 338 (398)
T ss_dssp ------GGGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHH
T ss_pred ------hhhccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHH
Confidence 11223333 788899999999999999 9999999999999999999999999999999999 9
Q ss_pred HhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHH
Q 012513 382 LLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQV 450 (462)
Q Consensus 382 rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 450 (462)
++++ .|+|+.+...+ .+.+.|. ++++| +++|++++++++.+.+ ..+..+.++.+
T Consensus 339 ~~~~-~g~g~~~~~~~---~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~l 392 (398)
T 3oti_A 339 AVSR-RGIGLVSTSDK---VDADLLR----RLIGD---ESLRTAAREVREEMVA----LPTPAETVRRI 392 (398)
T ss_dssp HHHH-HTSEEECCGGG---CCHHHHH----HHHHC---HHHHHHHHHHHHHHHT----SCCHHHHHHHH
T ss_pred HHHH-CCCEEeeCCCC---CCHHHHH----HHHcC---HHHHHHHHHHHHHHHh----CCCHHHHHHHH
Confidence 9999 99999998765 7888777 77888 4999999999999984 45555444444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.6e-32 Score=272.29 Aligned_cols=354 Identities=16% Similarity=0.110 Sum_probs=222.2
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeC-CCCC------CC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFL-PPVS------LD 83 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~------~~ 83 (462)
+|||+|++.++.||++|++.|+++|+++ ||+|++++++.+.+ .... .++.+..+ +... ..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~~~----------~~~~--~g~~~~~~~~~~~~~~~~~~~ 67 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPELQA----------TAHG--AGLTTAGIRGNDRTGDTGGTT 67 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHHHH----------HHHH--BTCEEEEC-------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhhHH----------HHHh--CCCceeeecCCccchhhhhhh
Confidence 4899999999999999999999999988 99999999753222 1111 24666655 2210 00
Q ss_pred CCCCCC-----chHHHHHHHHHHHHHHH-------HHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCCCC
Q 012513 84 DLPDNV-----PIETRIILTLVRSLSSL-------RDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDMPE 151 (462)
Q Consensus 84 ~~~~~~-----~~~~~l~~~~~~~~~~~-------~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~~~ 151 (462)
..+... .....+...+......+ ...+.+++++.+||+||+|...+++..+|+.+||+.........
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~- 146 (391)
T 3tsa_A 68 QLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD- 146 (391)
T ss_dssp -CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC-
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc-
Confidence 000000 00011111111111122 33344444556999999998777788899999994332221100
Q ss_pred CccCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHhhc-----cccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeec
Q 012513 152 PVQLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQYH-----LAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVG 226 (462)
Q Consensus 152 ~~~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vG 226 (462)
. ......... ..++......+. .....+.....++.... +. ....+.|+
T Consensus 147 ------~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~- 200 (391)
T 3tsa_A 147 ------P-------TAGPFSDRA---HELLDPVCRHHGLTGLPTPELILDPCPPSLQASD-----AP----QGAPVQYV- 200 (391)
T ss_dssp ------C-------TTTHHHHHH---HHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT-----SC----CCEECCCC-
T ss_pred ------c-------ccccccchH---HHHHHHHHHHcCCCCCCCCceEEEecChhhcCCC-----CC----ccCCeeee-
Confidence 0 000111111 112222222221 11222222222222110 00 00012233
Q ss_pred cCcCCCCCCCCCCCcchhhcccCCCCCCeEEEEEeCCCCC---CCHHHHHHHHHHHHhC-CCceEEEEeCCccccccccc
Q 012513 227 PLIQTGSTNETNKRSPACLKWLDEQPSESVLFVCFGSGGT---LSQEQLNELALGLEMS-GQRFLWVAKSPHEEAANATY 302 (462)
Q Consensus 227 pl~~~~~~~~~~~~~~~~~~wl~~~~~~~~v~vs~Gs~~~---~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~ 302 (462)
|. . .. ..+..|+...+++++|++++||... ...+.+..++++ +.. +.+++|..++...
T Consensus 201 p~-----~---~~--~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~------- 262 (391)
T 3tsa_A 201 PY-----N---GS--GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR------- 262 (391)
T ss_dssp CC-----C---CC--EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-------
T ss_pred cC-----C---CC--cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch-------
Confidence 11 0 11 4455687765667899999999732 236778888888 877 6788887765322
Q ss_pred ccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHH
Q 012513 303 FSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVL 382 (462)
Q Consensus 303 ~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~r 382 (462)
+.+..++ +|+.+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|+..||+.|+.+
T Consensus 263 -------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 263 -------ALLTDLP---------DNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARN 324 (391)
T ss_dssp -------GGCTTCC---------TTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred -------hhcccCC---------CCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHH
Confidence 1112233 3788899999999999998 999999999999999999999999999999999999
Q ss_pred hhcccceeEEeee--cCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 012513 383 LTDDLKVSFRVKV--NENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVA 451 (462)
Q Consensus 383 v~~~~g~G~~~~~--~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 451 (462)
+++ .|+|+.+.. .+ .+.+.|.+++.++++|+ ++|++++++++.+.+ .++..+.++.+.
T Consensus 325 ~~~-~g~g~~~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 384 (391)
T 3tsa_A 325 LAA-AGAGICLPDEQAQ---SDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPHPAALVRTLE 384 (391)
T ss_dssp HHH-TTSEEECCSHHHH---TCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred HHH-cCCEEecCccccc---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 999 999999986 55 79999999999999996 999999999999884 555555444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=2.3e-30 Score=258.43 Aligned_cols=368 Identities=16% Similarity=0.131 Sum_probs=231.1
Q ss_pred CCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCC------
Q 012513 7 KQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPV------ 80 (462)
Q Consensus 7 ~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~------ 80 (462)
+...+|||++++.++.||++|++.|+++|+++ ||+|++++++.+.. .... .++.+..++..
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~~~----------~~~~--~g~~~~~~~~~~~~~~~ 82 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGFAG----------TLRK--LGFEPVATGMPVFDGFL 82 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHH----------HHHH--TTCEEEECCCCHHHHHH
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHHHH----------HHHh--cCCceeecCcccccchh
Confidence 34568999999999999999999999999988 99999999863321 1111 26777777630
Q ss_pred -------CCCCCCCCCchHH---HHHHHHHHH-HHHHHHHHHHHhccCCccEEEeCCCcchHHHHHHHcCCccccccCCC
Q 012513 81 -------SLDDLPDNVPIET---RIILTLVRS-LSSLRDALKVLTESTRLVALVVDCFGSAAFDVANELDVKFNCEYRDM 149 (462)
Q Consensus 81 -------~~~~~~~~~~~~~---~l~~~~~~~-~~~~~~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgI~~~~~~~~~ 149 (462)
.....+. ..... .+...+... ...+...+.+++++.+||+||+|...+++..+|+.+||+........
T Consensus 83 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 83 AALRIRFDTDSPEG-LTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHHHHHHSCSCCTT-CCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred hhhhhhhcccCCcc-CChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 0000000 00011 111111111 11122233333444599999999877777788999999332221110
Q ss_pred CCCccCCCCCcCCCCCCCCchhhhchHHHHHHHHHHHh-------hccccEEEEcchhhhcchHHHHhhcccCCCCCCCe
Q 012513 150 PEPVQLPGCVPVHGRDFIEPVQQRKNKAYRFLLSFRKQ-------YHLAAGIMVNSFMELETGPFKALMEGESSFNPPPV 222 (462)
Q Consensus 150 ~~~~~~p~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~-------~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v 222 (462)
.. ......+....+..+...... ....+.++..+-..++.... .+ . ..-
T Consensus 162 ---------~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~-~~-------~-~~~ 217 (412)
T 3otg_A 162 ---------DT------PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEF-RA-------R-PRR 217 (412)
T ss_dssp ---------CC------CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHH-HT-------C-TTE
T ss_pred ---------cC------chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcc-cC-------C-CCc
Confidence 00 000111111112222111100 01222333333222222110 00 0 011
Q ss_pred EeeccCcCCCCCCCCCCCcchhhcc-cCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccc
Q 012513 223 YPVGPLIQTGSTNETNKRSPACLKW-LDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANAT 301 (462)
Q Consensus 223 ~~vGpl~~~~~~~~~~~~~~~~~~w-l~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~ 301 (462)
. |+....... . .+...| ....+++++|++++||......+.+.+++++++..+.+++|..+....
T Consensus 218 ~---~~~~~~~~~---~--~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~------ 283 (412)
T 3otg_A 218 H---ELRPVPFAE---Q--GDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD------ 283 (412)
T ss_dssp E---ECCCCCCCC---C--CCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC------
T ss_pred c---eeeccCCCC---C--CCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC------
Confidence 1 111111110 1 334456 222345679999999987666788999999999888899998876431
Q ss_pred cccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhH
Q 012513 302 YFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAV 381 (462)
Q Consensus 302 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~ 381 (462)
.+.+..++ +++.+.+|+|+.++|++++ +||+|||+||++||+++|+|+|++|...||..|+.
T Consensus 284 -------~~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~ 345 (412)
T 3otg_A 284 -------VSGLGEVP---------ANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQ 345 (412)
T ss_dssp -------CTTCCCCC---------TTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred -------hhhhccCC---------CcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchhHHHHHH
Confidence 01222233 3788889999999999999 89999999999999999999999999999999999
Q ss_pred HhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHh
Q 012513 382 LLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWK 455 (462)
Q Consensus 382 rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 455 (462)
++++ .|+|..+...+ .++++|.++|.++++|+ ++++++.+.++.+.+ .++..+.++.+.+-+.
T Consensus 346 ~v~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 346 AVAQ-AGAGDHLLPDN---ISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHH-HTSEEECCGGG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCCHHHHHTTHHHHHC
T ss_pred HHHH-cCCEEecCccc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCCHHHHHHHHHHHhc
Confidence 9999 99999998765 89999999999999994 899999999988875 4556665555555443
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=202.07 Aligned_cols=160 Identities=25% Similarity=0.407 Sum_probs=135.7
Q ss_pred chhhcccCCCCCCeEEEEEeCCCC-CCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHH
Q 012513 242 PACLKWLDEQPSESVLFVCFGSGG-TLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL 320 (462)
Q Consensus 242 ~~~~~wl~~~~~~~~v~vs~Gs~~-~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 320 (462)
+++.+|++..+++++|||+|||.. ....+.+..++++++..+.+++|+.+.... ..+++
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----------------~~~~~--- 68 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----------------DTLGL--- 68 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------------TTCCT---
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------------ccCCC---
Confidence 789999987666789999999984 456778899999999888999998875422 12333
Q ss_pred HhhCCCceEeccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcc
Q 012513 321 DRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 400 (462)
Q Consensus 321 ~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~ 400 (462)
|+.+.+|+||.++|.|+.+.+||||||+||++||+++|+|+|++|...||+.||.++++ .|+|+.+...+
T Consensus 69 ------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~--- 138 (170)
T 2o6l_A 69 ------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNT--- 138 (170)
T ss_dssp ------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTT---
T ss_pred ------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecccc---
Confidence 78888999999999555555999999999999999999999999999999999999999 99999988665
Q ss_pred cCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012513 401 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAA 434 (462)
Q Consensus 401 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 434 (462)
++.++|.++|.++++|+ +||++++++++.++
T Consensus 139 ~~~~~l~~~i~~ll~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 MSSTDLLNALKRVINDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp CCHHHHHHHHHHHHHCH---HHHHHHHHHC----
T ss_pred CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHhh
Confidence 89999999999999984 89999999998776
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.92 E-value=5e-23 Score=201.78 Aligned_cols=311 Identities=14% Similarity=0.077 Sum_probs=180.5
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCCCc
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDNVP 90 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 90 (462)
+.||++...++-||++|.++||++|.++ ||+|+|++.+.-.+ ...+.. .++.+..++....... ....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~e--------~~~v~~--~g~~~~~i~~~~~~~~-~~~~ 69 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGIE--------NDLVPK--AGLPLHLIQVSGLRGK-GLKS 69 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSSTH--------HHHTGG--GTCCEEECC------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchHh--------hchhhh--cCCcEEEEECCCcCCC-CHHH
Confidence 4589999888889999999999999998 99999998763221 222222 2466666653221110 0011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcchH--HHHHHHcCCccccccCCCCCCccCCCCCcCCCCCCCC
Q 012513 91 IETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGSAA--FDVANELDVKFNCEYRDMPEPVQLPGCVPVHGRDFIE 168 (462)
Q Consensus 91 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~~~--~~vA~~lgI~~~~~~~~~~~~~~~p~~~p~~~~~~~~ 168 (462)
........+ .........+++ .+||+||++...... ..+|..+||+....- ...+||.
T Consensus 70 ~~~~~~~~~-~~~~~~~~~l~~----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe-----~n~~~G~---------- 129 (365)
T 3s2u_A 70 LVKAPLELL-KSLFQALRVIRQ----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE-----QNAVAGT---------- 129 (365)
T ss_dssp ---CHHHHH-HHHHHHHHHHHH----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE-----CSSSCCH----------
T ss_pred HHHHHHHHH-HHHHHHHHHHHh----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe-----cchhhhh----------
Confidence 111111111 111222333444 499999988655543 356788898322110 0001110
Q ss_pred chhhhchHHHHHHHHHHHhhccccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeeccCcCCCCCCCCCCCcchhhccc
Q 012513 169 PVQQRKNKAYRFLLSFRKQYHLAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVGPLIQTGSTNETNKRSPACLKWL 248 (462)
Q Consensus 169 ~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~wl 248 (462)
. +++. . +....+. .++.+... ...+..++|+......... ......+
T Consensus 130 -----~----nr~l---~--~~a~~v~-~~~~~~~~-------------~~~k~~~~g~pvr~~~~~~-----~~~~~~~ 176 (365)
T 3s2u_A 130 -----A----NRSL---A--PIARRVC-EAFPDTFP-------------ASDKRLTTGNPVRGELFLD-----AHARAPL 176 (365)
T ss_dssp -----H----HHHH---G--GGCSEEE-ESSTTSSC-------------C---CEECCCCCCGGGCCC-----TTSSCCC
T ss_pred -----H----HHhh---c--cccceee-eccccccc-------------CcCcEEEECCCCchhhccc-----hhhhccc
Confidence 1 1111 1 1122232 22221100 1135677774332221110 1111122
Q ss_pred CCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCC----CceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhh-
Q 012513 249 DEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSG----QRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRT- 323 (462)
Q Consensus 249 ~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~- 323 (462)
+ +.+++|+|..||.... ...+.+.++++... ..++|..+.... +...+++
T Consensus 177 ~--~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~---------------------~~~~~~~~ 231 (365)
T 3s2u_A 177 T--GRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHA---------------------EITAERYR 231 (365)
T ss_dssp T--TSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTH---------------------HHHHHHHH
T ss_pred C--CCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccc---------------------ccccceec
Confidence 2 2345888888885432 33444666766553 345665554321 1222222
Q ss_pred -CCCceEeccCcch-hhhhccccccccccccCchhHHHHHHhCCceeecccc----cchhhhhHHhhcccceeEEeeecC
Q 012513 324 -KGVGLVVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY----SEQKMNAVLLTDDLKVSFRVKVNE 397 (462)
Q Consensus 324 -~~~~~~~~~~~pq-~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~----~DQ~~~a~rv~~~~g~G~~~~~~~ 397 (462)
.+.++.+.+|+++ .++|..++ ++|||+|.+|+.|++++|+|+|++|+- .+|..||..+++ .|+|+.+..++
T Consensus 232 ~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l~~~~ 308 (365)
T 3s2u_A 232 TVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGRLLPQKS 308 (365)
T ss_dssp HTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEEECCTTT
T ss_pred ccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEEEeecCC
Confidence 2335667799987 68999999 899999999999999999999999974 479999999999 99999998776
Q ss_pred CcccCHHHHHHHHHHHhcCc
Q 012513 398 NGLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 398 ~~~~~~~~l~~ai~~vl~~~ 417 (462)
++++.|.++|.++++|+
T Consensus 309 ---~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 309 ---TGAAELAAQLSEVLMHP 325 (365)
T ss_dssp ---CCHHHHHHHHHHHHHCT
T ss_pred ---CCHHHHHHHHHHHHCCH
Confidence 99999999999999996
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.78 E-value=8e-17 Score=157.42 Aligned_cols=338 Identities=13% Similarity=0.068 Sum_probs=194.1
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCCCch
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDNVPI 91 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 91 (462)
|||++++.+..||..+...|+++|.++ ||+|+++++..... ...+.. .++.+..++.... ... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~--------~~~~~~--~g~~~~~~~~~~~---~~~-~~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME--------ADLVPK--HGIEIDFIRISGL---RGK-GI 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH--------HHHGGG--GTCEEEECCCCCC---TTC-CH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch--------hhhccc--cCCceEEecCCcc---CcC-cc
Confidence 899999988789999999999999887 99999999763211 111111 2566665543211 111 11
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhccCCccEEEeCCCcc--hHHHHHHHcCCccccccCCCCCCccCCCCCcCCCCCCC
Q 012513 92 ETRIILT--LVRSLSSLRDALKVLTESTRLVALVVDCFGS--AAFDVANELDVKFNCEYRDMPEPVQLPGCVPVHGRDFI 167 (462)
Q Consensus 92 ~~~l~~~--~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~--~~~~vA~~lgI~~~~~~~~~~~~~~~p~~~p~~~~~~~ 167 (462)
...+... .......+...+ ++.+||+|+++.... .+..++..+|++....... . .+
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~l----~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~---------~-------~~ 131 (364)
T 1f0k_A 72 KALIAAPLRIFNAWRQARAIM----KAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQN---------G-------IA 131 (364)
T ss_dssp HHHHTCHHHHHHHHHHHHHHH----HHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECS---------S-------SC
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecC---------C-------CC
Confidence 1111101 111122233333 344899999986432 3345677778732211110 0 00
Q ss_pred CchhhhchHHHHHHHHHHHhhccccEEEEcchhhhcchHHHHhhcccCCCCCCCeEeeccCcCCCCCCCCCCCcchhhcc
Q 012513 168 EPVQQRKNKAYRFLLSFRKQYHLAAGIMVNSFMELETGPFKALMEGESSFNPPPVYPVGPLIQTGSTNETNKRSPACLKW 247 (462)
Q Consensus 168 ~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~l~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~w 247 (462)
.. ...+ .....+.++..+-. . .|++..+|.-.....-. . ......
T Consensus 132 ~~--------~~~~-----~~~~~d~v~~~~~~-~----------------~~~~~~i~n~v~~~~~~-~----~~~~~~ 176 (364)
T 1f0k_A 132 GL--------TNKW-----LAKIATKVMQAFPG-A----------------FPNAEVVGNPVRTDVLA-L----PLPQQR 176 (364)
T ss_dssp CH--------HHHH-----HTTTCSEEEESSTT-S----------------SSSCEECCCCCCHHHHT-S----CCHHHH
T ss_pred cH--------HHHH-----HHHhCCEEEecChh-h----------------cCCceEeCCccchhhcc-c----chhhhh
Confidence 00 0000 01223444432211 1 12455555322111000 0 001111
Q ss_pred cCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhC--CCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHh---
Q 012513 248 LDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMS--GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDR--- 322 (462)
Q Consensus 248 l~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--- 322 (462)
+...+++++|++..|+.. .......++++++.. +.++++.++.+.. +.+.+.
T Consensus 177 ~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~~---------------------~~l~~~~~~ 233 (364)
T 1f0k_A 177 LAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGSQ---------------------QSVEQAYAE 233 (364)
T ss_dssp HTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTCH---------------------HHHHHHHHH
T ss_pred cccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCchH---------------------HHHHHHHhh
Confidence 111123456777777853 244455566776655 3455565654321 222222
Q ss_pred hCCCceEeccCcc-hhhhhccccccccccccCchhHHHHHHhCCceeecccc---cchhhhhHHhhcccceeEEeeecCC
Q 012513 323 TKGVGLVVPSWSP-QVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLY---SEQKMNAVLLTDDLKVSFRVKVNEN 398 (462)
Q Consensus 323 ~~~~~~~~~~~~p-q~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~---~DQ~~~a~rv~~~~g~G~~~~~~~~ 398 (462)
..-.++.+.+|++ -..++..++ +||+++|.++++||+++|+|+|+.|.. .||..|+..+.+ .|.|..++..+
T Consensus 234 ~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~-~g~g~~~~~~d- 309 (364)
T 1f0k_A 234 AGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK-AGAAKIIEQPQ- 309 (364)
T ss_dssp TTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH-TTSEEECCGGG-
T ss_pred cCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHh-CCcEEEecccc-
Confidence 2223688889984 488999999 899999999999999999999999988 799999999998 89999887665
Q ss_pred cccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 399 GLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
.+.++++++|.++ |+ ..+++..+-+.... +..+..+..+.+.+.+++.
T Consensus 310 --~~~~~la~~i~~l--~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 310 --LSVDAVANTLAGW--SR---ETLLTMAERARAAS----IPDATERVANEVSRVARAL 357 (364)
T ss_dssp --CCHHHHHHHHHTC--CH---HHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC
T ss_pred --CCHHHHHHHHHhc--CH---HHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHH
Confidence 7799999999999 53 55554443333222 3556666666666665543
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.53 E-value=2.1e-14 Score=128.60 Aligned_cols=132 Identities=17% Similarity=0.150 Sum_probs=94.5
Q ss_pred CCCeEEEEEeCCCCCCCHHHHHHH-----HHHHHhCC-CceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhh--
Q 012513 252 PSESVLFVCFGSGGTLSQEQLNEL-----ALGLEMSG-QRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRT-- 323 (462)
Q Consensus 252 ~~~~~v~vs~Gs~~~~~~~~~~~i-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-- 323 (462)
+++++|||+.||... -.+.+..+ +++|...+ .++++.++.... + ..+....+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~--------------~----~~~~~~~~~~~ 86 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS--------------S----EFEHLVQERGG 86 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC--------------C----CCCSHHHHHTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch--------------h----hHHHHHHhhhc
Confidence 345699999999632 24444444 38888777 688888886431 0 001000010
Q ss_pred -------------------------CCCceEeccCcch-hhhhc-cccccccccccCchhHHHHHHhCCceeecccc---
Q 012513 324 -------------------------KGVGLVVPSWSPQ-VQVLR-HGSTGGFLSHCGWNSILESIVHGVPIIAWPLY--- 373 (462)
Q Consensus 324 -------------------------~~~~~~~~~~~pq-~~lL~-~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~--- 373 (462)
..-++.+.+|+++ .++|+ .++ ++|||||+||++|++++|+|+|++|..
T Consensus 87 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~ 164 (224)
T 2jzc_A 87 QRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLM 164 (224)
T ss_dssp EECSCCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCC
T ss_pred cccccccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccc
Confidence 0114556688777 58999 999 999999999999999999999999974
Q ss_pred -cchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHH
Q 012513 374 -SEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGL 413 (462)
Q Consensus 374 -~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~v 413 (462)
.+|..||+++++ .|+++.+ +.++|.++|+++
T Consensus 165 ~~HQ~~nA~~l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 165 DNHQQQIADKFVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp CCHHHHHHHHHHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred cchHHHHHHHHHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 369999999999 9998754 445677777776
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.32 E-value=1.1e-10 Score=108.87 Aligned_cols=117 Identities=11% Similarity=0.071 Sum_probs=88.9
Q ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhh-CCCceEecc
Q 012513 254 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRT-KGVGLVVPS 332 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~ 332 (462)
.+.|+|++|... ......+++++|.... ++.++.+.... ..+.+.+.. +..++.+..
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~-------------------~~~~l~~~~~~~~~v~v~~ 214 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP-------------------NLKKLQKFAKLHNNIRLFI 214 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT-------------------THHHHHHHHHTCSSEEEEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch-------------------HHHHHHHHHhhCCCEEEEe
Confidence 458999999853 2335667888886644 45555654321 112333222 234788889
Q ss_pred Ccch-hhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeec
Q 012513 333 WSPQ-VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVN 396 (462)
Q Consensus 333 ~~pq-~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~ 396 (462)
|+++ ..+|..++ ++|++|| +|+.|+++.|+|+|++|...+|..||..+++ .|++..+..-
T Consensus 215 ~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~~ 275 (282)
T 3hbm_A 215 DHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKYL 275 (282)
T ss_dssp SCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGGG
T ss_pred CHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcchh
Confidence 9987 67999999 8999999 8999999999999999999999999999999 9999988653
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.20 E-value=4.2e-09 Score=103.27 Aligned_cols=115 Identities=13% Similarity=-0.000 Sum_probs=76.7
Q ss_pred CceEeccCcchhh---hhcccccccccc-----------ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeE
Q 012513 326 VGLVVPSWSPQVQ---VLRHGSTGGFLS-----------HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSF 391 (462)
Q Consensus 326 ~~~~~~~~~pq~~---lL~~~~~~~~I~-----------HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~ 391 (462)
+++.+.+|+|+++ ++..++ ++|. -|..++++||+++|+|+|+.+.. .....+.. |.|.
T Consensus 253 ~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~ 324 (394)
T 3okp_A 253 QNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGL 324 (394)
T ss_dssp GGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEE
T ss_pred CeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCce
Confidence 4788889998644 677888 5665 56677999999999999997653 33344445 4676
Q ss_pred EeeecCCcccCHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcCCcc
Q 012513 392 RVKVNENGLVGREDIANYAKGLIQGEE-GKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNPEIE 460 (462)
Q Consensus 392 ~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~ 460 (462)
.+.. -+.++++++|.++++|++ ...+.+++++ .++ +.-+.....+++.+-++++..+
T Consensus 325 ~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~---~~~----~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 325 VVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRA---HVE----AEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp ECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHH---HHH----HHTBHHHHHHHHHHHHHSCCC-
T ss_pred EeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH---HHH----HhCCHHHHHHHHHHHHHHhccC
Confidence 6653 378999999999999852 2223333333 333 2335666677777777766544
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.15 E-value=2.3e-08 Score=99.62 Aligned_cols=96 Identities=14% Similarity=0.053 Sum_probs=67.5
Q ss_pred CCceEeccCcch---hhhhccccccccccc----cCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecC
Q 012513 325 GVGLVVPSWSPQ---VQVLRHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE 397 (462)
Q Consensus 325 ~~~~~~~~~~pq---~~lL~~~~~~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~ 397 (462)
.+++.+.+++|+ ..++..++ ++|.- |..++++||+++|+|+|+.+. ......+.+ -+.|+.+..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEECCC--
Confidence 357888899987 46777888 45532 445689999999999999764 344455666 567777653
Q ss_pred CcccCHHHHHHHHHHHhcCch-HHHHHHHHHHHHHH
Q 012513 398 NGLVGREDIANYAKGLIQGEE-GKLLRKKMRALKDA 432 (462)
Q Consensus 398 ~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~ 432 (462)
-+.++++++|.++++|++ ...+.+++++..+.
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 378999999999999863 33445555555443
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.11 E-value=5.4e-08 Score=96.69 Aligned_cols=112 Identities=13% Similarity=0.013 Sum_probs=75.6
Q ss_pred CceEeccCcchh---hhhccccccccc----cccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCC
Q 012513 326 VGLVVPSWSPQV---QVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 398 (462)
Q Consensus 326 ~~~~~~~~~pq~---~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~ 398 (462)
++++..+|+|++ .++..++ ++| .-|-.++++||+++|+|+|+... ......+.. |.|..+..
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~--- 379 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA--- 379 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT---
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC---
Confidence 566678999985 4577888 455 23445799999999999998754 344444545 57777653
Q ss_pred cccCHHHHHHHHHHHhc-Cch-HHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcCC
Q 012513 399 GLVGREDIANYAKGLIQ-GEE-GKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNPE 458 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~-~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 458 (462)
-+.++++++|.++++ +++ ...+.+++++.. + .-+.....+++.+-+++..
T Consensus 380 --~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~-----~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 380 --GDPGELANAILKALELSRSDLSKFRENCKKRA---M-----SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp --TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH---H-----TSCHHHHHHHHHHHHHTCS
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH---h-----hCcHHHHHHHHHHHHHHHH
Confidence 378999999999998 652 344555555444 1 2456666666666666553
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.05 E-value=6.9e-09 Score=101.34 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=72.8
Q ss_pred CceEeccCcch---hhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 326 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 326 ~~~~~~~~~pq---~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
+++.+.+++++ ..+|..++ +||+.+| |.+.||+++|+|+|+.+..++++.. .+ .|.|+.+. .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CC
Confidence 47877766555 58899999 7898874 4466999999999999876776653 34 47787663 37
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 012513 403 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRW 454 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 454 (462)
.++|++++.++++|+ ..+++..+ .. +....++++.+.++.+.+.+
T Consensus 321 ~~~la~~i~~ll~d~---~~~~~~~~---~~-~~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 321 PEGVYRVVKGLLENP---EELSRMRK---AK-NPYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHHHHHTCH---HHHHHHHH---SC-CSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCh---Hhhhhhcc---cC-CCCCCChHHHHHHHHHHHHh
Confidence 899999999999985 44443332 11 22233455555555444433
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.01 E-value=7e-09 Score=101.50 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=59.8
Q ss_pred CceEeccCcch---hhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 326 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 326 ~~~~~~~~~pq---~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
+++.+.+++++ ..+|..++ +||+.+| +.++||+++|+|+|+.+..++..+ +.+ .|.|+.+. .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~------~d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG------TD 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC------SS
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC------CC
Confidence 47877666664 67788899 7888875 458899999999999987544433 334 47887774 27
Q ss_pred HHHHHHHHHHHhcCc
Q 012513 403 REDIANYAKGLIQGE 417 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~ 417 (462)
.++|+++|.++++|+
T Consensus 329 ~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 329 KQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 899999999999885
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.99 E-value=1.2e-07 Score=93.23 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=61.1
Q ss_pred CCceEeccCcch---hhhhcccccccccc--ccCc-hhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCC
Q 012513 325 GVGLVVPSWSPQ---VQVLRHGSTGGFLS--HCGW-NSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 398 (462)
Q Consensus 325 ~~~~~~~~~~pq---~~lL~~~~~~~~I~--HGG~-~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~ 398 (462)
.+++.+.+++|+ ..++..+++-++-+ +.|+ ++++||+++|+|+|+.+. ......+.+ -+.|..+..
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~--- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPV--- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCT---
T ss_pred cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCC---
Confidence 457888999997 47888899422222 3444 489999999999999765 345555665 566776643
Q ss_pred cccCHHHHHHHHHHHhcCc
Q 012513 399 GLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~~~ 417 (462)
-+.+++.++|.++++|+
T Consensus 334 --~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 334 --DDADGMAAALIGILEDD 350 (406)
T ss_dssp --TCHHHHHHHHHHHHHCH
T ss_pred --CCHHHHHHHHHHHHcCH
Confidence 36899999999999885
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.93 E-value=1e-07 Score=92.56 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=90.5
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCC----ce-EEEEeCCcccccccccccccCCCCCCCCCChhHHH---hhC-C
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQ----RF-LWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTK-G 325 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~-~ 325 (462)
..+++..|+... .+.+..++++++.... .+ ++.++.+.. +.+.+ +.. .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---------------------~~~~~~~~~~~~~ 252 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---------------------RKFEALAEKLGVR 252 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---------------------HHHHHHHHHHTCG
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---------------------HHHHHHHHHcCCC
Confidence 467777888532 2345667777776532 22 333443211 22222 222 3
Q ss_pred CceEeccCcch-hhhhcccccccccc----ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcc
Q 012513 326 VGLVVPSWSPQ-VQVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 400 (462)
Q Consensus 326 ~~~~~~~~~pq-~~lL~~~~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~ 400 (462)
+++.+.++..+ ..++..++ ++|. .|..++++||+++|+|+|+.+.. .+...+++ -+.|..+...
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~~---- 321 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIAD-ANCGTVIAEP---- 321 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHH-HTCEEEECSS----
T ss_pred CcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhhcc-CCceEEeCCC----
Confidence 57777787554 67888888 5664 56778999999999999997653 45556676 6788877522
Q ss_pred cCHHHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012513 401 VGREDIANYAKGLIQGEE-GKLLRKKMRALK 430 (462)
Q Consensus 401 ~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~ 430 (462)
-+.++++++|.++++|++ ...+.+++++..
T Consensus 322 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 352 (374)
T 2iw1_A 322 FSQEQLNEVLRKALTQSPLRMAWAENARHYA 352 (374)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 478999999999998852 233444444443
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.93 E-value=3.2e-08 Score=97.64 Aligned_cols=109 Identities=14% Similarity=0.116 Sum_probs=75.8
Q ss_pred CceEeccCcc---hhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 326 VGLVVPSWSP---QVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 326 ~~~~~~~~~p---q~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
.++.+.++++ ...++..++ ++|+-.|. .+.||.++|+|+|++|-.++++.. + + .|.|+.+. .+
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e~---v-~-~g~~~lv~------~d 347 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSGG-VQEEAPGMGVPVLVLRDTTERPEG---I-E-AGTLKLIG------TN 347 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCHH-HHHHGGGTTCCEEECCSSCSCHHH---H-H-HTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCcc-HHHHHHHhCCCEEEecCCCcchhh---e-e-CCcEEEcC------CC
Confidence 4787888886 367888899 78887752 236999999999999766666642 3 4 58777654 47
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHh
Q 012513 403 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWK 455 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 455 (462)
.++|.+++.++++|+ ..++++.+-+ .. ...++++.+.++.+.+.+.
T Consensus 348 ~~~l~~ai~~ll~~~---~~~~~m~~~~---~~-~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 348 KENLIKEALDLLDNK---ESHDKMAQAA---NP-YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHHHHHHCH---HHHHHHHHSC---CT-TCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCH---HHHHHHHhhc---Cc-ccCCcHHHHHHHHHHHHhC
Confidence 899999999999884 5554443222 21 2356777776666666554
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.90 E-value=1.2e-07 Score=96.21 Aligned_cols=81 Identities=19% Similarity=0.002 Sum_probs=59.1
Q ss_pred CCceEeccCcchh---hhhccc----ccccccc----ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEe
Q 012513 325 GVGLVVPSWSPQV---QVLRHG----STGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRV 393 (462)
Q Consensus 325 ~~~~~~~~~~pq~---~lL~~~----~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~ 393 (462)
.+++.+.+++|+. .++..+ + +||. -|-.++++||+++|+|+|+.... .....+.. -..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~-~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDG-GKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGG-GTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcC-CceEEEe
Confidence 3578888999864 567778 7 4552 24456899999999999987643 34445555 4567776
Q ss_pred eecCCcccCHHHHHHHHHHHhcCc
Q 012513 394 KVNENGLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 394 ~~~~~~~~~~~~l~~ai~~vl~~~ 417 (462)
.. -+.++++++|.++++|+
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESE 425 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCH
T ss_pred CC-----CCHHHHHHHHHHHHhCH
Confidence 53 37899999999999985
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.89 E-value=2e-08 Score=98.95 Aligned_cols=85 Identities=14% Similarity=0.107 Sum_probs=60.9
Q ss_pred CceEeccCcc---hhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 326 VGLVVPSWSP---QVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 326 ~~~~~~~~~p---q~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
.++.+.++++ ...++..++ ++|+-.| |.+.||.++|+|+|+..-..+++. .+ + .|.++.+. .+
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv~------~d 353 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLVG------TN 353 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEECT------TC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEcC------CC
Confidence 4777766664 467888899 7998887 666799999999999854444432 23 4 47775442 36
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHH
Q 012513 403 REDIANYAKGLIQGEEGKLLRKKMR 427 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~~~~~~r~~a~ 427 (462)
.++|.+++.++++|+ ..++++.
T Consensus 354 ~~~l~~ai~~ll~d~---~~~~~m~ 375 (396)
T 3dzc_A 354 QQQICDALSLLLTDP---QAYQAMS 375 (396)
T ss_dssp HHHHHHHHHHHHHCH---HHHHHHH
T ss_pred HHHHHHHHHHHHcCH---HHHHHHh
Confidence 899999999999885 5444433
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.87 E-value=6.8e-08 Score=94.03 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=57.9
Q ss_pred CceEeccCcch---hhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 326 VGLVVPSWSPQ---VQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 326 ~~~~~~~~~pq---~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
+++.+.+++++ ..++..++ +||+..| +.++||+++|+|+|+....+..++ .+ + .|.|..+. .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e---~v-~-~g~g~~v~------~d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERPE---GI-E-AGTLKLAG------TD 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCHH---HH-H-TTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCce---ee-c-CCceEEcC------CC
Confidence 57888677765 56778888 7888763 558899999999999854333322 23 3 47787764 36
Q ss_pred HHHHHHHHHHHhcCc
Q 012513 403 REDIANYAKGLIQGE 417 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~ 417 (462)
.++++++|.++++|+
T Consensus 329 ~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 329 EETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 799999999999884
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.86 E-value=1.6e-06 Score=84.97 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=72.0
Q ss_pred CceEeccCcch-hhhhccccccccc----cccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcc
Q 012513 326 VGLVVPSWSPQ-VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 400 (462)
Q Consensus 326 ~~~~~~~~~pq-~~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~ 400 (462)
+++.+.++..+ ..++..++ ++| ..|..++++||+++|+|+|+.+.. .....+.+ -+.|..+..
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~-~~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH-GDTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB-TTTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc-CCceEEeCC-----
Confidence 46767776543 67888888 666 556678999999999999997753 23334444 456776653
Q ss_pred cCHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 401 VGREDIANYAKGLIQGEE-GKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 401 ~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
-+.++++++|.++++|++ ...+.+++++. +++ .-+.....+++.+-+++.
T Consensus 335 ~d~~~la~~i~~l~~~~~~~~~~~~~~~~~---~~~----~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDEELHRNMGERARES---VYE----QFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHHHHHHH---HHH----HSCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH---HHH----hCCHHHHHHHHHHHHHHH
Confidence 378999999999999852 22333333333 221 234444455555554444
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.72 E-value=9.1e-07 Score=84.95 Aligned_cols=126 Identities=16% Similarity=0.164 Sum_probs=77.3
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcch
Q 012513 257 LFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQ 336 (462)
Q Consensus 257 v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq 336 (462)
+++..|+.. ..+.+..++++++..+.++++ ++.+.. ...+ ..+.++.+ +++.+.+|+|+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~----------------~~~l-~~~~~~~~-~~v~~~g~~~~ 222 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWE----------------PEYF-DEITRRYG-STVEPIGEVGG 222 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCC----------------HHHH-HHHHHHHT-TTEEECCCCCH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCccc----------------HHHH-HHHHHHhC-CCEEEeccCCH
Confidence 455567753 334566777888777666444 343211 0000 11222333 68888999998
Q ss_pred h---hhhccccccccc--c------------ccCchhHHHHHHhCCceeecccccchhhhhHHhhcc-cceeEEeeecCC
Q 012513 337 V---QVLRHGSTGGFL--S------------HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDD-LKVSFRVKVNEN 398 (462)
Q Consensus 337 ~---~lL~~~~~~~~I--~------------HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~-~g~G~~~~~~~~ 398 (462)
. .++..++ ++| + -|-.++++||+++|+|+|+....+ ....+... -+.|..+.
T Consensus 223 ~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~---- 292 (342)
T 2iuy_A 223 ERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTD---- 292 (342)
T ss_dssp HHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSC----
T ss_pred HHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcC----
Confidence 5 7788888 455 2 233568999999999999987642 33333330 12444332
Q ss_pred cccCHHHHHHHHHHHhc
Q 012513 399 GLVGREDIANYAKGLIQ 415 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~ 415 (462)
. +.++++++|.++++
T Consensus 293 -~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -F-APDEARRTLAGLPA 307 (342)
T ss_dssp -C-CHHHHHHHHHTSCC
T ss_pred -C-CHHHHHHHHHHHHH
Confidence 2 68899999999986
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.56 E-value=5e-05 Score=74.79 Aligned_cols=112 Identities=14% Similarity=0.075 Sum_probs=71.4
Q ss_pred CCceEeccCcc---h---hhhhccccccccccc----cCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEee
Q 012513 325 GVGLVVPSWSP---Q---VQVLRHGSTGGFLSH----CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVK 394 (462)
Q Consensus 325 ~~~~~~~~~~p---q---~~lL~~~~~~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~ 394 (462)
.+++.+.+|++ + ..++..++ ++|.- |..++++||+++|+|+|+.+. ..+...+.. -+.|..+.
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC
Confidence 35788888775 2 46777888 55543 356789999999999999764 345555666 56777664
Q ss_pred ecCCcccCHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 395 VNENGLVGREDIANYAKGLIQGEE-GKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 395 ~~~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
+.++++++|.++++|++ ...+.+++++. ++ +.-+.....+++.+-+++.
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~---~~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKER---VR----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHH---HH----HHTBHHHHHHHHHHHHHTC
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HH----HHcCHHHHHHHHHHHHHHh
Confidence 57899999999998852 12233333332 22 1234445555555555443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.39 E-value=2e-06 Score=84.07 Aligned_cols=129 Identities=14% Similarity=0.114 Sum_probs=81.7
Q ss_pred CeEEEEEeCCCCCCC-HHHHHHHHHHHHhC----CCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHh---h-C
Q 012513 254 ESVLFVCFGSGGTLS-QEQLNELALGLEMS----GQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDR---T-K 324 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~-~~~~~~i~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~ 324 (462)
++.+.++.|...... .+.+..+++|++.. +..+|+....... +...+. . .
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~---------------------~~l~~~~~~~~~ 261 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK---------------------KRLEDLEGFKEL 261 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH---------------------HHHHTSGGGGGT
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH---------------------HHHHHHHHHhcC
Confidence 458888888753332 24566777777653 4566665431110 000000 1 1
Q ss_pred CCceEeccCcc---hhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCccc
Q 012513 325 GVGLVVPSWSP---QVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLV 401 (462)
Q Consensus 325 ~~~~~~~~~~p---q~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~ 401 (462)
..++.+.+..+ ...++.+++ ++|+-.|. .+.||.+.|+|+|+++-..+.+. .+ + .|.++.+. .
T Consensus 262 ~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~-~G~~~lv~------~ 327 (385)
T 4hwg_A 262 GDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE---GM-D-AGTLIMSG------F 327 (385)
T ss_dssp GGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-H-HTCCEECC------S
T ss_pred CCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-h-cCceEEcC------C
Confidence 23676655554 467899999 88988775 46899999999999987554333 23 3 47776553 4
Q ss_pred CHHHHHHHHHHHhcCc
Q 012513 402 GREDIANYAKGLIQGE 417 (462)
Q Consensus 402 ~~~~l~~ai~~vl~~~ 417 (462)
+.++|.+++.++++|+
T Consensus 328 d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 328 KAERVLQAVKTITEEH 343 (385)
T ss_dssp SHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7899999999999886
No 40
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.28 E-value=7.1e-06 Score=70.77 Aligned_cols=139 Identities=10% Similarity=0.066 Sum_probs=88.2
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCC-CceEEEEeCCcccccccccccccCCCCCCCCCChhHHH--h-hCCCceEec
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSG-QRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD--R-TKGVGLVVP 331 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~-~~~~~~~~~ 331 (462)
.+++.+|+.. ..+.+..++++++..+ ..+++ ++.... ...+ ..+.+ + --.+++.+.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i-~G~~~~----------------~~~l-~~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSK----------------GDHA-ERYARKIMKIAPDNVKFL 83 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCT----------------TSTH-HHHHHHHHHHSCTTEEEE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEE-EecCcc----------------HHHH-HHHHHhhhcccCCcEEEe
Confidence 4556678853 2345677888888874 34333 443221 0111 11111 1 123578888
Q ss_pred cCcch---hhhhcccccccccc---ccC-chhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHH
Q 012513 332 SWSPQ---VQVLRHGSTGGFLS---HCG-WNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGRE 404 (462)
Q Consensus 332 ~~~pq---~~lL~~~~~~~~I~---HGG-~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~ 404 (462)
+|+|+ ..++..++ ++|. +.| .++++||+++|+|+|+... ..+...+.+ -+.|..+ . -+.+
T Consensus 84 g~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~--~----~d~~ 150 (177)
T 2f9f_A 84 GSVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV--N----ADVN 150 (177)
T ss_dssp ESCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE--C----SCHH
T ss_pred CCCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe--C----CCHH
Confidence 99997 67788888 4554 334 4599999999999998754 455556666 5678777 3 4789
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHH
Q 012513 405 DIANYAKGLIQGEEGKLLRKKMRAL 429 (462)
Q Consensus 405 ~l~~ai~~vl~~~~~~~~r~~a~~l 429 (462)
+++++|.++++|++ .+++++++.
T Consensus 151 ~l~~~i~~l~~~~~--~~~~~~~~~ 173 (177)
T 2f9f_A 151 EIIDAMKKVSKNPD--KFKKDCFRR 173 (177)
T ss_dssp HHHHHHHHHHHCTT--TTHHHHHHH
T ss_pred HHHHHHHHHHhCHH--HHHHHHHHH
Confidence 99999999998863 224444443
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.26 E-value=3.2e-05 Score=82.23 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=57.9
Q ss_pred CceEecc----Ccchhhhhc----ccccccccc----ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEe
Q 012513 326 VGLVVPS----WSPQVQVLR----HGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRV 393 (462)
Q Consensus 326 ~~~~~~~----~~pq~~lL~----~~~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~ 393 (462)
+++...+ ++|+.++.. .++ +||. -|-..+++||+++|+|+|+.. .......+.. -+.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~d-g~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVH-GKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCB-TTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHcc-CCcEEEe
Confidence 5677777 444555554 345 4552 344569999999999999964 3345555556 4678777
Q ss_pred eecCCcccCHHHHHHHHHHHh----cCch-HHHHHHHHHH
Q 012513 394 KVNENGLVGREDIANYAKGLI----QGEE-GKLLRKKMRA 428 (462)
Q Consensus 394 ~~~~~~~~~~~~l~~ai~~vl----~~~~-~~~~r~~a~~ 428 (462)
+. -+.++++++|.+++ .|++ ...+.+++++
T Consensus 713 ~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 713 DP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp CT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 63 36788999997766 6752 3334444433
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.19 E-value=0.0014 Score=67.13 Aligned_cols=83 Identities=17% Similarity=0.133 Sum_probs=56.9
Q ss_pred CceEeccCcch---hhhhccccccccc---cccCchhHHHHHHhCCceeecccccchhhh-hHHhhcccceeEEeeecCC
Q 012513 326 VGLVVPSWSPQ---VQVLRHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYSEQKMN-AVLLTDDLKVSFRVKVNEN 398 (462)
Q Consensus 326 ~~~~~~~~~pq---~~lL~~~~~~~~I---~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~-a~rv~~~~g~G~~~~~~~~ 398 (462)
++|++.+++|+ ..++..++ +|| .+|+.++++||+++|+|+|++|-..=.... +..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 57888899985 45677888 554 237778999999999999997743111111 223333 45543332
Q ss_pred cccCHHHHHHHHHHHhcCc
Q 012513 399 GLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~~~ 417 (462)
-+.+++.+++.++++|+
T Consensus 507 --~~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASDP 523 (568)
T ss_dssp --SSHHHHHHHHHHHHHCH
T ss_pred --CCHHHHHHHHHHHhcCH
Confidence 27889999999999985
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.18 E-value=8.3e-05 Score=74.82 Aligned_cols=111 Identities=9% Similarity=-0.081 Sum_probs=69.3
Q ss_pred CceE-eccCcch--hhhhccccccccc----cccCchhHHHHHHhCCceeecccccchhhhhHHhhccc---------ce
Q 012513 326 VGLV-VPSWSPQ--VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDL---------KV 389 (462)
Q Consensus 326 ~~~~-~~~~~pq--~~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~---------g~ 389 (462)
+++. +.++... ..++..++ +|| .-|..++++||+++|+|+|+.... .....+.. - +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-Cccccccccccc
Confidence 4664 6677333 36788888 455 234456889999999999997653 34444555 3 57
Q ss_pred eEEeeecCCcccCHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 390 SFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 390 G~~~~~~~~~~~~~~~l~~ai~~vl---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
|..+.. -+.++++++|.+++ .|+ ..+++.. +..++ +.-+-....+++++-+++.
T Consensus 420 G~l~~~-----~d~~~la~~i~~ll~~~~~~---~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 420 GFVFED-----SNAWSLLRAIRRAFVLWSRP---SLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp BEEECS-----SSHHHHHHHHHHHHHHHTSH---HHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred eEEECC-----CCHHHHHHHHHHHHHHcCCH---HHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHh
Confidence 777653 37899999999999 564 3333222 22222 3555555555555555443
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.16 E-value=7.6e-05 Score=75.09 Aligned_cols=111 Identities=11% Similarity=-0.024 Sum_probs=69.5
Q ss_pred CceE-eccCcch--hhhhccccccccc----cccCchhHHHHHHhCCceeecccccchhhhhHHhhccc---------ce
Q 012513 326 VGLV-VPSWSPQ--VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDL---------KV 389 (462)
Q Consensus 326 ~~~~-~~~~~pq--~~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~---------g~ 389 (462)
++++ ..++... ..++..++ +|| .-|-.++++||+++|+|+|+.... .....+.. - +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCc
Confidence 4665 5677333 25788888 555 234456999999999999997653 34444555 3 57
Q ss_pred eEEeeecCCcccCHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 390 SFRVKVNENGLVGREDIANYAKGLI---QGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 390 G~~~~~~~~~~~~~~~l~~ai~~vl---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
|..+.. -+.++++++|.+++ .|+ ..+++. ++..++ +.-+.....+++++-+++.
T Consensus 419 G~l~~~-----~d~~~la~~i~~ll~~~~~~---~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 419 GVQFSP-----VTLDGLKQAIRRTVRYYHDP---KLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp BEEESS-----CSHHHHHHHHHHHHHHHTCH---HHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred ceEeCC-----CCHHHHHHHHHHHHHHhCCH---HHHHHH---HHHHHH---HhCChHHHHHHHHHHHHHh
Confidence 777653 37899999999999 664 333322 222222 4555555555555554443
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.78 E-value=0.006 Score=59.73 Aligned_cols=76 Identities=9% Similarity=-0.028 Sum_probs=55.2
Q ss_pred CceEeccCcchh---hhhcccccccccc--ccCchhHHHHH-------HhCCceeecccccchhhhhHHhhcccceeEE-
Q 012513 326 VGLVVPSWSPQV---QVLRHGSTGGFLS--HCGWNSILESI-------VHGVPIIAWPLYSEQKMNAVLLTDDLKVSFR- 392 (462)
Q Consensus 326 ~~~~~~~~~pq~---~lL~~~~~~~~I~--HGG~~t~~eal-------~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~- 392 (462)
++|.+.+++|++ .++..+++-++-+ -|-.++++||+ ++|+|+|+... +.. -..|..
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~l~ 333 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSRFG 333 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSEEE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceEEE
Confidence 378888999875 4677788422212 23446789999 99999999765 455 455765
Q ss_pred eeecCCcccCHHHHHHHHHHHhcCc
Q 012513 393 VKVNENGLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 393 ~~~~~~~~~~~~~l~~ai~~vl~~~ 417 (462)
+.. -+.++++++|.++++++
T Consensus 334 v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 334 YTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp ECT-----TCHHHHHHHHHHHHHCC
T ss_pred eCC-----CCHHHHHHHHHHHHhCc
Confidence 543 37899999999999986
No 46
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.53 E-value=0.0018 Score=56.29 Aligned_cols=78 Identities=13% Similarity=-0.014 Sum_probs=57.7
Q ss_pred ceEe-ccCcch---hhhhcccccccccc----ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCC
Q 012513 327 GLVV-PSWSPQ---VQVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNEN 398 (462)
Q Consensus 327 ~~~~-~~~~pq---~~lL~~~~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~ 398 (462)
++.+ .+++|+ ..++..++ ++|. -|...+++||+++|+|+|+.... .....+ . -+.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEecC---
Confidence 7888 899985 46777888 4553 23356899999999999987643 444455 4 567776653
Q ss_pred cccCHHHHHHHHHHHhc-Cc
Q 012513 399 GLVGREDIANYAKGLIQ-GE 417 (462)
Q Consensus 399 ~~~~~~~l~~ai~~vl~-~~ 417 (462)
-+.++++++|.++++ |+
T Consensus 165 --~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 165 --GDPGELANAILKALELSR 182 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCH
T ss_pred --CCHHHHHHHHHHHHhcCH
Confidence 378999999999998 86
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.49 E-value=0.0012 Score=55.67 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=79.0
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCC--ceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhC--CCceEe
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQ--RFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK--GVGLVV 330 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~ 330 (462)
+++++..|.... .+.+..++++++.+.. .+-+.+-+... ..+.+.+..+ +.++.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------------------~~~~~~~~~~~~~~~v~~ 60 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-------------------DEKKIKLLAQKLGVKAEF 60 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-------------------THHHHHHHHHHHTCEEEC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-------------------cHHHHHHHHHHcCCeEEE
Confidence 367777888632 3446667777776532 33333322211 1122222221 226777
Q ss_pred ccCcchh---hhhcccccccccc----ccCchhHHHHHHhCC-ceeecccccchhhhhHHhhcccceeEEeeecCCcccC
Q 012513 331 PSWSPQV---QVLRHGSTGGFLS----HCGWNSILESIVHGV-PIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVG 402 (462)
Q Consensus 331 ~~~~pq~---~lL~~~~~~~~I~----HGG~~t~~eal~~Gv-P~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~ 402 (462)
+|+|+. .++..++ ++|. -|..++++||+++|+ |+|+....+ .....+.. -+. .+. . -+
T Consensus 61 -g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~-~~~--~~~-~----~~ 126 (166)
T 3qhp_A 61 -GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALD-ERS--LFE-P----NN 126 (166)
T ss_dssp -CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSS-GGG--EEC-T----TC
T ss_pred -eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccC-Cce--EEc-C----CC
Confidence 999874 5677788 4553 344569999999996 999933221 11122223 222 222 1 47
Q ss_pred HHHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012513 403 REDIANYAKGLIQGEE-GKLLRKKMRALK 430 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~~-~~~~r~~a~~l~ 430 (462)
.+++.++|.++++|++ ...+.+++++..
T Consensus 127 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 127 AKDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 8999999999999862 334444444443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.32 E-value=0.0027 Score=67.07 Aligned_cols=97 Identities=13% Similarity=0.221 Sum_probs=73.1
Q ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHh-----hCCCce
Q 012513 254 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDR-----TKGVGL 328 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----~~~~~~ 328 (462)
..+||.+|-.....+++.+..-.+-|++.+.-++|....+.. ..+.+.++ +..+.+
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-------------------~~~~l~~~~~~~gi~~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-------------------GEPNIQQYAQNMGLPQNRI 582 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-------------------GHHHHHHHHHHTTCCGGGE
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-------------------HHHHHHHHHHhcCCCcCeE
Confidence 459999999988899999999888899999999998876432 00122221 223467
Q ss_pred EeccCcchhh---hhcccccccccc---ccCchhHHHHHHhCCceeecc
Q 012513 329 VVPSWSPQVQ---VLRHGSTGGFLS---HCGWNSILESIVHGVPIIAWP 371 (462)
Q Consensus 329 ~~~~~~pq~~---lL~~~~~~~~I~---HGG~~t~~eal~~GvP~v~~P 371 (462)
++.+..|..+ .+..++ +++. .+|.+|+.|||+.|||+|.++
T Consensus 583 ~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 583 IFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp EEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred EECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 7778888654 445566 6765 899999999999999999999
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.32 E-value=0.0039 Score=63.52 Aligned_cols=138 Identities=12% Similarity=0.013 Sum_probs=86.7
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEE--eCCcccccccccccccCCCCCCCCCChhHHH-hhCCCceEec
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVA--KSPHEEAANATYFSVQSMKDPLDFLPKGFLD-RTKGVGLVVP 331 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~ 331 (462)
.++|.+|.......++.++...+-+++.+..++|.. +.... ....+-..+.+ .+. +.+++.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g---------------~~~~~~~~~~~~GI~-~Rv~F~ 504 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG---------------ITHPYVERFIKSYLG-DSATAH 504 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG---------------GGHHHHHHHHHHHHG-GGEEEE
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch---------------hhHHHHHHHHHcCCC-ccEEEc
Confidence 489999999888889988888888888888877753 32111 00000011111 122 356677
Q ss_pred cCcchhhhh---ccccccccc---cccCchhHHHHHHhCCceeecccccchhhh-hHHhhcccceeEE-eeecCCcccCH
Q 012513 332 SWSPQVQVL---RHGSTGGFL---SHCGWNSILESIVHGVPIIAWPLYSEQKMN-AVLLTDDLKVSFR-VKVNENGLVGR 403 (462)
Q Consensus 332 ~~~pq~~lL---~~~~~~~~I---~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~-a~rv~~~~g~G~~-~~~~~~~~~~~ 403 (462)
+.+|+.+.+ ..++ +|+ ..+|..|++|||++|||+|+++-..=.-.. +..+.. .|+.-. +. -+.
T Consensus 505 g~~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~ 575 (631)
T 3q3e_A 505 PHSPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTV 575 (631)
T ss_dssp CCCCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSH
T ss_pred CCCCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCH
Confidence 888876544 6777 443 347889999999999999998833211111 122334 455431 32 367
Q ss_pred HHHHHHHHHHhcCc
Q 012513 404 EDIANYAKGLIQGE 417 (462)
Q Consensus 404 ~~l~~ai~~vl~~~ 417 (462)
++..+..-++.+|+
T Consensus 576 eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 576 DEYVERAVRLAENH 589 (631)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHhCCH
Confidence 78888888888885
No 50
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.28 E-value=0.0027 Score=62.07 Aligned_cols=78 Identities=10% Similarity=0.031 Sum_probs=52.6
Q ss_pred eEeccCcch---hhhhccccccccc----cccCchhHHHHHHhCCceeecccccchhhhhHHhhcccc------------
Q 012513 328 LVVPSWSPQ---VQVLRHGSTGGFL----SHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLK------------ 388 (462)
Q Consensus 328 ~~~~~~~pq---~~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g------------ 388 (462)
+.+.+|+|+ ..++..++ ++| .-|..++++||+++|+|+|+.... .....+..+..
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccc
Confidence 666799995 45677788 455 234456999999999999986643 33333433111
Q ss_pred --eeE--EeeecCCcccCHHHHHHHHHHHhcCc
Q 012513 389 --VSF--RVKVNENGLVGREDIANYAKGLIQGE 417 (462)
Q Consensus 389 --~G~--~~~~~~~~~~~~~~l~~ai~~vl~~~ 417 (462)
.|. .+.. -+.++++++| ++++|+
T Consensus 330 ~~~G~~gl~~~-----~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 330 DRDGIGGIEGI-----IDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp TTCSSCCEEEE-----CCHHHHHHHH-HHTTSH
T ss_pred cccCcceeeCC-----CCHHHHHHHH-HHhcCH
Confidence 144 4432 3789999999 999985
No 51
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.14 E-value=0.002 Score=62.51 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=68.6
Q ss_pred ceEeccCcc-hhhhhcccccccccc---c--cCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcc
Q 012513 327 GLVVPSWSP-QVQVLRHGSTGGFLS---H--CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGL 400 (462)
Q Consensus 327 ~~~~~~~~p-q~~lL~~~~~~~~I~---H--GG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~ 400 (462)
++.+.++.. -..++..++ +|+. . +|.++++||+++|+|+|+-|..++..+....+.+ .|.++.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe-------
Confidence 455555443 377888888 5432 2 3457899999999999987777777766665555 5766654
Q ss_pred cCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012513 401 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAA 434 (462)
Q Consensus 401 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 434 (462)
-+.+++++++.++++|+....+.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 2578999999999987325578888877765544
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.06 E-value=0.0015 Score=62.23 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=81.0
Q ss_pred ceEeccCcchhhhh---ccccccccccccCc---------hhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEee
Q 012513 327 GLVVPSWSPQVQVL---RHGSTGGFLSHCGW---------NSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVK 394 (462)
Q Consensus 327 ~~~~~~~~pq~~lL---~~~~~~~~I~HGG~---------~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~ 394 (462)
|+...+|+|++++. ..++.+++..-+.+ +-+.|++++|+|+|+.+ ...++..+++ .++|+.+.
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 78888999997764 44566555533332 35789999999999865 4467777888 89999874
Q ss_pred ecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 012513 395 VNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRW 454 (462)
Q Consensus 395 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 454 (462)
+.+++.+++..+. .++...+++|+++.++.++ .|-..++.+.+.+.+|
T Consensus 290 -------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 3578888888864 3456789999999988888 4666666666665544
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.46 E-value=0.11 Score=49.52 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCCCCCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPTIDDG 53 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~~~~~ 53 (462)
..+||+++-..+.|++.=...+.+.|+++. +.+|++++.+.+.+
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~ 51 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQ 51 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGG
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhH
Confidence 468999999999999999999999998764 79999999875443
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.29 E-value=1.9 Score=40.39 Aligned_cols=38 Identities=11% Similarity=0.293 Sum_probs=33.5
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~ 49 (462)
|||+++.....|++.=...+.+.|+++. +.+|++++.+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 6899999999999988899999997653 7999999986
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.15 E-value=0.066 Score=52.41 Aligned_cols=78 Identities=19% Similarity=0.038 Sum_probs=54.4
Q ss_pred ceEeccCcchh---hhhcccccccccc--c--cCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCc
Q 012513 327 GLVVPSWSPQV---QVLRHGSTGGFLS--H--CGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENG 399 (462)
Q Consensus 327 ~~~~~~~~pq~---~lL~~~~~~~~I~--H--GG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~ 399 (462)
++...+++|++ .++..++ +||. . |=.++++||+++|+|+|+ -..+ ....++. -..|+.+..
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~---- 363 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQ---- 363 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESS----
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCC----
Confidence 67788999874 5677788 5553 2 223578999999999998 3222 1233444 346776653
Q ss_pred ccCHHHHHHHHHHHhcCc
Q 012513 400 LVGREDIANYAKGLIQGE 417 (462)
Q Consensus 400 ~~~~~~l~~ai~~vl~~~ 417 (462)
-++++++++|.++++|+
T Consensus 364 -~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 -LNPENIAETLVELCMSF 380 (413)
T ss_dssp -CSHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHcCH
Confidence 47899999999999875
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.09 E-value=1.7 Score=43.80 Aligned_cols=83 Identities=10% Similarity=-0.070 Sum_probs=51.4
Q ss_pred CceEeccCcchh---hhhcccccccccc----ccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecC-
Q 012513 326 VGLVVPSWSPQV---QVLRHGSTGGFLS----HCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE- 397 (462)
Q Consensus 326 ~~~~~~~~~pq~---~lL~~~~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~- 397 (462)
.++.+..+.+.. .++..++ +||. -|=..+++||+++|+|+|+.... .....|.+ -..|.......
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~d-g~~G~~~~~~~~ 454 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIE-GKTGFHMGRLSV 454 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCB-TTTEEECCCCCS
T ss_pred CceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeC-CCCccccccCCC
Confidence 456565666653 4677788 5553 23335899999999999987654 34444555 34565443221
Q ss_pred Cc-c---cCHHHHHHHHHHHhc
Q 012513 398 NG-L---VGREDIANYAKGLIQ 415 (462)
Q Consensus 398 ~~-~---~~~~~l~~ai~~vl~ 415 (462)
++ . -+.++++++|++++.
T Consensus 455 ~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 455 DCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEECCCCHHHHHHHHHHHHH
Confidence 11 1 246789999988775
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.13 E-value=0.11 Score=52.68 Aligned_cols=44 Identities=20% Similarity=0.355 Sum_probs=28.8
Q ss_pred CccccCCCCCCcEEEEEcC--------CCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 1 METQNSKQIPRAHVAMVPT--------PGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 1 m~~~~~~~~~~~~ill~~~--------p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|++.+-+ .+|||+++++ ++.|+ -.-.|.++|+++ ||+|++++|.
T Consensus 1 ~~~~~~~--~~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~-G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHH--HHMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAAN-GHRVMVISPR 52 (536)
T ss_dssp ---------CCCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTT-TCEEEEEEEC
T ss_pred CCcccCC--CCcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHc-CCeEEEEecC
Confidence 4444433 3899999974 22333 366899999887 9999999975
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=85.78 E-value=5 Score=39.76 Aligned_cols=107 Identities=10% Similarity=0.011 Sum_probs=67.2
Q ss_pred eccCcchhh---hhcccccccccc---ccCch-hHHHHHHhCC-----ceeecccccchhhhhHHhhcccceeEEeeecC
Q 012513 330 VPSWSPQVQ---VLRHGSTGGFLS---HCGWN-SILESIVHGV-----PIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE 397 (462)
Q Consensus 330 ~~~~~pq~~---lL~~~~~~~~I~---HGG~~-t~~eal~~Gv-----P~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~ 397 (462)
+.+++|+.+ ++..++ +||. .=|+| ++.||+++|+ |+|+--+.+--.. +..|+.++.
T Consensus 336 ~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEECC--
Confidence 457888754 566788 4543 33554 8999999998 6666554432221 223555542
Q ss_pred CcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhcC
Q 012513 398 NGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKNP 457 (462)
Q Consensus 398 ~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 457 (462)
.+.++++++|.+++++++ ...+++.++..+.+++ -+...-.+.+++.|++.
T Consensus 404 ---~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 ---YDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp ---TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 478999999999998641 1344444555555543 35667777777777654
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=83.68 E-value=0.52 Score=45.92 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCc-----CCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 10 PRAHVAMVPTPGM-----GHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 10 ~~~~ill~~~p~~-----GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
.+|||++++.... |=.+....||++|+++ ||+|+++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 4799999886422 4446689999999887 99999999864
No 60
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=81.03 E-value=9 Score=32.44 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=52.2
Q ss_pred cEEEEEc--CCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCCC
Q 012513 12 AHVAMVP--TPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDNV 89 (462)
Q Consensus 12 ~~ill~~--~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 89 (462)
|+++.+. -++.|=-.-...||..|+++ |++|.++-..... .....+...+.++.....+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~~~-------~~~~~~~~~~~~~~~~~~~~---------- 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDPQM-------SLTNWSKAGKAAFDVFTAAS---------- 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCTTC-------HHHHHHTTSCCSSEEEECCS----------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCCCC-------CHHHHHhcCCCCCcEEecCc----------
Confidence 4455444 36889899999999999987 9999998765222 23333333333444443221
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcc
Q 012513 90 PIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGS 129 (462)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~ 129 (462)
..+.+.++.+ ...+|+||.|.-..
T Consensus 63 --------------~~l~~~l~~l--~~~yD~viiD~~~~ 86 (206)
T 4dzz_A 63 --------------EKDVYGIRKD--LADYDFAIVDGAGS 86 (206)
T ss_dssp --------------HHHHHTHHHH--TTTSSEEEEECCSS
T ss_pred --------------HHHHHHHHHh--cCCCCEEEEECCCC
Confidence 3344455554 23699999997543
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.08 E-value=9.4 Score=37.84 Aligned_cols=110 Identities=10% Similarity=-0.010 Sum_probs=69.6
Q ss_pred ceEeccCcchh---hhhcccccccccc--ccCchh-HHHHHHhC---CceeecccccchhhhhHHhhcccc-eeEEeeec
Q 012513 327 GLVVPSWSPQV---QVLRHGSTGGFLS--HCGWNS-ILESIVHG---VPIIAWPLYSEQKMNAVLLTDDLK-VSFRVKVN 396 (462)
Q Consensus 327 ~~~~~~~~pq~---~lL~~~~~~~~I~--HGG~~t-~~eal~~G---vP~v~~P~~~DQ~~~a~rv~~~~g-~G~~~~~~ 396 (462)
.|+..+.+|+. +++..+++ ++++ .=|+|. ..||+++| .|+|+--+.+--. . +| .|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~-------~-l~~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAE-------V-LGEYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHH-------H-HGGGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHH-------H-hCCCEEEECC-
Confidence 46666788874 55556774 3333 468884 58999996 6666655443211 1 22 3666653
Q ss_pred CCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhc
Q 012513 397 ENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKN 456 (462)
Q Consensus 397 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 456 (462)
.+.++++++|.++|++++ ++-+++.+++.+.++ .-....=.+.+++.|+.
T Consensus 423 ----~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 478999999999998641 244555555555554 34566777788887764
No 62
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=75.27 E-value=19 Score=33.14 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=35.6
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCCCCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPTIDD 52 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~~~~ 52 (462)
|||+++-..+.|++.=...+.+.|+++. +.+|++++.+.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~ 42 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFA 42 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhh
Confidence 6899999999999999999999998764 7999999987443
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=73.59 E-value=35 Score=29.05 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=62.4
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCC-CCCCCCCchhhhhhhcCCCCeeEEeCCCCCCCCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTID-DGTGSFMQPQRQVLESLPTSISTIFLPPVSLDDLPDNV 89 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 89 (462)
+-.|.+++.++.|--.-.+.+|.+.+.+ |++|.|+..-.- .. ......+..+ ++.+..+.....+ ..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~-----~gE~~~l~~L--~v~~~~~g~gf~~----~~ 95 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWP-----NGERNLLEPH--GVEFQVMATGFTW----ET 95 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSC-----CHHHHHHGGG--TCEEEECCTTCCC----CG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCC-----ccHHHHHHhC--CcEEEEccccccc----CC
Confidence 4578999999999999999999999887 999999975321 11 1333444545 3777766542211 11
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEeCCCcc
Q 012513 90 PIETRIILTLVRSLSSLRDALKVLTESTRLVALVVDCFGS 129 (462)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~D~vI~D~~~~ 129 (462)
.... .........+....+ .+.+..+|+||.|.+..
T Consensus 96 ~~~~---~~~~~a~~~l~~a~~-~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 96 QNRE---ADTAACMAVWQHGKR-MLADPLLDMVVLDELTY 131 (196)
T ss_dssp GGHH---HHHHHHHHHHHHHHH-HTTCTTCSEEEEETHHH
T ss_pred CCcH---HHHHHHHHHHHHHHH-HHhcCCCCEEEEeCCCc
Confidence 1111 122222333333333 33456899999998643
No 64
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=73.57 E-value=3.9 Score=35.44 Aligned_cols=40 Identities=18% Similarity=0.137 Sum_probs=34.0
Q ss_pred CCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 8 QIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 8 ~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|.+++||++.-.++.|-+. ...|.+.|.++ |++|.++.++
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECc
Confidence 3456789999999977777 89999999887 9999999876
No 65
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=72.65 E-value=4.8 Score=41.52 Aligned_cols=47 Identities=23% Similarity=0.193 Sum_probs=31.6
Q ss_pred eEeccCcch---------hhhhcccccccccc--ccCchhHHHHHHhCCceeeccccc
Q 012513 328 LVVPSWSPQ---------VQVLRHGSTGGFLS--HCGWNSILESIVHGVPIIAWPLYS 374 (462)
Q Consensus 328 ~~~~~~~pq---------~~lL~~~~~~~~I~--HGG~~t~~eal~~GvP~v~~P~~~ 374 (462)
+.+-.|++. ..++..+++-++=+ -|-..+.+||+++|+|+|+.-..+
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred EEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 444577765 45788888433322 233459999999999999876554
No 66
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=70.66 E-value=45 Score=27.74 Aligned_cols=139 Identities=14% Similarity=0.147 Sum_probs=75.6
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHH---HhhCCCceEec
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVVP 331 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~ 331 (462)
+.|-|=+||-+ +.+..+++.+.|+..+..+-..+.+..+ .|+.+. +..+.++
T Consensus 23 p~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR-------------------tp~~l~~~~~~a~~~g---- 77 (181)
T 4b4k_A 23 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR-------------------TPDYMFEYAETARERG---- 77 (181)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHTTTTT----
T ss_pred ccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc-------------------ChHHHHHHHHHHHhcC----
Confidence 47888899954 5677888999999999987666665433 444332 2222222
Q ss_pred cCcchhhhhccccccccccccCch----hHHHHHHhCCceeecccccch---hhhhHHhhcccceeEEeeecCC---ccc
Q 012513 332 SWSPQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQ---KMNAVLLTDDLKVSFRVKVNEN---GLV 401 (462)
Q Consensus 332 ~~~pq~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ---~~~a~rv~~~~g~G~~~~~~~~---~~~ 401 (462)
++++|.=.|.- ++..+ ..-+|+|.+|..... .+.-.-+.+ .=.|+-+..-.- +..
T Consensus 78 -------------~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~ 142 (181)
T 4b4k_A 78 -------------LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGST 142 (181)
T ss_dssp -------------CCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHH
T ss_pred -------------ceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHH
Confidence 22444444432 33333 345799999986543 222222333 333444433220 012
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhc
Q 012513 402 GREDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 437 (462)
Q Consensus 402 ~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 437 (462)
++.-++..|..+ .| +.++++.+.+++.+++.+
T Consensus 143 NAallA~qILa~-~d---~~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 143 NAGLLAAQILGS-FH---DDIHDALELRREAIEKDV 174 (181)
T ss_dssp HHHHHHHHHHTT-TC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc-CC---HHHHHHHHHHHHHHHHHH
Confidence 233344433332 35 478888888887777643
No 67
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=69.18 E-value=40 Score=27.72 Aligned_cols=144 Identities=14% Similarity=0.148 Sum_probs=78.9
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCc
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWS 334 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 334 (462)
+.|-|-+||- .+.+..+++...|+..+..+-..+.+... .|+.+.+ |+
T Consensus 6 p~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------tp~~l~~-----------~~ 53 (166)
T 3oow_A 6 VQVGVIMGSK--SDWSTMKECCDILDNLGIGYECEVVSAHR-------------------TPDKMFD-----------YA 53 (166)
T ss_dssp EEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHH-----------HH
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcCcC-------------------CHHHHHH-----------HH
Confidence 3577778884 45677888999999999987666655433 4443321 11
Q ss_pred chhhhhccccccccccccCchhHHHHHHh---CCceeecccccchh-hh-----hHHhhcccceeEEe-eecCCcccCHH
Q 012513 335 PQVQVLRHGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQK-MN-----AVLLTDDLKVSFRV-KVNENGLVGRE 404 (462)
Q Consensus 335 pq~~lL~~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ~-~~-----a~rv~~~~g~G~~~-~~~~~~~~~~~ 404 (462)
.. +....++++|.=.|.-.-+-++.+ -+|+|.+|...... .. -.+... |+++.. ...+.+..+..
T Consensus 54 ~~---~~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa 128 (166)
T 3oow_A 54 ET---AKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAA 128 (166)
T ss_dssp HH---TTTTTCCEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHH
T ss_pred HH---HHhCCCcEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHH
Confidence 11 011112367776665443433333 58999999854321 11 112333 434322 11100124455
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCC
Q 012513 405 DIANYAKGLIQGEEGKLLRKKMRALKDAAANALSP 439 (462)
Q Consensus 405 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~ 439 (462)
-++..|..+ .| +.++++.+.+++.+++.+.+
T Consensus 129 ~lAa~Il~~-~d---~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 129 LFAASILQH-TD---INIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp HHHHHHHGG-GC---HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CC---HHHHHHHHHHHHHHHHHHHh
Confidence 555555444 45 48999999998888865543
No 68
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=67.58 E-value=28 Score=30.10 Aligned_cols=35 Identities=9% Similarity=0.195 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCC--EEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNF--LVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH--~Vt~~~~~ 49 (462)
||||+++..++ | .-+..+.++|.+. +| +|..+.+.
T Consensus 1 m~rI~vl~SG~-g--~~~~~~l~~l~~~-~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVSGR-G--SNLQAIIDAIESG-KVNASIELVISD 37 (216)
T ss_dssp CEEEEEEECSC-C--HHHHHHHHHHHTT-SSCEEEEEEEES
T ss_pred CCEEEEEEeCC-c--HHHHHHHHHHHhC-CCCCeEEEEEeC
Confidence 36898887766 3 2467778888776 77 77655543
No 69
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=66.51 E-value=27 Score=30.54 Aligned_cols=38 Identities=11% Similarity=0.069 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCC
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPT 49 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~ 49 (462)
.++|||+|+..++ |+ -+..+.+.|.+.. +|+|..+.+.
T Consensus 20 ~~~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 20 GHMIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp TTCEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEES
T ss_pred CCCcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcC
Confidence 3467999998777 33 3677778886542 4787666654
No 70
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=62.08 E-value=55 Score=28.26 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=69.9
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- +|+.+.+..+.+-+-+ |++ +.=.+.
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~i-------------------L~~~~l~~~~~~~iNi-----------HpS--LLP~yr 126 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRI-------------------LGPQFLSRFYGRTLNT-----------HPA--LLPAFP 126 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSC-------------------CCHHHHHHHTTTEEEE-----------ESS--CTTSSC
T ss_pred HHHHHHHHhhCCCEEEEcCchhh-------------------CCHHHHhhccCCeEEe-----------Ccc--cccCCC
Confidence 45788888888888888876543 7887776655433222 444 344456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|.+.+..|+.+|+...++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 127 G~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~~ 195 (215)
T 3da8_A 127 GTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQ-Q--PVPVLDG----DDEETLHERIKVTER----RLLVAAVAALA 195 (215)
T ss_dssp STTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EeecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999988877543 22222222222 1 1122222 477888887766532 24555555544
No 71
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=61.82 E-value=61 Score=26.44 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=72.8
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcc
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSP 335 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p 335 (462)
.|-|-+||- .+.+..+++...|+..+.++-..+.+... .|+.+.+ |+.
T Consensus 4 ~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~~~~-----------~~~ 51 (159)
T 3rg8_A 4 LVIILMGSS--SDMGHAEKIASELKTFGIEYAIRIGSAHK-------------------TAEHVVS-----------MLK 51 (159)
T ss_dssp EEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHH-----------HHH
T ss_pred eEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHH-----------HHH
Confidence 566667874 35677888999999999987666655433 4443321 111
Q ss_pred hhhhhccccccccccccCchhHHHHHH---hCCceeecccccchh-hhh-HHhhc-ccceeEEeeecCCcccCHHHHHHH
Q 012513 336 QVQVLRHGSTGGFLSHCGWNSILESIV---HGVPIIAWPLYSEQK-MNA-VLLTD-DLKVSFRVKVNENGLVGREDIANY 409 (462)
Q Consensus 336 q~~lL~~~~~~~~I~HGG~~t~~eal~---~GvP~v~~P~~~DQ~-~~a-~rv~~-~~g~G~~~~~~~~~~~~~~~l~~a 409 (462)
... .+-..+++|.=.|.-.-+-++. .-+|+|.+|...-.. ... .-+.+ =.|+.+. .- ++..++.-++..
T Consensus 52 ~a~--~~~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVa--tv-~~~~nAa~lA~~ 126 (159)
T 3rg8_A 52 EYE--ALDRPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLRMPSGISPA--LV-LEPKNAALLAAR 126 (159)
T ss_dssp HHH--TSCSCEEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCE--EC-CSHHHHHHHHHH
T ss_pred Hhh--hcCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHHhCCCCCceE--Ee-cCchHHHHHHHH
Confidence 100 0001235666655443333332 458999999654211 111 11111 0133321 11 122555555555
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHHHh
Q 012513 410 AKGLIQGEEGKLLRKKMRALKDAAAN 435 (462)
Q Consensus 410 i~~vl~~~~~~~~r~~a~~l~~~~~~ 435 (462)
|..+ .| +.++++.+.+++.+++
T Consensus 127 Il~~-~d---~~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 127 IFSL-YD---KEIADSVKSYMESNAQ 148 (159)
T ss_dssp HHTT-TC---HHHHHHHHHHHHHHHH
T ss_pred HHhC-CC---HHHHHHHHHHHHHHHH
Confidence 5444 35 3788888888877765
No 72
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=60.89 E-value=57 Score=27.16 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=29.7
Q ss_pred EeccCcch-hhhhccccccccccccCchhHHH---HHHhCCceeecccc
Q 012513 329 VVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILE---SIVHGVPIIAWPLY 373 (462)
Q Consensus 329 ~~~~~~pq-~~lL~~~~~~~~I~HGG~~t~~e---al~~GvP~v~~P~~ 373 (462)
++.+..++ ..++..-+-..++--||.||+.| ++.+++|++++|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34455554 44444333346677789998655 56799999999984
No 73
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=59.42 E-value=59 Score=28.24 Aligned_cols=155 Identities=10% Similarity=-0.039 Sum_probs=78.6
Q ss_pred cccCCCCCCeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCC
Q 012513 246 KWLDEQPSESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKG 325 (462)
Q Consensus 246 ~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 325 (462)
-|++-. .+.++.|..|.+ ....++.|...+..+.++..... +.+.+....
T Consensus 25 ifl~L~-gk~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~~~----------------------~~l~~l~~~ 74 (223)
T 3dfz_A 25 VMLDLK-GRSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPTVS----------------------AEINEWEAK 74 (223)
T ss_dssp EEECCT-TCCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSSCC----------------------HHHHHHHHT
T ss_pred cEEEcC-CCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCCCC----------------------HHHHHHHHc
Confidence 344432 345888866543 33445666677877666543321 222221122
Q ss_pred CceEeccCcchhhhhccccccccccccCchhHHHHHHh----CCceeecccccchhhhhH-----HhhcccceeEEeeec
Q 012513 326 VGLVVPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVH----GVPIIAWPLYSEQKMNAV-----LLTDDLKVSFRVKVN 396 (462)
Q Consensus 326 ~~~~~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~----GvP~v~~P~~~DQ~~~a~-----rv~~~~g~G~~~~~~ 396 (462)
.++......-+..-|..++ ++|.--|--.+.+.++. |+|+-+ .|.|..+. .+.+ -++-+.+.+.
T Consensus 75 ~~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~r-g~l~iaIST~ 147 (223)
T 3dfz_A 75 GQLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSR-GRLSLAISTD 147 (223)
T ss_dssp TSCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE-TTEEEEEECT
T ss_pred CCcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEe-CCEEEEEECC
Confidence 2232222222344566677 77777776666665554 555433 35444332 2333 2444444443
Q ss_pred CCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcC
Q 012513 397 ENGLVGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANALS 438 (462)
Q Consensus 397 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~ 438 (462)
.....-+..|++.|...+.. +-..+-+.+.++++.+++...
T Consensus 148 G~sP~la~~iR~~ie~~lp~-~~~~~~~~~~~~R~~vk~~~~ 188 (223)
T 3dfz_A 148 GASPLLTKRIKEDLSSNYDE-SYTQYTQFLYECRVLIHRLNV 188 (223)
T ss_dssp TSCHHHHHHHHHHHHHHSCT-HHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCcHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHHCC
Confidence 32233356788888877743 334677788888888886433
No 74
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=59.12 E-value=35 Score=28.13 Aligned_cols=143 Identities=17% Similarity=0.155 Sum_probs=77.3
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHH---hhCCCceEec
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVVP 331 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~~~~ 331 (462)
|.|-|-+||- .+.+..+++...|+..+.++-..+.+..+ .|+.+.+ ...++
T Consensus 12 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~~----- 65 (170)
T 1xmp_A 12 SLVGVIMGST--SDWETMKYACDILDELNIPYEKKVVSAHR-------------------TPDYMFEYAETARER----- 65 (170)
T ss_dssp CSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHTTTT-----
T ss_pred CcEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEeccC-------------------CHHHHHHHHHHHHhC-----
Confidence 4677778884 46677888999999999987666665433 4443321 11111
Q ss_pred cCcchhhhhccccccccccccCchhHHHHHHh---CCceeecccccch-hhhhHHhhc-c--cceeEE-eeecCCcccCH
Q 012513 332 SWSPQVQVLRHGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQ-KMNAVLLTD-D--LKVSFR-VKVNENGLVGR 403 (462)
Q Consensus 332 ~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ-~~~a~rv~~-~--~g~G~~-~~~~~~~~~~~ 403 (462)
.++++|.=.|.-.-+-++.+ -+|+|.+|..... ......+.- . .|+.+. +...+-+..+.
T Consensus 66 ------------g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nA 133 (170)
T 1xmp_A 66 ------------GLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNA 133 (170)
T ss_dssp ------------TCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHH
T ss_pred ------------CCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHH
Confidence 12256665554433333333 5899999986531 111111111 0 133321 11110012455
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCC
Q 012513 404 EDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSP 439 (462)
Q Consensus 404 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~ 439 (462)
.-++..|.. +.| +.++++.+.+++.+++.+.+
T Consensus 134 allAaqIla-~~d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 134 GLLAAQILG-SFH---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHH-TTC---HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHc-cCC---HHHHHHHHHHHHHHHHHHHh
Confidence 556655553 346 48999999988888875443
No 75
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=58.81 E-value=33 Score=31.21 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=69.2
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- ||+.+.++.+.+-+=+ |++ +.=...
T Consensus 155 ~~~~~~l~~~~~Dlivlagym~i-------------------l~~~~l~~~~~~~iNi-----------HpS--lLP~~r 202 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYMQI-------------------LSDDLSAFLSGRCINI-----------HHS--FLPGFK 202 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHHTTSEEEE-----------ESS--CTTTTC
T ss_pred HHHHHHHHHhCCCEEEhhhhhhh-------------------cCHHHHhhccCCeEEE-----------Ccc--cccCCC
Confidence 45788888888888887765433 7888877766443323 444 444567
Q ss_pred CchhHHHHHHhCCceeeccccc-c-hhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS-E-QKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 429 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~-D-Q~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l 429 (462)
|.+....|+.+|+...++-.+. | ..+-+.-+.+ .-+.+... -|.++|.+.+.++-. .-|.+..+.+
T Consensus 203 G~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~~~----dt~~~L~~r~~~~e~----~~l~~av~~~ 270 (287)
T 3nrb_A 203 GAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQ---DVEHVSHR----DSAEDLVRKGRDIER----RVLSRAVLLF 270 (287)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999998887543 2 2222222222 01122222 478888888776643 2454444443
No 76
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=57.61 E-value=52 Score=28.42 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=69.2
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- +|+.+.+..+.+-+-+ |++ +.=.+.
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~I-------------------L~~~~l~~~~~~~iNi-----------HpS--LLP~yr 119 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMSI-------------------LPEKFVTDWHHKIINI-----------HPS--LLPSFK 119 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------ESS--CTTTTC
T ss_pred HHHHHHHHHhCCCEEEEeCCceE-------------------eCHHHHhhccCCeEEE-----------Ccc--cccCCC
Confidence 45777777788888887766433 7777776655332222 455 444566
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|...+..|+.+|+...++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 120 G~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~e~----~ll~~~l~~~~ 188 (215)
T 3kcq_A 120 GLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQ-A--AVPVLRE----DTAESLASRILAAEH----VCYPKGVKLIA 188 (215)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EeecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999988877543 22333333333 1 1222222 477888887766532 24555544443
No 77
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=57.57 E-value=29 Score=30.06 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=24.4
Q ss_pred CCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhc-CCCEEEEEeCC
Q 012513 7 KQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQ-HNFLVSIFIPT 49 (462)
Q Consensus 7 ~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r-~GH~Vt~~~~~ 49 (462)
+|.+++||+++..++ ||. +.+|.+++.+. .+++|..+.+.
T Consensus 4 ~~~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~ 44 (215)
T 3kcq_A 4 SMKKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISN 44 (215)
T ss_dssp ---CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEES
T ss_pred CCCCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeC
Confidence 456778998887776 443 56677777433 12788877663
No 78
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=56.57 E-value=17 Score=31.91 Aligned_cols=41 Identities=24% Similarity=0.253 Sum_probs=36.5
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
..+++|++..-|+.|-..-++.+|.+|+++ |++|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 346889999999999999999999999988 99999888754
No 79
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=56.44 E-value=38 Score=31.68 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=32.5
Q ss_pred CcEEEEEcC-CCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 11 RAHVAMVPT-PGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 11 ~~~ill~~~-p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
+++|++++. ++.|--.-...||..|+++ |++|.++....
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~ 64 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEK-GLKVVIVSTDP 64 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHS-SCCEEEEECCT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 455655554 7999999999999999988 99999999765
No 80
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=56.36 E-value=36 Score=30.97 Aligned_cols=115 Identities=11% Similarity=0.109 Sum_probs=69.5
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- ||+.+.++.+.+-+-+ |++ +.=...
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--lLP~~r 203 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYMQI-------------------LSDEMSARLAGRCINI-----------HHS--FLPGFK 203 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------EEE--CSSCCC
T ss_pred HHHHHHHHhcCCCEEEhhhhhhh-------------------CCHHHHhhhcCCeEEe-----------Ccc--cccCCC
Confidence 45788888888888877765433 7888876665443222 444 344456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|.+....|+.+|+...++-++. +..+-+.-+.+ .-+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 204 G~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q---~~v~i~~~----dt~~~L~~r~~~~e~----~~l~~av~~~~ 272 (288)
T 3obi_A 204 GAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQ---DVERISHR----DTPADLVRKGRDIER----RVLSRALHYHL 272 (288)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999998887543 22322222222 11222222 478888888776643 24444444433
No 81
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=56.33 E-value=79 Score=27.09 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=67.8
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+.... +|+.+.+..+.+.+-+ |++ +.=...
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yr 116 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFMRI-------------------LSGPFVQKWNGKMLNI-----------HPS--LLPSFK 116 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCCSC-------------------CCHHHHHHTTTSEEEE-----------ESS--STTSSC
T ss_pred HHHHHHHHhcCCCEEEEcchhhh-------------------CCHHHHhhhcCCEEEE-----------ccC--cCcCCC
Confidence 45778888888888888776433 7777776554333222 444 444466
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|.+.+..|+.+|....++-+.. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 117 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~~ 185 (209)
T 1meo_A 117 GSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQ-E--AVPVKRG----DTVATLSERVKLAEH----KIFPAALQLVA 185 (209)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEEE-E--EEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999988777543 33333333322 1 1122222 477788777766532 24555554443
No 82
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=56.16 E-value=59 Score=27.96 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~ 49 (462)
||||+++..++ |+ -+.++.++|.+.. +|+|..+.+.
T Consensus 3 m~ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeC
Confidence 46888888877 43 3666777886542 5888766654
No 83
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=56.07 E-value=64 Score=29.51 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccc
Q 012513 270 EQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFL 349 (462)
Q Consensus 270 ~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I 349 (462)
+.-.++++.++..+..+++..+...- ||+.+.++.+.+-+=+ |++ +.=
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagym~I-------------------L~~~~l~~~~~~~INi-----------HpS--lLP 215 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARYMQI-------------------LPPQLCREYAHQVINI-----------HHS--FLP 215 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCCSC-------------------CCTTHHHHTTTCEEEE-----------ESS--CTT
T ss_pred HHHHHHHHHHHHhCCCEEEHhHhhhh-------------------cCHHHHhhhhCCeEEe-----------Ccc--ccc
Confidence 33445788888888888877765433 7777776665433222 444 444
Q ss_pred cccCchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHH
Q 012513 350 SHCGWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMR 427 (462)
Q Consensus 350 ~HGG~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~ 427 (462)
...|.+....|+.+|+...++-+.. +..+-+.-+.+ .-+.+... -|.++|.+.+.++-. .-|.+..+
T Consensus 216 ~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~~~----dt~~~L~~r~~~~e~----~~l~~av~ 284 (302)
T 3o1l_A 216 SFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQ---DVVRVSHR----DSIENMVRFGRDVEK----MVLARGLR 284 (302)
T ss_dssp SSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHH
T ss_pred CCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEE---EEEecCCC----CCHHHHHHHHHHHHH----HHHHHHHH
Confidence 4679999999999999998887543 22222222222 11122222 478888887776643 24444444
Q ss_pred HH
Q 012513 428 AL 429 (462)
Q Consensus 428 ~l 429 (462)
.+
T Consensus 285 ~~ 286 (302)
T 3o1l_A 285 AH 286 (302)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 84
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.03 E-value=54 Score=28.29 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=69.1
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- +|+.+.+..+.+-+-+ |++ +.=.+.
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yr 120 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFMRK-------------------LGKAFVSHYSGRMINI-----------HPS--LLPKYT 120 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------ESS--STTTTC
T ss_pred HHHHHHHHhcCCCEEEEccchhh-------------------CCHHHHhhccCCeEEe-----------Ccc--cCCCCC
Confidence 45888888888888888776433 7787776655432222 444 444456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|...+..|+.+|....++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 121 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~~ 189 (215)
T 3tqr_A 121 GLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQ-A--RLSITPQ----DTPETLKTRVHALEH----IIYPEVLSWFA 189 (215)
T ss_dssp SSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred ChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999998877543 22333332222 1 1122222 477888887766532 24555444443
No 85
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=54.94 E-value=44 Score=28.73 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=68.6
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+.... +|+.+.+..+.+-+-+ |++ +.=.+.
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yr 123 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMRL-------------------LSGRFIAPYEGRILNI-----------HPS--LLPLFP 123 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSC-------------------CCHHHHGGGTTCEEEE-----------ESS--CTTSSC
T ss_pred HHHHHHHHhcCCCEEEEeccccC-------------------cCHHHHhhccCCeEEE-----------CCc--cccCCC
Confidence 45788888888888888776433 7777765554332222 555 455567
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|...+..|+.+|....++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 124 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~r~~~~~~----~ll~~~l~~~~ 192 (209)
T 4ds3_A 124 GLHTHQRALDAGMKLAGCTVHLVTEGMDEGPILAQ-A--AVPVLDG----DTAETLAARVLKAEH----RLYPLALQKFA 192 (209)
T ss_dssp SSCHHHHHHHTTCSEEEEEEEECCC--CCCCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred ChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCeEEE-E--EEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999988777543 22332222222 1 1122222 477788877766532 24555544443
No 86
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=54.69 E-value=39 Score=30.75 Aligned_cols=115 Identities=16% Similarity=0.129 Sum_probs=69.0
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- ||+.+.++.+.+-+-+ |++ +.=...
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--lLP~~r 208 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYMQV-------------------LSPEASARLANRAINI-----------HHS--FLPGFK 208 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------EEE--CSSCCC
T ss_pred HHHHHHHHHhCCCEEEecCchhh-------------------CCHHHHhhhcCCeEEe-----------CCC--cCcCCC
Confidence 35777888878887777765433 7888877665443322 444 444566
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|.+....|+.+|+...++-.+. +..+.+.-+.+ .-+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 209 G~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q---~~v~i~~~----dt~~~L~~r~~~~e~----~~l~~av~~~~ 277 (292)
T 3lou_A 209 GAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQ---VVERVDHS----YRPEQLLAVGRDVEC----ITLARAVKAFI 277 (292)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEE---EEEEcCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999998887543 22222222222 11122222 478888888776643 24444444433
No 87
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=54.39 E-value=43 Score=30.36 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=69.0
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- ||+.+.++.+.+-+-+ |++ +.=...
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--lLP~~r 203 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYMQV-------------------LSPELCRRLDGWAINI-----------HHS--LLPGFK 203 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------EEC--SSTTCC
T ss_pred HHHHHHHHhcCCCEEEecccccc-------------------cCHHHHhhhcCCeEEe-----------ccc--cccCCC
Confidence 35778888888887877765433 7888877665443322 444 344466
Q ss_pred CchhHHHHHHhCCceeeccccc-c-hhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS-E-QKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~-D-Q~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|.+....|+.+|+...++-++. | ..+.+.-+.+ .-+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 204 G~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q---~~~~i~~~----dt~~~L~~r~~~~e~----~~l~~av~~~~ 272 (286)
T 3n0v_A 204 GAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQ---GVEVVDHS----HYPEDLIAKGRDIEC----LTLARAVGYHI 272 (286)
T ss_dssp CSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE---EEEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEE---EEEEcCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999998887543 2 2222222222 01122222 478888888776643 24544444443
No 88
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=54.33 E-value=7 Score=35.39 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=39.0
Q ss_pred cccccccccccCchhHHHHHHh------CCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhc
Q 012513 342 HGSTGGFLSHCGWNSILESIVH------GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQ 415 (462)
Q Consensus 342 ~~~~~~~I~HGG~~t~~eal~~------GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~ 415 (462)
.++ ++|.=||=||++++... ++|++.+|... +|.. .+ +.++++.++++++++
T Consensus 35 ~~D--~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~--------------lgfl---~~---~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPE--IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH--------------LGFY---AD---WRPAEADKLVKLLAK 92 (272)
T ss_dssp SCS--EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS--------------CCSS---CC---BCGGGHHHHHHHHHT
T ss_pred CCC--EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC--------------CCcC---Cc---CCHHHHHHHHHHHHc
Confidence 345 89999999999999775 88999988531 1211 12 567788888888887
Q ss_pred C
Q 012513 416 G 416 (462)
Q Consensus 416 ~ 416 (462)
+
T Consensus 93 g 93 (272)
T 2i2c_A 93 G 93 (272)
T ss_dssp T
T ss_pred C
Confidence 5
No 89
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=53.83 E-value=13 Score=33.79 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=23.7
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
|||++. ++.|.+= ..|+++|.++ ||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEEC
Confidence 676543 4447665 4688999998 999999874
No 90
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=53.80 E-value=26 Score=33.21 Aligned_cols=37 Identities=19% Similarity=-0.024 Sum_probs=30.8
Q ss_pred CcEEEEEcC-CCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPT-PGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~-p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
||+|++++. ++.|--.-...||..|+++ |++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 356776665 6888889999999999987 999999987
No 91
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=53.04 E-value=63 Score=28.16 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=68.7
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+.... ||+.+.+..+.+.+-+ |++ +.=...
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~~I-------------------L~~~~l~~~~~~~iNi-----------HpS--LLP~yr 138 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYMRL-------------------VRGPMLTAFPNRILNI-----------HPS--LLPAFP 138 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC-------------------CCHHHHHHSTTCEEEE-----------ESS--CTTSSC
T ss_pred HHHHHHHHhcCCCEEEEcChhHh-------------------CCHHHHhhccCCEEEE-----------ccC--cCcCCC
Confidence 34778888888888887776433 7787776654333222 444 444456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 429 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l 429 (462)
|...+..|+.+|....++-+.. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+
T Consensus 139 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~l 206 (229)
T 3auf_A 139 GLEAQRQALEHGVKVAGCTVHFVTAGVDEGPIILQ-A--AVPVLEG----DTVEDLRRRILAEEH----RIYPEAIRLF 206 (229)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CcCHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE-E--EEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999988877543 33333333333 1 1122222 477788877766532 2455444444
No 92
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=52.58 E-value=84 Score=28.01 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=31.1
Q ss_pred CcEEEEEcC--CCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 11 RAHVAMVPT--PGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 11 ~~~ill~~~--p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
++++++++. |+.|=-.-...||..|+++ |.+|.++-...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~-G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQA-GYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 455666654 6888889999999999987 99999987653
No 93
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=51.73 E-value=9.4 Score=34.91 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=26.7
Q ss_pred CccccCCCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 1 METQNSKQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 1 m~~~~~~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|....++|..+|+|.++-.+..|. .+|+.|+++ ||+|+++...
T Consensus 5 ~~~~~~~M~~~~~I~vIG~G~mG~-----~~A~~l~~~-G~~V~~~dr~ 47 (296)
T 3qha_A 5 MTTNAAHTTEQLKLGYIGLGNMGA-----PMATRMTEW-PGGVTVYDIR 47 (296)
T ss_dssp ----------CCCEEEECCSTTHH-----HHHHHHTTS-TTCEEEECSS
T ss_pred cCCCcccccCCCeEEEECcCHHHH-----HHHHHHHHC-CCeEEEEeCC
Confidence 344455555567999998777764 688999887 9999988643
No 94
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=51.24 E-value=81 Score=27.05 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=69.5
Q ss_pred HHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccC
Q 012513 274 ELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCG 353 (462)
Q Consensus 274 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG 353 (462)
++++.++..+..+++..+...- +|+.+.+..+.+.+-+ |++ +.=.+.|
T Consensus 73 ~~~~~l~~~~~Dliv~a~y~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yrG 120 (212)
T 3av3_A 73 EILRELKGRQIDWIALAGYMRL-------------------IGPTLLSAYEGKIVNI-----------HPS--LLPAFPG 120 (212)
T ss_dssp HHHHHHHHTTCCEEEESSCCSC-------------------CCHHHHHHTTTCEEEE-----------ESS--CTTSSCS
T ss_pred HHHHHHHhcCCCEEEEchhhhh-------------------CCHHHHhhhcCCEEEE-----------ecC--cCCCCCC
Confidence 5788888888888887765433 7887776655433322 555 4455679
Q ss_pred chhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 354 WNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 354 ~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
.+.+..|+.+|....++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 121 ~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~r~~~~~~----~ll~~~l~~~~ 188 (212)
T 3av3_A 121 KDAIGQAYRAGVSETGVTVHYVDEGMDTGPVIAQ-R--VVPIVPG----EPIEALEERIHQVEH----ELYPTVLRMLL 188 (212)
T ss_dssp TTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred cCHHHHHHHcCCCeEEEEEEEECCCCCCCCEEEE-E--EEecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999999999999988877543 22332222222 1 1122222 477888877766532 24555555543
No 95
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=50.94 E-value=1e+02 Score=25.23 Aligned_cols=141 Identities=16% Similarity=0.168 Sum_probs=75.1
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcc
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSP 335 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p 335 (462)
.|-|-+||- .+.+..+++...|+..+.++-..+.+... .|+.+.+- +-
T Consensus 5 ~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------~p~~~~~~-----------~~ 52 (163)
T 3ors_A 5 KVAVIMGSS--SDWKIMQESCNMLDYFEIPYEKQVVSAHR-------------------TPKMMVQF-----------AS 52 (163)
T ss_dssp CEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHH-----------HH
T ss_pred eEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEECCcC-------------------CHHHHHHH-----------HH
Confidence 566667874 45677888999999999987666655433 44433211 00
Q ss_pred hhhhhccccccccccccCch----hHHHHHHhCCceeecccccchh-hhhHHh--hc-ccceeEEe-eecCCcccCHHHH
Q 012513 336 QVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQK-MNAVLL--TD-DLKVSFRV-KVNENGLVGREDI 406 (462)
Q Consensus 336 q~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ~-~~a~rv--~~-~~g~G~~~-~~~~~~~~~~~~l 406 (462)
. .....++++|.=.|.- ++..++ .-+|+|.+|...... .....+ .+ =-|+.+.. ...+.+..+..-+
T Consensus 53 ~---a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~l 128 (163)
T 3ors_A 53 E---ARERGINIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGIL 128 (163)
T ss_dssp H---TTTTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHH
T ss_pred H---HHhCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHH
Confidence 0 0111122566655543 444443 558999999765421 111111 11 02432221 1110012455556
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 012513 407 ANYAKGLIQGEEGKLLRKKMRALKDAAANA 436 (462)
Q Consensus 407 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~ 436 (462)
+..|..+ .|+ .++++.+.+++.+++.
T Consensus 129 Aa~Il~~-~d~---~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 129 AARMLSI-QNP---SLVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHT-TCT---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCH---HHHHHHHHHHHHHHHH
Confidence 6555555 353 8888888888888754
No 96
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.89 E-value=22 Score=28.08 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=27.2
Q ss_pred cEEEEEcC-C--CcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPT-P--GMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~-p--~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++++++.. + +......-+.+|...++. ||+|+++...
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~ 55 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMI 55 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEe
Confidence 45554444 4 456777888999988887 9999988865
No 97
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=50.74 E-value=21 Score=28.32 Aligned_cols=38 Identities=11% Similarity=0.005 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+.+|++.+.++-+|-....-++..|..+ |++|..+...
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 3589999999999999999999999887 9999988763
No 98
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=50.44 E-value=72 Score=27.39 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=68.7
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- +|+.+.+..+.+.+-+ |++ +.=.+.
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--lLP~yr 116 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFMRI-------------------LSPAFVSHYAGRLLNI-----------HPS--LLPKYP 116 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCCSC-------------------CCHHHHHHTTTSEEEE-----------ESS--CTTSCC
T ss_pred HHHHHHHHhcCCCEEEEeChhhh-------------------CCHHHHhhccCCEEEE-----------ccC--cccCCC
Confidence 45788888888888887776433 7777776655433322 444 444456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRAL 429 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l 429 (462)
|...+..|+.+|....++-++. +..+.+.-+.+ .- +.+... -|.++|.+.+.++-. .-|.+..+.+
T Consensus 117 G~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~~--v~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~ 184 (212)
T 1jkx_A 117 GLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQ-AK--VPVFAG----DSEDDITARVQTQEH----AIYPLVISWF 184 (212)
T ss_dssp SSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE-EE--EECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CccHHHHHHHcCCCceEEEEEEEcccccCCCEEEE-EE--EEcCCC----CCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999999999999988877543 23333332222 11 122222 477888877766532 2455554444
No 99
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=50.39 E-value=80 Score=27.11 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=63.8
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+.... +|+.+.+..+.+.+-+ |++ +.=...
T Consensus 71 ~~~~~~l~~~~~Dliv~agy~~I-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yr 118 (211)
T 3p9x_A 71 IEVVQQLKEKQIDFVVLAGYMRL-------------------VGPTLLGAYEGRIVNI-----------HPS--LLPAFP 118 (211)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSC-------------------CCHHHHHHHTTSEEEE-----------ESS--CTTSSC
T ss_pred HHHHHHHHhcCCCEEEEeCchhh-------------------cCHHHHhhccCCeEEE-----------CCc--cCCCCC
Confidence 45888888888888888776433 7887776665443322 444 444556
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGL 413 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~v 413 (462)
|...+..|+.+|....++-+.. +..+.+.-+.+ . -+.+... -|.++|.+.+.++
T Consensus 119 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 119 GLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQ-E--AVSIEEE----DTLETLTTKIQAV 174 (211)
T ss_dssp SSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EEecCCC----CCHHHHHHHHHHH
Confidence 9999999999999988777543 22332332222 1 1122222 4777777777665
No 100
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=50.21 E-value=9.1 Score=34.32 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=39.5
Q ss_pred cccccccccccCchhHHHHHHh---CCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcC
Q 012513 342 HGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 416 (462)
Q Consensus 342 ~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~ 416 (462)
.++ ++|+=||=||+++++.. ++|++.++... + |..- + +.++++.++++.++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~G~------------~--Gfl~---~---~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKAGR------------L--GFLT---S---YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEESSS------------C--CSSC---C---BCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEECCC------------C--CccC---c---CCHHHHHHHHHHHHcC
Confidence 456 89999999999999877 88888887321 1 2111 1 5678899999998876
No 101
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=50.08 E-value=18 Score=30.18 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=32.4
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
+||++.-.++.|=+. ...|.+.|+++ |++|.++.++....
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTNGRK 45 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTGGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcCHHH
Confidence 588888888866554 88999999887 99999999875443
No 102
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=49.00 E-value=34 Score=25.60 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=29.4
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSP 293 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~ 293 (462)
-|||-|.| +|+.+++|++.+++-+.+++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 67888866 89999999999999999998888754
No 103
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=48.73 E-value=1.2e+02 Score=25.34 Aligned_cols=138 Identities=15% Similarity=0.218 Sum_probs=75.6
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHH---hhCCCceEec
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLD---RTKGVGLVVP 331 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~~~~ 331 (462)
|.|-|-+||- .+.+..+++...|+..+.++-..+.+... .|+.+.+ ...++
T Consensus 14 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~~----- 67 (183)
T 1o4v_A 14 PRVGIIMGSD--SDLPVMKQAAEILEEFGIDYEITIVSAHR-------------------TPDRMFEYAKNAEER----- 67 (183)
T ss_dssp CEEEEEESCG--GGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHHHHHHHTTTT-----
T ss_pred CeEEEEeccH--HHHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHHHHHHHHHhC-----
Confidence 4777778884 46677888999999999987666665433 4443321 11111
Q ss_pred cCcchhhhhccccccccccccCch----hHHHHHHhCCceeecccccch--hhhhH-Hhhccc--ceeEEeeecCCcccC
Q 012513 332 SWSPQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQ--KMNAV-LLTDDL--KVSFRVKVNENGLVG 402 (462)
Q Consensus 332 ~~~pq~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ--~~~a~-rv~~~~--g~G~~~~~~~~~~~~ 402 (462)
.++++|.=.|.- ++..++ .-+|+|.+|..... ...+. -+.+ . |+.+..-.- ++..+
T Consensus 68 ------------g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I-d~~~n 132 (183)
T 1o4v_A 68 ------------GIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI-NNAKN 132 (183)
T ss_dssp ------------TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT-TCHHH
T ss_pred ------------CCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec-CCchH
Confidence 122455554433 444444 56899999975521 11111 1223 3 433221100 11245
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhc
Q 012513 403 REDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 437 (462)
Q Consensus 403 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 437 (462)
+.-++..|..+ .| +.++++.+.++..+++.+
T Consensus 133 Aa~lAaqIla~-~d---~~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 133 AGILAASILGI-KY---PEIARKVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHHT-TC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CC---HHHHHHHHHHHHHHHHHH
Confidence 66666666533 45 378888777777776643
No 104
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=48.63 E-value=25 Score=31.36 Aligned_cols=39 Identities=15% Similarity=0.019 Sum_probs=35.4
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.+.+|++.+.++-.|-....-++..|..+ |++|.++...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 36789999999999999999999999887 9999998865
No 105
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=47.97 E-value=21 Score=30.64 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=34.9
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.+.+|++.+.++-.|-....-++..|..+ |++|.++...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 35689999999999999999999999887 9999998864
No 106
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=47.85 E-value=85 Score=25.96 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=76.1
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCc
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWS 334 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 334 (462)
+.|-|-+||- .+.+..+++...|+..+.++-..+.+... .|+.+.+ |+
T Consensus 8 ~~V~IimgS~--SD~~v~~~a~~~L~~~gi~~ev~V~SaHR-------------------~p~~~~~-----------~~ 55 (174)
T 3lp6_A 8 PRVGVIMGSD--SDWPVMADAAAALAEFDIPAEVRVVSAHR-------------------TPEAMFS-----------YA 55 (174)
T ss_dssp CSEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHH-----------HH
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEECCCC-------------------CHHHHHH-----------HH
Confidence 3566667884 35677888999999999987666655433 4443221 11
Q ss_pred chhhhhccccccccccccCch----hHHHHHHhCCceeecccccchh-hhhHH--hhc-ccceeEEeeecCCcccCHHHH
Q 012513 335 PQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQK-MNAVL--LTD-DLKVSFRVKVNENGLVGREDI 406 (462)
Q Consensus 335 pq~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ~-~~a~r--v~~-~~g~G~~~~~~~~~~~~~~~l 406 (462)
-. .....++++|.=.|.- ++..++ .-+|+|.+|...-.. ..... +.+ =.|+.+..-.- ++..++.-+
T Consensus 56 ~~---a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I-~~~~nAa~l 130 (174)
T 3lp6_A 56 RG---AAARGLEVIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI-GGAGNAGLL 130 (174)
T ss_dssp HH---HHHHTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT-TCHHHHHHH
T ss_pred HH---HHhCCCCEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc-CcchHHHHH
Confidence 00 0011222566655544 344443 458999999764321 11111 111 02432221110 012455566
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 012513 407 ANYAKGLIQGEEGKLLRKKMRALKDAAANA 436 (462)
Q Consensus 407 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~ 436 (462)
+..|..+ .| +.++++.+.+++.+++.
T Consensus 131 Aa~Il~~-~d---~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 131 AVRMLGA-AN---PQLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHT-TC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CC---HHHHHHHHHHHHHHHHH
Confidence 6666554 45 48888888888888764
No 107
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=47.67 E-value=17 Score=29.82 Aligned_cols=39 Identities=21% Similarity=0.022 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++.+|++.+.++-.|-....-++..|..+ |++|.++...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 46789999999999999999999999887 9999987653
No 108
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=47.37 E-value=37 Score=34.37 Aligned_cols=27 Identities=19% Similarity=0.399 Sum_probs=22.9
Q ss_pred ccccccccC------chhHHHHHHhCCceeecc
Q 012513 345 TGGFLSHCG------WNSILESIVHGVPIIAWP 371 (462)
Q Consensus 345 ~~~~I~HGG------~~t~~eal~~GvP~v~~P 371 (462)
.+++++|.| .+.+.+|.+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 347888888 668999999999999984
No 109
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=47.23 E-value=26 Score=29.63 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=30.8
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+||++.-.++.|-+ =...|.++|.++ |++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEECh
Confidence 48999888987854 578999999887 9999999876
No 110
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=46.71 E-value=17 Score=29.26 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=27.6
Q ss_pred CcEEEEEcC-C-CcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPT-P-GMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~-p-~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.|+++++-. | ..-.+--.+-++..|..+ ||+|++++++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~np 45 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANP 45 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCH
Confidence 345555433 3 445555578899999998 9999999987
No 111
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=46.42 E-value=82 Score=26.24 Aligned_cols=143 Identities=12% Similarity=0.134 Sum_probs=79.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHH---HhhCCCceEecc
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVVPS 332 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~ 332 (462)
.|-|-+||- .+.+..+++...|+..+.++-..+.+..+ .|+.+. +....+
T Consensus 23 ~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~~~~~~a~~~------ 75 (182)
T 1u11_A 23 VVGIIMGSQ--SDWETMRHADALLTELEIPHETLIVSAHR-------------------TPDRLADYARTAAER------ 75 (182)
T ss_dssp SEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHHHTTTT------
T ss_pred EEEEEECcH--HHHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHHHHHHHHHhC------
Confidence 566667884 46677888999999999987666665433 444322 111111
Q ss_pred CcchhhhhccccccccccccCch----hHHHHHHhCCceeecccccch--hhhhH--HhhcccceeEE-eeecCCcccCH
Q 012513 333 WSPQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQ--KMNAV--LLTDDLKVSFR-VKVNENGLVGR 403 (462)
Q Consensus 333 ~~pq~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ--~~~a~--rv~~~~g~G~~-~~~~~~~~~~~ 403 (462)
.++++|.=.|.- ++..++ .-+|+|.+|..... ...+. .++-=.|+.+. +...+-+..+.
T Consensus 76 -----------g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nA 143 (182)
T 1u11_A 76 -----------GLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNA 143 (182)
T ss_dssp -----------TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHH
T ss_pred -----------CCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHH
Confidence 122455555533 444444 36899999986531 11111 12200234321 11110012455
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCC
Q 012513 404 EDIANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDG 441 (462)
Q Consensus 404 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g 441 (462)
.-++..|.. +.| +.++++.+.+++.+++.+.+..
T Consensus 144 allAaqIla-~~d---~~l~~kL~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 144 ALLAASILA-LYN---PALAARLETWRALQTASVPNSP 177 (182)
T ss_dssp HHHHHHHHG-GGC---HHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHc-cCC---HHHHHHHHHHHHHHHHHHHHhh
Confidence 556655543 346 4899999999999888766543
No 112
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=45.68 E-value=33 Score=30.60 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
++||||+.==.+. |.-=+..|++.| +. +|+|+++.|...+.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l-~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTL-AD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHH-TT-TSEEEEEEESSCCT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHH-Hh-cCCEEEEecCCCCc
Confidence 4689876655554 555688999999 45 89999999987765
No 113
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=44.74 E-value=84 Score=27.03 Aligned_cols=115 Identities=16% Similarity=0.148 Sum_probs=66.6
Q ss_pred HHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhcccccccccccc
Q 012513 273 NELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHC 352 (462)
Q Consensus 273 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HG 352 (462)
.++++.++..+..+++..+...- +|+.+.+..+.+.+-+ |++ +.=.+-
T Consensus 70 ~~~~~~l~~~~~Dliv~a~y~~i-------------------l~~~~l~~~~~~~iNi-----------HpS--LLP~yr 117 (216)
T 2ywr_A 70 ERMALELKKKGVELVVLAGFMRI-------------------LSHNFLKYFPNKVINI-----------HPS--LIPAFQ 117 (216)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSC-------------------CCHHHHTTSTTCEEEE-----------ESS--CTTTTC
T ss_pred HHHHHHHHhcCCCEEEEeCchhh-------------------CCHHHHhhccCCeEEE-----------cCC--cCcCCC
Confidence 34778888888888887765433 6776664443322222 444 344456
Q ss_pred CchhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 353 GWNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 353 G~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
|...+..|+.+|....++-++. +..+.+.-+.+ .- +.+... -|.++|.+.+.++-. .-+.+..+.+.
T Consensus 118 G~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~q-~~--~~i~~~----dt~~~L~~rl~~~~~----~ll~~~l~~~~ 186 (216)
T 2ywr_A 118 GLHAQKQAVEFGVKFSGCTVHIVDESVDAGPVIVQ-AV--VPVLPE----DDENTLADRILKWEH----KILPQTVQWFA 186 (216)
T ss_dssp STTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-EE--EECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEEcccCCCCCEEEE-EE--EEcCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9999999999999988777543 23333332222 11 122222 477788777766532 24555544443
No 114
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=44.59 E-value=1.4e+02 Score=25.43 Aligned_cols=35 Identities=9% Similarity=0.120 Sum_probs=22.6
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcC-CCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQH-NFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~-GH~Vt~~~~~ 49 (462)
|||+++..+. |+ -+.+|.+.+.+.. +|+|..+.+.
T Consensus 1 ~ri~vl~Sg~-gs--nl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLISGN-GS--NLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEESSC-CH--HHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEECC-cH--HHHHHHHHHHcCCCCceEEEEEeC
Confidence 4677777665 33 4777888885431 4888766654
No 115
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=43.77 E-value=27 Score=29.86 Aligned_cols=41 Identities=20% Similarity=0.127 Sum_probs=33.0
Q ss_pred CcEEEEEcCCCcCCHH-HHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLI-PLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~-P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
.+||++.-.++ +... =...|.++|.++ |++|.++.++....
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHTVQT 48 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSCSCC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChhHHH
Confidence 46888888888 5555 789999999887 99999999875443
No 116
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=41.99 E-value=40 Score=28.01 Aligned_cols=42 Identities=5% Similarity=-0.058 Sum_probs=26.6
Q ss_pred CCCCCCcEEEEEcC-CCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 6 SKQIPRAHVAMVPT-PGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 6 ~~~~~~~~ill~~~-p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|+|.+..+++++-. .++=.+. +..-.+.|.+. |++|+++++.
T Consensus 2 ~~m~~t~~~v~il~~~gFe~~E-~~~p~~~l~~a-g~~V~~~s~~ 44 (177)
T 4hcj_A 2 NAMGKTNNILYVMSGQNFQDEE-YFESKKIFESA-GYKTKVSSTF 44 (177)
T ss_dssp ---CCCCEEEEECCSEEECHHH-HHHHHHHHHHT-TCEEEEEESS
T ss_pred CccccCCCEEEEECCCCccHHH-HHHHHHHHHHC-CCEEEEEECC
Confidence 56777667666554 3443333 55666778777 9999999975
No 117
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=41.50 E-value=34 Score=29.11 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=30.0
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|||++.-.++.|-+. ...|.+.|.++.|++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 578888888866655 8999999965328999999876
No 118
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=41.19 E-value=97 Score=28.05 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 11 RAHVAMVPT--PGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 11 ~~~ill~~~--p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
.+++++++. |+.|=-.-...||..|+++ |.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 344555544 6888899999999999987 99999987653
No 119
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=40.69 E-value=32 Score=29.75 Aligned_cols=40 Identities=13% Similarity=-0.058 Sum_probs=34.8
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.++.+|++.+.++-.|-....-++..|..+ |++|..+...
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCC
Confidence 346799999999999999999999999887 9999998764
No 120
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=40.66 E-value=24 Score=30.31 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCcCCHHH-HHHHHHHHHhcCCCEEEEEeCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIP-LAQLAKRLVRQHNFLVSIFIPTIDD 52 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P-~l~La~~L~~r~GH~Vt~~~~~~~~ 52 (462)
.+||++.-.++ +...- ...|.+.|.++ |++|.++.++...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehHHH
Confidence 35788877777 55665 78999999887 9999999987544
No 121
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=40.40 E-value=25 Score=30.07 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++|+|++. ++.|.+- ..|++.|.++ ||+|+.++-.
T Consensus 3 ~m~~ilIt--GatG~iG--~~l~~~L~~~-g~~V~~~~r~ 37 (227)
T 3dhn_A 3 KVKKIVLI--GASGFVG--SALLNEALNR-GFEVTAVVRH 37 (227)
T ss_dssp CCCEEEEE--TCCHHHH--HHHHHHHHTT-TCEEEEECSC
T ss_pred CCCEEEEE--cCCchHH--HHHHHHHHHC-CCEEEEEEcC
Confidence 35676655 3345444 5788999887 9999988753
No 122
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=39.67 E-value=15 Score=35.01 Aligned_cols=60 Identities=18% Similarity=0.324 Sum_probs=41.0
Q ss_pred chhhhhccccccccccccCchhHHHHHHh----CC-ceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHH
Q 012513 335 PQVQVLRHGSTGGFLSHCGWNSILESIVH----GV-PIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANY 409 (462)
Q Consensus 335 pq~~lL~~~~~~~~I~HGG~~t~~eal~~----Gv-P~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~a 409 (462)
+...+-..++ ++|+=||=||++.|... ++ |++.+.... + |... + +..+++.++
T Consensus 107 ~~~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~------------l--GFLt---~---~~~~~~~~a 164 (388)
T 3afo_A 107 PEQDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALGT------------L--GFLS---P---FDFKEHKKV 164 (388)
T ss_dssp CHHHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECSS------------C--CSSC---C---EEGGGHHHH
T ss_pred chhhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECCC------------c--ccCC---c---CChHHHHHH
Confidence 3445556678 89999999999999654 57 788876431 1 2111 1 455778888
Q ss_pred HHHHhcC
Q 012513 410 AKGLIQG 416 (462)
Q Consensus 410 i~~vl~~ 416 (462)
+++++++
T Consensus 165 l~~il~g 171 (388)
T 3afo_A 165 FQEVISS 171 (388)
T ss_dssp HHHHHTT
T ss_pred HHHHhcC
Confidence 8888775
No 123
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=39.56 E-value=1.6e+02 Score=24.29 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=77.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcc
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSP 335 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p 335 (462)
.|-|-+||- .+.+..+++...|+..+.++-..+.+..+ .|+.+.+- +-
T Consensus 14 ~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR-------------------~p~~~~~~-----------~~ 61 (174)
T 3kuu_A 14 KIAIVMGSK--SDWATMQFAADVLTTLNVPFHVEVVSAHR-------------------TPDRLFSF-----------AE 61 (174)
T ss_dssp CEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHH-----------HH
T ss_pred cEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHHH-----------HH
Confidence 566667874 45677888999999999987666665433 44433211 00
Q ss_pred hhhhhccccccccccccCchhHHHHHHh---CCceeecccccchh-hhhHHh--hc-ccceeEEe-eecCCcccCHHHHH
Q 012513 336 QVQVLRHGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQK-MNAVLL--TD-DLKVSFRV-KVNENGLVGREDIA 407 (462)
Q Consensus 336 q~~lL~~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ~-~~a~rv--~~-~~g~G~~~-~~~~~~~~~~~~l~ 407 (462)
. .....++++|.=.|.-.-+-++.+ -+|+|.+|...... .....+ .+ =.|+.+.. ...+.+..+..-++
T Consensus 62 ~---a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lA 138 (174)
T 3kuu_A 62 Q---AEANGLHVIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLA 138 (174)
T ss_dssp H---TTTTTCSEEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHH
T ss_pred H---HHhCCCcEEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHH
Confidence 0 001122356666554433333333 58999999864321 112122 11 02432211 11100113455555
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHhhcCC
Q 012513 408 NYAKGLIQGEEGKLLRKKMRALKDAAANALSP 439 (462)
Q Consensus 408 ~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~ 439 (462)
..|..+ .| +.++++.+.+++.+++.+.+
T Consensus 139 a~ILa~-~d---~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 139 AQILAL-HD---TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHHT-TC---HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcC-CC---HHHHHHHHHHHHHHHHHHHh
Confidence 555444 45 48999999998888865543
No 124
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=39.37 E-value=33 Score=31.43 Aligned_cols=56 Identities=16% Similarity=0.166 Sum_probs=36.6
Q ss_pred hhccccccccccccCchhHHHHHHh----CCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHh
Q 012513 339 VLRHGSTGGFLSHCGWNSILESIVH----GVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLI 414 (462)
Q Consensus 339 lL~~~~~~~~I~HGG~~t~~eal~~----GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl 414 (462)
+...++ ++|.-||=||+++++.. ++|++.++... + |... + +.++++.++++.++
T Consensus 72 ~~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~------------~--gfl~---~---~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 72 AADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNLGR------------I--GFLA---E---AEAEAIDAVLEHVV 129 (307)
T ss_dssp ----CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEECSS------------C--CSSC---S---EEGGGHHHHHHHHH
T ss_pred cccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC------------C--ccCc---c---cCHHHHHHHHHHHH
Confidence 344567 89999999999999854 89999887431 1 1111 1 34567777777777
Q ss_pred cC
Q 012513 415 QG 416 (462)
Q Consensus 415 ~~ 416 (462)
.+
T Consensus 130 ~g 131 (307)
T 1u0t_A 130 AQ 131 (307)
T ss_dssp HT
T ss_pred cC
Confidence 65
No 125
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=39.16 E-value=55 Score=33.08 Aligned_cols=25 Identities=16% Similarity=0.391 Sum_probs=21.4
Q ss_pred ccccccCch------hHHHHHHhCCceeecc
Q 012513 347 GFLSHCGWN------SILESIVHGVPIIAWP 371 (462)
Q Consensus 347 ~~I~HGG~~------t~~eal~~GvP~v~~P 371 (462)
++++|.|-| .+.+|-+.++|+|++-
T Consensus 78 v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 78 ICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 778888854 7899999999999984
No 126
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=38.12 E-value=36 Score=29.25 Aligned_cols=39 Identities=8% Similarity=0.126 Sum_probs=32.4
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDD 52 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~ 52 (462)
++||++.-.++.+-+. ...|.++|.++ | +|.++.++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKSSL 57 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTGGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcchHH
Confidence 4689999999987766 89999999876 9 99999987433
No 127
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.04 E-value=29 Score=28.21 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
..+++++..++ | +.|++.+++.|.++ |.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~-~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEI-GNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHH-TCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 34788888776 4 99999999999887 9999998 543
No 128
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=37.96 E-value=1.9e+02 Score=25.92 Aligned_cols=25 Identities=12% Similarity=-0.009 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEEe
Q 012513 267 LSQEQLNELALGLEMSGQRFLWVAK 291 (462)
Q Consensus 267 ~~~~~~~~i~~al~~~~~~~i~~~~ 291 (462)
.+.+...+++++|.+.+.+.|-...
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~ 47 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATS 47 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcc
Confidence 6788888999999999998776654
No 129
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=37.25 E-value=1.3e+02 Score=28.24 Aligned_cols=40 Identities=3% Similarity=-0.119 Sum_probs=33.6
Q ss_pred EEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 13 HVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 13 ~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
-+++...|+.|--.=.+.++..++.+ |..|.|++.+....
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCCChh
Confidence 46777788999999999999999877 99999999885433
No 130
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=37.01 E-value=32 Score=31.81 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++||.|+-.+..| |-.+|+.|.++ ||+|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEcCC
Confidence 5789999999877 66799999888 9999986543
No 131
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=36.81 E-value=1.4e+02 Score=28.46 Aligned_cols=31 Identities=6% Similarity=-0.009 Sum_probs=20.0
Q ss_pred HHHHhccCCccEEEe--CCCcchHHHHHHHcCC
Q 012513 110 LKVLTESTRLVALVV--DCFGSAAFDVANELDV 140 (462)
Q Consensus 110 l~~~~~~~~~D~vI~--D~~~~~~~~vA~~lgI 140 (462)
+.++.++.++|.|+. |.....+..+|+.+|+
T Consensus 67 ~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lgl 99 (425)
T 3vot_A 67 VRQTFVEFPFDGVMTLFEPALPFTAKAAEALNL 99 (425)
T ss_dssp HHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTC
T ss_pred HHHhhhhcCCCEEEECCchhHHHHHHHHHHcCC
Confidence 334444558999884 4444445578888988
No 132
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=36.45 E-value=1.1e+02 Score=30.65 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=21.9
Q ss_pred ccccccCc------hhHHHHHHhCCceeecc
Q 012513 347 GFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 347 ~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
++++|.|- +.+.+|.+.++|+|++-
T Consensus 76 v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 76 VALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp EEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78888885 68999999999999984
No 133
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=36.39 E-value=2.2e+02 Score=27.24 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=74.8
Q ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHH---HhhCCCceEe
Q 012513 254 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVV 330 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~ 330 (462)
.+.|-|-+||- .+.+..+++...|+..+.++-..+.+... +|+.+. +....++.
T Consensus 265 ~~~V~Ii~gs~--SD~~~~~~a~~~l~~~gi~~~v~V~saHR-------------------~p~~~~~~~~~~~~~g~-- 321 (425)
T 2h31_A 265 QCRVVVLMGST--SDLGHCEKIKKACGNFGIPCELRVTSAHK-------------------GPDETLRIKAEYEGDGI-- 321 (425)
T ss_dssp CCEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------CHHHHHHHHHHHHTTCC--
T ss_pred CCeEEEEecCc--ccHHHHHHHHHHHHHcCCceEEeeeeccC-------------------CHHHHHHHHHHHHHCCC--
Confidence 35777878884 46677888999999999987666655433 444322 11111111
Q ss_pred ccCcchhhhhccccccccccccCch----hHHHHHHhCCceeecccccchhhhhHHhhcccc--eeEEeeecCCcccCHH
Q 012513 331 PSWSPQVQVLRHGSTGGFLSHCGWN----SILESIVHGVPIIAWPLYSEQKMNAVLLTDDLK--VSFRVKVNENGLVGRE 404 (462)
Q Consensus 331 ~~~~pq~~lL~~~~~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g--~G~~~~~~~~~~~~~~ 404 (462)
.. ++|.-.|.- ++..++ .-+|+|.+|....-......+.- +. .|+-+..-. +..++.
T Consensus 322 ------------~~--viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~-vqmp~g~pvatv~-~~~nAa 384 (425)
T 2h31_A 322 ------------PT--VFVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSS-LRLPSGLGCSTVL-SPEGSA 384 (425)
T ss_dssp ------------CE--EEEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGT-SSCCSSCCCEECC-CHHHHH
T ss_pred ------------Ce--EEEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHH-hcCCCCCceEEec-CchHHH
Confidence 01 355544433 555554 46899999985322222233332 23 233222211 124555
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHh
Q 012513 405 DIANYAKGLIQGEEGKLLRKKMRALKDAAAN 435 (462)
Q Consensus 405 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 435 (462)
-++..|.. +.|+ .++++.+..+..+..
T Consensus 385 ~~A~~Il~-~~~~---~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 385 QFAAQIFG-LSNH---LVWSKLRASILNTWI 411 (425)
T ss_dssp HHHHHHHH-TTCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-cCCH---HHHHHHHHHHHHHHH
Confidence 66666653 3453 677777776666654
No 134
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=36.08 E-value=80 Score=31.59 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=21.5
Q ss_pred ccccccCc------hhHHHHHHhCCceeecc
Q 012513 347 GFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 347 ~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
++++|.|- +.+.||-+.++|+|++-
T Consensus 73 v~~~TsGpG~~N~~~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 73 ICLTVSAPGFLNGLTALANATVNGFPMIMIS 103 (564)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEccCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 78888885 47789999999999985
No 135
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=35.94 E-value=74 Score=31.92 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=21.8
Q ss_pred ccccccCc------hhHHHHHHhCCceeecc
Q 012513 347 GFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 347 ~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
++++|.|- +.+.+|-+.++|+|++-
T Consensus 75 v~~~TsGpG~~N~~~~i~~A~~~~vPll~it 105 (568)
T 2c31_A 75 VCLTVSAPGFLNGVTSLAHATTNCFPMILLS 105 (568)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEcCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 78888886 57889999999999985
No 136
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=34.81 E-value=25 Score=28.12 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+.||+++-. |++- ..+++.|.++ ||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 356887743 5554 7889999887 9999999863
No 137
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=34.73 E-value=75 Score=28.03 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCc----------CC-HHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGM----------GH-LIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~----------GH-v~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|++|+++..... |- ..=++.--..|.+. |++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAA-GFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 457888877642 22 33467777888777 9999999975
No 138
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.67 E-value=1.9e+02 Score=23.78 Aligned_cols=140 Identities=14% Similarity=0.161 Sum_probs=74.8
Q ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHH---HhhCCCceEe
Q 012513 254 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFL---DRTKGVGLVV 330 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~ 330 (462)
.|.|-|-+||- .+.+..++....|+..+.++-..+-+..+ .|+.+. +..+.++
T Consensus 12 ~P~V~IimGS~--SD~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~l~~~~~~a~~~g--- 67 (173)
T 4grd_A 12 APLVGVLMGSS--SDWDVMKHAVAILQEFGVPYEAKVVSAHR-------------------MPDEMFDYAEKARERG--- 67 (173)
T ss_dssp SCSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHHHHHHHTTTT---
T ss_pred CCeEEEEeCcH--hHHHHHHHHHHHHHHcCCCEEEEEEcccc-------------------CHHHHHHHHHHHHhcC---
Confidence 45778888984 35677888999999999987666655433 444332 1222222
Q ss_pred ccCcchhhhhccccccccccccCc----hhHHHHHHhCCceeecccccchh---hhhHHhhcccceeEEeeecC---Ccc
Q 012513 331 PSWSPQVQVLRHGSTGGFLSHCGW----NSILESIVHGVPIIAWPLYSEQK---MNAVLLTDDLKVSFRVKVNE---NGL 400 (462)
Q Consensus 331 ~~~~pq~~lL~~~~~~~~I~HGG~----~t~~eal~~GvP~v~~P~~~DQ~---~~a~rv~~~~g~G~~~~~~~---~~~ 400 (462)
++++|.--|. .++..+ ..-+|+|.+|...... +--.-+.+ .=-|+-+..-. .+.
T Consensus 68 --------------~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a 131 (173)
T 4grd_A 68 --------------LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGA 131 (173)
T ss_dssp --------------CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHH
T ss_pred --------------CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcch
Confidence 2234443332 244444 3468999999765432 11111222 22232222211 011
Q ss_pred cCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhhc
Q 012513 401 VGREDIANYAKGLIQGEEGKLLRKKMRALKDAAANAL 437 (462)
Q Consensus 401 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 437 (462)
.+..-++..|.- +.| +.++++.+++++++++.+
T Consensus 132 ~NAallA~~ILa-~~d---~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 132 ANAALFAVSILS-GNS---VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHT-TSC---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCC---HHHHHHHHHHHHHHHHHH
Confidence 233334444432 346 488999888888887643
No 139
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=34.60 E-value=92 Score=32.09 Aligned_cols=79 Identities=6% Similarity=0.016 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhC-CCceEecc--------Ccc--hhh
Q 012513 270 EQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK-GVGLVVPS--------WSP--QVQ 338 (462)
Q Consensus 270 ~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~--------~~p--q~~ 338 (462)
...+.+++.|++.|.+.|+.+.+... -.+.+.+. ..++.... |+= +..
T Consensus 83 ~~a~~lv~~L~~~GV~~vFg~PG~~~---------------------~pl~dal~~~~~i~~v~~~hE~~Aa~aAdGyAr 141 (677)
T 1t9b_A 83 TGGQIFNEMMSRQNVDTVFGYPGGAI---------------------LPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYAR 141 (677)
T ss_dssp BHHHHHHHHHHHTTCCEEEECCCGGG---------------------HHHHHHTTTCSSSEEECCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCEEEEecCccH---------------------HHHHHHHHhCCCCeEEEeCChHHHHHHHHHHHH
Confidence 34567899999999998888776432 11111111 11111110 111 111
Q ss_pred hhccccccccccccCc------hhHHHHHHhCCceeecc
Q 012513 339 VLRHGSTGGFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 339 lL~~~~~~~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
+-.++. ++++|.|- +.+.+|.+.++|+|++-
T Consensus 142 ~tGkpg--vv~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 142 ASGKPG--VVLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp HHSSCE--EEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred HHCCCE--EEEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 222344 77888885 58999999999999985
No 140
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=34.43 E-value=59 Score=32.62 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=21.8
Q ss_pred ccccccCc------hhHHHHHHhCCceeecc
Q 012513 347 GFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 347 ~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
++++|.|- +.+.+|-+.++|+|++-
T Consensus 69 v~~~TsGpG~~N~~~~l~~A~~~~~Pll~it 99 (563)
T 2uz1_A 69 VALVTAGGGFTNAVTPIANAWLDRTPVLFLT 99 (563)
T ss_dssp EEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEccCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 78888885 68999999999999984
No 141
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=34.40 E-value=59 Score=32.99 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=22.4
Q ss_pred cccccccCc------hhHHHHHHhCCceeecc
Q 012513 346 GGFLSHCGW------NSILESIVHGVPIIAWP 371 (462)
Q Consensus 346 ~~~I~HGG~------~t~~eal~~GvP~v~~P 371 (462)
+++++|.|- +.+.+|-+.++|+|++-
T Consensus 96 gv~~~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 96 VLLICTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp EEEEECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 378888886 58899999999999985
No 142
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.27 E-value=38 Score=35.33 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=78.0
Q ss_pred eccCcchhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecC--Cc--ccCHHH
Q 012513 330 VPSWSPQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNE--NG--LVGRED 405 (462)
Q Consensus 330 ~~~~~pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~--~~--~~~~~~ 405 (462)
+.++.+-.++|..++ ++||-- ...+.|.+..++|+|....-.|++... . -|...+..+ .| .-+.++
T Consensus 603 ~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~---rg~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L---RGFYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C---CSBSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c---CCcccChhHhCCCCeECCHHH
Confidence 445566678898899 899885 468899999999999987666665321 1 233332211 11 247789
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhc
Q 012513 406 IANYAKGLIQGEEGKLLRKKMRALKDAAANALSPDGSSTKSLAQVAQRWKN 456 (462)
Q Consensus 406 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 456 (462)
|.++|.....+. ..|+++.+++.+..-.. +.|.++.+.++.+++....
T Consensus 673 L~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 673 LAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcC
Confidence 999998876532 47888888888887654 3477788888888877653
No 143
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=33.92 E-value=32 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
.|+|+++-. |.+- ..+++.|.++ ||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEEC
Confidence 478888833 6554 4678999887 999999875
No 144
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.64 E-value=1.7e+02 Score=25.34 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
.++++++..+.| + =.++|+.|+++ |++|.++.-
T Consensus 7 ~k~vlVTGas~G-I--G~aia~~l~~~-G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY-I--GAEIAKKFAAE-GFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH-H--HHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEeC
Confidence 357888877743 3 46899999988 999988764
No 145
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=33.55 E-value=32 Score=31.44 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=27.2
Q ss_pred CCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 8 QIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 8 ~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
...+|+|.++-.+..| ..+|+.|+++ ||+|+++..
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~-G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKN-GFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHC-CCeEEEEeC
Confidence 3457899999766555 5688999887 999998754
No 146
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=33.34 E-value=43 Score=31.06 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=22.8
Q ss_pred ccccccCchhHHHHHH------hCCceeecccc
Q 012513 347 GFLSHCGWNSILESIV------HGVPIIAWPLY 373 (462)
Q Consensus 347 ~~I~HGG~~t~~eal~------~GvP~v~~P~~ 373 (462)
++|.-||=||+.|++. .++|+.++|..
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 8999999999999853 46899999974
No 147
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=32.70 E-value=60 Score=24.30 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=21.3
Q ss_pred cCCHHHHHHHHHHHHhcCCC-EEEEEeCC
Q 012513 22 MGHLIPLAQLAKRLVRQHNF-LVSIFIPT 49 (462)
Q Consensus 22 ~GHv~P~l~La~~L~~r~GH-~Vt~~~~~ 49 (462)
.......+.+|..+.+.+|| +|+++...
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 34566778999998765599 99988865
No 148
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.57 E-value=49 Score=27.67 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCcCCHHHHHH-HHHHHHhcCCCEEEEEeCCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQ-LAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~-La~~L~~r~GH~Vt~~~~~~ 50 (462)
++|+|+++-.. .|+..-+.. +++.|.+. |++|.++....
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~-g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEA-GAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHH-SCEEEEEECCC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhC-CCEEEEEehhH
Confidence 35788888777 888766544 56667666 99999887553
No 149
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=32.54 E-value=43 Score=30.23 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
.++|+|.++-.+..|. .+|+.|.+. ||+|+++..
T Consensus 2 ~~~~~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~~ 35 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGK-----PMAINLLKE-GVTVYAFDL 35 (301)
T ss_dssp --CCEEEEECCCTTHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCCCEEEEECccHHHH-----HHHHHHHHC-CCeEEEEeC
Confidence 3468999997766664 468888887 999987653
No 150
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=31.96 E-value=56 Score=29.81 Aligned_cols=38 Identities=16% Similarity=0.048 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCcCC----HHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGH----LIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GH----v~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++||+++..+-.+- +..-..++++|.+. ||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~-g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDA-GIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 57888888764332 35678899999887 9999998854
No 151
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=31.18 E-value=1.3e+02 Score=30.05 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=22.8
Q ss_pred ccccccccCch------hHHHHHHhCCceeecc
Q 012513 345 TGGFLSHCGWN------SILESIVHGVPIIAWP 371 (462)
Q Consensus 345 ~~~~I~HGG~~------t~~eal~~GvP~v~~P 371 (462)
.+++++|.|-| .+++|-+.++|+|++-
T Consensus 72 pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 72 PVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 33788888865 8899999999999985
No 152
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=31.04 E-value=72 Score=31.62 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=20.2
Q ss_pred ccccccCc------hhHHHHHHhCCceeec
Q 012513 347 GFLSHCGW------NSILESIVHGVPIIAW 370 (462)
Q Consensus 347 ~~I~HGG~------~t~~eal~~GvP~v~~ 370 (462)
++++|.|. +.+.+|-+.++|+|++
T Consensus 66 v~~~tsGpG~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 66 FINLHSAAGTGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp EEEEEHHHHHHHTHHHHHHHHHTTCCEEEE
T ss_pred EEEEcCChHHHHHHHHHHHHhhcCCCEEEE
Confidence 67777764 4789999999999999
No 153
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=31.02 E-value=60 Score=24.68 Aligned_cols=65 Identities=12% Similarity=0.047 Sum_probs=42.5
Q ss_pred hccccccccccccCchh---------HHHHHHhCCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHH
Q 012513 340 LRHGSTGGFLSHCGWNS---------ILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYA 410 (462)
Q Consensus 340 L~~~~~~~~I~HGG~~t---------~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai 410 (462)
+..++ ++|--.|..| +..|...|+|++++=..+.+- .-..+++ .+.- .+ .++.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~-~a~~-iV------~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA-VSSE-VV------GWNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH-HCSE-EE------CSCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh-hCce-ec------cCCHHHHHHHH
Confidence 34566 6777778777 667888999999987776541 1111332 1211 11 18999999999
Q ss_pred HHHhc
Q 012513 411 KGLIQ 415 (462)
Q Consensus 411 ~~vl~ 415 (462)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98763
No 154
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=30.80 E-value=36 Score=28.52 Aligned_cols=39 Identities=10% Similarity=0.153 Sum_probs=31.1
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDD 52 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~ 52 (462)
+||++.-.++.|=+ =...+.+.|.++ |++|.++.++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQH-FDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchhHH
Confidence 47888888885555 678999999877 9999999987543
No 155
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=30.77 E-value=31 Score=29.27 Aligned_cols=38 Identities=0% Similarity=-0.077 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
.+||++.-.++.|=+. ...|.+.|.++ |++|.++.++.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~~ 45 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTKT 45 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEchh
Confidence 4588888888866664 78999999876 99999998763
No 156
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=30.66 E-value=82 Score=26.46 Aligned_cols=63 Identities=14% Similarity=0.190 Sum_probs=44.1
Q ss_pred cceeEEeeecCCcccCHHHHHHHHHHHhcCch----HHHHHHHHHHHHHHHHh----hcCCCCChHHHHHHHHHHHhcCC
Q 012513 387 LKVSFRVKVNENGLVGREDIANYAKGLIQGEE----GKLLRKKMRALKDAAAN----ALSPDGSSTKSLAQVAQRWKNPE 458 (462)
Q Consensus 387 ~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~----~~~~r~~a~~l~~~~~~----~~~~~g~~~~~~~~~~~~l~~~~ 458 (462)
-|+|+. +|+|+|.++|.+++...+ -..|+ +.-.+-..+|+ -|+.+..-...+++-+-++-+..
T Consensus 111 cGVGV~--------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~lLGPK 181 (187)
T 3tl4_X 111 SGVGIE--------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPK 181 (187)
T ss_dssp TTTTCC--------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHHHCSC
T ss_pred CCCCeE--------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHcCCc
Confidence 899976 799999999999996422 23455 56666666654 35667777778887777776553
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.19 E-value=50 Score=26.34 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
..++|+++-. |.+- ..+++.|.++ |++|+++...
T Consensus 18 ~~~~v~IiG~---G~iG--~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRLG--SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 3578988854 4443 5678899887 9999998754
No 158
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=30.16 E-value=2.3e+02 Score=23.26 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=75.3
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCc
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWS 334 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 334 (462)
+.|-|-+||- .+.+..+++...|+..+.++-..+.+... .|+.+.+ |+
T Consensus 7 ~~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------~p~~~~~-----------~~ 54 (169)
T 3trh_A 7 IFVAILMGSD--SDLSTMETAFTELKSLGIPFEAHILSAHR-------------------TPKETVE-----------FV 54 (169)
T ss_dssp CEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHHH-----------HH
T ss_pred CcEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------CHHHHHH-----------HH
Confidence 3677778884 35677888999999999987766655433 4443221 11
Q ss_pred chhhhhccccccccccccCchhHHHHHHh---CCceeecccccchh-hhhHHhhc---ccceeEE-eeecCCcccCHHHH
Q 012513 335 PQVQVLRHGSTGGFLSHCGWNSILESIVH---GVPIIAWPLYSEQK-MNAVLLTD---DLKVSFR-VKVNENGLVGREDI 406 (462)
Q Consensus 335 pq~~lL~~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ~-~~a~rv~~---~~g~G~~-~~~~~~~~~~~~~l 406 (462)
-.. ....+++||.=.|.-.-+-++.+ -+|+|.+|...... .....+.- =.|+.+. +...+.+..+..-+
T Consensus 55 ~~a---~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~l 131 (169)
T 3trh_A 55 ENA---DNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAIL 131 (169)
T ss_dssp HHH---HHTTEEEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHH
T ss_pred HHH---HhCCCcEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHH
Confidence 000 01112256666664433333333 58999999864221 22222211 0233211 11110011344455
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhh
Q 012513 407 ANYAKGLIQGEEGKLLRKKMRALKDAAANA 436 (462)
Q Consensus 407 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~ 436 (462)
+..|..+ .| +.++++.+.+++.+++.
T Consensus 132 Aa~Il~~-~d---~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 132 AAQIIAL-QD---KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHT-TC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CC---HHHHHHHHHHHHHHHHH
Confidence 5555444 45 48888888888888764
No 159
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=29.96 E-value=41 Score=28.83 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHh-cCCCEEEEEeCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVR-QHNFLVSIFIPTIDD 52 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~-r~GH~Vt~~~~~~~~ 52 (462)
++||++.-.++.+=+ -...|.++|.+ + |++|.++.++...
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~-g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIP-GLEVAVVTTERAK 59 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC----CEEEEEEECTGGG
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhccc-CCEEEEEECHhHH
Confidence 468888888886644 56999999987 6 9999999987433
No 160
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=29.85 E-value=33 Score=31.07 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+|+|+++-.+..| ..+|..|.++ ||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~-g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQG-GNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhC-CCcEEEEEC
Confidence 5899999776655 4678899887 999998864
No 161
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=29.78 E-value=58 Score=28.33 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=24.0
Q ss_pred cccccccCchhHHHHHHhCCceeeccccc
Q 012513 346 GGFLSHCGWNSILESIVHGVPIIAWPLYS 374 (462)
Q Consensus 346 ~~~I~HGG~~t~~eal~~GvP~v~~P~~~ 374 (462)
.++|+.||....+..- .++|+|-+++.+
T Consensus 65 dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 65 DAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp SEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred eEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 3899999999988875 579999999755
No 162
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.70 E-value=28 Score=27.27 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++||+++-. |.+ -..+++.|.++ ||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHT-TCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHC-CCeEEEEECC
Confidence 457888755 443 46789999887 9999988753
No 163
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=29.63 E-value=35 Score=29.60 Aligned_cols=38 Identities=16% Similarity=0.061 Sum_probs=32.4
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
|+|++..-++.|=-.-...||..|+++ |++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 678887778888899999999999887 99999987653
No 164
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.57 E-value=89 Score=28.94 Aligned_cols=30 Identities=3% Similarity=0.034 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEEEeCCcc
Q 012513 266 TLSQEQLNELALGLEMSGQRFLWVAKSPHE 295 (462)
Q Consensus 266 ~~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 295 (462)
..+.+..+.+.+++.....+.||.+.++..
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGYN 90 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 345566888999999888899998887643
No 165
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=29.47 E-value=61 Score=24.82 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCcCCH--HHHHHHHHHHHhcCC--CEEEEEeCC
Q 012513 10 PRAHVAMVPTPGMGHL--IPLAQLAKRLVRQHN--FLVSIFIPT 49 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv--~P~l~La~~L~~r~G--H~Vt~~~~~ 49 (462)
..|+++++-.-..-.. +--+..|....++ | |+|.++.-.
T Consensus 6 ~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~-G~~~eV~i~~~G 48 (117)
T 2fb6_A 6 ANDKLTILWTTDNKDTVFNMLAMYALNSKNR-GWWKHINIILWG 48 (117)
T ss_dssp TTSEEEEEECCCCHHHHHHTHHHHHHHHHHH-TSCSEEEEEECS
T ss_pred cCCeEEEEEEcCChHHHHHHHHHHHHHHHHc-CCCCcEEEEEEC
Confidence 3466666665532222 3367788888888 9 899998843
No 166
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.34 E-value=43 Score=30.35 Aligned_cols=39 Identities=21% Similarity=0.094 Sum_probs=23.8
Q ss_pred CCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 7 KQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 7 ~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
....+++.++++.++ |.+- ..|+++|.++ ||+|+.+.-.
T Consensus 7 ~~~~~~~~vlVTGat-G~iG--~~l~~~L~~~-G~~V~~~~r~ 45 (321)
T 2pk3_A 7 HHHHGSMRALITGVA-GFVG--KYLANHLTEQ-NVEVFGTSRN 45 (321)
T ss_dssp ------CEEEEETTT-SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred ccccCcceEEEECCC-ChHH--HHHHHHHHHC-CCEEEEEecC
Confidence 334455556666554 6553 5788999887 9999987743
No 167
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=28.96 E-value=78 Score=29.20 Aligned_cols=30 Identities=17% Similarity=-0.032 Sum_probs=24.0
Q ss_pred cccccccccccCchhHHHHH--------HhCCceeecccc
Q 012513 342 HGSTGGFLSHCGWNSILESI--------VHGVPIIAWPLY 373 (462)
Q Consensus 342 ~~~~~~~I~HGG~~t~~eal--------~~GvP~v~~P~~ 373 (462)
.++ ++|.-||=||+.|++ ..++|+.++|..
T Consensus 82 ~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 82 GVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp TCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred CCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 455 799999999999875 357899999974
No 168
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=28.79 E-value=36 Score=32.32 Aligned_cols=42 Identities=7% Similarity=-0.081 Sum_probs=26.1
Q ss_pred ccccCCCCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 2 ETQNSKQIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 2 ~~~~~~~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+.++++..++++|+++--+-. =+.+|..|+++ |++|+++--.
T Consensus 14 ~~~~~~~~~~~dV~IVGaG~a-----Gl~~A~~La~~-G~~V~v~E~~ 55 (407)
T 3rp8_A 14 SGENLYFQGHMKAIVIGAGIG-----GLSAAVALKQS-GIDCDVYEAV 55 (407)
T ss_dssp ---------CCEEEEECCSHH-----HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCCcccCCCCCEEEEECCCHH-----HHHHHHHHHhC-CCCEEEEeCC
Confidence 344445556789999866643 37889999887 9999998643
No 169
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.39 E-value=37 Score=31.97 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFI 47 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~ 47 (462)
.|||+++--+--| +.+|..|+++ ||+|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCCEEEEe
Confidence 3789988666444 7889999887 99999984
No 170
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=28.35 E-value=42 Score=30.66 Aligned_cols=134 Identities=14% Similarity=-0.014 Sum_probs=74.0
Q ss_pred CeEEEEEeCCC---CCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhC--CCce
Q 012513 254 ESVLFVCFGSG---GTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTK--GVGL 328 (462)
Q Consensus 254 ~~~v~vs~Gs~---~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~ 328 (462)
++.|.+.-|+. ...+.+.+.++++.|.+.+.++++..++... ....+++. -.++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e---------------------~~~~~~i~~~~~~~ 236 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE---------------------EERAKRLAEGFAYV 236 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH---------------------HHHHHHHHTTCTTE
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH---------------------HHHHHHHHhhCCcc
Confidence 34777777764 4567788888888887666665554343211 00111110 0122
Q ss_pred EeccCc---chhhhhccccccccccccCchhHHHHHHhCCceeecccccchhhhhHHhhcccceeE-Eeee--cCCcccC
Q 012513 329 VVPSWS---PQVQVLRHGSTGGFLSHCGWNSILESIVHGVPIIAWPLYSEQKMNAVLLTDDLKVSF-RVKV--NENGLVG 402 (462)
Q Consensus 329 ~~~~~~---pq~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~-~~~~--~~~~~~~ 402 (462)
.+.+-. .-.+++.+++ ++|+.= .|+++=|.+.|+|+|++=-..|-..++- +|-.. .+.. .--..++
T Consensus 237 ~l~g~~sl~el~ali~~a~--l~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~~~P-----~~~~~~~~~~~~~cm~~I~ 308 (326)
T 2gt1_A 237 EVLPKMSLEGVARVLAGAK--FVVSVD-TGLSHLTAALDRPNITVYGPTDPGLIGG-----YGKNQMVCRAPGNELSQLT 308 (326)
T ss_dssp EECCCCCHHHHHHHHHTCS--EEEEES-SHHHHHHHHTTCCEEEEESSSCHHHHCC-----CSSSEEEEECGGGCGGGCC
T ss_pred cccCCCCHHHHHHHHHhCC--EEEecC-CcHHHHHHHcCCCEEEEECCCChhhcCC-----CCCCceEecCCcccccCCC
Confidence 232322 2377888999 899983 2345557779999999811122111111 22111 1111 0011389
Q ss_pred HHHHHHHHHHHhcC
Q 012513 403 REDIANYAKGLIQG 416 (462)
Q Consensus 403 ~~~l~~ai~~vl~~ 416 (462)
+|++.+++++++.+
T Consensus 309 ~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 309 ANAVKQFIEENAEK 322 (326)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 171
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=28.06 E-value=62 Score=29.67 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
++|+|.++-.+..| ..+|+.|.++ ||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcC
Confidence 46899999877777 6688999887 999998754
No 172
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=27.88 E-value=2.6e+02 Score=26.02 Aligned_cols=39 Identities=10% Similarity=-0.037 Sum_probs=33.2
Q ss_pred EEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCC
Q 012513 13 HVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDD 52 (462)
Q Consensus 13 ~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~ 52 (462)
-+++.-.|+.|--.=.+.++..++.+ |..|.|++.+...
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~s~ 103 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHAL 103 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 47777788999999999999999887 9999999987543
No 173
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.81 E-value=2.3e+02 Score=24.25 Aligned_cols=120 Identities=13% Similarity=0.056 Sum_probs=0.0
Q ss_pred eEEEEEeCCCCCCCH---HHHHHHHHHHHhCCCceEEEEeC-------------CcccccccccccccCCCCCCCCCChh
Q 012513 255 SVLFVCFGSGGTLSQ---EQLNELALGLEMSGQRFLWVAKS-------------PHEEAANATYFSVQSMKDPLDFLPKG 318 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~---~~~~~i~~al~~~~~~~i~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~lp~~ 318 (462)
+.|-|-.||....++ +...++.+.|.+.+..+|.--+. ... ....-+|+.
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG--------------~~iGv~p~~ 75 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL--------------HVLGIIPKA 75 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC--------------CEEEEEEGG
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC--------------cEEEEechh
Q ss_pred HHHhhCCCc----eEeccCcch-hhhhccccccccccccCchhHHHHH---------HhCCceeecc---cccchhhhhH
Q 012513 319 FLDRTKGVG----LVVPSWSPQ-VQVLRHGSTGGFLSHCGWNSILESI---------VHGVPIIAWP---LYSEQKMNAV 381 (462)
Q Consensus 319 ~~~~~~~~~----~~~~~~~pq-~~lL~~~~~~~~I~HGG~~t~~eal---------~~GvP~v~~P---~~~DQ~~~a~ 381 (462)
+..+-...+ +++...++. ..++-.-+-.+++--||.||+-|-. .+++|++.+- ++.+-..+-.
T Consensus 76 l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~ 155 (216)
T 1ydh_A 76 LMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFD 155 (216)
T ss_dssp GHHHHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHH
T ss_pred cCccccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHH
Q ss_pred Hhhcccce
Q 012513 382 LLTDDLKV 389 (462)
Q Consensus 382 rv~~~~g~ 389 (462)
.+.+ -|.
T Consensus 156 ~~~~-~Gf 162 (216)
T 1ydh_A 156 TGVE-EGF 162 (216)
T ss_dssp HHHH-TTS
T ss_pred HHHH-CCC
No 174
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=27.74 E-value=2.8e+02 Score=25.23 Aligned_cols=114 Identities=17% Similarity=0.066 Sum_probs=63.6
Q ss_pred HHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccC
Q 012513 274 ELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCG 353 (462)
Q Consensus 274 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG 353 (462)
++++.++..+..++++++.... +|+.+.+..+...+-+ |++ +.=-+-|
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~i-------------------lp~~il~~~~~g~iNi-----------HpS--LLP~yRG 119 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLI-------------------LPKAVLEMPRLGCINV-----------HGS--LLPRWRG 119 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSC-------------------CCHHHHHSSTTCEEEE-----------ESS--STTTTBS
T ss_pred HHHHHHHhcCCCEEEEeecccc-------------------CCHHHHhhccCCEEEE-----------cCC--cCcCCCC
Confidence 4556667777787777765433 6776654433222222 455 4455668
Q ss_pred chhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 354 WNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 354 ~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
...+..|+.+|...-++-++. +..+.+.-+.+ .- +.+... -|.++|.+.+.++-. .-+.+....+.
T Consensus 120 ~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q-~~--~~I~~~----dt~~~L~~rl~~~~~----~ll~~~l~~l~ 187 (314)
T 1fmt_A 120 AAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYK-LS--CPITAE----DTSGTLYDKLAELGP----QGLITTLKQLA 187 (314)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-EE--EECCTT----CCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred cCHHHHHHHcCCCceEEEEEEEcccCcCCCEEEE-EE--EecCCC----CCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999999999999988777543 22332222222 11 112222 467777776655432 24555544443
No 175
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=27.64 E-value=41 Score=29.47 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
++|+|.++-.+..|- .||+.|.++ ||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecC
Confidence 468999999998884 589999887 999997654
No 176
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.44 E-value=33 Score=31.09 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=26.3
Q ss_pred hhhccccccccccccCchhHHHHHHh----CCceeeccc
Q 012513 338 QVLRHGSTGGFLSHCGWNSILESIVH----GVPIIAWPL 372 (462)
Q Consensus 338 ~lL~~~~~~~~I~HGG~~t~~eal~~----GvP~v~~P~ 372 (462)
.+-..++ ++|.-||=||+++++.. ++|++.++.
T Consensus 59 ~~~~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3344567 89999999999999843 789998884
No 177
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=27.43 E-value=83 Score=28.96 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 8 QIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 8 ~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
+.+||||+|+-.|. -.+...++|.++ ||+|..+.+....+
T Consensus 1 ~~~mmrIvf~Gtp~-----fa~~~L~~L~~~-~~~v~~Vvt~pd~~ 40 (317)
T 3rfo_A 1 SNAMIKVVFMGTPD-----FSVPVLRRLIED-GYDVIGVVTQPDRP 40 (317)
T ss_dssp CCTTSEEEEECCST-----THHHHHHHHHHT-TCEEEEEECCCCCE
T ss_pred CCCceEEEEEeCCH-----HHHHHHHHHHHC-CCcEEEEEeCCCcc
No 178
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.90 E-value=95 Score=25.31 Aligned_cols=29 Identities=14% Similarity=0.243 Sum_probs=24.1
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQ 284 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~ 284 (462)
.+|+++||....+...++..+++|+..+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCC
Confidence 58999999877788888888899987643
No 179
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=26.88 E-value=74 Score=25.93 Aligned_cols=28 Identities=25% Similarity=0.224 Sum_probs=22.7
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSG 283 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~ 283 (462)
.+|+++||....+...++..+++|+..+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999976666777888888888764
No 180
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.70 E-value=83 Score=24.68 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=27.5
Q ss_pred cEEEEEcCCCcCCHHHHH-HHHHHHHhcCCCEEEEEeCCCC
Q 012513 12 AHVAMVPTPGMGHLIPLA-QLAKRLVRQHNFLVSIFIPTID 51 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l-~La~~L~~r~GH~Vt~~~~~~~ 51 (462)
|+|+++-...+|+..-+. .|++.|.++ |++|.++.....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~-g~~v~~~~~~~~ 41 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAG-GHEVTLLNAADA 41 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTT-TCEEEEEETTTB
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhC-CCeEEEEehhhC
Confidence 566666666678876544 467777766 999999876643
No 181
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=26.56 E-value=89 Score=27.64 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
+||||+.==.+. |.-=+..|++.|.+. | +|+++.|...+.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 40 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCCCcc
Confidence 478766554443 555688999999765 7 999999987665
No 182
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.43 E-value=67 Score=27.16 Aligned_cols=34 Identities=9% Similarity=0.193 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHH-hcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLV-RQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~-~r~GH~Vt~~~~ 48 (462)
||+.++++..+ |-+ =..+++.|. ++ ||+|+.+.-
T Consensus 4 mmk~vlVtGas-g~i--G~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAA-GQI--AQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTT-SHH--HHHHHHHHHHHC-CCEEEEEES
T ss_pred eEEEEEEEeCC-cHH--HHHHHHHHHhcC-CceEEEEec
Confidence 56756666544 444 367889998 67 999998874
No 183
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.34 E-value=69 Score=26.89 Aligned_cols=32 Identities=6% Similarity=0.194 Sum_probs=22.5
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
|+|++. ++.|.+- ..|+++|.++ ||+|+.++-
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~-g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNR-GHEVTAIVR 32 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhC-CCEEEEEEc
Confidence 465443 3345553 5789999988 999998874
No 184
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=26.10 E-value=58 Score=30.63 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=26.6
Q ss_pred cEEEEEcC--CCcC-CHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 12 AHVAMVPT--PGMG-HLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 12 ~~ill~~~--p~~G-Hv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
|||++++. |..| --.-...|+++|++ + |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~-~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISK-A-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTT-T-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHh-c-CCeEEEeecC
Confidence 68888752 4334 44557889999965 5 9999998653
No 185
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=26.06 E-value=92 Score=23.29 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFI 47 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~ 47 (462)
+.|+|+++|..+.|+-.=...|-+.+.++ |.++.+-+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~-gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSK-NINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHH-TCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHC-CCCeEEEE
Confidence 45889999999999986666777788776 98776544
No 186
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=25.91 E-value=1.9e+02 Score=22.28 Aligned_cols=48 Identities=10% Similarity=-0.033 Sum_probs=32.2
Q ss_pred hCCceeecccccchhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcC
Q 012513 363 HGVPIIAWPLYSEQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQG 416 (462)
Q Consensus 363 ~GvP~v~~P~~~DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~ 416 (462)
..+|+|++--..|. .......+ .|+--.+.+. ++.++|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHH
Confidence 47888888654443 33444444 5765455443 8999999999999864
No 187
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.90 E-value=61 Score=29.14 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|++. ++.|.+- ..++++|.++ ||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~-g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISL-GHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHT-TCCEEEECCS
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhC-CCcEEEEECC
Confidence 4555554 3446653 5678999887 9999987743
No 188
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=25.82 E-value=87 Score=28.45 Aligned_cols=27 Identities=11% Similarity=-0.006 Sum_probs=23.1
Q ss_pred ccccccCchhHHHHHH------hCCceeecccc
Q 012513 347 GFLSHCGWNSILESIV------HGVPIIAWPLY 373 (462)
Q Consensus 347 ~~I~HGG~~t~~eal~------~GvP~v~~P~~ 373 (462)
++|.-||=||+.|.+. .++|+-++|..
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 7999999999999764 57999999974
No 189
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=25.53 E-value=47 Score=28.11 Aligned_cols=31 Identities=10% Similarity=0.166 Sum_probs=25.4
Q ss_pred ccccccccccCchhHHHHHHhCCceeeccccc
Q 012513 343 GSTGGFLSHCGWNSILESIVHGVPIIAWPLYS 374 (462)
Q Consensus 343 ~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~ 374 (462)
..+.++|+.||.......- .++|+|-+++.+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3344899999999988875 579999999865
No 190
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=25.51 E-value=57 Score=29.37 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=27.3
Q ss_pred cEEEEEcCCCcCC---HHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGH---LIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GH---v~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|+|+++..+.... ......++++|.++ ||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~-G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRR-GYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHT-TCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHC-CCEEEEEchh
Confidence 6899999874321 12346799999887 9999998864
No 191
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=25.23 E-value=71 Score=30.96 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=35.0
Q ss_pred EEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 13 HVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 13 ~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
-+++...|+.|=-.-.+.+|...+.+ |..|.|++.+....
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHH
Confidence 47788889999999999999999887 99999999886554
No 192
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=24.85 E-value=48 Score=30.29 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|+++-.++.| ..+|..|.++ ||+|+++...
T Consensus 2 ~mkI~IiGaGaiG-----~~~a~~L~~~-g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALG-----LYYGALLQRS-GEDVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTH-----HHHHHHHHHT-SCCEEEECST
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHC-CCeEEEEEcC
Confidence 4789999888877 4578899887 9999998864
No 193
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=24.77 E-value=47 Score=30.47 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIF 46 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~ 46 (462)
..+|+|+++-.++.| ..+|..|+++ ||+|+++
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~-G~~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARA-GHEVILI 48 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHC-CCeEEEE
Confidence 457899999887766 5678899887 9999998
No 194
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=24.67 E-value=90 Score=25.51 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=22.6
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSG 283 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~ 283 (462)
.+|+++||....+...++..+++|...+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 7999999976666677888888888754
No 195
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=24.59 E-value=90 Score=28.39 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+.|+|++. ++.|.+- ..|+++|.++ ||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~iG--~~l~~~L~~~-g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCLG--SNLIEHWLPQ-GHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHHH--HHHHHHHGGG-TCEEEEEEC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEEC
Confidence 34665544 3335553 5789999888 999998875
No 196
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=24.54 E-value=48 Score=30.40 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|+++-.++.| ..+|..|.++ ||+|+++...
T Consensus 2 ~mkI~IiGaGaiG-----~~~a~~L~~~-g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIG-----SFYGALLAKT-GHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHH-----HHHHHHHHHT-TCEEEEECST
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeCC
Confidence 4799999777766 4678899887 9999998864
No 197
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=24.36 E-value=2.6e+02 Score=25.55 Aligned_cols=68 Identities=25% Similarity=0.129 Sum_probs=45.0
Q ss_pred HHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccC
Q 012513 274 ELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCG 353 (462)
Q Consensus 274 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG 353 (462)
++++.++.....++++++.... +|+.+.+..+...+- =|++ +.=-+-|
T Consensus 76 ~~~~~l~~~~~Dliv~~~y~~i-------------------lp~~~l~~~~~g~iN-----------iHpS--lLP~yRG 123 (318)
T 3q0i_A 76 ESKQQLAALNADLMVVVAYGLL-------------------LPKVVLDTPKLGCIN-----------VHGS--ILPRWRG 123 (318)
T ss_dssp HHHHHHHTTCCSEEEESSCCSC-------------------CCHHHHTSSTTCEEE-----------EESS--STTTTBS
T ss_pred HHHHHHHhcCCCEEEEeCcccc-------------------CCHHHHhhCcCCEEE-----------eCCc--cCcCCCC
Confidence 4567777777787777765433 676655433222221 2555 4555669
Q ss_pred chhHHHHHHhCCceeecccc
Q 012513 354 WNSILESIVHGVPIIAWPLY 373 (462)
Q Consensus 354 ~~t~~eal~~GvP~v~~P~~ 373 (462)
...+..|+.+|....++-++
T Consensus 124 ~~pi~~Ai~~G~~~tGvTih 143 (318)
T 3q0i_A 124 AAPIQRSIWAGDSETGVTIM 143 (318)
T ss_dssp SCHHHHHHHHTCSEEEEEEE
T ss_pred cCHHHHHHHcCCCeEEEEEE
Confidence 99999999999999777754
No 198
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=24.00 E-value=2.3e+02 Score=21.56 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=22.1
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHhC-C-CceEEEE
Q 012513 255 SVLFVCFGSGGTLSQEQLNELALGLEMS-G-QRFLWVA 290 (462)
Q Consensus 255 ~~v~vs~Gs~~~~~~~~~~~i~~al~~~-~-~~~i~~~ 290 (462)
.+|+|+.||-.......+..+.+.++.. + ..+.+.+
T Consensus 5 alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~ 42 (133)
T 2xws_A 5 GLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAF 42 (133)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeee
Confidence 5999999995322334567777777654 2 3444443
No 199
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=23.94 E-value=50 Score=30.58 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+|+|+++-.+..| ..+|..|.++ ||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~-g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALK-GQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhC-CCEEEEEeC
Confidence 4799999776655 3478889887 999998864
No 200
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=23.90 E-value=79 Score=29.49 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=21.5
Q ss_pred cccccccccccCchhH---HHHHHhCCceeec
Q 012513 342 HGSTGGFLSHCGWNSI---LESIVHGVPIIAW 370 (462)
Q Consensus 342 ~~~~~~~I~HGG~~t~---~eal~~GvP~v~~ 370 (462)
+|+ ++|++||+-+. ..|...|+|+++.
T Consensus 92 ~PD--vVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPV--CVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCS--EEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCC--EEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 577 89999998764 5677889999974
No 201
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=23.81 E-value=2.3e+02 Score=21.44 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=23.1
Q ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHhCCCceEEEE
Q 012513 254 ESVLFVCFGSGGTLSQEQLNELALGLEMSGQRFLWVA 290 (462)
Q Consensus 254 ~~~v~vs~Gs~~~~~~~~~~~i~~al~~~~~~~i~~~ 290 (462)
..+|+|+.||-.......+..+.+.++.....+.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 3599999999532223456777777766544444443
No 202
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=23.64 E-value=92 Score=25.41 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=23.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQ 284 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~ 284 (462)
.+|+++||....+...++..+++|+..+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCCC
Confidence 58999999766667778888888887643
No 203
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=23.57 E-value=59 Score=29.36 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+|+|.++-.+..|. .+|+.|.++ ||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~-G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKA-GYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhC-CCeEEEEcC
Confidence 67999997777664 678899887 999998854
No 204
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=23.55 E-value=2.6e+02 Score=27.00 Aligned_cols=92 Identities=7% Similarity=-0.049 Sum_probs=48.6
Q ss_pred hhhccccccccccccCchh-----HHHHHHhCCceeecccccchhhhhHHh-----hcccceeEEeeecCCcccCHHHHH
Q 012513 338 QVLRHGSTGGFLSHCGWNS-----ILESIVHGVPIIAWPLYSEQKMNAVLL-----TDDLKVSFRVKVNENGLVGREDIA 407 (462)
Q Consensus 338 ~lL~~~~~~~~I~HGG~~t-----~~eal~~GvP~v~~P~~~DQ~~~a~rv-----~~~~g~G~~~~~~~~~~~~~~~l~ 407 (462)
..|..++ ++|.--|.-. ..+|-..|+|+-++ |.+..+... .+ -++=+.+..+.....-...|+
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~-~~l~iaIsT~Gksp~la~~ir 140 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDR-SPLMVAVSSGGTSPVLARLLR 140 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEE-TTEEEEEECTTSCHHHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEe-CCeEEEEECCCCChHHHHHHH
Confidence 3455666 6776666553 34456678886332 333333322 22 233333333221122256788
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHhhc
Q 012513 408 NYAKGLIQGEEGKLLRKKMRALKDAAANAL 437 (462)
Q Consensus 408 ~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 437 (462)
+.|+..+.. +-..+-+.+.++++.+++..
T Consensus 141 ~~ie~~l~~-~~~~~~~~~~~~R~~~~~~~ 169 (457)
T 1pjq_A 141 EKLESLLPQ-HLGQVARYAGQLRARVKKQF 169 (457)
T ss_dssp HHHHHHSCT-THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcch-hHHHHHHHHHHHHHHHHhhC
Confidence 888888854 22356666777777777654
No 205
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.48 E-value=46 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+.||+++-++-.| ..+|+.|.++ ||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECC
Confidence 4688888765444 5789999887 9999999864
No 206
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.40 E-value=78 Score=28.78 Aligned_cols=31 Identities=23% Similarity=0.492 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFI 47 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~ 47 (462)
+.+|.|+-.+..|. .+|+.|.++ ||+|+++-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~-G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKA-GYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHT-TCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhC-CCeEEEEc
Confidence 45899999998884 679999887 99999874
No 207
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=23.31 E-value=65 Score=29.37 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|+++..+ ....+++++.++ ||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~-G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDE-GFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHT-TCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhC-CCEEEEEECC
Confidence 4789988876 467889999887 9999988765
No 208
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=23.23 E-value=2.2e+02 Score=28.40 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=22.3
Q ss_pred cccccccCch------hHHHHHHhCCceeecc
Q 012513 346 GGFLSHCGWN------SILESIVHGVPIIAWP 371 (462)
Q Consensus 346 ~~~I~HGG~~------t~~eal~~GvP~v~~P 371 (462)
+++++|.|-| .+.+|-+.++|+|++-
T Consensus 76 gv~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 76 VVLLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp EEEEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 3788888865 7889999999999985
No 209
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=23.18 E-value=68 Score=29.28 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCcCCHHH-HHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIP-LAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P-~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+++|+++..|..++... ...+.+.|.++ |++|.+...
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDN-KIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTT-TCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHC-CCEEEEecc
Confidence 56899999998887644 67888888876 999887543
No 210
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.02 E-value=54 Score=29.23 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=24.7
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|+|+++-.+..| ..+|..|.++ ||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~-g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQ-GHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhC-CCCEEEEEcC
Confidence 578888766655 4688999887 9999998643
No 211
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=22.96 E-value=1.4e+02 Score=26.16 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=26.3
Q ss_pred cEEEEEcC-----CCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 12 AHVAMVPT-----PGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 12 ~~ill~~~-----p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
++|+++.. ++. -..=+......|.+. |++|+++++..
T Consensus 24 kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~a-G~~V~~~S~~~ 65 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGS-EIREAVLVMLELDRH-NVNFKCFAPNK 65 (242)
T ss_dssp CEEEEECCCSSTTTSC-CHHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CEEEEEEecCCCCCCe-eHHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 38888876 442 334455666788777 99999999863
No 212
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.77 E-value=1.7e+02 Score=23.36 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.|||+++.+++. ...-+....+.|.+. |++|+++++.
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~a-g~~v~~vs~~ 38 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEE-GHEVYVASFQ 38 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHC-CCEEEEEECC
Confidence 578999999874 444566677888776 9999999975
No 213
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=22.74 E-value=1.3e+02 Score=27.70 Aligned_cols=29 Identities=3% Similarity=0.052 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEEeCCcc
Q 012513 267 LSQEQLNELALGLEMSGQRFLWVAKSPHE 295 (462)
Q Consensus 267 ~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 295 (462)
.+.+..+.+.+++.....+.||...++..
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFN 90 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchh
Confidence 44566888999999888899998877543
No 214
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=22.68 E-value=4.3e+02 Score=23.95 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=33.0
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDD 52 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~ 52 (462)
...|+++..++.|--.-...||..|..+ |.+|.++....+.
T Consensus 105 ~~vI~ivG~~G~GKTT~~~~LA~~l~~~-g~kVllid~D~~r 145 (320)
T 1zu4_A 105 LNIFMLVGVNGTGKTTSLAKMANYYAEL-GYKVLIAAADTFR 145 (320)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 3456666667899999999999999887 9999998866444
No 215
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=22.59 E-value=1.3e+02 Score=27.63 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTID 51 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~ 51 (462)
++|||+|+-.|. ......++|.++ ||+|..+.+...
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~~-~~~v~~Vvt~pd 41 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLSS-EHEIIAVYTQPE 41 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHTS-SSEEEEEECCCC
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHHC-CCcEEEEEcCCC
Confidence 478999997764 334556778787 999987776433
No 216
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=22.49 E-value=56 Score=30.11 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
.|+|.|+-.+..| ..+|..|.++ ||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~-G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHEN-GEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeC
Confidence 5899999887766 5788999887 999998864
No 217
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=22.35 E-value=1.9e+02 Score=23.87 Aligned_cols=40 Identities=10% Similarity=-0.025 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 9 IPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 9 ~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
.++++|+++.+++.. ..-+....+.|.+. |++|+++++..
T Consensus 21 ~~~~kV~ill~~g~~-~~e~~~~~~~l~~a-g~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFE-DSEFTSPADEFRKA-GHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBC-THHHHHHHHHHHHT-TCEEEEEESST
T ss_pred ccCCEEEEEECCCCC-HHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 446789999998755 34456677788776 99999999763
No 218
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=22.13 E-value=85 Score=28.12 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=33.0
Q ss_pred CCcEEEEEcCC---CcCCHHHHHHHHHHHHhcCCCEEEEEeCCCC
Q 012513 10 PRAHVAMVPTP---GMGHLIPLAQLAKRLVRQHNFLVSIFIPTID 51 (462)
Q Consensus 10 ~~~~ill~~~p---~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~ 51 (462)
..|+.+|++.+ +.|-=.-...|+..|.+| |++||..=...+
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~-G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSC-GLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHT-TCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHC-CCcceeeecccc
Confidence 36899999986 556667788999999998 999999875443
No 219
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=22.11 E-value=1.2e+02 Score=23.36 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=24.5
Q ss_pred EEEcCCCcC--CHHHHHHHHHHHHhcCCCEE-EEEeCC
Q 012513 15 AMVPTPGMG--HLIPLAQLAKRLVRQHNFLV-SIFIPT 49 (462)
Q Consensus 15 ll~~~p~~G--Hv~P~l~La~~L~~r~GH~V-t~~~~~ 49 (462)
++++.+-+| ....-+.+|..+.+. ||+| +++-..
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~-g~~v~~vff~~ 41 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEK-GHEIFRVFFYH 41 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHT-TCEEEEEEECG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhc-CCeeCEEEEec
Confidence 334444444 456778999999998 9999 887754
No 220
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=22.03 E-value=92 Score=26.80 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=25.1
Q ss_pred EEEEEcCCCcCCHHH----HHHHHHHHHhcCCCEEEEEeCC
Q 012513 13 HVAMVPTPGMGHLIP----LAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 13 ~ill~~~p~~GHv~P----~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.|+++.=--.|.++| ++..|++|+++.|-+|+.++..
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G 45 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAG 45 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 466666545566655 5788899977557777776653
No 221
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.04 E-value=1.9e+02 Score=26.42 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhc-cc
Q 012513 265 GTLSQEQLNELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLR-HG 343 (462)
Q Consensus 265 ~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~-~~ 343 (462)
...+.+..+.+.+++.....+.||.+.++.. . ..+.++++.+.+-. +|
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg---------------a----------------~rlLp~LD~~~i~~a~P 110 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYG---------------C----------------GQLLPGLDWGRLQAASP 110 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSC---------------G----------------GGGTTTCCHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcC---------------H----------------HHHhhccchhhhhccCC
Confidence 3445666888999998888899998887643 1 11334444454444 55
Q ss_pred cccccccccCchhHHHHHH-hCCceeeccc
Q 012513 344 STGGFLSHCGWNSILESIV-HGVPIIAWPL 372 (462)
Q Consensus 344 ~~~~~I~HGG~~t~~eal~-~GvP~v~~P~ 372 (462)
. +||-+.-.-.++-+++ .|++.+-=|+
T Consensus 111 K--~~iGySDiTaL~~al~~~G~~t~hGp~ 138 (311)
T 1zl0_A 111 R--PLIGFSDISVLLSAFHRHGLPAIHGPV 138 (311)
T ss_dssp C--CEEECGGGHHHHHHHHHTTCCEEECCC
T ss_pred C--EEEEEchhHHHHHHHHHcCCcEEECHh
Confidence 5 5666666555555554 2555555553
No 222
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.01 E-value=93 Score=27.46 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|++.- + |.+- ..|+++|.++ ||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~-g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQ-GWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGG-TCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHC-CCEEEEEEcC
Confidence 46776663 5 7664 4688999888 9999998743
No 223
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.84 E-value=2.6e+02 Score=25.55 Aligned_cols=114 Identities=16% Similarity=0.050 Sum_probs=63.8
Q ss_pred HHHHHHHhCCCceEEEEeCCcccccccccccccCCCCCCCCCChhHHHhhCCCceEeccCcchhhhhccccccccccccC
Q 012513 274 ELALGLEMSGQRFLWVAKSPHEEAANATYFSVQSMKDPLDFLPKGFLDRTKGVGLVVPSWSPQVQVLRHGSTGGFLSHCG 353 (462)
Q Consensus 274 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HGG 353 (462)
++++.++..+..++++++.... +|+.+.+..+...+- =|++ +.=-+-|
T Consensus 71 ~~~~~l~~~~~Dliv~~~~~~i-------------------lp~~il~~~~~g~iN-----------iHpS--lLP~yRG 118 (314)
T 3tqq_A 71 VEQEKLIAMNADVMVVVAYGLI-------------------LPKKALNAFRLGCVN-----------VHAS--LLPRWRG 118 (314)
T ss_dssp HHHHHHHTTCCSEEEEESCCSC-------------------CCHHHHTSSTTCEEE-----------EESS--CTTTTBS
T ss_pred HHHHHHHhcCCCEEEEcCcccc-------------------cCHHHHhhCcCCEEE-----------ecCc--cccCCCC
Confidence 4567777778888887776433 676655433222221 2555 4555669
Q ss_pred chhHHHHHHhCCceeeccccc--chhhhhHHhhcccceeEEeeecCCcccCHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012513 354 WNSILESIVHGVPIIAWPLYS--EQKMNAVLLTDDLKVSFRVKVNENGLVGREDIANYAKGLIQGEEGKLLRKKMRALK 430 (462)
Q Consensus 354 ~~t~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~g~G~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 430 (462)
...+..|+.+|....++-++. +..+.+.-+.+ . -+.+... -|.++|.+.+.++-.. -+.+....+.
T Consensus 119 ~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q-~--~~~I~~~----dt~~~L~~rl~~~~~~----ll~~~l~~l~ 186 (314)
T 3tqq_A 119 AAPIQRAILAGDRETGISIMQMNEGLDTGDVLAK-S--ACVISSE----DTAADLHDRLSLIGAD----LLLESLAKLE 186 (314)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred ccHHHHHHHcCCCeeEEEEEeeecCCCCCCEEEE-E--EEeeCCC----CCHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999999999999987776543 22322222222 1 1122222 4677777766554321 4444444443
No 224
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=20.65 E-value=4.9e+02 Score=24.14 Aligned_cols=40 Identities=5% Similarity=-0.083 Sum_probs=32.4
Q ss_pred EEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCCCCCC
Q 012513 13 HVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPTIDDG 53 (462)
Q Consensus 13 ~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 53 (462)
-++++-.|+.|=-.=.+.++..++.. |..|.|+..+....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEecccccc
Confidence 46666778889999999999999877 99999998875443
No 225
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=20.62 E-value=76 Score=26.20 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=25.0
Q ss_pred EEEEEcCCCcCCHHH-HHHHHHHHHhcCCCEEEEEeCC
Q 012513 13 HVAMVPTPGMGHLIP-LAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 13 ~ill~~~p~~GHv~P-~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
++++++..+ . || .+.+|++++++ ||.|..+|+.
T Consensus 80 ~vii~S~Sg--~-n~~~ie~A~~ake~-G~~vIaITs~ 113 (170)
T 3jx9_A 80 RVLIFTPDT--E-RSDLLASLARYDAW-HTPYSIITLG 113 (170)
T ss_dssp EEEEEESCS--C-CHHHHHHHHHHHHH-TCCEEEEESS
T ss_pred EEEEEeCCC--C-CHHHHHHHHHHHHC-CCcEEEEeCc
Confidence 455555443 2 44 89999999998 9999999993
No 226
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=20.60 E-value=41 Score=31.00 Aligned_cols=46 Identities=13% Similarity=-0.002 Sum_probs=27.6
Q ss_pred chhhcccCCCCCCeEEEEEeCCC---CCCCHHHHHHHHHHHHhCCCceEEEE
Q 012513 242 PACLKWLDEQPSESVLFVCFGSG---GTLSQEQLNELALGLEMSGQRFLWVA 290 (462)
Q Consensus 242 ~~~~~wl~~~~~~~~v~vs~Gs~---~~~~~~~~~~i~~al~~~~~~~i~~~ 290 (462)
+++..+++..+ ++-|.+++. ...+.+.+..+++.+++.+..+++=.
T Consensus 127 ~el~~~~~~~g---~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~ 175 (336)
T 2wm1_A 127 KEMERCVKELG---FPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHP 175 (336)
T ss_dssp HHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHccC---CeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECC
Confidence 55666664433 233334442 23445678899999999988865533
No 227
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=20.58 E-value=51 Score=30.91 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
+|+|.++-.+..| ..+|..|+++ ||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~-G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARK-GQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTT-TCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHC-CCeEEEEeCC
Confidence 5799999887766 4689999887 9999998753
No 228
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=20.58 E-value=1.4e+02 Score=25.87 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
+.++++++.++.| + =.++|+.|+++ |++|.++.-
T Consensus 11 ~~k~vlVTGas~g-I--G~aia~~l~~~-G~~V~~~~r 44 (252)
T 3f1l_A 11 NDRIILVTGASDG-I--GREAAMTYARY-GATVILLGR 44 (252)
T ss_dssp TTCEEEEESTTSH-H--HHHHHHHHHHT-TCEEEEEES
T ss_pred CCCEEEEeCCCCh-H--HHHHHHHHHHC-CCEEEEEeC
Confidence 3468888887643 3 35789999887 999988763
No 229
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.54 E-value=81 Score=23.18 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCcCCHHHHHHHHHHHHhcCC-CEEEEEeC
Q 012513 11 RAHVAMVPTPGMGHLIPLAQLAKRLVRQHN-FLVSIFIP 48 (462)
Q Consensus 11 ~~~ill~~~p~~GHv~P~l~La~~L~~r~G-H~Vt~~~~ 48 (462)
+++|+++-. |.+- ..+++.|.++ | |+|+++..
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~-g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTS-SNYSVTVADH 37 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHC-SSEEEEEEES
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhC-CCceEEEEeC
Confidence 467877743 4432 4678899887 9 99988774
No 230
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=20.46 E-value=84 Score=28.47 Aligned_cols=30 Identities=13% Similarity=0.354 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEe
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFI 47 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~ 47 (462)
.||.|+-.+..|. .+|+.|.++ ||+|+++-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~-G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEA-GYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHT-TCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHC-CCeEEEEe
Confidence 3799999988884 689999887 99999864
No 231
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=20.45 E-value=95 Score=26.93 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=30.1
Q ss_pred cEEEEEcC--CCcCCHHHHHHHHHHHHhcCCCEEEEEeCCC
Q 012513 12 AHVAMVPT--PGMGHLIPLAQLAKRLVRQHNFLVSIFIPTI 50 (462)
Q Consensus 12 ~~ill~~~--p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~~ 50 (462)
++++.+.. ++.|--.-...||..|+++ |++|.++-...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQK-GKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 34555543 6888899999999999987 99999987654
No 232
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=20.37 E-value=3.9e+02 Score=23.33 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=25.8
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
.++++++.++.| + =.++|+.|+++ |++|.++.-.
T Consensus 33 gk~~lVTGas~G-I--G~aia~~la~~-G~~V~~~~r~ 66 (275)
T 4imr_A 33 GRTALVTGSSRG-I--GAAIAEGLAGA-GAHVILHGVK 66 (275)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHC-CCEEEEEcCC
Confidence 368888887743 2 36789999988 9999887653
No 233
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=20.34 E-value=1.7e+02 Score=25.65 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCc----------CCH-HHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 11 RAHVAMVPTPGM----------GHL-IPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 11 ~~~ill~~~p~~----------GHv-~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|++|+++..... |-. .=++.--..|.+. |++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKH-GFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 457888777532 222 3466777888776 9999999975
No 234
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=20.13 E-value=79 Score=26.79 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeC
Q 012513 10 PRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIP 48 (462)
Q Consensus 10 ~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~ 48 (462)
.+|+|.++-.+..| ..+|+.|.++ ||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~-g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIA-GHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHC-CCEEEEEcC
Confidence 36789998766555 5678899887 999998753
No 235
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.13 E-value=1e+02 Score=28.44 Aligned_cols=41 Identities=7% Similarity=0.045 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 8 QIPRAHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 8 ~~~~~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|.++++++++..|..|.-.-...+.+.|.++ |+++.+..+.
T Consensus 26 m~~~~~~~vi~Np~sg~~~~~~~i~~~l~~~-g~~~~~~~t~ 66 (332)
T 2bon_A 26 MAEFPASLLILNGKSTDNLPLREAIMLLREE-GMTIHVRVTW 66 (332)
T ss_dssp ----CCEEEEECSSSTTCHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred hhhcceEEEEECCCCCCCchHHHHHHHHHHc-CCcEEEEEec
Confidence 4434578888888777655566788888776 9999887665
No 236
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=20.11 E-value=32 Score=29.48 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=23.5
Q ss_pred cEEEEEcCCCcCCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 012513 12 AHVAMVPTPGMGHLIPLAQLAKRLVRQHNFLVSIFIPT 49 (462)
Q Consensus 12 ~~ill~~~p~~GHv~P~l~La~~L~~r~GH~Vt~~~~~ 49 (462)
|+|+++-. |.+ -..+|+.|.++ ||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~-g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSR-KYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHT-TCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhC-CCeEEEEECC
Confidence 56777754 332 45789999887 9999998853
No 237
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=20.03 E-value=1.2e+02 Score=24.64 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=21.9
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCC
Q 012513 256 VLFVCFGSGGTLSQEQLNELALGLEMSGQ 284 (462)
Q Consensus 256 ~v~vs~Gs~~~~~~~~~~~i~~al~~~~~ 284 (462)
+.|+++||....+...++..+++|.....
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCC
Confidence 57999999765566678888888877543
Done!