Query 012515
Match_columns 462
No_of_seqs 365 out of 3102
Neff 9.7
Searched_HMMs 13730
Date Mon Mar 25 10:56:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012515.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012515hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.9 2E-22 1.4E-26 192.9 25.3 256 189-458 51-318 (344)
2 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.9 8.2E-23 6E-27 195.6 22.3 252 188-459 22-290 (344)
3 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 3.9E-22 2.8E-26 197.6 23.3 103 353-459 312-414 (460)
4 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 3.6E-19 2.6E-23 175.9 21.7 243 197-458 198-442 (460)
5 d2astb2 c.10.1.3 (B:2136-2419) 99.8 9.1E-18 6.6E-22 155.4 17.5 212 195-458 44-262 (284)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 2.9E-19 2.1E-23 168.2 -2.7 205 176-426 52-281 (313)
7 d2astb2 c.10.1.3 (B:2136-2419) 99.7 2.9E-16 2.1E-20 145.1 16.7 190 224-458 45-240 (284)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.4E-17 1E-21 152.7 4.0 179 197-427 31-209 (266)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 5.6E-17 4.1E-21 150.1 5.5 206 197-455 32-238 (284)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.6 1.4E-16 1.1E-20 145.8 4.4 178 225-455 31-208 (266)
11 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 4.1E-18 3E-22 160.2 -7.3 205 175-424 77-302 (313)
12 d1xkua_ c.10.2.7 (A:) Decorin 99.6 4.4E-16 3.2E-20 145.5 5.6 233 175-455 32-285 (305)
13 d1pgva_ c.10.1.1 (A:) Tropomod 99.6 9E-15 6.5E-19 123.5 12.7 133 280-424 6-142 (167)
14 d2omza2 c.10.2.1 (A:33-416) In 99.5 3.4E-14 2.4E-18 136.6 14.2 148 257-457 219-366 (384)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 2.5E-14 1.8E-18 127.4 11.1 188 195-451 39-226 (227)
16 d1xkua_ c.10.2.7 (A:) Decorin 99.5 3.5E-15 2.6E-19 139.3 5.6 212 175-427 56-286 (305)
17 d1pgva_ c.10.1.1 (A:) Tropomod 99.5 1.1E-13 8.1E-18 116.7 14.5 137 306-454 3-143 (167)
18 d1io0a_ c.10.1.1 (A:) Tropomod 99.5 1.9E-13 1.4E-17 115.2 15.7 134 279-424 7-143 (166)
19 d2omza2 c.10.2.1 (A:33-416) In 99.5 3.8E-14 2.8E-18 136.2 12.3 193 191-452 191-383 (384)
20 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 4.1E-15 3E-19 137.4 4.9 206 174-427 32-239 (284)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 3.7E-14 2.7E-18 124.6 10.9 143 256-451 67-209 (210)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.5 6.8E-14 5E-18 121.8 10.7 126 256-427 61-186 (199)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 8.4E-14 6.1E-18 122.3 11.3 165 196-422 45-209 (210)
24 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 3.1E-13 2.2E-17 120.2 13.0 185 175-422 42-226 (227)
25 d2omxa2 c.10.2.1 (A:37-235) In 99.4 1.7E-13 1.3E-17 119.2 10.6 148 196-395 39-186 (199)
26 d1io0a_ c.10.1.1 (A:) Tropomod 99.3 1.9E-11 1.4E-15 102.6 15.5 134 217-394 9-145 (166)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.1E-12 7.7E-17 104.6 5.7 85 317-426 19-103 (124)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.6E-12 1.2E-16 108.7 5.6 129 287-448 16-145 (162)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.2 3.3E-12 2.4E-16 101.6 5.2 104 260-395 1-104 (124)
30 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 2.9E-12 2.1E-16 110.5 4.2 88 286-393 51-138 (192)
31 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 2.7E-12 2E-16 110.8 3.4 132 258-427 9-140 (192)
32 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 6E-12 4.3E-16 105.2 5.3 134 256-427 17-151 (162)
33 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 2.4E-13 1.7E-17 122.1 -7.5 203 197-451 29-234 (242)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 5.3E-12 3.8E-16 109.3 -0.9 140 281-455 40-185 (198)
35 d1jl5a_ c.10.2.6 (A:) Leucine 99.0 4E-10 2.9E-14 106.0 9.9 56 380-456 283-338 (353)
36 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.9 9E-11 6.6E-15 104.8 0.3 182 225-456 29-215 (242)
37 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 4.7E-11 3.4E-15 103.1 -3.7 130 290-457 24-155 (198)
38 d2ifga3 c.10.2.7 (A:36-191) Hi 98.7 3.7E-09 2.7E-13 87.2 5.3 108 289-426 8-116 (156)
39 d2ifga3 c.10.2.7 (A:36-191) Hi 98.6 2.3E-08 1.7E-12 82.3 5.6 108 257-394 8-116 (156)
40 d1jl5a_ c.10.2.6 (A:) Leucine 98.3 3.9E-07 2.8E-11 84.8 7.6 139 225-427 38-176 (353)
41 d1koha1 c.10.2.3 (A:201-362) m 98.3 4.2E-07 3.1E-11 75.0 6.8 16 317-332 64-79 (162)
42 d1koha1 c.10.2.3 (A:201-362) m 98.3 4.7E-08 3.5E-12 80.9 0.0 94 351-457 63-159 (162)
43 d2ovrb1 a.158.1.1 (B:2263-2364 84.1 0.78 5.7E-05 32.6 5.3 71 25-113 15-95 (102)
44 d1fs1a1 a.158.1.1 (A:109-149) 55.3 4.5 0.00033 23.0 2.7 24 29-52 1-24 (41)
45 d1lm8v_ b.3.3.1 (V:) VHL {Huma 40.5 12 0.00087 28.2 3.7 36 3-41 95-130 (150)
46 d2izva1 a.271.1.1 (A:386-429) 35.7 10 0.00075 21.9 2.0 25 4-33 1-25 (44)
47 d2c9wa1 a.271.1.1 (A:149-198) 32.2 21 0.0015 21.2 3.1 14 5-18 13-26 (50)
No 1
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.90 E-value=2e-22 Score=192.91 Aligned_cols=256 Identities=17% Similarity=0.142 Sum_probs=200.0
Q ss_pred hhhhhhcCCCcCEEEeccCCC-------hHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccE
Q 012515 189 ETCQLLRESKLQSLVLRWIRF-------EEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIEN 261 (462)
Q Consensus 189 ~~~~l~~~~~L~~L~L~~~~~-------~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~ 261 (462)
+...+...++|+.++++++.. ......++..+. .+++|++|+|++|.+++.+...+...+.. +++|++
T Consensus 51 l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~-~~~~L~~L~L~~n~i~~~~~~~l~~~l~~----~~~L~~ 125 (344)
T d2ca6a1 51 LSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALL-KCPKLHTVRLSDNAFGPTAQEPLIDFLSK----HTPLEH 125 (344)
T ss_dssp HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHT-TCTTCCEEECCSCCCCTTTHHHHHHHHHH----CTTCCE
T ss_pred HHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHh-hCCCcccccccccccccccccchhhhhcc----cccchh
Confidence 344556778999999987642 223444444444 47899999999999999998888887776 688999
Q ss_pred EecCCCCCCCCCCchhHHHHHH-----hhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccc
Q 012515 262 LSIDISSFIENCPSSVVVELVS-----FLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSK 336 (462)
Q Consensus 262 L~l~~~~~~~~~~~~~~~~l~~-----~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 336 (462)
|++++|.+...+...+...+.. .....+.|+.+++++|.+++.+...++.++.. .+.|+.|+|++|.+++...
T Consensus 126 L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~-~~~L~~L~L~~n~i~~~g~- 203 (344)
T d2ca6a1 126 LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS-HRLLHTVKMVQNGIRPEGI- 203 (344)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH-CTTCCEEECCSSCCCHHHH-
T ss_pred eecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhh-hhhhccccccccccccccc-
Confidence 9999998866333222222211 12457799999999999999999999887755 4899999999999884211
Q ss_pred cCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCcc
Q 012515 337 YDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLV 416 (462)
Q Consensus 337 ~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~ 416 (462)
...+...+. .+++|+.|+|++|.+++.|+..+..++..+++|++|+|++|.|++.|+..++.++.. .....|+
T Consensus 204 --~~~l~~~l~---~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~--~~~~~L~ 276 (344)
T d2ca6a1 204 --EHLLLEGLA---YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK--LENIGLQ 276 (344)
T ss_dssp --HHHHHTTGG---GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT--CSSCCCC
T ss_pred --ccchhhhhc---chhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhh--ccCCCCC
Confidence 111223333 558899999999999999999999999999999999999999999999999875522 2347899
Q ss_pred EEEccCCCCChhhHHHHHHHHhcCCCCCcEEEccCCCCCCcc
Q 012515 417 ELYLENCELSGRGVSQLLDTLSTLRRPPTSLSIADNNLGRFC 458 (462)
Q Consensus 417 ~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l~~~~ 458 (462)
+|++++|+|+..|+..+..++..-.+.|++|++++|+|+++.
T Consensus 277 ~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~~ 318 (344)
T d2ca6a1 277 TLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 318 (344)
T ss_dssp EEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred EEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCcc
Confidence 999999999999999999999742467999999999997754
No 2
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.90 E-value=8.2e-23 Score=195.58 Aligned_cols=252 Identities=21% Similarity=0.231 Sum_probs=203.2
Q ss_pred HhhhhhhcCCCcCEEEeccCCChH-HHHHHHHHHHhcCCCccEEEccCCCCC------hhHHHHHHHHHhcccccCCCcc
Q 012515 188 EETCQLLRESKLQSLVLRWIRFEE-HVQALCKLLIQNSETLASLEFLHCKLS------PSFVEGICRSLCSKRKRIHKIE 260 (462)
Q Consensus 188 ~~~~~l~~~~~L~~L~L~~~~~~~-~~~~l~~~l~~~~~~L~~L~L~~~~l~------~~~~~~l~~~l~~~~~~~~~L~ 260 (462)
.+...+.....+++|+|++|.+.. ++..++.. ....++|+.++++++... ..+...++..+.. +++|+
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~-l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~----~~~L~ 96 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSEN-IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLK----CPKLH 96 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHT-TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTT----CTTCC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHH-HHhCCCCCEEECCCCcccccccccchHHHHHHHHHhh----CCCcc
Confidence 345667778999999999998644 45555444 345789999999987543 2344455665554 78899
Q ss_pred EEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHh--------hCCCCccEEEecCCCCCC
Q 012515 261 NLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLL--------EASSSLSILDLSGNSIGG 332 (462)
Q Consensus 261 ~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~--------~~~~~L~~L~Ls~n~l~~ 332 (462)
+|++++|.+...+. ..+...+..+++|++|++++|.+++.+...++.++. ...+.|+.+++++|.+++
T Consensus 97 ~L~L~~n~i~~~~~----~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 97 TVRLSDNAFGPTAQ----EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp EEECCSCCCCTTTH----HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred cccccccccccccc----cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 99999999988544 367788888999999999999999888887776653 346789999999999883
Q ss_pred cccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHH-HHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCC
Q 012515 333 WLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARD-LGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASER 411 (462)
Q Consensus 333 ~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~ 411 (462)
.+...+...+. .+.+|++|+|++|+|+++|+.. +..++..+++|+.|++++|.+++.|+..+.. .+..
T Consensus 173 ----~~~~~l~~~l~---~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~----~l~~ 241 (344)
T d2ca6a1 173 ----GSMKEWAKTFQ---SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI----ALKS 241 (344)
T ss_dssp ----GGHHHHHHHHH---HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH----HGGG
T ss_pred ----cccccccchhh---hhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc----cccc
Confidence 55556666776 4478999999999999998765 5667899999999999999999999888874 5667
Q ss_pred CCCccEEEccCCCCChhhHHHHHHHHhcC-CCCCcEEEccCCCCCCccc
Q 012515 412 CNPLVELYLENCELSGRGVSQLLDTLSTL-RRPPTSLSIADNNLGRFCA 459 (462)
Q Consensus 412 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l-~~~L~~L~Ls~N~l~~~~~ 459 (462)
+++|++|++++|.|++.|+..+++++... +.+|++||+++|+|++++.
T Consensus 242 ~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~ 290 (344)
T d2ca6a1 242 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 290 (344)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred cccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHH
Confidence 79999999999999999999999999753 3569999999999987653
No 3
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.9e-22 Score=197.58 Aligned_cols=103 Identities=27% Similarity=0.341 Sum_probs=89.5
Q ss_pred CCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHH
Q 012515 353 QSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQ 432 (462)
Q Consensus 353 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~ 432 (462)
.+|+.+++++|.+++.++..+...+..+++|++|+|++|.|+++|+..++.. .....+.|++|+|++|+|++.|+.+
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~---l~~~~~~L~~L~Ls~n~i~~~~~~~ 388 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQG---LGQPGSVLRVLWLADCDVSDSSCSS 388 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHH---HTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhh---hhcccCCCCEEECCCCCCChHHHHH
Confidence 6789999999999999998898888899999999999999999998888753 2334678999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEccCCCCCCccc
Q 012515 433 LLDTLSTLRRPPTSLSIADNNLGRFCA 459 (462)
Q Consensus 433 l~~~l~~l~~~L~~L~Ls~N~l~~~~~ 459 (462)
+++.+.. +++|++||+++|+|+++++
T Consensus 389 l~~~l~~-~~~L~~L~Ls~N~i~~~g~ 414 (460)
T d1z7xw1 389 LAATLLA-NHSLRELDLSNNCLGDAGI 414 (460)
T ss_dssp HHHHHHH-CCCCCEEECCSSSCCHHHH
T ss_pred HHHHHhc-CCCCCEEECCCCcCCHHHH
Confidence 9999988 6779999999999988764
No 4
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.6e-19 Score=175.91 Aligned_cols=243 Identities=22% Similarity=0.204 Sum_probs=147.1
Q ss_pred CCcCEEEeccCCChHH-HHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCc
Q 012515 197 SKLQSLVLRWIRFEEH-VQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPS 275 (462)
Q Consensus 197 ~~L~~L~L~~~~~~~~-~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~ 275 (462)
.....+++..+..... .......+ ...+.++.+++++|.+.+............. ...++.+++++|.+..
T Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~l-~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~---~~~l~~l~l~~n~i~~---- 269 (460)
T d1z7xw1 198 CQLEALKLESCGVTSDNCRDLCGIV-ASKASLRELALGSNKLGDVGMAELCPGLLHP---SSRLRTLWIWECGITA---- 269 (460)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHH-HHCTTCCEEECCSSBCHHHHHHHHHHHHTST---TCCCCEEECTTSCCCH----
T ss_pred ccccccccccccccchhhhcccccc-cccccccccchhhccccccccchhhcccccc---cccccccccccccccc----
Confidence 3445566655543222 22222222 2356667777776666555444333332222 4567777777776654
Q ss_pred hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCc
Q 012515 276 SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSL 355 (462)
Q Consensus 276 ~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L 355 (462)
.........+..++.++.+++++|.+++.+...++..+....+.|+.+++++|.+++ .+...+...+. ...+|
T Consensus 270 ~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~----~~~~~l~~~~~---~~~~L 342 (460)
T d1z7xw1 270 KGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA----ACCSHFSSVLA---QNRFL 342 (460)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG----GGHHHHHHHHH---HCSSC
T ss_pred cccccccccccccccccccccccccccccccchhhccccccccccccccccccchhh----hhhhhcccccc---cccch
Confidence 112234445555667777777777777777777766665555667777777777663 33344444444 33567
Q ss_pred cEEEccCCCCCcchHHHHHHHhhc-CCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHH
Q 012515 356 RLLNLRGNNLCKADARDLGSALVH-IPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLL 434 (462)
Q Consensus 356 ~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~ 434 (462)
++|+|++|+|+++|+..++.++.+ ++.|++|+|++|.|++.|+.++.. .+..+++|++|++++|+|++.|+..+.
T Consensus 343 ~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~----~l~~~~~L~~L~Ls~N~i~~~g~~~l~ 418 (460)
T d1z7xw1 343 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA----TLLANHSLRELDLSNNCLGDAGILQLV 418 (460)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH----HHHHCCCCCEEECCSSSCCHHHHHHHH
T ss_pred hhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH----HHhcCCCCCEEECCCCcCCHHHHHHHH
Confidence 777777777777777777776653 556777777777777777666653 344456777777777777777777777
Q ss_pred HHHhcCCCCCcEEEccCCCCCCcc
Q 012515 435 DTLSTLRRPPTSLSIADNNLGRFC 458 (462)
Q Consensus 435 ~~l~~l~~~L~~L~Ls~N~l~~~~ 458 (462)
+++......|+.|++++|.+.+++
T Consensus 419 ~~l~~~~~~L~~l~l~~~~~~~~~ 442 (460)
T d1z7xw1 419 ESVRQPGCLLEQLVLYDIYWSEEM 442 (460)
T ss_dssp HHHTSTTCCCCEEECTTCCCCHHH
T ss_pred HHHHhCCCccCEEECCCCCCCHHH
Confidence 777653335777777777776543
No 5
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=9.1e-18 Score=155.40 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=156.1
Q ss_pred cCCCcCEEEeccCCChHH-HHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCC-CCCCC
Q 012515 195 RESKLQSLVLRWIRFEEH-VQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDIS-SFIEN 272 (462)
Q Consensus 195 ~~~~L~~L~L~~~~~~~~-~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~-~~~~~ 272 (462)
...+|++|+++++.+... +.. +...+++|++|+|++|.+++.....+.. +++|++|++++| .+++
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~----l~~~c~~L~~L~L~~~~l~~~~~~~l~~--------~~~L~~L~Ls~c~~itd- 110 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHG----ILSQCSKLQNLSLEGLRLSDPIVNTLAK--------NSNLVRLNLSGCSGFSE- 110 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHH----HHTTBCCCSEEECTTCBCCHHHHHHHTT--------CTTCSEEECTTCBSCCH-
T ss_pred cCCCCCEEECCCCccCHHHHHH----HHHhCCCcccccccccCCCcHHHHHHhc--------CCCCcCccccccccccc-
Confidence 345799999998876543 333 3667899999999999999887776643 789999999996 4554
Q ss_pred CCchhHHHHHHhhcCCCCCCEEecCCC-CCChhhHHHHHHHHhhCCCCccEEEecCCC--CCCcccccCcccHHHhhhCC
Q 012515 273 CPSSVVVELVSFLSSGRSLCSLKLRHC-HLDRDFGRMVFSSLLEASSSLSILDLSGNS--IGGWLSKYDRSGPLFSLGAG 349 (462)
Q Consensus 273 ~~~~~~~~l~~~l~~l~~L~~L~Ls~n-~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~--l~~~~~~~~~~~l~~~l~~~ 349 (462)
..+......+++|++|++++| .+++.+...... ...+.|++|+++++. +++ +.+.....
T Consensus 111 ------~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~i~~-------~~l~~l~~-- 172 (284)
T d2astb2 111 ------FALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA---HVSETITQLNLSGYRKNLQK-------SDLSTLVR-- 172 (284)
T ss_dssp ------HHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH---HSCTTCCEEECCSCGGGSCH-------HHHHHHHH--
T ss_pred ------cccchhhHHHHhccccccccccccccccchhhhc---ccccccchhhhccccccccc-------cccccccc--
Confidence 345566677899999999997 677766655433 345789999999863 443 22333334
Q ss_pred CCCCCccEEEccCC-CCCcchHHHHHHHhhcCCCCCEEeCCCC-CCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCCh
Q 012515 350 KSLQSLRLLNLRGN-NLCKADARDLGSALVHIPNLEILDISDN-TIEDDGIRSLIPYFVQASERCNPLVELYLENCELSG 427 (462)
Q Consensus 350 ~~l~~L~~L~L~~n-~l~~~~~~~l~~~l~~~~~L~~L~Ls~N-~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~ 427 (462)
++++|++|++++| .++++++ ..+.++++|++|+++++ .|+++|+..+ ..+++|+.|++++| +++
T Consensus 173 -~~~~L~~L~L~~~~~itd~~~----~~l~~~~~L~~L~L~~C~~i~~~~l~~L--------~~~~~L~~L~l~~~-~~d 238 (284)
T d2astb2 173 -RCPNLVHLDLSDSVMLKNDCF----QEFFQLNYLQHLSLSRCYDIIPETLLEL--------GEIPTLKTLQVFGI-VPD 238 (284)
T ss_dssp -HCTTCSEEECTTCTTCCGGGG----GGGGGCTTCCEEECTTCTTCCGGGGGGG--------GGCTTCCEEECTTS-SCT
T ss_pred -ccccccccccccccCCCchhh----hhhcccCcCCEEECCCCCCCChHHHHHH--------hcCCCCCEEeeeCC-CCH
Confidence 5689999999997 5888654 44678999999999995 5998775444 45689999999999 888
Q ss_pred hhHHHHHHHHhcCCCCCcEEEccCCCCCCcc
Q 012515 428 RGVSQLLDTLSTLRRPPTSLSIADNNLGRFC 458 (462)
Q Consensus 428 ~~~~~l~~~l~~l~~~L~~L~Ls~N~l~~~~ 458 (462)
.++..+.+.+.+ | .+..+++++..
T Consensus 239 ~~l~~l~~~lp~----L---~i~~~~ls~~~ 262 (284)
T d2astb2 239 GTLQLLKEALPH----L---QINCSHFTTIA 262 (284)
T ss_dssp TCHHHHHHHSTT----S---EESCCCSCCTT
T ss_pred HHHHHHHHhCcc----c---cccCccCCCCC
Confidence 888777765544 3 45667776543
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.69 E-value=2.9e-19 Score=168.22 Aligned_cols=205 Identities=17% Similarity=0.124 Sum_probs=121.6
Q ss_pred cceeeeccccch---HhhhhhhcCCCcCEEEecc-CCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhc
Q 012515 176 ARCLRLQNALCV---EETCQLLRESKLQSLVLRW-IRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCS 251 (462)
Q Consensus 176 ~~~l~l~~~~~~---~~~~~l~~~~~L~~L~L~~-~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~ 251 (462)
+..+++.++... .++..+.++++|++|+|++ |.+...++.. +.++++|++|+|++|.+....+..+..
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~----i~~L~~L~~L~Ls~N~l~~~~~~~~~~---- 123 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA----IAKLTQLHYLYITHTNVSGAIPDFLSQ---- 123 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG----GGGCTTCSEEEEEEECCEEECCGGGGG----
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc----cccccccchhhhccccccccccccccc----
Confidence 344455554433 3567788888999999986 5544322211 356888999999988876543333222
Q ss_pred ccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCC-ccEEEecCCCC
Q 012515 252 KRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSS-LSILDLSGNSI 330 (462)
Q Consensus 252 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~-L~~L~Ls~n~l 330 (462)
+.+|+.++++.|.+.. .++..+..++.|+++++++|.+.+..+..+. .+.. ++.+++++|++
T Consensus 124 ----~~~L~~l~l~~N~~~~--------~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~-----~l~~l~~~l~~~~n~l 186 (313)
T d1ogqa_ 124 ----IKTLVTLDFSYNALSG--------TLPPSISSLPNLVGITFDGNRISGAIPDSYG-----SFSKLFTSMTISRNRL 186 (313)
T ss_dssp ----CTTCCEEECCSSEEES--------CCCGGGGGCTTCCEEECCSSCCEEECCGGGG-----CCCTTCCEEECCSSEE
T ss_pred ----hhhhcccccccccccc--------cCchhhccCcccceeeccccccccccccccc-----cccccccccccccccc
Confidence 6778888888887766 4556677888888899988888765555432 2334 47888888887
Q ss_pred CCcccccCcccHHHhhhC--------------------CCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCC
Q 012515 331 GGWLSKYDRSGPLFSLGA--------------------GKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISD 390 (462)
Q Consensus 331 ~~~~~~~~~~~l~~~l~~--------------------~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 390 (462)
++..+ ..+.. ...+.+++.+++++|.++. .++.+..+++|+.|++++
T Consensus 187 ~~~~~--------~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~-----~~~~~~~~~~L~~L~Ls~ 253 (313)
T d1ogqa_ 187 TGKIP--------PTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF-----DLGKVGLSKNLNGLDLRN 253 (313)
T ss_dssp EEECC--------GGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC-----BGGGCCCCTTCCEEECCS
T ss_pred ccccc--------cccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccCcc
Confidence 75433 11221 1123445555555555543 123344455555555555
Q ss_pred CCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCC
Q 012515 391 NTIEDDGIRSLIPYFVQASERCNPLVELYLENCELS 426 (462)
Q Consensus 391 N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~ 426 (462)
|++++. +| ..+..+++|++|+|++|+|+
T Consensus 254 N~l~g~-----iP---~~l~~L~~L~~L~Ls~N~l~ 281 (313)
T d1ogqa_ 254 NRIYGT-----LP---QGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp SCCEEC-----CC---GGGGGCTTCCEEECCSSEEE
T ss_pred Ceeccc-----CC---hHHhCCCCCCEEECcCCccc
Confidence 555432 33 33444555555555555554
No 7
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.9e-16 Score=145.09 Aligned_cols=190 Identities=23% Similarity=0.285 Sum_probs=147.0
Q ss_pred CCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCC-CCC
Q 012515 224 SETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHC-HLD 302 (462)
Q Consensus 224 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n-~l~ 302 (462)
..+|++|++++|.+++.....+... +++|++|+++++.+.+ .....+..+++|++|++++| .++
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~-------c~~L~~L~L~~~~l~~--------~~~~~l~~~~~L~~L~Ls~c~~it 109 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQ-------CSKLQNLSLEGLRLSD--------PIVNTLAKNSNLVRLNLSGCSGFS 109 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTT-------BCCCSEEECTTCBCCH--------HHHHHHTTCTTCSEEECTTCBSCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHh-------CCCcccccccccCCCc--------HHHHHHhcCCCCcCcccccccccc
Confidence 4689999999999988777665442 7899999999998876 67777888999999999996 799
Q ss_pred hhhHHHHHHHHhhCCCCccEEEecCCC-CCCcccccCcccHHHhhhCCCCCCCccEEEccCC--CCCcchHHHHHHHhhc
Q 012515 303 RDFGRMVFSSLLEASSSLSILDLSGNS-IGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGN--NLCKADARDLGSALVH 379 (462)
Q Consensus 303 ~~~~~~l~~~l~~~~~~L~~L~Ls~n~-l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n--~l~~~~~~~l~~~l~~ 379 (462)
+.+...+++. +++|++|++++|. +++ +.+...+.. .++.|+.|++++| .+++.++.. ...+
T Consensus 110 d~~l~~l~~~----~~~L~~L~ls~c~~~~~-------~~~~~~~~~--~~~~L~~L~l~~~~~~i~~~~l~~---l~~~ 173 (284)
T d2astb2 110 EFALQTLLSS----CSRLDELNLSWCFDFTE-------KHVQVAVAH--VSETITQLNLSGYRKNLQKSDLST---LVRR 173 (284)
T ss_dssp HHHHHHHHHH----CTTCCEEECCCCTTCCH-------HHHHHHHHH--SCTTCCEEECCSCGGGSCHHHHHH---HHHH
T ss_pred ccccchhhHH----HHhcccccccccccccc-------ccchhhhcc--cccccchhhhcccccccccccccc---cccc
Confidence 8888887653 5899999999975 553 123333443 2378999999987 588876544 4567
Q ss_pred CCCCCEEeCCCCC-CCchhHHhHHHHHHhhcCCCCCccEEEccCC-CCChhhHHHHHHHHhcCCCCCcEEEccCCCCCCc
Q 012515 380 IPNLEILDISDNT-IEDDGIRSLIPYFVQASERCNPLVELYLENC-ELSGRGVSQLLDTLSTLRRPPTSLSIADNNLGRF 457 (462)
Q Consensus 380 ~~~L~~L~Ls~N~-l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n-~l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l~~~ 457 (462)
+++|++|++++|. +++.++..+ ..+++|++|++++| .+++.+... +.. .++|++|+++++ +++.
T Consensus 174 ~~~L~~L~L~~~~~itd~~~~~l--------~~~~~L~~L~L~~C~~i~~~~l~~----L~~-~~~L~~L~l~~~-~~d~ 239 (284)
T d2astb2 174 CPNLVHLDLSDSVMLKNDCFQEF--------FQLNYLQHLSLSRCYDIIPETLLE----LGE-IPTLKTLQVFGI-VPDG 239 (284)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGG--------GGCTTCCEEECTTCTTCCGGGGGG----GGG-CTTCCEEECTTS-SCTT
T ss_pred cccccccccccccCCCchhhhhh--------cccCcCCEEECCCCCCCChHHHHH----Hhc-CCCCCEEeeeCC-CCHH
Confidence 8999999999875 888765444 45689999999997 688876544 445 456999999987 6654
Q ss_pred c
Q 012515 458 C 458 (462)
Q Consensus 458 ~ 458 (462)
+
T Consensus 240 ~ 240 (284)
T d2astb2 240 T 240 (284)
T ss_dssp C
T ss_pred H
Confidence 3
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.4e-17 Score=152.75 Aligned_cols=179 Identities=18% Similarity=0.113 Sum_probs=115.3
Q ss_pred CCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCch
Q 012515 197 SKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSS 276 (462)
Q Consensus 197 ~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~ 276 (462)
+++++|+|++|.+....... +.++++|++|+|++|.|+.... ...+++|++|++++|++..
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~----f~~l~~L~~L~L~~N~l~~l~~----------~~~l~~L~~L~Ls~N~l~~----- 91 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLAT----LMPYTRLTQLNLDRAELTKLQV----------DGTLPVLGTLDLSHNQLQS----- 91 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGG----GTTCTTCCEEECTTSCCCEEEC----------CSCCTTCCEEECCSSCCSS-----
T ss_pred cCCCEEECcCCcCCCcCHHH----hhcccccccccccccccccccc----------ccccccccccccccccccc-----
Confidence 46788888888765432221 3457788888888887763211 1126778888888887765
Q ss_pred hHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCcc
Q 012515 277 VVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLR 356 (462)
Q Consensus 277 ~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~ 356 (462)
....+..+++|+.|++++|.+....... ...+.++++|++++|.++...+ . .+..+..++
T Consensus 92 ----~~~~~~~l~~L~~L~l~~~~~~~~~~~~-----~~~l~~l~~L~l~~n~l~~l~~--------~---~~~~l~~l~ 151 (266)
T d1p9ag_ 92 ----LPLLGQTLPALTVLDVSFNRLTSLPLGA-----LRGLGELQELYLKGNELKTLPP--------G---LLTPTPKLE 151 (266)
T ss_dssp ----CCCCTTTCTTCCEEECCSSCCCCCCSST-----TTTCTTCCEEECTTSCCCCCCT--------T---TTTTCTTCC
T ss_pred ----cccccccccccccccccccccceeeccc-----cccccccccccccccccceecc--------c---cccccccch
Confidence 2334556777888888877766532222 2345777888888887765322 1 222456778
Q ss_pred EEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCCh
Q 012515 357 LLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSG 427 (462)
Q Consensus 357 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~ 427 (462)
.|++++|+++.. .+..+..+++|++|+|++|.|+. +| ..+..+++|+.|+|++|++.-
T Consensus 152 ~l~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~L~~------lp---~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 152 KLSLANNNLTEL----PAGLLNGLENLDTLLLQENSLYT------IP---KGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp EEECTTSCCSCC----CTTTTTTCTTCCEEECCSSCCCC------CC---TTTTTTCCCSEEECCSCCBCC
T ss_pred hccccccccccc----CccccccccccceeecccCCCcc------cC---hhHCCCCCCCEEEecCCCCCC
Confidence 888888877752 23346677788888888888775 55 445556778888888887653
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.6e-17 Score=150.14 Aligned_cols=206 Identities=20% Similarity=0.189 Sum_probs=119.5
Q ss_pred CCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCC-CCCCCCCCc
Q 012515 197 SKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDI-SSFIENCPS 275 (462)
Q Consensus 197 ~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~-~~~~~~~~~ 275 (462)
+.+++|+|++|.+....... +.++++|++|++++|.+.......+.. ...++++.... +.+..
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~----f~~l~~L~~L~ls~n~l~~i~~~~~~~--------~~~~~~l~~~~~~~~~~---- 95 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAAS----FRACRNLTILWLHSNVLARIDAAAFTG--------LALLEQLDLSDNAQLRS---- 95 (284)
T ss_dssp TTCSEEECTTSCCCEECTTT----TTTCTTCCEEECCSSCCCEECTTTTTT--------CTTCCEEECCSCTTCCC----
T ss_pred CCCCEEECcCCcCCCCCHHH----hhccccccccccccccccccccccccc--------ccccccccccccccccc----
Confidence 34677777777664432221 345677777777777665433222211 34555655543 33333
Q ss_pred hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCc
Q 012515 276 SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSL 355 (462)
Q Consensus 276 ~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L 355 (462)
.-...+.++++|++|++++|.+....... .....+|+.+++++|.+++..+ ..+ +.+.+|
T Consensus 96 ----l~~~~~~~l~~L~~L~l~~n~~~~~~~~~-----~~~~~~L~~l~l~~N~l~~i~~--------~~f---~~~~~L 155 (284)
T d1ozna_ 96 ----VDPATFHGLGRLHTLHLDRCGLQELGPGL-----FRGLAALQYLYLQDNALQALPD--------DTF---RDLGNL 155 (284)
T ss_dssp ----CCTTTTTTCTTCCEEECTTSCCCCCCTTT-----TTTCTTCCEEECCSSCCCCCCT--------TTT---TTCTTC
T ss_pred ----ccchhhcccccCCEEecCCcccccccccc-----cchhcccchhhhccccccccCh--------hHh---ccccch
Confidence 11334556677777777777665422221 2345667777777777765322 222 244667
Q ss_pred cEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHHH
Q 012515 356 RLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLD 435 (462)
Q Consensus 356 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~ 435 (462)
+.|++++|+++. ..+.++..+++|+.+++++|.+++- .| ..+..+++|+.|++++|+++.. ...
T Consensus 156 ~~L~l~~N~l~~----l~~~~f~~l~~L~~l~l~~N~l~~i-----~~---~~f~~l~~L~~L~l~~N~i~~~----~~~ 219 (284)
T d1ozna_ 156 THLFLHGNRISS----VPERAFRGLHSLDRLLLHQNRVAHV-----HP---HAFRDLGRLMTLYLFANNLSAL----PTE 219 (284)
T ss_dssp CEEECCSSCCCE----ECTTTTTTCTTCCEEECCSSCCCEE-----CT---TTTTTCTTCCEEECCSSCCSCC----CHH
T ss_pred hhcccccCcccc----cchhhhccccccchhhhhhcccccc-----Ch---hHhhhhhhcccccccccccccc----ccc
Confidence 777777777765 1234566677777777777777651 22 4566667777777777777664 234
Q ss_pred HHhcCCCCCcEEEccCCCCC
Q 012515 436 TLSTLRRPPTSLSIADNNLG 455 (462)
Q Consensus 436 ~l~~l~~~L~~L~Ls~N~l~ 455 (462)
.+.. ..+|++|++++|++.
T Consensus 220 ~~~~-~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 220 ALAP-LRALQYLRLNDNPWV 238 (284)
T ss_dssp HHTT-CTTCCEEECCSSCEE
T ss_pred cccc-ccccCEEEecCCCCC
Confidence 4555 345777777777665
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.4e-16 Score=145.83 Aligned_cols=178 Identities=20% Similarity=0.182 Sum_probs=110.6
Q ss_pred CCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChh
Q 012515 225 ETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRD 304 (462)
Q Consensus 225 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~ 304 (462)
+++++|+|++|.|+......+.. +++|++|++++|.++... .+..+++|++|+|++|++...
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~--------l~~L~~L~L~~N~l~~l~----------~~~~l~~L~~L~Ls~N~l~~~ 92 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMP--------YTRLTQLNLDRAELTKLQ----------VDGTLPVLGTLDLSHNQLQSL 92 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTT--------CTTCCEEECTTSCCCEEE----------CCSCCTTCCEEECCSSCCSSC
T ss_pred cCCCEEECcCCcCCCcCHHHhhc--------cccccccccccccccccc----------ccccccccccccccccccccc
Confidence 46777777777776433333322 667777777777776511 234567777777777777652
Q ss_pred hHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCC
Q 012515 305 FGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLE 384 (462)
Q Consensus 305 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 384 (462)
.. . ...+++|+.|++++|.+....+ ..+..+.++++|++++|.++.- -+..+..+++|+
T Consensus 93 ~~-~-----~~~l~~L~~L~l~~~~~~~~~~-----------~~~~~l~~l~~L~l~~n~l~~l----~~~~~~~l~~l~ 151 (266)
T d1p9ag_ 93 PL-L-----GQTLPALTVLDVSFNRLTSLPL-----------GALRGLGELQELYLKGNELKTL----PPGLLTPTPKLE 151 (266)
T ss_dssp CC-C-----TTTCTTCCEEECCSSCCCCCCS-----------STTTTCTTCCEEECTTSCCCCC----CTTTTTTCTTCC
T ss_pred cc-c-----cccccccccccccccccceeec-----------ccccccccccccccccccccee----ccccccccccch
Confidence 11 1 2345777777777777664222 1222456777777777777651 123455667777
Q ss_pred EEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHHHHHhcCCCCCcEEEccCCCCC
Q 012515 385 ILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLDTLSTLRRPPTSLSIADNNLG 455 (462)
Q Consensus 385 ~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l~ 455 (462)
.+++++|.|+. ++. ..+..+++|++|+|++|+|+. +++.+.. .++|+.|+|++|++.
T Consensus 152 ~l~l~~N~l~~------~~~--~~~~~l~~L~~L~Ls~N~L~~-----lp~~~~~-~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 152 KLSLANNNLTE------LPA--GLLNGLENLDTLLLQENSLYT-----IPKGFFG-SHLLPFAFLHGNPWL 208 (266)
T ss_dssp EEECTTSCCSC------CCT--TTTTTCTTCCEEECCSSCCCC-----CCTTTTT-TCCCSEEECCSCCBC
T ss_pred hcccccccccc------cCc--cccccccccceeecccCCCcc-----cChhHCC-CCCCCEEEecCCCCC
Confidence 77777777765 321 445666777777777777775 5555555 345777777777653
No 11
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.59 E-value=4.1e-18 Score=160.23 Aligned_cols=205 Identities=18% Similarity=0.204 Sum_probs=134.5
Q ss_pred ccceeeecc-ccch-HhhhhhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcc
Q 012515 175 YARCLRLQN-ALCV-EETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSK 252 (462)
Q Consensus 175 ~~~~l~l~~-~~~~-~~~~~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~ 252 (462)
.++.+++.+ +... .+|..+.++++|++|+|++|.+....... ...+.+|+.+++++|.+....+..+..
T Consensus 77 ~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~----~~~~~~L~~l~l~~N~~~~~~p~~l~~----- 147 (313)
T d1ogqa_ 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF----LSQIKTLVTLDFSYNALSGTLPPSISS----- 147 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG----GGGCTTCCEEECCSSEEESCCCGGGGG-----
T ss_pred cccccccccccccccccccccccccccchhhhcccccccccccc----ccchhhhcccccccccccccCchhhcc-----
Confidence 445566654 2332 46677888899999999988865543222 345778899998888665443333322
Q ss_pred cccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCC-CEEecCCCCCChhhHHHHHH------------------HH
Q 012515 253 RKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSL-CSLKLRHCHLDRDFGRMVFS------------------SL 313 (462)
Q Consensus 253 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L-~~L~Ls~n~l~~~~~~~l~~------------------~l 313 (462)
++.++.+++++|.+.. .++..+..+..+ +.+++++|++.+..+..+.. ..
T Consensus 148 ---l~~L~~l~l~~n~l~~--------~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~ 216 (313)
T d1ogqa_ 148 ---LPNLVGITFDGNRISG--------AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVL 216 (313)
T ss_dssp ---CTTCCEEECCSSCCEE--------ECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGG
T ss_pred ---Ccccceeecccccccc--------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6788888888888765 344555555544 67777777665433322210 01
Q ss_pred hhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCC
Q 012515 314 LEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTI 393 (462)
Q Consensus 314 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l 393 (462)
......++.+++++|.+.+. +..+..+++|+.|+|++|++++ .+|..+.++++|++|+|++|+|
T Consensus 217 ~~~~~~l~~l~~~~~~l~~~------------~~~~~~~~~L~~L~Ls~N~l~g----~iP~~l~~L~~L~~L~Ls~N~l 280 (313)
T d1ogqa_ 217 FGSDKNTQKIHLAKNSLAFD------------LGKVGLSKNLNGLDLRNNRIYG----TLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp CCTTSCCSEEECCSSEECCB------------GGGCCCCTTCCEEECCSSCCEE----CCCGGGGGCTTCCEEECCSSEE
T ss_pred cccccccccccccccccccc------------ccccccccccccccCccCeecc----cCChHHhCCCCCCEEECcCCcc
Confidence 12345666667776666542 2223356899999999999996 4888999999999999999998
Q ss_pred CchhHHhHHHHHHhhcCCCCCccEEEccCCC
Q 012515 394 EDDGIRSLIPYFVQASERCNPLVELYLENCE 424 (462)
Q Consensus 394 ~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~ 424 (462)
+.. +|. +..+++|+.+++++|+
T Consensus 281 ~g~-----iP~----~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 281 CGE-----IPQ----GGNLQRFDVSAYANNK 302 (313)
T ss_dssp EEE-----CCC----STTGGGSCGGGTCSSS
T ss_pred ccc-----CCC----cccCCCCCHHHhCCCc
Confidence 843 542 3444566666666665
No 12
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.58 E-value=4.4e-16 Score=145.50 Aligned_cols=233 Identities=18% Similarity=0.175 Sum_probs=145.7
Q ss_pred ccceeeeccccchHhhh-hhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhccc
Q 012515 175 YARCLRLQNALCVEETC-QLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKR 253 (462)
Q Consensus 175 ~~~~l~l~~~~~~~~~~-~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~ 253 (462)
.++.+++.++.+.+++. .+.++++|++|++++|.+....... +.++++|++|++++|+++.....
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~----f~~l~~L~~L~l~~n~l~~l~~~---------- 97 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA----FAPLVKLERLYLSKNQLKELPEK---------- 97 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT----TTTCTTCCEEECCSSCCSBCCSS----------
T ss_pred CCCEEECcCCcCCCcChhHhhccccccccccccccccccchhh----hhCCCccCEecccCCccCcCccc----------
Confidence 45666666666665554 3456677777777777654432211 34566777777777766522110
Q ss_pred ccCCCccEEecCCCCCCCCCCc------------------hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhh
Q 012515 254 KRIHKIENLSIDISSFIENCPS------------------SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLE 315 (462)
Q Consensus 254 ~~~~~L~~L~l~~~~~~~~~~~------------------~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 315 (462)
....+..|.+.+|.+...... .........+..+++|+.+++++|.+... +. .
T Consensus 98 -~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l-~~-------~ 168 (305)
T d1xkua_ 98 -MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQ-------G 168 (305)
T ss_dssp -CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CS-------S
T ss_pred -hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc-Cc-------c
Confidence 023344444444443321100 00011223456677888888888877652 11 1
Q ss_pred CCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCc
Q 012515 316 ASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIED 395 (462)
Q Consensus 316 ~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~ 395 (462)
..++|++|++++|..+...+ ..+. ++..++.|++++|.+++. .+..+.++++|++|+|++|.|+.
T Consensus 169 ~~~~L~~L~l~~n~~~~~~~--------~~~~---~~~~l~~L~~s~n~l~~~----~~~~~~~l~~L~~L~L~~N~L~~ 233 (305)
T d1xkua_ 169 LPPSLTELHLDGNKITKVDA--------ASLK---GLNNLAKLGLSFNSISAV----DNGSLANTPHLRELHLNNNKLVK 233 (305)
T ss_dssp CCTTCSEEECTTSCCCEECT--------GGGT---TCTTCCEEECCSSCCCEE----CTTTGGGSTTCCEEECCSSCCSS
T ss_pred cCCccCEEECCCCcCCCCCh--------hHhh---cccccccccccccccccc----ccccccccccceeeecccccccc
Confidence 24678888888888775433 3333 567899999999999872 24567888999999999999886
Q ss_pred hhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHH--HHHHhcCCCCCcEEEccCCCCC
Q 012515 396 DGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQL--LDTLSTLRRPPTSLSIADNNLG 455 (462)
Q Consensus 396 ~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l--~~~l~~l~~~L~~L~Ls~N~l~ 455 (462)
+| ..+..+++|+.|++++|+|+..+...+ ...... ..+|+.|++++|++.
T Consensus 234 ------lp---~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~-~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 234 ------VP---GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTK-KASYSGVSLFSNPVQ 285 (305)
T ss_dssp ------CC---TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTT-SCCCSEEECCSSSSC
T ss_pred ------cc---cccccccCCCEEECCCCccCccChhhccCcchhcc-cCCCCEEECCCCcCc
Confidence 55 567788999999999999887322111 112223 456999999999986
No 13
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.57 E-value=9e-15 Score=123.54 Aligned_cols=133 Identities=12% Similarity=0.157 Sum_probs=79.3
Q ss_pred HHHHhhcCCCCCCEEecCCC-CCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEE
Q 012515 280 ELVSFLSSGRSLCSLKLRHC-HLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLL 358 (462)
Q Consensus 280 ~l~~~l~~l~~L~~L~Ls~n-~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L 358 (462)
.+.....+.+.|++|+|+++ .+++.+...++.++..+ ++|++|+|++|.++ +.+...++..+.. .++|++|
T Consensus 6 ~l~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n-~~L~~L~Ls~n~l~----~~~~~~la~~L~~---n~~L~~L 77 (167)
T d1pgva_ 6 CINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNS-KHIEKFSLANTAIS----DSEARGLIELIET---SPSLRVL 77 (167)
T ss_dssp HHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTC-SCCCEEECTTSCCB----HHHHTTHHHHHHH---CSSCCEE
T ss_pred HHHHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhC-Cccceeeccccccc----hhHHHHHhhhhhh---cccccce
Confidence 45555556678888888864 58887888777776443 56666666666665 2344445555542 2456666
Q ss_pred EccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCC---CCchhHHhHHHHHHhhcCCCCCccEEEccCCC
Q 012515 359 NLRGNNLCKADARDLGSALVHIPNLEILDISDNT---IEDDGIRSLIPYFVQASERCNPLVELYLENCE 424 (462)
Q Consensus 359 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~---l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~ 424 (462)
+|++|.|+++|+..+..++..+++|++|++++|. ++++|+..++. .+..+++|++|+++.+.
T Consensus 78 ~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~----~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 78 NVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMM----AIEENESLLRVGISFAS 142 (167)
T ss_dssp ECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHH----HHHHCSSCCEEECCCCC
T ss_pred eeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHH----HHHhCCCccEeeCcCCC
Confidence 6666666666666666666666666666666553 44455555542 33444556666665543
No 14
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.53 E-value=3.4e-14 Score=136.61 Aligned_cols=148 Identities=24% Similarity=0.329 Sum_probs=68.3
Q ss_pred CCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccc
Q 012515 257 HKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSK 336 (462)
Q Consensus 257 ~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 336 (462)
.+|++|++++|.+.. + ..+..+++|+.|++++|.+++... ...+++|++|+++++.+++..+
T Consensus 219 ~~L~~L~l~~n~l~~---------~-~~l~~l~~L~~L~l~~n~l~~~~~-------~~~~~~L~~L~l~~~~l~~~~~- 280 (384)
T d2omza2 219 TNLDELSLNGNQLKD---------I-GTLASLTNLTDLDLANNQISNLAP-------LSGLTKLTELKLGANQISNISP- 280 (384)
T ss_dssp TTCCEEECCSSCCCC---------C-GGGGGCTTCSEEECCSSCCCCCGG-------GTTCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCEEECCCCCCCC---------c-chhhcccccchhccccCccCCCCc-------ccccccCCEeeccCcccCCCCc-
Confidence 445555555555443 1 123445566666666666554221 1234566666666666553211
Q ss_pred cCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCcc
Q 012515 337 YDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLV 416 (462)
Q Consensus 337 ~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~ 416 (462)
+. .+..++.+.++.|.+++ + ..+..+++++.|++++|.+++ ++ .+..+++|+
T Consensus 281 ---------~~---~~~~l~~l~~~~n~l~~-----~-~~~~~~~~l~~L~ls~n~l~~------l~----~l~~l~~L~ 332 (384)
T d2omza2 281 ---------LA---GLTALTNLELNENQLED-----I-SPISNLKNLTYLTLYFNNISD------IS----PVSSLTKLQ 332 (384)
T ss_dssp ---------GT---TCTTCSEEECCSSCCSC-----C-GGGGGCTTCSEEECCSSCCSC------CG----GGGGCTTCC
T ss_pred ---------cc---ccccccccccccccccc-----c-cccchhcccCeEECCCCCCCC------Cc----ccccCCCCC
Confidence 11 22333333333333332 1 124445555555555555554 21 133345555
Q ss_pred EEEccCCCCChhhHHHHHHHHhcCCCCCcEEEccCCCCCCc
Q 012515 417 ELYLENCELSGRGVSQLLDTLSTLRRPPTSLSIADNNLGRF 457 (462)
Q Consensus 417 ~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l~~~ 457 (462)
+|++++|+|++ +. .+.. .++|++|++++|+|++-
T Consensus 333 ~L~L~~n~l~~-----l~-~l~~-l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 333 RLFFANNKVSD-----VS-SLAN-LTNINWLSAGHNQISDL 366 (384)
T ss_dssp EEECCSSCCCC-----CG-GGGG-CTTCCEEECCSSCCCBC
T ss_pred EEECCCCCCCC-----Ch-hHcC-CCCCCEEECCCCcCCCC
Confidence 55555555554 11 2344 23455555555555543
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=2.5e-14 Score=127.44 Aligned_cols=188 Identities=20% Similarity=0.249 Sum_probs=140.0
Q ss_pred cCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCC
Q 012515 195 RESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCP 274 (462)
Q Consensus 195 ~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~ 274 (462)
.+.+|++|++.+|.+... .. ...+++|++|++++|.+++..+ + ..+.+++++++++|.++..
T Consensus 39 ~l~~L~~L~l~~~~i~~l-~~-----l~~l~~L~~L~ls~n~i~~~~~--l--------~~l~~l~~l~~~~n~~~~i-- 100 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTI-EG-----VQYLNNLIGLELKDNQITDLAP--L--------KNLTKITELELSGNPLKNV-- 100 (227)
T ss_dssp HHHTCCEEECTTSCCCCC-TT-----GGGCTTCCEEECCSSCCCCCGG--G--------TTCCSCCEEECCSCCCSCC--
T ss_pred HcCCcCEEECCCCCCCcc-hh-----HhcCCCCcEeecCCceeecccc--c--------ccccccccccccccccccc--
Confidence 346689999998876542 22 3568999999999998875322 1 1278899999999988762
Q ss_pred chhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCC
Q 012515 275 SSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQS 354 (462)
Q Consensus 275 ~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~ 354 (462)
..+..++.|++++++++...+... ....+.++.+.++++.+....+ +. ++.+
T Consensus 101 --------~~l~~l~~L~~l~l~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~----------~~---~~~~ 152 (227)
T d1h6ua2 101 --------SAIAGLQSIKTLDLTSTQITDVTP-------LAGLSNLQVLYLDLNQITNISP----------LA---GLTN 152 (227)
T ss_dssp --------GGGTTCTTCCEEECTTSCCCCCGG-------GTTCTTCCEEECCSSCCCCCGG----------GG---GCTT
T ss_pred --------ccccccccccccccccccccccch-------hccccchhhhhchhhhhchhhh----------hc---cccc
Confidence 235678999999999998765322 2345789999999988875221 23 4478
Q ss_pred ccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHH
Q 012515 355 LRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLL 434 (462)
Q Consensus 355 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~ 434 (462)
|++|++++|.+++. ..+.++++|++|++++|.+++ ++ .+..+++|++|++++|++++. .
T Consensus 153 L~~L~l~~n~~~~~------~~l~~l~~L~~L~Ls~n~l~~------l~----~l~~l~~L~~L~Ls~N~lt~i-----~ 211 (227)
T d1h6ua2 153 LQYLSIGNAQVSDL------TPLANLSKLTTLKADDNKISD------IS----PLASLPNLIEVHLKNNQISDV-----S 211 (227)
T ss_dssp CCEEECCSSCCCCC------GGGTTCTTCCEEECCSSCCCC------CG----GGGGCTTCCEEECTTSCCCBC-----G
T ss_pred cccccccccccccc------hhhcccccceecccCCCccCC------Ch----hhcCCCCCCEEECcCCcCCCC-----c
Confidence 99999999998863 237889999999999999987 53 356678999999999999983 2
Q ss_pred HHHhcCCCCCcEEEccC
Q 012515 435 DTLSTLRRPPTSLSIAD 451 (462)
Q Consensus 435 ~~l~~l~~~L~~L~Ls~ 451 (462)
.+.. .++|++|++++
T Consensus 212 -~l~~-l~~L~~L~lsn 226 (227)
T d1h6ua2 212 -PLAN-TSNLFIVTLTN 226 (227)
T ss_dssp -GGTT-CTTCCEEEEEE
T ss_pred -cccc-CCCCCEEEeeC
Confidence 3666 45699999973
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.51 E-value=3.5e-15 Score=139.26 Aligned_cols=212 Identities=19% Similarity=0.130 Sum_probs=136.5
Q ss_pred ccceeeeccccchHhh-hhhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHH----
Q 012515 175 YARCLRLQNALCVEET-CQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL---- 249 (462)
Q Consensus 175 ~~~~l~l~~~~~~~~~-~~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l---- 249 (462)
.++.+.+.++....+. ..+.++++|++|++++|.+..... .....+..|++.+|.+.......+....
T Consensus 56 ~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~-------~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~ 128 (305)
T d1xkua_ 56 NLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPE-------KMPKTLQELRVHENEITKVRKSVFNGLNQMIV 128 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCS-------SCCTTCCEEECCSSCCCBBCHHHHTTCTTCCE
T ss_pred cccccccccccccccchhhhhCCCccCEecccCCccCcCcc-------chhhhhhhhhccccchhhhhhhhhhccccccc
Confidence 3444555555444432 334456666777776665443221 1234555666655554432222111000
Q ss_pred --------------hcccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhh
Q 012515 250 --------------CSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLE 315 (462)
Q Consensus 250 --------------~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 315 (462)
......+.+|+.+++++|.+..... ...++|++|++++|.+....+.. +.
T Consensus 129 l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~-----------~~~~~L~~L~l~~n~~~~~~~~~-----~~ 192 (305)
T d1xkua_ 129 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ-----------GLPPSLTELHLDGNKITKVDAAS-----LK 192 (305)
T ss_dssp EECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCS-----------SCCTTCSEEECTTSCCCEECTGG-----GT
T ss_pred cccccccccccCCCccccccccccCccccccCCccccCc-----------ccCCccCEEECCCCcCCCCChhH-----hh
Confidence 0011225778999999998876321 13579999999999988765543 35
Q ss_pred CCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCc
Q 012515 316 ASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIED 395 (462)
Q Consensus 316 ~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~ 395 (462)
.++.++.|++++|.+++..+ ..+. ++++|++|+|++|+|+. ++.++..+++|+.|++++|+|+.
T Consensus 193 ~~~~l~~L~~s~n~l~~~~~--------~~~~---~l~~L~~L~L~~N~L~~-----lp~~l~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 193 GLNNLAKLGLSFNSISAVDN--------GSLA---NTPHLRELHLNNNKLVK-----VPGGLADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp TCTTCCEEECCSSCCCEECT--------TTGG---GSTTCCEEECCSSCCSS-----CCTTTTTCSSCCEEECCSSCCCC
T ss_pred cccccccccccccccccccc--------cccc---ccccceeeecccccccc-----cccccccccCCCEEECCCCccCc
Confidence 57899999999999986433 3333 56899999999999985 77889999999999999999986
Q ss_pred hhHHhHHHHHHhhcCCCCCccEEEccCCCCCh
Q 012515 396 DGIRSLIPYFVQASERCNPLVELYLENCELSG 427 (462)
Q Consensus 396 ~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~ 427 (462)
-+-..+.+. .......+|+.|+|++|+++.
T Consensus 257 i~~~~f~~~--~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 257 IGSNDFCPP--GYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp CCTTSSSCS--SCCTTSCCCSEEECCSSSSCG
T ss_pred cChhhccCc--chhcccCCCCEEECCCCcCcc
Confidence 221111110 234456889999999999875
No 17
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.51 E-value=1.1e-13 Score=116.69 Aligned_cols=137 Identities=13% Similarity=0.215 Sum_probs=114.2
Q ss_pred HHHHHHHHhhCCCCccEEEecCC-CCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCC
Q 012515 306 GRMVFSSLLEASSSLSILDLSGN-SIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLE 384 (462)
Q Consensus 306 ~~~l~~~l~~~~~~L~~L~Ls~n-~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 384 (462)
+....+.+..+.++|++|+|+++ .++ +.+...+...+. ..++|++|+|++|.+++.++..++.++..+++|+
T Consensus 3 v~~~l~~l~~n~~~L~~L~L~~~~~i~----~~~~~~l~~~L~---~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~ 75 (167)
T d1pgva_ 3 VESCINRLREDDTDLKEVNINNMKRVS----KERIRSLIEAAC---NSKHIEKFSLANTAISDSEARGLIELIETSPSLR 75 (167)
T ss_dssp HHHHHHHHHTTCSSCCEEECTTCCSSC----HHHHHHHHHHHT---TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCC
T ss_pred HHHHHHHHHhCCCCCcEEEeCCCCCCC----HHHHHHHHHHHh---hCCccceeeccccccchhHHHHHhhhhhhccccc
Confidence 34445556677799999999985 466 344445666666 4578999999999999999999999999999999
Q ss_pred EEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCC---CChhhHHHHHHHHhcCCCCCcEEEccCCCC
Q 012515 385 ILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCE---LSGRGVSQLLDTLSTLRRPPTSLSIADNNL 454 (462)
Q Consensus 385 ~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~---l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l 454 (462)
+|+|++|.|+++|+..++ ..+..+++|++|++++|. +++.++.++++++.. +++|+.|+++++..
T Consensus 76 ~L~L~~n~i~~~g~~~l~----~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~-n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 76 VLNVESNFLTPELLARLL----RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEE-NESLLRVGISFASM 143 (167)
T ss_dssp EEECCSSBCCHHHHHHHH----HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHH-CSSCCEEECCCCCH
T ss_pred ceeeehhhcchHHHHHHH----HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHh-CCCccEeeCcCCCc
Confidence 999999999999999988 557788999999999885 667888999999999 78899999988754
No 18
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.51 E-value=1.9e-13 Score=115.21 Aligned_cols=134 Identities=13% Similarity=0.083 Sum_probs=75.5
Q ss_pred HHHHHhhcCCCCCCEEecCC-CCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccE
Q 012515 279 VELVSFLSSGRSLCSLKLRH-CHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRL 357 (462)
Q Consensus 279 ~~l~~~l~~l~~L~~L~Ls~-n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~ 357 (462)
+.+.....+.+.|++|+|++ +.+++.++..+++++..+ ++|++|++++|.++ +.+...+...+. ...+++.
T Consensus 7 ~~l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n-~~L~~L~Ls~n~l~----~~~~~~L~~~l~---~~~~l~~ 78 (166)
T d1io0a_ 7 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTN-TYVKKFSIVGTRSN----DPVAFALAEMLK---VNNTLKS 78 (166)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTC-CSCCEEECTTSCCC----HHHHHHHHHHHH---HCSSCCE
T ss_pred HHHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcC-CccCeeeccCCccc----HHHHHHHHHHHh---hcccchh
Confidence 34555666678888888887 568888888887776443 55666666666555 233333444444 2245555
Q ss_pred EEccCCCCCcchHHHHHHHhhcCCCCCEEeC--CCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCC
Q 012515 358 LNLRGNNLCKADARDLGSALVHIPNLEILDI--SDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCE 424 (462)
Q Consensus 358 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L--s~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~ 424 (462)
+++++|.++++|+..+..++..+++|+.++| ++|.++++|..+++.. +..+++|++|++..+.
T Consensus 79 l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~----L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 79 LNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANM----LEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp EECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHH----HHHCSSCCEEECCCSS
T ss_pred hhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHH----HHhCCCcCEEeCcCCC
Confidence 5555555555555555555555555554333 3445555555555532 2334555555555443
No 19
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=3.8e-14 Score=136.21 Aligned_cols=193 Identities=20% Similarity=0.239 Sum_probs=150.4
Q ss_pred hhhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCC
Q 012515 191 CQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFI 270 (462)
Q Consensus 191 ~~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~ 270 (462)
.....+++++.+++++|.+..... ...+++|++|++++|.+++.. . +.. +.+|+.|++++|.+.
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~~------~~~~~~L~~L~l~~n~l~~~~--~----l~~----l~~L~~L~l~~n~l~ 254 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDITP------LGILTNLDELSLNGNQLKDIG--T----LAS----LTNLTDLDLANNQIS 254 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG------GGGCTTCCEEECCSSCCCCCG--G----GGG----CTTCSEEECCSSCCC
T ss_pred cccccccccceeeccCCccCCCCc------ccccCCCCEEECCCCCCCCcc--h----hhc----ccccchhccccCccC
Confidence 445677889999999988665332 245789999999999987632 1 111 788999999999987
Q ss_pred CCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCC
Q 012515 271 ENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGK 350 (462)
Q Consensus 271 ~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~ 350 (462)
. +. .+..+++|++|++++|++..... ......++.++++.|.+++. ..+.
T Consensus 255 ~---------~~-~~~~~~~L~~L~l~~~~l~~~~~-------~~~~~~l~~l~~~~n~l~~~----------~~~~--- 304 (384)
T d2omza2 255 N---------LA-PLSGLTKLTELKLGANQISNISP-------LAGLTALTNLELNENQLEDI----------SPIS--- 304 (384)
T ss_dssp C---------CG-GGTTCTTCSEEECCSSCCCCCGG-------GTTCTTCSEEECCSSCCSCC----------GGGG---
T ss_pred C---------CC-cccccccCCEeeccCcccCCCCc-------cccccccccccccccccccc----------cccc---
Confidence 6 21 36778999999999999876322 24568899999999998852 1233
Q ss_pred CCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhH
Q 012515 351 SLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGV 430 (462)
Q Consensus 351 ~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 430 (462)
.+..++.|++++|++++ ++ .+..+++|++|++++|.|++ ++ .+..+++|++|++++|+|++.
T Consensus 305 ~~~~l~~L~ls~n~l~~-----l~-~l~~l~~L~~L~L~~n~l~~------l~----~l~~l~~L~~L~l~~N~l~~l-- 366 (384)
T d2omza2 305 NLKNLTYLTLYFNNISD-----IS-PVSSLTKLQRLFFANNKVSD------VS----SLANLTNINWLSAGHNQISDL-- 366 (384)
T ss_dssp GCTTCSEEECCSSCCSC-----CG-GGGGCTTCCEEECCSSCCCC------CG----GGGGCTTCCEEECCSSCCCBC--
T ss_pred hhcccCeEECCCCCCCC-----Cc-ccccCCCCCEEECCCCCCCC------Ch----hHcCCCCCCEEECCCCcCCCC--
Confidence 45889999999999997 33 37889999999999999987 53 356779999999999999983
Q ss_pred HHHHHHHhcCCCCCcEEEccCC
Q 012515 431 SQLLDTLSTLRRPPTSLSIADN 452 (462)
Q Consensus 431 ~~l~~~l~~l~~~L~~L~Ls~N 452 (462)
. .+..+ ++|++|+|++|
T Consensus 367 ---~-~l~~l-~~L~~L~L~~N 383 (384)
T d2omza2 367 ---T-PLANL-TRITQLGLNDQ 383 (384)
T ss_dssp ---G-GGTTC-TTCSEEECCCE
T ss_pred ---h-hhccC-CCCCEeeCCCC
Confidence 2 26664 56999999998
No 20
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=4.1e-15 Score=137.39 Aligned_cols=206 Identities=17% Similarity=0.088 Sum_probs=154.3
Q ss_pred cccceeeeccccchHhhh-hhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccC-CCCChhHHHHHHHHHhc
Q 012515 174 HYARCLRLQNALCVEETC-QLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLH-CKLSPSFVEGICRSLCS 251 (462)
Q Consensus 174 ~~~~~l~l~~~~~~~~~~-~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~-~~l~~~~~~~l~~~l~~ 251 (462)
..++.|.++++.+.+++. .+.++++|++|++++|.+....... ......+.++.... +.+.......+..
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~----~~~~~~~~~l~~~~~~~~~~l~~~~~~~---- 103 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAA----FTGLALLEQLDLSDNAQLRSVDPATFHG---- 103 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT----TTTCTTCCEEECCSCTTCCCCCTTTTTT----
T ss_pred CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccc----ccccccccccccccccccccccchhhcc----
Confidence 456788898888877665 4668899999999999865443222 34567888887764 4555433333222
Q ss_pred ccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCC
Q 012515 252 KRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIG 331 (462)
Q Consensus 252 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 331 (462)
+.+|++|++++|.+.. .....+....+|+.+++++|.++...... +...++|++|++++|.++
T Consensus 104 ----l~~L~~L~l~~n~~~~--------~~~~~~~~~~~L~~l~l~~N~l~~i~~~~-----f~~~~~L~~L~l~~N~l~ 166 (284)
T d1ozna_ 104 ----LGRLHTLHLDRCGLQE--------LGPGLFRGLAALQYLYLQDNALQALPDDT-----FRDLGNLTHLFLHGNRIS 166 (284)
T ss_dssp ----CTTCCEEECTTSCCCC--------CCTTTTTTCTTCCEEECCSSCCCCCCTTT-----TTTCTTCCEEECCSSCCC
T ss_pred ----cccCCEEecCCccccc--------ccccccchhcccchhhhccccccccChhH-----hccccchhhcccccCccc
Confidence 7889999999998866 22345566789999999999998744332 345688999999999998
Q ss_pred CcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCC
Q 012515 332 GWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASER 411 (462)
Q Consensus 332 ~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~ 411 (462)
...+ ..+.++++|+.+++++|++++ ..+..+..+++|++|++++|.+... .+ ..+..
T Consensus 167 ~l~~-----------~~f~~l~~L~~l~l~~N~l~~----i~~~~f~~l~~L~~L~l~~N~i~~~-----~~---~~~~~ 223 (284)
T d1ozna_ 167 SVPE-----------RAFRGLHSLDRLLLHQNRVAH----VHPHAFRDLGRLMTLYLFANNLSAL-----PT---EALAP 223 (284)
T ss_dssp EECT-----------TTTTTCTTCCEEECCSSCCCE----ECTTTTTTCTTCCEEECCSSCCSCC-----CH---HHHTT
T ss_pred ccch-----------hhhccccccchhhhhhccccc----cChhHhhhhhhcccccccccccccc-----cc---ccccc
Confidence 5333 233377899999999999997 2467789999999999999999873 22 55677
Q ss_pred CCCccEEEccCCCCCh
Q 012515 412 CNPLVELYLENCELSG 427 (462)
Q Consensus 412 ~~~L~~L~L~~n~l~~ 427 (462)
+++|+.|++++|++..
T Consensus 224 ~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 224 LRALQYLRLNDNPWVC 239 (284)
T ss_dssp CTTCCEEECCSSCEEC
T ss_pred ccccCEEEecCCCCCC
Confidence 8999999999999874
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=3.7e-14 Score=124.65 Aligned_cols=143 Identities=24% Similarity=0.290 Sum_probs=83.4
Q ss_pred CCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCccc
Q 012515 256 IHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLS 335 (462)
Q Consensus 256 ~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 335 (462)
+++|++|++++|.+++ +. .+..+++|++|++++|++++-. . ...+++|+.|++++|.+...
T Consensus 67 l~~L~~L~L~~n~i~~---------l~-~~~~l~~L~~L~l~~n~i~~l~--~-----l~~l~~L~~L~l~~~~~~~~-- 127 (210)
T d1h6ta2 67 LPNVTKLFLNGNKLTD---------IK-PLANLKNLGWLFLDENKVKDLS--S-----LKDLKKLKSLSLEHNGISDI-- 127 (210)
T ss_dssp CTTCCEEECCSSCCCC---------CG-GGTTCTTCCEEECCSSCCCCGG--G-----GTTCTTCCEEECTTSCCCCC--
T ss_pred CCCCCEEeCCCccccC---------cc-ccccCccccccccccccccccc--c-----cccccccccccccccccccc--
Confidence 4556666666665554 11 2345666777777777666521 1 23356677777777765531
Q ss_pred ccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCc
Q 012515 336 KYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPL 415 (462)
Q Consensus 336 ~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L 415 (462)
..+. +++.++.+++++|.+++. ..+..+++|+++++++|.+++ ++ .+..+++|
T Consensus 128 --------~~l~---~l~~l~~l~~~~n~l~~~------~~~~~l~~L~~l~l~~n~l~~------i~----~l~~l~~L 180 (210)
T d1h6ta2 128 --------NGLV---HLPQLESLYLGNNKITDI------TVLSRLTKLDTLSLEDNQISD------IV----PLAGLTKL 180 (210)
T ss_dssp --------GGGG---GCTTCCEEECCSSCCCCC------GGGGGCTTCSEEECCSSCCCC------CG----GGTTCTTC
T ss_pred --------cccc---cccccccccccccccccc------ccccccccccccccccccccc------cc----cccCCCCC
Confidence 1122 445677777777777652 234566777777777777765 32 24556777
Q ss_pred cEEEccCCCCChhhHHHHHHHHhcCCCCCcEEEccC
Q 012515 416 VELYLENCELSGRGVSQLLDTLSTLRRPPTSLSIAD 451 (462)
Q Consensus 416 ~~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L~Ls~ 451 (462)
++|++++|+|++ +. .+..+ ++|++|+|++
T Consensus 181 ~~L~Ls~N~i~~-----l~-~l~~l-~~L~~L~Ls~ 209 (210)
T d1h6ta2 181 QNLYLSKNHISD-----LR-ALAGL-KNLDVLELFS 209 (210)
T ss_dssp CEEECCSSCCCB-----CG-GGTTC-TTCSEEEEEE
T ss_pred CEEECCCCCCCC-----Ch-hhcCC-CCCCEEEccC
Confidence 777777777765 32 35553 4477777753
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.48 E-value=6.8e-14 Score=121.81 Aligned_cols=126 Identities=20% Similarity=0.290 Sum_probs=66.7
Q ss_pred CCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCccc
Q 012515 256 IHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLS 335 (462)
Q Consensus 256 ~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 335 (462)
+++|++|++++|+++. +. .++.+++|++|++++|.+..... ...++.|+.|++++|.+...
T Consensus 61 l~nL~~L~Ls~N~l~~---------~~-~l~~l~~L~~L~l~~n~~~~~~~-------l~~l~~L~~L~l~~~~~~~~-- 121 (199)
T d2omxa2 61 LNNLTQINFSNNQLTD---------IT-PLKNLTKLVDILMNNNQIADITP-------LANLTNLTGLTLFNNQITDI-- 121 (199)
T ss_dssp CTTCCEEECCSSCCCC---------CG-GGTTCTTCCEEECCSSCCCCCGG-------GTTCTTCSEEECCSSCCCCC--
T ss_pred CCCcCcCccccccccC---------cc-cccCCcccccccccccccccccc-------cccccccccccccccccccc--
Confidence 4455555555555544 11 14455566666666665544211 13345666666666655431
Q ss_pred ccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCc
Q 012515 336 KYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPL 415 (462)
Q Consensus 336 ~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L 415 (462)
..+. ++++|+.|++++|++.. + +.+..+++|+.|++++|.+++ + ..+.++++|
T Consensus 122 --------~~~~---~l~~L~~L~l~~n~l~~-----~-~~l~~~~~L~~L~l~~n~l~~------l----~~l~~l~~L 174 (199)
T d2omxa2 122 --------DPLK---NLTNLNRLELSSNTISD-----I-SALSGLTSLQQLNFSSNQVTD------L----KPLANLTTL 174 (199)
T ss_dssp --------GGGT---TCTTCSEEECCSSCCCC-----C-GGGTTCTTCSEEECCSSCCCC------C----GGGTTCTTC
T ss_pred --------cccc---hhhhhHHhhhhhhhhcc-----c-ccccccccccccccccccccC------C----ccccCCCCC
Confidence 1122 34566666666666653 2 235556666666666666655 3 224455666
Q ss_pred cEEEccCCCCCh
Q 012515 416 VELYLENCELSG 427 (462)
Q Consensus 416 ~~L~L~~n~l~~ 427 (462)
++|++++|++++
T Consensus 175 ~~L~ls~N~i~~ 186 (199)
T d2omxa2 175 ERLDISSNKVSD 186 (199)
T ss_dssp CEEECCSSCCCC
T ss_pred CEEECCCCCCCC
Confidence 666666666655
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.47 E-value=8.4e-14 Score=122.29 Aligned_cols=165 Identities=22% Similarity=0.191 Sum_probs=126.9
Q ss_pred CCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCc
Q 012515 196 ESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPS 275 (462)
Q Consensus 196 ~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~ 275 (462)
+..|++|+++++.+..... ...+++|++|++++|.+++... +. .+.+|+.|++++|++..
T Consensus 45 L~~L~~L~l~~~~i~~l~~------l~~l~~L~~L~L~~n~i~~l~~--~~--------~l~~L~~L~l~~n~i~~---- 104 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQG------IQYLPNVTKLFLNGNKLTDIKP--LA--------NLKNLGWLFLDENKVKD---- 104 (210)
T ss_dssp HHTCCEEECTTSCCCCCTT------GGGCTTCCEEECCSSCCCCCGG--GT--------TCTTCCEEECCSSCCCC----
T ss_pred hcCccEEECcCCCCCCchh------HhhCCCCCEEeCCCccccCccc--cc--------cCccccccccccccccc----
Confidence 3568999999998654321 3568999999999999875332 11 27889999999999876
Q ss_pred hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCc
Q 012515 276 SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSL 355 (462)
Q Consensus 276 ~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L 355 (462)
+. .+..+++|+.|++++|.+.... . ...++.++.+++++|.+++. ..+. .+++|
T Consensus 105 -----l~-~l~~l~~L~~L~l~~~~~~~~~--~-----l~~l~~l~~l~~~~n~l~~~----------~~~~---~l~~L 158 (210)
T d1h6ta2 105 -----LS-SLKDLKKLKSLSLEHNGISDIN--G-----LVHLPQLESLYLGNNKITDI----------TVLS---RLTKL 158 (210)
T ss_dssp -----GG-GGTTCTTCCEEECTTSCCCCCG--G-----GGGCTTCCEEECCSSCCCCC----------GGGG---GCTTC
T ss_pred -----cc-cccccccccccccccccccccc--c-----cccccccccccccccccccc----------cccc---ccccc
Confidence 32 4677899999999999886522 1 24468999999999998852 1123 45789
Q ss_pred cEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccC
Q 012515 356 RLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLEN 422 (462)
Q Consensus 356 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~ 422 (462)
+++++++|++++ ++ .+.++++|++|++++|.|++ ++ .+..+++|+.|+|++
T Consensus 159 ~~l~l~~n~l~~-----i~-~l~~l~~L~~L~Ls~N~i~~------l~----~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 159 DTLSLEDNQISD-----IV-PLAGLTKLQNLYLSKNHISD------LR----ALAGLKNLDVLELFS 209 (210)
T ss_dssp SEEECCSSCCCC-----CG-GGTTCTTCCEEECCSSCCCB------CG----GGTTCTTCSEEEEEE
T ss_pred cccccccccccc-----cc-cccCCCCCCEEECCCCCCCC------Ch----hhcCCCCCCEEEccC
Confidence 999999999986 33 38889999999999999987 53 467779999999875
No 24
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.45 E-value=3.1e-13 Score=120.17 Aligned_cols=185 Identities=18% Similarity=0.206 Sum_probs=140.0
Q ss_pred ccceeeeccccchHhhhhhhcCCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccc
Q 012515 175 YARCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRK 254 (462)
Q Consensus 175 ~~~~l~l~~~~~~~~~~~l~~~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~ 254 (462)
.++.+.+.++.+..+ ..+.++++|++|++++|.+..... ...+++++++++++|.+++.. .+ .
T Consensus 42 ~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~~~~~------l~~l~~l~~l~~~~n~~~~i~--~l----~---- 104 (227)
T d1h6ua2 42 GITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP------LKNLTKITELELSGNPLKNVS--AI----A---- 104 (227)
T ss_dssp TCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG------GTTCCSCCEEECCSCCCSCCG--GG----T----
T ss_pred CcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceeecccc------ccccccccccccccccccccc--cc----c----
Confidence 344555555555443 457788999999999998765332 356899999999999887432 12 1
Q ss_pred cCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcc
Q 012515 255 RIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWL 334 (462)
Q Consensus 255 ~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 334 (462)
.+.+|+.++++++.+... ..+...+.+..+.++++.+..... ...+++|++|++++|.+++..
T Consensus 105 ~l~~L~~l~l~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~L~~L~l~~n~~~~~~ 167 (227)
T d1h6ua2 105 GLQSIKTLDLTSTQITDV----------TPLAGLSNLQVLYLDLNQITNISP-------LAGLTNLQYLSIGNAQVSDLT 167 (227)
T ss_dssp TCTTCCEEECTTSCCCCC----------GGGTTCTTCCEEECCSSCCCCCGG-------GGGCTTCCEEECCSSCCCCCG
T ss_pred cccccccccccccccccc----------chhccccchhhhhchhhhhchhhh-------hccccccccccccccccccch
Confidence 278999999999987652 224567899999999998876432 234688999999999987521
Q ss_pred cccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCC
Q 012515 335 SKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNP 414 (462)
Q Consensus 335 ~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~ 414 (462)
.+. ++++|+.|+|++|++++ ++ .++++++|++|++++|+|++ ++ .+.++++
T Consensus 168 ----------~l~---~l~~L~~L~Ls~n~l~~-----l~-~l~~l~~L~~L~Ls~N~lt~------i~----~l~~l~~ 218 (227)
T d1h6ua2 168 ----------PLA---NLSKLTTLKADDNKISD-----IS-PLASLPNLIEVHLKNNQISD------VS----PLANTSN 218 (227)
T ss_dssp ----------GGT---TCTTCCEEECCSSCCCC-----CG-GGGGCTTCCEEECTTSCCCB------CG----GGTTCTT
T ss_pred ----------hhc---ccccceecccCCCccCC-----Ch-hhcCCCCCCEEECcCCcCCC------Cc----ccccCCC
Confidence 233 66899999999999987 33 38899999999999999997 53 3677899
Q ss_pred ccEEEccC
Q 012515 415 LVELYLEN 422 (462)
Q Consensus 415 L~~L~L~~ 422 (462)
|+.|++++
T Consensus 219 L~~L~lsn 226 (227)
T d1h6ua2 219 LFIVTLTN 226 (227)
T ss_dssp CCEEEEEE
T ss_pred CCEEEeeC
Confidence 99999974
No 25
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=1.7e-13 Score=119.18 Aligned_cols=148 Identities=22% Similarity=0.324 Sum_probs=81.7
Q ss_pred CCCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCc
Q 012515 196 ESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPS 275 (462)
Q Consensus 196 ~~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~ 275 (462)
+.++++|+++++.+... .. ...+++|++|++++|.+++..+ +. .+++|++|++++|.+..
T Consensus 39 l~~l~~L~l~~~~i~~l-~~-----l~~l~nL~~L~Ls~N~l~~~~~--l~--------~l~~L~~L~l~~n~~~~---- 98 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSI-DG-----VEYLNNLTQINFSNNQLTDITP--LK--------NLTKLVDILMNNNQIAD---- 98 (199)
T ss_dssp HTTCCEEECTTSCCCCC-TT-----GGGCTTCCEEECCSSCCCCCGG--GT--------TCTTCCEEECCSSCCCC----
T ss_pred hcCCCEEECCCCCCCCc-cc-----cccCCCcCcCccccccccCccc--cc--------CCccccccccccccccc----
Confidence 35566666666654431 11 2346666666666666654221 11 15666666666666544
Q ss_pred hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCc
Q 012515 276 SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSL 355 (462)
Q Consensus 276 ~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L 355 (462)
+. .+.+++.|+.|++++|.+..... ...+++|+.|++++|.+... ..+. .+.+|
T Consensus 99 -----~~-~l~~l~~L~~L~l~~~~~~~~~~-------~~~l~~L~~L~l~~n~l~~~----------~~l~---~~~~L 152 (199)
T d2omxa2 99 -----IT-PLANLTNLTGLTLFNNQITDIDP-------LKNLTNLNRLELSSNTISDI----------SALS---GLTSL 152 (199)
T ss_dssp -----CG-GGTTCTTCSEEECCSSCCCCCGG-------GTTCTTCSEEECCSSCCCCC----------GGGT---TCTTC
T ss_pred -----cc-ccccccccccccccccccccccc-------cchhhhhHHhhhhhhhhccc----------cccc---ccccc
Confidence 11 24556666666666666554221 23356666666666666531 1122 44566
Q ss_pred cEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCc
Q 012515 356 RLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIED 395 (462)
Q Consensus 356 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~ 395 (462)
+.|++++|++++ ++ .++++++|++|++++|+|++
T Consensus 153 ~~L~l~~n~l~~-----l~-~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 153 QQLNFSSNQVTD-----LK-PLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp SEEECCSSCCCC-----CG-GGTTCTTCCEEECCSSCCCC
T ss_pred cccccccccccC-----Cc-cccCCCCCCEEECCCCCCCC
Confidence 666666666665 22 35666666666666666665
No 26
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.32 E-value=1.9e-11 Score=102.60 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=96.6
Q ss_pred HHHHHhcCCCccEEEccC-CCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEe
Q 012515 217 CKLLIQNSETLASLEFLH-CKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLK 295 (462)
Q Consensus 217 ~~~l~~~~~~L~~L~L~~-~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~ 295 (462)
...+..+.++|++|+|++ +.+++.+...++.+ +..+++|++|+
T Consensus 9 l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~a------------------------------------l~~n~~L~~L~ 52 (166)
T d1io0a_ 9 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEA------------------------------------LKTNTYVKKFS 52 (166)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHH------------------------------------HTTCCSCCEEE
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHH------------------------------------HhcCCccCeee
Confidence 344455667777777776 45776666655554 34456777777
Q ss_pred cCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEc--cCCCCCcchHHHH
Q 012515 296 LRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNL--RGNNLCKADARDL 373 (462)
Q Consensus 296 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L--~~n~l~~~~~~~l 373 (462)
+++|.+++.+...++..+..+ +.++.+++++|.+++ .+...+...+. ..++|+.++| ++|.+++.|+.++
T Consensus 53 Ls~n~l~~~~~~~L~~~l~~~-~~l~~l~l~~~~~~~----~g~~~l~~~l~---~~~~L~~l~L~l~~n~i~~~~~~~L 124 (166)
T d1io0a_ 53 IVGTRSNDPVAFALAEMLKVN-NTLKSLNVESNFISG----SGILALVEALQ---SNTSLIELRIDNQSQPLGNNVEMEI 124 (166)
T ss_dssp CTTSCCCHHHHHHHHHHHHHC-SSCCEEECCSSCCCH----HHHHHHHHGGG---GCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred ccCCcccHHHHHHHHHHHhhc-ccchhhhhccccccc----hhHHHHHHHHH---hCccccEEeeccCCCcCcHHHHHHH
Confidence 777777777777777776554 678888888777763 44445555555 3467876554 5779999999999
Q ss_pred HHHhhcCCCCCEEeCCCCCCC
Q 012515 374 GSALVHIPNLEILDISDNTIE 394 (462)
Q Consensus 374 ~~~l~~~~~L~~L~Ls~N~l~ 394 (462)
+.++..+++|++|+++.+...
T Consensus 125 a~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 125 ANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeCcCCCCc
Confidence 999999999999999887654
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.29 E-value=1.1e-12 Score=104.56 Aligned_cols=85 Identities=26% Similarity=0.348 Sum_probs=39.8
Q ss_pred CCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCch
Q 012515 317 SSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDD 396 (462)
Q Consensus 317 ~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~ 396 (462)
+.+|++|++++|.++. ++..+. .+++|++|++++|.|++ + +.+..+++|++|++++|.|++
T Consensus 19 l~~L~~L~ls~N~l~~---------lp~~~~---~l~~L~~L~l~~N~i~~-----l-~~~~~l~~L~~L~l~~N~i~~- 79 (124)
T d1dcea3 19 LLLVTHLDLSHNRLRA---------LPPALA---ALRCLEVLQASDNALEN-----V-DGVANLPRLQELLLCNNRLQQ- 79 (124)
T ss_dssp GTTCCEEECCSSCCCC---------CCGGGG---GCTTCCEEECCSSCCCC-----C-GGGTTCSSCCEEECCSSCCCS-
T ss_pred CCCCCEEECCCCccCc---------chhhhh---hhhcccccccccccccc-----c-CccccccccCeEECCCCccCC-
Confidence 4455555555555543 112223 33455555555555553 2 234555555555555555543
Q ss_pred hHHhHHHHHHhhcCCCCCccEEEccCCCCC
Q 012515 397 GIRSLIPYFVQASERCNPLVELYLENCELS 426 (462)
Q Consensus 397 g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~ 426 (462)
++.+ ..+..+++|+.|++++|+++
T Consensus 80 -----~~~~-~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 80 -----SAAI-QPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp -----SSTT-GGGGGCTTCCEEECTTSGGG
T ss_pred -----CCCc-hhhcCCCCCCEEECCCCcCC
Confidence 2111 22334455555555555544
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.6e-12 Score=108.69 Aligned_cols=129 Identities=17% Similarity=0.207 Sum_probs=77.3
Q ss_pred CCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCC
Q 012515 287 SGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLC 366 (462)
Q Consensus 287 ~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~ 366 (462)
+...+++|+|++|+|+.- . .+ ...+++|++|+|++|.++. +..+..+++|++|++++|+++
T Consensus 16 n~~~lr~L~L~~n~I~~i-~-~~----~~~l~~L~~L~Ls~N~i~~-------------l~~~~~l~~L~~L~ls~N~i~ 76 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVI-E-NL----GATLDQFDAIDFSDNEIRK-------------LDGFPLLRRLKTLLVNNNRIC 76 (162)
T ss_dssp CTTSCEEEECTTSCCCSC-C-CG----GGGTTCCSEEECCSSCCCE-------------ECCCCCCSSCCEEECCSSCCC
T ss_pred CcCcCcEEECCCCCCCcc-C-cc----ccccccCCEEECCCCCCCc-------------cCCcccCcchhhhhccccccc
Confidence 345677777777777652 1 11 2335677777777777763 122335677788888888777
Q ss_pred cchHHHHHH-HhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHHHHHhcCCCCCc
Q 012515 367 KADARDLGS-ALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLDTLSTLRRPPT 445 (462)
Q Consensus 367 ~~~~~~l~~-~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~L~ 445 (462)
. +++ .+..+++|++|++++|.|++ ++.+ ..+..+++|+.|++++|+++..... -...+.. .++|+
T Consensus 77 ~-----l~~~~~~~l~~L~~L~L~~N~i~~------~~~l-~~l~~l~~L~~L~l~~N~i~~~~~~-r~~~i~~-lp~L~ 142 (162)
T d1a9na_ 77 R-----IGEGLDQALPDLTELILTNNSLVE------LGDL-DPLASLKSLTYLCILRNPVTNKKHY-RLYVIYK-VPQVR 142 (162)
T ss_dssp E-----ECSCHHHHCTTCCEEECCSCCCCC------GGGG-GGGGGCTTCCEEECCSSGGGGSTTH-HHHHHHH-CTTCS
T ss_pred C-----CCccccccccccccceeccccccc------cccc-cccccccccchhhcCCCccccccch-HHHHHHH-CCCcC
Confidence 5 322 24567778888888887776 3221 3355667788888888877653211 0123444 24477
Q ss_pred EEE
Q 012515 446 SLS 448 (462)
Q Consensus 446 ~L~ 448 (462)
+||
T Consensus 143 ~LD 145 (162)
T d1a9na_ 143 VLD 145 (162)
T ss_dssp EET
T ss_pred eeC
Confidence 776
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.22 E-value=3.3e-12 Score=101.63 Aligned_cols=104 Identities=23% Similarity=0.270 Sum_probs=57.4
Q ss_pred cEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCc
Q 012515 260 ENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR 339 (462)
Q Consensus 260 ~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~ 339 (462)
+.|++++|.++. +. .+..++.|++|++++|.|.. .+..+ ..+++|++|++++|.+++.
T Consensus 1 R~L~Ls~n~l~~---------l~-~l~~l~~L~~L~ls~N~l~~-lp~~~-----~~l~~L~~L~l~~N~i~~l------ 58 (124)
T d1dcea3 1 RVLHLAHKDLTV---------LC-HLEQLLLVTHLDLSHNRLRA-LPPAL-----AALRCLEVLQASDNALENV------ 58 (124)
T ss_dssp SEEECTTSCCSS---------CC-CGGGGTTCCEEECCSSCCCC-CCGGG-----GGCTTCCEEECCSSCCCCC------
T ss_pred CEEEcCCCCCCC---------Cc-ccccCCCCCEEECCCCccCc-chhhh-----hhhhccccccccccccccc------
Confidence 356666666655 11 24555666666666666654 22222 2356666666666666641
Q ss_pred ccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCc
Q 012515 340 SGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIED 395 (462)
Q Consensus 340 ~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~ 395 (462)
..+. .+++|++|++++|+|++-. -...+..+++|+.|++++|++++
T Consensus 59 ----~~~~---~l~~L~~L~l~~N~i~~~~---~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 59 ----DGVA---NLPRLQELLLCNNRLQQSA---AIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp ----GGGT---TCSSCCEEECCSSCCCSSS---TTGGGGGCTTCCEEECTTSGGGG
T ss_pred ----Cccc---cccccCeEECCCCccCCCC---CchhhcCCCCCCEEECCCCcCCc
Confidence 1122 4466666666666666421 01245566666666666666653
No 30
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.20 E-value=2.9e-12 Score=110.53 Aligned_cols=88 Identities=23% Similarity=0.260 Sum_probs=38.4
Q ss_pred cCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCC
Q 012515 286 SSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNL 365 (462)
Q Consensus 286 ~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l 365 (462)
..+++|++|+|++|.+....... +..+++|++|+|++|+++...+ ..+.++++|++|+|++|+|
T Consensus 51 ~~l~~L~~L~L~~N~i~~~~~~~-----~~~~~~L~~L~Ls~N~l~~l~~-----------~~F~~l~~L~~L~L~~N~l 114 (192)
T d1w8aa_ 51 GRLPHLVKLELKRNQLTGIEPNA-----FEGASHIQELQLGENKIKEISN-----------KMFLGLHQLKTLNLYDNQI 114 (192)
T ss_dssp GGCTTCCEEECCSSCCCCBCTTT-----TTTCTTCCEEECCSCCCCEECS-----------SSSTTCTTCCEEECCSSCC
T ss_pred CCCceEeeeeccccccccccccc-----cccccccceeeeccccccccCH-----------HHHhCCCcccccccCCccc
Confidence 34455555555555544322221 1233455555555555543222 1122344555555555555
Q ss_pred CcchHHHHHHHhhcCCCCCEEeCCCCCC
Q 012515 366 CKADARDLGSALVHIPNLEILDISDNTI 393 (462)
Q Consensus 366 ~~~~~~~l~~~l~~~~~L~~L~Ls~N~l 393 (462)
+. .-+.+|..+++|++|+|++|++
T Consensus 115 ~~----i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 115 SC----VMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CE----ECTTSSTTCTTCCEEECTTCCB
T ss_pred cc----cCHHHhcCCccccccccccccc
Confidence 53 1122344455555555555544
No 31
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.19 E-value=2.7e-12 Score=110.77 Aligned_cols=132 Identities=18% Similarity=0.141 Sum_probs=100.4
Q ss_pred CccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCccccc
Q 012515 258 KIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKY 337 (462)
Q Consensus 258 ~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~ 337 (462)
..+.++.+++.++. ++..+ -+++++|+|++|.|+....... +..+++|++|+|++|.+....+
T Consensus 9 ~~~~v~Cs~~~L~~---------iP~~l--p~~l~~L~Ls~N~i~~~~~~~~----f~~l~~L~~L~L~~N~i~~~~~-- 71 (192)
T d1w8aa_ 9 EGTTVDCTGRGLKE---------IPRDI--PLHTTELLLNDNELGRISSDGL----FGRLPHLVKLELKRNQLTGIEP-- 71 (192)
T ss_dssp ETTEEECTTSCCSS---------CCSCC--CTTCSEEECCSCCCCSBCCSCS----GGGCTTCCEEECCSSCCCCBCT--
T ss_pred cCCEEEEeCCCcCc---------cCCCC--CCCCCEEEeCCCCCcccccccc----cCCCceEeeeeccccccccccc--
Confidence 45788899888876 22222 1589999999999975332222 3457899999999999986444
Q ss_pred CcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccE
Q 012515 338 DRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVE 417 (462)
Q Consensus 338 ~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~ 417 (462)
. .+..+++|++|+|++|+|+. .-+.+|.++++|++|+|++|.|+. ++. ..+..+++|++
T Consensus 72 ------~---~~~~~~~L~~L~Ls~N~l~~----l~~~~F~~l~~L~~L~L~~N~l~~------i~~--~~f~~l~~L~~ 130 (192)
T d1w8aa_ 72 ------N---AFEGASHIQELQLGENKIKE----ISNKMFLGLHQLKTLNLYDNQISC------VMP--GSFEHLNSLTS 130 (192)
T ss_dssp ------T---TTTTCTTCCEEECCSCCCCE----ECSSSSTTCTTCCEEECCSSCCCE------ECT--TSSTTCTTCCE
T ss_pred ------c---ccccccccceeeeccccccc----cCHHHHhCCCcccccccCCccccc------cCH--HHhcCCccccc
Confidence 3 33366899999999999996 123468899999999999999987 443 66788899999
Q ss_pred EEccCCCCCh
Q 012515 418 LYLENCELSG 427 (462)
Q Consensus 418 L~L~~n~l~~ 427 (462)
|+|++|.+..
T Consensus 131 l~L~~N~~~~ 140 (192)
T d1w8aa_ 131 LNLASNPFNC 140 (192)
T ss_dssp EECTTCCBCC
T ss_pred cccccccccc
Confidence 9999999865
No 32
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=6e-12 Score=105.18 Aligned_cols=134 Identities=14% Similarity=0.033 Sum_probs=84.6
Q ss_pred CCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCccc
Q 012515 256 IHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLS 335 (462)
Q Consensus 256 ~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 335 (462)
..++++|++++|.++. +...+..+++|++|+|++|.|..-. . +..+++|++|++++|.++...+
T Consensus 17 ~~~lr~L~L~~n~I~~---------i~~~~~~l~~L~~L~Ls~N~i~~l~--~-----~~~l~~L~~L~ls~N~i~~l~~ 80 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPV---------IENLGATLDQFDAIDFSDNEIRKLD--G-----FPLLRRLKTLLVNNNRICRIGE 80 (162)
T ss_dssp TTSCEEEECTTSCCCS---------CCCGGGGTTCCSEEECCSSCCCEEC--C-----CCCCSSCCEEECCSSCCCEECS
T ss_pred cCcCcEEECCCCCCCc---------cCccccccccCCEEECCCCCCCccC--C-----cccCcchhhhhcccccccCCCc
Confidence 4456777777777765 2223345678888888888887521 1 2456788888888888874222
Q ss_pred ccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchh-HHhHHHHHHhhcCCCCC
Q 012515 336 KYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDG-IRSLIPYFVQASERCNP 414 (462)
Q Consensus 336 ~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g-~~~l~~~l~~~l~~~~~ 414 (462)
..+. .+++|+.|++++|+|++-. . ...+..+++|++|++++|++++.. .+. ..+..+++
T Consensus 81 --------~~~~---~l~~L~~L~L~~N~i~~~~--~-l~~l~~l~~L~~L~l~~N~i~~~~~~r~------~~i~~lp~ 140 (162)
T d1a9na_ 81 --------GLDQ---ALPDLTELILTNNSLVELG--D-LDPLASLKSLTYLCILRNPVTNKKHYRL------YVIYKVPQ 140 (162)
T ss_dssp --------CHHH---HCTTCCEEECCSCCCCCGG--G-GGGGGGCTTCCEEECCSSGGGGSTTHHH------HHHHHCTT
T ss_pred --------cccc---cccccccceeccccccccc--c-ccccccccccchhhcCCCccccccchHH------HHHHHCCC
Confidence 1122 3467888888888887521 0 135677888888888888876521 110 12445578
Q ss_pred ccEEEccCCCCCh
Q 012515 415 LVELYLENCELSG 427 (462)
Q Consensus 415 L~~L~L~~n~l~~ 427 (462)
|+.|| +..++.
T Consensus 141 L~~LD--~~~i~~ 151 (162)
T d1a9na_ 141 VRVLD--FQKVKL 151 (162)
T ss_dssp CSEET--TEECCH
T ss_pred cCeeC--CCCCCH
Confidence 88776 445555
No 33
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=2.4e-13 Score=122.10 Aligned_cols=203 Identities=11% Similarity=0.053 Sum_probs=128.3
Q ss_pred CCcCEEEeccCCChHHHHHHHHHHHhcCCCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCC-CCCCCCCCc
Q 012515 197 SKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDI-SSFIENCPS 275 (462)
Q Consensus 197 ~~L~~L~L~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~-~~~~~~~~~ 275 (462)
+++++|++++|.+....... +.++++|++|++++|.+...... ..+..+..++++.+.. +.+..
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~----f~~l~~L~~L~ls~n~~~~~i~~-------~~f~~l~~l~~l~~~~~n~l~~---- 93 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGA----FSGFGDLEKIEISQNDVLEVIEA-------DVFSNLPKLHEIRIEKANNLLY---- 93 (242)
T ss_dssp SCCSEEEEESCCCCEECTTT----TTTCTTCCEEEEESCTTCCEECS-------SSEESCTTCCEEEEECCTTCCE----
T ss_pred CCCCEEECcCCcCCccChhH----hhccchhhhhhhccccccceeec-------cccccccccccccccccccccc----
Confidence 46899999999875433221 35689999999999977532111 0111267788888754 45544
Q ss_pred hhHHHHHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCC-CC
Q 012515 276 SVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSL-QS 354 (462)
Q Consensus 276 ~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l-~~ 354 (462)
.....+..+++|++|++++|.+........ ...+..+..+..+++.+....+ ..+. ++ ..
T Consensus 94 ----~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~----~~~l~~l~~~~~~n~~l~~i~~--------~~~~---~~~~~ 154 (242)
T d1xwdc1 94 ----INPEAFQNLPNLQYLLISNTGIKHLPDVHK----IHSLQKVLLDIQDNINIHTIER--------NSFV---GLSFE 154 (242)
T ss_dssp ----ECTTSEECCTTCCEEEEESCCCCSCCCCTT----TCBSSCEEEEEESCTTCCEECT--------TSST---TSBSS
T ss_pred ----cccccccccccccccccchhhhcccccccc----cccccccccccccccccccccc--------cccc---ccccc
Confidence 234556788999999999998875332211 2334556666667777664211 1122 22 47
Q ss_pred ccEEEccCCCCCcchHHHHHHHhhcCCCCCEE-eCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHH
Q 012515 355 LRLLNLRGNNLCKADARDLGSALVHIPNLEIL-DISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQL 433 (462)
Q Consensus 355 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L-~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l 433 (462)
++.|++++|+++. ++.......++.++ ++++|.|+. ++. ..+.++++|+.|++++|+|+...
T Consensus 155 l~~L~l~~n~l~~-----i~~~~~~~~~l~~~~~l~~n~l~~------l~~--~~f~~l~~L~~L~Ls~N~l~~l~---- 217 (242)
T d1xwdc1 155 SVILWLNKNGIQE-----IHNCAFNGTQLDELNLSDNNNLEE------LPN--DVFHGASGPVILDISRTRIHSLP---- 217 (242)
T ss_dssp CEEEECCSSCCCE-----ECTTTTTTCCEEEEECTTCTTCCC------CCT--TTTTTSCCCSEEECTTSCCCCCC----
T ss_pred ceeeecccccccc-----cccccccchhhhcccccccccccc------ccH--HHhcCCCCCCEEECCCCcCCccC----
Confidence 8899999999986 44444455666666 467788876 442 45778899999999999988631
Q ss_pred HHHHhcCCCCCcEEEccC
Q 012515 434 LDTLSTLRRPPTSLSIAD 451 (462)
Q Consensus 434 ~~~l~~l~~~L~~L~Ls~ 451 (462)
...+..+ +.|+.+++.+
T Consensus 218 ~~~~~~l-~~L~~l~~~~ 234 (242)
T d1xwdc1 218 SYGLENL-KKLRARSTYN 234 (242)
T ss_dssp SSSCTTC-CEEESSSEES
T ss_pred HHHHcCC-cccccCcCCC
Confidence 1234442 3355555543
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.06 E-value=5.3e-12 Score=109.29 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=87.0
Q ss_pred HHHhhcCCCCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEc
Q 012515 281 LVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNL 360 (462)
Q Consensus 281 l~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L 360 (462)
+...+..+++|++|+|++|.|.+- ..+. .+++|++|++++|.++...+ +. . .+.+|+.|++
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~i--~~l~-----~l~~L~~L~Ls~N~i~~i~~------~~---~---~~~~L~~L~l 100 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEKI--SSLS-----GMENLRILSLGRNLIKKIEN------LD---A---VADTLEELWI 100 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESCC--CCHH-----HHTTCCEEECCEEEECSCSS------HH---H---HHHHCCEEEC
T ss_pred hhhHHhcccccceeECcccCCCCc--cccc-----CCccccChhhcccccccccc------cc---c---cccccccccc
Confidence 445566678888888888877652 1221 24778888888888764211 11 1 1146888888
Q ss_pred cCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhH------HHHH
Q 012515 361 RGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGV------SQLL 434 (462)
Q Consensus 361 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~------~~l~ 434 (462)
++|+|++ + +.+..+++|+.|++++|.|++ ++.+ ..+..+++|+.|++++|++..... ..-.
T Consensus 101 ~~N~i~~-----l-~~~~~l~~L~~L~L~~N~i~~------~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~ 167 (198)
T d1m9la_ 101 SYNQIAS-----L-SGIEKLVNLRVLYMSNNKITN------WGEI-DKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp SEEECCC-----H-HHHHHHHHSSEEEESEEECCC------HHHH-HHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHH
T ss_pred ccccccc-----c-ccccccccccccccccchhcc------cccc-ccccCCCccceeecCCCccccCcccccchhhHHH
Confidence 8888885 3 346667788888888888876 3322 345667888888888887544211 0111
Q ss_pred HHHhcCCCCCcEEEccCCCCC
Q 012515 435 DTLSTLRRPPTSLSIADNNLG 455 (462)
Q Consensus 435 ~~l~~l~~~L~~L~Ls~N~l~ 455 (462)
..+..+ ++|+.|| +..++
T Consensus 168 ~vi~~l-p~L~~LD--~~~I~ 185 (198)
T d1m9la_ 168 EVVKRL-PNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHC-SSCCEES--SGGGT
T ss_pred HHHHHC-CCcCEeC--CccCC
Confidence 234453 4588876 44444
No 35
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.01 E-value=4e-10 Score=105.99 Aligned_cols=56 Identities=25% Similarity=0.318 Sum_probs=44.4
Q ss_pred CCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHHHHHhcCCCCCcEEEccCCCCCC
Q 012515 380 IPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLDTLSTLRRPPTSLSIADNNLGR 456 (462)
Q Consensus 380 ~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L~Ls~N~l~~ 456 (462)
+++|++|++++|.|+. +| . ..++|+.|++++|+|+. +++ ..++|++|++++|+|+.
T Consensus 283 ~~~L~~L~Ls~N~l~~------lp---~---~~~~L~~L~L~~N~L~~-----l~~----~~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLIE------LP---A---LPPRLERLIASFNHLAE-----VPE----LPQNLKQLHVEYNPLRE 338 (353)
T ss_dssp CTTCCEEECCSSCCSC------CC---C---CCTTCCEEECCSSCCSC-----CCC----CCTTCCEEECCSSCCSS
T ss_pred CCCCCEEECCCCccCc------cc---c---ccCCCCEEECCCCcCCc-----ccc----ccCCCCEEECcCCcCCC
Confidence 4689999999999886 54 2 24789999999999987 332 24569999999999974
No 36
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=9e-11 Score=104.79 Aligned_cols=182 Identities=19% Similarity=0.201 Sum_probs=124.4
Q ss_pred CCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCchhHHHH-HHhhcCCCCCCEEecCC-CCCC
Q 012515 225 ETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVEL-VSFLSSGRSLCSLKLRH-CHLD 302 (462)
Q Consensus 225 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l-~~~l~~l~~L~~L~Ls~-n~l~ 302 (462)
+++++|++++|.++......+. .+++|++|++++|.+.. .+ ...+..++.++++.+.. |.+.
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~--------~l~~L~~L~ls~n~~~~--------~i~~~~f~~l~~l~~l~~~~~n~l~ 92 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFS--------GFGDLEKIEISQNDVLE--------VIEADVFSNLPKLHEIRIEKANNLL 92 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTT--------TCTTCCEEEEESCTTCC--------EECSSSEESCTTCCEEEEECCTTCC
T ss_pred CCCCEEECcCCcCCccChhHhh--------ccchhhhhhhccccccc--------eeecccccccccccccccccccccc
Confidence 4899999999999743332332 27899999999998765 11 23456788999998764 5666
Q ss_pred hhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCC-
Q 012515 303 RDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIP- 381 (462)
Q Consensus 303 ~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~- 381 (462)
...+.. +..+++|++|++++|.+....+ ......+..+..+...++.++.-. ...+..++
T Consensus 93 ~~~~~~-----~~~l~~L~~l~l~~~~l~~~~~----------~~~~~~l~~l~~~~~~n~~l~~i~----~~~~~~~~~ 153 (242)
T d1xwdc1 93 YINPEA-----FQNLPNLQYLLISNTGIKHLPD----------VHKIHSLQKVLLDIQDNINIHTIE----RNSFVGLSF 153 (242)
T ss_dssp EECTTS-----EECCTTCCEEEEESCCCCSCCC----------CTTTCBSSCEEEEEESCTTCCEEC----TTSSTTSBS
T ss_pred cccccc-----ccccccccccccchhhhccccc----------cccccccccccccccccccccccc----ccccccccc
Confidence 644443 3567899999999999874211 122234467777778888887521 22344443
Q ss_pred CCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEE-EccCCCCChhhHHHHH-HHHhcCCCCCcEEEccCCCCCC
Q 012515 382 NLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVEL-YLENCELSGRGVSQLL-DTLSTLRRPPTSLSIADNNLGR 456 (462)
Q Consensus 382 ~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L-~L~~n~l~~~~~~~l~-~~l~~l~~~L~~L~Ls~N~l~~ 456 (462)
.++.|++++|.++. ++ .......++.++ .+++|+++. ++ ..+.. .++|++|++++|+|+.
T Consensus 154 ~l~~L~l~~n~l~~------i~---~~~~~~~~l~~~~~l~~n~l~~-----l~~~~f~~-l~~L~~L~Ls~N~l~~ 215 (242)
T d1xwdc1 154 ESVILWLNKNGIQE------IH---NCAFNGTQLDELNLSDNNNLEE-----LPNDVFHG-ASGPVILDISRTRIHS 215 (242)
T ss_dssp SCEEEECCSSCCCE------EC---TTTTTTCCEEEEECTTCTTCCC-----CCTTTTTT-SCCCSEEECTTSCCCC
T ss_pred cceeeecccccccc------cc---cccccchhhhcccccccccccc-----ccHHHhcC-CCCCCEEECCCCcCCc
Confidence 78899999999986 43 222334565555 568888887 32 23555 4669999999999984
No 37
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.83 E-value=4.7e-11 Score=103.14 Aligned_cols=130 Identities=26% Similarity=0.280 Sum_probs=91.3
Q ss_pred CCCEEecCCC--CCChhhHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCc
Q 012515 290 SLCSLKLRHC--HLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCK 367 (462)
Q Consensus 290 ~L~~L~Ls~n--~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~ 367 (462)
.++.+++++. .+.. ....+ ..+++|++|+|++|.|+.. ..+. ++++|+.|+|++|.|++
T Consensus 24 ~~~~~~l~~~~~~i~~-l~~sl-----~~L~~L~~L~Ls~n~I~~i----------~~l~---~l~~L~~L~Ls~N~i~~ 84 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEK-MDATL-----STLKACKHLALSTNNIEKI----------SSLS---GMENLRILSLGRNLIKK 84 (198)
T ss_dssp TCSCEECCBCCTTCCC-CHHHH-----HHTTTCCEEECSEEEESCC----------CCHH---HHTTCCEEECCEEEECS
T ss_pred ccceeeeecccCchhh-hhhHH-----hcccccceeECcccCCCCc----------cccc---CCccccChhhccccccc
Confidence 4556666654 2332 22333 2368999999999998851 1233 45789999999999986
Q ss_pred chHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChhhHHHHHHHHhcCCCCCcEE
Q 012515 368 ADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLLDTLSTLRRPPTSL 447 (462)
Q Consensus 368 ~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~L~~L 447 (462)
++.....+++|+.|++++|.|++ ++. +..+++|+.|++++|+|+..+. ...+..+ ++|++|
T Consensus 85 -----i~~~~~~~~~L~~L~l~~N~i~~------l~~----~~~l~~L~~L~L~~N~i~~~~~---~~~l~~l-~~L~~L 145 (198)
T d1m9la_ 85 -----IENLDAVADTLEELWISYNQIAS------LSG----IEKLVNLRVLYMSNNKITNWGE---IDKLAAL-DKLEDL 145 (198)
T ss_dssp -----CSSHHHHHHHCCEEECSEEECCC------HHH----HHHHHHSSEEEESEEECCCHHH---HHHHTTT-TTCSEE
T ss_pred -----ccccccccccccccccccccccc------ccc----ccccccccccccccchhccccc---cccccCC-Ccccee
Confidence 33333344579999999999997 432 3344789999999999988421 2456664 559999
Q ss_pred EccCCCCCCc
Q 012515 448 SIADNNLGRF 457 (462)
Q Consensus 448 ~Ls~N~l~~~ 457 (462)
++++|++...
T Consensus 146 ~L~~N~l~~~ 155 (198)
T d1m9la_ 146 LLAGNPLYND 155 (198)
T ss_dssp EECSSHHHHH
T ss_pred ecCCCccccC
Confidence 9999987543
No 38
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=3.7e-09 Score=87.16 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=70.8
Q ss_pred CCCCEEecCCCCCChhhHHHHHHHHhhCCCCccEEEecCCC-CCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCc
Q 012515 289 RSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNS-IGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCK 367 (462)
Q Consensus 289 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~-l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~ 367 (462)
...+.++.+++.+. ..+..+ ...++|++|++++|+ ++...+ ..+.++++|+.|+|++|+|+.
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l-----~~l~~l~~L~l~~n~~l~~i~~-----------~~f~~l~~L~~L~Ls~N~l~~ 70 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHL-----PGAENLTELYIENQQHLQHLEL-----------RDLRGLGELRNLTIVKSGLRF 70 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTS-----CSCSCCSEEECCSCSSCCEECG-----------GGSCSCCCCSEEECCSSCCCE
T ss_pred CCCCeEEecCCCCc-cCcccc-----cCccccCeeecCCCccccccCc-----------hhhccccccCcceeeccccCC
Confidence 35566777766553 444432 445778888887664 664222 223366788888888888886
Q ss_pred chHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCC
Q 012515 368 ADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELS 426 (462)
Q Consensus 368 ~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~ 426 (462)
- -+.+|..+++|++|+|++|.|+. ++. ..+.. .+|+.|+|++|++.
T Consensus 71 i----~~~~f~~l~~L~~L~Ls~N~l~~------l~~--~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 71 V----APDAFHFTPRLSRLNLSFNALES------LSW--KTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp E----CTTGGGSCSCCCEEECCSSCCSC------CCS--TTTCS-CCCCEEECCSSCCC
T ss_pred c----ccccccccccccceeccCCCCcc------cCh--hhhcc-ccccccccCCCccc
Confidence 1 24567888888888888888875 442 33333 46888888888875
No 39
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58 E-value=2.3e-08 Score=82.27 Aligned_cols=108 Identities=21% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCC-CCChhhHHHHHHHHhhCCCCccEEEecCCCCCCccc
Q 012515 257 HKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHC-HLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLS 335 (462)
Q Consensus 257 ~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n-~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 335 (462)
...+.++.+++.+.+ .+..+..+++|++|++++| .++...... +..+++|+.|+|++|+|+...+
T Consensus 8 ~~~~~l~c~~~~~~~---------~p~~l~~l~~l~~L~l~~n~~l~~i~~~~-----f~~l~~L~~L~Ls~N~l~~i~~ 73 (156)
T d2ifga3 8 HGSSGLRCTRDGALD---------SLHHLPGAENLTELYIENQQHLQHLELRD-----LRGLGELRNLTIVKSGLRFVAP 73 (156)
T ss_dssp SSSSCEECCSSCCCT---------TTTTSCSCSCCSEEECCSCSSCCEECGGG-----SCSCCCCSEEECCSSCCCEECT
T ss_pred CCCCeEEecCCCCcc---------CcccccCccccCeeecCCCccccccCchh-----hccccccCcceeeccccCCccc
Confidence 445667777776665 3445667789999999766 477644433 3567899999999999886433
Q ss_pred ccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCC
Q 012515 336 KYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIE 394 (462)
Q Consensus 336 ~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~ 394 (462)
.++. ++++|++|+|++|+|+. ++.......+|+.|+|++|++.
T Consensus 74 --------~~f~---~l~~L~~L~Ls~N~l~~-----l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 74 --------DAFH---FTPRLSRLNLSFNALES-----LSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp --------TGGG---SCSCCCEEECCSSCCSC-----CCSTTTCSCCCCEEECCSSCCC
T ss_pred --------cccc---ccccccceeccCCCCcc-----cChhhhccccccccccCCCccc
Confidence 3344 56899999999999985 6665555668999999999985
No 40
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.32 E-value=3.9e-07 Score=84.84 Aligned_cols=139 Identities=23% Similarity=0.239 Sum_probs=92.0
Q ss_pred CCccEEEccCCCCChhHHHHHHHHHhcccccCCCccEEecCCCCCCCCCCchhHHHHHHhhcCCCCCCEEecCCCCCChh
Q 012515 225 ETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRD 304 (462)
Q Consensus 225 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~~l~~l~~L~~L~Ls~n~l~~~ 304 (462)
.++++|+|+++.++ .+... .++|++|++++|.++... . ...+|+.|++++|.++.-
T Consensus 38 ~~l~~LdLs~~~L~---------~lp~~---~~~L~~L~Ls~N~l~~lp---------~---~~~~L~~L~l~~n~l~~l 93 (353)
T d1jl5a_ 38 RQAHELELNNLGLS---------SLPEL---PPHLESLVASCNSLTELP---------E---LPQSLKSLLVDNNNLKAL 93 (353)
T ss_dssp HTCSEEECTTSCCS---------CCCSC---CTTCSEEECCSSCCSSCC---------C---CCTTCCEEECCSSCCSCC
T ss_pred cCCCEEEeCCCCCC---------CCCCC---CCCCCEEECCCCCCcccc---------c---chhhhhhhhhhhcccchh
Confidence 36888999988876 12221 467888888888887622 1 235788888888877641
Q ss_pred hHHHHHHHHhhCCCCccEEEecCCCCCCcccccCcccHHHhhhCCCCCCCccEEEccCCCCCcchHHHHHHHhhcCCCCC
Q 012515 305 FGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKADARDLGSALVHIPNLE 384 (462)
Q Consensus 305 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~l~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 384 (462)
. .-.+.|++|++++|.+... .....++.|+.|++++|.++.. + .....+.
T Consensus 94 ~---------~lp~~L~~L~L~~n~l~~l-------------p~~~~l~~L~~L~l~~~~~~~~-----~---~~~~~l~ 143 (353)
T d1jl5a_ 94 S---------DLPPLLEYLGVSNNQLEKL-------------PELQNSSFLKIIDVDNNSLKKL-----P---DLPPSLE 143 (353)
T ss_dssp C---------SCCTTCCEEECCSSCCSSC-------------CCCTTCTTCCEEECCSSCCSCC-----C---CCCTTCC
T ss_pred h---------hhccccccccccccccccc-------------cchhhhccceeecccccccccc-----c---ccccccc
Confidence 1 1124688888888887641 1122557888888888877652 1 2245677
Q ss_pred EEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCCh
Q 012515 385 ILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSG 427 (462)
Q Consensus 385 ~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~ 427 (462)
.+++..+...+ . ..+..++.++.+.+++|.+..
T Consensus 144 ~l~~~~~~~~~------~----~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 144 FIAAGNNQLEE------L----PELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp EEECCSSCCSS------C----CCCTTCTTCCEEECCSSCCSS
T ss_pred chhhccccccc------c----ccccccccceecccccccccc
Confidence 77777776554 2 345566788888888887665
No 41
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31 E-value=4.2e-07 Score=74.98 Aligned_cols=16 Identities=31% Similarity=0.275 Sum_probs=9.2
Q ss_pred CCCccEEEecCCCCCC
Q 012515 317 SSSLSILDLSGNSIGG 332 (462)
Q Consensus 317 ~~~L~~L~Ls~n~l~~ 332 (462)
+++|++|+|++|+|++
T Consensus 64 ~~~L~~L~Ls~N~i~~ 79 (162)
T d1koha1 64 IPELLSLNLSNNRLYR 79 (162)
T ss_dssp CTTCCCCCCCSSCCCC
T ss_pred CCCCCEeeCCCccccC
Confidence 4556666666666553
No 42
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27 E-value=4.7e-08 Score=80.89 Aligned_cols=94 Identities=26% Similarity=0.304 Sum_probs=65.3
Q ss_pred CCCCccEEEccCCCCCcchHHHHHHHhhcCCCCCEEeCCCCCCCchhHHhHHHHHHhhcCCCCCccEEEccCCCCChh--
Q 012515 351 SLQSLRLLNLRGNNLCKADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGR-- 428 (462)
Q Consensus 351 ~l~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~N~l~~~g~~~l~~~l~~~l~~~~~L~~L~L~~n~l~~~-- 428 (462)
.+++|++|+|++|+|++-. .+...+..+++|+.|++++|.|++ ++.+ ..+. ...|+.|++++|+++..
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~--~~~~~~~~l~~L~~L~Ls~N~i~~------l~~l-~~l~-~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLD--DMSSIVQKAPNLKILNLSGNELKS------EREL-DKIK-GLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCS--GGGTHHHHSTTCCCCCCTTSCCCC------GGGH-HHHT-TCCCSSCCCTTSTTSSSSS
T ss_pred hCCCCCEeeCCCccccCCc--hhHHHHhhCCcccccccccCcccc------chhh-hhhh-ccccceeecCCCCcCcCcc
Confidence 4588999999999998632 244567789999999999999998 4332 2233 35799999999998752
Q ss_pred -hHHHHHHHHhcCCCCCcEEEccCCCCCCc
Q 012515 429 -GVSQLLDTLSTLRRPPTSLSIADNNLGRF 457 (462)
Q Consensus 429 -~~~~l~~~l~~l~~~L~~L~Ls~N~l~~~ 457 (462)
........+.. -++|+.|| ++++...
T Consensus 133 ~~~~y~~~i~~~-~P~L~~LD--g~~v~p~ 159 (162)
T d1koha1 133 DQSTYISAIRER-FPKLLRLD--GHELPPP 159 (162)
T ss_dssp SHHHHHHHHHTT-STTCCEET--TEECCCC
T ss_pred cchhHHHHHHHH-CCCCCEEC--cCCCcCC
Confidence 12233444555 45699887 6666443
No 43
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.15 E-value=0.78 Score=32.58 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=44.9
Q ss_pred CcchhccCchHHHHHHHhcCChhhhhhhhhhCCCCCCCCCCCCCccccccccccccCCchHHHHHHHhchhcCCCC----
Q 012515 25 VIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRDGDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTD---- 100 (462)
Q Consensus 25 ~~~~l~~lp~~l~~~l~~~l~~~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~r~~~~~~~w~~~~~~~~~~~~~---- 100 (462)
...-+..||.|+...|+..|++.-+-++. .+ .++|+.-+.+ +..|+..+...|.....
T Consensus 15 ~~D~i~~LP~Eil~~Ils~Ld~~dL~~~~--------------~v-cr~w~~l~~~---~~lW~~~~~r~~~~~~~~~~~ 76 (102)
T d2ovrb1 15 QRDFISLLPKELALYVLSFLEPKDLLQAA--------------QT-CRYWRILAED---NLLWREKCKEEGIDEPLHIKR 76 (102)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHT--------------TS-CHHHHHHHTC---SHHHHHHHTTTTCCSCCCCCC
T ss_pred ccCChhhCCHHHHHHHHHcCCHHHHHHHH--------------HH-HHHHHHHHCC---HHHHHHHHHHcCCCCchHHHh
Confidence 44557889999999999999987665554 11 4444443332 35899888765533211
Q ss_pred ------CCCCCchHHHHHH
Q 012515 101 ------QIEPVDWQQRYWE 113 (462)
Q Consensus 101 ------~~~~~~~~~~~~~ 113 (462)
......|++.|..
T Consensus 77 ~~~~~~~~~~~~WK~~Y~~ 95 (102)
T d2ovrb1 77 RKVIKPGFIHSPWKSAYIR 95 (102)
T ss_dssp --CCSSCCCCCHHHHHHHH
T ss_pred hhcccCCCCCcCHHHHHHH
Confidence 1124568888753
No 44
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.31 E-value=4.5 Score=22.97 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=19.0
Q ss_pred hccCchHHHHHHHhcCChhhhhhh
Q 012515 29 VYELPADLFDILLTCLPPLALQKL 52 (462)
Q Consensus 29 l~~lp~~l~~~l~~~l~~~~l~~~ 52 (462)
++.||.|++.+|+..||+.-+-++
T Consensus 1 f~~LP~eil~~If~~L~~~dl~~~ 24 (41)
T d1fs1a1 1 WDSLPDELLLGIFSCLCLPELLKV 24 (41)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHH
T ss_pred CCcCCHHHHHHHHHcCCHHHHHHH
Confidence 368999999999999997655444
No 45
>d1lm8v_ b.3.3.1 (V:) VHL {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.50 E-value=12 Score=28.21 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=26.4
Q ss_pred CCccHHHHHHHHHHHHHccCCCCcchhccCchHHHHHHH
Q 012515 3 KAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILL 41 (462)
Q Consensus 3 ~~p~L~~l~~~~~~~~l~~~~~~~~~l~~lp~~l~~~l~ 41 (462)
|-.||.|.|+|.| .+|+++++ +..|+ +|..|-..|.
T Consensus 95 Pv~tLkE~cl~~v-r~l~~~~d-~~~Le-Ip~~L~~dl~ 130 (150)
T d1lm8v_ 95 PVYTLKERCLQVV-RSLVKPEN-YRRLD-IVRSLYEDLE 130 (150)
T ss_dssp CCCCHHHHHHHHH-HHHSCGGG-GGGSC-SCHHHHHHHH
T ss_pred cccCHHHHHHHHH-HHHcCccc-ccccc-ccHHHHHHHH
Confidence 3479999999965 77888765 44455 9988876654
No 46
>d2izva1 a.271.1.1 (A:386-429) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.73 E-value=10 Score=21.88 Aligned_cols=25 Identities=16% Similarity=0.068 Sum_probs=17.3
Q ss_pred CccHHHHHHHHHHHHHccCCCCcchhccCc
Q 012515 4 APSLISLAALAVKRELLLGDDVIPYVYELP 33 (462)
Q Consensus 4 ~p~L~~l~~~~~~~~l~~~~~~~~~l~~lp 33 (462)
|-||+.||.-.|.+.. .....+.||
T Consensus 1 pfSLQhLCR~~I~~~t-----~~d~I~~LP 25 (44)
T d2izva1 1 PFSLQHICRTVICNCT-----TYDGIDALP 25 (44)
T ss_dssp CCCHHHHHHHHHHHHS-----CHHHHHTSS
T ss_pred CcCHHHHHHHHHHHcC-----CcCCcccCC
Confidence 5799999999877664 333455555
No 47
>d2c9wa1 a.271.1.1 (A:149-198) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.17 E-value=21 Score=21.15 Aligned_cols=14 Identities=36% Similarity=0.567 Sum_probs=11.6
Q ss_pred ccHHHHHHHHHHHH
Q 012515 5 PSLISLAALAVKRE 18 (462)
Q Consensus 5 p~L~~l~~~~~~~~ 18 (462)
|||+.||.-.|-+.
T Consensus 13 pSLQHLCR~~In~~ 26 (50)
T d2c9wa1 13 PSLQHLCRLTINKC 26 (50)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhc
Confidence 79999999887554
Done!