BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012517
(462 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32746|PYRD_ARATH Dihydroorotate dehydrogenase (quinone), mitochondrial
OS=Arabidopsis thaliana GN=PYRD PE=1 SV=2
Length = 460
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/458 (83%), Positives = 414/458 (90%), Gaps = 8/458 (1%)
Query: 5 KILRDFSYRRVISSTLGRSRHCFSSSSSSSSSSAAYAAPKIPHFSKRGRLLTGATTLGLV 64
K R+F +RRV S+ LG +R+C SS A +APK+PHFSKRGR+LTGAT +GL
Sbjct: 11 KWAREFLFRRVSSNPLGATRNC-------SSVPGASSAPKVPHFSKRGRILTGAT-IGLA 62
Query: 65 IATGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPA 124
IA GAYVST DEATFCGWLF+ATK+VNPFFALLDAE AH LAVSAAARGWVPREKRPDPA
Sbjct: 63 IAGGAYVSTADEATFCGWLFNATKVVNPFFALLDAEFAHKLAVSAAARGWVPREKRPDPA 122
Query: 125 ILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRL 184
ILGLEVWGRKFSNP+GLAAGFDKNAEA EGLLG+GFGFVEVGSVTPVPQEGNPKPRIFRL
Sbjct: 123 ILGLEVWGRKFSNPIGLAAGFDKNAEATEGLLGMGFGFVEVGSVTPVPQEGNPKPRIFRL 182
Query: 185 RQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGV 244
QEGAIINRCGFNSEGIV VAKRLGAQHGKR L ETS TSSSP+D+VK GGK+GPGILGV
Sbjct: 183 SQEGAIINRCGFNSEGIVVVAKRLGAQHGKRMLAETSATSSSPSDDVKPGGKSGPGILGV 242
Query: 245 NIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAA 304
N+GKNKTSEDAAADYVQGVH LSQYADYLVINVSSPNT GLRMLQGRKQLKDLVKKVQAA
Sbjct: 243 NLGKNKTSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAA 302
Query: 305 RDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV 364
RDEMQWG+EGPPPLLVKIAPDLS+ +LEDIAAVA+AL LDGLIISNTT+SRPD VS NPV
Sbjct: 303 RDEMQWGDEGPPPLLVKIAPDLSRGELEDIAAVALALHLDGLIISNTTVSRPDAVSNNPV 362
Query: 365 AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYT 424
A ETGGLSGKPL +LS N+L++MY LTRGKIPLIGCGG+SSGEDAY+KIRAGATLVQLYT
Sbjct: 363 ATETGGLSGKPLFALSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQLYT 422
Query: 425 AFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462
FAYGGPALIPQIK EL +CLERDGFKSI EA+GAD+R
Sbjct: 423 GFAYGGPALIPQIKEELVKCLERDGFKSIHEAIGADHR 460
>sp|Q63707|PYRD_RAT Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Rattus
norvegicus GN=Dhodh PE=1 SV=1
Length = 395
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/379 (53%), Positives = 262/379 (69%), Gaps = 20/379 (5%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L+ LLD E AH LAV + G +PR D +L ++V G KF NP+G+AA
Sbjct: 36 FYAEYLMPGLQRLLDPESAHRLAVRVTSLGLLPRATFQDSDMLEVKVLGHKFRNPVGIAA 95
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDKN EAV+GL LGFGFVEVGSVTP PQEGNP+PR+FRL ++ A+INR GFNS G+
Sbjct: 96 GFDKNGEAVDGLYKLGFGFVEVGSVTPQPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSV 155
Query: 204 VAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGV 263
V RL A+ K+ ++ A G LG+N+GKNKTSEDAAADY +GV
Sbjct: 156 VEHRLRARQQKQA-------------QLTADGLP----LGINLGKNKTSEDAAADYAEGV 198
Query: 264 HTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA 323
TL ADYLV+NVSSPNT GLR LQG+ +L+ L+ KV RD ++ + P +LVKIA
Sbjct: 199 RTLGPLADYLVVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRK--PAVLVKIA 256
Query: 324 PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNI 383
PDL+ +D EDIA+VA L +DGLI++NTT+SRP + + + ETGGLSGKPL LS
Sbjct: 257 PDLTAQDKEDIASVARELGIDGLIVTNTTVSRPVGL-QGALRSETGGLSGKPLRDLSTQT 315
Query: 384 LKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAE 443
++EMY LT+G+IP+IG GG+SSG+DA KI+AGA+LVQLYTA + GP ++ ++K EL
Sbjct: 316 IREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEA 375
Query: 444 CLERDGFKSIIEAVGADYR 462
L+ GF ++ +A+GAD+R
Sbjct: 376 LLKERGFTTVTDAIGADHR 394
>sp|O35435|PYRD_MOUSE Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Mus
musculus GN=Dhodh PE=2 SV=2
Length = 395
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/415 (50%), Positives = 275/415 (66%), Gaps = 30/415 (7%)
Query: 51 RGRLLTGATTLGL--VIATGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHTLAVS 108
R R L A LG ++ T +T D+ + +L A + LLD E AH LAV
Sbjct: 7 RKRALDAAIILGGGGLLFTSYLTATGDDHFYAEYLMPALQ------RLLDPESAHRLAVR 60
Query: 109 AAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSV 168
+ G +PR D +L + V G KF NP+G+AAGFDK+ EAV+GL LGFGFVEVGSV
Sbjct: 61 VISLGLLPRATFQDSNMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKLGFGFVEVGSV 120
Query: 169 TPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPN 228
TP PQEGNP+PR+FRL ++ A+INR GFNS G+ AV RL A+ K +T T+
Sbjct: 121 TPQPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSAVEHRLRARQQK----QTQLTTD--- 173
Query: 229 DEVKAGGKAGPGI-LGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRM 287
G+ LG+N+GKNKTS DAAADYV+GV L ADYLV+NVSSPNT GLR
Sbjct: 174 -----------GLPLGINLGKNKTSVDAAADYVEGVRILGPLADYLVVNVSSPNTAGLRS 222
Query: 288 LQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLI 347
LQG+ +L+ L+ KV RD ++ ++ P +LVKIAPDL+ +D EDIA+VA L +DGLI
Sbjct: 223 LQGKTELRRLLSKVLQERDALKGPQK--PAVLVKIAPDLTAQDKEDIASVARELGIDGLI 280
Query: 348 ISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGE 407
I+NTT+SRP + + + ETGGLSGKPL LS ++EMY LT+G IP+IG GG+SSG+
Sbjct: 281 ITNTTVSRPVGL-QGALRSETGGLSGKPLRDLSTQTIREMYALTQGTIPIIGVGGVSSGQ 339
Query: 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462
DA KI+AGA+LVQLYTA + GP ++ ++K EL L+ GF ++ +A+G D+R
Sbjct: 340 DALEKIQAGASLVQLYTALTFLGPPVVARVKRELEALLKERGFNTVTDAIGVDHR 394
>sp|Q02127|PYRD_HUMAN Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Homo
sapiens GN=DHODH PE=1 SV=3
Length = 395
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/380 (51%), Positives = 255/380 (67%), Gaps = 22/380 (5%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L+ LLD E AH LAV + G +PR + D +L + V G KF NP+G+AA
Sbjct: 36 FYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAA 95
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDK+ EAV+GL +GFGFVE+GSVTP PQEGNP+PR+FRL ++ A+INR GFNS G+
Sbjct: 96 GFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSV 155
Query: 204 VAKRLGAQHGKR-KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQG 262
V RL A+ K+ KL E LGVN+GKNKTS DAA DY +G
Sbjct: 156 VEHRLRARQQKQAKLTEDGLP------------------LGVNLGKNKTSVDAAEDYAEG 197
Query: 263 VHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322
V L ADYLV+NVSSPNT GLR LQG+ +L+ L+ KV RD ++ P +LVKI
Sbjct: 198 VRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHR--PAVLVKI 255
Query: 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNN 382
APDL+ +D EDIA+V L +DGLI++NTT+SRP + + + ETGGLSGKPL LS
Sbjct: 256 APDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGL-QGALRSETGGLSGKPLRDLSTQ 314
Query: 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442
++EMY LT+G++P+IG GG+SSG+DA KIRAGA+LVQLYTA + GP ++ ++K EL
Sbjct: 315 TIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELE 374
Query: 443 ECLERDGFKSIIEAVGADYR 462
L+ GF + +A+GAD+R
Sbjct: 375 ALLKEQGFGGVTDAIGADHR 394
>sp|Q5E9W3|PYRD_BOVIN Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Bos taurus
GN=DHODH PE=1 SV=1
Length = 395
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/380 (50%), Positives = 253/380 (66%), Gaps = 22/380 (5%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L+ LLD E AH LAV + G +PR D +L + V G KF NP+G+AA
Sbjct: 36 FYAELLMPSLQRLLDPETAHRLAVRFTSLGLLPRTTFQDSDMLEVRVLGHKFRNPVGIAA 95
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDK+ EAV+GL +GFGFVE+GSVTP PQEGNP+PR+FRL ++ AIINR GFNS G+
Sbjct: 96 GFDKHGEAVDGLYKMGFGFVEIGSVTPEPQEGNPRPRVFRLPEDQAIINRYGFNSHGLSV 155
Query: 204 VAKRLGA-QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQG 262
V RL A Q + +L E LG+N+GKNKTS DAA+DY +G
Sbjct: 156 VEHRLRARQQTQARLTEDGLP------------------LGINLGKNKTSVDAASDYAEG 197
Query: 263 VHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322
V L ADYLV+NVSSPNT GLR LQG+ +L+ L+ KV RD ++ + P +LVKI
Sbjct: 198 VRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHK--PAVLVKI 255
Query: 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNN 382
APDL+ +D EDIA+V L +DGLI++N+T+SRP + + + E GGLSGKPL LS
Sbjct: 256 APDLTAQDKEDIASVVRELGIDGLIVTNSTVSRPASL-QGALRSEPGGLSGKPLRDLSTQ 314
Query: 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442
++EMY LT+G++P++G GG+SSG+DA KIRAGA+LVQLYTA Y GP ++ +K EL
Sbjct: 315 TIREMYALTQGRVPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELE 374
Query: 443 ECLERDGFKSIIEAVGADYR 462
L+ GF + +A+GAD+R
Sbjct: 375 ALLKEQGFARVTDAIGADHR 394
>sp|A8HZX8|PYRD_AZOC5 Dihydroorotate dehydrogenase (quinone) OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=pyrD PE=3
SV=1
Length = 356
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/374 (51%), Positives = 248/374 (66%), Gaps = 23/374 (6%)
Query: 89 LVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKN 148
LV PF L E AH L++ A +G VP ++ P +L VW F NP+GLAAGFDK+
Sbjct: 6 LVRPFLPLFTPEQAHGLSIRALKKGLVPADRSPADPVLRTRVWNIDFPNPVGLAAGFDKD 65
Query: 149 AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRL 208
AE ++ LL LGFGFVE GSVTP PQ GNPKPR+FRL ++ +INR GFNS+G+ +L
Sbjct: 66 AEIIDPLLSLGFGFVEAGSVTPRPQPGNPKPRLFRLDEDEGVINRFGFNSQGLAPFIYQL 125
Query: 209 GAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268
G + KA G PGI+G N+GKNK +EDA+ DYV GV +
Sbjct: 126 GKR--------------------KAAGL--PGIVGANVGKNKETEDASEDYVAGVSATCR 163
Query: 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328
ADY+V NVSSPNTPGLR+LQ R ++ L+ +AR++ PPLLVK+APDL
Sbjct: 164 LADYIVCNVSSPNTPGLRLLQARTEMSALIGAALSARNDSLPDAATRPPLLVKVAPDLDD 223
Query: 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388
LE +A V + L +DG+I+ NTTISRPD + ++ ETGGLSG PL +LS L +Y
Sbjct: 224 AGLEAVAEVTLELGVDGIIMGNTTISRPDSL-RSRHKGETGGLSGAPLFTLSTERLGALY 282
Query: 389 LLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448
L RG+IPL+G GGI+SG DAY KIRAGA+LVQLY+A + GPAL+P+IKA+LA L+ D
Sbjct: 283 RLVRGRIPLVGAGGIASGADAYAKIRAGASLVQLYSALVFHGPALVPRIKADLAARLKAD 342
Query: 449 GFKSIIEAVGADYR 462
GF+S+ +AVGAD R
Sbjct: 343 GFRSVADAVGADIR 356
>sp|Q5R6X6|PYRD_PONAB Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Pongo
abelii GN=DHODH PE=2 SV=1
Length = 395
Score = 360 bits (924), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/380 (51%), Positives = 253/380 (66%), Gaps = 22/380 (5%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L+ LLD E AH LAV + G +PR + D +L + V G KF NP+G+AA
Sbjct: 36 FYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAA 95
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDK+ EAV+GL +GFGFVE+GSVTP PQEGNP+PR+FRL ++ A+INR GFNS G+
Sbjct: 96 GFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSV 155
Query: 204 VAKRLGAQHGKR-KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQG 262
V RL A+ K+ KL E LGVN+GKNKTS DAA DY +G
Sbjct: 156 VEHRLRARQQKQAKLTEDGLP------------------LGVNLGKNKTSVDAAEDYAEG 197
Query: 263 VHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322
V L AD LV+NVSSPNT GLR LQG+ +L+ L+ KV RD ++ P +LVKI
Sbjct: 198 VRVLGPLADCLVVNVSSPNTAGLRNLQGKAELRRLLTKVLQERDGLRGVHR--PAVLVKI 255
Query: 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNN 382
APDL+ +D EDIA+V L +DGLI++NTT+SRP + + + ETGGLSGKP LS
Sbjct: 256 APDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGL-QGALRSETGGLSGKPPRDLSTE 314
Query: 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442
++EMY LT+G++P+IG GG+SSG+DA KIRAGA+LVQLYTA + GP ++ ++K EL
Sbjct: 315 TIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELE 374
Query: 443 ECLERDGFKSIIEAVGADYR 462
L+ GF + +A+GAD+R
Sbjct: 375 ALLKEQGFCRVTDAIGADHR 394
>sp|Q2RX27|PYRD_RHORT Dihydroorotate dehydrogenase (quinone) OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=pyrD PE=3 SV=1
Length = 367
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 247/375 (65%), Gaps = 28/375 (7%)
Query: 88 KLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDK 147
+L P LD E AH LA+ A A G ++ D +L +WGR+F+NPLGLAAGFDK
Sbjct: 6 RLAWPLICGLDPERAHHLAIRALALGLAGHDRAADDPVLACSLWGRRFANPLGLAAGFDK 65
Query: 148 NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKR 207
N E + L LGFGFVEVG+VTP PQ GNP+PR+FRL Q+ A+INR GFN++G+ A+A R
Sbjct: 66 NGEVADALFDLGFGFVEVGTVTPRPQAGNPRPRLFRLTQDRAVINRMGFNNQGMEAMAAR 125
Query: 208 LGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS 267
+ P G+LG+N+GKNKT+EDAA DY G+ L+
Sbjct: 126 F--------------VRARPR-----------GVLGINLGKNKTTEDAAGDYEAGIAKLA 160
Query: 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS 327
ADYLVINVSSPNTPGLR LQGR+ L L+ + +AA D G PPLL+K+APDL+
Sbjct: 161 PLADYLVINVSSPNTPGLRALQGREPLSLLIARARAALDAACPGLR--PPLLLKVAPDLT 218
Query: 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387
ED+ DIA VA+ LDGLI +NTTI+RP + + A ETGGLSG PL + ++ +
Sbjct: 219 DEDMADIAEVALGGGLDGLICTNTTIARPKSLVSDH-AGETGGLSGLPLRYRARQVIARL 277
Query: 388 YLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLER 447
Y LT+G +PLIG GGI G +AY +IRAGA+L+Q+Y+A Y GP L+ +IK +LA+ L
Sbjct: 278 YGLTKGALPLIGVGGIGDGAEAYARIRAGASLIQIYSALVYEGPGLVGRIKRDLAQRLRA 337
Query: 448 DGFKSIIEAVGADYR 462
DGF S+ EAVGAD+R
Sbjct: 338 DGFASVAEAVGADHR 352
>sp|A7HQ77|PYRD_PARL1 Dihydroorotate dehydrogenase (quinone) OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=pyrD PE=3 SV=1
Length = 348
Score = 344 bits (883), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 238/372 (63%), Gaps = 32/372 (8%)
Query: 89 LVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKN 148
L P +L+D E AH L + A G P + PDP L ++++G F NPLG+AAGFDKN
Sbjct: 6 LARPLMSLMDPETAHGLTLRALRLGLGPTRRAPDPVSLAIDLFGLHFENPLGIAAGFDKN 65
Query: 149 AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRL 208
E + +L +G GF EVG+VTP+PQ GNP+PR+FRL A+INR GFN++G A+ KRL
Sbjct: 66 GEVPDAMLAMGMGFAEVGTVTPLPQPGNPRPRVFRLPVHRAVINRLGFNNQGHAALKKRL 125
Query: 209 GAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268
A+ + PGILGVNIG NK + D ADY G+
Sbjct: 126 LARRKR------------------------PGILGVNIGANKDAADRIADYEAGIRAFEG 161
Query: 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328
A Y +N+SSPNTPGLR LQ + +L++LV +V AAR +G P+L+KIAPDL+
Sbjct: 162 LASYFTVNISSPNTPGLRALQNKAELQNLVARVLAAR-------KGKTPVLLKIAPDLNA 214
Query: 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388
E+L DIA VA+ LDGLI+SNTTI+R VS A ETGGLSG PL +S +L++MY
Sbjct: 215 EELGDIAEVALEQGLDGLIVSNTTIAREGLVS-GVNANETGGLSGAPLFPMSTAVLRDMY 273
Query: 389 LLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448
LT G++PL+G GGISS +DAY KIRAGA+LVQLY+A Y GP L+ +IK LA L D
Sbjct: 274 RLTGGRLPLVGVGGISSADDAYAKIRAGASLVQLYSALTYDGPPLVARIKQGLAARLAAD 333
Query: 449 GFKSIIEAVGAD 460
GF + +AVGAD
Sbjct: 334 GFAHLKDAVGAD 345
>sp|P32748|PYRD_DROME Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Drosophila
melanogaster GN=Dhod PE=2 SV=2
Length = 405
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/404 (46%), Positives = 254/404 (62%), Gaps = 29/404 (7%)
Query: 60 TLGLVIATGA-YVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHTLAVSAAARGWVPRE 118
+LG+V GA V+ + LF V P LL AE +H LAV A P
Sbjct: 21 SLGIVTVGGAALVAGITAYKNQDQLFRT--FVMPAVRLLPAEASHQLAVLACKYRLCPVS 78
Query: 119 KRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPK 178
+ D L +GR SNP+G+AAGFDKNAEAV+GL LGFGF+EVG+VTP QEGNPK
Sbjct: 79 QYHDDQNLHTSFFGRMLSNPIGIAAGFDKNAEAVDGLQDLGFGFIEVGTVTPAAQEGNPK 138
Query: 179 PRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAG 238
PR+FRL ++ AIINR GFNS+G AV +RL K +
Sbjct: 139 PRVFRLTEDKAIINRYGFNSDGHQAVLQRLRLLRKKENFN-------------------- 178
Query: 239 PGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLV 298
G++GVN+G+NKT+ ADYVQGV ADYLVINVSSPNT GLR +Q +++L++L+
Sbjct: 179 -GVVGVNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELL 237
Query: 299 KKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVA--VALRLDGLIISNTTISRP 356
++V + + + P+L+K++PDLS +D++DI V R+DGLI+SNTT+SR
Sbjct: 238 EQVNDTKSSLDKNKN--VPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRE 295
Query: 357 DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416
+ + KN +A+ETGGLSG PL + S ++ +MY LT GKIP+IG GG++SG DAY KI AG
Sbjct: 296 N-IEKNKLAEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAG 354
Query: 417 ATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGAD 460
A+ VQ+YTA Y GPAL+ IKAEL+ + R G ++ + VG +
Sbjct: 355 ASYVQIYTALVYEGPALVEDIKAELSALITRLGHTNVADVVGTN 398
>sp|A7IBC2|PYRD_XANP2 Dihydroorotate dehydrogenase (quinone) OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=pyrD PE=3
SV=1
Length = 357
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 233/375 (62%), Gaps = 24/375 (6%)
Query: 89 LVNPFFALLDAEVAHTLAVSAAARGWVPR-EKRPDPAILGLEVWGRKFSNPLGLAAGFDK 147
++ P F + E AH L++ G VP PD +L VWG F NP+GLAAGFDK
Sbjct: 6 VLKPLFRFMTPEQAHHLSIRVLKSGLVPDLSGGPDDPVLATRVWGLDFPNPVGLAAGFDK 65
Query: 148 NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKR 207
+ E + L GFGFVE G+VTP PQ GNP PR+FRL ++ A+INR GFNSEG+ R
Sbjct: 66 HCEVADALFRFGFGFVEAGTVTPRPQPGNPLPRLFRLDEDEAVINRFGFNSEGLAPFVFR 125
Query: 208 LGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS 267
LG + +A GK G I+G N+GKNK SEDA DY GV
Sbjct: 126 LGQR--------------------RASGKHG--IVGANVGKNKESEDALEDYGAGVSATC 163
Query: 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS 327
+ ADYLV N+SSPNTPGLR LQ R +++ L+ V + R+ PLLVK+APDL
Sbjct: 164 RLADYLVCNISSPNTPGLRALQARAEMETLLAHVISVRNASMPDPAARTPLLVKVAPDLD 223
Query: 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387
L D+A ++A +DG+I+ NTT+SRP + ++ ETGGLSGKPLL+LS L +
Sbjct: 224 DAALADVAEASLATGVDGIIMGNTTLSRPASL-QSKFKDETGGLSGKPLLALSTERLGAL 282
Query: 388 YLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLER 447
Y L G++P+IG GGI+SG DAY K+RAGA+LVQ+Y+A + GP L+ +IK +LA L+
Sbjct: 283 YRLVGGRLPIIGVGGIASGADAYAKVRAGASLVQIYSALVFHGPGLVTRIKTDLAARLKA 342
Query: 448 DGFKSIIEAVGADYR 462
DGF SI +AVG D R
Sbjct: 343 DGFASIADAVGVDVR 357
>sp|B3QEE3|PYRD_RHOPT Dihydroorotate dehydrogenase (quinone) OS=Rhodopseudomonas
palustris (strain TIE-1) GN=pyrD PE=3 SV=1
Length = 364
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 236/379 (62%), Gaps = 32/379 (8%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L P LD E AH LA+ + W P + RPD + L + +G FSNP+G+AA
Sbjct: 5 FDAVSL--PLLRWLDPEDAHRLAIQGL-KLWPPVKPRPDDSKLAVRAFGLNFSNPVGIAA 61
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDKNAEA + LL LGFGFVEVG+VTP PQ GNP+PR+FRL ++ A+INR GFN+EG A
Sbjct: 62 GFDKNAEAPDALLRLGFGFVEVGTVTPKPQAGNPRPRLFRLERDEAVINRMGFNNEGAEA 121
Query: 204 VAKRLGA--QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQ 261
V +RL A Q+G GI+GVN+G NK S+D ADYV+
Sbjct: 122 VLRRLAARAQYG--------------------------GIVGVNVGANKDSDDRVADYVK 155
Query: 262 GVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321
+ T + A Y +NVSSPNTPGLR LQ L DL+ +V AR+ ++ G P+L+K
Sbjct: 156 LIETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIDARERVR-AAAGDTPVLLK 214
Query: 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN 381
IAPDLS +L+D+ +A + R+DG+I++NTT+SR + + E GGLSG+PL LS
Sbjct: 215 IAPDLSLGELDDVVHIARSRRVDGMIVANTTLSRSPTLRERTKMNEQGGLSGRPLFRLST 274
Query: 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441
++ E ++ G PLIG GGI SG A KIRAGATLVQLY+A Y G L+ IKA+L
Sbjct: 275 RMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQLYSALVYKGLGLVESIKADL 334
Query: 442 AECLERDGFKSIIEAVGAD 460
A L R G S+ E VGAD
Sbjct: 335 ASTLLRTGRDSLAEIVGAD 353
>sp|Q6NBN1|PYRD_RHOPA Dihydroorotate dehydrogenase (quinone) OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=pyrD PE=3
SV=1
Length = 364
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/379 (47%), Positives = 234/379 (61%), Gaps = 32/379 (8%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L P LD E AH LA+ + W P + RPD + L + +G FSNP+G+AA
Sbjct: 5 FDAVSL--PLLRWLDPEDAHRLAIQGL-KLWPPVKPRPDDSKLAVRAFGLNFSNPVGIAA 61
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDKNAEA + LL LGFGFVEVG+VTP PQ GNP+PR+FRL ++ A+INR GFN+EG
Sbjct: 62 GFDKNAEAPDALLRLGFGFVEVGTVTPKPQAGNPRPRLFRLERDEAVINRMGFNNEGAEV 121
Query: 204 VAKRLGA--QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQ 261
V +RL A Q+G GI+GVN+G NK S+D ADYV+
Sbjct: 122 VLRRLAARAQYG--------------------------GIVGVNVGANKDSDDRVADYVK 155
Query: 262 GVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321
+ T + A Y +NVSSPNTPGLR LQ L DL+ +V AR+ ++ G P+L+K
Sbjct: 156 LIETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIDARERVR-AAAGDTPVLLK 214
Query: 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN 381
IAPDLS +L+D+ +A + R+DG+I++NTT+SR + + E GGLSG+PL LS
Sbjct: 215 IAPDLSLGELDDVVHIARSRRVDGMIVANTTLSRSPTLRERTKMNEQGGLSGRPLFRLST 274
Query: 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441
++ E ++ G PLIG GGI SG A KIRAGATLVQLY+A Y G L+ IKA+L
Sbjct: 275 RMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQLYSALVYKGLGLVESIKADL 334
Query: 442 AECLERDGFKSIIEAVGAD 460
A L R S+ E VGAD
Sbjct: 335 ASTLLRTDRDSLAEIVGAD 353
>sp|Q2IR55|PYRD_RHOP2 Dihydroorotate dehydrogenase (quinone) OS=Rhodopseudomonas
palustris (strain HaA2) GN=pyrD PE=3 SV=1
Length = 364
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/372 (48%), Positives = 231/372 (62%), Gaps = 32/372 (8%)
Query: 92 PFFALLDAEVAHTLAVSAAARGWVPREK-RPDPAILGLEVWGRKFSNPLGLAAGFDKNAE 150
P LLDAE AH LA+ +P+ K RPD + L + +G F NP+G+AAGFDKNAE
Sbjct: 11 PLLRLLDAEDAHRLAIQGLR--LLPQVKPRPDDSKLAVRAFGLNFPNPVGIAAGFDKNAE 68
Query: 151 AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGA 210
A + LL LGFGFVE+G+VTP PQ GNP+PR+FRL ++ AIINR GFN++G AV +RL A
Sbjct: 69 APDALLRLGFGFVEIGTVTPKPQAGNPRPRLFRLERDEAIINRMGFNNDGAEAVLRRLAA 128
Query: 211 --QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268
Q G GI+GVN+G NK S D ADYV + T +
Sbjct: 129 RAQQG--------------------------GIVGVNVGANKDSTDRVADYVSLIETFAP 162
Query: 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328
A Y +NVSSPNTPGLR LQ L DL+ +V AR+ ++ G P+L+KIAPDL+
Sbjct: 163 VASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARERVR-ASAGDTPVLLKIAPDLTL 221
Query: 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388
+L+D+ +A + R+DG+I++NTT+SR + + E GGLSG+PL LS ++ E Y
Sbjct: 222 SELDDVVHIARSRRVDGMIVANTTLSRSPMLRERTRLNEQGGLSGRPLFRLSTRMVAETY 281
Query: 389 LLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448
+ G PLIG GGI SG A KIRAGA+LVQLY+A Y G L+ IKA+LA L R
Sbjct: 282 VRAEGAFPLIGVGGIDSGGAALTKIRAGASLVQLYSALIYKGLGLVDSIKADLASTLLRT 341
Query: 449 GFKSIIEAVGAD 460
G S+ E VGAD
Sbjct: 342 GRDSLSEIVGAD 353
>sp|A5EA61|PYRD_BRASB Dihydroorotate dehydrogenase (quinone) OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=pyrD PE=3 SV=1
Length = 364
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/374 (47%), Positives = 233/374 (62%), Gaps = 28/374 (7%)
Query: 88 KLVNPFFALLDAEVAHTLAVSAAARGWVPREK-RPDPAILGLEVWGRKFSNPLGLAAGFD 146
+L P LDAE AH LA+ +P K RPD A L + +G F NP+G+AAGFD
Sbjct: 7 QLSLPLLRWLDAEDAHRLAIQGLK--LLPAIKPRPDDAKLAVRAFGLNFPNPVGMAAGFD 64
Query: 147 KNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAK 206
KNAE + LL LGFGFVE+GSVTP PQ GNP+PR+FRL ++ A++NR GFN++G V +
Sbjct: 65 KNAEVPDALLRLGFGFVEIGSVTPRPQSGNPRPRLFRLERDEAVVNRMGFNNDGAEIVLR 124
Query: 207 RLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTL 266
RL AG GI+GVN+G NK S D ADYV+ + T
Sbjct: 125 RL------------------------AGRANQGGIVGVNVGANKDSADRVADYVRLIETF 160
Query: 267 SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL 326
+ A Y +N+SSPNTPGLR LQ QL +L+ KV ARD ++ + G P+L+KIAPDL
Sbjct: 161 APVASYFTVNISSPNTPGLRNLQQAAQLNELLSKVLEARDRVRR-KAGDTPVLLKIAPDL 219
Query: 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKE 386
S +L+D+ VA + +DG+I+SNTT++RP+ + + AKE GGLSG+PL LS ++ E
Sbjct: 220 SLAELDDVVHVARSRGVDGMIVSNTTLARPNSLREQLRAKEQGGLSGRPLFRLSTRMVAE 279
Query: 387 MYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446
++ G PLIG GGI SG A KIRAGA+L+QLY++ Y G L+ IKA+L L
Sbjct: 280 TFVRVEGAFPLIGVGGIDSGGAALTKIRAGASLIQLYSSLVYKGLGLVESIKADLTSTLL 339
Query: 447 RDGFKSIIEAVGAD 460
R G S+ E VGAD
Sbjct: 340 RTGRDSLSEIVGAD 353
>sp|A4Z2G7|PYRD_BRASO Dihydroorotate dehydrogenase (quinone) OS=Bradyrhizobium sp.
(strain ORS278) GN=pyrD PE=3 SV=1
Length = 364
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/374 (47%), Positives = 233/374 (62%), Gaps = 28/374 (7%)
Query: 88 KLVNPFFALLDAEVAHTLAVSAAARGWVPREK-RPDPAILGLEVWGRKFSNPLGLAAGFD 146
+L P LDAE AH LA+ +P K R D A L + +G F NP+G+AAGFD
Sbjct: 7 QLSLPLLRWLDAEDAHRLAIQGLK--LLPAVKPRADDAKLAVRAFGLNFPNPVGMAAGFD 64
Query: 147 KNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAK 206
KNAE + LL LGFGFVE+GSVTP PQ GNP+PR+FRL ++ A+INR GFN++G V +
Sbjct: 65 KNAEVPDALLRLGFGFVEIGSVTPRPQSGNPRPRLFRLERDEAVINRMGFNNDGAEIVLR 124
Query: 207 RLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTL 266
RL AG GI+GVN+G NK S D ADYV+ + T
Sbjct: 125 RL------------------------AGRANQGGIVGVNVGANKDSADRVADYVRLIETF 160
Query: 267 SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL 326
+ A Y +N+SSPNTPGLR LQ QL DL+ KV ARD ++ + G P+L+KIAPDL
Sbjct: 161 APVASYFTVNISSPNTPGLRNLQQASQLDDLLTKVLEARDRVRR-KAGDTPVLLKIAPDL 219
Query: 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKE 386
S +L+D+ VA + +DG+I+SNTT++RP+ + + AKE GGLSG+PL LS ++ E
Sbjct: 220 SLAELDDVVHVARSRGVDGMIVSNTTLARPNSLREQMRAKEQGGLSGRPLFRLSTRMVAE 279
Query: 387 MYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446
++ G PLIG GGI +G A KIRAGA+L+QLY++ Y G L+ IKA+L L
Sbjct: 280 TFVRVEGAFPLIGVGGIDTGGAALTKIRAGASLIQLYSSLVYKGLGLVESIKADLTSTLL 339
Query: 447 RDGFKSIIEAVGAD 460
R G +S+ E VGAD
Sbjct: 340 RTGRESLSEIVGAD 353
>sp|B7KZJ5|PYRD_METC4 Dihydroorotate dehydrogenase (quinone) OS=Methylobacterium
chloromethanicum (strain CM4 / NCIMB 13688) GN=pyrD PE=3
SV=1
Length = 358
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 226/370 (61%), Gaps = 29/370 (7%)
Query: 89 LVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKN 148
L P LDAE AH L + + PR D A L +E++G+ F NP+GLAAGFDK
Sbjct: 8 LARPLLHGLDAETAHDLTIRGLSL-LPPRRPPADDASLAVEMFGQSFPNPVGLAAGFDKG 66
Query: 149 AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRL 208
A + LLGLGFGFVEVG V P PQ GNP+PR+FRL ++ A+INR G NSEG+ AVA RL
Sbjct: 67 ARVADALLGLGFGFVEVGGVVPQPQPGNPRPRVFRLPRDRAVINRFGLNSEGLDAVADRL 126
Query: 209 GAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268
A+ G+ GI+GVNIG NK S D ADYV L+
Sbjct: 127 KARAGRE------------------------GIVGVNIGANKESADRLADYVACTARLAP 162
Query: 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328
+ ++ +NVSSPNTPGLR LQG L DL+ +V AARD +L+KIAPD++
Sbjct: 163 HVAFITVNVSSPNTPGLRDLQGEAFLDDLLARVVAARDASGSSAA----VLLKIAPDIAL 218
Query: 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388
E L+ + A A+ + GL++SNTTI+RP + ++ VAKETGGLSG+PL LS +L E Y
Sbjct: 219 EGLDAMTATALRRGIQGLVVSNTTIARPSSLVESSVAKETGGLSGRPLFGLSTRLLAETY 278
Query: 389 LLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448
L +IPLIG GGI S E A+ KIRAGA LVQLY+A Y GP L+ IK L++ L +
Sbjct: 279 LRVGDRIPLIGVGGIDSAEAAWAKIRAGARLVQLYSALVYEGPGLVGTIKRGLSQRLRAE 338
Query: 449 GFKSIIEAVG 458
G S+ VG
Sbjct: 339 GLTSLAPVVG 348
>sp|Q13D13|PYRD_RHOPS Dihydroorotate dehydrogenase (quinone) OS=Rhodopseudomonas
palustris (strain BisB5) GN=pyrD PE=3 SV=1
Length = 364
Score = 311 bits (797), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 228/372 (61%), Gaps = 32/372 (8%)
Query: 92 PFFALLDAEVAHTLAVSAAARGWVPREK-RPDPAILGLEVWGRKFSNPLGLAAGFDKNAE 150
P L DAE AH LA+ +P+ K RPD L + +G F NP+G+AAGFDKNAE
Sbjct: 11 PLLRLFDAEDAHRLAIQGLR--LLPQVKPRPDDPKLAVRAFGLNFPNPVGIAAGFDKNAE 68
Query: 151 AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGA 210
A + L+ LGFGFVE+G+VTP PQ GNP+PR+FRL ++ A+INR GFN++G AV +RL A
Sbjct: 69 APDALMRLGFGFVEIGTVTPKPQAGNPRPRLFRLERDEAVINRMGFNNDGSEAVLRRLAA 128
Query: 211 --QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268
Q G GILGVN+G NK S D ADYV + T +
Sbjct: 129 RAQQG--------------------------GILGVNVGANKDSSDRVADYVALIETFAP 162
Query: 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328
A Y +NVSSPNTPGLR LQ L DL+ +V AR+ ++ G P+L+KIAPDL+
Sbjct: 163 VASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARERVRP-SAGDTPVLLKIAPDLTL 221
Query: 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388
+L+D+ +A + ++DG+I++NTT+SR + + E GGLSG+PL LS ++ E Y
Sbjct: 222 GELDDVVHIARSRKVDGMIVANTTLSRSPLLRERTRMNEQGGLSGRPLFRLSTRMVAETY 281
Query: 389 LLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448
+ G PLIG GGI SG A KIRAGA+LVQLY+A Y G L+ IK +LA L R
Sbjct: 282 VRAEGAFPLIGVGGIDSGGAALTKIRAGASLVQLYSALIYKGLGLVESIKTDLASTLLRT 341
Query: 449 GFKSIIEAVGAD 460
G S+ E VGAD
Sbjct: 342 GRDSLAEIVGAD 353
>sp|Q98B89|PYRD_RHILO Dihydroorotate dehydrogenase (quinone) OS=Rhizobium loti (strain
MAFF303099) GN=pyrD PE=3 SV=1
Length = 359
Score = 311 bits (797), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 224/360 (62%), Gaps = 31/360 (8%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAI-LGLEVWGRKFSNPLGLAAGFDKNAEAVEGL 155
D E AH L++ AA R +P R I L + + G F NPLG+AAG+DK+AE + L
Sbjct: 15 FDPETAHGLSI-AALRCGLPAGTRAVRDIRLKVSLCGLDFPNPLGMAAGYDKDAEVPDAL 73
Query: 156 LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKR 215
LGLGFGF EVG+VTP+PQ GNPKPRIFRL + A+INR GFN+EG A KRL A+ G+
Sbjct: 74 LGLGFGFAEVGTVTPLPQAGNPKPRIFRLTADEAVINRLGFNNEGHAAAEKRLAARKGR- 132
Query: 216 KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVI 275
PGI+GVNIG NK S D DY +GV +++A YL +
Sbjct: 133 -----------------------PGIVGVNIGANKDSADRIGDYERGVGRFARHASYLTV 169
Query: 276 NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335
N+SSPNTPGLR +Q R+QL +L+ +V AAR PP+ +KIAPDL + +LEDIA
Sbjct: 170 NISSPNTPGLRNMQAREQLGELLSRVMAARASAAT----QPPIFLKIAPDLVEAELEDIA 225
Query: 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A V R+DG+I+SNTTISRP P+ V +ETGGLSGKPL S +L +M L I
Sbjct: 226 AEVVEKRIDGIIVSNTTISRP-PLRSGDVGRETGGLSGKPLFERSTIVLAKMRKLLGPGI 284
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
+IG GG+ S E A KIRAGA LVQLYT Y GPAL +I A +A E + KSI E
Sbjct: 285 AIIGVGGVDSAETALEKIRAGADLVQLYTGMIYAGPALPGRIVAGMARFCETERLKSIGE 344
>sp|Q07TQ6|PYRD_RHOP5 Dihydroorotate dehydrogenase (quinone) OS=Rhodopseudomonas
palustris (strain BisA53) GN=pyrD PE=3 SV=1
Length = 364
Score = 305 bits (781), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/364 (46%), Positives = 225/364 (61%), Gaps = 28/364 (7%)
Query: 98 DAEVAHTLAVSAAARGWVPREKRP-DPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
D E AH LA+ +P+ P D L + +G FSNP+G+AAGFDKNAEA + LL
Sbjct: 17 DPEDAHRLAIQGLR--LLPQAAPPADQPNLSVRAFGLNFSNPVGIAAGFDKNAEAPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
+GFGFVE+G+VTP PQ GNP+PR+FRL ++ A+INR GFN++G V +RL A+ +
Sbjct: 75 RMGFGFVEIGTVTPKPQSGNPRPRLFRLERDEAVINRMGFNNDGGEVVLRRLAARSAR-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVN+G NK SED ADYV+ + + A Y +N
Sbjct: 133 ----------------------GGIVGVNVGANKDSEDRVADYVRLIEMFAPVASYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
VSSPNTPGLR LQ L DL+ KV AR+ ++ G P+L+KIAPDL+ +L+D+
Sbjct: 171 VSSPNTPGLRNLQQAAALDDLLAKVIEARERVR-AIAGDTPVLLKIAPDLTLNELDDVVH 229
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396
+A + ++DG+I++NTT+SR + + AKE GGLSG+PL LS ++ E Y+ G P
Sbjct: 230 IARSRKVDGMIVANTTLSRTHTLREQARAKEQGGLSGRPLFRLSTRMVAETYVRAEGAFP 289
Query: 397 LIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEA 456
LIG GGI SG A KIRAGA+L+QLY+A Y G L+ IK +LA L R G + E
Sbjct: 290 LIGVGGIDSGGAALTKIRAGASLIQLYSALIYKGLGLVESIKQDLASTLLRTGRDQLSEI 349
Query: 457 VGAD 460
VGAD
Sbjct: 350 VGAD 353
>sp|P32747|PYRD_SCHPO Dihydroorotate dehydrogenase (quinone), mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ura3 PE=1 SV=1
Length = 443
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 228/372 (61%), Gaps = 14/372 (3%)
Query: 93 FFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAV 152
F A E +H +A+ AA+ G P+++ D L +EVWG+KF NP+GLAAGFDK A+A+
Sbjct: 72 FHAFTTPEFSHRVAILAASWGITPKDRVADDPSLAVEVWGKKFCNPIGLAAGFDKQADAI 131
Query: 153 EGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAV-------A 205
GLL GF ++E+GSVTP PQ GNPKPR FRL+ + ++INR GFNS G A+
Sbjct: 132 SGLLNFGFSYLEIGSVTPKPQPGNPKPRYFRLKPDLSVINRYGFNSIGHDAILAKIQKRV 191
Query: 206 KRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAG---PGILGVNIGKNKTSEDAAADYVQG 262
++ A+ + L + +S D G LG+N+GKNK + DYV+G
Sbjct: 192 RKYIAKTSPQLLKQFDANPASCTDPAVLGVPRSLIPNKFLGINLGKNKNGNEIE-DYVEG 250
Query: 263 VHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322
V T +AD LVINVSSPNTPGLR LQ + L L+ V + R+++ PP+LVKI
Sbjct: 251 VRTFGNFADILVINVSSPNTPGLRNLQKKSALSTLLTAVVSERNKLNSPH---PPVLVKI 307
Query: 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNN 382
APDL++E+L DIA V ++DG+I+ NTT+ RP + +ETGGLSG PL ++ N
Sbjct: 308 APDLNEEELTDIADVLKKCKIDGVIVGNTTVQRPKTLKSTSHVEETGGLSGPPLKPIALN 367
Query: 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442
L+ + IP+IGCGGISSG+DA RAGAT+VQ+YTA Y GP + +IK E+
Sbjct: 368 TLRTLRKHLSSDIPIIGCGGISSGKDAIEYARAGATMVQVYTALGYDGPVIAHKIKQEIL 427
Query: 443 ECLERDGFKSII 454
L+ + II
Sbjct: 428 AELKGKRWVDII 439
>sp|B5ZPH6|PYRD_RHILW Dihydroorotate dehydrogenase (quinone) OS=Rhizobium leguminosarum
bv. trifolii (strain WSM2304) GN=pyrD PE=3 SV=1
Length = 362
Score = 302 bits (774), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/368 (47%), Positives = 219/368 (59%), Gaps = 35/368 (9%)
Query: 89 LVNPF-------FALLDAEVAHTLAVSAAARGWVPR-EKRPDPAILGLEVWGRKFSNPLG 140
+++PF L D E AH ++++A G VP + PDP L V G F NPLG
Sbjct: 1 MIDPFKRLARKGLFLFDPETAHGMSIAALKSGLVPACQITPDPR-LCQTVAGLTFENPLG 59
Query: 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200
+AAG+DKNAE E LL LGFGF E+G+VTP PQ GNP+PRIFRL ++ A+INR GFN+EG
Sbjct: 60 MAAGYDKNAEVPEALLKLGFGFTEIGTVTPKPQAGNPRPRIFRLVEDEAVINRLGFNNEG 119
Query: 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYV 260
A RL A G+ GI+GVNIG NK SED ADYV
Sbjct: 120 HEAAFGRLAALSGR-------------------------GIVGVNIGANKDSEDRIADYV 154
Query: 261 QGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320
G+ A Y N+SSPNTPGLR LQ R+ L L+ V AARDE+ P+ +
Sbjct: 155 AGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSSVLAARDEVAAASGRKVPVFL 214
Query: 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS 380
KIAPDL++E ++DIAA A+A LDGLI+SNTT+SR D + AKETGGLSG PL S
Sbjct: 215 KIAPDLTEEGMDDIAAEALAHALDGLIVSNTTLSR-DGLKDQRQAKETGGLSGVPLFEKS 273
Query: 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440
+L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L I
Sbjct: 274 TAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGDIVRG 333
Query: 441 LAECLERD 448
L++ ++R+
Sbjct: 334 LSKLMDRE 341
>sp|Q1MLT8|PYRD_RHIL3 Dihydroorotate dehydrogenase (quinone) OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=pyrD PE=3 SV=1
Length = 362
Score = 302 bits (773), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/375 (47%), Positives = 221/375 (58%), Gaps = 35/375 (9%)
Query: 89 LVNPF-------FALLDAEVAHTLAVSAAARGWVPR-EKRPDPAILGLEVWGRKFSNPLG 140
+++PF L D E AH ++++A G VP + PDP L V G F NPLG
Sbjct: 1 MIDPFKRLARKGLFLFDPETAHGMSIAALKSGLVPACQLTPDPR-LRQTVAGLTFENPLG 59
Query: 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200
+AAG+DKNAE E LL LGFGF E+G+VTP PQ GNP+PRIFRL ++ +INR GFN+EG
Sbjct: 60 MAAGYDKNAEVPEALLKLGFGFTEIGTVTPKPQSGNPRPRIFRLVEDEGVINRLGFNNEG 119
Query: 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYV 260
A RL A G G++GVNIG NK SED ADYV
Sbjct: 120 HDAAFGRLAALRGG-------------------------GMIGVNIGANKDSEDRIADYV 154
Query: 261 QGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320
G+ A Y N+SSPNTPGLR LQGR+ L L+ V AARDEM P+ +
Sbjct: 155 AGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLAARDEMGAASGRKIPVFL 214
Query: 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS 380
KIAPDL++E ++DIAA A++ LDGLI+SNTT+SR D + AKETGGLSG PL S
Sbjct: 215 KIAPDLTEEGMDDIAAEALSHALDGLIVSNTTLSR-DGLKDQRQAKETGGLSGVPLFEKS 273
Query: 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440
+L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L +
Sbjct: 274 TAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLAGDVVRG 333
Query: 441 LAECLERDGFKSIIE 455
L++ L+R+ SI E
Sbjct: 334 LSKLLDREKAASIRE 348
>sp|Q8G2K8|PYRD_BRUSU Dihydroorotate dehydrogenase (quinone) OS=Brucella suis biovar 1
(strain 1330) GN=pyrD PE=3 SV=1
Length = 364
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|B0CJU0|PYRD_BRUSI Dihydroorotate dehydrogenase (quinone) OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=pyrD PE=3 SV=1
Length = 364
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|A5VNQ1|PYRD_BRUO2 Dihydroorotate dehydrogenase (quinone) OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=pyrD PE=3 SV=1
Length = 364
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|A9M7Z9|PYRD_BRUC2 Dihydroorotate dehydrogenase (quinone) OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=pyrD PE=3 SV=1
Length = 364
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|Q6V3W9|PYRD_LACK1 Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Lachancea
kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 /
NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=URA9
PE=1 SV=1
Length = 446
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 253/411 (61%), Gaps = 25/411 (6%)
Query: 70 YVSTVDEATFCGW-LFSATKLVNPFF-------ALLDAEVAHTLAVSAAARGWVPREK-R 120
Y + + F G+ LF+A ++ + A DAE H + G P+
Sbjct: 43 YTAGILGGAFAGYYLFNARSAIHEYLLCPILRLATPDAENGHRAGIFCLKWGLAPKLLFD 102
Query: 121 PDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPR 180
D +L + V+G K +NP+G AAG DK+AEA++G++ GFG++E+GSVTP+PQ GNPKPR
Sbjct: 103 EDDEVLHVNVFGTKMTNPIGCAAGLDKDAEAIDGIMQGGFGYMEIGSVTPLPQPGNPKPR 162
Query: 181 IFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPG 240
FRL Q+ A+INR GFNS G AV L +++ ++ + ++E+
Sbjct: 163 FFRLPQDDAVINRYGFNSSGHDAVYSNLS-----KRVTSFLKSYFAKDNEIDKLSLYKNK 217
Query: 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKK 300
+L +N+GKNKT D DY++GV +AD LVINVSSPNTPGLR LQ +L DL+ +
Sbjct: 218 LLAINLGKNKTG-DEVKDYLKGVEKFQSHADVLVINVSSPNTPGLRDLQNESKLTDLLSQ 276
Query: 301 VQAARDEM-QWG-----EEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS 354
+ R+ + Q G + PP+LVKIAPDL++ +LE IA A ++DG+I+SNTTI
Sbjct: 277 IVQKRNSLIQNGNVLGAKTHKPPVLVKIAPDLTEPELESIAVAAKKSKVDGIIVSNTTIQ 336
Query: 355 RPDP-VSKNPVAK-ETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGEDAYR 411
RPD V+++ K +TGGLSGKPL + LK +Y T+ ++ L+GCGGISSG+DA
Sbjct: 337 RPDSLVTRDEALKSQTGGLSGKPLKPFALKALKTVYKYTKDSELVLVGCGGISSGQDAIE 396
Query: 412 KIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462
+AGAT VQLYT++AY GP LI IK E+ E L+++G K+ + +G D +
Sbjct: 397 FAKAGATFVQLYTSYAYKGPGLIAHIKDEVTEELKKEG-KTWNQIIGEDSK 446
>sp|Q8YFB1|PYRD_BRUME Dihydroorotate dehydrogenase (quinone) OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=pyrD
PE=3 SV=1
Length = 364
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLY+ Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYSGLIYRGPGLPGEILRGLSTAIKYEGVSSIAE 348
>sp|C0RH28|PYRD_BRUMB Dihydroorotate dehydrogenase (quinone) OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=pyrD PE=3 SV=1
Length = 364
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 218/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLY+ Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYSGLIYRGPGLPGEILRGLSTAIKYEGVSSIAE 348
>sp|B8ID11|PYRD_METNO Dihydroorotate dehydrogenase (quinone) OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=pyrD PE=3 SV=1
Length = 359
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/369 (47%), Positives = 225/369 (60%), Gaps = 29/369 (7%)
Query: 82 WLFSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRP-DPAILGLEVWGRKFSNPLG 140
L S L P LDAE AH L + A + +P P D L + V GR F NP+G
Sbjct: 1 MLASLFPLARPVLHALDAETAHRLTIRALS--LLPAGAPPADDPRLAVSVLGRHFPNPVG 58
Query: 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200
LAAGFDK AE + LL LGFGFVEVG V P PQ GNP+PR+FRL + A+INR G NSEG
Sbjct: 59 LAAGFDKGAEVPDALLSLGFGFVEVGGVVPRPQPGNPRPRVFRLTGDRAVINRFGLNSEG 118
Query: 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYV 260
+ VA RL A+ G+ PGILGVNIG NK + D ADYV
Sbjct: 119 LAVVAARLAARAGR------------------------PGILGVNIGANKDATDRLADYV 154
Query: 261 QGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320
L+ D++ +NVSSPNTPGLR LQG L DL+ +V AARDE +L+
Sbjct: 155 ACTRALAGLVDFVTVNVSSPNTPGLRDLQGEVFLDDLLARVVAARDEAASPRRAA--ILL 212
Query: 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS 380
KIAPD++ + L+ I A A+ ++GL+ISNTT++RP +++ +A E GGLSG+PL + S
Sbjct: 213 KIAPDITLDSLDAITATALRRGVEGLVISNTTVARPASLTETTLAAEAGGLSGRPLFAPS 272
Query: 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440
+L E +L ++PL+G GG+ S E A+ KIRAGA+LVQLY+A Y GP L+ +IKA
Sbjct: 273 TRLLAEAFLRVGDRLPLVGVGGVDSAEAAWTKIRAGASLVQLYSALVYAGPGLVREIKAG 332
Query: 441 LAECLERDG 449
L E + R+G
Sbjct: 333 LVERIAREG 341
>sp|Q6CTX8|PYRD2_KLULA Dihydroorotate dehydrogenase (quinone), mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=URA9 PE=3
SV=1
Length = 445
Score = 298 bits (763), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 247/411 (60%), Gaps = 25/411 (6%)
Query: 70 YVSTVDEATFCGWLFSATK------LVNPFFALL--DAEVAHTLAVSAAARGWVPRE-KR 120
Y + +F G+ FS ++ ++ P L+ DAE H L + G PR
Sbjct: 42 YTVGIAIGSFAGFYFSNSRSAFHEYVLCPMLRLVTPDAEDGHKLGIWFLKNGLAPRLWFD 101
Query: 121 PDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPR 180
D +L + ++G+K +NP+G AAG DKN +A++G+L GFG++E+GSVTP+PQ GNP+PR
Sbjct: 102 NDDKVLNVNIFGKKLTNPIGCAAGLDKNGDAIDGILSGGFGYIEIGSVTPLPQPGNPRPR 161
Query: 181 IFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPG 240
FRL + A+INR GFNS G V L + ++ + ++ V+
Sbjct: 162 FFRLPLDDAVINRYGFNSSGHDTVVNTL-----QSRITSFINSYMFKDNSVENLSLYKDK 216
Query: 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKK 300
+LGVN+GKNKT D DY++GV + +YAD LVINVSSPNTPGLR LQ L DL+ +
Sbjct: 217 LLGVNLGKNKTG-DEVQDYLKGVESFQKYADVLVINVSSPNTPGLRSLQKESILTDLLTQ 275
Query: 301 VQAARDEMQW------GEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS 354
V A RD + + PP+LVK+APDL +E+++ IA A ++DG+IISNTTI
Sbjct: 276 VVAKRDSLVTSGNALGAKTHKPPVLVKVAPDLVEEEIKSIAEAAKKSKVDGIIISNTTIQ 335
Query: 355 RPDPV--SKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK-IPLIGCGGISSGEDAYR 411
RP + + + + GGLSGKPL L+ LK M T+G + L+GCGGISSG DA
Sbjct: 336 RPTTLITEDSDLVSQAGGLSGKPLKPLALKALKTMAKYTKGSGLVLVGCGGISSGADAIE 395
Query: 412 KIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462
+AGA++V+LYTA+AY GP LI +IK E E L+++ K+ E +G D +
Sbjct: 396 FAKAGASMVELYTAYAYKGPGLIAKIKDETTELLKKEN-KTWSEIIGEDIK 445
>sp|A7HD76|PYRD_ANADF Dihydroorotate dehydrogenase (quinone) OS=Anaeromyxobacter sp.
(strain Fw109-5) GN=pyrD PE=3 SV=1
Length = 363
Score = 297 bits (761), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/371 (45%), Positives = 227/371 (61%), Gaps = 36/371 (9%)
Query: 97 LDAEVAHTLAVSAAARGWVP----REKRPD-PAILGLEVWGRKFSNPLGLAAGFDKNAEA 151
LD E AH LA A R VP R +RP P L + G F P+GLAAGFDK +
Sbjct: 13 LDPERAHRLAHGALHR--VPPGLARLRRPAVPPELRVSCLGLDFDGPIGLAAGFDKGDAS 70
Query: 152 VEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQ 211
+ GL LGF VE+G++TP PQ GN PR+FRL + A++NR GFN+ G A+RL
Sbjct: 71 IAGLFALGFSHVEIGTITPRPQAGNEPPRLFRLVEHRALVNRMGFNNAGAEVCARRLAG- 129
Query: 212 HGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTS--EDAAADYVQGVHTLSQY 269
V A + GP +GVN+GKNKT+ EDAAADY+ + L Y
Sbjct: 130 -------------------VPATARMGP--VGVNVGKNKTTPNEDAAADYLACIDRLHPY 168
Query: 270 ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKE 329
ADYLV+N+SSPNTPGLR LQ R QL L++ E G+ PLLVK+APDLS
Sbjct: 169 ADYLVVNISSPNTPGLRQLQERDQLDALLRACAGRLRERAPGK----PLLVKLAPDLSPT 224
Query: 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL 389
L++ VA+ + G++ +NTT+SR V ++P A+E GGLSG PL +L+ ++++ Y+
Sbjct: 225 ALDEAVDVAIDAGVSGIVATNTTLSRAG-VERHPRAREAGGLSGAPLEALATSVVRRCYI 283
Query: 390 LTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDG 449
G++P++GCGG+ + E AY KIRAGATLVQ+YT YGGP + ++ LA L RDG
Sbjct: 284 RAAGRVPIVGCGGVMNAEGAYAKIRAGATLVQVYTGLVYGGPGFVRRLNDGLARLLARDG 343
Query: 450 FKSIIEAVGAD 460
F+++ EAVGAD
Sbjct: 344 FRTVAEAVGAD 354
>sp|Q57F47|PYRD_BRUAB Dihydroorotate dehydrogenase (quinone) OS=Brucella abortus biovar 1
(strain 9-941) GN=pyrD PE=3 SV=1
Length = 364
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 217/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYLLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|Q2YPG3|PYRD_BRUA2 Dihydroorotate dehydrogenase (quinone) OS=Brucella abortus (strain
2308) GN=pyrD PE=3 SV=1
Length = 364
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 217/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYLLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|B2S953|PYRD_BRUA1 Dihydroorotate dehydrogenase (quinone) OS=Brucella abortus (strain
S19) GN=pyrD PE=3 SV=1
Length = 364
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 217/360 (60%), Gaps = 28/360 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G KF NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSITGLKTGIVTCRTPEDPA-LSVKVAGLKFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF EVG++TP PQ GNP+PRIFRL + A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFAEVGTLTPRPQSGNPRPRIFRLVDDKAVINRLGFNNEGHEAAFKRLSRRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYLLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R+ L +L+ +V ARDE P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLKRPVFLKIAPDLTDEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A A +LDG+I+SNTT+SR KNP + ETGGLSG PL S +L M +
Sbjct: 231 EADAQKLDGIIVSNTTLSRSG--LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDM 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ ++ +G SI E
Sbjct: 289 PLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
>sp|B9J901|PYRD_AGRRK Dihydroorotate dehydrogenase (quinone) OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=pyrD PE=3 SV=1
Length = 362
Score = 294 bits (753), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 215/360 (59%), Gaps = 26/360 (7%)
Query: 96 LLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGL 155
LLD E AH ++++A G VP + + L V G F+NPLG+AAG+DKNAE E L
Sbjct: 15 LLDPETAHGMSIAALKSGLVPTCRVSNDPRLRQIVAGLDFANPLGMAAGYDKNAEVPEAL 74
Query: 156 LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKR 215
L LGFGF E+G+VTP PQ GNP+PRIFRL ++ +INR GFN+EG A +RL G
Sbjct: 75 LKLGFGFTEIGTVTPKPQPGNPRPRIFRLVEDEGVINRLGFNNEGHEAALRRLQPIRGN- 133
Query: 216 KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVI 275
GI+GVNIG NK S D ADYV G+ A Y
Sbjct: 134 ------------------------GIIGVNIGANKDSADRIADYVAGIRRFYSVARYFTA 169
Query: 276 NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335
N+SSPNTPGLR LQ R+ L L+ V AARD+ P+ +KIAPDL++E ++DIA
Sbjct: 170 NISSPNTPGLRDLQARESLSALLSAVLAARDDEAAKAGKKIPVFLKIAPDLTEEGMDDIA 229
Query: 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A +A LDGLI+SNTT+SR D + AKE GGLSGKP+ S +L +M +
Sbjct: 230 AEVLAHALDGLIVSNTTLSR-DGLKDQVQAKEAGGLSGKPVFERSTVVLAKMRRRVGAAL 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIE 455
P+IG GG+SS E A KIRAGA LVQLY+ Y GP L ++ A L++ L+R+ SI E
Sbjct: 289 PIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGRVVAGLSKLLDRERVASIRE 348
>sp|A6WVY1|PYRD_OCHA4 Dihydroorotate dehydrogenase (quinone) OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=pyrD PE=3
SV=1
Length = 364
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/357 (47%), Positives = 215/357 (60%), Gaps = 26/357 (7%)
Query: 97 LDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLL 156
DAE AH L+++ G V DPA L ++V G +F NPLG+AAG+DKNAE + LL
Sbjct: 16 FDAEQAHGLSIAGLKTGLVTCGAPNDPA-LSVKVAGLQFPNPLGMAAGYDKNAEVPDALL 74
Query: 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216
LGFGF E+G++TP PQ GNP+PRIFRL ++ A+INR GFN+EG A KRL + GK
Sbjct: 75 KLGFGFTEIGTITPRPQSGNPRPRIFRLVEDRAVINRLGFNNEGHDAAFKRLSQRAGK-- 132
Query: 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276
GI+GVNIG NK +ED ADYV G+ Q A Y +N
Sbjct: 133 ----------------------SGIVGVNIGANKDAEDRIADYVAGIRRFYQLARYFTVN 170
Query: 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336
+SSPNTPGLR LQ R L++L+ +V AR+E P+ +KIAPDL+ E+L+DIAA
Sbjct: 171 ISSPNTPGLRNLQARDSLRELLSRVLEARNEEGKMCTLKRPVFLKIAPDLANEELDDIAA 230
Query: 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396
A +LDG+IISNTT+SR S ETGGLSG PL S +L M +P
Sbjct: 231 EATEQKLDGIIISNTTLSRAGLKSAEN-RDETGGLSGAPLFDRSTIVLARMRERVGPDMP 289
Query: 397 LIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSI 453
LIG GG+ S E A KI+AGA LVQLYT Y GP L +I L+ ++R+G +I
Sbjct: 290 LIGVGGVDSAETALTKIKAGADLVQLYTGLIYRGPNLPAEIVRGLSAAVKREGVTNI 346
>sp|Q89VA7|PYRD_BRAJA Dihydroorotate dehydrogenase (quinone) OS=Bradyrhizobium japonicum
(strain USDA 110) GN=pyrD PE=3 SV=1
Length = 365
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/379 (45%), Positives = 228/379 (60%), Gaps = 32/379 (8%)
Query: 84 FSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAA 143
F A L P LD E AH LA+ R P + R D L + +G F NP+G+AA
Sbjct: 5 FDALSL--PVLRWLDPEDAHRLAIQGL-RFLPPVKPRADDPKLAVRAFGLNFPNPIGMAA 61
Query: 144 GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVA 203
GFDK+AE + LL LGFGFVE+GSVTP PQ GNP+PR+FRL ++ A+INR GFN++G
Sbjct: 62 GFDKSAEVPDALLRLGFGFVEIGSVTPKPQSGNPRPRLFRLERDEAVINRMGFNNDGADV 121
Query: 204 VAKRLGA--QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQ 261
+RL A QHG GI+GVN+G NK S D DYV+
Sbjct: 122 ALRRLAARAQHG--------------------------GIVGVNVGANKDSPDRVGDYVK 155
Query: 262 GVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321
+ + A Y INVSSPNTPGLR LQ L DL+ +V AR+ ++ + G P+L+K
Sbjct: 156 LIEAFAPVASYFTINVSSPNTPGLRNLQEGALLDDLLARVIDARERVRQ-KAGDTPVLLK 214
Query: 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN 381
IAPDLS L+D+ VA + R+DG+I+SNTTI+RP + + AKE GGLSG+PL LS
Sbjct: 215 IAPDLSLAQLDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQGGLSGRPLFRLST 274
Query: 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441
++ E Y+ G PL+G GG+ SG A KIRAGA+L+QLY++ Y G L+ +IK +L
Sbjct: 275 RMVAETYVRVEGAFPLVGVGGVDSGGAALTKIRAGASLIQLYSSLVYKGLGLVEEIKRDL 334
Query: 442 AECLERDGFKSIIEAVGAD 460
L R G S+ + VGAD
Sbjct: 335 TSTLLRTGRDSLSDIVGAD 353
>sp|B9JR03|PYRD_AGRVS Dihydroorotate dehydrogenase (quinone) OS=Agrobacterium vitis
(strain S4 / ATCC BAA-846) GN=pyrD PE=3 SV=1
Length = 363
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 216/368 (58%), Gaps = 25/368 (6%)
Query: 88 KLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDK 147
+ P L DAE AH L+++ +P+ PD L V G F NPLG+AAG+DK
Sbjct: 7 RFARPGLFLFDAETAHGLSIAGLKTSLMPKCHLPDDPRLAQTVAGLHFPNPLGMAAGYDK 66
Query: 148 NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKR 207
NAE + LLGLGFGF EVG++TP PQ GNPKPRIFRL ++ A+INR GFN++G A R
Sbjct: 67 NAEVPDELLGLGFGFAEVGTLTPKPQGGNPKPRIFRLVRDEAVINRLGFNNQGHEAAFAR 126
Query: 208 LGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS 267
L A+ + PG++G+NIG NK +ED ADYV G+
Sbjct: 127 LSARASR------------------------PGVVGINIGANKDAEDRIADYVTGIRRFY 162
Query: 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS 327
A Y N+SSPNTPGLR LQ + L L+ V AAR + P+ +KIAPDL+
Sbjct: 163 PLASYFTANISSPNTPGLRDLQAKDSLGHLLDAVLAARADEAAKAGRRVPVFLKIAPDLT 222
Query: 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387
+E ++DIA V +A LDGLI+SNTT+SR D ++ A E GGLSGKPL S +L M
Sbjct: 223 EEGMDDIAEVVLARDLDGLIVSNTTLSR-DGLTDTRQAGEAGGLSGKPLFEKSTAVLARM 281
Query: 388 YLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLER 447
+P+IG GG+SS + A KI+AGA LVQLY+ Y GP L I L++ L+R
Sbjct: 282 RHRVGSALPIIGVGGVSSAQTALEKIKAGADLVQLYSCMVYEGPGLPAAIVKGLSQALDR 341
Query: 448 DGFKSIIE 455
DG SI +
Sbjct: 342 DGIASIAQ 349
>sp|Q11M76|PYRD_MESSB Dihydroorotate dehydrogenase (quinone) OS=Mesorhizobium sp. (strain
BNC1) GN=pyrD PE=3 SV=1
Length = 363
Score = 291 bits (745), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 216/368 (58%), Gaps = 26/368 (7%)
Query: 88 KLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDK 147
+L P D E AH L+++A G + L + V G F NP+G+AAG+DK
Sbjct: 7 RLTRPVLFAFDPERAHELSIAALKTGIPFCSGGVQNSKLAVSVAGLNFPNPIGMAAGYDK 66
Query: 148 NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKR 207
NAE + LL LGFGF E G+VTP PQEGNP+PRIFRL ++ A+INR GFN+EG R
Sbjct: 67 NAEIPDALLNLGFGFAECGTVTPKPQEGNPRPRIFRLTRDRAVINRLGFNNEGHAQALAR 126
Query: 208 LGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS 267
L + GK GI+GVNIG N+ S D ADY +GV T +
Sbjct: 127 LSLRKGKS------------------------GIVGVNIGANRDSSDRMADYEEGVRTFA 162
Query: 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS 327
A YL IN+SSPNT GLR LQ R+ L +L+++V R+E + P+ +KIAPDLS
Sbjct: 163 AVASYLTINISSPNTTGLRGLQDRENLSELLQRVMRVRNEQAALIKRKVPVFLKIAPDLS 222
Query: 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387
+E L DIA + LDGLI+SNTT+SR + VS P A ETGGLSG+PL S +L +M
Sbjct: 223 EEALADIAQEVLEKGLDGLIVSNTTLSR-EGVSA-PAASETGGLSGEPLFERSTIVLAKM 280
Query: 388 YLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLER 447
L +P+IG GG+ S E A K+RAGA LVQLYT + GP L +I + LA E
Sbjct: 281 RRLVGPALPIIGVGGVHSAETALEKMRAGADLVQLYTGMVFAGPGLPARIVSRLAAYAEA 340
Query: 448 DGFKSIIE 455
+G SI E
Sbjct: 341 NGLNSIAE 348
>sp|B3PNN8|PYRD_RHIE6 Dihydroorotate dehydrogenase (quinone) OS=Rhizobium etli (strain
CIAT 652) GN=pyrD PE=3 SV=1
Length = 362
Score = 291 bits (745), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/375 (47%), Positives = 221/375 (58%), Gaps = 35/375 (9%)
Query: 89 LVNPF-------FALLDAEVAHTLAVSAAARGWVPR-EKRPDPAILGLEVWGRKFSNPLG 140
+++PF L D E AH ++++A G VP + PDP L V G F NPLG
Sbjct: 1 MIDPFKRLARKGLFLFDPETAHGMSIAALKSGLVPACQITPDPR-LRQTVAGLTFENPLG 59
Query: 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200
+AAG+DKNAE E LL LGFGF E+G+VTP PQ GNP+PRIFRL ++ A+INR GFN+EG
Sbjct: 60 MAAGYDKNAEVPEALLRLGFGFTEIGTVTPRPQSGNPRPRIFRLVEDEAVINRLGFNNEG 119
Query: 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYV 260
A +RL A GK G++GVNIG NK SED DYV
Sbjct: 120 HEAAFERLSALTGK-------------------------GVVGVNIGANKDSEDRITDYV 154
Query: 261 QGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320
G+ A Y N+SSPNTPGLR LQ R+ L L+ V AARDEM P+ +
Sbjct: 155 AGIRCFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEMAERSGRKIPVFL 214
Query: 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS 380
KIAPDL++E ++DIAA A+A LDGLI+SNTT+SR + + AKETGGLSG PL S
Sbjct: 215 KIAPDLTEEGMDDIAAEALAHPLDGLIVSNTTLSR-EGLKDQRQAKETGGLSGVPLFEKS 273
Query: 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440
+L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L I
Sbjct: 274 TAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGNIVRG 333
Query: 441 LAECLERDGFKSIIE 455
L+ L+R+ SI E
Sbjct: 334 LSGLLDREKAGSIRE 348
>sp|Q874I4|PYRD_CANAL Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=URA9 PE=1
SV=1
Length = 444
Score = 291 bits (745), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 238/413 (57%), Gaps = 32/413 (7%)
Query: 64 VIATGAYV-----STVDEATFCGWLFSATKLVNPFFALLDAEVAHTLAVSAAARGWVPR- 117
V A G Y S + E C + + T DAE H L + G PR
Sbjct: 46 VAAVGGYYCLDSRSAIHEYVLCPLIRTFT----------DAESGHKLGIFFMKYGLSPRL 95
Query: 118 ---EKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQE 174
K +LG++V+G K NP+GLAAG DK+ EA+E L GF +VE+GS+TP PQ
Sbjct: 96 LDDGKNDQSDVLGVQVFGHKLKNPIGLAAGLDKDGEAIESLFNCGFSYVEIGSITPEPQP 155
Query: 175 GNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGK--RKLDETSRTSSSPNDEVK 232
GNP+PR FRL ++ A+INR GFNS G V L + K K + + P
Sbjct: 156 GNPQPRFFRLPKDDAVINRYGFNSSGHFNVLATLKLRFNKLLNKFGTSHSSEQHPFSNAF 215
Query: 233 AGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRK 292
GK +LG+N+GKNK D DYV+GV L YAD LVINVSSPNTPGLR LQ
Sbjct: 216 QQGK----LLGINLGKNKFG-DEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEA 270
Query: 293 QLKDLVKKVQAARDEMQWGEEG-PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNT 351
+L +L+ V R+ + G PP+LVK+APDL++ ++E IA A ++DG+IISNT
Sbjct: 271 KLTNLLTTVVKERNVLGKNLLGNKPPVLVKVAPDLTEPEIESIANSAKEAKVDGIIISNT 330
Query: 352 TISRPDP---VSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGE 407
TI RP + + + GGLSGKPL LS L+ + T+ + LIGCGGIS+G+
Sbjct: 331 TIQRPVDRLLTTDKQLINQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGK 390
Query: 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGAD 460
DA +AGAT ++LYTAFAY GP L+ +I+ ELAE L ++G K+ + +G+D
Sbjct: 391 DALEFGKAGATFIELYTAFAYKGPGLVGKIRDELAEELRKEG-KTWEQIIGSD 442
>sp|Q2KCS8|PYRD_RHIEC Dihydroorotate dehydrogenase (quinone) OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=pyrD PE=3 SV=1
Length = 362
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 175/373 (46%), Positives = 216/373 (57%), Gaps = 35/373 (9%)
Query: 89 LVNPF-------FALLDAEVAHTLAVSAAARGWVPR-EKRPDPAILGLEVWGRKFSNPLG 140
+++PF L D E AH ++++A G VP + PDP L + G F NPLG
Sbjct: 1 MIDPFQRLARRGLFLFDPETAHGMSIAALKSGLVPACQIAPDPR-LRQTIAGLTFENPLG 59
Query: 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200
+AAG+DKNAE E LL LGFGF E+G+VTP PQ GNP+PRIFRL ++ A+INR GFN+EG
Sbjct: 60 MAAGYDKNAEVPEALLKLGFGFTEIGTVTPKPQSGNPRPRIFRLVEDEAVINRLGFNNEG 119
Query: 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYV 260
A +RL G GI GVNIG NK SED ADYV
Sbjct: 120 HEAAFRRLAEL-------------------------TGTGIFGVNIGANKDSEDRIADYV 154
Query: 261 QGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320
G+ A Y N+SSPNTPGLR LQ R+ L L+ V A RDEM P+ +
Sbjct: 155 AGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAVRDEMAEKSGRKIPVFL 214
Query: 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS 380
KIAPDL++E ++DIAA A+A LDGLI+SNTT+SR D + AKE GGLSG PL S
Sbjct: 215 KIAPDLTEEGMDDIAAEALAHPLDGLIVSNTTLSR-DGLKDQRQAKEAGGLSGVPLFEKS 273
Query: 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440
+L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L I
Sbjct: 274 TAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGTIVRG 333
Query: 441 LAECLERDGFKSI 453
L+ L+R+ SI
Sbjct: 334 LSALLDREKAGSI 346
>sp|B8JDF0|PYRD_ANAD2 Dihydroorotate dehydrogenase (quinone) OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pyrD PE=3
SV=1
Length = 364
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/372 (46%), Positives = 228/372 (61%), Gaps = 34/372 (9%)
Query: 97 LDAEVAHTLAVSAAARG--WVPREKRPD--PAILGLEVWGRKFSNPLGLAAGFDKNAEAV 152
LD E H LA A R V R +RP PA L + G F P+GLAAGFDK A+
Sbjct: 13 LDPERVHHLAHWALHRVPLAVARARRPASIPA-LAVRCMGLDFDGPVGLAAGFDKGDVAL 71
Query: 153 EGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQH 212
GL GLGF VE+G++TP PQ GN +PR+FRL + A++NR GFN+EG+ A A+RL A
Sbjct: 72 PGLFGLGFSHVEIGTITPRPQPGNDRPRLFRLPEHRALLNRMGFNNEGMEACARRLAA-- 129
Query: 213 GKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTS--EDAAADYVQGVHTLSQYA 270
+ + GP +G+N+GKNK + EDAAADY+ + L YA
Sbjct: 130 ------------------LPPAARLGP--VGINVGKNKVTPNEDAAADYLACIERLHPYA 169
Query: 271 DYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330
DYLV+N+SSPNTPGLR LQ R L L++ E G+ PLLVK+APDLS E
Sbjct: 170 DYLVVNISSPNTPGLRQLQERDALDRLLRACVRHLAERAPGK----PLLVKLAPDLSPEA 225
Query: 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL 390
L++ VA+A G++ +NTT+SR V ++P A E GGLSG PL L+ ++++ Y
Sbjct: 226 LDEAVDVAIAAGAAGIVATNTTLSRAG-VERHPRAAEAGGLSGAPLERLATDVVRRCYAR 284
Query: 391 TRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450
G++P++G GG+ E AY KIRAGATLVQ YT YGGPA + ++ A LA LERDGF
Sbjct: 285 AAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGPAFVGRVNAGLARLLERDGF 344
Query: 451 KSIIEAVGADYR 462
++ +AVGAD+R
Sbjct: 345 STLSDAVGADHR 356
>sp|B4UG99|PYRD_ANASK Dihydroorotate dehydrogenase (quinone) OS=Anaeromyxobacter sp.
(strain K) GN=pyrD PE=3 SV=1
Length = 364
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/371 (45%), Positives = 225/371 (60%), Gaps = 32/371 (8%)
Query: 97 LDAEVAHTLAVSAAARG--WVPREKRPDP-AILGLEVWGRKFSNPLGLAAGFDKNAEAVE 153
LD E H LA A R V R +RP P L + G F P+GLAAGFDK A+
Sbjct: 13 LDPERVHHLAHWALHRVPLAVARARRPAPIPALAVRCMGLDFDGPVGLAAGFDKGDVALP 72
Query: 154 GLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHG 213
GL GLGF VE+G++TP PQ GN +PR+FRL + A++NR GFN+EG+ A A+RL A
Sbjct: 73 GLFGLGFSHVEIGTITPRPQPGNDRPRLFRLPEHRALLNRMGFNNEGMEACARRLAA--- 129
Query: 214 KRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTS--EDAAADYVQGVHTLSQYAD 271
+ + GP +G+N+GKNK + EDAAADY+ + L YAD
Sbjct: 130 -----------------LPPAARLGP--VGINVGKNKVTPNEDAAADYLACIERLHPYAD 170
Query: 272 YLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDL 331
YLV+N+SSPNTPGLR LQ R L L++ E G+ PLLVK+APDLS E L
Sbjct: 171 YLVVNISSPNTPGLRQLQERDALDRLLRACVRHLAERAPGK----PLLVKLAPDLSPEAL 226
Query: 332 EDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391
++ VA+A G++ +NTT+SR V ++P A E GGLSG PL L+ ++++ Y
Sbjct: 227 DEAVDVAIAAGAAGIVATNTTLSRAG-VERHPRAAEAGGLSGAPLERLATDVVRRCYARA 285
Query: 392 RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451
G++P++G GG+ E AY KIRAGATLVQ YT YGGP + ++ A LA LERD F
Sbjct: 286 AGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGPGFVGRVNAGLARLLERDEFS 345
Query: 452 SIIEAVGADYR 462
++ +A+GAD+R
Sbjct: 346 TLSDAIGADHR 356
>sp|Q92S77|PYRD_RHIME Dihydroorotate dehydrogenase (quinone) OS=Rhizobium meliloti
(strain 1021) GN=pyrD PE=3 SV=1
Length = 362
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/358 (46%), Positives = 208/358 (58%), Gaps = 26/358 (7%)
Query: 96 LLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGL 155
L D E AH L++ A G VP P LG V G FSNP+G+AAG+DKNAE E L
Sbjct: 15 LFDPEAAHGLSIKALKSGLVPSCAAPADPRLGQTVAGLVFSNPIGMAAGYDKNAEVPEAL 74
Query: 156 LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKR 215
L +GFGF E+G+VTP PQ GN KPR+FRL ++ A+INR GFN+EG A RL A
Sbjct: 75 LKIGFGFTEIGTVTPRPQAGNDKPRLFRLVEDEAVINRLGFNNEGHGAALARLKA----- 129
Query: 216 KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVI 275
SR + ++GVNIG NK S D ADYV G+ T A Y
Sbjct: 130 ----CSREA----------------LIGVNIGANKDSADRIADYVTGIRTFYAVARYFTA 169
Query: 276 NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335
N+SSPNTPGLR LQ R+ L L+ V AARD+ P+ +KIAPDL++E ++DIA
Sbjct: 170 NISSPNTPGLRDLQARESLSALLSAVLAARDDEARKGGRQVPVFLKIAPDLTEEGMDDIA 229
Query: 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A +A LDGLI+SNTT+SR + + A E GGLSGKPL S +L M +
Sbjct: 230 AEVLAHGLDGLIVSNTTLSR-EGLKDRRQANEAGGLSGKPLFEKSTAVLARMRKRVGPHL 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSI 453
P+IG GG+ S E A KIRAGA LVQLY+ Y GP L +I L+ ER+ SI
Sbjct: 289 PIIGVGGVCSAETAAEKIRAGADLVQLYSCMIYEGPGLPGRIVRGLSALCEREKLASI 346
>sp|B5EL46|PYRD_ACIF5 Dihydroorotate dehydrogenase (quinone) OS=Acidithiobacillus
ferrooxidans (strain ATCC 53993) GN=pyrD PE=3 SV=1
Length = 363
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 229/385 (59%), Gaps = 42/385 (10%)
Query: 89 LVNPFFALLDAEVAHTLAVSA-AARGWVPR--------EKRPDPAILGLEVWGRKFSNPL 139
L+ P LD E AHTL+++A A G +PR DP L + WG F+NP+
Sbjct: 5 LLRPLLFTLDPERAHTLSIAALEALGHMPRGLARVARRYTAHDPR-LAQDFWGLHFANPV 63
Query: 140 GLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSE 199
GLAAG+DK+A A L LGFGF+E+G+VTP PQ GNP+PR+FR + A+INR GF E
Sbjct: 64 GLAAGYDKDARATAALPALGFGFIEIGTVTPRPQPGNPRPRVFRYPAQQAVINRMGFPGE 123
Query: 200 GIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTS--EDAAA 257
G AVA+RL A G P +G+N+GKNK + E A
Sbjct: 124 GAAAVARRLAALPGH------------------------PVPIGINLGKNKDTPLERAQD 159
Query: 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP- 316
DYV + L Y DYL INVSSPNTPGLR+LQG + L+ L+K V AA + + PP
Sbjct: 160 DYVAALELLFHYGDYLCINVSSPNTPGLRLLQGEEALRGLLKAVAAANQRLALQHQRPPL 219
Query: 317 PLLVKIAPDLSKEDLEDIAAVAV--ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374
PLL+KIAPDL +DL I ++A+ A ++G I +NTTI RP + P E+GGLSG
Sbjct: 220 PLLLKIAPDLDNDDLNAIGSLALGTAPLVNGFIATNTTIERP---ASQPGLSESGGLSGA 276
Query: 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 434
PLL SN ++ ++Y T+G++P+IG GGI S DAY KI AGA+LVQ+Y+ + GP L+
Sbjct: 277 PLLQQSNAVIAQLYRATQGQVPIIGVGGILSAADAYAKILAGASLVQVYSGLIFRGPGLV 336
Query: 435 PQIKAELAECLERDGFKSIIEAVGA 459
+I EL +DG+ + A G+
Sbjct: 337 REILEELPGLWLKDGYPDLAHARGS 361
>sp|B7J5Q1|PYRD_ACIF2 Dihydroorotate dehydrogenase (quinone) OS=Acidithiobacillus
ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)
GN=pyrD PE=3 SV=1
Length = 363
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 229/385 (59%), Gaps = 42/385 (10%)
Query: 89 LVNPFFALLDAEVAHTLAVSA-AARGWVPR--------EKRPDPAILGLEVWGRKFSNPL 139
L+ P LD E AHTL+++A A G +PR DP L + WG F+NP+
Sbjct: 5 LLRPLLFTLDPERAHTLSIAALEALGHMPRGLARVARRYTAHDPR-LAQDFWGLHFANPV 63
Query: 140 GLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSE 199
GLAAG+DK+A A L LGFGF+E+G+VTP PQ GNP+PR+FR + A+INR GF E
Sbjct: 64 GLAAGYDKDARATAALPALGFGFIEIGTVTPRPQPGNPRPRVFRYPAQQAVINRMGFPGE 123
Query: 200 GIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTS--EDAAA 257
G AVA+RL A G P +G+N+GKNK + E A
Sbjct: 124 GAAAVARRLAALPGH------------------------PVPIGINLGKNKDTPLERAQD 159
Query: 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP- 316
DYV + L Y DYL INVSSPNTPGLR+LQG + L+ L+K V AA + + PP
Sbjct: 160 DYVAALELLFHYGDYLCINVSSPNTPGLRLLQGEEALRGLLKAVAAANQRLALQHQRPPL 219
Query: 317 PLLVKIAPDLSKEDLEDIAAVAV--ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374
PLL+KIAPDL +DL I ++A+ A ++G I +NTTI RP + P E+GGLSG
Sbjct: 220 PLLLKIAPDLDNDDLNAIGSLALGTAPLVNGFIATNTTIERP---ASQPGLSESGGLSGA 276
Query: 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 434
PLL SN ++ ++Y T+G++P+IG GGI S DAY KI AGA+LVQ+Y+ + GP L+
Sbjct: 277 PLLQQSNAVIAQLYRATQGQVPIIGVGGILSAADAYAKILAGASLVQVYSGLIFRGPGLV 336
Query: 435 PQIKAELAECLERDGFKSIIEAVGA 459
+I EL +DG+ + A G+
Sbjct: 337 REILEELPGLWLKDGYPDLAHARGS 361
>sp|A9CK85|PYRD_AGRT5 Dihydroorotate dehydrogenase (quinone) OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=pyrD PE=3 SV=1
Length = 363
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 209/358 (58%), Gaps = 26/358 (7%)
Query: 96 LLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGL 155
L+D E AH L+V+A G++P P L V G F NPLG+AAG+DKNAE L
Sbjct: 15 LIDPEKAHGLSVAALKSGFLPTCMVPHDPRLQQTVAGLVFPNPLGMAAGYDKNAEVPGPL 74
Query: 156 LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKR 215
L LGFGF E+G+VTP Q GNPKPRIFRL ++ +INR GFN+EG A +RL +
Sbjct: 75 LRLGFGFTEIGTVTPRAQSGNPKPRIFRLVEDEGVINRLGFNNEGHAAALERLTQARLR- 133
Query: 216 KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVI 275
GI+GVNIG NK SED ADYVQG+ A Y +
Sbjct: 134 ------------------------GIVGVNIGANKDSEDRIADYVQGIEAFYAVASYFTV 169
Query: 276 NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335
N+SSPNTPGLR LQ R+ L L+ V R P+ +KIAPDL++E L+D+A
Sbjct: 170 NISSPNTPGLRDLQARESLAALLTAVLERRKTEAERLGKRIPIFLKIAPDLTEEGLDDVA 229
Query: 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395
A+A LDGLI+SNTT+SR + + P E GGLSGKPL LS +L +M +
Sbjct: 230 EEALAHDLDGLIVSNTTLSR-EGLRPGPHRGEAGGLSGKPLFELSTTVLAKMRRRVGANL 288
Query: 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSI 453
P+IG GG+SS E A K+RAGA LVQLY+ Y GP L I +++ + R+G ++I
Sbjct: 289 PIIGVGGVSSAETALEKVRAGADLVQLYSCMVYEGPGLPSAIVKGMSKLVAREGVETI 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,530,238
Number of Sequences: 539616
Number of extensions: 7927413
Number of successful extensions: 31282
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 29241
Number of HSP's gapped (non-prelim): 809
length of query: 462
length of database: 191,569,459
effective HSP length: 121
effective length of query: 341
effective length of database: 126,275,923
effective search space: 43060089743
effective search space used: 43060089743
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)