Query 012517
Match_columns 462
No_of_seqs 338 out of 2667
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:58:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012517.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012517hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i65_A Dihydroorotate dehydrog 100.0 2E-85 6.9E-90 678.8 31.9 373 66-462 29-413 (415)
2 3zwt_A Dihydroorotate dehydrog 100.0 2.8E-82 9.7E-87 650.4 35.6 356 87-462 10-366 (367)
3 1tv5_A Dhodehase, dihydroorota 100.0 1.3E-77 4.6E-82 627.6 34.5 382 60-462 16-441 (443)
4 3tjx_A Dihydroorotate dehydrog 100.0 2.6E-67 8.8E-72 537.9 29.9 324 96-462 13-345 (354)
5 4ef8_A Dihydroorotate dehydrog 100.0 4.3E-65 1.5E-69 519.9 30.2 304 118-461 29-344 (354)
6 3oix_A Putative dihydroorotate 100.0 2.1E-63 7.1E-68 506.2 25.9 302 122-461 34-342 (345)
7 1f76_A Dihydroorotate dehydrog 100.0 2.3E-60 7.8E-65 482.7 31.5 327 88-441 4-336 (336)
8 1jub_A Dihydroorotate dehydrog 100.0 1E-55 3.4E-60 443.7 26.9 300 126-462 2-310 (311)
9 2e6f_A Dihydroorotate dehydrog 100.0 4.2E-53 1.4E-57 425.2 29.6 299 124-462 2-312 (314)
10 1ep3_A Dihydroorotate dehydrog 100.0 1.1E-45 3.7E-50 369.6 24.3 299 121-461 2-307 (311)
11 1gte_A Dihydropyrimidine dehyd 100.0 6.1E-41 2.1E-45 384.3 30.5 300 121-458 528-851 (1025)
12 1p0k_A Isopentenyl-diphosphate 99.9 3.7E-25 1.3E-29 225.4 26.8 262 121-460 40-325 (349)
13 3gr7_A NADPH dehydrogenase; fl 99.9 1E-24 3.6E-29 221.6 27.2 277 127-442 8-325 (340)
14 3hgj_A Chromate reductase; TIM 99.9 1.1E-24 3.7E-29 222.2 25.2 282 127-442 7-336 (349)
15 1z41_A YQJM, probable NADH-dep 99.9 1.1E-23 3.8E-28 213.8 28.5 276 127-442 8-325 (338)
16 3l5l_A Xenobiotic reductase A; 99.9 1.6E-24 5.4E-29 222.1 20.2 281 127-442 7-343 (363)
17 3kru_A NADH:flavin oxidoreduct 99.9 1.1E-23 3.6E-28 214.3 21.2 275 127-438 7-321 (343)
18 3l5a_A NADH/flavin oxidoreduct 99.9 1.3E-22 4.6E-27 211.2 25.3 301 113-442 13-364 (419)
19 1vhn_A Putative flavin oxidore 99.9 3.5E-23 1.2E-27 208.3 17.7 221 133-441 1-230 (318)
20 2gou_A Oxidoreductase, FMN-bin 99.9 5.1E-22 1.7E-26 203.6 24.5 273 127-441 8-339 (365)
21 3b0p_A TRNA-dihydrouridine syn 99.9 8.8E-23 3E-27 208.2 15.5 170 241-441 59-242 (350)
22 1o94_A Tmadh, trimethylamine d 99.9 2E-21 6.8E-26 215.5 26.4 286 127-441 12-338 (729)
23 1vyr_A Pentaerythritol tetrani 99.9 2.7E-21 9.4E-26 198.1 23.5 274 127-441 8-340 (364)
24 2hsa_B 12-oxophytodienoate red 99.9 4.1E-21 1.4E-25 199.2 24.0 283 127-441 21-365 (402)
25 1ps9_A 2,4-dienoyl-COA reducta 99.9 6.7E-21 2.3E-25 209.2 27.1 282 127-442 8-328 (671)
26 2r14_A Morphinone reductase; H 99.9 3.1E-21 1.1E-25 198.5 22.2 274 127-440 14-344 (377)
27 3gka_A N-ethylmaleimide reduct 99.9 2.9E-21 9.8E-26 197.5 21.8 265 127-441 15-333 (361)
28 3aty_A Tcoye, prostaglandin F2 99.9 2.4E-21 8.2E-26 199.4 21.0 271 127-441 10-353 (379)
29 4ab4_A Xenobiotic reductase B; 99.9 4.4E-21 1.5E-25 196.2 22.3 265 127-441 7-325 (362)
30 3k30_A Histamine dehydrogenase 99.9 4.8E-21 1.7E-25 211.0 22.4 283 127-442 17-342 (690)
31 1icp_A OPR1, 12-oxophytodienoa 99.9 5.8E-21 2E-25 196.5 20.3 275 127-441 19-347 (376)
32 3sgz_A Hydroxyacid oxidase 2; 99.8 4.5E-19 1.5E-23 180.1 27.4 288 98-460 29-346 (352)
33 2nli_A Lactate oxidase; flavoe 99.8 4.3E-19 1.5E-23 182.0 26.1 254 113-460 56-358 (368)
34 1vcf_A Isopentenyl-diphosphate 99.8 5E-20 1.7E-24 186.4 17.7 259 122-462 44-331 (332)
35 2nzl_A Hydroxyacid oxidase 1; 99.8 5.3E-19 1.8E-23 182.7 25.4 268 98-460 54-381 (392)
36 1kbi_A Cytochrome B2, L-LCR; f 99.8 3.5E-18 1.2E-22 182.1 28.7 253 114-459 166-476 (511)
37 1gox_A (S)-2-hydroxy-acid oxid 99.8 1.7E-18 5.7E-23 177.8 24.7 253 113-460 47-354 (370)
38 3sr7_A Isopentenyl-diphosphate 99.8 1.7E-18 5.7E-23 177.1 22.3 258 120-460 70-352 (365)
39 4a3u_A NCR, NADH\:flavin oxido 99.8 5.4E-18 1.8E-22 173.3 23.3 275 127-441 7-332 (358)
40 4gbu_A NADPH dehydrogenase 1; 99.8 1.9E-18 6.5E-23 179.1 19.0 281 127-441 20-365 (400)
41 3vkj_A Isopentenyl-diphosphate 99.8 1.6E-18 5.4E-23 177.7 17.9 267 120-460 43-340 (368)
42 3tjl_A NADPH dehydrogenase; OL 99.8 4.3E-19 1.5E-23 183.6 13.0 278 127-441 17-363 (407)
43 1ypf_A GMP reductase; GUAC, pu 99.8 1E-16 3.4E-21 162.5 26.4 249 114-458 21-319 (336)
44 1p4c_A L(+)-mandelate dehydrog 99.7 2.4E-16 8.3E-21 162.3 23.4 134 290-459 209-351 (380)
45 1eep_A Inosine 5'-monophosphat 99.7 2.5E-14 8.6E-19 148.2 26.2 284 115-459 18-381 (404)
46 2qr6_A IMP dehydrogenase/GMP r 99.6 6.6E-14 2.3E-18 144.5 22.5 270 120-459 51-388 (393)
47 3r2g_A Inosine 5'-monophosphat 99.6 4.8E-13 1.7E-17 136.3 26.9 232 124-458 30-316 (361)
48 1mzh_A Deoxyribose-phosphate a 99.6 5.2E-15 1.8E-19 141.9 8.6 120 268-425 82-206 (225)
49 2c6q_A GMP reductase 2; TIM ba 99.5 9.7E-13 3.3E-17 134.0 25.2 249 114-459 27-340 (351)
50 2z6i_A Trans-2-enoyl-ACP reduc 99.5 5.4E-13 1.8E-17 134.8 21.2 195 135-441 11-210 (332)
51 3khj_A Inosine-5-monophosphate 99.5 1.1E-11 3.7E-16 126.7 26.2 206 121-427 29-240 (361)
52 3bo9_A Putative nitroalkan dio 99.5 2.9E-12 1E-16 129.2 21.7 199 133-442 23-225 (326)
53 1ea0_A Glutamate synthase [NAD 99.4 3E-12 1E-16 148.0 18.1 154 286-460 972-1165(1479)
54 2gjl_A Hypothetical protein PA 99.4 6.7E-11 2.3E-15 119.0 24.6 140 241-432 69-209 (328)
55 3bw2_A 2-nitropropane dioxygen 99.4 5.2E-11 1.8E-15 121.8 21.9 126 258-433 113-246 (369)
56 1ofd_A Ferredoxin-dependent gl 99.4 5.2E-12 1.8E-16 146.3 15.8 154 285-460 1006-1200(1520)
57 1jcn_A Inosine monophosphate d 99.3 3.4E-11 1.2E-15 128.4 19.5 178 241-458 245-481 (514)
58 4fo4_A Inosine 5'-monophosphat 99.3 8E-10 2.7E-14 113.0 27.2 241 120-458 29-334 (366)
59 3ffs_A Inosine-5-monophosphate 99.3 3.5E-10 1.2E-14 116.7 21.7 132 258-427 147-279 (400)
60 1xm3_A Thiazole biosynthesis p 99.2 1.6E-09 5.4E-14 106.0 23.2 209 127-428 3-212 (264)
61 4avf_A Inosine-5'-monophosphat 99.2 5.1E-10 1.8E-14 118.7 19.5 177 241-459 219-459 (490)
62 4fxs_A Inosine-5'-monophosphat 99.1 1.5E-09 5.1E-14 115.3 20.1 176 241-458 221-457 (496)
63 1vrd_A Inosine-5'-monophosphat 99.1 1E-09 3.5E-14 116.3 17.0 177 241-458 227-461 (494)
64 3usb_A Inosine-5'-monophosphat 99.1 3.1E-09 1E-13 113.3 18.4 176 241-458 246-480 (511)
65 2nv1_A Pyridoxal biosynthesis 99.0 3E-10 1E-14 113.3 8.8 81 379-461 194-278 (305)
66 1geq_A Tryptophan synthase alp 99.0 4.9E-09 1.7E-13 100.8 14.0 191 241-445 6-245 (248)
67 1wv2_A Thiazole moeity, thiazo 99.0 4.3E-07 1.5E-11 87.8 26.3 211 127-428 10-221 (265)
68 1rd5_A Tryptophan synthase alp 98.9 1.7E-07 5.9E-12 91.0 20.2 157 258-428 33-235 (262)
69 2y88_A Phosphoribosyl isomeras 98.8 1.8E-08 6.3E-13 96.3 12.6 90 330-441 150-242 (244)
70 2zbt_A Pyridoxal biosynthesis 98.8 5.5E-09 1.9E-13 103.5 8.8 81 379-461 194-278 (297)
71 1h5y_A HISF; histidine biosynt 98.8 4.4E-08 1.5E-12 93.3 14.6 108 318-451 141-250 (253)
72 3igs_A N-acetylmannosamine-6-p 98.8 1.7E-07 6E-12 89.9 17.9 127 269-445 101-227 (232)
73 3q58_A N-acetylmannosamine-6-p 98.8 1.4E-07 4.7E-12 90.4 16.3 114 269-427 101-214 (229)
74 2qjg_A Putative aldolase MJ040 98.8 6.1E-07 2.1E-11 87.4 20.1 142 269-458 112-268 (273)
75 1me8_A Inosine-5'-monophosphat 98.7 2.8E-07 9.7E-12 97.9 19.0 155 269-458 254-471 (503)
76 1y0e_A Putative N-acetylmannos 98.7 2.5E-07 8.7E-12 87.2 16.5 120 269-427 88-208 (223)
77 3vnd_A TSA, tryptophan synthas 98.7 5.2E-07 1.8E-11 88.4 18.9 168 252-428 30-240 (267)
78 2uva_G Fatty acid synthase bet 98.7 2.1E-07 7.3E-12 112.5 19.1 148 240-428 638-800 (2060)
79 1vzw_A Phosphoribosyl isomeras 98.7 1.8E-07 6.2E-12 89.6 14.8 90 330-441 147-239 (244)
80 1zfj_A Inosine monophosphate d 98.7 6.4E-07 2.2E-11 94.6 19.1 155 269-458 245-460 (491)
81 1qop_A Tryptophan synthase alp 98.7 1.1E-06 3.7E-11 85.9 19.2 174 242-428 19-239 (268)
82 3nav_A Tryptophan synthase alp 98.7 2E-06 6.9E-11 84.3 20.8 168 252-428 32-242 (271)
83 2w6r_A Imidazole glycerol phos 98.6 8.6E-08 2.9E-12 92.9 10.2 95 330-450 157-251 (266)
84 1wa3_A 2-keto-3-deoxy-6-phosph 98.6 3.4E-07 1.1E-11 85.3 13.8 170 241-445 11-200 (205)
85 3tdn_A FLR symmetric alpha-bet 98.6 3.9E-09 1.3E-13 101.7 0.0 90 330-441 157-246 (247)
86 2agk_A 1-(5-phosphoribosyl)-5- 98.6 6.5E-08 2.2E-12 94.4 8.7 137 268-441 95-256 (260)
87 4adt_A Pyridoxine biosynthetic 98.6 2.8E-07 9.5E-12 91.6 11.4 79 379-459 194-276 (297)
88 1thf_D HISF protein; thermophI 98.5 4.6E-07 1.6E-11 87.0 12.3 95 330-450 152-246 (253)
89 1ka9_F Imidazole glycerol phos 98.5 5E-07 1.7E-11 86.7 12.5 95 330-450 153-247 (252)
90 2ekc_A AQ_1548, tryptophan syn 98.5 6E-06 2E-10 80.4 20.0 47 380-429 194-240 (262)
91 1yxy_A Putative N-acetylmannos 98.5 1E-06 3.4E-11 83.9 14.1 117 269-427 101-219 (234)
92 2htm_A Thiazole biosynthesis p 98.5 1.8E-05 6.3E-10 76.6 22.4 204 128-428 4-212 (268)
93 3tdn_A FLR symmetric alpha-bet 98.5 3.8E-07 1.3E-11 87.7 10.5 102 318-441 22-125 (247)
94 4af0_A Inosine-5'-monophosphat 98.5 1.2E-05 4.2E-10 84.9 22.3 145 241-426 271-416 (556)
95 3ovp_A Ribulose-phosphate 3-ep 98.5 1.2E-05 4.1E-10 76.8 20.0 214 137-449 8-225 (228)
96 1ujp_A Tryptophan synthase alp 98.5 2.6E-06 8.9E-11 83.5 15.0 174 258-446 31-254 (271)
97 1jvn_A Glutamine, bifunctional 98.5 7.2E-07 2.5E-11 95.9 11.9 95 330-450 453-548 (555)
98 1h1y_A D-ribulose-5-phosphate 98.4 5.1E-05 1.8E-09 72.0 22.8 207 141-446 14-222 (228)
99 3oa3_A Aldolase; structural ge 98.4 2.9E-06 9.8E-11 83.5 14.3 126 266-426 136-266 (288)
100 3f4w_A Putative hexulose 6 pho 98.4 4.4E-06 1.5E-10 77.9 14.5 154 241-447 55-209 (211)
101 1qo2_A Molecule: N-((5-phospho 98.4 7.9E-07 2.7E-11 85.0 8.6 89 330-440 145-239 (241)
102 3qja_A IGPS, indole-3-glycerol 98.4 9.2E-06 3.1E-10 79.7 16.2 123 260-432 128-250 (272)
103 3ngj_A Deoxyribose-phosphate a 98.3 2.3E-06 7.7E-11 82.3 11.2 122 267-426 106-232 (239)
104 2cu0_A Inosine-5'-monophosphat 98.2 5.8E-06 2E-10 87.4 12.8 125 315-458 268-452 (486)
105 1thf_D HISF protein; thermophI 98.2 3.9E-06 1.3E-10 80.5 10.4 91 329-441 30-120 (253)
106 1h5y_A HISF; histidine biosynt 98.2 4.5E-06 1.5E-10 79.2 10.6 91 329-441 33-123 (253)
107 1ka9_F Imidazole glycerol phos 98.2 4.5E-06 1.5E-10 80.0 10.4 91 329-441 31-121 (252)
108 2v82_A 2-dehydro-3-deoxy-6-pho 98.2 1.6E-05 5.6E-10 74.2 13.9 157 241-428 8-181 (212)
109 3o07_A Pyridoxine biosynthesis 98.2 1.9E-05 6.5E-10 77.0 14.3 146 260-428 24-234 (291)
110 1w8s_A FBP aldolase, fructose- 98.2 6.4E-05 2.2E-09 73.2 18.3 142 269-457 105-261 (263)
111 3r12_A Deoxyribose-phosphate a 98.2 2.4E-05 8.2E-10 75.9 14.7 120 267-426 122-248 (260)
112 3tha_A Tryptophan synthase alp 98.2 1.1E-05 3.6E-10 78.3 12.1 160 258-428 29-232 (252)
113 1tqj_A Ribulose-phosphate 3-ep 98.2 4.4E-05 1.5E-09 72.8 16.3 196 138-432 9-209 (230)
114 2yzr_A Pyridoxal biosynthesis 98.2 3.6E-05 1.2E-09 76.9 16.1 46 381-428 229-276 (330)
115 3ndo_A Deoxyribose-phosphate a 98.2 2.7E-05 9.2E-10 74.5 14.1 124 266-426 90-222 (231)
116 2pgw_A Muconate cycloisomerase 98.1 3.5E-05 1.2E-09 78.8 15.4 134 258-438 150-285 (384)
117 1yad_A Regulatory protein TENI 98.1 1.4E-05 4.8E-10 75.3 11.5 95 335-450 123-217 (221)
118 1rpx_A Protein (ribulose-phosp 98.1 0.00013 4.6E-09 68.9 18.0 196 138-432 15-215 (230)
119 3inp_A D-ribulose-phosphate 3- 98.1 8.6E-05 2.9E-09 71.7 16.1 209 138-445 32-243 (246)
120 2ovl_A Putative racemase; stru 98.1 0.00012 4.3E-09 74.3 17.8 144 258-450 149-294 (371)
121 1qo2_A Molecule: N-((5-phospho 98.1 4.2E-06 1.4E-10 79.9 6.5 88 330-441 31-118 (241)
122 3tsm_A IGPS, indole-3-glycerol 98.1 9.4E-05 3.2E-09 72.5 16.1 119 269-435 142-260 (272)
123 1rvk_A Isomerase/lactonizing e 98.0 0.00012 4.2E-09 74.6 17.3 150 258-450 152-304 (382)
124 2tps_A Protein (thiamin phosph 98.0 5.8E-05 2E-09 70.9 13.2 103 318-442 117-221 (227)
125 2uv8_G Fatty acid synthase sub 98.0 5.1E-05 1.8E-09 91.7 15.6 148 240-429 645-808 (2051)
126 1jvn_A Glutamine, bifunctional 98.0 1.7E-05 5.7E-10 85.3 10.0 95 329-441 280-397 (555)
127 2nql_A AGR_PAT_674P, isomerase 98.0 8.2E-05 2.8E-09 76.2 14.7 135 257-438 166-302 (388)
128 1mdl_A Mandelate racemase; iso 98.0 0.00011 3.9E-09 74.2 15.6 145 257-450 146-292 (359)
129 3vk5_A MOEO5; TIM barrel, tran 98.0 2.6E-05 9E-10 76.3 10.1 85 331-440 188-274 (286)
130 1ub3_A Aldolase protein; schif 97.9 0.00017 5.9E-09 68.5 15.0 121 267-425 82-207 (220)
131 2yw3_A 4-hydroxy-2-oxoglutarat 97.9 4.2E-05 1.4E-09 71.9 10.4 61 381-446 139-199 (207)
132 1viz_A PCRB protein homolog; s 97.9 2.5E-05 8.6E-10 75.2 8.7 57 378-437 167-224 (240)
133 2fli_A Ribulose-phosphate 3-ep 97.9 0.00029 1E-08 65.8 15.9 207 137-443 7-216 (220)
134 3vzx_A Heptaprenylglyceryl pho 97.9 8.1E-05 2.8E-09 71.0 12.0 88 328-442 139-226 (228)
135 2y88_A Phosphoribosyl isomeras 97.9 2.8E-05 9.7E-10 74.0 8.9 89 330-441 32-120 (244)
136 1vzw_A Phosphoribosyl isomeras 97.9 3.2E-05 1.1E-09 73.8 8.3 89 330-441 33-121 (244)
137 3cwo_X Beta/alpha-barrel prote 97.9 9.8E-05 3.4E-09 68.5 11.5 95 330-450 131-225 (237)
138 2w6r_A Imidazole glycerol phos 97.8 3.8E-05 1.3E-09 74.1 8.9 89 330-439 31-121 (266)
139 2rdx_A Mandelate racemase/muco 97.8 0.00018 6.1E-09 73.4 13.8 140 258-450 148-289 (379)
140 2og9_A Mandelate racemase/muco 97.8 0.00028 9.7E-09 72.3 15.0 126 257-426 164-291 (393)
141 3ctl_A D-allulose-6-phosphate 97.8 0.00027 9.2E-09 67.5 13.6 210 138-446 5-218 (231)
142 3glc_A Aldolase LSRF; TIM barr 97.8 0.0015 5.3E-08 64.5 19.2 108 315-458 171-288 (295)
143 1n7k_A Deoxyribose-phosphate a 97.8 0.00062 2.1E-08 65.2 15.7 117 268-425 100-223 (234)
144 2hzg_A Mandelate racemase/muco 97.8 0.00071 2.4E-08 69.5 17.3 137 258-437 148-290 (401)
145 3ozy_A Putative mandelate race 97.8 0.00096 3.3E-08 68.4 18.3 147 241-437 140-290 (389)
146 1vcv_A Probable deoxyribose-ph 97.8 0.00067 2.3E-08 64.6 15.6 132 266-425 76-222 (226)
147 2qgy_A Enolase from the enviro 97.8 0.00051 1.8E-08 70.3 16.0 135 258-437 152-288 (391)
148 1tqx_A D-ribulose-5-phosphate 97.7 0.0011 3.7E-08 63.2 16.3 208 138-445 10-221 (227)
149 1pii_A N-(5'phosphoribosyl)ant 97.7 0.00038 1.3E-08 72.8 14.1 140 269-457 130-269 (452)
150 1vc4_A Indole-3-glycerol phosp 97.7 0.00028 9.7E-09 68.3 12.3 119 269-437 128-249 (254)
151 1nu5_A Chloromuconate cycloiso 97.7 0.001 3.4E-08 67.4 16.9 135 258-437 145-282 (370)
152 1xi3_A Thiamine phosphate pyro 97.7 0.00018 6.2E-09 66.7 10.5 77 336-432 122-198 (215)
153 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 0.00075 2.6E-08 64.8 15.1 90 330-441 152-241 (243)
154 3ajx_A 3-hexulose-6-phosphate 97.7 0.00096 3.3E-08 61.7 15.2 127 258-432 68-194 (207)
155 2czd_A Orotidine 5'-phosphate 97.7 0.00092 3.1E-08 62.4 15.0 133 256-444 67-204 (208)
156 2p8b_A Mandelate racemase/muco 97.6 0.00098 3.3E-08 67.5 16.0 143 258-450 144-289 (369)
157 3rcy_A Mandelate racemase/muco 97.6 0.00075 2.6E-08 70.2 15.2 135 258-427 149-288 (433)
158 2qde_A Mandelate racemase/muco 97.6 0.00082 2.8E-08 68.9 15.3 125 258-427 148-274 (397)
159 3o63_A Probable thiamine-phosp 97.6 0.00017 6E-09 69.4 9.4 94 335-447 148-241 (243)
160 4dwd_A Mandelate racemase/muco 97.6 0.0034 1.2E-07 64.4 19.7 145 241-426 127-274 (393)
161 3jr2_A Hexulose-6-phosphate sy 97.6 0.00014 4.8E-09 68.5 8.6 124 258-427 74-198 (218)
162 2qr6_A IMP dehydrogenase/GMP r 97.6 0.00033 1.1E-08 71.8 11.8 101 290-424 140-240 (393)
163 3stp_A Galactonate dehydratase 97.6 0.00064 2.2E-08 70.3 14.0 145 241-427 169-315 (412)
164 2gl5_A Putative dehydratase pr 97.6 0.00084 2.9E-08 69.0 14.7 135 257-426 152-302 (410)
165 2pp0_A L-talarate/galactarate 97.6 0.00094 3.2E-08 68.6 14.9 125 258-426 178-304 (398)
166 2o56_A Putative mandelate race 97.6 0.00093 3.2E-08 68.6 14.7 133 258-426 155-299 (407)
167 3rr1_A GALD, putative D-galact 97.6 0.00085 2.9E-08 69.2 14.3 145 241-426 116-262 (405)
168 1tzz_A Hypothetical protein L1 97.5 0.0011 3.8E-08 67.8 14.9 146 257-451 167-318 (392)
169 1i4n_A Indole-3-glycerol phosp 97.5 0.0009 3.1E-08 64.7 13.3 123 269-441 123-246 (251)
170 1tkk_A Similar to chloromucona 97.5 0.0038 1.3E-07 63.0 18.5 135 258-437 143-281 (366)
171 1q6o_A Humps, 3-keto-L-gulonat 97.5 0.00093 3.2E-08 62.7 12.8 141 258-445 71-211 (216)
172 1p1x_A Deoxyribose-phosphate a 97.5 0.00063 2.2E-08 66.1 11.7 115 268-418 97-222 (260)
173 2f6u_A GGGPS, (S)-3-O-geranylg 97.5 0.00019 6.5E-09 68.8 7.9 49 378-428 175-223 (234)
174 2gdq_A YITF; mandelate racemas 97.5 0.00086 2.9E-08 68.4 13.4 126 257-426 141-269 (382)
175 4e38_A Keto-hydroxyglutarate-a 97.5 0.0035 1.2E-07 59.8 16.6 110 258-427 97-206 (232)
176 2qdd_A Mandelate racemase/muco 97.5 0.0016 5.4E-08 66.3 15.1 144 241-438 136-281 (378)
177 2ox4_A Putative mandelate race 97.5 0.0012 4.2E-08 67.6 14.3 133 258-426 149-293 (403)
178 2oz8_A MLL7089 protein; struct 97.5 0.0039 1.3E-07 63.7 18.0 122 258-423 148-273 (389)
179 2qq6_A Mandelate racemase/muco 97.5 0.0021 7.3E-08 66.1 16.0 135 257-426 151-294 (410)
180 3bjs_A Mandelate racemase/muco 97.5 0.0009 3.1E-08 69.5 13.2 125 257-426 187-314 (428)
181 4a29_A Engineered retro-aldol 97.5 0.0028 9.6E-08 61.2 15.4 124 270-441 127-250 (258)
182 2poz_A Putative dehydratase; o 97.4 0.0012 4.1E-08 67.5 13.1 134 258-426 140-283 (392)
183 3r4e_A Mandelate racemase/muco 97.4 0.001 3.5E-08 68.8 12.7 147 241-427 134-305 (418)
184 3zen_D Fatty acid synthase; tr 97.4 0.00028 9.5E-09 88.4 9.5 43 385-429 599-652 (3089)
185 2zad_A Muconate cycloisomerase 97.4 0.0057 1.9E-07 61.3 17.7 119 258-422 142-264 (345)
186 2ps2_A Putative mandelate race 97.4 0.0033 1.1E-07 63.7 16.0 143 241-437 137-282 (371)
187 3sjn_A Mandelate racemase/muco 97.4 0.0012 4.1E-08 67.3 12.6 127 258-426 149-278 (374)
188 4e5t_A Mandelate racemase / mu 97.4 0.0022 7.7E-08 65.9 14.3 144 258-437 154-302 (404)
189 4gj1_A 1-(5-phosphoribosyl)-5- 97.3 0.00038 1.3E-08 66.9 7.7 90 330-441 32-121 (243)
190 4e4u_A Mandalate racemase/muco 97.3 0.0033 1.1E-07 65.0 15.3 144 258-437 147-295 (412)
191 3eez_A Putative mandelate race 97.3 0.0016 5.6E-08 66.3 12.8 144 241-438 136-281 (378)
192 2hxt_A L-fuconate dehydratase; 97.3 0.0025 8.4E-08 66.3 13.4 125 258-426 201-327 (441)
193 1sjd_A N-acylamino acid racema 97.3 0.0032 1.1E-07 63.7 13.9 133 242-426 132-266 (368)
194 3cu2_A Ribulose-5-phosphate 3- 97.2 0.0024 8.3E-08 61.2 11.8 201 137-428 17-222 (237)
195 3w01_A Heptaprenylglyceryl pho 97.2 0.00019 6.5E-09 68.7 3.9 59 380-441 173-231 (235)
196 3m47_A Orotidine 5'-phosphate 97.2 0.0032 1.1E-07 59.8 12.4 193 136-433 12-211 (228)
197 3kts_A Glycerol uptake operon 97.2 0.00032 1.1E-08 65.2 4.9 48 382-431 140-187 (192)
198 3i4k_A Muconate lactonizing en 97.1 0.0093 3.2E-07 60.8 16.2 146 242-437 140-288 (383)
199 3sbf_A Mandelate racemase / mu 97.1 0.015 5.2E-07 59.6 17.8 156 241-438 124-296 (401)
200 4eiv_A Deoxyribose-phosphate a 97.1 0.006 2E-07 59.9 13.6 91 292-414 135-252 (297)
201 4dbe_A Orotidine 5'-phosphate 97.1 0.0057 1.9E-07 58.0 13.2 135 265-447 75-213 (222)
202 3v3w_A Starvation sensing prot 97.1 0.0079 2.7E-07 62.3 15.3 147 241-427 140-311 (424)
203 3jva_A Dipeptide epimerase; en 97.1 0.012 4.2E-07 59.3 16.4 137 252-437 139-277 (354)
204 3nvt_A 3-deoxy-D-arabino-heptu 97.1 0.12 4E-06 52.9 23.7 233 96-424 89-347 (385)
205 3ddm_A Putative mandelate race 97.1 0.0041 1.4E-07 63.8 12.9 124 258-426 158-284 (392)
206 3ro6_B Putative chloromuconate 97.1 0.0089 3E-07 60.3 15.2 146 241-437 131-279 (356)
207 3lab_A Putative KDPG (2-keto-3 97.1 0.0078 2.7E-07 56.8 13.7 80 315-422 12-91 (217)
208 3mqt_A Mandelate racemase/muco 97.1 0.015 5.1E-07 59.5 16.9 139 256-437 153-295 (394)
209 3q45_A Mandelate racemase/muco 97.1 0.014 4.7E-07 59.2 16.4 153 243-450 133-287 (368)
210 2a4a_A Deoxyribose-phosphate a 97.1 0.0013 4.6E-08 64.4 8.5 79 318-418 157-249 (281)
211 3vcn_A Mannonate dehydratase; 97.0 0.0042 1.4E-07 64.4 12.5 138 252-427 150-312 (425)
212 2p10_A MLL9387 protein; putati 97.0 0.023 8E-07 55.4 16.6 170 241-449 96-282 (286)
213 3tji_A Mandelate racemase/muco 97.0 0.017 5.9E-07 59.7 16.7 155 241-437 145-316 (422)
214 2yyu_A Orotidine 5'-phosphate 97.0 0.019 6.4E-07 55.0 15.7 193 135-432 3-223 (246)
215 3ru6_A Orotidine 5'-phosphate 97.0 0.017 5.8E-07 57.2 15.4 84 332-449 161-254 (303)
216 3toy_A Mandelate racemase/muco 97.0 0.03 1E-06 57.1 17.9 137 241-426 158-297 (383)
217 2h6r_A Triosephosphate isomera 96.9 0.0061 2.1E-07 57.5 11.4 57 382-441 159-215 (219)
218 3mkc_A Racemase; metabolic pro 96.9 0.014 4.7E-07 59.9 14.6 129 256-426 158-290 (394)
219 1eix_A Orotidine 5'-monophosph 96.9 0.0081 2.8E-07 57.5 12.1 47 384-432 173-229 (245)
220 3ugv_A Enolase; enzyme functio 96.9 0.023 7.7E-07 58.2 16.1 126 258-427 174-304 (390)
221 3dg3_A Muconate cycloisomerase 96.9 0.058 2E-06 54.5 18.9 146 241-437 130-278 (367)
222 1vr6_A Phospho-2-dehydro-3-deo 96.8 0.086 2.9E-06 53.2 19.8 95 314-425 212-312 (350)
223 3go2_A Putative L-alanine-DL-g 96.8 0.018 6.3E-07 59.2 14.9 132 258-426 146-295 (409)
224 1dbt_A Orotidine 5'-phosphate 96.8 0.031 1.1E-06 53.2 15.4 59 384-445 166-234 (239)
225 1vli_A Spore coat polysacchari 96.8 0.057 2E-06 55.1 18.0 218 127-424 15-249 (385)
226 3tj4_A Mandelate racemase; eno 96.7 0.019 6.4E-07 58.3 14.3 125 258-426 154-281 (372)
227 3tcs_A Racemase, putative; PSI 96.7 0.09 3.1E-06 53.7 19.2 131 268-437 161-293 (388)
228 1vs1_A 3-deoxy-7-phosphoheptul 96.7 0.26 8.8E-06 48.1 21.6 94 315-426 145-245 (276)
229 1chr_A Chloromuconate cycloiso 96.7 0.021 7.2E-07 57.8 14.4 126 258-427 146-273 (370)
230 3p3b_A Mandelate racemase/muco 96.7 0.0047 1.6E-07 63.2 9.1 132 257-426 150-288 (392)
231 3exr_A RMPD (hexulose-6-phosph 96.6 0.014 4.6E-07 55.2 11.4 123 269-432 82-204 (221)
232 3t6c_A RSPA, putative MAND fam 96.6 0.074 2.5E-06 55.3 18.0 109 293-437 225-334 (440)
233 1vhc_A Putative KHG/KDPG aldol 96.6 0.0086 2.9E-07 56.8 9.9 123 258-439 30-153 (224)
234 3ceu_A Thiamine phosphate pyro 96.6 0.0024 8.1E-08 59.7 5.6 63 380-443 130-193 (210)
235 1wbh_A KHG/KDPG aldolase; lyas 96.6 0.013 4.5E-07 55.1 10.7 123 258-439 29-152 (214)
236 3ve9_A Orotidine-5'-phosphate 96.5 0.0071 2.4E-07 57.0 8.8 87 328-445 114-204 (215)
237 1vhc_A Putative KHG/KDPG aldol 96.5 0.018 6.3E-07 54.5 11.6 65 336-427 124-189 (224)
238 3dip_A Enolase; structural gen 96.5 0.016 5.6E-07 59.6 12.2 100 293-427 198-299 (410)
239 1qap_A Quinolinic acid phospho 96.5 0.014 4.8E-07 57.7 11.1 63 335-426 221-283 (296)
240 4e38_A Keto-hydroxyglutarate-a 96.5 0.035 1.2E-06 52.9 13.4 69 327-422 44-112 (232)
241 3lab_A Putative KDPG (2-keto-3 96.5 0.065 2.2E-06 50.5 15.0 126 252-439 23-155 (217)
242 3gd6_A Muconate cycloisomerase 96.5 0.047 1.6E-06 55.7 15.3 132 258-437 145-281 (391)
243 3iv3_A Tagatose 1,6-diphosphat 96.5 0.039 1.3E-06 55.3 14.2 170 263-457 119-315 (332)
244 2agk_A 1-(5-phosphoribosyl)-5- 96.5 0.0023 7.9E-08 62.0 5.1 82 330-441 39-125 (260)
245 2wqp_A Polysialic acid capsule 96.5 0.12 4.3E-06 52.0 17.8 239 128-449 7-272 (349)
246 3mwc_A Mandelate racemase/muco 96.5 0.039 1.3E-06 56.6 14.4 145 241-437 151-298 (400)
247 3r0u_A Enzyme of enolase super 96.4 0.074 2.5E-06 54.1 16.0 137 241-427 133-273 (379)
248 1to3_A Putative aldolase YIHT; 96.4 0.036 1.2E-06 54.9 13.2 121 269-428 121-259 (304)
249 3cpr_A Dihydrodipicolinate syn 96.3 0.029 9.8E-07 55.5 12.2 89 326-432 34-126 (304)
250 1r0m_A N-acylamino acid racema 96.3 0.023 8E-07 57.5 11.8 120 258-426 151-272 (375)
251 3my9_A Muconate cycloisomerase 96.3 0.081 2.8E-06 53.6 15.8 145 242-436 138-284 (377)
252 4e4f_A Mannonate dehydratase; 96.3 0.0082 2.8E-07 62.2 8.4 98 294-426 214-312 (426)
253 2zc8_A N-acylamino acid racema 96.3 0.029 1E-06 56.5 12.2 140 258-451 144-285 (369)
254 1f6k_A N-acetylneuraminate lya 96.3 0.024 8.3E-07 55.7 11.2 89 326-432 21-114 (293)
255 4dxk_A Mandelate racemase / mu 96.2 0.016 5.5E-07 59.5 9.9 124 268-426 166-294 (400)
256 3l21_A DHDPS, dihydrodipicolin 96.2 0.032 1.1E-06 55.1 11.7 89 326-432 33-125 (304)
257 2wkj_A N-acetylneuraminate lya 96.2 0.032 1.1E-06 55.1 11.6 89 326-432 29-121 (303)
258 3igs_A N-acetylmannosamine-6-p 96.2 0.036 1.2E-06 52.7 11.4 83 328-443 35-127 (232)
259 3b4u_A Dihydrodipicolinate syn 96.1 0.037 1.3E-06 54.4 11.8 86 326-428 21-110 (294)
260 1xky_A Dihydrodipicolinate syn 96.1 0.037 1.3E-06 54.6 11.7 89 326-432 30-122 (301)
261 1xg4_A Probable methylisocitra 96.1 0.29 9.8E-06 48.2 17.9 149 241-428 80-240 (295)
262 1zco_A 2-dehydro-3-deoxyphosph 96.1 0.29 9.8E-06 47.3 17.6 95 314-425 129-229 (262)
263 3tak_A DHDPS, dihydrodipicolin 96.1 0.038 1.3E-06 54.2 11.4 89 326-432 19-111 (291)
264 3i6e_A Muconate cycloisomerase 96.0 0.16 5.4E-06 51.7 16.3 140 241-431 139-280 (385)
265 3qze_A DHDPS, dihydrodipicolin 96.0 0.032 1.1E-06 55.4 10.9 89 326-432 41-133 (314)
266 2ojp_A DHDPS, dihydrodipicolin 96.0 0.04 1.4E-06 54.0 11.4 89 326-432 19-111 (292)
267 3daq_A DHDPS, dihydrodipicolin 96.0 0.034 1.2E-06 54.6 10.8 89 326-432 20-112 (292)
268 3qfe_A Putative dihydrodipicol 96.0 0.031 1.1E-06 55.6 10.6 89 326-431 29-121 (318)
269 3khj_A Inosine-5-monophosphate 96.0 0.044 1.5E-06 55.5 11.9 79 315-423 95-173 (361)
270 3si9_A DHDPS, dihydrodipicolin 96.0 0.033 1.1E-06 55.4 10.6 89 326-432 40-132 (315)
271 2v9d_A YAGE; dihydrodipicolini 96.0 0.039 1.3E-06 55.6 11.1 89 326-432 49-141 (343)
272 2r8w_A AGR_C_1641P; APC7498, d 96.0 0.041 1.4E-06 55.1 11.2 88 326-432 52-144 (332)
273 3tfx_A Orotidine 5'-phosphate 95.9 0.34 1.1E-05 46.8 17.2 79 331-442 146-237 (259)
274 1mxs_A KDPG aldolase; 2-keto-3 95.9 0.022 7.4E-07 54.0 8.7 123 258-439 39-162 (225)
275 3flu_A DHDPS, dihydrodipicolin 95.9 0.064 2.2E-06 52.7 12.4 89 326-432 25-117 (297)
276 3tsm_A IGPS, indole-3-glycerol 95.9 0.074 2.5E-06 51.8 12.4 74 330-427 80-153 (272)
277 1o5k_A DHDPS, dihydrodipicolin 95.8 0.048 1.6E-06 53.9 11.1 92 323-432 27-122 (306)
278 3d0c_A Dihydrodipicolinate syn 95.8 0.027 9.2E-07 56.0 9.1 87 326-432 30-121 (314)
279 2rfg_A Dihydrodipicolinate syn 95.8 0.037 1.3E-06 54.5 9.9 89 326-432 18-110 (297)
280 3fs2_A 2-dehydro-3-deoxyphosph 95.8 0.65 2.2E-05 45.7 18.7 118 263-422 125-259 (298)
281 2b7n_A Probable nicotinate-nuc 95.7 0.021 7.2E-07 55.7 7.8 33 394-427 229-261 (273)
282 3e96_A Dihydrodipicolinate syn 95.7 0.029 1E-06 55.7 8.8 88 326-432 30-121 (316)
283 3dgb_A Muconate cycloisomerase 95.6 0.18 6.2E-06 51.2 14.8 128 259-431 153-282 (382)
284 2yxg_A DHDPS, dihydrodipicolin 95.6 0.087 3E-06 51.6 11.9 92 323-432 15-110 (289)
285 3fv9_G Mandelate racemase/muco 95.6 0.2 6.7E-06 51.0 15.0 148 241-437 136-286 (386)
286 3na8_A Putative dihydrodipicol 95.6 0.057 2E-06 53.6 10.7 89 326-432 42-134 (315)
287 3fkr_A L-2-keto-3-deoxyarabona 95.6 0.056 1.9E-06 53.5 10.6 85 326-427 26-114 (309)
288 4hnl_A Mandelate racemase/muco 95.6 0.26 8.9E-06 50.6 16.0 149 241-426 144-305 (421)
289 1vc4_A Indole-3-glycerol phosp 95.6 0.13 4.3E-06 49.5 12.7 84 329-439 65-148 (254)
290 1y0e_A Putative N-acetylmannos 95.6 0.64 2.2E-05 42.9 17.3 120 254-424 23-147 (223)
291 3r2g_A Inosine 5'-monophosphat 95.6 0.029 9.8E-07 56.9 8.4 71 329-423 99-169 (361)
292 3a5f_A Dihydrodipicolinate syn 95.6 0.04 1.4E-06 54.0 9.3 89 326-432 19-111 (291)
293 2jbm_A Nicotinate-nucleotide p 95.6 0.023 7.9E-07 56.1 7.5 32 394-426 244-275 (299)
294 2ehh_A DHDPS, dihydrodipicolin 95.6 0.088 3E-06 51.6 11.6 91 324-432 16-110 (294)
295 3h5d_A DHDPS, dihydrodipicolin 95.5 0.076 2.6E-06 52.6 11.2 89 326-432 25-118 (311)
296 3dz1_A Dihydrodipicolinate syn 95.5 0.079 2.7E-06 52.5 11.3 85 326-429 26-114 (313)
297 3s5o_A 4-hydroxy-2-oxoglutarat 95.5 0.064 2.2E-06 53.0 10.5 87 326-429 32-122 (307)
298 3m5v_A DHDPS, dihydrodipicolin 95.5 0.084 2.9E-06 52.0 11.3 89 326-432 25-118 (301)
299 4dpp_A DHDPS 2, dihydrodipicol 95.5 0.054 1.8E-06 54.9 9.9 89 326-432 77-169 (360)
300 3fcp_A L-Ala-D/L-Glu epimerase 95.5 0.77 2.6E-05 46.5 18.6 136 259-439 152-289 (381)
301 3qja_A IGPS, indole-3-glycerol 95.4 0.11 3.8E-06 50.5 11.7 74 330-427 73-146 (272)
302 1x1o_A Nicotinate-nucleotide p 95.4 0.12 4.2E-06 50.6 12.1 76 315-426 196-271 (286)
303 3q58_A N-acetylmannosamine-6-p 95.4 0.11 3.8E-06 49.1 11.2 83 328-443 35-127 (229)
304 3sz8_A 2-dehydro-3-deoxyphosph 95.3 0.35 1.2E-05 47.3 14.8 140 265-444 106-272 (285)
305 4fo4_A Inosine 5'-monophosphat 95.3 0.069 2.3E-06 54.2 10.1 70 330-423 108-177 (366)
306 3ldv_A Orotidine 5'-phosphate 95.3 0.5 1.7E-05 45.5 15.7 70 330-432 163-242 (255)
307 1nvm_A HOA, 4-hydroxy-2-oxoval 95.3 1.3 4.6E-05 44.1 19.5 125 258-424 97-227 (345)
308 3iwp_A Copper homeostasis prot 95.2 0.3 1E-05 47.8 13.8 131 252-423 106-238 (287)
309 3c2e_A Nicotinate-nucleotide p 95.2 0.019 6.6E-07 56.6 5.4 32 394-426 249-280 (294)
310 1ypf_A GMP reductase; GUAC, pu 95.1 0.14 4.8E-06 51.1 11.5 82 315-423 94-177 (336)
311 2vc6_A MOSA, dihydrodipicolina 95.0 0.084 2.9E-06 51.7 9.5 88 326-432 18-110 (292)
312 1vkf_A Glycerol uptake operon 95.0 0.014 4.7E-07 53.9 3.5 41 382-428 142-182 (188)
313 3ih1_A Methylisocitrate lyase; 94.8 0.22 7.7E-06 49.2 12.0 125 294-441 74-210 (305)
314 4a35_A Mitochondrial enolase s 94.8 0.61 2.1E-05 48.3 15.8 127 252-426 201-332 (441)
315 3paj_A Nicotinate-nucleotide p 94.8 0.19 6.5E-06 50.0 11.3 75 316-426 232-306 (320)
316 1o60_A 2-dehydro-3-deoxyphosph 94.7 0.33 1.1E-05 47.7 12.7 137 268-444 107-270 (292)
317 3f4w_A Putative hexulose 6 pho 94.6 0.43 1.5E-05 43.7 12.9 117 258-425 14-136 (211)
318 1zfj_A Inosine monophosphate d 94.6 0.2 6.8E-06 52.4 11.7 81 316-423 222-302 (491)
319 3eb2_A Putative dihydrodipicol 94.6 0.058 2E-06 53.1 7.1 89 326-432 22-114 (300)
320 1gox_A (S)-2-hydroxy-acid oxid 94.5 0.28 9.4E-06 49.7 12.1 106 316-424 123-254 (370)
321 3tml_A 2-dehydro-3-deoxyphosph 94.5 0.69 2.4E-05 45.3 14.4 110 314-443 130-272 (288)
322 3tqv_A Nicotinate-nucleotide p 94.5 0.17 5.8E-06 49.6 10.0 76 315-426 198-273 (287)
323 1wa3_A 2-keto-3-deoxy-6-phosph 94.5 0.19 6.5E-06 46.0 9.9 83 316-426 10-92 (205)
324 2hmc_A AGR_L_411P, dihydrodipi 94.3 0.18 6E-06 50.8 10.1 87 326-432 44-134 (344)
325 1qwg_A PSL synthase;, (2R)-pho 94.3 0.41 1.4E-05 45.9 12.1 129 250-424 22-169 (251)
326 3eoo_A Methylisocitrate lyase; 94.3 0.65 2.2E-05 45.7 13.9 155 261-441 36-206 (298)
327 3nl6_A Thiamine biosynthetic b 94.3 0.19 6.4E-06 53.6 10.6 66 381-449 156-233 (540)
328 3gnn_A Nicotinate-nucleotide p 94.2 0.18 6.1E-06 49.7 9.5 63 335-426 222-284 (298)
329 1eep_A Inosine 5'-monophosphat 94.2 0.16 5.4E-06 52.0 9.5 79 317-422 143-221 (404)
330 4e8g_A Enolase, mandelate race 94.1 0.85 2.9E-05 46.4 14.9 139 241-432 155-296 (391)
331 2r91_A 2-keto-3-deoxy-(6-phosp 94.1 0.27 9.1E-06 48.0 10.7 86 323-428 13-102 (286)
332 4hpn_A Putative uncharacterize 94.1 1.1 3.6E-05 45.2 15.5 129 253-426 142-272 (378)
333 3sgz_A Hydroxyacid oxidase 2; 94.1 0.17 5.9E-06 51.0 9.4 105 315-422 121-244 (352)
334 1o4u_A Type II quinolic acid p 94.0 0.071 2.4E-06 52.3 6.3 93 297-426 179-271 (285)
335 4af0_A Inosine-5'-monophosphat 94.0 0.14 4.8E-06 54.3 8.7 71 330-424 281-351 (556)
336 2v82_A 2-dehydro-3-deoxy-6-pho 93.9 0.44 1.5E-05 43.7 11.3 83 315-424 6-88 (212)
337 1w0m_A TIM, triosephosphate is 93.9 0.22 7.5E-06 47.2 9.2 59 385-446 165-223 (226)
338 3l0g_A Nicotinate-nucleotide p 93.8 0.27 9.2E-06 48.4 9.9 76 315-426 207-282 (300)
339 4avf_A Inosine-5'-monophosphat 93.8 0.12 4E-06 54.5 7.8 70 330-423 229-298 (490)
340 3g8r_A Probable spore coat pol 93.7 0.78 2.7E-05 46.1 13.4 138 266-449 107-260 (350)
341 1hg3_A Triosephosphate isomera 93.7 0.26 8.9E-06 46.6 9.4 58 382-442 165-222 (225)
342 2nuw_A 2-keto-3-deoxygluconate 93.6 0.26 8.7E-06 48.2 9.5 83 326-428 17-103 (288)
343 3jr2_A Hexulose-6-phosphate sy 93.5 1.4 4.8E-05 40.8 14.0 133 241-425 8-141 (218)
344 2nli_A Lactate oxidase; flavoe 93.5 0.62 2.1E-05 47.1 12.3 117 315-434 132-271 (368)
345 1xky_A Dihydrodipicolinate syn 93.4 1.3 4.5E-05 43.3 14.4 86 258-355 34-120 (301)
346 1xg4_A Probable methylisocitra 93.4 1.2 4E-05 43.8 13.9 159 261-442 31-203 (295)
347 3ajx_A 3-hexulose-6-phosphate 93.4 2.2 7.5E-05 38.7 15.0 120 258-426 14-137 (207)
348 2qkf_A 3-deoxy-D-manno-octulos 93.4 0.96 3.3E-05 44.1 13.1 113 314-444 128-267 (280)
349 3ik4_A Mandelate racemase/muco 93.4 2.3 7.7E-05 42.7 16.3 139 242-432 135-277 (365)
350 4fxs_A Inosine-5'-monophosphat 93.3 0.12 4E-06 54.6 6.9 82 317-423 219-300 (496)
351 1qpo_A Quinolinate acid phosph 93.3 0.24 8.1E-06 48.5 8.6 77 317-426 196-272 (284)
352 1yxy_A Putative N-acetylmannos 93.2 0.47 1.6E-05 44.2 10.4 96 315-443 17-129 (234)
353 3flu_A DHDPS, dihydrodipicolin 93.1 1.6 5.3E-05 42.7 14.3 86 258-355 29-115 (297)
354 2ekc_A AQ_1548, tryptophan syn 93.1 1.3 4.6E-05 42.3 13.6 111 324-451 26-149 (262)
355 3tak_A DHDPS, dihydrodipicolin 93.1 1.6 5.4E-05 42.5 14.2 86 258-355 23-109 (291)
356 3qze_A DHDPS, dihydrodipicolin 93.0 1.4 4.8E-05 43.4 13.9 86 258-355 45-131 (314)
357 2ehh_A DHDPS, dihydrodipicolin 93.0 1.3 4.6E-05 43.1 13.5 86 258-355 22-108 (294)
358 3l21_A DHDPS, dihydrodipicolin 93.0 1.3 4.5E-05 43.5 13.5 86 258-355 37-123 (304)
359 2yxg_A DHDPS, dihydrodipicolin 93.0 1.2 4E-05 43.4 13.1 86 258-355 22-108 (289)
360 1vrd_A Inosine-5'-monophosphat 92.9 0.18 6.3E-06 52.8 7.7 70 330-423 237-306 (494)
361 1w3i_A EDA, 2-keto-3-deoxy glu 92.9 0.7 2.4E-05 45.1 11.4 83 326-428 17-103 (293)
362 1jcn_A Inosine monophosphate d 92.9 0.18 6.2E-06 53.1 7.7 70 330-423 255-324 (514)
363 2r8w_A AGR_C_1641P; APC7498, d 92.9 1.5 5.1E-05 43.6 14.0 86 258-355 56-142 (332)
364 1twd_A Copper homeostasis prot 92.9 2.7 9.1E-05 40.4 15.0 131 251-423 67-198 (256)
365 3cpr_A Dihydrodipicolinate syn 92.8 1.6 5.5E-05 42.8 13.9 86 258-355 38-124 (304)
366 3tr2_A Orotidine 5'-phosphate 92.8 0.28 9.5E-06 46.8 8.0 70 330-432 145-224 (239)
367 3usb_A Inosine-5'-monophosphat 92.7 0.35 1.2E-05 51.1 9.6 81 315-422 244-324 (511)
368 2vc6_A MOSA, dihydrodipicolina 92.7 2.5 8.6E-05 41.1 15.1 85 258-354 22-107 (292)
369 4dye_A Isomerase; enolase fami 92.7 2.5 8.6E-05 43.0 15.7 132 257-437 170-304 (398)
370 1vqt_A Orotidine 5'-phosphate 92.7 0.71 2.4E-05 43.1 10.6 66 329-432 126-200 (213)
371 3d0c_A Dihydrodipicolinate syn 92.6 0.85 2.9E-05 45.0 11.7 85 258-355 34-119 (314)
372 2v9d_A YAGE; dihydrodipicolini 92.6 1.5 5.2E-05 43.8 13.6 86 258-355 53-139 (343)
373 4h1z_A Enolase Q92ZS5; dehydra 92.6 4.3 0.00015 41.4 17.3 121 258-423 191-313 (412)
374 3e96_A Dihydrodipicolinate syn 92.6 0.76 2.6E-05 45.4 11.2 83 258-353 34-117 (316)
375 2ze3_A DFA0005; organic waste 92.5 8.1 0.00028 37.4 18.8 168 241-454 78-259 (275)
376 3daq_A DHDPS, dihydrodipicolin 92.4 1.2 4.2E-05 43.4 12.4 86 258-355 24-110 (292)
377 1o5k_A DHDPS, dihydrodipicolin 92.4 1.3 4.3E-05 43.6 12.6 86 258-355 34-120 (306)
378 2wkj_A N-acetylneuraminate lya 92.4 1.7 6E-05 42.5 13.5 86 258-355 33-119 (303)
379 3ffs_A Inosine-5-monophosphate 92.4 0.24 8.2E-06 50.8 7.4 67 332-423 146-212 (400)
380 1u83_A Phosphosulfolactate syn 92.3 1.4 4.9E-05 42.7 12.4 126 250-424 49-193 (276)
381 2chr_A Chloromuconate cycloiso 92.3 3.9 0.00013 40.8 16.3 135 258-437 146-282 (370)
382 4h83_A Mandelate racemase/muco 92.3 2.5 8.4E-05 42.8 14.9 114 269-426 179-294 (388)
383 2p10_A MLL9387 protein; putati 92.3 2.3 8E-05 41.4 13.9 99 314-426 93-193 (286)
384 3si9_A DHDPS, dihydrodipicolin 92.3 1.7 6E-05 42.8 13.4 87 257-355 43-130 (315)
385 1p0k_A Isopentenyl-diphosphate 92.3 1.8 6.2E-05 43.0 13.7 93 314-423 115-209 (349)
386 2bdq_A Copper homeostasis prot 92.3 2.7 9.2E-05 39.6 13.9 135 251-423 70-207 (224)
387 2ojp_A DHDPS, dihydrodipicolin 92.2 1.6 5.4E-05 42.5 12.9 86 258-355 23-109 (292)
388 3na8_A Putative dihydrodipicol 92.2 1.4 4.8E-05 43.5 12.6 86 258-355 46-132 (315)
389 1wbh_A KHG/KDPG aldolase; lyas 92.2 0.74 2.5E-05 42.9 10.0 80 316-423 16-95 (214)
390 1vyr_A Pentaerythritol tetrani 92.2 1.4 4.6E-05 44.5 12.7 93 331-426 163-274 (364)
391 3m5v_A DHDPS, dihydrodipicolin 92.1 1.6 5.5E-05 42.7 12.8 86 258-355 29-116 (301)
392 1mxs_A KDPG aldolase; 2-keto-3 92.0 1.7 5.8E-05 40.8 12.4 79 317-423 27-105 (225)
393 2rfg_A Dihydrodipicolinate syn 91.9 1.2 4E-05 43.7 11.6 86 258-355 22-108 (297)
394 2nx9_A Oxaloacetate decarboxyl 91.9 13 0.00046 38.5 21.2 128 254-425 100-235 (464)
395 1f6k_A N-acetylneuraminate lya 91.8 1.5 5E-05 42.8 12.2 86 258-355 25-112 (293)
396 3eoo_A Methylisocitrate lyase; 91.7 11 0.00036 37.0 19.0 149 241-428 85-244 (298)
397 3ih1_A Methylisocitrate lyase; 91.5 6.3 0.00022 38.7 16.2 147 241-428 91-248 (305)
398 4adt_A Pyridoxine biosynthetic 91.4 0.56 1.9E-05 46.2 8.6 73 332-420 31-104 (297)
399 2c6q_A GMP reductase 2; TIM ba 91.4 0.38 1.3E-05 48.4 7.6 80 317-423 108-189 (351)
400 3apt_A Methylenetetrahydrofola 91.3 7.6 0.00026 38.1 16.7 168 242-441 15-195 (310)
401 3gr7_A NADPH dehydrogenase; fl 91.2 1.5 5.1E-05 43.7 11.7 96 326-425 134-251 (340)
402 2nzl_A Hydroxyacid oxidase 1; 91.2 1 3.5E-05 45.9 10.6 117 315-434 146-294 (392)
403 1s2w_A Phosphoenolpyruvate pho 91.1 3.8 0.00013 40.1 14.2 162 261-442 33-207 (295)
404 2yw3_A 4-hydroxy-2-oxoglutarat 91.1 0.43 1.5E-05 44.3 7.0 120 258-438 26-146 (207)
405 2hjp_A Phosphonopyruvate hydro 91.1 2 6.8E-05 42.0 12.1 161 260-442 28-203 (290)
406 2gou_A Oxidoreductase, FMN-bin 90.9 2 6.9E-05 43.2 12.4 93 331-426 163-273 (365)
407 1ps9_A 2,4-dienoyl-COA reducta 90.8 2.1 7E-05 46.4 13.2 92 331-425 143-250 (671)
408 3a5f_A Dihydrodipicolinate syn 90.7 1.3 4.3E-05 43.2 10.3 86 258-355 23-109 (291)
409 3fkr_A L-2-keto-3-deoxyarabona 90.6 2.9 9.9E-05 41.1 13.0 83 258-352 30-113 (309)
410 3vnd_A TSA, tryptophan synthas 90.6 1.3 4.4E-05 42.9 10.1 119 315-451 17-150 (267)
411 3bw2_A 2-nitropropane dioxygen 90.5 5.4 0.00018 39.9 15.2 126 251-422 45-171 (369)
412 2gjl_A Hypothetical protein PA 90.5 2.1 7.2E-05 42.1 11.9 91 291-422 52-144 (328)
413 3kru_A NADH:flavin oxidoreduct 90.4 3.3 0.00011 41.3 13.4 96 326-425 133-251 (343)
414 2nwr_A 2-dehydro-3-deoxyphosph 90.3 1.3 4.5E-05 42.9 9.9 135 267-444 92-253 (267)
415 1zlp_A PSR132, petal death pro 90.3 3.6 0.00012 40.8 13.3 159 261-441 53-224 (318)
416 3bo9_A Putative nitroalkan dio 90.2 1.7 5.8E-05 43.0 10.9 91 290-423 61-151 (326)
417 1rqb_A Transcarboxylase 5S sub 90.0 22 0.00074 37.7 21.2 130 254-425 117-254 (539)
418 3eb2_A Putative dihydrodipicol 89.8 1.5 5E-05 43.0 10.0 86 258-355 26-112 (300)
419 2zbt_A Pyridoxal biosynthesis 89.7 0.68 2.3E-05 45.0 7.5 84 315-420 21-104 (297)
420 3fk4_A Rubisco-like protein; s 89.6 8.2 0.00028 39.6 15.7 120 188-349 115-240 (414)
421 3cyj_A Mandelate racemase/muco 89.5 18 0.00062 36.0 19.4 139 241-426 133-273 (372)
422 3ekg_A Mandelate racemase/muco 89.4 1.7 5.9E-05 44.4 10.6 97 295-426 197-296 (404)
423 3fok_A Uncharacterized protein 89.4 6.9 0.00024 38.5 14.3 128 270-445 142-295 (307)
424 1wuf_A Hypothetical protein LI 89.3 2.4 8.1E-05 43.0 11.5 121 258-427 164-286 (393)
425 1kbi_A Cytochrome B2, L-LCR; f 89.3 2.9 9.9E-05 44.1 12.4 105 315-422 246-370 (511)
426 3qfe_A Putative dihydrodipicol 89.2 3.8 0.00013 40.4 12.5 84 257-352 32-116 (318)
427 1p4c_A L(+)-mandelate dehydrog 89.1 5.3 0.00018 40.4 13.8 42 379-423 212-253 (380)
428 2ze3_A DFA0005; organic waste 89.0 3.1 0.00011 40.3 11.5 151 261-441 30-203 (275)
429 2z6i_A Trans-2-enoyl-ACP reduc 89.0 2.9 9.9E-05 41.3 11.6 90 291-423 48-137 (332)
430 3h5d_A DHDPS, dihydrodipicolin 89.0 4 0.00014 40.1 12.5 86 258-355 29-116 (311)
431 3nav_A Tryptophan synthase alp 88.9 1.8 6.1E-05 42.0 9.7 119 315-451 19-152 (271)
432 1zlp_A PSR132, petal death pro 88.7 18 0.00062 35.7 17.0 147 241-428 103-262 (318)
433 1qop_A Tryptophan synthase alp 88.6 0.81 2.8E-05 44.0 7.0 92 323-423 25-129 (268)
434 3b4u_A Dihydrodipicolinate syn 88.5 4.5 0.00015 39.3 12.4 86 258-355 25-111 (294)
435 3s5o_A 4-hydroxy-2-oxoglutarat 88.5 3.6 0.00012 40.3 11.7 84 258-353 36-120 (307)
436 2tps_A Protein (thiamin phosph 88.4 4.6 0.00016 37.0 11.9 100 269-423 44-143 (227)
437 3lye_A Oxaloacetate acetyl hyd 88.3 5.4 0.00018 39.3 12.8 130 294-442 71-214 (307)
438 2fli_A Ribulose-phosphate 3-ep 88.3 1.7 5.9E-05 39.8 8.8 79 326-426 13-94 (220)
439 3gka_A N-ethylmaleimide reduct 88.2 1.7 5.9E-05 43.8 9.4 112 326-441 151-286 (361)
440 1geq_A Tryptophan synthase alp 88.2 1.1 3.7E-05 42.1 7.5 101 316-425 5-117 (248)
441 4dpp_A DHDPS 2, dihydrodipicol 88.1 6.8 0.00023 39.4 13.6 159 258-437 81-270 (360)
442 3dz1_A Dihydrodipicolinate syn 88.0 12 0.00042 36.6 15.3 81 258-351 30-111 (313)
443 3sr7_A Isopentenyl-diphosphate 88.0 1.8 6E-05 43.8 9.3 91 315-423 144-237 (365)
444 4a3u_A NCR, NADH\:flavin oxido 87.9 2.2 7.6E-05 42.8 10.0 113 326-439 142-283 (358)
445 1ydn_A Hydroxymethylglutaryl-C 87.8 6.8 0.00023 37.8 13.2 104 326-451 152-263 (295)
446 3b8i_A PA4872 oxaloacetate dec 87.7 2.6 8.9E-05 41.2 10.0 155 261-440 35-202 (287)
447 1o66_A 3-methyl-2-oxobutanoate 87.6 21 0.00072 34.5 18.7 44 329-402 161-204 (275)
448 3gk0_A PNP synthase, pyridoxin 87.6 21 0.00072 34.4 18.8 148 241-429 33-189 (278)
449 3s5s_A Mandelate racemase/muco 87.4 7.6 0.00026 39.2 13.7 126 258-426 147-274 (389)
450 3fa4_A 2,3-dimethylmalate lyas 86.9 5.2 0.00018 39.3 11.7 128 294-441 64-205 (302)
451 1xi3_A Thiamine phosphate pyro 86.8 6.6 0.00022 35.4 11.8 108 259-424 28-136 (215)
452 2hjp_A Phosphonopyruvate hydro 86.8 24 0.00082 34.3 19.3 213 137-428 15-240 (290)
453 3vkj_A Isopentenyl-diphosphate 86.7 3.4 0.00012 41.7 10.6 92 314-423 118-218 (368)
454 2qiw_A PEP phosphonomutase; st 86.7 2.2 7.5E-05 40.9 8.7 103 294-422 65-187 (255)
455 2p3z_A L-rhamnonate dehydratas 86.5 5.4 0.00019 40.8 12.2 99 295-426 209-307 (415)
456 3k30_A Histamine dehydrogenase 86.5 2.6 8.9E-05 45.8 10.3 91 332-425 159-265 (690)
457 4ab4_A Xenobiotic reductase B; 86.4 2.4 8.3E-05 42.7 9.3 112 326-441 143-278 (362)
458 3fst_A 5,10-methylenetetrahydr 86.2 27 0.00091 34.2 20.5 162 241-441 24-198 (304)
459 1tqj_A Ribulose-phosphate 3-ep 86.0 1.3 4.4E-05 41.6 6.6 123 258-426 18-144 (230)
460 3qld_A Mandelate racemase/muco 85.9 19 0.00066 36.2 15.8 137 241-431 139-277 (388)
461 1gte_A Dihydropyrimidine dehyd 85.9 20 0.00068 40.8 17.6 98 315-422 634-734 (1025)
462 2fym_A Enolase; RNA degradosom 85.7 4.8 0.00016 41.3 11.3 106 295-426 219-344 (431)
463 1m5w_A Pyridoxal phosphate bio 85.5 25 0.00085 33.3 18.6 150 241-431 5-163 (243)
464 3u9i_A Mandelate racemase/muco 85.4 11 0.00037 38.1 13.7 132 258-426 168-303 (393)
465 3hgj_A Chromate reductase; TIM 85.3 5.2 0.00018 39.8 11.1 97 326-425 142-261 (349)
466 2ozt_A TLR1174 protein; struct 84.9 6.5 0.00022 38.7 11.5 118 268-430 130-251 (332)
467 1ep3_A Dihydroorotate dehydrog 84.9 5.8 0.0002 38.2 11.0 93 315-422 98-195 (311)
468 3q94_A Fructose-bisphosphate a 84.8 6.1 0.00021 38.6 10.9 80 330-427 160-240 (288)
469 4gbu_A NADPH dehydrogenase 1; 84.8 2.9 9.8E-05 42.6 9.0 70 326-397 162-241 (400)
470 1nvm_A HOA, 4-hydroxy-2-oxoval 84.7 4.8 0.00016 40.0 10.4 88 326-426 27-116 (345)
471 2pge_A MENC; OSBS, NYSGXRC, PS 84.5 11 0.00038 37.7 13.2 125 258-426 165-294 (377)
472 2r14_A Morphinone reductase; H 84.3 9.7 0.00033 38.4 12.6 92 332-426 169-278 (377)
473 3inp_A D-ribulose-phosphate 3- 84.3 12 0.00039 35.7 12.4 131 270-449 54-193 (246)
474 3cnb_A DNA-binding response re 84.2 13 0.00046 29.9 11.6 89 331-449 43-132 (143)
475 2pcq_A Putative dihydrodipicol 84.2 2.1 7.1E-05 41.5 7.4 80 326-428 16-100 (283)
476 3hdg_A Uncharacterized protein 84.2 14 0.00048 29.8 11.7 61 380-448 66-126 (137)
477 2ftp_A Hydroxymethylglutaryl-C 84.2 12 0.00042 36.3 13.0 78 326-425 156-237 (302)
478 1me8_A Inosine-5'-monophosphat 84.1 1.3 4.6E-05 46.5 6.3 72 330-424 242-313 (503)
479 3l5l_A Xenobiotic reductase A; 83.9 2.1 7.1E-05 43.0 7.4 98 326-425 148-268 (363)
480 3b8i_A PA4872 oxaloacetate dec 83.7 16 0.00056 35.5 13.5 148 241-427 84-238 (287)
481 4h3d_A 3-dehydroquinate dehydr 83.6 11 0.00036 36.1 12.0 91 241-349 21-120 (258)
482 3kht_A Response regulator; PSI 83.2 9.7 0.00033 31.2 10.4 40 380-420 66-107 (144)
483 3lye_A Oxaloacetate acetyl hyd 83.2 36 0.0012 33.3 16.6 165 241-446 90-267 (307)
484 3ewb_X 2-isopropylmalate synth 83.2 34 0.0012 33.0 17.3 79 326-424 147-230 (293)
485 1z41_A YQJM, probable NADH-dep 82.9 21 0.00073 35.1 14.4 87 332-425 147-251 (338)
486 3bld_A Queuine tRNA-ribosyltra 82.9 22 0.00076 36.0 14.5 143 250-422 134-281 (386)
487 1rd5_A Tryptophan synthase alp 82.7 7.6 0.00026 36.7 10.6 97 317-423 19-125 (262)
488 3qw3_A Orotidine-5-phosphate d 82.5 2.6 9E-05 40.4 7.2 138 253-444 89-251 (255)
489 1s2w_A Phosphoenolpyruvate pho 82.4 38 0.0013 32.9 18.0 155 241-428 81-243 (295)
490 3fxg_A Rhamnonate dehydratase; 82.4 5 0.00017 41.7 9.7 98 295-426 203-301 (455)
491 2yxb_A Coenzyme B12-dependent 82.4 9.9 0.00034 33.4 10.5 68 331-420 58-125 (161)
492 3eul_A Possible nitrate/nitrit 82.3 16 0.00054 30.3 11.5 88 331-449 50-137 (152)
493 2p0o_A Hypothetical protein DU 82.2 44 0.0015 33.7 16.2 162 241-452 4-174 (372)
494 1gvf_A Tagatose-bisphosphate a 82.1 9.4 0.00032 37.2 11.0 80 330-427 156-236 (286)
495 2r91_A 2-keto-3-deoxy-(6-phosp 82.0 13 0.00045 35.8 12.1 83 258-355 20-103 (286)
496 3nwr_A A rubisco-like protein; 81.8 7.8 0.00027 39.9 10.8 121 188-349 136-261 (432)
497 2ash_A Queuine tRNA-ribosyltra 81.5 48 0.0016 33.5 16.5 143 251-424 133-276 (381)
498 1h1y_A D-ribulose-5-phosphate 81.5 3.8 0.00013 38.0 7.8 132 241-426 8-148 (228)
499 2hmc_A AGR_L_411P, dihydrodipi 81.5 14 0.00047 36.8 12.3 83 258-355 48-131 (344)
500 3fa4_A 2,3-dimethylmalate lyas 81.4 27 0.00093 34.2 14.1 152 241-428 82-244 (302)
No 1
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=100.00 E-value=2e-85 Score=678.83 Aligned_cols=373 Identities=36% Similarity=0.579 Sum_probs=318.9
Q ss_pred hhheeeeeeecccccchhhchhhhhhhhhcCCChHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEcCeeeCCcEEeCCCC
Q 012517 66 ATGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGF 145 (462)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~d~E~aH~~~~~~l~~~~~p~~~~~~~~~L~v~v~Gl~f~NPiglAAG~ 145 (462)
-+++||+++++.++- + +.+++|+||++|||+||++++.++++++.|+.+..+++.|+++++|++|+||||+|||+
T Consensus 29 ~~~~~~~~~~~~~~~---~--~~~~~~~~~~~dpE~aH~l~~~~~~~~~~~~~~~~~~~~l~v~~~Gl~f~NPvglAAG~ 103 (415)
T 3i65_A 29 QGRDPFESYNPEFFL---Y--DIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGF 103 (415)
T ss_dssp -------CCCHHHHH---H--HHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTS
T ss_pred cchhhHhhcCcHHHH---H--HHHHHHHhhcCCHHHHHHHHHHHHHhcCCCcccccccccccEEECCEECCCCCEECCCC
Confidence 367899999888752 2 44577788999999999999999999999987666778899999999999999999999
Q ss_pred CCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCC
Q 012517 146 DKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSS 225 (462)
Q Consensus 146 dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~ 225 (462)
|||++.++.++++||||||+|||||+||+|||+||+||++++.++||||||||+|++++.+++++...+...
T Consensus 104 dk~~~~~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~~~~l~~~~~~~~~-------- 175 (415)
T 3i65_A 104 DKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEE-------- 175 (415)
T ss_dssp STTCSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHHHHHHHHHHHHHTT--------
T ss_pred CCCHHHHHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHHHHHHHHHHhhccc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999864321100
Q ss_pred CCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHH
Q 012517 226 SPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAAR 305 (462)
Q Consensus 226 ~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~ 305 (462)
+.+. ...++||||++|+.|++.++||+++++++.+++||||||+|||||+|+|.+|+++.+.+|+++|++++
T Consensus 176 ----~~~~----~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~ 247 (415)
T 3i65_A 176 ----DKLL----SKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEI 247 (415)
T ss_dssp ----CGGG----TTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHH
T ss_pred ----cccc----cCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 0000 12479999999998888899999999999999999999999999999999999999999999999986
Q ss_pred HhhccC-----------CCCCCC-EEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCC
Q 012517 306 DEMQWG-----------EEGPPP-LLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSG 373 (462)
Q Consensus 306 ~~~~~~-----------~~~~~P-v~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG 373 (462)
+++... ...++| |+|||+||++++++.++|+.++++|+|||+++||+..+.+.. ....+.||+||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~---~~~~~~GGlSG 324 (415)
T 3i65_A 248 DNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIK---SFENKKGGVSG 324 (415)
T ss_dssp HHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCG---GGTTCCSEEEE
T ss_pred HhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccccccc---ccccccCCcCC
Confidence 543210 113678 999999999998999999999999999999999998765421 13346899999
Q ss_pred CcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCH
Q 012517 374 KPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSI 453 (462)
Q Consensus 374 ~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si 453 (462)
+++++.++++|+++++.+++++|||++|||.|++||+++|++|||+||+||+++|+||+++.+|+++|.++|+++||+||
T Consensus 325 ~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~~G~~si 404 (415)
T 3i65_A 325 AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNL 404 (415)
T ss_dssp GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999999987899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCC
Q 012517 454 IEAVGADYR 462 (462)
Q Consensus 454 ~e~~G~~~~ 462 (462)
+|++|.+|+
T Consensus 405 ~e~~G~~~~ 413 (415)
T 3i65_A 405 KEAIGRKHS 413 (415)
T ss_dssp TTTTTTTCC
T ss_pred HHHhChhcc
Confidence 999999885
No 2
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=100.00 E-value=2.8e-82 Score=650.45 Aligned_cols=356 Identities=54% Similarity=0.881 Sum_probs=318.4
Q ss_pred hhhhhhhh-cCCChHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEcCeeeCCcEEeCCCCCCCHHHHHHHHcCCccEEEe
Q 012517 87 TKLVNPFF-ALLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFVEV 165 (462)
Q Consensus 87 ~~~~~p~l-~~~d~E~aH~~~~~~l~~~~~p~~~~~~~~~L~v~v~Gl~f~NPiglAAG~dk~~e~~~~l~~lGfG~Vev 165 (462)
+++++|+| |++|||+||++++.+|+.++.|+.+..++++|+++++|++|+||||+|||+||+++.++.++++||||||+
T Consensus 10 ~~~~~~~l~~~~~pe~ah~~~~~~l~~~~~~~~~~~~~~~L~~~~~Gl~~~NPvglAaG~~~~~~~~~~~~~~g~G~v~~ 89 (367)
T 3zwt_A 10 AEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEI 89 (367)
T ss_dssp --CHHHHHHHHSCHHHHHHHHHHHHHTTCC---CCCCCGGGCEEETTEEESSSEEECTTSSTTSSSHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHhccccccccCCCCCCcEEECCEEcCCCCEeCCCcCCCHHHHHHHHhcCcCeEEe
Confidence 77899999 89999999999999999988887666788999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEE
Q 012517 166 GSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVN 245 (462)
Q Consensus 166 gtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvn 245 (462)
||||++||+|||+||+||++++.++||+|||||+|++++.++++++.++.. ..+. ...|+++|
T Consensus 90 ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~-------------~~~~----~~~pv~vn 152 (367)
T 3zwt_A 90 GSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQA-------------KLTE----DGLPLGVN 152 (367)
T ss_dssp EEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHH-------------HHHH----TTCCEEEE
T ss_pred CCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHHHHHHhhhcc-------------cccc----CCceEEEE
Confidence 999999999999999999999999999999999999999999986422100 0000 01379999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC
Q 012517 246 IGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD 325 (462)
Q Consensus 246 ig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd 325 (462)
|++||.|++.++||+++++++.+++||||||+||||++|++.+|+++.+.+++++|+++++++.. ..++||+|||+||
T Consensus 153 iggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~--~~~~Pv~vKi~p~ 230 (367)
T 3zwt_A 153 LGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRR--VHRPAVLVKIAPD 230 (367)
T ss_dssp ECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCG--GGCCEEEEEECSC
T ss_pred EecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccc--cCCceEEEEeCCC
Confidence 99999888889999999999999999999999999999999999999999999999988654311 2478999999999
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++++++.++|+.++++|+|+|+++||+.+|.+. ..+....+.||+||+++++.++++|+++++.+++++|||++|||.|
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~-~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s 309 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAG-LQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSS 309 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTT-CCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccc-cccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCC
Confidence 999999999999999999999999999877532 2233445789999999999999999999999988899999999999
Q ss_pred HHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 406 GEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 406 ~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
++||.++|++|||+||+||+++|+||+++.+|+++|.++|+++||+||+|++|.+|+
T Consensus 310 ~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~~m~~~G~~~i~e~~G~~~~ 366 (367)
T 3zwt_A 310 GQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 366 (367)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCSSHHHHTTGGGT
T ss_pred HHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHHHHHHcCCCCHHHhhCcccc
Confidence 999999999999999999999999999999999999999999999999999999886
No 3
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=100.00 E-value=1.3e-77 Score=627.56 Aligned_cols=382 Identities=36% Similarity=0.572 Sum_probs=319.1
Q ss_pred hhhHHHhhheeeeeeeccc-ccchhhchhhhhhhhhc-CCChHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEcCeeeCC
Q 012517 60 TLGLVIATGAYVSTVDEAT-FCGWLFSATKLVNPFFA-LLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSN 137 (462)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~-~~d~E~aH~~~~~~l~~~~~p~~~~~~~~~L~v~v~Gl~f~N 137 (462)
.+|...+.++|....|... .+++++ +.+++|+|| ++|||+||++++.++++++.|.....++..|+++++|++|+|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~E~ah~~~~~~~~~~~~~~~~~~~~~~l~~~i~Gl~~~N 93 (443)
T 1tv5_A 16 TGGQQMGRDLYDDDDKFESYNPEFFL--YDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFIN 93 (443)
T ss_dssp ----------------CCTTSTTCHH--HHHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESS
T ss_pred ccchhcchhhhhhHHHHhhcCcHHHH--HHHHHHHHHhcCCHHHHHHHHHHHHhccCCcccccCCCccCCeEECCEEeCC
Confidence 3566777777777666221 123343 568899887 799999999999999998888765555667899999999999
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|||+|||+||+++.++.++++||||||+||+|++||+|||+||+||++++.++||+|||||+|++.+.+++++.......
T Consensus 94 PvglAAG~dk~~~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~~ 173 (443)
T 1tv5_A 94 PFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEE 173 (443)
T ss_dssp SEEECTTTTTTCSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHH
T ss_pred CcEECCcccCccHHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999864321000
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDL 297 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~l 297 (462)
. ....+.++++||++|+.+++.++||+++++++.+++||||||+|||||+|+|++|+++.+.+|
T Consensus 174 ~----------------~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~i 237 (443)
T 1tv5_A 174 D----------------KLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNI 237 (443)
T ss_dssp C----------------STTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHH
T ss_pred c----------------cccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHH
Confidence 0 000124899999999888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC-----------------------------------------CCCCCC-EEEEecCCCChhhHHHHH
Q 012517 298 VKKVQAARDEMQWG-----------------------------------------EEGPPP-LLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 298 l~aV~~~~~~~~~~-----------------------------------------~~~~~P-v~vKispdl~~~~~~~ia 335 (462)
+++|+++++++... ...++| |+|||+||++++++.++|
T Consensus 238 l~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA 317 (443)
T 1tv5_A 238 ILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIA 317 (443)
T ss_dssp HHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHH
Confidence 99999886543210 013678 999999999988999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.++++|+|||+++||+..+.+. . ....+.||+||+++++.++++++++++.+++++|||++|||.|++||+++|++
T Consensus 318 ~~~~~aGaDgI~v~ntt~~~~d~-~--~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~a 394 (443)
T 1tv5_A 318 DVLLETNIDGMIISNTTTQINDI-K--SFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEA 394 (443)
T ss_dssp HHHHHTTCSEEEECCCBSCCCCC-G--GGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEECCCcccccc-c--ccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHc
Confidence 99999999999999999765432 1 22346899999999999999999999999878999999999999999999999
Q ss_pred CCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 416 GATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 416 GAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
|||+||+||+++|+||+++++|++++.++|+++||+||+|++|.+|+
T Consensus 395 GAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~~si~e~~G~~~~ 441 (443)
T 1tv5_A 395 GASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS 441 (443)
T ss_dssp TEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSSSGGGTTTTC-
T ss_pred CCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCCCCHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999998874
No 4
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=100.00 E-value=2.6e-67 Score=537.93 Aligned_cols=324 Identities=23% Similarity=0.313 Sum_probs=249.5
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEcCeeeCCcEEeCCC-CCCCHHHHHHHHcCCccEEEecccccCCCC
Q 012517 96 LLDAEVAHTLAVSAAARGWVPREKRPDPAILGLEVWGRKFSNPLGLAAG-FDKNAEAVEGLLGLGFGFVEVGSVTPVPQE 174 (462)
Q Consensus 96 ~~d~E~aH~~~~~~l~~~~~p~~~~~~~~~L~v~v~Gl~f~NPiglAAG-~dk~~e~~~~l~~lGfG~VevgtvT~~pq~ 174 (462)
=|+||.+|..++.+.+ ...+++.+|+|+++|++|+||||+||| |||++|.++.++++||||||+||||++||+
T Consensus 13 gl~P~~~h~~~~~~~~------~~g~~~~~L~v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~ 86 (354)
T 3tjx_A 13 GLVPRGSHMASMTGGQ------QMGRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALRE 86 (354)
T ss_dssp --------------------------CCCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBC
T ss_pred CCCchhhhhhhccchh------hcCCCCCceeEEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCccccc
Confidence 4899999987664432 123467899999999999999999999 899999999999999999999999999999
Q ss_pred CCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHH
Q 012517 175 GNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSED 254 (462)
Q Consensus 175 GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~ 254 (462)
|||+||+||++ +++||+|||||+|++++.+++++.... ...++++||+++ +++
T Consensus 87 GNp~PR~~~l~--~~~iN~~G~~n~G~~~~~~~~~~~~~~-----------------------~~~pvivsi~g~--~~~ 139 (354)
T 3tjx_A 87 GNPTPRYQALP--LGSINSMGLPNNGFDFYLAYAAEQHDY-----------------------GKKPLFLSMSGL--SMR 139 (354)
T ss_dssp CSCSCCEEEET--TEEEECCCCCBCCHHHHHHHHHHTCCT-----------------------TTCCEEEEECCS--SHH
T ss_pred CCCCCeEEEcc--cccccccccCCHHHHHHHHHHHHhhcc-----------------------CCceEEEEEecC--ChH
Confidence 99999999996 579999999999999999998865331 123689999775 666
Q ss_pred HHHH-HHHHHHHHcccCcEEEEeccCCCCCCccccc-CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHH
Q 012517 255 AAAD-YVQGVHTLSQYADYLVINVSSPNTPGLRMLQ-GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLE 332 (462)
Q Consensus 255 ~~~d-y~~~~~~l~~~aD~leiNvSsPnt~glr~lq-~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~ 332 (462)
++.+ +..+.+.+.+++||||||+|||||+|++.+| +++.+.+++++++++ .+.|+.+|++|+++..++.
T Consensus 140 ~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~---------~~~pv~vK~~p~~~~~~~~ 210 (354)
T 3tjx_A 140 ENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV---------YPHSFGVKMPPYFDFAAFD 210 (354)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHH---------CCSCEEEEECCCCSHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHH---------hhcccccccCCCCCchhHH
Confidence 5444 4444455556899999999999999999887 458888999999876 3789999999999987788
Q ss_pred HHHHHHHHcCCcEEEEecCCccCC---CCCC---CCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 333 DIAAVAVALRLDGLIISNTTISRP---DPVS---KNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 333 ~ia~~~~~~GvdgIivsNTt~~r~---~~~~---~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
.+++.+.+.+..+++.++++.... +... ......+.|||||+|+++.++++++++++.++ ++||||+|||.|+
T Consensus 211 ~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~-~~pIIg~GGI~s~ 289 (354)
T 3tjx_A 211 AAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCP-GKLIFGCGGVYTG 289 (354)
T ss_dssp HHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCT-TSEEEEESSCCSH
T ss_pred HHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcC-CCcEEEeCCcCCH
Confidence 888888776655554444443211 1000 11223467999999999999999999999986 7999999999999
Q ss_pred HHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 407 EDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 407 ~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
+||+++|++|||+||+||+++|+||+++.+|+++|.+||+++||+||+|++|+.|+
T Consensus 290 ~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~~G~~si~e~~G~~~~ 345 (354)
T 3tjx_A 290 EDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRYQTLDEFRGKVRT 345 (354)
T ss_dssp HHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTCCSGGGTTTCCBC
T ss_pred HHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHHHcCCCCHHHHhChhhc
Confidence 99999999999999999999999999999999999999999999999999998764
No 5
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=100.00 E-value=4.3e-65 Score=519.95 Aligned_cols=304 Identities=24% Similarity=0.334 Sum_probs=264.3
Q ss_pred CCCCCCCCccEEEcCeeeCCcEEeCCCCC-CCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 118 EKRPDPAILGLEVWGRKFSNPLGLAAGFD-KNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 118 ~~~~~~~~L~v~v~Gl~f~NPiglAAG~d-k~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
.+..|+++|+++++|++|+||||+|||+| +++|.++.++++||||||+||+|++||+|||+||+||++ .++||+|||
T Consensus 29 ~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~--~~~iN~~G~ 106 (354)
T 4ef8_A 29 QMGRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALP--LGSINSMGL 106 (354)
T ss_dssp -----CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEET--TEEEECCCC
T ss_pred hcCCCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecc--hhhhccCCC
Confidence 35678899999999999999999999998 899999999999999999999999999999999999998 789999999
Q ss_pred CchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcc----cCcE
Q 012517 197 NSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ----YADY 272 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~----~aD~ 272 (462)
||+|++++.+++++.... ...|+++||.++ +++ ||+++++++.+ ++|+
T Consensus 107 ~n~G~~~~~~~l~~~~~~-----------------------~~~pvivsI~G~--~~~---d~~~~a~~l~~~~~~g~d~ 158 (354)
T 4ef8_A 107 PNNGFDFYLAYAAEQHDY-----------------------GKKPLFLSMSGL--SMR---ENVEMCKRLAAVATEKGVI 158 (354)
T ss_dssp CBCCHHHHHHHHHHTCCT-----------------------TTCCEEEEECCS--SHH---HHHHHHHHHHHHHHHHCCE
T ss_pred CCcCHHHHHHHHHHHhhc-----------------------CCCcEEEEeccC--CHH---HHHHHHHHHhhhhhcCCCE
Confidence 999999999999764311 013799999653 555 89999998883 4899
Q ss_pred EEEeccCCCCCCccccc-CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcC-CcEEEEec
Q 012517 273 LVINVSSPNTPGLRMLQ-GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALR-LDGLIISN 350 (462)
Q Consensus 273 leiNvSsPnt~glr~lq-~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~G-vdgIivsN 350 (462)
||||+||||++|.+.++ +++.+.+++++|+++. ++||+|||+|+++.+++.++++.+.++| +|+|+++|
T Consensus 159 ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~---------~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~N 229 (354)
T 4ef8_A 159 LELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY---------PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCIN 229 (354)
T ss_dssp EEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC---------CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred EEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh---------CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEec
Confidence 99999999999988874 6799999999999863 6899999999999888999999999998 99999999
Q ss_pred CCc-cCC-CC-CCC--CCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchh
Q 012517 351 TTI-SRP-DP-VSK--NPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 351 Tt~-~r~-~~-~~~--~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Ta 425 (462)
|+. +.. +. ... .......|||||++++|.++++|+++++.. +++|||++|||.|++||.+++++|||+||+||+
T Consensus 230 T~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra 308 (354)
T 4ef8_A 230 SIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTA 308 (354)
T ss_dssp CEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHH
T ss_pred ccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHH
Confidence 972 110 00 000 011346899999999999999999999995 379999999999999999999999999999999
Q ss_pred hhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhcccC
Q 012517 426 FAYGGPALIPQIKAELAECLERDGFKSIIEAVGADY 461 (462)
Q Consensus 426 li~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G~~~ 461 (462)
++++||+++++|+++|.++|+++||+|++|++|..+
T Consensus 309 ~l~~GP~~~~~i~~~l~~~m~~~G~~si~el~G~~~ 344 (354)
T 4ef8_A 309 LQEEGPSIFERLTSELLGVMAKKRYQTLDEFRGKVR 344 (354)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred HHHhCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999865
No 6
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=100.00 E-value=2.1e-63 Score=506.25 Aligned_cols=302 Identities=21% Similarity=0.241 Sum_probs=251.5
Q ss_pred CCCCccEEEcCeeeCCcEEeCCCCCC-CHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchh
Q 012517 122 DPAILGLEVWGRKFSNPLGLAAGFDK-NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEG 200 (462)
Q Consensus 122 ~~~~L~v~v~Gl~f~NPiglAAG~dk-~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G 200 (462)
+.++|+++++|++|+||||+|||+|+ ++|.++.+.++||||||+||+|++||+|||+||+||++ .++||+|||||+|
T Consensus 34 ~m~~L~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~--~~~iN~~G~~n~G 111 (345)
T 3oix_A 34 SMVSTHTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTK--LGSINSMGLPNLG 111 (345)
T ss_dssp --CCCCEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECS--SEEEECCCCCBSC
T ss_pred ccCCcCeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecc--cchhccCCCCChh
Confidence 45789999999999999999999975 66999999999999999999999999999999999997 7899999999999
Q ss_pred HHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcc--cCcEEEEecc
Q 012517 201 IVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ--YADYLVINVS 278 (462)
Q Consensus 201 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~--~aD~leiNvS 278 (462)
++++++++++..++. ...|+++||+++ +++ ||+++++++.+ ++|+||||+|
T Consensus 112 ~~~~~~~l~~~~~~~----------------------~~~pvivsI~g~--~~~---d~~~~a~~l~~~g~~d~ielNis 164 (345)
T 3oix_A 112 INYYLDYVTELQKQP----------------------DSKNHFLSLVGM--SPE---ETHTILXMVEASKYQGLVELNLS 164 (345)
T ss_dssp HHHHHHHHHHHHHST----------------------TCCCCEEEECCS--SHH---HHHHHHHHHHHSSCCSEEEEECS
T ss_pred HHHHHHHHHHHhhcc----------------------CCCCEEEEecCC--CHH---HHHHHHHHHhccCCCcEEEEecC
Confidence 999999998753210 023799999864 555 99999999964 5679999999
Q ss_pred CCCCCCcccc-cCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCC
Q 012517 279 SPNTPGLRML-QGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPD 357 (462)
Q Consensus 279 sPnt~glr~l-q~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~ 357 (462)
|||++|++.+ ++++.+.+++++|+++ .++||+|||+||++.+++.++++.+...|+++|..+||+....+
T Consensus 165 CPn~~G~~~l~~~~e~l~~il~av~~~---------~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~ 235 (345)
T 3oix_A 165 CPNVPGXPQIAYDFETTDQILSEVFTY---------FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLV 235 (345)
T ss_dssp CCCSTTCCCGGGCHHHHHHHHHHHTTT---------CCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEEC
T ss_pred CCCcCCchhhcCCHHHHHHHHHHHHHH---------hCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeeccccccee
Confidence 9999998887 6789999999999865 36899999999975444444444444444444444444210000
Q ss_pred C-CCCC--CcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChH
Q 012517 358 P-VSKN--PVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 434 (462)
Q Consensus 358 ~-~~~~--~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i 434 (462)
. ...+ ....+.|||||++++|.++++|+++++.+++++|||++|||.|++||.++|++|||+||+||+++|.||+++
T Consensus 236 i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~ 315 (345)
T 3oix_A 236 IEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIF 315 (345)
T ss_dssp EETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHH
T ss_pred eccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHH
Confidence 0 0001 113468999999999999999999999998789999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHcCCCCHHHhhcccC
Q 012517 435 PQIKAELAECLERDGFKSIIEAVGADY 461 (462)
Q Consensus 435 ~~i~~~L~~~l~~~G~~si~e~~G~~~ 461 (462)
.+|+++|.++|+++||+|++|++|..+
T Consensus 316 ~~i~~~L~~~l~~~G~~si~e~~G~~~ 342 (345)
T 3oix_A 316 KRITKELXAIMTEKGYETLEDFRGKLN 342 (345)
T ss_dssp HHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHhHHh
Confidence 999999999999999999999999864
No 7
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=100.00 E-value=2.3e-60 Score=482.74 Aligned_cols=327 Identities=41% Similarity=0.674 Sum_probs=286.2
Q ss_pred hhhhhhhcCCChHHHHHHHHHHHhc----CCCCCCCCCCCCCccEEEcCeeeCCcEEeCCCCCCCHHHHHHHHcCCccEE
Q 012517 88 KLVNPFFALLDAEVAHTLAVSAAAR----GWVPREKRPDPAILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGFV 163 (462)
Q Consensus 88 ~~~~p~l~~~d~E~aH~~~~~~l~~----~~~p~~~~~~~~~L~v~v~Gl~f~NPiglAAG~dk~~e~~~~l~~lGfG~V 163 (462)
.+++|+||+||||+||++++.+|+. ++.|... .+.++|+++++|++|+|||++|||++++++..+.+++.|+|+|
T Consensus 4 ~~~~~~~~~~~~e~ah~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~i~g~~l~npi~~aag~~~~~~~~~~~a~~G~g~i 82 (336)
T 1f76_A 4 PFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVR-QKVPAKPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSI 82 (336)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHTTSGGGGGTC-CCCCCCCEEETTEEESSSEEECTTSSTTCCCHHHHHHTTCSEE
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhccCCcccccc-CCCCCCCeEECCEEcCCCcEeCcccCCcHHHHHHHHHcCccEE
Confidence 4889999999999999999999995 3333332 2348899999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEE
Q 012517 164 EVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILG 243 (462)
Q Consensus 164 evgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lg 243 (462)
++|+++++||.||++||+|++++|.+++|++||+|+|.+.+.+++++... ..+++
T Consensus 83 ~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~-------------------------~~~~~ 137 (336)
T 1f76_A 83 EIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY-------------------------DGVLG 137 (336)
T ss_dssp EEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCC-------------------------CSEEE
T ss_pred EeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhccc-------------------------CCcEE
Confidence 99999999999999999999999999999999999999999998875310 13799
Q ss_pred EEecCCCCCH--HHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE
Q 012517 244 VNIGKNKTSE--DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321 (462)
Q Consensus 244 vnig~nk~t~--~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK 321 (462)
+|+++++.++ +.++||.++++++.+++|+||+|++|||++|.|.+++.+.+.+++++|++++.+++...+.++||+||
T Consensus 138 v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vK 217 (336)
T 1f76_A 138 INIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVK 217 (336)
T ss_dssp EEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEE
Confidence 9999876443 34779999999998899999999999999999999999999999999999874331111236899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec
Q 012517 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG 401 (462)
Q Consensus 322 ispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G 401 (462)
++++++.+++.++++.++++|+|+|+++||+.++.+ ...++...+.||+||+++.+.+++.++++++.+++++|||++|
T Consensus 218 i~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~-~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~G 296 (336)
T 1f76_A 218 IAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSL-VQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVG 296 (336)
T ss_dssp CCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTT-STTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEES
T ss_pred ecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccc-cccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 999999889999999999999999999999877643 2223344568999999999999999999999997789999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 402 GISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 402 GI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
||.|++||.++|++|||+||+||+++++||+++++|+++|
T Consensus 297 GI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~~~l 336 (336)
T 1f76_A 297 GIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI 336 (336)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHHhhC
Confidence 9999999999999999999999999998999999999874
No 8
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=1e-55 Score=443.74 Aligned_cols=300 Identities=25% Similarity=0.313 Sum_probs=259.8
Q ss_pred ccEEEcCeeeCCcEEeCCCC-CCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHH
Q 012517 126 LGLEVWGRKFSNPLGLAAGF-DKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAV 204 (462)
Q Consensus 126 L~v~v~Gl~f~NPiglAAG~-dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~ 204 (462)
|+++++|++|+|||++|||+ ++|++.++.+.+.|||+|++||+|++||.|||+||+|+++ .++||++||+|+|.+.+
T Consensus 2 l~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~--~~~in~~g~~~~g~~~~ 79 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLE--LGSINSMGLPNLGFDYY 79 (311)
T ss_dssp CCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEET--TEEEECCCCCBSCHHHH
T ss_pred CceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecc--cceeecCCCCCccHHHH
Confidence 78999999999999999998 9999999999999999999999999999999999999997 68999999999999999
Q ss_pred HHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHccc-Cc-EEEEeccCCCC
Q 012517 205 AKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQY-AD-YLVINVSSPNT 282 (462)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD-~leiNvSsPnt 282 (462)
.+++++...... ...++++||..+ +.+ ||.++++++.++ +| +||||+||||+
T Consensus 80 ~~~~~~~~~~~~---------------------~~~p~~~~i~g~--~~~---~~~~~a~~~~~~g~d~~iein~~~P~~ 133 (311)
T 1jub_A 80 LDYVLKNQKENA---------------------QEGPIFFSIAGM--SAA---ENIAMLKKIQESDFSGITELNLSCPNV 133 (311)
T ss_dssp HHHHHHHHHHTC---------------------SSSCCEEEECCS--SHH---HHHHHHHHHHHSCCCSEEEEESCCCCS
T ss_pred HHHHHHHHHhcC---------------------CCCCEEEEcCCC--CHH---HHHHHHHHHHhcCCCeEEEEeccCCCC
Confidence 998875421100 013689999764 444 899999999875 79 99999999999
Q ss_pred CCccccc-CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCcc-CC-C--
Q 012517 283 PGLRMLQ-GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS-RP-D-- 357 (462)
Q Consensus 283 ~glr~lq-~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~-r~-~-- 357 (462)
+|.+.+. +.+.+.+++++|+++ .++||+||++|+++.+++.++++.++++|+|+|+++|++.. +. +
T Consensus 134 ~g~~~~g~~~e~~~~iv~~vr~~---------~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~ 204 (311)
T 1jub_A 134 PGEPQLAYDFEATEKLLKEVFTF---------FTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPE 204 (311)
T ss_dssp SSCCCGGGCHHHHHHHHHHHTTT---------CCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETT
T ss_pred CCcccccCCHHHHHHHHHHHHHh---------cCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccC
Confidence 8777775 778888999988764 36899999999998889999999999999999999999721 10 0
Q ss_pred -CCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHH
Q 012517 358 -PVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQ 436 (462)
Q Consensus 358 -~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~ 436 (462)
.........+.||+||+++++.+++.++++++.+++++|||++|||.|++||.++|++|||+||+||+++++||+++++
T Consensus 205 ~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~ 284 (311)
T 1jub_A 205 AESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDR 284 (311)
T ss_dssp TTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHH
T ss_pred CCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHH
Confidence 0000011235789999999999999999999999778999999999999999999999999999999999879999999
Q ss_pred HHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 437 IKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 437 i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
|++++.++|.++||+|++|++|..|+
T Consensus 285 i~~~l~~~l~~~g~~si~e~~g~~~~ 310 (311)
T 1jub_A 285 IIKELEEIMNQKGYQSIADFHGKLKS 310 (311)
T ss_dssp HHHHHHHHHHHHTCCSGGGTTTCCBC
T ss_pred HHHHHHHHHHHcCCCCHHHHhChhhc
Confidence 99999999999999999999998763
No 9
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=100.00 E-value=4.2e-53 Score=425.19 Aligned_cols=299 Identities=27% Similarity=0.373 Sum_probs=259.8
Q ss_pred CCccEEEcCeeeCCcEEeCCCC-CCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHH
Q 012517 124 AILGLEVWGRKFSNPLGLAAGF-DKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIV 202 (462)
Q Consensus 124 ~~L~v~v~Gl~f~NPiglAAG~-dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~ 202 (462)
.+|+++++|++|+|||++|||+ +++++.++.+.+.|||+|++||+|++||.|||+||+|+++ .+++|++||+|+|.+
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~--~~~in~~g~~~~g~~ 79 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFP--LGSINSMGLPNLGFD 79 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEET--TEEEECCCCCBSCHH
T ss_pred CCcceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecc--cceeecCCCCCcCHH
Confidence 3689999999999999999998 9999999999999999999999999999999999999997 689999999999999
Q ss_pred HHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHccc-Cc---EEEEecc
Q 012517 203 AVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQY-AD---YLVINVS 278 (462)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD---~leiNvS 278 (462)
.+.+++++... . ...++++||+.+ +.+ +|.++++++.++ +| +||||++
T Consensus 80 ~~~~~~~~~~~-~----------------------~~~p~~~~i~g~--~~~---~~~~~a~~~~~~g~d~~~~iein~~ 131 (314)
T 2e6f_A 80 FYLKYASDLHD-Y----------------------SKKPLFLSISGL--SVE---ENVAMVRRLAPVAQEKGVLLELNLS 131 (314)
T ss_dssp HHHHHHHHTCC-T----------------------TTCCEEEEECCS--SHH---HHHHHHHHHHHHHHHHCCEEEEECC
T ss_pred HHHHHHHHHhh-c----------------------CCCcEEEEeCCC--CHH---HHHHHHHHHHHhCCCcCceEEEEcC
Confidence 99888864311 0 023799999764 455 888888888775 79 9999999
Q ss_pred CCCCCCccccc-CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcC-CcEEEEecCCccC-
Q 012517 279 SPNTPGLRMLQ-GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALR-LDGLIISNTTISR- 355 (462)
Q Consensus 279 sPnt~glr~lq-~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~G-vdgIivsNTt~~r- 355 (462)
|||++|.+.+. +.+.+.+++++|+++. ++||+||++++++.+++.++++.+.++| +|+|+++|++...
T Consensus 132 ~P~~~g~~~~g~~~~~~~~ii~~vr~~~---------~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~ 202 (314)
T 2e6f_A 132 CPNVPGKPQVAYDFEAMRTYLQQVSLAY---------GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGL 202 (314)
T ss_dssp CCCSTTCCCGGGSHHHHHHHHHHHHHHH---------CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEE
T ss_pred CCCCCCchhhcCCHHHHHHHHHHHHHhc---------CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccc
Confidence 99998766664 7788899999998875 6899999999998889999999999999 9999999987210
Q ss_pred -CCC---CCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCC
Q 012517 356 -PDP---VSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGP 431 (462)
Q Consensus 356 -~~~---~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP 431 (462)
.+. ..........||+||+++++.+++.++++++.+ +++|||++|||.|++||.++|++|||+||++|+++++||
T Consensus 203 ~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p 281 (314)
T 2e6f_A 203 VIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGP 281 (314)
T ss_dssp CEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCT
T ss_pred cccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCc
Confidence 000 000011235789999999999999999999998 579999999999999999999999999999999998799
Q ss_pred ChHHHHHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 432 ALIPQIKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 432 ~~i~~i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
++++++++++.++|.++||+|++|++|..++
T Consensus 282 ~~~~~i~~~l~~~~~~~g~~~i~~~~g~~~~ 312 (314)
T 2e6f_A 282 GIFTRLEDELLEIMARKGYRTLEEFRGRVKT 312 (314)
T ss_dssp THHHHHHHHHHHHHHHHTCCSSTTTTTCCBC
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHhchHhh
Confidence 9999999999999999999999999998764
No 10
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=100.00 E-value=1.1e-45 Score=369.64 Aligned_cols=299 Identities=25% Similarity=0.334 Sum_probs=247.0
Q ss_pred CCCCCccEEEcCeeeCCcEEeCCCCCCCHH-HHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCch
Q 012517 121 PDPAILGLEVWGRKFSNPLGLAAGFDKNAE-AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSE 199 (462)
Q Consensus 121 ~~~~~L~v~v~Gl~f~NPiglAAG~dk~~e-~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~ 199 (462)
.++++|+++++|++|+|||++|||++++++ ..+.+...|||++++||+++.|+.||+.||+++.. .+++|++|++|.
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~~~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~--~g~~~~~g~~~~ 79 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETA--SGMLNAIGLQNP 79 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTSTTGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEET--TEEEECCCCCBC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCCHHHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECC--cccccccCCCCc
Confidence 467899999999999999999999988765 55555678999999999999999999999999874 679999999999
Q ss_pred hHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHc--ccCcEEEEec
Q 012517 200 GIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS--QYADYLVINV 277 (462)
Q Consensus 200 G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~--~~aD~leiNv 277 (462)
|.+.+.+++.+..++. . ...++++||+.+ +.+ +|.++++.+. ..+|+||||+
T Consensus 80 ~~~~~~~~~~~~~~~~-~--------------------~~~p~~v~l~~~--~~~---~~~~~a~~~~~~~g~d~iei~~ 133 (311)
T 1ep3_A 80 GLEVIMTEKLPWLNEN-F--------------------PELPIIANVAGS--EEA---DYVAVCAKIGDAANVKAIELNI 133 (311)
T ss_dssp CHHHHHHTHHHHHHHH-C--------------------TTSCEEEEECCS--SHH---HHHHHHHHHTTSTTEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhc-C--------------------CCCcEEEEEcCC--CHH---HHHHHHHHHhccCCCCEEEEeC
Confidence 9988876533221110 0 013799999875 444 8899999888 4699999999
Q ss_pred cCCCCC--CcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccC
Q 012517 278 SSPNTP--GLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISR 355 (462)
Q Consensus 278 SsPnt~--glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r 355 (462)
+|||++ |....++.+.+.++++++++.. ++||+||++|+++ ++.++++.+.+.|+|+|+++|+..+.
T Consensus 134 ~~p~~~~g~~~~g~~~~~~~eii~~v~~~~---------~~pv~vk~~~~~~--~~~~~a~~l~~~G~d~i~v~~~~~g~ 202 (311)
T 1ep3_A 134 SCPNVKHGGQAFGTDPEVAAALVKACKAVS---------KVPLYVKLSPNVT--DIVPIAKAVEAAGADGLTMINTLMGV 202 (311)
T ss_dssp CSEEGGGTTEEGGGCHHHHHHHHHHHHHHC---------SSCEEEEECSCSS--CSHHHHHHHHHTTCSEEEECCCEEEC
T ss_pred CCCCCCCchhhhcCCHHHHHHHHHHHHHhc---------CCCEEEEECCChH--HHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 999984 2233457788899999998752 6899999999875 67789999999999999999986443
Q ss_pred C-CC-CCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCCh
Q 012517 356 P-DP-VSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPAL 433 (462)
Q Consensus 356 ~-~~-~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~ 433 (462)
. +. ...+......||++|+++++.+++.++++++.+ ++|||++|||.|++|+.+++++|||+||++|++++ +|++
T Consensus 203 ~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~-~p~~ 279 (311)
T 1ep3_A 203 RFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-DPFV 279 (311)
T ss_dssp CBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH-CTTH
T ss_pred ccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc-CcHH
Confidence 2 10 001111223578999988888889999999988 79999999999999999999999999999999987 8999
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHhhcccC
Q 012517 434 IPQIKAELAECLERDGFKSIIEAVGADY 461 (462)
Q Consensus 434 i~~i~~~L~~~l~~~G~~si~e~~G~~~ 461 (462)
++++++++..+|..+||+|++|++|..|
T Consensus 280 ~~~i~~~l~~~~~~~g~~~~~~~~g~~~ 307 (311)
T 1ep3_A 280 CPKIIDKLPELMDQYRIESLESLIQEVK 307 (311)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHhChhc
Confidence 9999999999999999999999999765
No 11
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=6.1e-41 Score=384.28 Aligned_cols=300 Identities=21% Similarity=0.273 Sum_probs=253.0
Q ss_pred CCCCCccEEEcCeeeCCcEEeCCC-CCCCHHHHHHHHcCCccEEEecccccCC-CCCCCCCceeeec--------CCCcc
Q 012517 121 PDPAILGLEVWGRKFSNPLGLAAG-FDKNAEAVEGLLGLGFGFVEVGSVTPVP-QEGNPKPRIFRLR--------QEGAI 190 (462)
Q Consensus 121 ~~~~~L~v~v~Gl~f~NPiglAAG-~dk~~e~~~~l~~lGfG~VevgtvT~~p-q~GNp~PR~frl~--------~d~a~ 190 (462)
.+..+|+++++|++|+|||++||| ++++.+....+...|+|++++||+|+.+ +.||++||+++++ .++++
T Consensus 528 v~~v~ls~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~ 607 (1025)
T 1gte_A 528 VDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSF 607 (1025)
T ss_dssp GGGCCCCEEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCE
T ss_pred cccccceeeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhhe
Confidence 366789999999999999999998 5899999999999999999999999875 5599999999964 45679
Q ss_pred cccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcc-c
Q 012517 191 INRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ-Y 269 (462)
Q Consensus 191 iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~-~ 269 (462)
+|+++|+|.|++.+.+++.+..... | ..++++|+... .+++ +|.++++++.+ .
T Consensus 608 ~n~e~~~~~~~~~~~~~i~~~~~~~----------------~------~~~~i~~i~~g-~~~~---~~~~~a~~~~~~g 661 (1025)
T 1gte_A 608 LNIELISEKTAAYWCQSVTELKADF----------------P------DNIVIASIMCS-YNKN---DWMELSRKAEASG 661 (1025)
T ss_dssp EECCCSCSSCHHHHHHHHHHHHHHC----------------T------TSEEEEEECCC-SCHH---HHHHHHHHHHHTT
T ss_pred eeeccccchhHHHHHHHHHHHHhcC----------------C------CCCeEEEecCC-CCHH---HHHHHHHHHHhcC
Confidence 9999999999999998886543210 1 24788998421 1455 77777777743 5
Q ss_pred CcEEEEeccCCCCCCccc-----ccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCc
Q 012517 270 ADYLVINVSSPNTPGLRM-----LQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLD 344 (462)
Q Consensus 270 aD~leiNvSsPnt~glr~-----lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~Gvd 344 (462)
+|+|+||++|||+++.+. +++++.+.+++++|+++. ++||+||++|+.+ ++.++++.+.+.|+|
T Consensus 662 ~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~---------~~Pv~vK~~~~~~--~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 662 ADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV---------QIPFFAKLTPNVT--DIVSIARAAKEGGAD 730 (1025)
T ss_dssp CSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC---------SSCEEEEECSCSS--CHHHHHHHHHHHTCS
T ss_pred CCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh---------CCceEEEeCCChH--HHHHHHHHHHHcCCC
Confidence 999999999999975544 378899999999998763 6899999999887 789999999999999
Q ss_pred EEEEecCCccCCCC----CCCCCc----ccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 345 GLIISNTTISRPDP----VSKNPV----AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 345 gIivsNTt~~r~~~----~~~~~~----~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
+|+++||+.++... ...+.. ....||+||+++++.++++++++++.++ ++|||++|||.|++||.++|++|
T Consensus 731 ~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~-~ipvi~~GGI~s~~da~~~l~~G 809 (1025)
T 1gte_A 731 GVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALP-GFPILATGGIDSAESGLQFLHSG 809 (1025)
T ss_dssp EEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHST-TCCEEEESSCCSHHHHHHHHHTT
T ss_pred EEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcC-CCCEEEecCcCCHHHHHHHHHcC
Confidence 99999998776421 111111 1357899999999999999999999984 69999999999999999999999
Q ss_pred CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 417 ATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
|++||++|++++++|.++.+++++|..+|...||++++|++|
T Consensus 810 a~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 810 ASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp CSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred CCEEEEeeccccCCccHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 999999999998899999999999999999999999999998
No 12
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.94 E-value=3.7e-25 Score=225.36 Aligned_cols=262 Identities=16% Similarity=0.135 Sum_probs=178.9
Q ss_pred CCCCCccEEEcCeeeCCcEEeCC--CCC-CCH-----HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccc
Q 012517 121 PDPAILGLEVWGRKFSNPLGLAA--GFD-KNA-----EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIIN 192 (462)
Q Consensus 121 ~~~~~L~v~v~Gl~f~NPiglAA--G~d-k~~-----e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN 192 (462)
.++.+++++++|.+|+|||++|+ |++ +++ .....+.+.|+++ ++++.+... .+
T Consensus 40 ~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~-~~~~~~~~l--~~---------------- 100 (349)
T 1p0k_A 40 LEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPL-AVGSQMSAL--KD---------------- 100 (349)
T ss_dssp GGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCE-ECCCCTTTT--TC----------------
T ss_pred cccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcE-Eeccchhcc--cC----------------
Confidence 35688999999999999999998 776 555 3445577789887 677765321 01
Q ss_pred cCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcE
Q 012517 193 RCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADY 272 (462)
Q Consensus 193 ~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~ 272 (462)
+....+.+.++.... ..|+++|++.+ .+++ ++.+.++.+. +|+
T Consensus 101 ------~~~~~~~~~~~~~~~-------------------------~~pv~~~i~~~-~~~~---~~~~~~~~~g--ad~ 143 (349)
T 1p0k_A 101 ------PSERLSYEIVRKENP-------------------------NGLIFANLGSE-ATAA---QAKEAVEMIG--ANA 143 (349)
T ss_dssp ------HHHHHHHHHHHHHCS-------------------------SSCEEEEEETT-CCHH---HHHHHHHHTT--CSE
T ss_pred ------cccccceehhhhhCC-------------------------CceeEEeecCC-CCHH---HHHHHHHhcC--CCe
Confidence 111222222222110 23788999853 2444 4555566655 999
Q ss_pred EEEeccCCCCCCcccccCch--HHHHHHHHHHHHHHhhccCCCCCCCEEEEe-cCCCChhhHHHHHHHHHHcCCcEEEEe
Q 012517 273 LVINVSSPNTPGLRMLQGRK--QLKDLVKKVQAARDEMQWGEEGPPPLLVKI-APDLSKEDLEDIAAVAVALRLDGLIIS 349 (462)
Q Consensus 273 leiNvSsPnt~glr~lq~~~--~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi-spdl~~~~~~~ia~~~~~~GvdgIivs 349 (462)
|++|++|||... ....+++ .+.++++++++. .++||++|+ .++++ .+.++.+.++|+|+|+++
T Consensus 144 i~i~~~~~~~~~-~~~~~~~~~~~~~~i~~vr~~---------~~~Pv~vK~~~~~~~----~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 144 LQIHLNVIQEIV-MPEGDRSFSGALKRIEQICSR---------VSVPVIVKEVGFGMS----KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp EEEEECTTTTC---------CTTHHHHHHHHHHH---------CSSCEEEEEESSCCC----HHHHHHHHHHTCSEEEEE
T ss_pred EEecccchhhhc-CCCCCcchHHHHHHHHHHHHH---------cCCCEEEEecCCCCC----HHHHHHHHHcCCCEEEEc
Confidence 999999998632 1111222 256777777765 368999998 45565 355788899999999999
Q ss_pred cCCccCCCCCCC-CCc----ccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 012517 350 NTTISRPDPVSK-NPV----AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 350 NTt~~r~~~~~~-~~~----~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~T 424 (462)
|+.......... ... ....+|++ +.+.++++++.+ +++|||++|||.+++|+.+++.+|||+||++|
T Consensus 210 ~~ggt~~~~~e~~r~~~~~~~~~~~g~~-------~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 210 GYGGTNFSKIENLRRQRQISFFNSWGIS-------TAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp C---------------CCGGGGTTCSCC-------HHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CCCCcchhhHHHhhcccchhhhhccCcc-------HHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 873210000000 000 00123333 456778888877 47999999999999999999999999999999
Q ss_pred hhhhc----CC----ChHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 425 AFAYG----GP----ALIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 425 ali~~----GP----~~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
++++. |+ ..+..++++|+.+|...|+.+++|+++..
T Consensus 282 ~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~el~~~~ 325 (349)
T 1p0k_A 282 HFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAP 325 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBHHHHTTCC
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhCC
Confidence 99985 66 78899999999999999999999999864
No 13
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.94 E-value=1e-24 Score=221.57 Aligned_cols=277 Identities=18% Similarity=0.160 Sum_probs=200.8
Q ss_pred cEEEcCeeeCCcEEeCC-C--C-CC-CH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccC
Q 012517 127 GLEVWGRKFSNPLGLAA-G--F-DK-NA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRC 194 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA-G--~-dk-~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~ 194 (462)
|+++.+++|+|+|.+|+ . . +. ++ +.+..+++.|+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 8 p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~-g~~~~~~~~i~~d~-~i--- 82 (340)
T 3gr7_A 8 PYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQ-GRISERDLGIWSDD-HI--- 82 (340)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG-GCSSTTSEECSSTT-HH---
T ss_pred CEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEeccc-ccCCCCCcccCCHH-HH---
Confidence 68899999999999997 2 2 21 33 467778889999999998887763 55556666666554 45
Q ss_pred CCCchhHHHHHHHHHHhhccCcc--cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHH----HHHHHHHHHHHcc
Q 012517 195 GFNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDA----AADYVQGVHTLSQ 268 (462)
Q Consensus 195 G~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~----~~dy~~~~~~l~~ 268 (462)
+|+..+++.+++...+... .|.++..... ..|.++|..+..-.-... ..+|.++ +++|+++++++.+
T Consensus 83 ----~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~--~~~~~pS~~~~~~~~~~p-~~mt~~eI~~ii~~f~~aA~~a~~ 155 (340)
T 3gr7_A 83 ----AGLRELVGLVKEHGAAIGIQLAHAGRKSQVP--GEIIAPSAVPFDDSSPTP-KEMTKADIEETVQAFQNGARRAKE 155 (340)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEEECCGGGCCSS--SCCEESSSCCSSTTSCCC-EECCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCCeEEEEeccCCCccCCC--CCccCCCCccccCCCCCC-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999987765432 3434322211 112233322110000000 1245444 5799999999877
Q ss_pred -cCcEEEEecc---------CCCCCCc-----ccccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC------C
Q 012517 269 -YADYLVINVS---------SPNTPGL-----RMLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD------L 326 (462)
Q Consensus 269 -~aD~leiNvS---------sPnt~gl-----r~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd------l 326 (462)
.+|+||||.. ||+++-. .+++++ +++.+++++|++++ +.||.|||+|+ .
T Consensus 156 aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v---------~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 156 AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW---------DGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---------CSCEEEEEESCCCSTTSC
T ss_pred cCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc---------CCceEEEeccccccCCCC
Confidence 5999999987 6998622 135555 78899999999873 68999999996 4
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 327 ~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
+.++..++++.+++.|+|.|++++...... .. ..++. ..++.++++++.+ ++|||++|||.|+
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~------~~------~~~~~---~~~~~~~~ik~~~--~iPVi~~GgI~s~ 289 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPA------RM------NVYPG---YQVPFAELIRREA--DIPTGAVGLITSG 289 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCC------CC------CCCTT---TTHHHHHHHHHHT--TCCEEEESSCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCC------CC------CCCcc---ccHHHHHHHHHHc--CCcEEeeCCCCCH
Confidence 567899999999999999999997542110 00 01111 2568889999999 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 407 EDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 407 ~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
++|.++|+.| ||+|+++|+++. +|+|++++++++.
T Consensus 290 e~a~~~L~~G~aD~V~iGR~~la-nPdl~~ki~~~l~ 325 (340)
T 3gr7_A 290 WQAEEILQNGRADLVFLGRELLR-NPYWPYAAARELG 325 (340)
T ss_dssp HHHHHHHHTTSCSEEEECHHHHH-CTTHHHHHHHHTT
T ss_pred HHHHHHHHCCCeeEEEecHHHHh-CchHHHHHHHHCC
Confidence 9999999999 999999999986 7999999998764
No 14
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.93 E-value=1.1e-24 Score=222.18 Aligned_cols=282 Identities=18% Similarity=0.187 Sum_probs=200.9
Q ss_pred cEEEcCeeeCCcEEeCC-C-C--CCCH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCC
Q 012517 127 GLEVWGRKFSNPLGLAA-G-F--DKNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCG 195 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA-G-~--dk~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G 195 (462)
|+++.+++|+|+|.+|+ . + +.++ +.+..+++.|+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 7 p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~-g~~~~~~~~i~~d~-~i---- 80 (349)
T 3hgj_A 7 PLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPL-GRISPYDLGIWSED-HL---- 80 (349)
T ss_dssp CEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG-GCSSTTSCBCSSGG-GH----
T ss_pred CeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeeccc-ccCCCCcCccCcHH-HH----
Confidence 68899999999999997 2 1 2233 466778889999999998887764 55555555555444 44
Q ss_pred CCchhHHHHHHHHHHhhccCcc--cccccCCCCCC--------CcccCCCCCCCceEEEEecCCCCCHHH----HHHHHH
Q 012517 196 FNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPN--------DEVKAGGKAGPGILGVNIGKNKTSEDA----AADYVQ 261 (462)
Q Consensus 196 ~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~--------~~~p~~~~~~~~~lgvnig~nk~t~~~----~~dy~~ 261 (462)
+|+..+++.+++...+... .|.++...... ...|.++|..+..-+-... ..+|.++ +++|++
T Consensus 81 ---~~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p-~~mt~~eI~~ii~~f~~ 156 (349)
T 3hgj_A 81 ---PGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVP-EPLDEAGMERILQAFVE 156 (349)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCC-EECCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCC-ccCCHHHHHHHHHHHHH
Confidence 8899999999987765432 34443221100 0112233322110000000 1245544 579999
Q ss_pred HHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC
Q 012517 262 GVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD 325 (462)
Q Consensus 262 ~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd 325 (462)
+++++.+ .+|+||||..| |+++-.. +++++ +++.+++++|++++ +.++||.|||+|+
T Consensus 157 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~av-------G~d~pV~vRls~~ 229 (349)
T 3hgj_A 157 GARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVV-------PRELPLFVRVSAT 229 (349)
T ss_dssp HHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHS-------CTTSCEEEEEESC
T ss_pred HHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHh-------cCCceEEEEeccc
Confidence 9999876 59999999888 9987221 24555 68889999999875 4578999999995
Q ss_pred ------CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 326 ------LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 326 ------l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
++.++..++++.+.+.|+|.|.+++......... + .++ ...++.++++++.+ ++|||+
T Consensus 230 ~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~---~--------~~~---~~~~~~~~~ir~~~--~iPVi~ 293 (349)
T 3hgj_A 230 DWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRI---P--------LAP---GFQVPFADAVRKRV--GLRTGA 293 (349)
T ss_dssp CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCC---C--------CCT---TTTHHHHHHHHHHH--CCEEEE
T ss_pred cccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCccccc---C--------CCc---cccHHHHHHHHHHc--CceEEE
Confidence 5667899999999999999999997532211000 0 111 12567889999998 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+|||.|+++|.++|+.| ||+|+++|+++. +|+|+.++++++.
T Consensus 294 ~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la-nPdl~~k~~~~l~ 336 (349)
T 3hgj_A 294 VGLITTPEQAETLLQAGSADLVLLGRVLLR-DPYFPLRAAKALG 336 (349)
T ss_dssp CSSCCCHHHHHHHHHTTSCSEEEESTHHHH-CTTHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHCCCceEEEecHHHHh-CchHHHHHHHHCC
Confidence 99999999999999999 999999999986 7999999998764
No 15
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.93 E-value=1.1e-23 Score=213.77 Aligned_cols=276 Identities=15% Similarity=0.158 Sum_probs=190.9
Q ss_pred cEEEcCeeeCCcEEeCC--CC-C--CCH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccC
Q 012517 127 GLEVWGRKFSNPLGLAA--GF-D--KNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRC 194 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G~-d--k~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~ 194 (462)
++++.+++|+|+|.+|+ +. + .++ +.+..+++.|+|.|+++.+.+.|+ |...|+...+.+|+ .+
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~-g~~~~~~~~i~~d~-~~--- 82 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQ-GRITDQDLGIWSDE-HI--- 82 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG-GCSSTTSCBCSSTH-HH---
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeecccc-ccCCCCCcccCCHH-HH---
Confidence 57899999999999997 33 2 233 346777888999999999877653 33333333333322 23
Q ss_pred CCCchhHHHHHHHHHHhhccCcc--cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHH----HHHHHHHHHHHcc
Q 012517 195 GFNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDA----AADYVQGVHTLSQ 268 (462)
Q Consensus 195 G~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~----~~dy~~~~~~l~~ 268 (462)
++...+++.+++...+... .|.++..... ..|.++|..+....-.. ...+|.++ +++|+++++++.+
T Consensus 83 ----~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~--~~~~~pS~~~~~~~~~~-p~~mt~~eI~~~i~~~~~aA~~a~~ 155 (338)
T 1z41_A 83 ----EGFAKLTEQVKEQGSKIGIQLAHAGRKAELE--GDIFAPSAIAFDEQSAT-PVEMSAEKVKETVQEFKQAAARAKE 155 (338)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEEECCGGGCCCS--SCCEESSSCCSSTTSCC-CEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhcCCEEEEEecCCCcccCCC--CCCcCCCCCCCCCCCCC-CccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5677788888876543221 2222211110 11222222111000000 01234444 5799999999876
Q ss_pred -cCcEEEEeccC---------CCCCCcc------cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC------
Q 012517 269 -YADYLVINVSS---------PNTPGLR------MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD------ 325 (462)
Q Consensus 269 -~aD~leiNvSs---------Pnt~glr------~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd------ 325 (462)
.+|.||||..| |+++ .| +++++ +++.+++++|++++ +.||.|||+++
T Consensus 156 aGfDgVeih~~~gyLl~qFlsp~~n-~R~d~yGGslenr~r~~~eiv~avr~~v---------~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 156 AGFDVIEIHAAHGYLIHEFLSPLSN-HRTDEYGGSPENRYRFLREIIDEVKQVW---------DGPLFVRVSASDYTDKG 225 (338)
T ss_dssp TTCSEEEEEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHC---------CSCEEEEEECCCCSTTS
T ss_pred cCCCEEEeccccchHHHHccCCCcC-CcCcccCcchhhhHHHHHHHHHHHHHHc---------CCcEEEEecCcccCCCC
Confidence 59999999875 9986 33 24444 77889999998873 68999999995
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.++..++++.+++.|+|+|++++.+..... . + .++ ...++.++++++.+ ++|||++|||.|
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~-~---~--------~~~---~~~~~~~~~ir~~~--~iPVi~~Ggi~s 288 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHAD-I---N--------VFP---GYQVSFAEKIREQA--DMATGAVGMITD 288 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCC-C---C--------CCT---TTTHHHHHHHHHHH--CCEEEECSSCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCC-C---C--------CCc---cchHHHHHHHHHHC--CCCEEEECCCCC
Confidence 56678999999999999999999987632100 0 0 111 12568889999999 799999999999
Q ss_pred HHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 406 GEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 406 ~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+++|.++|+.| ||+|+++|+++. +|++++++++++.
T Consensus 289 ~~~a~~~l~~G~aD~V~iGR~~i~-nPdl~~ki~~~~~ 325 (338)
T 1z41_A 289 GSMAEEILQNGRADLIFIGRELLR-DPFFARTAAKQLN 325 (338)
T ss_dssp HHHHHHHHHTTSCSEEEECHHHHH-CTTHHHHHHHHTT
T ss_pred HHHHHHHHHcCCceEEeecHHHHh-CchHHHHHHcCCC
Confidence 99999999999 999999999987 6999999998875
No 16
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.92 E-value=1.6e-24 Score=222.07 Aligned_cols=281 Identities=16% Similarity=0.167 Sum_probs=198.6
Q ss_pred cEEEcCeeeCCcEEeCC-C--CCCC-------HHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA-G--FDKN-------AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA-G--~dk~-------~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
|+++.+++|+|+|.+|+ . ...+ .+.+..+++.|+|.|+++.+.+.|. |...|+...+.+|+ .|
T Consensus 7 P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~-g~~~~~~~~i~~d~-~i----- 79 (363)
T 3l5l_A 7 PYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE-GRITPGCAGIWSDA-HA----- 79 (363)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGG-GCSSTTCCBCSSHH-HH-----
T ss_pred CeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCcc-ccCCCCcceecCHH-HH-----
Confidence 68899999999999997 2 1223 3467778889999999998887764 55555555555443 44
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCC-------------CCc-ccCCCCCCCceEE-EEecCCCCCHHH----
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP-------------NDE-VKAGGKAGPGILG-VNIGKNKTSEDA---- 255 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~-------------~~~-~p~~~~~~~~~lg-vnig~nk~t~~~---- 255 (462)
+|+..+++.+++...+... .|.++..... ..+ .|.++|..+.... -... ..+|.++
T Consensus 80 --~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p-~~mt~~eI~~i 156 (363)
T 3l5l_A 80 --QAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVP-REMTLDDIARV 156 (363)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCC-EECCHHHHHHH
T ss_pred --HHHHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCC-ccCCHHHHHHH
Confidence 7889999999987665432 3433322100 011 1223332211000 0000 1245544
Q ss_pred HHHHHHHHHHHcc-cCcEEEEec---------cCCCCCCcc------cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 256 AADYVQGVHTLSQ-YADYLVINV---------SSPNTPGLR------MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 256 ~~dy~~~~~~l~~-~aD~leiNv---------SsPnt~glr------~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
+++|+++++++.+ .+|+||||. .||+++ .| +++++ +++.+++++|++++ +.++||
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N-~R~D~yGGslenR~r~~~eiv~aVr~av-------g~d~pV 228 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSN-KRTDAYGGSFDNRSRFLLETLAAVREVW-------PENLPL 228 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHTTS-------CTTSCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcC-CCCcccCcCHHHHHHHHHHHHHHHHHHc-------CCCceE
Confidence 5799999998876 599999985 589996 34 24555 67889999988764 347899
Q ss_pred EEEecCC-------CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 319 LVKIAPD-------LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 319 ~vKispd-------l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.|||+++ .+.++..++++.+.+.|+|.|.+++++....... + .++. ..++.++++++.+
T Consensus 229 ~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~---~--------~~~~---~~~~~~~~ir~~~ 294 (363)
T 3l5l_A 229 TARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNI---P--------WGPA---FMGPIAERVRREA 294 (363)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCC---C--------CCTT---TTHHHHHHHHHHH
T ss_pred EEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccccccc---C--------CCcc---hhHHHHHHHHHHc
Confidence 9999985 4456888999999999999999998643211000 0 1111 2467889999998
Q ss_pred CCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 392 RGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 392 ~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
++|||++|||.++++|.++|+.| ||+|+++|+++. +|+|+++++++|.
T Consensus 295 --~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la-nPdl~~k~~~~lg 343 (363)
T 3l5l_A 295 --KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA-DPHWAYFAAKELG 343 (363)
T ss_dssp --TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH-CTTHHHHHHHHTT
T ss_pred --CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh-CchHHHHHHHHcC
Confidence 79999999999999999999999 999999999987 7999999998874
No 17
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.91 E-value=1.1e-23 Score=214.27 Aligned_cols=275 Identities=12% Similarity=0.097 Sum_probs=194.2
Q ss_pred cEEEcCeeeCCcEEeCC-C--C-CCC-------HHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCC
Q 012517 127 GLEVWGRKFSNPLGLAA-G--F-DKN-------AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCG 195 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA-G--~-dk~-------~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G 195 (462)
|+++.+++|+|+|.+|+ . . +.+ .+.+..+++.|+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 7 P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~-g~~~~~~~gi~~d~-~i---- 80 (343)
T 3kru_A 7 PLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESR-GRITDHDLGIWNDE-QV---- 80 (343)
T ss_dssp CEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGG-GCSSTTSCBCSSHH-HH----
T ss_pred cceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhc-CccccccccccCHH-HH----
Confidence 68899999999999997 2 2 223 3567778889999999998887763 44445544454433 44
Q ss_pred CCchhHHHHHHHHHHhhccCcc--cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHH----HHHHHHHHHHHcc-
Q 012517 196 FNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDA----AADYVQGVHTLSQ- 268 (462)
Q Consensus 196 ~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~----~~dy~~~~~~l~~- 268 (462)
+|+..+++.+++...+... .|.++.... ....|.++|..+..-..... ..+|.++ +++|+++++++.+
T Consensus 81 ---~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~-~g~~~~apS~i~~~~~~~~p-~~mt~~eI~~ii~~f~~AA~~a~~a 155 (343)
T 3kru_A 81 ---KELKKIVDICKANGAVMGIQLAHAGRKCNI-SYEDVVGPSPIKAGDRYKLP-RELSVEEIKSIVKAFGEAAKRANLA 155 (343)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEEECCGGGCCC-TTSCCEESSSCCSSTTSCCC-EECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhcCCceEeeehhhccCccCc-chhhccCCCcCCCCccccCc-hhcCHHHHHHHHHHHHHHHhhcccc
Confidence 7889999999987765432 343432221 11112333322110000000 1245544 5799999999876
Q ss_pred cCcEEEEe---------ccCCCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC------CC
Q 012517 269 YADYLVIN---------VSSPNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD------LS 327 (462)
Q Consensus 269 ~aD~leiN---------vSsPnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd------l~ 327 (462)
.+|+|||| |.||+++-.. +++++ +++.+++++|++++ +.++||.|||+++ .+
T Consensus 156 GfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~av-------g~d~pv~vRls~~~~~~~g~~ 228 (343)
T 3kru_A 156 GYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNW-------PENKPIFVRVSADDYMEGGIN 228 (343)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTS-------CTTSCEEEEEECCCSSTTSCC
T ss_pred CCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcC-------CccCCeEEEeechhhhccCcc
Confidence 59999999 9999987322 35555 78899999999875 3478999999995 34
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHH
Q 012517 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGE 407 (462)
Q Consensus 328 ~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~ 407 (462)
.++..++++.+++. +|.|.+++...... +.. . ++ ...++.++++++.+ ++|||++|||.+++
T Consensus 229 ~~~~~~~a~~l~~~-vd~i~vs~g~~~~~------~~~-~-----~~---~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e 290 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VDLIDVSSGGLLNV------DIN-L-----YP---GYQVKYAETIKKRC--NIKTSAVGLITTQE 290 (343)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEECCCSSCC------CCC-C-----CT---TTTHHHHHHHHHHH--TCEEEEESSCCCHH
T ss_pred HHHHHHHHHHhhcc-ccEEeccCCceEee------eec-c-----cC---ceeehHHHHHHHhc--CcccceeeeeeHHH
Confidence 57889999999999 99999974321110 000 0 00 12568889999999 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEchhhhhcCCChHHHHH
Q 012517 408 DAYRKIRAG-ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 408 dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
+|.++|+.| ||+|+++|+++. +|+|+.+++
T Consensus 291 ~Ae~~l~~G~aD~V~iGR~~la-nPdl~~k~~ 321 (343)
T 3kru_A 291 LAEEILSNERADLVALGRELLR-NPYWVLHTY 321 (343)
T ss_dssp HHHHHHHTTSCSEEEESHHHHH-CTTHHHHTC
T ss_pred HHHHHHhchhhHHHHHHHHHhc-CCeEEEEEe
Confidence 999999999 999999999986 799999987
No 18
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.91 E-value=1.3e-22 Score=211.20 Aligned_cols=301 Identities=18% Similarity=0.200 Sum_probs=201.8
Q ss_pred CCCCCCC-CCCCCCc--cEEE-cCeeeCCcEEeCC---CC-CCCH-------HHHHHHHcCCccEEEecccccCCCCCCC
Q 012517 113 GWVPREK-RPDPAIL--GLEV-WGRKFSNPLGLAA---GF-DKNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNP 177 (462)
Q Consensus 113 ~~~p~~~-~~~~~~L--~v~v-~Gl~f~NPiglAA---G~-dk~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp 177 (462)
|++|+.. +..-+.| |+++ .|++|+|+|.+|+ +. +.+| +.+..++. |+|.|+++.+.+.|. |..
T Consensus 13 ~~~~~~~~M~~~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~-G~GLiIte~~~V~~~-g~~ 90 (419)
T 3l5a_A 13 GLVPRGSHMYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPY-GKL 90 (419)
T ss_dssp --------CCTTGGGGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SCSEEEEEEEESSGG-GCC
T ss_pred CcccccccccchhhcCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhc-CCcEEEecceEeCcc-ccc
Confidence 6788753 2222333 7999 9999999999997 22 3333 34555555 899999998888763 666
Q ss_pred CCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc--cccccCCCCC--CCcccCCCCCCCceE-EEEecCCCCC
Q 012517 178 KPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP--NDEVKAGGKAGPGIL-GVNIGKNKTS 252 (462)
Q Consensus 178 ~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~~~p~~~~~~~~~l-gvnig~nk~t 252 (462)
.|+...+.+|+ .| +|+..+++.+++...+..+ .|.++..... ....|.++|..+... ...... .+|
T Consensus 91 ~~~~~gi~~d~-~i-------~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr-~mt 161 (419)
T 3l5a_A 91 FEYGFNIDHDA-CI-------PGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVI-AMS 161 (419)
T ss_dssp STTCEECSSGG-GH-------HHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEE-ECC
T ss_pred CCCccccccHH-HH-------HHHHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCc-cCC
Confidence 66666666554 45 8999999999987665432 3333321100 001122233110000 000111 346
Q ss_pred HHH----HHHHHHHHHHHcc-cCcEEEEeccC---------CCCCCcc------cc-cCc-hHHHHHHHHHHHHHHhhcc
Q 012517 253 EDA----AADYVQGVHTLSQ-YADYLVINVSS---------PNTPGLR------ML-QGR-KQLKDLVKKVQAARDEMQW 310 (462)
Q Consensus 253 ~~~----~~dy~~~~~~l~~-~aD~leiNvSs---------Pnt~glr------~l-q~~-~~l~~ll~aV~~~~~~~~~ 310 (462)
.++ +++|+++++++.+ .+|+||||..| |++| .| ++ +++ +++.+++++|++++.+-
T Consensus 162 ~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N-~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~-- 238 (419)
T 3l5a_A 162 HEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSN-RRTDHYGADSLKNRARLCLEVMRAVQEVIDKE-- 238 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTC-CCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCccc-ccccCCCCchhhhhhHHHHHHHHHHHHHHhhh--
Confidence 554 5799999999987 59999998665 9987 33 34 666 78999999999987321
Q ss_pred CCCCCCCEEEEecCC--------CChhhHHHHHHHHHH-cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchH
Q 012517 311 GEEGPPPLLVKIAPD--------LSKEDLEDIAAVAVA-LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN 381 (462)
Q Consensus 311 ~~~~~~Pv~vKispd--------l~~~~~~~ia~~~~~-~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al 381 (462)
.+.++||.|||+|+ ++.++..++++.+.+ .|+|.|++++.+..... .. ...+|+. ...
T Consensus 239 -~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~-~~--------~~~~g~~---~~~ 305 (419)
T 3l5a_A 239 -APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQ-NT--------SRTPGDH---FGR 305 (419)
T ss_dssp -CCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGG-CB--------CCCSSTT---TTS
T ss_pred -cCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccc-cc--------cCCCCcc---ccH
Confidence 13478999999994 466788999999999 99999999986531100 00 0112221 123
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
..++.+++.+++++|||++|||.|+++|.++|+. ||+|+++|+++. +|+|+++++++..
T Consensus 306 ~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia-nPdlv~ki~~G~~ 364 (419)
T 3l5a_A 306 PVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT-EPDFVHKLAEQRP 364 (419)
T ss_dssp BHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH-CTTHHHHHHTTCG
T ss_pred HHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH-CcHHHHHHHcCCc
Confidence 4567888888767999999999999999999999 999999999986 7999999988754
No 19
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.90 E-value=3.5e-23 Score=208.31 Aligned_cols=221 Identities=20% Similarity=0.259 Sum_probs=162.1
Q ss_pred eeeCCcEEeCC--CCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHH
Q 012517 133 RKFSNPLGLAA--GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGA 210 (462)
Q Consensus 133 l~f~NPiglAA--G~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~ 210 (462)
++++|||.+|+ |+. +........+.|+|.+.++.+++.+. + ++++ ...+.+
T Consensus 1 ~~l~nri~~APM~~~t-~~~~r~~~~~~G~gli~te~~~~~~~-~--------------------~~~~---~~~~~l-- 53 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYT-DSAFRTLAFEWGADFAFSEMVSAKGF-L--------------------MNSQ---KTEELL-- 53 (318)
T ss_dssp ----CEEEECCCTTTC-SHHHHHHHHTTTCCCEECSCEEHHHH-H--------------------TTCH---HHHHHS--
T ss_pred CccCCCEEECCCCCCC-cHHHHHHHHHHCcCEEEeCCEEEccc-c--------------------cCCH---hHHHhh--
Confidence 47899999997 553 45555556778999999988775441 1 1111 001111
Q ss_pred hhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCC------C
Q 012517 211 QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTP------G 284 (462)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~------g 284 (462)
.. . ...++++||..+ +++ +|.++++++.+++|+|+||++||+++ |
T Consensus 54 -~~----~-------------------~~~~~~~QL~g~--~~~---~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G 104 (318)
T 1vhn_A 54 -PQ----P-------------------HERNVAVQIFGS--EPN---ELSEAARILSEKYKWIDLNAGCPVRKVVKEGAG 104 (318)
T ss_dssp -CC----T-------------------TCTTEEEEEECS--CHH---HHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCG
T ss_pred -hC----c-------------------CCCeEEEEeCCC--CHH---HHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcc
Confidence 00 0 123799999864 454 99999999987899999999999974 2
Q ss_pred cccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc
Q 012517 285 LRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV 364 (462)
Q Consensus 285 lr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~ 364 (462)
...+.+++.+.+++++|++++ ++||.||+++.++.++..++++.+.+.|+|+|++++.+.
T Consensus 105 ~~l~~~~~~~~eiv~~v~~~~---------~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~----------- 164 (318)
T 1vhn_A 105 GALLKDLRHFRYIVRELRKSV---------SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTV----------- 164 (318)
T ss_dssp GGGGSCHHHHHHHHHHHHHHC---------SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCT-----------
T ss_pred cchhhCHHHHHHHHHHHHHhh---------CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCc-----------
Confidence 222456689999999998763 589999999987766667999999999999999986541
Q ss_pred ccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH-hCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 365 AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR-AGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 365 ~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~-aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.++++|++.. +.++++++ ++|||++|||.|++|+.++++ .|||+||++|+++. +|+++.++++.+
T Consensus 165 ---~~~~~~~~~~----~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~-~P~l~~~~~~~~ 230 (318)
T 1vhn_A 165 ---VQSFTGRAEW----KALSVLEK----RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG-RPWIFKQIKDFL 230 (318)
T ss_dssp ---TTTTSSCCCG----GGGGGSCC----SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTT-CTTHHHHHHHHH
T ss_pred ---cccCCCCcCH----HHHHHHHc----CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHh-CcchHHHHHHHH
Confidence 1345565433 34445544 699999999999999999999 79999999999975 799999997744
No 20
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.90 E-value=5.1e-22 Score=203.61 Aligned_cols=273 Identities=15% Similarity=0.121 Sum_probs=184.9
Q ss_pred cEEEcCeeeCCcEEeCC--CC-C--CCH----HHHHHH-HcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA--GF-D--KNA----EAVEGL-LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G~-d--k~~----e~~~~l-~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
++++.+++|+|+|.+|+ +. . .++ ..++.+ .+.|+|.|+++.+.+.|+ |...|+...+.+|+ .+
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~-g~~~~~~~gi~~d~-~i----- 80 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPT-AKGYAWTPGIYTPE-QI----- 80 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGG-GCCSTTCCBSSSHH-HH-----
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeeccc-ccCCCCCCccCCHH-HH-----
Confidence 57899999999999997 33 1 232 222222 244799999998877653 33334333333332 23
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCC--CCcccCCCCCCCc-e--E---------E-EEec-CCCCCHHH---
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP--NDEVKAGGKAGPG-I--L---------G-VNIG-KNKTSEDA--- 255 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~~~p~~~~~~~~-~--l---------g-vnig-~nk~t~~~--- 255 (462)
+++..+++.+++...+..+ .|.++..... ....|.++|..+. . + + ..-. ...+|.++
T Consensus 81 --~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~ 158 (365)
T 2gou_A 81 --AGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQ 158 (365)
T ss_dssp --HHHHHHHHHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHH
T ss_pred --HHHHHHHHHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHH
Confidence 6788888888887654332 3333322110 0112333333221 0 0 0 0000 11245444
Q ss_pred -HHHHHHHHHHHcc-cCcEEEEecc---------CCCCCCcc------cccCc-hHHHHHHHHHHHHHHhhccCCCCCCC
Q 012517 256 -AADYVQGVHTLSQ-YADYLVINVS---------SPNTPGLR------MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPP 317 (462)
Q Consensus 256 -~~dy~~~~~~l~~-~aD~leiNvS---------sPnt~glr------~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~P 317 (462)
++||+++++++.+ .+|+||||.. ||+++ .| +++++ +++.+++++|++++ +.+ |
T Consensus 159 ~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N-~R~D~yGGslenr~r~~~eiv~avr~~v-------g~~-p 229 (365)
T 2gou_A 159 VIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEAN-NRSDEYGGSLENRLRFLDEVVAALVDAI-------GAE-R 229 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGC-CCCSTTSSSHHHHTHHHHHHHHHHHHHH-------CGG-G
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCcc-CcCcccCcchhhhHHHHHHHHHHHHHHc-------CCC-c
Confidence 5799999988876 5999999875 49886 33 24444 78889999999886 235 9
Q ss_pred EEEEecCCC---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHH
Q 012517 318 LLVKIAPDL---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388 (462)
Q Consensus 318 v~vKispdl---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~ 388 (462)
|.|||+++. +.++..++++.+++.|+|+|++++++... .+-. ..+.+++++
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~------------------~~~~--~~~~~~~i~ 289 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD------------------APDT--PVSFKRALR 289 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB------------------CCCC--CHHHHHHHH
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC------------------CCCc--cHHHHHHHH
Confidence 999999952 34578899999999999999999875310 0001 246788999
Q ss_pred HhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 389 LLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 389 ~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+ ++|||++||| ++++|.++|+.| ||+|+++|+++. +|+++++++++.
T Consensus 290 ~~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~-~P~l~~~~~~g~ 339 (365)
T 2gou_A 290 EAY--QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA-NPDLPERLRHGY 339 (365)
T ss_dssp HHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH-CTTHHHHHHHTC
T ss_pred HHC--CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh-CchHHHHHHcCC
Confidence 999 6999999999 999999999999 999999999987 599999998764
No 21
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.89 E-value=8.8e-23 Score=208.15 Aligned_cols=170 Identities=15% Similarity=0.228 Sum_probs=134.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHccc-CcEEEEeccCCCCC------CcccccCchHHHHHHHHHHHHHHhhccCCC
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQY-ADYLVINVSSPNTP------GLRMLQGRKQLKDLVKKVQAARDEMQWGEE 313 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD~leiNvSsPnt~------glr~lq~~~~l~~ll~aV~~~~~~~~~~~~ 313 (462)
++++||+.+ +++ +|.++++.+.++ +|.|+||++||+++ |...+.+++.+.+++++|++++
T Consensus 59 p~~vQL~g~--~p~---~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-------- 125 (350)
T 3b0p_A 59 PIALQLAGS--DPK---SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-------- 125 (350)
T ss_dssp SEEEEEECS--CHH---HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--------
T ss_pred eEEEEeCCC--CHH---HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--------
Confidence 799999865 454 888888888775 99999999999975 2223456689999999998763
Q ss_pred CCCCEEEEecCCCCh----hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCc---CccchHHHHHH
Q 012517 314 GPPPLLVKIAPDLSK----EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKP---LLSLSNNILKE 386 (462)
Q Consensus 314 ~~~Pv~vKispdl~~----~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~---l~~~al~~v~~ 386 (462)
++||.||+++..++ ++..++++.+.+.|+|+|+++..+. .+|++|+. ..+...+.+++
T Consensus 126 -~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~--------------~~g~~g~~~~~~~~~~~~~i~~ 190 (350)
T 3b0p_A 126 -RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSA--------------LLALSTKANREIPPLRHDWVHR 190 (350)
T ss_dssp -SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCB--------------C----------CCCCCHHHHHH
T ss_pred -CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCch--------------hcccCcccccCCCcccHHHHHH
Confidence 68999999876543 3678999999999999999986541 12555541 22446788999
Q ss_pred HHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 387 MYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 387 i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+++.++ ++|||++|||.|++|+.++++ |||+||++|+++. +|+++.++++.+
T Consensus 191 ik~~~~-~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~-~P~l~~~i~~~l 242 (350)
T 3b0p_A 191 LKGDFP-QLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYE-DPFVLEEADRRV 242 (350)
T ss_dssp HHHHCT-TSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHH-CGGGGTTHHHHT
T ss_pred HHHhCC-CCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHh-CcHHHHHHHHHh
Confidence 999885 699999999999999999998 9999999999975 799998887543
No 22
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.88 E-value=2e-21 Score=215.50 Aligned_cols=286 Identities=12% Similarity=0.086 Sum_probs=189.0
Q ss_pred cEEEcCeeeCCcEEeCCC---CC-----CCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCc
Q 012517 127 GLEVWGRKFSNPLGLAAG---FD-----KNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNS 198 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAAG---~d-----k~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn 198 (462)
|+++.+++|+|||.+|+. +. ...+.+..+++.|+|.|+++.+++.|+.....+.-..+.+|+ .+
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~-~~------- 83 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEG-DV------- 83 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHH-HH-------
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChH-Hh-------
Confidence 688999999999999984 21 112456667788999999999998875432211112232222 23
Q ss_pred hhHHHHHHHHHHhhccCcc--cccccCCCCCCC-cccCCCCCCCceEE-EEecCCCCCHHH----HHHHHHHHHHHcc-c
Q 012517 199 EGIVAVAKRLGAQHGKRKL--DETSRTSSSPND-EVKAGGKAGPGILG-VNIGKNKTSEDA----AADYVQGVHTLSQ-Y 269 (462)
Q Consensus 199 ~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~-~~p~~~~~~~~~lg-vnig~nk~t~~~----~~dy~~~~~~l~~-~ 269 (462)
+++..+++.+++...+... .|.++....... ..|.++|..+.... -.. ...+|.++ +++|+++++++.+ .
T Consensus 84 ~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~-p~~~t~~eI~~~i~~f~~aA~~a~~aG 162 (729)
T 1o94_A 84 RNLKAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSY-CKEMDLSDIAQVQQFYVDAAKRSRDAG 162 (729)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCB-CEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCC-CCcCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 5677777778765543322 333222111100 11222222110000 000 00234443 5799999999876 4
Q ss_pred CcEEEEeccC---------CCCCCc-----ccccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC-------CC
Q 012517 270 ADYLVINVSS---------PNTPGL-----RMLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD-------LS 327 (462)
Q Consensus 270 aD~leiNvSs---------Pnt~gl-----r~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd-------l~ 327 (462)
+|+||||.+| |++|-. .+++++ +++.+++++|++++ +.++||.+||||+ ++
T Consensus 163 fDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~v-------g~~~pv~vrls~~~~~~~~G~~ 235 (729)
T 1o94_A 163 FDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAV-------GSDCAIATRFGVDTVYGPGQIE 235 (729)
T ss_dssp CSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH-------TTTSEEEEEEEEECSSCTTSCC
T ss_pred CCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHh-------CCCceEEEEEccccCcCCCCCC
Confidence 9999999888 988621 235555 88999999999987 3579999999974 33
Q ss_pred -hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 328 -KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 328 -~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
.++..++++.+++ ++|.|.+++...........++ .+.++. ..+++++++++.+ ++|||++|||.++
T Consensus 236 ~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~------~~~~~~---~~~~~~~~i~~~~--~~pvi~~G~i~~~ 303 (729)
T 1o94_A 236 AEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPS------RFYQQG---HTIPWVKLVKQVS--KKPVLGVGRYTDP 303 (729)
T ss_dssp TTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCT------TTCCTT---TTHHHHHHHHTTC--SSCEECCSCCCCH
T ss_pred chHHHHHHHHHHHh-hcCEEEEeeecccccccccCCc------cccCcc---ccHHHHHHHHHHC--CCEEEEeCCCCCH
Confidence 4678889998887 7999998876421000000000 011111 1367888999998 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 407 EDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 407 ~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++|.++|+.| ||+|+++|+++. +|+|+++++++.
T Consensus 304 ~~a~~~l~~g~aD~V~~gR~~l~-~P~~~~~~~~g~ 338 (729)
T 1o94_A 304 EKMIEIVTKGYADIIGCARPSIA-DPFLPQKVEQGR 338 (729)
T ss_dssp HHHHHHHHTTSCSBEEESHHHHH-CTTHHHHHHTTC
T ss_pred HHHHHHHHCCCCCEEEeCchhhc-CchHHHHHHcCC
Confidence 9999999998 999999999987 799999998874
No 23
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.88 E-value=2.7e-21 Score=198.10 Aligned_cols=274 Identities=16% Similarity=0.162 Sum_probs=183.7
Q ss_pred cEEEcCeeeCCcEEeCC--CC---CCCH----HHHHH-HHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA--GF---DKNA----EAVEG-LLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G~---dk~~----e~~~~-l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
++++.+++|+|+|.+|+ +. +.++ ..++. ..+.|+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~-g~~~~~~~gi~~d~-~i----- 80 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQ-AKGYAGAPGLHSPE-QI----- 80 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSST-TCCSTTCCBSSSHH-HH-----
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEcccccccc-ccCCCCCcccCCHH-HH-----
Confidence 57899999999999997 33 2332 12222 2234899999998887663 43334433333332 23
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCCC---CcccCCCCCCCceEE------------EEec-CCCCCHHH---
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPN---DEVKAGGKAGPGILG------------VNIG-KNKTSEDA--- 255 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~---~~~p~~~~~~~~~lg------------vnig-~nk~t~~~--- 255 (462)
+++..+++.+++...+..+ .|.++...... ...|.++|..+.... ..-. ...+|.++
T Consensus 81 --~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~ 158 (364)
T 1vyr_A 81 --AAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPG 158 (364)
T ss_dssp --HHHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred --HHHHHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHH
Confidence 5788888888877654332 33333221100 011333333221100 0000 01234333
Q ss_pred -HHHHHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 256 -AADYVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 256 -~~dy~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
+++|+++++++.+ .+|+||||..| |+++-.. +++++ +++.+++++|++++ +.+ ||
T Consensus 159 ~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v-------g~~-~v 230 (364)
T 1vyr_A 159 IVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW-------SAD-RI 230 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS-------CGG-GE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc-------CCC-cE
Confidence 5799999988876 59999999875 9876221 24444 78899999999875 235 99
Q ss_pred EEEecCC--C--------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHH
Q 012517 319 LVKIAPD--L--------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388 (462)
Q Consensus 319 ~vKispd--l--------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~ 388 (462)
.|||+++ . +.++..++++.+++.|+|.|.+++++... + ++ ...+.+++++
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~--------------~---~~---~~~~~~~~v~ 290 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG--------------G---KP---YSEAFRQKVR 290 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB--------------C---CC---CCHHHHHHHH
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC--------------C---Cc---ccHHHHHHHH
Confidence 9999996 2 22467789999999999999999864210 0 11 1246788999
Q ss_pred HhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 389 LLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 389 ~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+ ++|||++||| ++++|.++|+.| ||+|+++|+++. +|+++++++++.
T Consensus 291 ~~~--~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~-~P~~~~~~~~g~ 340 (364)
T 1vyr_A 291 ERF--HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA-NPDLVARLQKKA 340 (364)
T ss_dssp HHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred HHC--CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh-ChhHHHHHHcCC
Confidence 999 7999999999 899999999998 999999999986 699999998753
No 24
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.88 E-value=4.1e-21 Score=199.17 Aligned_cols=283 Identities=15% Similarity=0.099 Sum_probs=188.0
Q ss_pred cEEEcCeeeCCcEEeCC--C-CCCC-------HHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA--G-FDKN-------AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G-~dk~-------~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
|+++.+++|+|+|.+|+ + ...+ .+.+..+++ |+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 21 P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~-G~GLIitE~~~v~~~-g~~~~~~~gi~~d~-~i----- 92 (402)
T 2hsa_B 21 PYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT-AGGFLITEGTMISPT-SAGFPHVPGIFTKE-QV----- 92 (402)
T ss_dssp CEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC-TTCEEECCCEESSTT-CCCSTTCCBCSSHH-HH-----
T ss_pred CeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc-cCCEEEecceeeccc-cccCCCCcccCCHH-HH-----
Confidence 68899999999999997 2 2111 223555665 599999999887763 44444444443332 23
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCC---CCcccCCCCCCCceE----------EEEec-CCCCCHHH----H
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP---NDEVKAGGKAGPGIL----------GVNIG-KNKTSEDA----A 256 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~---~~~~p~~~~~~~~~l----------gvnig-~nk~t~~~----~ 256 (462)
+|+..+++.+++...+..+ .|.++..... ....|.++|..+... ...-. ...+|.++ +
T Consensus 93 --~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii 170 (402)
T 2hsa_B 93 --REWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVV 170 (402)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHH
T ss_pred --HHHHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHH
Confidence 6788888888876654332 3333322110 011123333222110 00000 01234333 5
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccC---------CCCCCc-----ccccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSS---------PNTPGL-----RMLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSs---------Pnt~gl-----r~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
++|+++++++.+ .+|+||||..| |++|-. .+++++ +++.+++++|++++ +.+ ||.|
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~av-------g~~-~V~v 242 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAI-------GAD-RVGV 242 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-------CGG-GEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHh-------CCC-cEEE
Confidence 799999999876 59999999875 998722 135555 78899999999987 224 9999
Q ss_pred EecCCC---------ChhhHHHHHHHHHHcC------CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHH
Q 012517 321 KIAPDL---------SKEDLEDIAAVAVALR------LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILK 385 (462)
Q Consensus 321 Kispdl---------~~~~~~~ia~~~~~~G------vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~ 385 (462)
||+++. +.++..++++.+++.| +|.|.+++.+... ....+. +-++. +. ..++.++
T Consensus 243 Rls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~---~~~~~~----~~~~~-~~--~~~~~~~ 312 (402)
T 2hsa_B 243 RVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVA---YGQTEA----GRLGS-EE--EEARLMR 312 (402)
T ss_dssp EECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCT---TTTSSS----TTTTH-HH--HHHHHHH
T ss_pred EeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCcccc---ccCCcc----ccccC-Cc--chHHHHH
Confidence 999862 1256889999999999 9999999865321 000000 00110 00 1367888
Q ss_pred HHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 386 EMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 386 ~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++++.+ ++|||++||| ++++|.++|+.| ||+|+++|+++. +|+|+++++++.
T Consensus 313 ~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~-dP~l~~k~~~g~ 365 (402)
T 2hsa_B 313 TLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS-NPDLVMRIKLNA 365 (402)
T ss_dssp HHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred HHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh-CchHHHHHHhCC
Confidence 999999 7999999999 999999999998 999999999987 699999998763
No 25
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.88 E-value=6.7e-21 Score=209.19 Aligned_cols=282 Identities=12% Similarity=0.073 Sum_probs=193.8
Q ss_pred cEEEcCeeeCCcEEeCC--C-CCCC-------HHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA--G-FDKN-------AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G-~dk~-------~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
|+++.+++|+|+|.+|+ + +... .+.+..+++.|+|.|+++.+.+.|+ |...|+...+.+|+ .+
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~-~~~~~~~~~~~~~~-~~----- 80 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLT-GVGMEGGAMLNDAS-QI----- 80 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSST-TCSBTTCCBCCSGG-GH-----
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCcc-ccCCCCCCccCCHH-HH-----
Confidence 57899999999999998 2 4222 3456778888999999999887764 33334333333332 23
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHH----HHHHHHHHHHHcc-c
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDA----AADYVQGVHTLSQ-Y 269 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~----~~dy~~~~~~l~~-~ 269 (462)
+++..+.+.+++...+... .|.++.... ..|.++|..+.+..-.. ...+|.++ +++|+++++++.+ .
T Consensus 81 --~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~---~~~~~ps~~~~~~~~~~-p~~~t~~ei~~~i~~~~~aA~~a~~aG 154 (671)
T 1ps9_A 81 --PHHRTITEAVHQEGGKIALQILHTGRYSYQ---PHLVAPSALQAPINRFV-PHELSHEEILQLIDNFARCAQLAREAG 154 (671)
T ss_dssp --HHHHHHHHHHHHTTCCEEEEECCCGGGSBS---TTCEESSSCCCTTCSSC-CEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHhcCCEEEEEeccCCcccCC---CCCcCCCCcccccCCCC-CccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 6788888888876554322 332222110 11222222111000000 01245444 4799999998876 5
Q ss_pred CcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC------CCh
Q 012517 270 ADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD------LSK 328 (462)
Q Consensus 270 aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd------l~~ 328 (462)
+|+||||..| |+++-.. +++++ +++.+++++|++++ +.++||++||+|+ .+.
T Consensus 155 fd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~v-------G~~~~v~vrls~~~~~~~g~~~ 227 (671)
T 1ps9_A 155 YDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV-------GNDFIIIYRLSMLDLVEDGGTF 227 (671)
T ss_dssp CSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-------CSSSEEEEEEEEECCSTTCCCH
T ss_pred CCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHc-------CCCceEEEEECccccCCCCCCH
Confidence 9999998765 9886221 34444 78899999999886 4579999999973 455
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..++++.+++.|+|.|.+++.+.... .+. .....++. ..++.++++++.+ ++|||++|||.++++
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~--~~~------~~~~~~~~---~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~ 294 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEAR--IPT------IATPVPRG---AFSWVTRKLKGHV--SLPLVTTNRINDPQV 294 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCS--SCS------SSTTSCTT---TTHHHHHHHTTSC--SSCEEECSSCCSHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccc--ccc------ccccCCcc---hHHHHHHHHHHhc--CceEEEeCCCCCHHH
Confidence 6888999999999999999998653210 100 00111111 2357888999988 799999999999999
Q ss_pred HHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 409 AYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 409 A~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
|.++|+.| ||+|+++|+++. +|+++.++++++.
T Consensus 295 a~~~l~~g~aD~V~~gR~~l~-~P~l~~k~~~g~~ 328 (671)
T 1ps9_A 295 ADDILSRGDADMVSMARPFLA-DAELLSKAQSGRA 328 (671)
T ss_dssp HHHHHHTTSCSEEEESTHHHH-CTTHHHHHHTTCG
T ss_pred HHHHHHcCCCCEEEeCHHHHh-CcHHHHHHHcCCC
Confidence 99999999 999999999987 6999999998764
No 26
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.88 E-value=3.1e-21 Score=198.54 Aligned_cols=274 Identities=15% Similarity=0.089 Sum_probs=182.6
Q ss_pred cEEEcCeeeCCcEEeCC--CC-CCCH----HHHHH-HHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCc
Q 012517 127 GLEVWGRKFSNPLGLAA--GF-DKNA----EAVEG-LLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNS 198 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G~-dk~~----e~~~~-l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn 198 (462)
++++.+++|+|+|.+|+ +. ..++ ..++. ..+.|+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~-g~~~~~~~gi~~d~-~i------- 84 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPT-ARGYVYTPGIWTDA-QE------- 84 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGG-GCCBTTCCBSSSHH-HH-------
T ss_pred CeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccc-cccCCCCcccCCHH-HH-------
Confidence 68899999999999997 22 2222 12222 2234799999998887653 33333333333322 23
Q ss_pred hhHHHHHHHHHHhhccCcc--cccccCCCCCC---CcccCCCCCCCc---eE---------E-EEec-CCCCCHHH----
Q 012517 199 EGIVAVAKRLGAQHGKRKL--DETSRTSSSPN---DEVKAGGKAGPG---IL---------G-VNIG-KNKTSEDA---- 255 (462)
Q Consensus 199 ~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~---~~~p~~~~~~~~---~l---------g-vnig-~nk~t~~~---- 255 (462)
+++..+++.+++...+..+ .|.++...... ...|.++|..+. .+ + .... ...+|.++
T Consensus 85 ~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~ 164 (377)
T 2r14_A 85 AGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGI 164 (377)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHH
T ss_pred HHHHHHHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHH
Confidence 5788888888877654332 33333221110 011333333221 10 0 0000 01234333
Q ss_pred HHHHHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 256 AADYVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 256 ~~dy~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
+++|+++++++.+ .+|+||||..| |+++-.. +++++ +++.+++++|++++ +.+ ||.
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av-------g~~-~v~ 236 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF-------GPE-RVG 236 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-------CGG-GEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc-------CCC-cEE
Confidence 5799999988876 59999999876 9887221 34555 78899999999886 234 999
Q ss_pred EEecCCC---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh
Q 012517 320 VKIAPDL---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL 390 (462)
Q Consensus 320 vKispdl---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~ 390 (462)
|||+++. +.++..++++.+++.|+|.|.+++.+... ..++. .++.++++++.
T Consensus 237 vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--------------~~~~~-----~~~~~~~ik~~ 297 (377)
T 2r14_A 237 IRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIG--------------GDITY-----PEGFREQMRQR 297 (377)
T ss_dssp EEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------------------CC-----CTTHHHHHHHH
T ss_pred EEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccC--------------CCCcc-----hHHHHHHHHHH
Confidence 9999852 23578899999999999999999865210 00111 24678899999
Q ss_pred cCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHH
Q 012517 391 TRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAE 440 (462)
Q Consensus 391 ~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~ 440 (462)
+ ++|||++||| ++++|.++|+.| ||+|+++|+++. +|+++++++++
T Consensus 298 ~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~-~P~l~~k~~~g 344 (377)
T 2r14_A 298 F--KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA-NPDLPERFRLG 344 (377)
T ss_dssp C--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHT
T ss_pred C--CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh-CchHHHHHHcC
Confidence 9 7999999999 699999999998 999999999986 69999999875
No 27
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.88 E-value=2.9e-21 Score=197.50 Aligned_cols=265 Identities=15% Similarity=0.112 Sum_probs=186.1
Q ss_pred cEEEcCeeeCCcEEeCC---CC-CCCH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCC
Q 012517 127 GLEVWGRKFSNPLGLAA---GF-DKNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCG 195 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA---G~-dk~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G 195 (462)
|+++.+++|+|+|.+|+ +. +.++ +.+.++++ .|.|+++.+.+.|+ |...|+...+.+|+ .|
T Consensus 15 P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~--~GLIite~~~V~~~-g~~~~~~~gi~~d~-~i---- 86 (361)
T 3gka_A 15 PLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS--AGLIISEATSVTPQ-GVGYASTPGIWSPE-QV---- 86 (361)
T ss_dssp CEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT--SSEEEEEEEESSGG-GCCSTTCCBSSSHH-HH----
T ss_pred CeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh--CCEEEEcceeeccc-ccCCCCCCccCCHH-HH----
Confidence 68899999999999997 22 2343 23333444 79999998887764 55555555554443 44
Q ss_pred CCchhHHHHHHHHHHhhccCcc--cccccCCCCC--CCcccCCCCCCCceEE---------EEecCCCCCHH----HHHH
Q 012517 196 FNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP--NDEVKAGGKAGPGILG---------VNIGKNKTSED----AAAD 258 (462)
Q Consensus 196 ~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~~~p~~~~~~~~~lg---------vnig~nk~t~~----~~~d 258 (462)
+|+..+++.+++...+... .|.++..... ....|.++|..+..-. -... ..+|.+ .+++
T Consensus 87 ---~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~p-r~mt~~eI~~ii~~ 162 (361)
T 3gka_A 87 ---DGWRLVTDAVHAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTP-RALELDEIPGVVAA 162 (361)
T ss_dssp ---HHHHHHHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCC-EECCGGGHHHHHHH
T ss_pred ---HHHHHHHHHHHhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCC-ccCCHHHHHHHHHH
Confidence 8889999999987765432 3333321110 0111223332211100 0000 123433 3679
Q ss_pred HHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEe
Q 012517 259 YVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322 (462)
Q Consensus 259 y~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi 322 (462)
|+++++++.+ .+|+||||..| |++|... +++++ +++.+++++|++++ +.+ ||.|||
T Consensus 163 f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v-------g~~-~v~vRl 234 (361)
T 3gka_A 163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW-------SAA-RVGVHL 234 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH-------CGG-GEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc-------CCC-eEEEec
Confidence 9999999887 59999999887 9987321 35555 78999999999987 234 999999
Q ss_pred cCCC---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 323 APDL---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 323 spdl---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
+++. +.++..++++.+++.|+|.|.+++.+ +|+ +.++++++.+
T Consensus 235 s~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-------------------~~~-------~~~~~ik~~~-- 286 (361)
T 3gka_A 235 APRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-------------------GGD-------AIGQQLKAAF-- 286 (361)
T ss_dssp CTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-------------------STT-------CCHHHHHHHH--
T ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-------------------CCH-------HHHHHHHHHc--
Confidence 9952 13467899999999999999998753 111 2357888888
Q ss_pred CccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++|||++||| ++++|.++|+.| ||+|+++|+++. +|+|++++++++
T Consensus 287 ~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la-dPdl~~k~~~g~ 333 (361)
T 3gka_A 287 GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA-NPDLPRRFKLNA 333 (361)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh-CcHHHHHHHhCC
Confidence 6899999999 999999999998 999999999987 799999999875
No 28
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.87 E-value=2.4e-21 Score=199.43 Aligned_cols=271 Identities=15% Similarity=0.069 Sum_probs=186.4
Q ss_pred cEEEcCeeeCCcEEeCC---CC-C-CCHH-----HHHHH-HcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCC
Q 012517 127 GLEVWGRKFSNPLGLAA---GF-D-KNAE-----AVEGL-LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCG 195 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA---G~-d-k~~e-----~~~~l-~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G 195 (462)
|+++++++|+|+|.+|+ +. + .++. .++.. ...|+|.|+++.+.+.|. |...|+...+.+|+ .|
T Consensus 10 P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v~~~-g~~~~~~~gi~~d~-~i---- 83 (379)
T 3aty_A 10 PLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPN-YTGFLTEPGIYSDA-QI---- 83 (379)
T ss_dssp CEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEESSTT-CCSSSSCCBSSSHH-HH----
T ss_pred CeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceecccc-cccCCCCCCcCCHH-HH----
Confidence 68899999999999997 23 2 2332 22221 134899999998887764 44444444444333 44
Q ss_pred CCchhHHHHHHHHHHhhccCcc--cccccCCCC---C----CCccc-----CCCCCCCceE----------E--EE-ecC
Q 012517 196 FNSEGIVAVAKRLGAQHGKRKL--DETSRTSSS---P----NDEVK-----AGGKAGPGIL----------G--VN-IGK 248 (462)
Q Consensus 196 ~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~---~----~~~~p-----~~~~~~~~~l----------g--vn-ig~ 248 (462)
+|+..+++.+++...+..+ .|.++.... . ....| .++|..+... + .. ...
T Consensus 84 ---~~~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~p 160 (379)
T 3aty_A 84 ---EEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVP 160 (379)
T ss_dssp ---HHHHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCC
T ss_pred ---HHHHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCC
Confidence 8889999999987765432 344432211 0 01112 2333221100 0 00 000
Q ss_pred CCCCHHH-----HHHHHHHHHHHc-c-cCcEEEEecc---------CCCCCCcc--------cccCc-hHHHHHHHHHHH
Q 012517 249 NKTSEDA-----AADYVQGVHTLS-Q-YADYLVINVS---------SPNTPGLR--------MLQGR-KQLKDLVKKVQA 303 (462)
Q Consensus 249 nk~t~~~-----~~dy~~~~~~l~-~-~aD~leiNvS---------sPnt~glr--------~lq~~-~~l~~ll~aV~~ 303 (462)
..+|.++ +++|+++++++. + .+|+||||.. ||+++ .| +++++ +++.+++++|++
T Consensus 161 r~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N-~R~~D~yGG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 161 EELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSN-KRQSGPYAGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp EECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTC-CCCSSTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCC-ccccCCCCccChhhhHHHHHHHHHHHHH
Confidence 1234433 459999999987 6 5999999865 59986 44 56665 788999999998
Q ss_pred HHHhhccCCCCCCCEEEEecCCC---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCC
Q 012517 304 ARDEMQWGEEGPPPLLVKIAPDL---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374 (462)
Q Consensus 304 ~~~~~~~~~~~~~Pv~vKispdl---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~ 374 (462)
++ +.+ ||.|||+++. +.++..++++.+++.|+|.|.+++++... .+
T Consensus 240 av-------g~~-~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~----------------~~- 294 (379)
T 3aty_A 240 AV-------GSD-RVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN----------------QQ- 294 (379)
T ss_dssp HH-------CGG-GEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS----------------CC-
T ss_pred hc-------CCC-eEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC----------------CC-
Confidence 86 223 8999999953 33578899999999999999999864210 01
Q ss_pred cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+. + ++++++.+ ++|||++||| ++++|.++|+.| ||+|+++|+++. +|+|++++++++
T Consensus 295 --~~~--~-~~~ir~~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~-~P~l~~k~~~g~ 353 (379)
T 3aty_A 295 --IGD--V-VAWVRGSY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA-NPDLVERAQQNW 353 (379)
T ss_dssp --CCC--H-HHHHHTTC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred --ccH--H-HHHHHHHC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh-CcHHHHHHHcCC
Confidence 111 5 78899998 6999999999 999999999998 999999999987 699999998764
No 29
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.87 E-value=4.4e-21 Score=196.20 Aligned_cols=265 Identities=16% Similarity=0.119 Sum_probs=186.1
Q ss_pred cEEEcCeeeCCcEEeCC---CC-CCCH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCC
Q 012517 127 GLEVWGRKFSNPLGLAA---GF-DKNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCG 195 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA---G~-dk~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G 195 (462)
|+++.+++|+|+|.+|+ +. +.++ +.+..+++ +|.|+++.+.+.|. |...|+...+.+|+ .|
T Consensus 7 P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~--~GLIite~~~V~~~-g~~~~~~~gi~~d~-~i---- 78 (362)
T 4ab4_A 7 PIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS--AGLILSEATSVSPM-GVGYPDTPGIWNDE-QV---- 78 (362)
T ss_dssp CEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT--SSEEEEEEEESSGG-GCCSTTCCBCSSHH-HH----
T ss_pred CeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh--hCEEeeeeeEeccc-ccCCCCCCCcCCHH-HH----
Confidence 68899999999999997 22 2333 34444444 79999998877764 44455555554443 44
Q ss_pred CCchhHHHHHHHHHHhhccCcc--cccccCCCCC--CCcccCCCCCCCceEE---------EEecCCCCCHHH----HHH
Q 012517 196 FNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP--NDEVKAGGKAGPGILG---------VNIGKNKTSEDA----AAD 258 (462)
Q Consensus 196 ~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~--~~~~p~~~~~~~~~lg---------vnig~nk~t~~~----~~d 258 (462)
+|+..+++.+++...+..+ .|.++..... ....|.++|..+..-. -... ..+|.++ +++
T Consensus 79 ---~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~p-r~mt~~eI~~ii~~ 154 (362)
T 4ab4_A 79 ---RGWNNVTKAVHAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTP-RALETEEINDIVEA 154 (362)
T ss_dssp ---HHHHHHHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCC-EECCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCC-CcCCHHHHHHHHHH
Confidence 8899999999987765432 3333321110 0111223332211000 0000 1245444 579
Q ss_pred HHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEe
Q 012517 259 YVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322 (462)
Q Consensus 259 y~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi 322 (462)
|+++++++.+ .+|+||||..| |++|... +++++ +++.+++++|++++ +.+ ||.|||
T Consensus 155 f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~v-------g~~-~v~vRl 226 (362)
T 4ab4_A 155 YRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVW-------GAQ-RVGVHL 226 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-------CGG-GEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhc-------CCC-ceEEEe
Confidence 9999999877 59999999887 9987321 35555 78899999999987 234 999999
Q ss_pred cCCCC---------hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 323 APDLS---------KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 323 spdl~---------~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
+++.. .++..++++.+++.|+|.|.+++.+ +|+ ..++++++.+
T Consensus 227 s~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-------------------~~~-------~~~~~ik~~~-- 278 (362)
T 4ab4_A 227 APRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-------------------ADD-------SIGPLIKEAF-- 278 (362)
T ss_dssp CTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-------------------CTT-------CCHHHHHHHH--
T ss_pred eccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-------------------CCH-------HHHHHHHHHC--
Confidence 98621 3467899999999999999998753 111 2357888888
Q ss_pred CccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++|||++||| ++++|.++|+.| ||+|+++|+++. +|+|++++++++
T Consensus 279 ~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la-nPdl~~k~~~g~ 325 (362)
T 4ab4_A 279 GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA-NPDLPARLAADA 325 (362)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHTTC
T ss_pred CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh-CcHHHHHHHcCC
Confidence 6899999999 999999999998 999999999987 799999999875
No 30
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.87 E-value=4.8e-21 Score=211.04 Aligned_cols=283 Identities=14% Similarity=0.133 Sum_probs=191.9
Q ss_pred cEEEcCeeeCCcEEeCCC---CC-CCHH----HHHHHHcCCccEEEecccccCCCCCCCCCce-eeecCCCcccccCCCC
Q 012517 127 GLEVWGRKFSNPLGLAAG---FD-KNAE----AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRI-FRLRQEGAIINRCGFN 197 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAAG---~d-k~~e----~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~-frl~~d~a~iN~~G~n 197 (462)
|+++.+++|+|+|.+|+- .+ .+.+ ....+++.|+|.|+++.+.+.|. |...|+. ..+.+|+ .+
T Consensus 17 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~-~~~~~~~~~~~~~~~-~~------ 88 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHAT-SDIAPFIELRIWDDQ-DL------ 88 (690)
T ss_dssp CCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGG-GCCTTSCCEECSSGG-GH------
T ss_pred CeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccc-cccCCCcCCccCCHH-HH------
Confidence 578999999999999982 11 1222 33446788999999998888764 4443432 3444433 44
Q ss_pred chhHHHHHHHHHHhhccCcc--cccccCCCCCC-CcccCCCCCCCceE--E-EEecCCCCCHHH----HHHHHHHHHHHc
Q 012517 198 SEGIVAVAKRLGAQHGKRKL--DETSRTSSSPN-DEVKAGGKAGPGIL--G-VNIGKNKTSEDA----AADYVQGVHTLS 267 (462)
Q Consensus 198 n~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~-~~~p~~~~~~~~~l--g-vnig~nk~t~~~----~~dy~~~~~~l~ 267 (462)
+|+..+++.+++...+... .|.++...... ...|.++|..+... . -... ..+|.++ +++|+++++++.
T Consensus 89 -~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p-~~~t~~ei~~~i~~f~~aA~~a~ 166 (690)
T 3k30_A 89 -PALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQA-RAMTKQDIDDLRRWHRNAVRRSI 166 (690)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBC-EECCHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCC-CcCCHHHHHHHHHHHHHHHHHHH
Confidence 7889999999886654332 33333221111 11122233221100 0 0000 1234443 579999999988
Q ss_pred c-cCcEEEE----------eccCCCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC-----
Q 012517 268 Q-YADYLVI----------NVSSPNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD----- 325 (462)
Q Consensus 268 ~-~aD~lei----------NvSsPnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd----- 325 (462)
+ .+|.||| ||.||++|-.. +++++ +++.+++++|++++ +.++||.+|||++
T Consensus 167 ~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~-------g~~~~v~~r~s~~~~~~~ 239 (690)
T 3k30_A 167 EAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDEC-------AGRAAVACRITVEEEIDG 239 (690)
T ss_dssp HHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH-------TTSSEEEEEEECCCCSTT
T ss_pred HcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHh-------CCCceEEEEECccccCCC
Confidence 7 5999999 67788887221 35565 78999999999987 3578999999987
Q ss_pred -CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCC
Q 012517 326 -LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGIS 404 (462)
Q Consensus 326 -l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~ 404 (462)
++.++..++++.+++ ++|.|.++..+..... . ++. +.++ ...++.++++++.+ ++|||++|||+
T Consensus 240 g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~-~--~~~------~~~~---~~~~~~~~~i~~~~--~~pvi~~G~i~ 304 (690)
T 3k30_A 240 GITREDIEGVLRELGE-LPDLWDFAMGSWEGDS-V--TSR------FAPE---GRQEEFVAGLKKLT--TKPVVGVGRFT 304 (690)
T ss_dssp SCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHT-C--CTT------TCCT---TTTHHHHTTSGGGC--SSCEEECSCCC
T ss_pred CCCHHHHHHHHHHHHh-hcCEEEEecccccccC-C--CCc------cCCc---cccHHHHHHHHHHc--CCeEEEeCCCC
Confidence 345688899999988 8999999865422100 0 000 0011 11356788889988 79999999999
Q ss_pred CHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 405 SGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 405 s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
++++|.++|+.| ||+|+++++++. +|+|+++++++..
T Consensus 305 ~~~~a~~~l~~g~~d~v~~gR~~~~-~P~~~~~~~~g~~ 342 (690)
T 3k30_A 305 SPDAMVRQIKAGILDLIGAARPSIA-DPFLPNKIRDGRL 342 (690)
T ss_dssp CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHTTCG
T ss_pred CHHHHHHHHHCCCcceEEEcHHhHh-CccHHHHHHcCCc
Confidence 999999999998 999999999987 7999999988753
No 31
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.86 E-value=5.8e-21 Score=196.48 Aligned_cols=275 Identities=13% Similarity=0.026 Sum_probs=181.4
Q ss_pred cEEEcCeeeCCcEEeCC--CC-CCCH-------HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 127 GLEVWGRKFSNPLGLAA--GF-DKNA-------EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA--G~-dk~~-------e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
|+++.+++|+|+|.+|+ +. ..++ +.+..+++ |+|.|+++.+.+.|. |...|+...+.+|+ .+
T Consensus 19 P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~-g~GLiite~~~v~~~-g~~~~~~~gi~~d~-~i----- 90 (376)
T 1icp_A 19 PCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRST-NGGLLIGEATVISET-GIGYKDVPGIWTKE-QV----- 90 (376)
T ss_dssp CEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC-TTCEEECCCEECSGG-GCCSTTCCBCSSHH-HH-----
T ss_pred CeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcC-CeeEEEECceeeccc-cccCcccCccCCHH-HH-----
Confidence 58899999999999997 32 2112 23455555 799999998887663 33333333333222 22
Q ss_pred CchhHHHHHHHHHHhhccCcc--cccccCCCCCC---CcccCCCCCCCceEE--------EEec-CCCCCHH----HHHH
Q 012517 197 NSEGIVAVAKRLGAQHGKRKL--DETSRTSSSPN---DEVKAGGKAGPGILG--------VNIG-KNKTSED----AAAD 258 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~---~~~p~~~~~~~~~lg--------vnig-~nk~t~~----~~~d 258 (462)
+++..+++.+++...+..+ .|.++...... ...|.++|..+.... ..-. ...+|.+ .+++
T Consensus 91 --~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~ 168 (376)
T 1icp_A 91 --EAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNE 168 (376)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHH
T ss_pred --HHHHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHH
Confidence 5778888888876654332 33333221110 011333332221100 0000 0012322 3579
Q ss_pred HHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEe
Q 012517 259 YVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322 (462)
Q Consensus 259 y~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi 322 (462)
|+++++++.+ .+|+||||..| |+++-.. +++++ +++.+++++|++++ +.+ ||.|||
T Consensus 169 f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av-------g~~-~V~vrl 240 (376)
T 1icp_A 169 FRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI-------GSD-RVGIRI 240 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-------CGG-GEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHh-------cCC-ceEEEe
Confidence 9999999876 59999999875 9887222 24555 78899999999887 235 999999
Q ss_pred cCCC---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 323 APDL---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 323 spdl---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
+++. +.++..++++.+++.|+|.|.+++.+.... . ++. ...+.++++++.+
T Consensus 241 s~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~-----~---------~~~----~~~~~~~~vr~~~-- 300 (376)
T 1icp_A 241 SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA-----W---------EKI----ECTESLVPMRKAY-- 300 (376)
T ss_dssp CTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------------------------CCCCSHHHHHHC--
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC-----C---------Ccc----ccHHHHHHHHHHc--
Confidence 9852 223578999999999999999998653110 0 000 0123457888888
Q ss_pred CccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++|||++||| ++++|.++|+.| ||+|+++|+++. +|+|+++++++.
T Consensus 301 ~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~-~P~l~~k~~~g~ 347 (376)
T 1icp_A 301 KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS-NPDLPKRFELNA 347 (376)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh-CccHHHHHHcCC
Confidence 6999999999 899999999998 999999999987 699999998753
No 32
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.84 E-value=4.5e-19 Score=180.08 Aligned_cols=288 Identities=18% Similarity=0.208 Sum_probs=178.9
Q ss_pred ChHHHHHHHHHHHh-cCCCCCC-CCCCCCCccEEEcCeeeCCcEEeCC-CC----CCCHH--HHHHHHcCCccEEEeccc
Q 012517 98 DAEVAHTLAVSAAA-RGWVPRE-KRPDPAILGLEVWGRKFSNPLGLAA-GF----DKNAE--AVEGLLGLGFGFVEVGSV 168 (462)
Q Consensus 98 d~E~aH~~~~~~l~-~~~~p~~-~~~~~~~L~v~v~Gl~f~NPiglAA-G~----dk~~e--~~~~l~~lGfG~Vevgtv 168 (462)
+-|..++--..+++ ..+.|+- +....++++++++|.+++-||++|+ |+ ..+|| ..++..+.|.-++. .|.
T Consensus 29 ~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~l-St~ 107 (352)
T 3sgz_A 29 DDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVI-SSY 107 (352)
T ss_dssp TTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEE-CTT
T ss_pred cchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEe-CCC
Confidence 56666666666666 4678874 4567789999999999999999997 42 56776 34446677766654 332
Q ss_pred c---cCC--CCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEE
Q 012517 169 T---PVP--QEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILG 243 (462)
Q Consensus 169 T---~~p--q~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lg 243 (462)
. ++. +.+...|+.|.+.-.. +..-.+.+.+|.++...+ -+.
T Consensus 108 ss~s~e~v~~~~~~~~~wfQlY~~~--------d~~~~~~l~~ra~~aG~~--------------------------alv 153 (352)
T 3sgz_A 108 ASYSLEDIVAAAPEGFRWFQLYMKS--------DWDFNKQMVQRAEALGFK--------------------------ALV 153 (352)
T ss_dssp CSSCHHHHHHHSTTCEEEEECCCCS--------CHHHHHHHHHHHHHTTCC--------------------------CEE
T ss_pred CCCCHHHHHHhccCccceeccccCC--------CHHHHHHHHHHHHHcCCC--------------------------EEE
Confidence 2 211 1111246677652100 001123334443332110 133
Q ss_pred EEecCC--CCCHHHHHHHHHHHH-----HHcccCcEEEEeccCCCCCCc-ccccCchHHHHHHHHHHHHHHhhccCCCCC
Q 012517 244 VNIGKN--KTSEDAAADYVQGVH-----TLSQYADYLVINVSSPNTPGL-RMLQGRKQLKDLVKKVQAARDEMQWGEEGP 315 (462)
Q Consensus 244 vnig~n--k~t~~~~~dy~~~~~-----~l~~~aD~leiNvSsPnt~gl-r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~ 315 (462)
+-+-.. ..-+. |....+. .+..+.+... .....+. +...++...-+.++++++. .+
T Consensus 154 lTvD~p~~g~R~~---d~r~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~w~~i~~lr~~---------~~ 217 (352)
T 3sgz_A 154 ITIDTPVLGNRRR---DKRNQLNLEANILKAALRALKE----EKPTQSVPVLFPKASFCWNDLSLLQSI---------TR 217 (352)
T ss_dssp EECSCSSCCCCHH---HHHHHHHSCHHHHTTCC-------------------CCCTTCCHHHHHHHHHH---------CC
T ss_pred EEeCCCCCCcchh---hhhcCCCCCcccchhhhccccc----ccccchhhhhccCCCCCHHHHHHHHHh---------cC
Confidence 333110 00122 2222221 0111111110 0000000 0122333444667888765 37
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
.||+||...+ .+.++.+.++|+|+|+++|+. ++. ..| | +.+++.+.++++.+++++
T Consensus 218 ~PvivK~v~~------~e~A~~a~~~GaD~I~vsn~G-G~~----------~d~---~----~~~~~~L~~i~~av~~~i 273 (352)
T 3sgz_A 218 LPIILKGILT------KEDAELAMKHNVQGIVVSNHG-GRQ----------LDE---V----SASIDALREVVAAVKGKI 273 (352)
T ss_dssp SCEEEEEECS------HHHHHHHHHTTCSEEEECCGG-GTS----------SCS---S----CCHHHHHHHHHHHHTTSS
T ss_pred CCEEEEecCc------HHHHHHHHHcCCCEEEEeCCC-CCc----------cCC---C----ccHHHHHHHHHHHhCCCC
Confidence 8999998743 355888999999999999974 221 112 2 247789999999887789
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh----cCC----ChHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY----GGP----ALIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~----~GP----~~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
|||++|||.+++|+.++|.+||++||++|+++| .|+ .+++.++++|+.+|...|+++++|+.+..
T Consensus 274 pVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~ 346 (352)
T 3sgz_A 274 EVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDL 346 (352)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGG
T ss_pred eEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhc
Confidence 999999999999999999999999999999997 344 37889999999999999999999998753
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.84 E-value=4.3e-19 Score=181.99 Aligned_cols=254 Identities=17% Similarity=0.237 Sum_probs=175.8
Q ss_pred CCCCCC-CCCCCCCccEEEcCeeeCCcEEeC--C--CC-CCCHH--HHHHHHcCCccEEEecccccCCCCCCCCCceeee
Q 012517 113 GWVPRE-KRPDPAILGLEVWGRKFSNPLGLA--A--GF-DKNAE--AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRL 184 (462)
Q Consensus 113 ~~~p~~-~~~~~~~L~v~v~Gl~f~NPiglA--A--G~-dk~~e--~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl 184 (462)
.+.|+- +..++.+++++++|.++++||++| | |+ +.++| ..+.+.+.|.++++ ++...
T Consensus 56 ~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~-s~~~s-------------- 120 (368)
T 2nli_A 56 LLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSI-SAYSG-------------- 120 (368)
T ss_dssp EECCCCCCCCSCCCCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEE-CTTCS--------------
T ss_pred eeeccccCCCccCCcceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEe-echHh--------------
Confidence 345653 355678999999999999999999 4 53 56665 33445678887763 34321
Q ss_pred cCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHH
Q 012517 185 RQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVH 264 (462)
Q Consensus 185 ~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~ 264 (462)
..++.+.+ ... ..++.+||-.++ .++...+.++.++
T Consensus 121 --------------~~le~v~~----~~~-------------------------~~~~~~QLy~~~-d~~~~~~~~~ra~ 156 (368)
T 2nli_A 121 --------------ATFEEISE----GLN-------------------------GGPRWFQIYMAK-DDQQNRDILDEAK 156 (368)
T ss_dssp --------------SCHHHHHH----HHT-------------------------TCCEEEEECCBS-SHHHHHHHHHHHH
T ss_pred --------------HHHHHHHH----hCC-------------------------CCCEEEEEeccC-CHHHHHHHHHHHH
Confidence 11222211 100 125778885422 3444445555555
Q ss_pred HHcccCcEEEEeccCCCCCC-----------------c----------ccc------cCchHHHHHHHHHHHHHHhhccC
Q 012517 265 TLSQYADYLVINVSSPNTPG-----------------L----------RML------QGRKQLKDLVKKVQAARDEMQWG 311 (462)
Q Consensus 265 ~l~~~aD~leiNvSsPnt~g-----------------l----------r~l------q~~~~l~~ll~aV~~~~~~~~~~ 311 (462)
.++ +|.++||+.||-... . ..+ .+++...+.+++|++.
T Consensus 157 ~aG--~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~------- 227 (368)
T 2nli_A 157 SDG--ATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGH------- 227 (368)
T ss_dssp HTT--CSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHH-------
T ss_pred HCC--CCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHH-------
Confidence 544 899999999986210 0 000 1233445667777765
Q ss_pred CCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 312 EEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 312 ~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.+.||+||.. .+ .+.++.+.++|+|+|+++|+. +|. ..+ |+ .+++.+.++++.+
T Consensus 228 --~~~PvivK~v--~~----~e~a~~a~~~Gad~I~vs~~g-gr~----------~~~---g~----~~~~~l~~v~~~v 281 (368)
T 2nli_A 228 --SGLPVFVKGI--QH----PEDADMAIKRGASGIWVSNHG-ARQ----------LYE---AP----GSFDTLPAIAERV 281 (368)
T ss_dssp --SSSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCGG-GTS----------CSS---CC----CHHHHHHHHHHHH
T ss_pred --cCCCEEEEcC--CC----HHHHHHHHHcCCCEEEEcCCC-cCC----------CCC---CC----ChHHHHHHHHHHh
Confidence 3689999964 22 456888999999999999974 221 111 22 2678889999988
Q ss_pred CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc----CC----ChHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 392 RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG----GP----ALIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 392 ~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~----GP----~~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
++++|||++|||.+++|+.++|.+|||+|+++|++++. |. ..++.++++|+..|...|++++.|+++..
T Consensus 282 ~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 358 (368)
T 2nli_A 282 NKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLD 358 (368)
T ss_dssp TTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCC
T ss_pred CCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhcccc
Confidence 77899999999999999999999999999999999874 33 46788899999999999999999998753
No 34
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.83 E-value=5e-20 Score=186.36 Aligned_cols=259 Identities=24% Similarity=0.310 Sum_probs=165.1
Q ss_pred CCCCccEEEcCeeeCCcEEeCC--CCCCCHH-----HHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccC
Q 012517 122 DPAILGLEVWGRKFSNPLGLAA--GFDKNAE-----AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRC 194 (462)
Q Consensus 122 ~~~~L~v~v~Gl~f~NPiglAA--G~dk~~e-----~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~ 194 (462)
++.+++++++|.++++||++|+ |....++ ....+.+.|.+++ +++...... ++
T Consensus 44 ~~~d~~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~-~~~~~~~le--~~----------------- 103 (332)
T 1vcf_A 44 SEVDLTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMM-LGSGRILLE--RP----------------- 103 (332)
T ss_dssp GGCCCCEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEE-EEECHHHHH--CT-----------------
T ss_pred CCCCcceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEE-eCCchhccc--CC-----------------
Confidence 4678999999999999999997 3344443 3344667787654 343321100 00
Q ss_pred CCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCC---CCCHHHHHHHHHHHHHHcccCc
Q 012517 195 GFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKN---KTSEDAAADYVQGVHTLSQYAD 271 (462)
Q Consensus 195 G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~n---k~t~~~~~dy~~~~~~l~~~aD 271 (462)
+.+.+.+ ++.. + .+.|+..|++.. ..+++ .+.++++.+. +|
T Consensus 104 -----~~~~~~q-l~~~----------------~---------~d~pv~~~~~~~q~~~~~~~---~~~~a~~~~~--~~ 147 (332)
T 1vcf_A 104 -----EALRSFR-VRKV----------------A---------PKALLIANLGLAQLRRYGRD---DLLRLVEMLE--AD 147 (332)
T ss_dssp -----TTHHHHC-CTTT----------------C---------SSSCEEEEEEGGGGGTCCHH---HHHHHHHHHT--CS
T ss_pred -----CccceEE-eecc----------------C---------CCceeecccChhhhhccChH---HHHHHHhhcC--CC
Confidence 0111111 1000 0 023677777631 12344 5555566554 78
Q ss_pred EEEEeccCCCC---CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE-ecCCCChhhHHHHHHHHHHcCCcEEE
Q 012517 272 YLVINVSSPNT---PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK-IAPDLSKEDLEDIAAVAVALRLDGLI 347 (462)
Q Consensus 272 ~leiNvSsPnt---~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK-ispdl~~~~~~~ia~~~~~~GvdgIi 347 (462)
.+++|+.+... .+.+++ +.+.+++++|++ . ++||+|| ++++++.+ .++.+.++|+|+|+
T Consensus 148 a~~i~~n~~~~~~~~~~~~~---~~~~~~i~~vr~-~---------~~Pv~vK~v~~g~~~e----~a~~~~~~G~d~I~ 210 (332)
T 1vcf_A 148 ALAFHVNPLQEAVQRGDTDF---RGLVERLAELLP-L---------PFPVMVKEVGHGLSRE----AALALRDLPLAAVD 210 (332)
T ss_dssp EEEEECCHHHHHHTTSCCCC---TTHHHHHHHHCS-C---------SSCEEEECSSSCCCHH----HHHHHTTSCCSEEE
T ss_pred ceeeccchHHHHhcCCCccH---HHHHHHHHHHHc-C---------CCCEEEEecCCCCCHH----HHHHHHHcCCCEEE
Confidence 88887643110 111111 124556666653 2 6899999 77766643 47788999999999
Q ss_pred EecCCcc--------CCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCE
Q 012517 348 ISNTTIS--------RPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATL 419 (462)
Q Consensus 348 vsNTt~~--------r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~ 419 (462)
++|+... |......... ...+ |.+ ..+.+.++++.++ ++|||++|||.+++|+.++|.+|||+
T Consensus 211 vs~~ggt~~~~~~~~r~~~~~~~~~-~~~~---g~~----~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~ 281 (332)
T 1vcf_A 211 VAGAGGTSWARVEEWVRFGEVRHPE-LCEI---GIP----TARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADL 281 (332)
T ss_dssp CCCBTSCCHHHHHHTC--------C-CTTC---SCB----HHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSE
T ss_pred eCCCCCCcchhHHHhhccccchhhh-Hhhc---ccc----HHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCCh
Confidence 9986321 1100000000 0112 222 5678899999886 69999999999999999999999999
Q ss_pred EEEchhhhh---cCC----ChHHHHHHHHHHHHHHcCCCCHHHhhcccCC
Q 012517 420 VQLYTAFAY---GGP----ALIPQIKAELAECLERDGFKSIIEAVGADYR 462 (462)
Q Consensus 420 Vqv~Tali~---~GP----~~i~~i~~~L~~~l~~~G~~si~e~~G~~~~ 462 (462)
||++|++++ .|+ .+++.++++|+.+|...|++|++|+++..+|
T Consensus 282 V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~ 331 (332)
T 1vcf_A 282 LAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGARNPKEARGRVER 331 (332)
T ss_dssp EEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCEEE
T ss_pred HhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhhcc
Confidence 999999994 555 6788999999999999999999999987654
No 35
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.83 E-value=5.3e-19 Score=182.71 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=180.1
Q ss_pred ChHHHHHHHHHHHh-cCCCCCC-CCCCCCCccEEEcCeeeCCcEEeCC-CC----CCCHH--HHHHHHcCCccEEEeccc
Q 012517 98 DAEVAHTLAVSAAA-RGWVPRE-KRPDPAILGLEVWGRKFSNPLGLAA-GF----DKNAE--AVEGLLGLGFGFVEVGSV 168 (462)
Q Consensus 98 d~E~aH~~~~~~l~-~~~~p~~-~~~~~~~L~v~v~Gl~f~NPiglAA-G~----dk~~e--~~~~l~~lGfG~Vevgtv 168 (462)
+-|...+--..++. ..+.|+- +..++.+++++++|.++++||++|+ |+ ..++| ..+.+.+.|.+++.. +.
T Consensus 54 ~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s-~~ 132 (392)
T 2nzl_A 54 NDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLS-SW 132 (392)
T ss_dssp TTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEEC-TT
T ss_pred CccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeecc-ch
Confidence 33444444444444 3567764 4556789999999999999999998 53 24454 444466778776643 32
Q ss_pred ccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecC
Q 012517 169 TPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGK 248 (462)
Q Consensus 169 T~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~ 248 (462)
.. ..++.+. +... ..++.+|+-.
T Consensus 133 ~s----------------------------~~le~v~----~~~~-------------------------~~~~~~QLy~ 155 (392)
T 2nzl_A 133 AT----------------------------SSIEEVA----EAGP-------------------------EALRWLQLYI 155 (392)
T ss_dssp CS----------------------------SCHHHHH----HHCT-------------------------TSEEEEEECC
T ss_pred HH----------------------------HHHHHHH----HhcC-------------------------CCcEEEEEEe
Confidence 21 1122221 1100 1367888844
Q ss_pred CCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcc-----------------cc----------------c------
Q 012517 249 NKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLR-----------------ML----------------Q------ 289 (462)
Q Consensus 249 nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr-----------------~l----------------q------ 289 (462)
++ .++...+.++.++.++ ++++.||+.||-. |.| .+ +
T Consensus 156 ~~-d~~~~~~~~~ra~~~G--~~al~itvd~p~~-g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~ 231 (392)
T 2nzl_A 156 YK-DREVTKKLVRQAEKMG--YKAIFVTVDTPYL-GNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYV 231 (392)
T ss_dssp BS-SHHHHHHHHHHHHHTT--CCCEEEECSCSSC-CCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHH
T ss_pred cC-CHHHHHHHHHHHHHCC--CCEEEEeCCCCCc-cchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHH
Confidence 22 3444455655555544 8999999999864 111 00 0
Q ss_pred ----CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc
Q 012517 290 ----GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA 365 (462)
Q Consensus 290 ----~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~ 365 (462)
+++...+.+++|++. .+.||+||... + .+.++.+.++|+|+|+++|+.. |.
T Consensus 232 ~~~~d~~~~~~~i~~lr~~---------~~~PvivKgv~--~----~e~A~~a~~aGad~I~vs~~gg-r~--------- 286 (392)
T 2nzl_A 232 AKAIDPSISWEDIKWLRRL---------TSLPIVAKGIL--R----GDDAREAVKHGLNGILVSNHGA-RQ--------- 286 (392)
T ss_dssp HHHBCTTCCHHHHHHHC-----------CCSCEEEEEEC--C----HHHHHHHHHTTCCEEEECCGGG-TS---------
T ss_pred hhcCChHHHHHHHHHHHHh---------hCCCEEEEecC--C----HHHHHHHHHcCCCEEEeCCCCC-Cc---------
Confidence 222233445555443 36899999752 2 3558899999999999998752 21
Q ss_pred cccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc----CC----ChHHHH
Q 012517 366 KETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG----GP----ALIPQI 437 (462)
Q Consensus 366 ~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~----GP----~~i~~i 437 (462)
..+ |+ ..++.+.++++.+++++|||++|||.+++|+.++|.+|||+|+++|++++. |. .+++.+
T Consensus 287 -~~~---g~----~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l 358 (392)
T 2nzl_A 287 -LDG---VP----ATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEIL 358 (392)
T ss_dssp -STT---CC----CHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCC---Cc----ChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHH
Confidence 112 22 367888999998877899999999999999999999999999999999873 11 367889
Q ss_pred HHHHHHHHHHcCCCCHHHhhccc
Q 012517 438 KAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 438 ~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
+++|+.+|...|++++.|+++..
T Consensus 359 ~~el~~~m~~~G~~~i~el~~~~ 381 (392)
T 2nzl_A 359 KEEFRLAMALSGCQNVKVIDKTL 381 (392)
T ss_dssp HHHHHHHHHHHTCSBGGGCCGGG
T ss_pred HHHHHHHHHHhCCCcHHHHhhhh
Confidence 99999999999999999998754
No 36
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.82 E-value=3.5e-18 Score=182.06 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=172.3
Q ss_pred CCCCC-CCCCCCCccEEEcCeeeCCcEEeCC-C----CCC-CHH--HHHHHHc--CCccEEEecccccCCCCCCCCCcee
Q 012517 114 WVPRE-KRPDPAILGLEVWGRKFSNPLGLAA-G----FDK-NAE--AVEGLLG--LGFGFVEVGSVTPVPQEGNPKPRIF 182 (462)
Q Consensus 114 ~~p~~-~~~~~~~L~v~v~Gl~f~NPiglAA-G----~dk-~~e--~~~~l~~--lGfG~VevgtvT~~pq~GNp~PR~f 182 (462)
|.|+- ...++.+++++++|.++++||++|+ + ... +++ ..+.+.+ .|.++++ .+...
T Consensus 166 l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~-s~~a~------------ 232 (511)
T 1kbi_A 166 FKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMI-STLAS------------ 232 (511)
T ss_dssp ECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEE-CTTCS------------
T ss_pred cccccccCcccccCccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEe-CCccc------------
Confidence 45653 3556789999999999999999997 3 233 454 4444666 7877765 22110
Q ss_pred eecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHH
Q 012517 183 RLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQG 262 (462)
Q Consensus 183 rl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~ 262 (462)
..++.+.+ .... ...+..+||.-++ .++..++.++.
T Consensus 233 ----------------~s~e~v~~----~~~~-----------------------~~~~~~~QLy~~~-d~~~~~~~~~r 268 (511)
T 1kbi_A 233 ----------------CSPEEIIE----AAPS-----------------------DKQIQWYQLYVNS-DRKITDDLVKN 268 (511)
T ss_dssp ----------------SCHHHHHH----TCCC-----------------------SSCCEEEEECCCS-SHHHHHHHHHH
T ss_pred ----------------CCHHHHHh----hcCC-----------------------CCCCeEEEEeecC-CHHHHHHHHHH
Confidence 11222211 1000 0125667774321 34555566666
Q ss_pred HHHHcccCcEEEEeccCCCCC---------------------C-----ccc----c---cCchHHHHHHHHHHHHHHhhc
Q 012517 263 VHTLSQYADYLVINVSSPNTP---------------------G-----LRM----L---QGRKQLKDLVKKVQAARDEMQ 309 (462)
Q Consensus 263 ~~~l~~~aD~leiNvSsPnt~---------------------g-----lr~----l---q~~~~l~~ll~aV~~~~~~~~ 309 (462)
++.++ +|+|+|++.||... | ... + .+++...+.+++|++.
T Consensus 269 ae~aG--~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~----- 341 (511)
T 1kbi_A 269 VEKLG--VKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKK----- 341 (511)
T ss_dssp HHHHT--CSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHH-----
T ss_pred HHHcC--CCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHH-----
Confidence 66655 89999998888611 0 000 1 2233335667888765
Q ss_pred cCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHH
Q 012517 310 WGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL 389 (462)
Q Consensus 310 ~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~ 389 (462)
.++||+||...+ .+.++.+.++|+|+|+++|.. ++. + .+ ++ ..++.+.++++
T Consensus 342 ----~~~PvivKgv~~------~e~A~~a~~aGad~I~vs~hg-G~~--~--------d~---~~----~~~~~l~~v~~ 393 (511)
T 1kbi_A 342 ----TKLPIVIKGVQR------TEDVIKAAEIGVSGVVLSNHG-GRQ--L--------DF---SR----APIEVLAETMP 393 (511)
T ss_dssp ----CSSCEEEEEECS------HHHHHHHHHTTCSEEEECCTT-TTS--S--------TT---CC----CHHHHHHHHHH
T ss_pred ----hCCcEEEEeCCC------HHHHHHHHHcCCCEEEEcCCC-Ccc--C--------CC---CC----chHHHHHHHHH
Confidence 378999996543 356888999999999999864 221 0 11 11 24677788887
Q ss_pred hc-----CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCC---------ChHHHHHHHHHHHHHHcCCCCHHH
Q 012517 390 LT-----RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGP---------ALIPQIKAELAECLERDGFKSIIE 455 (462)
Q Consensus 390 ~~-----~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP---------~~i~~i~~~L~~~l~~~G~~si~e 455 (462)
.+ .+++|||++|||.+++|+.++|.+|||+|||+|++++ +. .++..++++|+.+|...|++++.|
T Consensus 394 ~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~-~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~e 472 (511)
T 1kbi_A 394 ILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLY-ANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAE 472 (511)
T ss_dssp HHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGG
T ss_pred HHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 76 3479999999999999999999999999999999987 33 467889999999999999999999
Q ss_pred hhcc
Q 012517 456 AVGA 459 (462)
Q Consensus 456 ~~G~ 459 (462)
+++.
T Consensus 473 l~~~ 476 (511)
T 1kbi_A 473 LKPD 476 (511)
T ss_dssp CCGG
T ss_pred HhHH
Confidence 9875
No 37
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.82 E-value=1.7e-18 Score=177.82 Aligned_cols=253 Identities=21% Similarity=0.255 Sum_probs=174.9
Q ss_pred CCCCCC-CCCCCCCccEEEcCeeeCCcEEeCC-CC----CCCHH--HHHHHHcCCccEEEecccccCCCCCCCCCceeee
Q 012517 113 GWVPRE-KRPDPAILGLEVWGRKFSNPLGLAA-GF----DKNAE--AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRL 184 (462)
Q Consensus 113 ~~~p~~-~~~~~~~L~v~v~Gl~f~NPiglAA-G~----dk~~e--~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl 184 (462)
.+.|+- +..++.+++++++|.++++||++|+ |+ ..++| ..+.+.+.|.+++. ++...
T Consensus 47 ~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~-s~~~~-------------- 111 (370)
T 1gox_A 47 LFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWAT-------------- 111 (370)
T ss_dssp EECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEE-CTTCS--------------
T ss_pred eeeccccCCCCCCCCceEECCcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeec-cCCCC--------------
Confidence 355653 3556789999999999999999998 53 34444 44557788988774 33221
Q ss_pred cCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHH
Q 012517 185 RQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVH 264 (462)
Q Consensus 185 ~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~ 264 (462)
..++.+ .+.. +.+..+|+...+ +++...+.++.++
T Consensus 112 --------------~~ieev----~~~~--------------------------~~~~~~QLy~~~-d~~~~~~~~~~a~ 146 (370)
T 1gox_A 112 --------------SSVEEV----ASTG--------------------------PGIRFFQLYVYK-DRNVVAQLVRRAE 146 (370)
T ss_dssp --------------SCHHHH----HTTC--------------------------CCCEEEEECCBS-SHHHHHHHHHHHH
T ss_pred --------------CCHHHH----Hhhc--------------------------CCCceEEEecCC-CchHHHHHHHHHH
Confidence 011111 1100 125667774221 3443445555554
Q ss_pred HHcccCcEEEEeccCCCCC----------------Ccccc-c----------------------CchHHHHHHHHHHHHH
Q 012517 265 TLSQYADYLVINVSSPNTP----------------GLRML-Q----------------------GRKQLKDLVKKVQAAR 305 (462)
Q Consensus 265 ~l~~~aD~leiNvSsPnt~----------------glr~l-q----------------------~~~~l~~ll~aV~~~~ 305 (462)
..+ ++.|+||+.||... +.+.+ + ++....+.++++++.
T Consensus 147 ~~G--~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~- 223 (370)
T 1gox_A 147 RAG--FKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTI- 223 (370)
T ss_dssp HTT--CCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHH-
T ss_pred HCC--CCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHH-
Confidence 444 89999999998651 00111 1 112222445666554
Q ss_pred HhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHH
Q 012517 306 DEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILK 385 (462)
Q Consensus 306 ~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~ 385 (462)
.+.||++|...+ .+.++.+.++|+|+|+++|+. +|. ..++ +..++.+.
T Consensus 224 --------~~~pv~vK~~~~------~e~a~~a~~~Gad~I~vs~~g-gr~----------~~~~-------~~~~~~l~ 271 (370)
T 1gox_A 224 --------TSLPILVKGVIT------AEDARLAVQHGAAGIIVSNHG-ARQ----------LDYV-------PATIMALE 271 (370)
T ss_dssp --------CCSCEEEECCCS------HHHHHHHHHTTCSEEEECCGG-GTS----------STTC-------CCHHHHHH
T ss_pred --------hCCCEEEEecCC------HHHHHHHHHcCCCEEEECCCC-Ccc----------CCCc-------ccHHHHHH
Confidence 378999999743 356788999999999999864 221 1122 23678899
Q ss_pred HHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc----CC----ChHHHHHHHHHHHHHHcCCCCHHHhh
Q 012517 386 EMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG----GP----ALIPQIKAELAECLERDGFKSIIEAV 457 (462)
Q Consensus 386 ~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~----GP----~~i~~i~~~L~~~l~~~G~~si~e~~ 457 (462)
++++.+++++|||++|||.+++|+.+++.+|||+|+++|++++. |+ ..++.++++|+.+|...|++++.|++
T Consensus 272 ~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~ 351 (370)
T 1gox_A 272 EVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEIS 351 (370)
T ss_dssp HHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBTTTCC
T ss_pred HHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhh
Confidence 99999877899999999999999999999999999999999873 44 57888999999999999999999998
Q ss_pred ccc
Q 012517 458 GAD 460 (462)
Q Consensus 458 G~~ 460 (462)
+..
T Consensus 352 ~~~ 354 (370)
T 1gox_A 352 RSH 354 (370)
T ss_dssp GGG
T ss_pred hcc
Confidence 853
No 38
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.81 E-value=1.7e-18 Score=177.10 Aligned_cols=258 Identities=19% Similarity=0.206 Sum_probs=161.3
Q ss_pred CCCCCCccEEEcCeeeCCcEEeCC---CCCCCHH----HHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccc
Q 012517 120 RPDPAILGLEVWGRKFSNPLGLAA---GFDKNAE----AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIIN 192 (462)
Q Consensus 120 ~~~~~~L~v~v~Gl~f~NPiglAA---G~dk~~e----~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN 192 (462)
..++.|++++++|.+|++||.+++ |.+...+ ..+.+.++|.+++ +|+..... .+| .. .
T Consensus 70 ~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~-vGs~~~~l--e~~--~~------~---- 134 (365)
T 3sr7_A 70 DLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFV-TGSYSTAL--KNP--DD------T---- 134 (365)
T ss_dssp CGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEE-C---------------------------
T ss_pred CcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCee-cccccccc--cCc--cc------c----
Confidence 346789999999999999999986 3343433 3444666787765 45544211 011 00 0
Q ss_pred cCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcE
Q 012517 193 RCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADY 272 (462)
Q Consensus 193 ~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~ 272 (462)
.+ ++.+. .| ..++..||+.. .+.+ ++.+.++.+. +|+
T Consensus 135 ----------~~--~v~r~-------------------~P------~~~~ianig~~-~~~e---~~~~~ve~~~--ada 171 (365)
T 3sr7_A 135 ----------SY--QVKKS-------------------RP------HLLLATNIGLD-KPYQ---AGLQAVRDLQ--PLF 171 (365)
T ss_dssp -----------------------------------------------CCEEEEEETT-SCHH---HHHHHHHHHC--CSC
T ss_pred ----------ce--Eehhh-------------------CC------CCcEEEEeCCC-CCHH---HHHHHHHhcC--CCE
Confidence 00 01000 01 13677888753 2333 7778888877 899
Q ss_pred EEEeccCCCC----CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecC-CCChhhHHHHHHHHHHcCCcEEE
Q 012517 273 LVINVSSPNT----PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAP-DLSKEDLEDIAAVAVALRLDGLI 347 (462)
Q Consensus 273 leiNvSsPnt----~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKisp-dl~~~~~~~ia~~~~~~GvdgIi 347 (462)
+++|+...+. +|.+++ +.+.+.++++++. .++||+||... ..+ .+.++.+.++|+|+|+
T Consensus 172 l~ihln~~qe~~~p~Gd~~~---~~~~~~I~~l~~~---------~~~PVivK~vg~g~s----~e~A~~l~~aGad~I~ 235 (365)
T 3sr7_A 172 LQVHINLMQELLMPEGEREF---RSWKKHLSDYAKK---------LQLPFILKEVGFGMD----VKTIQTAIDLGVKTVD 235 (365)
T ss_dssp EEEEECHHHHHTSSSSCCCC---HHHHHHHHHHHHH---------CCSCEEEEECSSCCC----HHHHHHHHHHTCCEEE
T ss_pred EEEeccccccccCCCCCCcH---HHHHHHHHHHHHh---------hCCCEEEEECCCCCC----HHHHHHHHHcCCCEEE
Confidence 9998754210 122221 2355667777664 37899999532 233 4568889999999999
Q ss_pred EecCCccCC----CCCCCCCcc-cccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 348 ISNTTISRP----DPVSKNPVA-KETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 348 vsNTt~~r~----~~~~~~~~~-~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
++|+. ++. +........ ....|+ | ....+.+++. +.+++|||++|||.++.|+.++|.+|||+||+
T Consensus 236 V~g~G-Gt~~a~ie~~r~~~~~~~~~~g~---p----t~~~L~~v~~-~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~i 306 (365)
T 3sr7_A 236 ISGRG-GTSFAYIENRRGGNRSYLNQWGQ---T----TAQVLLNAQP-LMDKVEILASGGIRHPLDIIKALVLGAKAVGL 306 (365)
T ss_dssp CCCBC---------------CGGGTTCSC---B----HHHHHHHHGG-GTTTSEEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred EeCCC-Ccccchhhccccccccccccccc---c----HHHHHHHHHH-hcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 99873 221 000000000 001222 2 3355555544 34479999999999999999999999999999
Q ss_pred chhhhh----cCC----ChHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 423 YTAFAY----GGP----ALIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 423 ~Tali~----~GP----~~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
+|++++ .|+ .+++.++++|+.+|...|+++++|+++.+
T Consensus 307 g~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~~ 352 (365)
T 3sr7_A 307 SRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVD 352 (365)
T ss_dssp SHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGCC
T ss_pred CHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccCC
Confidence 999986 453 47889999999999999999999999754
No 39
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.80 E-value=5.4e-18 Score=173.28 Aligned_cols=275 Identities=16% Similarity=0.137 Sum_probs=180.3
Q ss_pred cEEEcCeeeCCcEEeCC---CC-CCCHH----HHHHH-HcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCC
Q 012517 127 GLEVWGRKFSNPLGLAA---GF-DKNAE----AVEGL-LGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFN 197 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA---G~-dk~~e----~~~~l-~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~n 197 (462)
|+++.+++|+|+|.+|+ +. +.++. .++.. .+.+.|.|+++.+.+.|+ |...|+...+.+|+ .|
T Consensus 7 P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~-g~~~~~~~gi~~d~-~i------ 78 (358)
T 4a3u_A 7 PIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQE-GLGWPYAPGIWSDA-QV------ 78 (358)
T ss_dssp CEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTT-TCCSTTCCBCSSHH-HH------
T ss_pred CceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECcc-ccCCCCCcccCchH-hH------
Confidence 68899999999999998 22 34442 22222 223568888887777663 55555655555443 45
Q ss_pred chhHHHHHHHHHHhhccCcc--cccccCCCCCCC-cccCCCCCCCce-EEE--------EecCCCCCHH----HHHHHHH
Q 012517 198 SEGIVAVAKRLGAQHGKRKL--DETSRTSSSPND-EVKAGGKAGPGI-LGV--------NIGKNKTSED----AAADYVQ 261 (462)
Q Consensus 198 n~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~-~~p~~~~~~~~~-lgv--------nig~nk~t~~----~~~dy~~ 261 (462)
+++..+++.+++...+... .|.++....... ..|.++|..+.+ ..- ...+ .+|.+ .+++|++
T Consensus 79 -~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr-~mt~~eI~~ii~~F~~ 156 (358)
T 4a3u_A 79 -EAWLPITQAVHDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVAR-ALRLDEIPRLLDDYEK 156 (358)
T ss_dssp -HHHHHHHHHHHHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEE-ECCGGGHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCc-cCCHHHHHHHHHHHHH
Confidence 8889999999987765432 333332111000 012222211111 110 0111 23433 3679999
Q ss_pred HHHHHcc-cCcEEEEe---------ccCCCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC
Q 012517 262 GVHTLSQ-YADYLVIN---------VSSPNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD 325 (462)
Q Consensus 262 ~~~~l~~-~aD~leiN---------vSsPnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd 325 (462)
+++++.+ .+|+|||+ |.||.+|-.. +++|| +++.|++++|++++. +-+|.|||+++
T Consensus 157 AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg--------~~~v~vRls~~ 228 (358)
T 4a3u_A 157 AARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIG--------KERTAVRLSPN 228 (358)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC--------GGGEEEEECCS
T ss_pred HHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcC--------ccceEEEeccC
Confidence 9999987 49999995 7799998322 36777 789999999999872 23699999986
Q ss_pred C---------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCcc
Q 012517 326 L---------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396 (462)
Q Consensus 326 l---------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ip 396 (462)
. +.++...+++.+.+.|++.+.++....... . ++.-.+ .+.+++++.+ ..|
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-------------~~~~~~---~~a~~ik~~~--~~~ 288 (358)
T 4a3u_A 229 GEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGT--F-------------GKTDQP---KLSPEIRKVF--KPP 288 (358)
T ss_dssp SCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCS--S-------------SBCSSC---CCHHHHHHHC--CSC
T ss_pred cccCCCcccchHHHHHHHHHhhhccCccccccccccccCc--c-------------cccccH---HHHHHHHHhc--CCc
Confidence 2 123456778888999999999886543211 0 000011 1235667776 456
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 397 LIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 397 IIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
|+ +||+.++++|.+.|+.| ||+|.++++++. +|+|++|++++.
T Consensus 289 v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la-dPdlp~k~~~g~ 332 (358)
T 4a3u_A 289 LV-LNQDYTFETAQAALDSGVADAISFGRPFIG-NPDLPRRFFEKA 332 (358)
T ss_dssp EE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred EE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh-ChhHHHHHHhCC
Confidence 55 78899999999999999 999999999997 799999999875
No 40
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.79 E-value=1.9e-18 Score=179.13 Aligned_cols=281 Identities=12% Similarity=0.091 Sum_probs=175.4
Q ss_pred cEEEcCeeeCCcEEeCC-C--C-CC---------CHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCccccc
Q 012517 127 GLEVWGRKFSNPLGLAA-G--F-DK---------NAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINR 193 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAA-G--~-dk---------~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~ 193 (462)
|+++.+++|+|+|.+|+ . . +. ..+.+.++++.|+|.|+++.+.+.|+ |...|+...+.+|+ .|
T Consensus 20 P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~-g~~~~~~~gi~~d~-~i-- 95 (400)
T 4gbu_A 20 PIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQ-AGGYDNAPGVWSEE-QM-- 95 (400)
T ss_dssp CEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGG-GCCCTTSCBSSSHH-HH--
T ss_pred CeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECcc-ccCCCCCCccCCHH-HH--
Confidence 79999999999999986 1 1 11 23567788899999999998777764 44445555554443 44
Q ss_pred CCCCchhHHHHHHHHHHhhccCcc--cccccCCCCC---CCcc-cCCCCCCCceEEEE-----ec---CCCCCHHH----
Q 012517 194 CGFNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP---NDEV-KAGGKAGPGILGVN-----IG---KNKTSEDA---- 255 (462)
Q Consensus 194 ~G~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~---~~~~-p~~~~~~~~~lgvn-----ig---~nk~t~~~---- 255 (462)
+|+..+++.+++...+..+ .|.++..... ..+. +..++........+ .. ...+|.++
T Consensus 96 -----~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~i 170 (400)
T 4gbu_A 96 -----VEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQY 170 (400)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHH
T ss_pred -----HHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHH
Confidence 7889999999987655432 3333211100 0000 00000000000000 00 00245444
Q ss_pred HHHHHHHHHHHcc-cCcEEEEe---------ccCCCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 256 AADYVQGVHTLSQ-YADYLVIN---------VSSPNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 256 ~~dy~~~~~~l~~-~aD~leiN---------vSsPnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
+++|+++++++.+ .+|+|||+ |.||.+|-.. +++|| +++.|++++|++++ +.+ ||.
T Consensus 171 i~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~v-------g~d-~vg 242 (400)
T 4gbu_A 171 IKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAI-------GHE-KVG 242 (400)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH-------CGG-GEE
T ss_pred HHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHc-------CCC-cEE
Confidence 5799999999987 49999995 8899998322 36777 78999999999987 234 899
Q ss_pred EEecCCCC------------hhhHHHHHHHHHHcC-----CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHH
Q 012517 320 VKIAPDLS------------KEDLEDIAAVAVALR-----LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNN 382 (462)
Q Consensus 320 vKispdl~------------~~~~~~ia~~~~~~G-----vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~ 382 (462)
||||++.. .++..+++..+...+ .+.+.++......+ ......+.+.+. .
T Consensus 243 vRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~-- 309 (400)
T 4gbu_A 243 LRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNP------FLTEGEGEYEGG-----S-- 309 (400)
T ss_dssp EEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSST------TSCTTTTCCCSC-----C--
T ss_pred EEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCc------ccccccchhhhH-----H--
Confidence 99998521 123344555554433 34444443221111 011111222211 1
Q ss_pred HHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 383 ~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
...+++.+ ++|||++|||.+.+++.+.+..| ||+|.++++++. +|+|++|++++.
T Consensus 310 -~~~ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia-dPdl~~k~~~G~ 365 (400)
T 4gbu_A 310 -NDFVYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS-NPDLVDRLEKGL 365 (400)
T ss_dssp -STHHHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH-CTTHHHHHHHTC
T ss_pred -HHHHHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH-CcHHHHHHHcCC
Confidence 13456777 68999999999888887777654 999999999997 799999999874
No 41
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.79 E-value=1.6e-18 Score=177.67 Aligned_cols=267 Identities=16% Similarity=0.151 Sum_probs=167.4
Q ss_pred CCCCCCccEEEcCeeeCCcEEeCC--CC-CCCHH----HHHHHHcCCccEEEeccccc-CCCCCCCCCceeeecCCCccc
Q 012517 120 RPDPAILGLEVWGRKFSNPLGLAA--GF-DKNAE----AVEGLLGLGFGFVEVGSVTP-VPQEGNPKPRIFRLRQEGAII 191 (462)
Q Consensus 120 ~~~~~~L~v~v~Gl~f~NPiglAA--G~-dk~~e----~~~~l~~lGfG~VevgtvT~-~pq~GNp~PR~frl~~d~a~i 191 (462)
..++.+++++++|++|++||.+++ |- +...+ ....+.++|.+.+ ||+... .. || + +.
T Consensus 43 ~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~-vGs~~~~l~---~~----------~-~~ 107 (368)
T 3vkj_A 43 SFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMG-VGSQRVAIE---KA----------E-AR 107 (368)
T ss_dssp BGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEE-CCCCHHHHH---CG----------G-GS
T ss_pred CcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCee-eecchhccC---CH----------H-HH
Confidence 346789999999999999999997 42 22222 3444667787765 455421 00 10 0 00
Q ss_pred ccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCH-HHHHHHHHHHHHHcccC
Q 012517 192 NRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSE-DAAADYVQGVHTLSQYA 270 (462)
Q Consensus 192 N~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~-~~~~dy~~~~~~l~~~a 270 (462)
+.+ +.+++... ..++..|++.....+ ...+.+.+.++.+. +
T Consensus 108 ----------~s~-~~vr~~ap-------------------------~~~~~anlg~~ql~~~~~~~~~~~av~~~~--a 149 (368)
T 3vkj_A 108 ----------ESF-AIVRKVAP-------------------------TIPIIANLGMPQLVKGYGLKEFQDAIQMIE--A 149 (368)
T ss_dssp ----------HHH-HHHHHHCS-------------------------SSCEEEEEEGGGGGTTCCHHHHHHHHHHTT--C
T ss_pred ----------hhH-HHHHHhCc-------------------------CcceecCcCeeecCCCCCHHHHHHHHHHhc--C
Confidence 111 11222111 135777776521111 11235556666664 7
Q ss_pred cEEEEeccCC----CCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe-cCCCChhhHHHHHHHHHHcCCcE
Q 012517 271 DYLVINVSSP----NTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI-APDLSKEDLEDIAAVAVALRLDG 345 (462)
Q Consensus 271 D~leiNvSsP----nt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi-spdl~~~~~~~ia~~~~~~Gvdg 345 (462)
|+++|++..- +..|.+++. ..+.+.+++|++. .++||+||. ..+++ .+.++.+.++|+|+
T Consensus 150 ~al~Ihln~~~~~~~p~g~~~~~--~~~~~~i~~i~~~---------~~vPVivK~vG~g~s----~~~A~~l~~aGad~ 214 (368)
T 3vkj_A 150 DAIAVHLNPAQEVFQPEGEPEYQ--IYALEKLRDISKE---------LSVPIIVKESGNGIS----METAKLLYSYGIKN 214 (368)
T ss_dssp SEEEEECCHHHHHHSSSCCCBCB--THHHHHHHHHHTT---------CSSCEEEECSSSCCC----HHHHHHHHHTTCCE
T ss_pred CCeEEEecchhhhhCCCCCchhh--HHHHHHHHHHHHH---------cCCCEEEEeCCCCCC----HHHHHHHHhCCCCE
Confidence 7777765310 001222221 1255666666653 379999994 34444 45688999999999
Q ss_pred EEEecCCcc--------CCCCC-CC-CCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 346 LIISNTTIS--------RPDPV-SK-NPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 346 IivsNTt~~--------r~~~~-~~-~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
|+++|+... |.... .. +.......+++.+ +...+.++++.++ ++|||++|||.++.|+.++|.+
T Consensus 215 I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~p-----t~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~l 288 (368)
T 3vkj_A 215 FDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVP-----TAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIAL 288 (368)
T ss_dssp EECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCB-----HHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHH
T ss_pred EEEeCCCCCcccchhhhhcccccccchhhcccccccccc-----HHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHc
Confidence 999987321 10000 00 0001112333222 3466778888885 6999999999999999999999
Q ss_pred CCCEEEEchhhhh---cCCC----hHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 416 GATLVQLYTAFAY---GGPA----LIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 416 GAd~Vqv~Tali~---~GP~----~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
|||+||++|++++ .||. ++..+.++|+.+|...|++|++|+++..
T Consensus 289 GA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~ 340 (368)
T 3vkj_A 289 GADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTS 340 (368)
T ss_dssp TCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCC
T ss_pred CCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCC
Confidence 9999999999986 5774 7788999999999999999999998753
No 42
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.79 E-value=4.3e-19 Score=183.55 Aligned_cols=278 Identities=10% Similarity=0.075 Sum_probs=183.6
Q ss_pred cEEEcCeeeCCcEEeCCC---C-CCC-------HHHHHHHHcCCccEEEecccccCCCCCCCCCc-eeeecCCCcccccC
Q 012517 127 GLEVWGRKFSNPLGLAAG---F-DKN-------AEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPR-IFRLRQEGAIINRC 194 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAAG---~-dk~-------~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR-~frl~~d~a~iN~~ 194 (462)
|+++.+++|+|+|.+|+= . +.+ .+.+..+++.|+|.|+++.+.+.|+ |...|+ ...+.+|+ .+
T Consensus 17 P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~-g~~~~~~~~gi~~d~-~i--- 91 (407)
T 3tjl_A 17 SIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQ-ASGYEGAAPGIWTDK-HA--- 91 (407)
T ss_dssp CEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGG-GCCCSSBCCBCSSHH-HH---
T ss_pred CeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCc-cCCCCCcCcccCCHH-HH---
Confidence 789999999999999972 1 222 2456667778999999998887764 333344 33443333 44
Q ss_pred CCCchhHHHHHHHHHHhhccCcc--cccccCCCCC----CCcccCCCCCCCce--------EEEEecCCCCCHHH----H
Q 012517 195 GFNSEGIVAVAKRLGAQHGKRKL--DETSRTSSSP----NDEVKAGGKAGPGI--------LGVNIGKNKTSEDA----A 256 (462)
Q Consensus 195 G~nn~G~~~~~~~l~~~~~~~~~--~~~~~~~~~~----~~~~p~~~~~~~~~--------lgvnig~nk~t~~~----~ 256 (462)
+|+..+++.+++...+..+ .|.++..... ....|.++|..+.. ..-... ..+|.++ +
T Consensus 92 ----~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~p-r~lt~~eI~~ii 166 (407)
T 3tjl_A 92 ----KAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPV-RALTTQEVKDLV 166 (407)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCC-EECCHHHHHHHH
T ss_pred ----HHHHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCC-CcCCHHHHHHHH
Confidence 7889999999987665432 3333322110 00112223322110 000000 1245544 5
Q ss_pred HH-HHHHHHHHcc-cCcEEEEeccC---------CCCCCcc-----cccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 257 AD-YVQGVHTLSQ-YADYLVINVSS---------PNTPGLR-----MLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 257 ~d-y~~~~~~l~~-~aD~leiNvSs---------Pnt~glr-----~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++ |+++++++.+ .+|+||||..| |.+|-.. +++++ +++.+++++|++++. .+ ||.
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~-------~~-~v~ 238 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVG-------AD-KIG 238 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-------GG-GEE
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhC-------CC-eEE
Confidence 68 9999998877 49999999888 9887322 35565 789999999998872 23 899
Q ss_pred EEecCCC---------C----hhhHHHHHHHH---HHcC--CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchH
Q 012517 320 VKIAPDL---------S----KEDLEDIAAVA---VALR--LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN 381 (462)
Q Consensus 320 vKispdl---------~----~~~~~~ia~~~---~~~G--vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al 381 (462)
+||+|.- + .++...+++.+ .+.| +|.|+++....... . . .++. . ..
T Consensus 239 ~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~--~--------~---~~~~-~--~~ 302 (407)
T 3tjl_A 239 IRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGN--V--------D---VSEE-D--QA 302 (407)
T ss_dssp EEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETT--E--------E---CCGG-G--CC
T ss_pred EEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCC--C--------c---CCcc-c--hh
Confidence 9999842 1 23567889999 8889 99999984321100 0 0 0000 0 01
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh---C-CCEEEEchhhhhcCCChHHHHHHHH
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA---G-ATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a---G-Ad~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
..+..+++.+ ++|||++|||++.+||.++++. | ||+|+++++++. +|+|+.|+++++
T Consensus 303 ~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia-NPdL~~ri~~g~ 363 (407)
T 3tjl_A 303 GDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS-NPNLVWKLRDGI 363 (407)
T ss_dssp CCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH-CTTHHHHHHHTC
T ss_pred HHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh-CchHHHHHHcCC
Confidence 1235667777 5799999999999999998887 5 999999999987 699999998875
No 43
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.77 E-value=1e-16 Score=162.50 Aligned_cols=249 Identities=16% Similarity=0.198 Sum_probs=161.3
Q ss_pred CCCCC---CCCCCCCccEEEcCeeeCCcEEeCCCC-CCCHHHHHHHHcC-CccEEEecccccCCCCCCCCCceeeecCCC
Q 012517 114 WVPRE---KRPDPAILGLEVWGRKFSNPLGLAAGF-DKNAEAVEGLLGL-GFGFVEVGSVTPVPQEGNPKPRIFRLRQEG 188 (462)
Q Consensus 114 ~~p~~---~~~~~~~L~v~v~Gl~f~NPiglAAG~-dk~~e~~~~l~~l-GfG~VevgtvT~~pq~GNp~PR~frl~~d~ 188 (462)
|.|+. ...++.+|+++++|+++++||++|+.- -.+.+....+.+. |+|++..+ ++
T Consensus 21 l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~---------~~----------- 80 (336)
T 1ypf_A 21 LIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRF---------QP----------- 80 (336)
T ss_dssp ECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCS---------SG-----------
T ss_pred EecccCCCCCcccCcceEEECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCC---------CC-----------
Confidence 45654 234568999999999999999999843 3445554554544 56665311 10
Q ss_pred cccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcc
Q 012517 189 AIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ 268 (462)
Q Consensus 189 a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~ 268 (462)
...+.+.+++++. ..+++++++. .++.. +.++.+.....
T Consensus 81 ----------~~~~~~i~~~~~~---------------------------g~~v~v~~g~---~~~~~-~~a~~~~~~g~ 119 (336)
T 1ypf_A 81 ----------EKRISFIRDMQSR---------------------------GLIASISVGV---KEDEY-EFVQQLAAEHL 119 (336)
T ss_dssp ----------GGHHHHHHHHHHT---------------------------TCCCEEEECC---SHHHH-HHHHHHHHTTC
T ss_pred ----------HHHHHHHHHHHhc---------------------------CCeEEEeCCC---CHHHH-HHHHHHHhcCC
Confidence 0123444443321 0157888764 34322 22222222222
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|++++|++. | +.....++++++++.. +.|+++|=.- .+ .+.++.+.++|+|+|++
T Consensus 120 ~~~~i~i~~~~----G-----~~~~~~~~i~~lr~~~---------~~~~vi~G~v-~s----~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 120 TPEYITIDIAH----G-----HSNAVINMIQHIKKHL---------PESFVIAGNV-GT----PEAVRELENAGADATKV 176 (336)
T ss_dssp CCSEEEEECSS----C-----CSHHHHHHHHHHHHHC---------TTSEEEEEEE-CS----HHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCC----C-----CcHHHHHHHHHHHHhC---------CCCEEEECCc-CC----HHHHHHHHHcCCCEEEE
Confidence 38999999852 2 3455677888887763 3344444211 12 36788999999999999
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+|+. ++.. .....+|...+. ..+..+.++++.+ ++|||++|||.+++|+.++|.+||++||++|+++.
T Consensus 177 s~hg-G~~~------~~~~~~~~g~~g---~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 177 GIGP-GKVC------ITKIKTGFGTGG---WQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp CSSC-STTC------HHHHHHSCSSTT---CHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred ecCC-Ccee------ecccccCcCCch---hHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 9863 2210 000011111111 1467889999988 79999999999999999999999999999999981
Q ss_pred -------------------cCC--------------------------ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 429 -------------------GGP--------------------------ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 429 -------------------~GP--------------------------~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
.|- .++..++++|+..|...|++|++|+..
T Consensus 245 t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~ 319 (336)
T 1ypf_A 245 HEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRT 319 (336)
T ss_dssp CTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGG
T ss_pred cccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCc
Confidence 231 478899999999999999999999964
No 44
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.73 E-value=2.4e-16 Score=162.25 Aligned_cols=134 Identities=25% Similarity=0.257 Sum_probs=106.5
Q ss_pred CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccC
Q 012517 290 GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETG 369 (462)
Q Consensus 290 ~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~G 369 (462)
+++...+++++|++. .+.||+||.. .+ .+.++.+.++|+|+|+++|.. ++. ..+
T Consensus 209 ~p~~~~~~i~~i~~~---------~~~Pv~vkgv--~t----~e~a~~a~~aGad~I~vs~~g-g~~----------~d~ 262 (380)
T 1p4c_A 209 DASFNWEALRWLRDL---------WPHKLLVKGL--LS----AEDADRCIAEGADGVILSNHG-GRQ----------LDC 262 (380)
T ss_dssp CTTCCHHHHHHHHHH---------CCSEEEEEEE--CC----HHHHHHHHHTTCSEEEECCGG-GTS----------CTT
T ss_pred CccccHHHHHHHHHh---------cCCCEEEEec--Cc----HHHHHHHHHcCCCEEEEcCCC-CCc----------CCC
Confidence 344445778888775 3789999964 22 456888999999999998753 111 112
Q ss_pred CCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCC---------ChHHHHHHH
Q 012517 370 GLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGP---------ALIPQIKAE 440 (462)
Q Consensus 370 GlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP---------~~i~~i~~~ 440 (462)
| . .+++.+.++++.+ ++|||++|||.+++|+.+++.+||++|+++|++++ +. ..++.++++
T Consensus 263 ~---~----~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~-~~~~~g~~~v~~~~~~l~~e 332 (380)
T 1p4c_A 263 A---I----SPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY-GLAARGETGVDEVLTLLKAD 332 (380)
T ss_dssp C---C----CGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred C---c----CHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH-HHHhcCHHHHHHHHHHHHHH
Confidence 2 2 2567788888888 46999999999999999999999999999999987 45 367888999
Q ss_pred HHHHHHHcCCCCHHHhhcc
Q 012517 441 LAECLERDGFKSIIEAVGA 459 (462)
Q Consensus 441 L~~~l~~~G~~si~e~~G~ 459 (462)
++.+|...|++++.|+++.
T Consensus 333 l~~~m~~~G~~~i~el~~~ 351 (380)
T 1p4c_A 333 IDRTLAQIGCPDITSLSPD 351 (380)
T ss_dssp HHHHHHHHTCCBGGGCCGG
T ss_pred HHHHHHHhCCCCHHHhccC
Confidence 9999999999999999875
No 45
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.65 E-value=2.5e-14 Score=148.22 Aligned_cols=284 Identities=17% Similarity=0.208 Sum_probs=163.0
Q ss_pred CCCCC--CCCCCCccEEEc-CeeeCCcEEeCC-CCCCCHHHHHHHHcCC-ccEEEecccccCCCCCCCCCceeeecCCCc
Q 012517 115 VPREK--RPDPAILGLEVW-GRKFSNPLGLAA-GFDKNAEAVEGLLGLG-FGFVEVGSVTPVPQEGNPKPRIFRLRQEGA 189 (462)
Q Consensus 115 ~p~~~--~~~~~~L~v~v~-Gl~f~NPiglAA-G~dk~~e~~~~l~~lG-fG~VevgtvT~~pq~GNp~PR~frl~~d~a 189 (462)
.|+.. ..++.+|+++++ |+++++||.+|+ +...+++...++.+.| .|++. ++.+++.+..+. +++.+.....+
T Consensus 18 ~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~-~~~~~~~~~~g 95 (404)
T 1eep_A 18 IPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEI-EKVKTYKFQKT 95 (404)
T ss_dssp CCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHH-HHHHTCC----
T ss_pred ccCCCCcCccccccceeccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHH-HHHHhhccCCC
Confidence 45532 235688999999 999999999998 3577888888877766 56654 777765422111 01000000001
Q ss_pred ccccCC--CCc---------hhHHHHHHHHHHhhccCcccccccCCCCCCCcccCC--CCCCCceEEEEecCCCCCHHHH
Q 012517 190 IINRCG--FNS---------EGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAG--GKAGPGILGVNIGKNKTSEDAA 256 (462)
Q Consensus 190 ~iN~~G--~nn---------~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~lgvnig~nk~t~~~~ 256 (462)
+++.-+ |+. .+++...+.+... ...|.. ......++++|++.+ ++
T Consensus 96 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~~p~~~~~~~~~~~~~~~i~~~---~~-- 153 (404)
T 1eep_A 96 INTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHK-----------------EDFPNACKDLNNKLRVGAAVSID---ID-- 153 (404)
T ss_dssp ---------------------------------------------------CCTTCCBCTTSCBCCEEEECSC---TT--
T ss_pred ceeccccccccccccccCCCCCHHHHHHHHHHh-----------------hhcchhhhhcccCceEEEEeCCC---hh--
Confidence 221111 110 0000000000000 011100 000123578999753 22
Q ss_pred HHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
+.+.++.+. ..+|++++|.++ | +++.+.++++++++.. .+.||+++--. + .+.+
T Consensus 154 --~~~~a~~~~~~G~d~i~i~~~~----g-----~~~~~~e~i~~ir~~~--------~~~pviv~~v~--~----~~~a 208 (404)
T 1eep_A 154 --TIERVEELVKAHVDILVIDSAH----G-----HSTRIIELIKKIKTKY--------PNLDLIAGNIV--T----KEAA 208 (404)
T ss_dssp --HHHHHHHHHHTTCSEEEECCSC----C-----SSHHHHHHHHHHHHHC--------TTCEEEEEEEC--S----HHHH
T ss_pred --HHHHHHHHHHCCCCEEEEeCCC----C-----ChHHHHHHHHHHHHHC--------CCCeEEEcCCC--c----HHHH
Confidence 222223332 349999998654 1 2356778888887652 26899985322 1 4567
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEEEecCCCCHHHHHHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
+.+.+.|+|+|+++.. ++.. ......+|+.++ ....+.++++.++ .++|||++|||.+++|+.+++.
T Consensus 209 ~~a~~~Gad~I~vg~~----~G~~---~~~~~~~~~g~p-----~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala 276 (404)
T 1eep_A 209 LDLISVGADCLKVGIG----PGSI---CTTRIVAGVGVP-----QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA 276 (404)
T ss_dssp HHHHTTTCSEEEECSS----CSTT---SHHHHHHCCCCC-----HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC----CCcC---cCccccCCCCcc-----hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHH
Confidence 8889999999999421 1100 000011333222 2344555555332 2799999999999999999999
Q ss_pred hCCCEEEEchhhhh-------------------------------------------------cCC-----------ChH
Q 012517 415 AGATLVQLYTAFAY-------------------------------------------------GGP-----------ALI 434 (462)
Q Consensus 415 aGAd~Vqv~Tali~-------------------------------------------------~GP-----------~~i 434 (462)
+|||+|+++|+|+. +|. .++
T Consensus 277 ~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~ 356 (404)
T 1eep_A 277 AGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDIL 356 (404)
T ss_dssp HTCSEEEECHHHHTBTTSSSCEEEETTEEEEC------------------------------------CEECCBCHHHHH
T ss_pred cCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHH
Confidence 99999999999952 111 456
Q ss_pred HHHHHHHHHHHHHcCCCCHHHhhcc
Q 012517 435 PQIKAELAECLERDGFKSIIEAVGA 459 (462)
Q Consensus 435 ~~i~~~L~~~l~~~G~~si~e~~G~ 459 (462)
+.+.++|+..|...|++|++|+...
T Consensus 357 ~~l~~el~~~m~~~G~~~i~~l~~~ 381 (404)
T 1eep_A 357 TQLKGGLMSGMGYLGAATISDLKIN 381 (404)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCCHHHHhhc
Confidence 7778899999999999999999864
No 46
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=6.6e-14 Score=144.52 Aligned_cols=270 Identities=15% Similarity=0.109 Sum_probs=150.9
Q ss_pred CCCCCCccEEEcCeeeCCcEEeCCC-CCCCHHHHHHHHcCCccEEEec-ccccCCCCCCCCC---ceeeecCC--Ccc-c
Q 012517 120 RPDPAILGLEVWGRKFSNPLGLAAG-FDKNAEAVEGLLGLGFGFVEVG-SVTPVPQEGNPKP---RIFRLRQE--GAI-I 191 (462)
Q Consensus 120 ~~~~~~L~v~v~Gl~f~NPiglAAG-~dk~~e~~~~l~~lGfG~Vevg-tvT~~pq~GNp~P---R~frl~~d--~a~-i 191 (462)
..++.+++++++|+++++||++|+. .-.+.+...++.+.|..++... .+. +...++.. .+....+. ..+ .
T Consensus 51 ~~~~vdlst~l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~--~~~~~~~~~~eeia~~~~~~d~~~g~ 128 (393)
T 2qr6_A 51 SSKDVDTTWHIDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLW--GRHADLDEAIAKVIAAYEEGDQAAAT 128 (393)
T ss_dssp CGGGCBCCEEETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSST--TTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHCCceeEEcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEeccee--cccCCchhHHHHHHHHHHhcCCCccc
Confidence 4457889999999999999999983 3345577778888885444432 211 11111111 00000000 000 0
Q ss_pred cc----CCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHc
Q 012517 192 NR----CGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLS 267 (462)
Q Consensus 192 N~----~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~ 267 (462)
+. |-.. ...+.+.+.+++... . ..+++++++.+ . ..++.+.+..+.
T Consensus 129 ~~~~q~~~~~-~d~~~~~~~i~~~~~---------------~---------g~~v~~~v~~~--~---~~e~a~~~~~ag 178 (393)
T 2qr6_A 129 RTLQELHAAP-LDTELLSERIAQVRD---------------S---------GEIVAVRVSPQ--N---VREIAPIVIKAG 178 (393)
T ss_dssp HHHHHHHHSC-CCHHHHHHHHHHHHH---------------T---------TSCCEEEECTT--T---HHHHHHHHHHTT
T ss_pred hhhhhccccc-CCHHHHHHHHHHHhh---------------c---------CCeEEEEeCCc--c---HHHHHHHHHHCC
Confidence 00 0000 001111111111110 0 12456666542 1 235555554443
Q ss_pred ccCcEEEEeccCCCCCCcccccCch-HHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEE
Q 012517 268 QYADYLVINVSSPNTPGLRMLQGRK-QLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGL 346 (462)
Q Consensus 268 ~~aD~leiNvSsPnt~glr~lq~~~-~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgI 346 (462)
+|+++++.+ |...... .++ .+.+ +.++++. .++||++|--. + .+.++.+.+.|+|+|
T Consensus 179 --ad~i~i~~~-~~~~~~~---~~~~~~~~-i~~l~~~---------~~~pvi~ggi~--t----~e~a~~~~~~Gad~i 236 (393)
T 2qr6_A 179 --ADLLVIQGT-LISAEHV---NTGGEALN-LKEFIGS---------LDVPVIAGGVN--D----YTTALHMMRTGAVGI 236 (393)
T ss_dssp --CSEEEEECS-SCCSSCC---CC-----C-HHHHHHH---------CSSCEEEECCC--S----HHHHHHHHTTTCSEE
T ss_pred --CCEEEEeCC-ccccccC---CCcccHHH-HHHHHHh---------cCCCEEECCcC--C----HHHHHHHHHcCCCEE
Confidence 899999843 3211110 111 2222 3455543 37899997432 2 234778889999999
Q ss_pred EEecCCc-cCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh-------cCCC-ccEEEecCCCCHHHHHHHHHhCC
Q 012517 347 IISNTTI-SRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL-------TRGK-IPLIGCGGISSGEDAYRKIRAGA 417 (462)
Q Consensus 347 ivsNTt~-~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~-------~~~~-ipIIg~GGI~s~~dA~e~i~aGA 417 (462)
+++|... .+. ..| .|.| ..+.+.++++. ++++ +|||++|||.+++|+.++|.+||
T Consensus 237 ~vg~Gg~~~~~----------~~~--~g~~----~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA 300 (393)
T 2qr6_A 237 IVGGGENTNSL----------ALG--MEVS----MATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGA 300 (393)
T ss_dssp EESCCSCCHHH----------HTS--CCCC----HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTC
T ss_pred EECCCcccccc----------cCC--CCCC----hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCC
Confidence 9977321 010 011 1222 45666666665 5434 99999999999999999999999
Q ss_pred CEEEEchhhhh----------cC-----------C------------ChHH-------------HHHHHHHHHHHHcCCC
Q 012517 418 TLVQLYTAFAY----------GG-----------P------------ALIP-------------QIKAELAECLERDGFK 451 (462)
Q Consensus 418 d~Vqv~Tali~----------~G-----------P------------~~i~-------------~i~~~L~~~l~~~G~~ 451 (462)
++||++|+|+. .| - .+.. .++++|+..|...|++
T Consensus 301 ~~V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~ 380 (393)
T 2qr6_A 301 DAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYT 380 (393)
T ss_dssp SEEEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCS
T ss_pred CEEEECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999721 11 1 1222 3469999999999999
Q ss_pred CHHHhhcc
Q 012517 452 SIIEAVGA 459 (462)
Q Consensus 452 si~e~~G~ 459 (462)
|++|+...
T Consensus 381 ~i~el~~~ 388 (393)
T 2qr6_A 381 DLKSFQKV 388 (393)
T ss_dssp BHHHHTTC
T ss_pred CHHHHhhc
Confidence 99999754
No 47
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.59 E-value=4.8e-13 Score=136.32 Aligned_cols=232 Identities=16% Similarity=0.152 Sum_probs=152.4
Q ss_pred CCccEEEcCeeeCCcEEeCC-CCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHH
Q 012517 124 AILGLEVWGRKFSNPLGLAA-GFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIV 202 (462)
Q Consensus 124 ~~L~v~v~Gl~f~NPiglAA-G~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~ 202 (462)
.+++++++|++++.||+.|+ ....+.+...++.+.| |+-++.+ | ..++
T Consensus 30 ~~~~t~l~g~~l~~Pii~ApM~~vte~~lA~A~a~~G-g~gvi~~--------~----------------------~s~e 78 (361)
T 3r2g_A 30 TTSTDRLGKLTLNLPVISANMDTITESNMANFMHSKG-AMGALHR--------F----------------------MTIE 78 (361)
T ss_dssp CCEECTTSSCEESSCEEECCSTTTCSHHHHHHHHHTT-CEEBCCS--------C----------------------SCHH
T ss_pred ceeeEEECCEEcCCCEEECCCCCchHHHHHHHHHHcC-CCEEEeC--------C----------------------CCHH
Confidence 34555899999999999888 4567788888888887 2222221 1 1134
Q ss_pred HHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCC
Q 012517 203 AVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNT 282 (462)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt 282 (462)
.+.+.+++.. ..++++++.+ +...++++.+..+ .+|+|+++.+..+.
T Consensus 79 e~~~~i~~~~---------------------------~~~~~~~g~~----~~~~e~~~~a~~a--GvdvI~id~a~G~~ 125 (361)
T 3r2g_A 79 ENIQEFKKCK---------------------------GPVFVSVGCT----ENELQRAEALRDA--GADFFCVDVAHAHA 125 (361)
T ss_dssp HHHHHHHTCC---------------------------SCCBEEECSS----HHHHHHHHHHHHT--TCCEEEEECSCCSS
T ss_pred HHHHHHhhcc---------------------------eEEEEEcCCC----HHHHHHHHHHHHc--CCCEEEEeCCCCCc
Confidence 5555444221 1244556532 2222444444333 39999999876432
Q ss_pred CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE-ecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCC
Q 012517 283 PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK-IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSK 361 (462)
Q Consensus 283 ~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK-ispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~ 361 (462)
+.+.++++++++.. .++||++| +. + .+.++.+.++|+|+|+++|.. ++. ..
T Consensus 126 ---------~~~~e~I~~ir~~~--------~~~~Vi~G~V~---T----~e~A~~a~~aGaD~I~Vg~g~-G~~--~~- 177 (361)
T 3r2g_A 126 ---------KYVGKTLKSLRQLL--------GSRCIMAGNVA---T----YAGADYLASCGADIIKAGIGG-GSV--CS- 177 (361)
T ss_dssp ---------HHHHHHHHHHHHHH--------TTCEEEEEEEC---S----HHHHHHHHHTTCSEEEECCSS-SSC--HH-
T ss_pred ---------HhHHHHHHHHHHhc--------CCCeEEEcCcC---C----HHHHHHHHHcCCCEEEEcCCC-CcC--cc-
Confidence 34567788887754 36899998 42 2 345788899999999997542 110 00
Q ss_pred CCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh-------------
Q 012517 362 NPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY------------- 428 (462)
Q Consensus 362 ~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~------------- 428 (462)
.....|. |.| .+..|.++++.. . |||+.|||.+++|+.++|.+|||+||++|.|+-
T Consensus 178 ---tr~~~g~-g~p----~l~aI~~~~~~~--~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~ 246 (361)
T 3r2g_A 178 ---TRIKTGF-GVP----MLTCIQDCSRAD--R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDD 246 (361)
T ss_dssp ---HHHHHCC-CCC----HHHHHHHHTTSS--S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTT
T ss_pred ---ccccCCc-cHH----HHHHHHHHHHhC--C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecC
Confidence 0000011 122 456666666655 2 999999999999999999999999999999851
Q ss_pred --------------------------------------cCC--ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 429 --------------------------------------GGP--ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 429 --------------------------------------~GP--~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
.|+ +++.++..+|+.-|.--|.++|.|+.-
T Consensus 247 g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~ 316 (361)
T 3r2g_A 247 GSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQR 316 (361)
T ss_dssp SCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred CeEEEEEecCCCcchhhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHh
Confidence 122 357788888999999999999999954
No 48
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.55 E-value=5.2e-15 Score=141.85 Aligned_cols=120 Identities=20% Similarity=0.277 Sum_probs=95.7
Q ss_pred ccCcEEE--EeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe---cCCCChhhHHHHHHHHHHcC
Q 012517 268 QYADYLV--INVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI---APDLSKEDLEDIAAVAVALR 342 (462)
Q Consensus 268 ~~aD~le--iNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi---spdl~~~~~~~ia~~~~~~G 342 (462)
.+||.|+ +|++| ++..+ .+.+.+.+++|++++ + |+++|+ +++++++++.++++.+.++|
T Consensus 82 ~Gad~Id~viN~g~-----~~~~~-~~~~~~~i~~v~~a~---------~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaG 145 (225)
T 1mzh_A 82 DGAQELDIVWNLSA-----FKSEK-YDFVVEELKEIFRET---------P-SAVHKVIVETPYLNEEEIKKAVEICIEAG 145 (225)
T ss_dssp TTCSEEEEECCHHH-----HHTTC-HHHHHHHHHHHHHTC---------T-TSEEEEECCGGGCCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEecHHH-----HhcCC-hHHHHHHHHHHHHHh---------c-CceEEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 4599998 79998 23222 244555577776642 3 899999 89999889999999999999
Q ss_pred CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 343 LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 343 vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
+|+| .+||.. ..|| .+++.++.+++.+++++||+++|||.|++||.++|++|||.|++
T Consensus 146 ad~I-~tstg~-------------~~gg--------a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~ 203 (225)
T 1mzh_A 146 ADFI-KTSTGF-------------APRG--------TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGT 203 (225)
T ss_dssp CSEE-ECCCSC-------------SSSC--------CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCEE-EECCCC-------------CCCC--------CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHH
Confidence 9999 667631 1233 25788999999887789999999999999999999999999888
Q ss_pred chh
Q 012517 423 YTA 425 (462)
Q Consensus 423 ~Ta 425 (462)
+++
T Consensus 204 s~~ 206 (225)
T 1mzh_A 204 SSG 206 (225)
T ss_dssp SCH
T ss_pred ccH
Confidence 765
No 49
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.55 E-value=9.7e-13 Score=134.02 Aligned_cols=249 Identities=18% Similarity=0.146 Sum_probs=155.4
Q ss_pred CCCCCC--CC-CCCCccEEEc-----CeeeCCcEEeCCC-CCCCHHHHHHHHcCC-ccEEEecccccCCCCCCCCCceee
Q 012517 114 WVPREK--RP-DPAILGLEVW-----GRKFSNPLGLAAG-FDKNAEAVEGLLGLG-FGFVEVGSVTPVPQEGNPKPRIFR 183 (462)
Q Consensus 114 ~~p~~~--~~-~~~~L~v~v~-----Gl~f~NPiglAAG-~dk~~e~~~~l~~lG-fG~VevgtvT~~pq~GNp~PR~fr 183 (462)
+.|+.. .. ++.+++++++ |++++.||..|+- ...+.+...+..+.| .|++. ++.++.
T Consensus 27 l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~-~~~s~e------------ 93 (351)
T 2c6q_A 27 LRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVH-KHYSLV------------ 93 (351)
T ss_dssp ECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECC-TTCCHH------------
T ss_pred EECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEc-CCCCHH------------
Confidence 456542 23 5678999999 9999999999983 566788888788877 44442 222211
Q ss_pred ecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHH
Q 012517 184 LRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGV 263 (462)
Q Consensus 184 l~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~ 263 (462)
.+.+.+++. +. . . ..++++++. +++ ++....
T Consensus 94 -------------------~~~~~i~~~-p~---------------~-------l-~~v~~~~g~---~~~---~~~~~~ 124 (351)
T 2c6q_A 94 -------------------QWQEFAGQN-PD---------------C-------L-EHLAASSGT---GSS---DFEQLE 124 (351)
T ss_dssp -------------------HHHHHHHHC-GG---------------G-------C-TTEEEEECS---SHH---HHHHHH
T ss_pred -------------------HHHHHHhhC-ch---------------h-------h-heeEeecCC---ChH---HHHHHH
Confidence 111222210 00 0 0 136777764 333 222222
Q ss_pred HHHcc--cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHc
Q 012517 264 HTLSQ--YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVAL 341 (462)
Q Consensus 264 ~~l~~--~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~ 341 (462)
..+.. .+|.++++++. | +...+.+.++++++.. .+.||++|--. + .+.++.+.++
T Consensus 125 ~l~~~~~g~~~i~i~~~~----g-----~~~~~~~~i~~lr~~~--------~~~~vi~g~v~--t----~e~A~~a~~a 181 (351)
T 2c6q_A 125 QILEAIPQVKYICLDVAN----G-----YSEHFVEFVKDVRKRF--------PQHTIMAGNVV--T----GEMVEELILS 181 (351)
T ss_dssp HHHHHCTTCCEEEEECSC----T-----TBHHHHHHHHHHHHHC--------TTSEEEEEEEC--S----HHHHHHHHHT
T ss_pred HHHhccCCCCEEEEEecC----C-----CcHHHHHHHHHHHHhc--------CCCeEEEEeCC--C----HHHHHHHHHh
Confidence 22222 58999987642 1 2244556777776652 26899988533 2 3557888999
Q ss_pred CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 342 RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 342 GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
|+|+|+++|..-. .. ......|+ |.| .+..+.++.+.++ .++|||+.|||.++.|+.++|.+||++|
T Consensus 182 GaD~I~v~~g~G~----~~---~~r~~~g~-~~p----~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V 249 (351)
T 2c6q_A 182 GADIIKVGIGPGS----VC---TTRKKTGV-GYP----QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFV 249 (351)
T ss_dssp TCSEEEECSSCST----TB---CHHHHHCB-CCC----HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred CCCEEEECCCCCc----Cc---CccccCCC-Ccc----HHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCce
Confidence 9999999864211 00 00000111 222 2333444433321 1699999999999999999999999999
Q ss_pred EEchhhhh-----------------------------------------cC---------C--ChHHHHHHHHHHHHHHc
Q 012517 421 QLYTAFAY-----------------------------------------GG---------P--ALIPQIKAELAECLERD 448 (462)
Q Consensus 421 qv~Tali~-----------------------------------------~G---------P--~~i~~i~~~L~~~l~~~ 448 (462)
|++|.|+. +| | .++..++.+|+..|...
T Consensus 250 ~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~ 329 (351)
T 2c6q_A 250 MLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYV 329 (351)
T ss_dssp EESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHH
T ss_pred eccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHc
Confidence 99999972 22 1 35677888899999999
Q ss_pred CCCCHHHhhcc
Q 012517 449 GFKSIIEAVGA 459 (462)
Q Consensus 449 G~~si~e~~G~ 459 (462)
|++|++|+...
T Consensus 330 G~~~i~~l~~~ 340 (351)
T 2c6q_A 330 GAAKLKELSRR 340 (351)
T ss_dssp TCSBGGGHHHH
T ss_pred CCCCHHHHhhC
Confidence 99999999753
No 50
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.53 E-value=5.4e-13 Score=134.76 Aligned_cols=195 Identities=21% Similarity=0.274 Sum_probs=133.7
Q ss_pred eCCcEEeCC--CCCCCHHHHHHHHcCC-ccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHh
Q 012517 135 FSNPLGLAA--GFDKNAEAVEGLLGLG-FGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQ 211 (462)
Q Consensus 135 f~NPiglAA--G~dk~~e~~~~l~~lG-fG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~ 211 (462)
+++||..++ | -.+.+......+.| +|++..+.+++ +.+....+++++.
T Consensus 11 ~~~Pii~apM~g-~s~~~la~av~~aG~lG~i~~~~~~~----------------------------~~~~~~i~~i~~~ 61 (332)
T 2z6i_A 11 IDYPIFQGGMAW-VADGDLAGAVSKAGGLGIIGGGNAPK----------------------------EVVKANIDKIKSL 61 (332)
T ss_dssp CSSSEEECCCTT-TCCHHHHHHHHHHTSBEEEECTTCCH----------------------------HHHHHHHHHHHHH
T ss_pred CCCCEEeCCCCC-CCcHHHHHHHHhCCCcEEeCCCCCCH----------------------------HHHHHHHHHHHHh
Confidence 789998886 4 35677777777777 68887653221 2233444444432
Q ss_pred hccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCc
Q 012517 212 HGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGR 291 (462)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~ 291 (462)
. +.+++||+..+ +++ .+++++.+.... +|+|+++..+|.
T Consensus 62 ~--------------------------~~p~gvnl~~~--~~~-~~~~~~~a~~~g--~d~V~~~~g~p~---------- 100 (332)
T 2z6i_A 62 T--------------------------DKPFGVNIMLL--SPF-VEDIVDLVIEEG--VKVVTTGAGNPS---------- 100 (332)
T ss_dssp C--------------------------CSCEEEEECTT--STT-HHHHHHHHHHTT--CSEEEECSSCGG----------
T ss_pred c--------------------------CCCEEEEecCC--CCC-HHHHHHHHHHCC--CCEEEECCCChH----------
Confidence 1 12689999763 221 335555554444 999999998762
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCC
Q 012517 292 KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGL 371 (462)
Q Consensus 292 ~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGl 371 (462)
++++.+++. +.||++|+.. .+.++.+.+.|+|+|++.+. +.||.
T Consensus 101 ----~~i~~l~~~----------g~~v~~~v~~-------~~~a~~~~~~GaD~i~v~g~---------------~~GG~ 144 (332)
T 2z6i_A 101 ----KYMERFHEA----------GIIVIPVVPS-------VALAKRMEKIGADAVIAEGM---------------EAGGH 144 (332)
T ss_dssp ----GTHHHHHHT----------TCEEEEEESS-------HHHHHHHHHTTCSCEEEECT---------------TSSEE
T ss_pred ----HHHHHHHHc----------CCeEEEEeCC-------HHHHHHHHHcCCCEEEEECC---------------CCCCC
Confidence 345555532 5899999842 34577888999999999743 12454
Q ss_pred CCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCCh--HHHHHHHH
Q 012517 372 SGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPAL--IPQIKAEL 441 (462)
Q Consensus 372 SG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~--i~~i~~~L 441 (462)
+|. ...+..++++++.+ ++|||+.|||.+++++.+++.+|||.|+++|+|+. .|+. ...+++.+
T Consensus 145 ~g~---~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~-~~e~~~~~~~k~~~ 210 (332)
T 2z6i_A 145 IGK---LTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVV-AKESNAHPNYKEKI 210 (332)
T ss_dssp CCS---SCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT-BTTCCSCHHHHHHH
T ss_pred CCC---ccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhc-CccccccHHHHHHH
Confidence 442 23568889999988 79999999999999999999999999999999987 4643 34444433
No 51
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.48 E-value=1.1e-11 Score=126.74 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=129.0
Q ss_pred CCCCCccEEEc-CeeeCCcEEeCCC-CCCCHHHHHHHH-cCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCC
Q 012517 121 PDPAILGLEVW-GRKFSNPLGLAAG-FDKNAEAVEGLL-GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFN 197 (462)
Q Consensus 121 ~~~~~L~v~v~-Gl~f~NPiglAAG-~dk~~e~~~~l~-~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~n 197 (462)
+++.+|++++. ++.|+.||..++= .-.+.+...+++ ..|+|++. + |
T Consensus 29 ~~~vdl~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~-~---------~--------------------- 77 (361)
T 3khj_A 29 PREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIH-K---------N--------------------- 77 (361)
T ss_dssp GGGCCCCEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEEC-S---------S---------------------
T ss_pred HHHccCceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEe-c---------C---------------------
Confidence 45678999997 7999999988762 224556666555 55688773 0 1
Q ss_pred chhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEec
Q 012517 198 SEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINV 277 (462)
Q Consensus 198 n~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNv 277 (462)
...+.+.+.+++.... ...++++|++.+. .++++.+..+. +|+|+||.
T Consensus 78 -~s~e~~~~~I~~vk~~-----------------------~~~pvga~ig~~~------~e~a~~l~eaG--ad~I~ld~ 125 (361)
T 3khj_A 78 -MDMESQVNEVLKVKNS-----------------------GGLRVGAAIGVNE------IERAKLLVEAG--VDVIVLDS 125 (361)
T ss_dssp -SCHHHHHHHHHHHHHT-----------------------TCCCCEEEECTTC------HHHHHHHHHTT--CSEEEECC
T ss_pred -CCHHHHHHHHHHHHhc-----------------------cCceEEEEeCCCH------HHHHHHHHHcC--cCeEEEeC
Confidence 0122333333332110 0126889998652 25555554444 99999996
Q ss_pred cCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCC
Q 012517 278 SSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPD 357 (462)
Q Consensus 278 SsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~ 357 (462)
+.. +++.+.+.++++++. .+.||+++-..+ .+.++.+.++|+|+|+++.+.-.
T Consensus 126 a~G---------~~~~~~~~i~~i~~~---------~~~~Vivg~v~t------~e~A~~l~~aGaD~I~VG~~~Gs--- 178 (361)
T 3khj_A 126 AHG---------HSLNIIRTLKEIKSK---------MNIDVIVGNVVT------EEATKELIENGADGIKVGIGPGS--- 178 (361)
T ss_dssp SCC---------SBHHHHHHHHHHHHH---------CCCEEEEEEECS------HHHHHHHHHTTCSEEEECSSCCT---
T ss_pred CCC---------CcHHHHHHHHHHHHh---------cCCcEEEccCCC------HHHHHHHHHcCcCEEEEecCCCc---
Confidence 532 234556667776654 268999865422 34578889999999998532110
Q ss_pred CCCCCCcccccCCCCCCcCccchHHHHHHH---HHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 358 PVSKNPVAKETGGLSGKPLLSLSNNILKEM---YLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 358 ~~~~~~~~~~~GGlSG~~l~~~al~~v~~i---~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
.. . ....-|. |.| .+..+.++ .+.+ ++|||+.|||.+++|+.+++.+|||.||++|+|+
T Consensus 179 -~~--~-tr~~~g~-g~p----~~~~i~~v~~~~~~~--~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~ 240 (361)
T 3khj_A 179 -IC--T-TRIVAGV-GVP----QITAIEKCSSVASKF--GIPIIADGGIRYSGDIGKALAVGASSVMIGSILA 240 (361)
T ss_dssp -TC--C-HHHHTCB-CCC----HHHHHHHHHHHHHHH--TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTT
T ss_pred -CC--C-cccccCC-CCC----cHHHHHHHHHHHhhc--CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhh
Confidence 00 0 0000111 222 23344444 4445 6999999999999999999999999999999986
No 52
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.48 E-value=2.9e-12 Score=129.15 Aligned_cols=199 Identities=18% Similarity=0.302 Sum_probs=135.0
Q ss_pred eeeCCcEEeCC-CCCCCHHHHHHHHcCC-ccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHH
Q 012517 133 RKFSNPLGLAA-GFDKNAEAVEGLLGLG-FGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGA 210 (462)
Q Consensus 133 l~f~NPiglAA-G~dk~~e~~~~l~~lG-fG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~ 210 (462)
+.+++||..|+ +.-.+.+......+.| .|++..+.+ +.+.+....+++++
T Consensus 23 l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~----------------------------~~~~l~~~i~~i~~ 74 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAM----------------------------KPDDLRKAISELRQ 74 (326)
T ss_dssp HTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTC----------------------------CHHHHHHHHHHHHT
T ss_pred cCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCC----------------------------CHHHHHHHHHHHHH
Confidence 56789999887 3356788888887777 577642211 11223333444432
Q ss_pred hhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccC
Q 012517 211 QHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQG 290 (462)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~ 290 (462)
.. ..+++||+... +++ .+++++.+.... +|++.++..+|.
T Consensus 75 ~~--------------------------~~p~gVnl~~~--~~~-~~~~~~~~~~~g--~d~V~l~~g~p~--------- 114 (326)
T 3bo9_A 75 KT--------------------------DKPFGVNIILV--SPW-ADDLVKVCIEEK--VPVVTFGAGNPT--------- 114 (326)
T ss_dssp TC--------------------------SSCEEEEEETT--STT-HHHHHHHHHHTT--CSEEEEESSCCH---------
T ss_pred hc--------------------------CCCEEEEEecc--CCC-HHHHHHHHHHCC--CCEEEECCCCcH---------
Confidence 10 13689998762 221 235555555544 999999988761
Q ss_pred chHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCC
Q 012517 291 RKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGG 370 (462)
Q Consensus 291 ~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GG 370 (462)
++++.+++ ...|++++++. .+.++.+.+.|+|+|++.+.. .||
T Consensus 115 -----~~~~~l~~----------~g~~v~~~v~s-------~~~a~~a~~~GaD~i~v~g~~---------------~GG 157 (326)
T 3bo9_A 115 -----KYIRELKE----------NGTKVIPVVAS-------DSLARMVERAGADAVIAEGME---------------SGG 157 (326)
T ss_dssp -----HHHHHHHH----------TTCEEEEEESS-------HHHHHHHHHTTCSCEEEECTT---------------SSE
T ss_pred -----HHHHHHHH----------cCCcEEEEcCC-------HHHHHHHHHcCCCEEEEECCC---------------CCc
Confidence 34455543 25799998853 244667888999999998642 356
Q ss_pred CCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC--hHHHHHHHHH
Q 012517 371 LSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA--LIPQIKAELA 442 (462)
Q Consensus 371 lSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~--~i~~i~~~L~ 442 (462)
.+|. ...++.+.++++.+ ++|||+.|||.+++|+.+++.+||+.|+++|+|+.. ++ ....+++.+.
T Consensus 158 ~~G~---~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~-~e~~~~~~~k~~~~ 225 (326)
T 3bo9_A 158 HIGE---VTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVAS-VESDVHPVYKEKIV 225 (326)
T ss_dssp ECCS---SCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTB-SSCCSCHHHHHHHH
T ss_pred cCCC---ccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcC-ccccccHHHHHHHH
Confidence 6562 23678889999888 799999999999999999999999999999999863 43 3444554443
No 53
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.41 E-value=3e-12 Score=148.04 Aligned_cols=154 Identities=22% Similarity=0.257 Sum_probs=114.0
Q ss_pred ccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc
Q 012517 286 RMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA 365 (462)
Q Consensus 286 r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~ 365 (462)
+++.+.+.+.++++.+++.. .++||+||+.+.. .+..+|..+.++|+|+|+++|..-+ ... .+...
T Consensus 972 ~d~~s~edl~~~I~~Lk~~~--------~~~PV~VKlv~~~---gi~~~A~~a~~AGAD~IvVsG~eGG-Tga--sp~~~ 1037 (1479)
T 1ea0_A 972 HDIYSIEDLAQLIYDLKQIN--------PDAKVTVKLVSRS---GIGTIAAGVAKANADIILISGNSGG-TGA--SPQTS 1037 (1479)
T ss_dssp TTCSSHHHHHHHHHHHHHHC--------TTCEEEEEEECCT---THHHHHHHHHHTTCSEEEEECTTCC-CSS--EETTH
T ss_pred cCcCCHHHHHHHHHHHHHhC--------CCCCEEEEEcCCC---ChHHHHHHHHHcCCcEEEEcCCCCC-CCC--Cchhh
Confidence 55556677888888888762 3689999999864 3556788899999999999876311 000 00000
Q ss_pred cccCCCCCCcCccchHHHHHHHHHhc-----CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc-----------
Q 012517 366 KETGGLSGKPLLSLSNNILKEMYLLT-----RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG----------- 429 (462)
Q Consensus 366 ~~~GGlSG~~l~~~al~~v~~i~~~~-----~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~----------- 429 (462)
....|+ | ....+.++++.+ ..++|||+.|||.++.|+.+++.+||++||++|++++.
T Consensus 1038 ~~~~G~---P----t~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~ 1110 (1479)
T 1ea0_A 1038 IKFAGL---P----WEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHS 1110 (1479)
T ss_dssp HHHSCC---C----HHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTT
T ss_pred hcCCch---h----HHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccC
Confidence 011222 2 235555565543 34799999999999999999999999999999999761
Q ss_pred ----------CCC--------------hHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 430 ----------GPA--------------LIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 430 ----------GP~--------------~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
+|. ++..+.++|+++|...|++|++|++|..
T Consensus 1111 ~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~ 1165 (1479)
T 1ea0_A 1111 NTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRT 1165 (1479)
T ss_dssp TCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCG
T ss_pred CCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCch
Confidence 233 6889999999999999999999999864
No 54
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.39 E-value=6.7e-11 Score=118.99 Aligned_cols=140 Identities=18% Similarity=0.203 Sum_probs=99.7
Q ss_pred eEEEEecCCCC-CHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKT-SEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~-t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
+++||+..|.. .....+++++.+.... +|+|.+++.+| .++++.+++. ..|++
T Consensus 69 p~~v~l~v~~~~~~~~~~~~~~~~~~~g--~d~V~~~~g~p--------------~~~~~~l~~~----------gi~vi 122 (328)
T 2gjl_A 69 PFGVNLTLLPTQKPVPYAEYRAAIIEAG--IRVVETAGNDP--------------GEHIAEFRRH----------GVKVI 122 (328)
T ss_dssp CCEEEEEECCCSSCCCHHHHHHHHHHTT--CCEEEEEESCC--------------HHHHHHHHHT----------TCEEE
T ss_pred CeEEEEeccccccCccHHHHHHHHHhcC--CCEEEEcCCCc--------------HHHHHHHHHc----------CCCEE
Confidence 56777766410 0112345666555554 99999998765 2455555532 57898
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
++++. .+.+..+.+.|+|+|++.+.. .||.+|.. ....++.++++++.+ ++|||+
T Consensus 123 ~~v~t-------~~~a~~~~~~GaD~i~v~g~~---------------~GG~~G~~-~~~~~~~l~~v~~~~--~iPvia 177 (328)
T 2gjl_A 123 HKCTA-------VRHALKAERLGVDAVSIDGFE---------------CAGHPGED-DIPGLVLLPAAANRL--RVPIIA 177 (328)
T ss_dssp EEESS-------HHHHHHHHHTTCSEEEEECTT---------------CSBCCCSS-CCCHHHHHHHHHTTC--CSCEEE
T ss_pred eeCCC-------HHHHHHHHHcCCCEEEEECCC---------------CCcCCCCc-cccHHHHHHHHHHhc--CCCEEE
Confidence 88742 234667888999999987542 24454432 124678889999888 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC
Q 012517 400 CGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
.|||.+++|+.+++.+||+.|+++|+|+. .++
T Consensus 178 aGGI~~~~~v~~al~~GAdgV~vGs~~~~-~~e 209 (328)
T 2gjl_A 178 SGGFADGRGLVAALALGADAINMGTRFLA-TRE 209 (328)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEESHHHHT-SSS
T ss_pred ECCCCCHHHHHHHHHcCCCEEEECHHHHc-Ccc
Confidence 99999999999999999999999999976 455
No 55
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.36 E-value=5.2e-11 Score=121.80 Aligned_cols=126 Identities=21% Similarity=0.271 Sum_probs=90.6
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
++++.+.... +|++.+++.+|. .++++.+++. +.|+++++. + .+.+..
T Consensus 113 ~~~~~~~~~g--~~~V~~~~g~~~-------------~~~i~~~~~~----------g~~v~~~v~---t----~~~a~~ 160 (369)
T 3bw2_A 113 AKLAVLLDDP--VPVVSFHFGVPD-------------REVIARLRRA----------GTLTLVTAT---T----PEEARA 160 (369)
T ss_dssp HHHHHHHHSC--CSEEEEESSCCC-------------HHHHHHHHHT----------TCEEEEEES---S----HHHHHH
T ss_pred HHHHHHHhcC--CCEEEEeCCCCc-------------HHHHHHHHHC----------CCeEEEECC---C----HHHHHH
Confidence 4444444443 999999998873 2455555542 579999884 2 234678
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCc-------Cccc-hHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKP-------LLSL-SNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~-------l~~~-al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+.+.|+|+|++.+... ||..|.. -.+. .++.++++++.+ ++|||+.|||.+++++
T Consensus 161 a~~~GaD~i~v~g~~~---------------GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~ 223 (369)
T 3bw2_A 161 VEAAGADAVIAQGVEA---------------GGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQI 223 (369)
T ss_dssp HHHTTCSEEEEECTTC---------------SEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHH
T ss_pred HHHcCCCEEEEeCCCc---------------CCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHH
Confidence 8899999999976531 2222211 0012 378888998887 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCCh
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPAL 433 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~ 433 (462)
.+++++|||.|+++|+++. .|+.
T Consensus 224 ~~~l~~GAd~V~vGs~~~~-~~e~ 246 (369)
T 3bw2_A 224 AAVLAAGADAAQLGTAFLA-TDES 246 (369)
T ss_dssp HHHHHTTCSEEEESHHHHT-STTC
T ss_pred HHHHHcCCCEEEEChHHhC-Cccc
Confidence 9999999999999999986 4654
No 56
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.36 E-value=5.2e-12 Score=146.33 Aligned_cols=154 Identities=18% Similarity=0.220 Sum_probs=112.9
Q ss_pred cccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc
Q 012517 285 LRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV 364 (462)
Q Consensus 285 lr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~ 364 (462)
.+++.+.+.+.++++.+++.. .++||+||+.+.. .+...|..+.++|+|+|++.|..-+ .. ..+.
T Consensus 1006 ~~d~~s~edl~~~I~~Lk~~~--------~~~PV~VKlv~~~---gi~~~A~~a~kAGAD~IvVsG~eGG-Tg---asp~ 1070 (1520)
T 1ofd_A 1006 HHDIYSIEDLAQLIYDLHQIN--------PEAQVSVKLVAEI---GIGTIAAGVAKANADIIQISGHDGG-TG---ASPL 1070 (1520)
T ss_dssp CTTCSSHHHHHHHHHHHHHHC--------TTSEEEEEEECST---THHHHHHHHHHTTCSEEEEECTTCC-CS---SEEH
T ss_pred CcCcCCHHHHHHHHHHHHHhC--------CCCCEEEEecCCC---ChHHHHHHHHHcCCCEEEEeCCCCc-cC---CCcc
Confidence 355666677888888888762 3789999999864 3456788899999999999876411 00 0000
Q ss_pred -ccccCCCCCCcCccchHHHHHHHHHhc-----CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc---------
Q 012517 365 -AKETGGLSGKPLLSLSNNILKEMYLLT-----RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG--------- 429 (462)
Q Consensus 365 -~~~~GGlSG~~l~~~al~~v~~i~~~~-----~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~--------- 429 (462)
.....|+ | ....+.++++.+ ..++|||+.|||.++.|+.+++.+||++||++|++++.
T Consensus 1071 ~~~~~~Gl---P----t~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~C 1143 (1520)
T 1ofd_A 1071 SSIKHAGS---P----WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVC 1143 (1520)
T ss_dssp HHHHHBCC---C----HHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCG
T ss_pred hhhcCCch---h----HHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhc
Confidence 0011121 2 234555555543 33799999999999999999999999999999999762
Q ss_pred ------------CCC--------------hHHHHHHHHHHHHHHcCCCCHHHhhccc
Q 012517 430 ------------GPA--------------LIPQIKAELAECLERDGFKSIIEAVGAD 460 (462)
Q Consensus 430 ------------GP~--------------~i~~i~~~L~~~l~~~G~~si~e~~G~~ 460 (462)
+|. ++..+.++|+++|...|++|++|++|..
T Consensus 1144 h~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~ 1200 (1520)
T 1ofd_A 1144 HTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRT 1200 (1520)
T ss_dssp GGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCG
T ss_pred cCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcc
Confidence 111 6888999999999999999999999754
No 57
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.33 E-value=3.4e-11 Score=128.35 Aligned_cols=178 Identities=18% Similarity=0.185 Sum_probs=121.6
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
.++.+++.+ ++ ..+.++.+..+ .+|.+++|.++-+ ++...++++++++.. .+.||++
T Consensus 245 ~vga~vG~~---~~-~~~~a~~~~~a--G~d~v~i~~~~G~---------~~~~~~~i~~i~~~~--------~~~pvi~ 301 (514)
T 1jcn_A 245 LCGAAVGTR---ED-DKYRLDLLTQA--GVDVIVLDSSQGN---------SVYQIAMVHYIKQKY--------PHLQVIG 301 (514)
T ss_dssp CCEEEECSS---TT-HHHHHHHHHHT--TCSEEEECCSCCC---------SHHHHHHHHHHHHHC--------TTCEEEE
T ss_pred eeeeEecCc---hh-hHHHHHHHHHc--CCCEEEeeccCCc---------chhHHHHHHHHHHhC--------CCCceEe
Confidence 467777653 22 11333333333 3999999987632 234567788887652 2689998
Q ss_pred EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe
Q 012517 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC 400 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~ 400 (462)
|-- .+ .+.++.+.++|+|+|++++..-+. ... . ...|. |.| ...++..++++++.+ ++|||++
T Consensus 302 ~~v--~t----~~~a~~l~~aGad~I~vg~~~G~~-~~t---~---~~~~~-g~~-~~~~~~~~~~~~~~~--~ipVia~ 364 (514)
T 1jcn_A 302 GNV--VT----AAQAKNLIDAGVDGLRVGMGCGSI-CIT---Q---EVMAC-GRP-QGTAVYKVAEYARRF--GVPIIAD 364 (514)
T ss_dssp EEE--CS----HHHHHHHHHHTCSEEEECSSCSCC-BTT---B---CCCSC-CCC-HHHHHHHHHHHHGGG--TCCEEEE
T ss_pred ccc--ch----HHHHHHHHHcCCCEEEECCCCCcc-ccc---c---cccCC-Ccc-chhHHHHHHHHHhhC--CCCEEEE
Confidence 722 12 355888999999999995421100 000 0 01111 211 234678888888888 7999999
Q ss_pred cCCCCHHHHHHHHHhCCCEEEEchhhhh------------------------------------------------cCC-
Q 012517 401 GGISSGEDAYRKIRAGATLVQLYTAFAY------------------------------------------------GGP- 431 (462)
Q Consensus 401 GGI~s~~dA~e~i~aGAd~Vqv~Tali~------------------------------------------------~GP- 431 (462)
|||.+++|+.+++.+||++|+++|+|+. +|+
T Consensus 365 GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 444 (514)
T 1jcn_A 365 GGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVS 444 (514)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC---------------------------------------------
T ss_pred CCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccceecccce
Confidence 9999999999999999999999998853 121
Q ss_pred ----------ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 432 ----------ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 432 ----------~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
.++.++..+|+..|...|++|++|+..
T Consensus 445 ~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 481 (514)
T 1jcn_A 445 GSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRS 481 (514)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHH
T ss_pred ecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHh
Confidence 356688889999999999999999975
No 58
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.31 E-value=8e-10 Score=112.98 Aligned_cols=241 Identities=20% Similarity=0.256 Sum_probs=145.8
Q ss_pred CCCCCCccEEEc-CeeeCCcEEeCC-CCCCCHHHHHHHHc-CCccEEEecccccCCCCCCCCCceeeecCCCcccccCCC
Q 012517 120 RPDPAILGLEVW-GRKFSNPLGLAA-GFDKNAEAVEGLLG-LGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGF 196 (462)
Q Consensus 120 ~~~~~~L~v~v~-Gl~f~NPiglAA-G~dk~~e~~~~l~~-lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~ 196 (462)
.+++.+|++++. .+.++-||..|+ ..-.+.+...++++ .|+|++.. +.+
T Consensus 29 ~~~~vdl~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~-~~s--------------------------- 80 (366)
T 4fo4_A 29 LPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHK-NMS--------------------------- 80 (366)
T ss_dssp CGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECS-SSC---------------------------
T ss_pred ChhhcccceecccccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeec-CCC---------------------------
Confidence 345788999997 799999988776 22345677766665 45888741 111
Q ss_pred CchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEe
Q 012517 197 NSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN 276 (462)
Q Consensus 197 nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiN 276 (462)
.+......+++++.. +..+++.++.+... .+.++.+.... +|+|+||
T Consensus 81 -~e~~~~~i~~vk~~~--------------------------~l~vga~vg~~~~~----~~~~~~lieaG--vd~I~id 127 (366)
T 4fo4_A 81 -IEQQAAQVHQVKISG--------------------------GLRVGAAVGAAPGN----EERVKALVEAG--VDVLLID 127 (366)
T ss_dssp -HHHHHHHHHHHHTTT--------------------------SCCCEEECCSCTTC----HHHHHHHHHTT--CSEEEEE
T ss_pred -HHHHHHHHHHHHhcC--------------------------ceeEEEEeccChhH----HHHHHHHHhCC--CCEEEEe
Confidence 122223333333210 11355555543212 24444444444 9999998
Q ss_pred ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCC
Q 012517 277 VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRP 356 (462)
Q Consensus 277 vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~ 356 (462)
.+- | ..+.+.+.++++++.. .+.||++.--. + .+.++.+.++|+|+|++... +
T Consensus 128 ta~----G-----~~~~~~~~I~~ik~~~--------p~v~Vi~G~v~--t----~e~A~~a~~aGAD~I~vG~g----p 180 (366)
T 4fo4_A 128 SSH----G-----HSEGVLQRIRETRAAY--------PHLEIIGGNVA--T----AEGARALIEAGVSAVKVGIG----P 180 (366)
T ss_dssp CSC----T-----TSHHHHHHHHHHHHHC--------TTCEEEEEEEC--S----HHHHHHHHHHTCSEEEECSS----C
T ss_pred CCC----C-----CCHHHHHHHHHHHHhc--------CCCceEeeeeC--C----HHHHHHHHHcCCCEEEEecC----C
Confidence 542 1 1234455666666542 36788875322 2 34577788999999998311 1
Q ss_pred CCCCCCCcccccCCCCCCcCccchHHHHHHHHH---hcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh------
Q 012517 357 DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL---LTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA------ 427 (462)
Q Consensus 357 ~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~---~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali------ 427 (462)
.... ...... | .|.| .+..+.++++ .+ ++|||+.|||.+++|+.+++.+||+.||++|.|+
T Consensus 181 Gs~~--~tr~~~-g-~g~p----~~~~l~~v~~~~~~~--~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp 250 (366)
T 4fo4_A 181 GSIC--TTRIVT-G-VGVP----QITAIADAAGVANEY--GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAP 250 (366)
T ss_dssp STTB--CHHHHH-C-CCCC----HHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSS
T ss_pred CCCC--Cccccc-C-cccc----hHHHHHHHHHHHhhc--CCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCC
Confidence 0000 000000 0 1222 3344555554 44 6999999999999999999999999999999986
Q ss_pred -------------hcCC----------------------------------------ChHHHHHHHHHHHHHHcCCCCHH
Q 012517 428 -------------YGGP----------------------------------------ALIPQIKAELAECLERDGFKSII 454 (462)
Q Consensus 428 -------------~~GP----------------------------------------~~i~~i~~~L~~~l~~~G~~si~ 454 (462)
|.|. +++.++..+|+.-|.--|.++|.
T Consensus 251 ~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~ 330 (366)
T 4fo4_A 251 GEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVE 330 (366)
T ss_dssp SCCEEETTEEEEEEECTTSHHHHCC---------------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHH
T ss_pred chhhhhCCceeEEeeccccHHHHhcccccchhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHH
Confidence 2122 24567777888888888999999
Q ss_pred Hhhc
Q 012517 455 EAVG 458 (462)
Q Consensus 455 e~~G 458 (462)
|+.-
T Consensus 331 ~~~~ 334 (366)
T 4fo4_A 331 DLRT 334 (366)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
No 59
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.26 E-value=3.5e-10 Score=116.74 Aligned_cols=132 Identities=16% Similarity=0.223 Sum_probs=85.3
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
++++.+-..+ +|+|+++.+..+ ++.+.++++++++. .+.||+++.-. + .+.++.
T Consensus 147 e~~~~lveaG--vdvIvldta~G~---------~~~~~e~I~~ik~~---------~~i~Vi~g~V~--t----~e~A~~ 200 (400)
T 3ffs_A 147 ERAKLLVEAG--VDVIVLDSAHGH---------SLNIIRTLKEIKSK---------MNIDVIVGNVV--T----EEATKE 200 (400)
T ss_dssp HHHHHHHHHT--CSEEEECCSCCS---------BHHHHHHHHHHHTT---------CCCEEEEEEEC--S----HHHHHH
T ss_pred HHHHHHHHcC--CCEEEEeCCCCC---------cccHHHHHHHHHhc---------CCCeEEEeecC--C----HHHHHH
Confidence 5555555544 999999865321 23455666666543 26899986432 2 356788
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEEEecCCCCHHHHHHHHHhC
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
+.++|+|+|++.++- +..... ....|. |.| .+..+.++++.+. .++|||+.|||.+++|+.+++.+|
T Consensus 201 a~~aGAD~I~vG~g~-Gs~~~t------r~~~g~-g~p----~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalG 268 (400)
T 3ffs_A 201 LIENGADGIKVGIGP-GSICTT------RIVAGV-GVP----QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVG 268 (400)
T ss_dssp HHHTTCSEEEECC----------------CCSCB-CCC----HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTT
T ss_pred HHHcCCCEEEEeCCC-CcCccc------cccccc-chh----HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC
Confidence 889999999995431 110000 001111 222 3455666665532 279999999999999999999999
Q ss_pred CCEEEEchhhh
Q 012517 417 ATLVQLYTAFA 427 (462)
Q Consensus 417 Ad~Vqv~Tali 427 (462)
|+.||++|+|+
T Consensus 269 Ad~V~vGt~f~ 279 (400)
T 3ffs_A 269 ASSVMIGSILA 279 (400)
T ss_dssp CSEEEECGGGT
T ss_pred CCEEEEChHHh
Confidence 99999999986
No 60
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.23 E-value=1.6e-09 Score=106.03 Aligned_cols=209 Identities=18% Similarity=0.121 Sum_probs=124.0
Q ss_pred cEEEcCeeeCCcEEeCCCCCCCH-HHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHH
Q 012517 127 GLEVWGRKFSNPLGLAAGFDKNA-EAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVA 205 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAAG~dk~~-e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~ 205 (462)
+++++|++|+||+.++.|-+.+. +..+.+.+.|.-.||+|- |+. ++ . +.+.+.+.
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~----pr~-~~----------~---------g~~~~~~~ 58 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAV----RRM-NI----------F---------EASQPNFL 58 (264)
T ss_dssp CEEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEET----TSS-TT----------C----------------C
T ss_pred CeEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcc----ccc-cc----------C---------CCCHHHHH
Confidence 57899999999999998765665 445667778999999983 211 10 0 12233333
Q ss_pred HHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCc
Q 012517 206 KRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGL 285 (462)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~gl 285 (462)
+.+++. +.++..|... ..+.++...|.+.++.+. .+|.+++++.. . .
T Consensus 59 ~~l~~~---------------------------~~~~~pn~~~-~~~~~~~~~f~~~a~~ag-g~~~i~l~i~~-d---~ 105 (264)
T 1xm3_A 59 EQLDLS---------------------------KYTLLPNTAG-ASTAEEAVRIARLAKASG-LCDMIKVEVIG-C---S 105 (264)
T ss_dssp TTCCGG---------------------------GSEEEEECTT-CSSHHHHHHHHHHHHHTT-CCSSEEECCBC-C---T
T ss_pred HHHHhc---------------------------CCeEcCCccc-cCCHHHHHHHHHHHHHcC-CCCeEEEeecC-C---C
Confidence 322211 0134456543 124553333444443331 37888888732 1 1
Q ss_pred ccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc
Q 012517 286 RMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA 365 (462)
Q Consensus 286 r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~ 365 (462)
..+ .+...++++.+++... ....++.-..++. +.++.+.+.|+|.|.......+.
T Consensus 106 ~~~--~~e~~~~~~~a~~~~~-------~g~~vi~~~~~~~------~~a~~~~~~gad~v~~~~~~~Gt---------- 160 (264)
T 1xm3_A 106 RSL--LPDPVETLKASEQLLE-------EGFIVLPYTSDDV------VLARKLEELGVHAIMPGASPIGS---------- 160 (264)
T ss_dssp TTC--CBCHHHHHHHHHHHHH-------TTCCEEEEECSCH------HHHHHHHHHTCSCBEECSSSTTC----------
T ss_pred ccc--ccchHHHHHHHHHHHC-------CCeEEEEEcCCCH------HHHHHHHHhCCCEEEECCcccCC----------
Confidence 111 1234566666665432 2445554455542 34677788899988332221110
Q ss_pred cccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 366 KETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 366 ~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
.. +++ ..+.++++++.. ++||++.|||.+++|+.+++++|||.|.++|+++.
T Consensus 161 -~~-~~~-------~~~~l~~i~~~~--~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 161 -GQ-GIL-------NPLNLSFIIEQA--KVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp -CC-CCS-------CHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred -CC-CCC-------CHHHHHHHHhcC--CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 00 122 145778888876 79999999999999999999999999999999974
No 61
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.20 E-value=5.1e-10 Score=118.70 Aligned_cols=177 Identities=20% Similarity=0.233 Sum_probs=120.2
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.+++.++.+ + |+.+.++.+.+ .+|+|++|.++++. ..+.++++++++.. .+.||+
T Consensus 219 ~v~aavG~~---~----~~~~~a~~l~~aG~d~I~id~a~g~~---------~~~~~~v~~i~~~~--------p~~~Vi 274 (490)
T 4avf_A 219 RVGAAVGTG---A----DTGERVAALVAAGVDVVVVDTAHGHS---------KGVIERVRWVKQTF--------PDVQVI 274 (490)
T ss_dssp CCEEEECSS---T----THHHHHHHHHHTTCSEEEEECSCCSB---------HHHHHHHHHHHHHC--------TTSEEE
T ss_pred eeeeeeccc---c----chHHHHHHHhhcccceEEecccCCcc---------hhHHHHHHHHHHHC--------CCceEE
Confidence 467777653 2 23333343333 49999999998763 34567777777652 257999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipII 398 (462)
++--. + .+.++.+.++|+|+|++.++..+. .......|+ |.| .+..+.++++.+. .++|||
T Consensus 275 ~g~v~--t----~e~a~~l~~aGaD~I~vg~g~Gs~-------~~t~~~~g~-g~p----~~~~l~~v~~~~~~~~iPVI 336 (490)
T 4avf_A 275 GGNIA--T----AEAAKALAEAGADAVKVGIGPGSI-------CTTRIVAGV-GVP----QISAIANVAAALEGTGVPLI 336 (490)
T ss_dssp EEEEC--S----HHHHHHHHHTTCSEEEECSSCSTT-------CHHHHHTCB-CCC----HHHHHHHHHHHHTTTTCCEE
T ss_pred EeeeC--c----HHHHHHHHHcCCCEEEECCCCCcC-------CCccccCCC-Ccc----HHHHHHHHHHHhccCCCcEE
Confidence 86221 1 345788999999999986532110 000011222 222 4566677776542 269999
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchhhhh-------------------cC-----------------------------
Q 012517 399 GCGGISSGEDAYRKIRAGATLVQLYTAFAY-------------------GG----------------------------- 430 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~-------------------~G----------------------------- 430 (462)
+.|||.+++|+.+++.+||++||++|+|.. .|
T Consensus 337 a~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~ 416 (490)
T 4avf_A 337 ADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLV 416 (490)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccccccccc
Confidence 999999999999999999999999999852 11
Q ss_pred ------------C--ChHHHHHHHHHHHHHHcCCCCHHHhhcc
Q 012517 431 ------------P--ALIPQIKAELAECLERDGFKSIIEAVGA 459 (462)
Q Consensus 431 ------------P--~~i~~i~~~L~~~l~~~G~~si~e~~G~ 459 (462)
+ +++.++..+|+.-|.--|.+++.|+.-.
T Consensus 417 ~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 417 PEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 1 3577788888999999999999999754
No 62
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.15 E-value=1.5e-09 Score=115.28 Aligned_cols=176 Identities=20% Similarity=0.253 Sum_probs=118.8
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.+++.++.+..+ .+.++.+.+ .+|.|+||.+||+. +.+.++++++++.. .+.||+
T Consensus 221 ~v~aavG~~~d~-------~~~a~~l~~aG~d~I~id~a~g~~---------~~~~~~i~~ir~~~--------p~~~Vi 276 (496)
T 4fxs_A 221 RVGAAVGAAPGN-------EERVKALVEAGVDVLLIDSSHGHS---------EGVLQRIRETRAAY--------PHLEII 276 (496)
T ss_dssp CCEEECCSSSCC-------HHHHHHHHHTTCSEEEEECSCTTS---------HHHHHHHHHHHHHC--------TTCCEE
T ss_pred eeeeeeccccch-------HHHHHHHHhccCceEEeccccccc---------hHHHHHHHHHHHHC--------CCceEE
Confidence 467777764222 222333322 49999999998753 34557777777652 368998
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipII 398 (462)
++--. + .+.++.+.++|+|+|++.++..+. . ......|+ |.| ....+.++.+.+. -++|||
T Consensus 277 ~g~v~--t----~e~a~~l~~aGaD~I~Vg~g~Gs~---~----~tr~~~g~-g~p----~~~~i~~v~~~~~~~~iPVI 338 (496)
T 4fxs_A 277 GGNVA--T----AEGARALIEAGVSAVKVGIGPGSI---C----TTRIVTGV-GVP----QITAIADAAGVANEYGIPVI 338 (496)
T ss_dssp EEEEC--S----HHHHHHHHHHTCSEEEECSSCCTT---B----CHHHHHCC-CCC----HHHHHHHHHHHHGGGTCCEE
T ss_pred EcccC--c----HHHHHHHHHhCCCEEEECCCCCcC---c----ccccccCC-Ccc----HHHHHHHHHHHhccCCCeEE
Confidence 85221 1 355788889999999987542110 0 00011122 222 3445555555331 159999
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchhhhh-------------------c------------------------------
Q 012517 399 GCGGISSGEDAYRKIRAGATLVQLYTAFAY-------------------G------------------------------ 429 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~-------------------~------------------------------ 429 (462)
+.|||.+++|+.+++.+|||+||++|+|.. .
T Consensus 339 a~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg 418 (496)
T 4fxs_A 339 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 418 (496)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSB
T ss_pred EeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCc
Confidence 999999999999999999999999999852 1
Q ss_pred --------CC--ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 430 --------GP--ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 430 --------GP--~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
|| +++.++..+|+.-|.-.|.++|.|+.-
T Consensus 419 ~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~ 457 (496)
T 4fxs_A 419 IEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRT 457 (496)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHh
Confidence 11 458888999999999999999999974
No 63
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.12 E-value=1e-09 Score=116.33 Aligned_cols=177 Identities=19% Similarity=0.262 Sum_probs=114.8
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.++.+++.. + ++.+.++.+.+ .+|.+++++.. | ......+.++++++.. .++||+
T Consensus 227 ~vga~ig~~----~---~~~~~a~~l~~aGvd~v~i~~~~----G-----~~~~~~e~i~~i~~~~--------p~~pvi 282 (494)
T 1vrd_A 227 LVGAAVGTS----P---ETMERVEKLVKAGVDVIVIDTAH----G-----HSRRVIETLEMIKADY--------PDLPVV 282 (494)
T ss_dssp CCEEEECSS----T---THHHHHHHHHHTTCSEEEECCSC----C-----SSHHHHHHHHHHHHHC--------TTSCEE
T ss_pred ccccccCcC----H---hHHHHHHHHHHhCCCEEEEEecC----C-----chHHHHHHHHHHHHHC--------CCceEE
Confidence 466666532 1 33344444443 48999998742 2 1234557777777652 258998
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
++-- .+ .+.++.+.+.|+|+|+++|..-+. .......|. |.|. ..++..+.+..+.+ ++|||+
T Consensus 283 ~g~~--~t----~e~a~~l~~~G~d~I~v~~~~G~~-------~~~~~~~~~-g~p~-~~~l~~v~~~~~~~--~ipvia 345 (494)
T 1vrd_A 283 AGNV--AT----PEGTEALIKAGADAVKVGVGPGSI-------CTTRVVAGV-GVPQ-LTAVMECSEVARKY--DVPIIA 345 (494)
T ss_dssp EEEE--CS----HHHHHHHHHTTCSEEEECSSCSTT-------CHHHHHHCC-CCCH-HHHHHHHHHHHHTT--TCCEEE
T ss_pred eCCc--CC----HHHHHHHHHcCCCEEEEcCCCCcc-------ccccccCCC-CccH-HHHHHHHHHHHhhc--CCCEEE
Confidence 8742 22 234577889999999997643110 000011122 2221 11233333333334 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchhhhh----------------------------------------------cCC--
Q 012517 400 CGGISSGEDAYRKIRAGATLVQLYTAFAY----------------------------------------------GGP-- 431 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aGAd~Vqv~Tali~----------------------------------------------~GP-- 431 (462)
+|||.+++|+.+++.+|||+|+++|+|+. +|.
T Consensus 346 ~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~~ 425 (494)
T 1vrd_A 346 DGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEG 425 (494)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CBC
T ss_pred ECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcceE
Confidence 99999999999999999999999999961 221
Q ss_pred ---------ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 432 ---------ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 432 ---------~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
.++..+..+|+..|...|+.+++|+..
T Consensus 426 ~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~ 461 (494)
T 1vrd_A 426 MVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQE 461 (494)
T ss_dssp CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHH
T ss_pred ccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHh
Confidence 457788889999999999999999975
No 64
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.07 E-value=3.1e-09 Score=113.30 Aligned_cols=176 Identities=19% Similarity=0.240 Sum_probs=114.5
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++++.++.. + |..+.++.+.+ .+|.+++|.++|+. ..+.++++++++.. .+.||+
T Consensus 246 ~V~aavg~~---~----d~~era~aLveaGvd~I~Id~a~g~~---------~~v~~~i~~i~~~~--------~~~~vi 301 (511)
T 3usb_A 246 LVGAAVGVT---A----DAMTRIDALVKASVDAIVLDTAHGHS---------QGVIDKVKEVRAKY--------PSLNII 301 (511)
T ss_dssp CCEEEECSS---T----THHHHHHHHHHTTCSEEEEECSCTTS---------HHHHHHHHHHHHHC--------TTSEEE
T ss_pred eeeeeeeec---c----chHHHHHHHHhhccceEEecccccch---------hhhhhHHHHHHHhC--------CCceEE
Confidence 466666543 2 22333333333 49999999887653 34556777776642 357898
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC-CccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG-KIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~-~ipII 398 (462)
++--. + .+.++.+.++|+|+|++.++..+. .......|+..+ ....+.++++.+.. ++|||
T Consensus 302 ~g~v~--t----~e~a~~~~~aGad~i~vg~g~gsi-------~~~~~~~g~g~p-----~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 302 AGNVA--T----AEATKALIEAGANVVKVGIGPGSI-------CTTRVVAGVGVP-----QLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp EEEEC--S----HHHHHHHHHHTCSEEEECSSCSTT-------CCHHHHHCCCCC-----HHHHHHHHHHHHHTTTCCEE
T ss_pred eeeec--c----HHHHHHHHHhCCCEEEECCCCccc-------cccccccCCCCC-----cHHHHHHHHHHHHhCCCcEE
Confidence 86432 1 355788899999999985432110 000011122222 23444444333321 69999
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchhhhh-------------------cC-----------------------------
Q 012517 399 GCGGISSGEDAYRKIRAGATLVQLYTAFAY-------------------GG----------------------------- 430 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~-------------------~G----------------------------- 430 (462)
+.|||.+++|+.+++.+||++|+++|+|+. .|
T Consensus 364 a~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~ 443 (511)
T 3usb_A 364 ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIE 443 (511)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcE
Confidence 999999999999999999999999999732 11
Q ss_pred -------C--ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 431 -------P--ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 431 -------P--~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
+ .++..+..+|+.-|.-.|.+++.|+.-
T Consensus 444 ~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~ 480 (511)
T 3usb_A 444 GRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRE 480 (511)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHh
Confidence 0 246778889999999999999999964
No 65
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.05 E-value=3e-10 Score=113.25 Aligned_cols=81 Identities=16% Similarity=0.240 Sum_probs=67.4
Q ss_pred chHHHHHHHHHhcCCCccEE--EecCCCCHHHHHHHHHhCCCEEEEchhhhhc-CC-ChHHHHHHHHHHHHHHcCCCCHH
Q 012517 379 LSNNILKEMYLLTRGKIPLI--GCGGISSGEDAYRKIRAGATLVQLYTAFAYG-GP-ALIPQIKAELAECLERDGFKSII 454 (462)
Q Consensus 379 ~al~~v~~i~~~~~~~ipII--g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~-GP-~~i~~i~~~L~~~l~~~G~~si~ 454 (462)
..++.++++++.+ ++||+ +.|||.|++|+.+++++||+.|+++|+++.. +| ..++++++.+.+++..+++.+++
T Consensus 194 ~~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~ 271 (305)
T 2nv1_A 194 APYELLLQIKKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELS 271 (305)
T ss_dssp CCHHHHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTTTCHHHHHHHT
T ss_pred ccHHHHHHHHHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHHhcChhhHHHHH
Confidence 4568888998876 79998 9999999999999999999999999999753 35 37788888898899889988899
Q ss_pred HhhcccC
Q 012517 455 EAVGADY 461 (462)
Q Consensus 455 e~~G~~~ 461 (462)
+.+|...
T Consensus 272 ~~~g~~~ 278 (305)
T 2nv1_A 272 KELGTAM 278 (305)
T ss_dssp SCC----
T ss_pred HHhhhhh
Confidence 8888543
No 66
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.98 E-value=4.9e-09 Score=100.78 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=114.5
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEe--ccCCCCCCcc-------ccc---CchHHHHHHHHHHHHHHhh
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVIN--VSSPNTPGLR-------MLQ---GRKQLKDLVKKVQAARDEM 308 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiN--vSsPnt~glr-------~lq---~~~~l~~ll~aV~~~~~~~ 308 (462)
.+..++.....+.+ ++.+.++.+.+.+|+||++ +|+|...|-. .++ +.....++++++++.
T Consensus 6 ~~~~~i~~~~~~~~---~~~~~a~~~~~~ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~---- 78 (248)
T 1geq_A 6 SLIPYLTAGDPDKQ---STLNFLLALDEYAGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRH---- 78 (248)
T ss_dssp EEEEEEETTSSCHH---HHHHHHHHHGGGBSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT----
T ss_pred cEEEEEeCCCCCHH---HHHHHHHHHHHcCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh----
Confidence 57778854322324 5566666665449999999 7888876531 111 223345555555542
Q ss_pred ccCCCCCCCEEEEecCCC-ChhhHHHHHHHHHHcCCcEEEEecCCccCC----------CC-----CC-CCC------c-
Q 012517 309 QWGEEGPPPLLVKIAPDL-SKEDLEDIAAVAVALRLDGLIISNTTISRP----------DP-----VS-KNP------V- 364 (462)
Q Consensus 309 ~~~~~~~~Pv~vKispdl-~~~~~~~ia~~~~~~GvdgIivsNTt~~r~----------~~-----~~-~~~------~- 364 (462)
.+.||.+..-.+. -...+.+.++.+.+.|+|+|++.+...... +. +. ..+ .
T Consensus 79 -----~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~ 153 (248)
T 1geq_A 79 -----SSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 153 (248)
T ss_dssp -----CCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHH
T ss_pred -----CCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHH
Confidence 3578888762110 001235788889999999999875332100 00 00 000 0
Q ss_pred --c------cccCCCCCCc--CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc---CC
Q 012517 365 --A------KETGGLSGKP--LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG---GP 431 (462)
Q Consensus 365 --~------~~~GGlSG~~--l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~---GP 431 (462)
. ...-|.+|.. ..+..++.++++++.+ ++||++.|||++++++.+++++||+.|.++|+++.. +|
T Consensus 154 ~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~ 231 (248)
T 1geq_A 154 DMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKG 231 (248)
T ss_dssp HHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHG
T ss_pred hcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhCh
Confidence 0 0012223332 3345678999999988 799999999999999999999999999999999642 33
Q ss_pred ChHHHHHHHHHHHH
Q 012517 432 ALIPQIKAELAECL 445 (462)
Q Consensus 432 ~~i~~i~~~L~~~l 445 (462)
.-++++.+.+++.|
T Consensus 232 ~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 232 REATEFLKKKVEEL 245 (248)
T ss_dssp GGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33444444444433
No 67
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.96 E-value=4.3e-07 Score=87.81 Aligned_cols=211 Identities=15% Similarity=0.141 Sum_probs=129.2
Q ss_pred cEEEcCeeeCCcEEeCCC-CCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHH
Q 012517 127 GLEVWGRKFSNPLGLAAG-FDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVA 205 (462)
Q Consensus 127 ~v~v~Gl~f~NPiglAAG-~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~ 205 (462)
+..+.|.+|.+++.+.-| |.....+.+.+...|.-.|+|-- +-. | +. + +.+.+.+.
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky~~~~~~~~a~~asg~e~vtva~---rR~--~-------~~--~---------~~~~~~~~ 66 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAV---RRT--N-------IG--Q---------NPDEPNLL 66 (265)
T ss_dssp CEEETTEEESCCEEECCSCSSSHHHHHHHHHHSCCSEEEEEG---GGC--C-------C---------------------
T ss_pred CeEECCEEeecceEEecCCCCCHHHHHHHHHHhCCCeEEEEE---Eee--c-------cc--c---------CCCcchHH
Confidence 478999999999999988 55555666667888998886632 111 0 00 0 01122333
Q ss_pred HHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCc
Q 012517 206 KRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGL 285 (462)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~gl 285 (462)
+.|.+. ...+--|-.+ +.|.+++--.++.++.+.-..|+|-+-+.+-+.-
T Consensus 67 ~~i~~~---------------------------~~~~lpNTag-~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~-- 116 (265)
T 1wv2_A 67 DVIPPD---------------------------RYTILPNTAG-CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKT-- 116 (265)
T ss_dssp ---CTT---------------------------TSEEEEECTT-CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTT--
T ss_pred hhhhhc---------------------------CCEECCcCCC-CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccc--
Confidence 333210 0134455543 3455533344444444222478999988653311
Q ss_pred ccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc
Q 012517 286 RMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA 365 (462)
Q Consensus 286 r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~ 365 (462)
.+.+ ..+.+++.++..+ ..+.++.-+.+| ..+++.+++.|++.|......
T Consensus 117 -llpD---~~~tv~aa~~L~~-------~Gf~Vlpy~~dd------~~~akrl~~~G~~aVmPlg~p------------- 166 (265)
T 1wv2_A 117 -LFPN---VVETLKAAEQLVK-------DGFDVMVYTSDD------PIIARQLAEIGCIAVMPLAGL------------- 166 (265)
T ss_dssp -CCBC---HHHHHHHHHHHHT-------TTCEEEEEECSC------HHHHHHHHHSCCSEEEECSSS-------------
T ss_pred -cCcC---HHHHHHHHHHHHH-------CCCEEEEEeCCC------HHHHHHHHHhCCCEEEeCCcc-------------
Confidence 1223 3344555544432 356777667776 468999999999998542211
Q ss_pred cccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 366 KETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 366 ~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
.|+ |..+. ..++|+.+++.. ++|||.-|||.+++||.++++.|||.|+++|++..
T Consensus 167 --IGs--G~Gi~--~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 167 --IGS--GLGIC--NPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp --TTC--CCCCS--CHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred --CCC--CCCcC--CHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 111 22222 367889999876 79999999999999999999999999999999963
No 68
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.86 E-value=1.7e-07 Score=91.02 Aligned_cols=157 Identities=17% Similarity=0.176 Sum_probs=94.3
Q ss_pred HHHHHHHHHcc-cCcEEEEecc--CCCCCCcc-------ccc---CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecC
Q 012517 258 DYVQGVHTLSQ-YADYLVINVS--SPNTPGLR-------MLQ---GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAP 324 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvS--sPnt~glr-------~lq---~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKisp 324 (462)
++.+.++.+.+ .+|+||+++. .|...|-- .++ +.+...++++++++. .+.|+.+-...
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~---------~~~Pv~~m~~~ 103 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE---------LSCPVVLLSYY 103 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG---------CSSCEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---------CCCCEEEEecC
Confidence 44555555544 3999999874 44443311 111 223344555555432 36898885322
Q ss_pred CCChhhHHHHHHHHHHcCCcEEEEecCCccCCC---------C------C-CCCC-------------c--ccccCCCCC
Q 012517 325 DLSKEDLEDIAAVAVALRLDGLIISNTTISRPD---------P------V-SKNP-------------V--AKETGGLSG 373 (462)
Q Consensus 325 dl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~---------~------~-~~~~-------------~--~~~~GGlSG 373 (462)
+. ......+.+.++|+|||++.+....... . . +..+ . .....|++|
T Consensus 104 ~~---~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG 180 (262)
T 1rd5_A 104 KP---IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG 180 (262)
T ss_dssp HH---HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBC
T ss_pred cH---HHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCC
Confidence 20 0001123377888888887654321100 0 0 0000 0 001245566
Q ss_pred C--cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 374 K--PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 374 ~--~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
. ...+...+.++++++.+ ++||++.|||.|++++.+++++|||.|.++|+++.
T Consensus 181 ~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 181 PRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp TTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 5 44455678899999988 79999999999999999999999999999999864
No 69
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.85 E-value=1.8e-08 Score=96.33 Aligned_cols=90 Identities=23% Similarity=0.256 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+++.|++.|++++.+. .|.++|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~--------------~~~~~g~-----~~~~~~~l~~~~--~ipvia~GGI~~~~d~ 208 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITK--------------DGTLGGP-----NLDLLAGVADRT--DAPVIASGGVSSLDDL 208 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTT--------------TTTTSCC-----CHHHHHHHHTTC--SSCEEEESCCCSHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEecCC--------------ccccCCC-----CHHHHHHHHHhC--CCCEEEECCCCCHHHH
Confidence 567888999999999999887642 1233332 467888898887 7999999999999999
Q ss_pred HHHHHh---CCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRA---GATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~a---GAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++ ||+.|+++|+++ .+|..+.++++.+
T Consensus 209 ~~~~~~~~~Gad~v~vG~al~-~~~~~~~~~~~~~ 242 (244)
T 2y88_A 209 RAIATLTHRGVEGAIVGKALY-ARRFTLPQALAAV 242 (244)
T ss_dssp HHHHTTGGGTEEEEEECHHHH-TTSSCHHHHHHHT
T ss_pred HHHHhhccCCCCEEEEcHHHH-CCCcCHHHHHHHh
Confidence 999998 999999999996 5798888877654
No 70
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.84 E-value=5.5e-09 Score=103.49 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=68.3
Q ss_pred chHHHHHHHHHhcCCCccEE--EecCCCCHHHHHHHHHhCCCEEEEchhhhhc-CC-ChHHHHHHHHHHHHHHcCCCCHH
Q 012517 379 LSNNILKEMYLLTRGKIPLI--GCGGISSGEDAYRKIRAGATLVQLYTAFAYG-GP-ALIPQIKAELAECLERDGFKSII 454 (462)
Q Consensus 379 ~al~~v~~i~~~~~~~ipII--g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~-GP-~~i~~i~~~L~~~l~~~G~~si~ 454 (462)
..++.++++++.+ ++|+| +.|||.|++|+.+++++||+.|+++|+++.. +| ..++++++.+.+++..+++.+++
T Consensus 194 ~~~~~i~~l~~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~~~~~~~~~~~~ 271 (297)
T 2zbt_A 194 APFELVKWVHDHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEVS 271 (297)
T ss_dssp CCHHHHHHHHHHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred hhHHHHHHHHHhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHHHhchHhhhHHH
Confidence 4567888998887 68988 9999999999999999999999999999642 34 36777777888888888999999
Q ss_pred HhhcccC
Q 012517 455 EAVGADY 461 (462)
Q Consensus 455 e~~G~~~ 461 (462)
|++|.++
T Consensus 272 ~~~g~~~ 278 (297)
T 2zbt_A 272 EDLGEPM 278 (297)
T ss_dssp TTCCCCC
T ss_pred HhcCcee
Confidence 9998653
No 71
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.83 E-value=4.4e-08 Score=93.29 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=80.4
Q ss_pred EEEEecCCCC--hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 318 LLVKIAPDLS--KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 318 v~vKispdl~--~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
+.|++..... ..+..+.++.+.+.|+|.|.+++... .|...|. .++.++++++.+ ++
T Consensus 141 ~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~--------------~g~~~~~-----~~~~i~~l~~~~--~~ 199 (253)
T 1h5y_A 141 YEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDR--------------DGTGLGY-----DVELIRRVADSV--RI 199 (253)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTT--------------TTTCSCC-----CHHHHHHHHHHC--SS
T ss_pred EEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccC--------------CCCcCcC-----CHHHHHHHHHhc--CC
Confidence 5666654321 12566778999999999999876431 1112222 467888998887 79
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
||++.|||.+++|+.+++++||+.|+++|+++. ++.-+ +++.++|+++||.
T Consensus 200 pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~-~~~~~----~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 200 PVIASGGAGRVEHFYEAAAAGADAVLAASLFHF-RVLSI----AQVKRYLKERGVE 250 (253)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT-TSSCH----HHHHHHHHHTTCB
T ss_pred CEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc-CCCCH----HHHHHHHHHcCCC
Confidence 999999999999999999999999999999965 44333 4556778888874
No 72
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.81 E-value=1.7e-07 Score=89.86 Aligned_cols=127 Identities=16% Similarity=0.078 Sum_probs=87.8
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|++.++...- .+++.+.++++.+++. ..++++.+.. .+.++.+++.|+|.|.+
T Consensus 101 Gad~V~l~~~~~--------~~p~~l~~~i~~~~~~----------g~~v~~~v~t-------~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 101 GAAIIAVDGTAR--------QRPVAVEALLARIHHH----------HLLTMADCSS-------VDDGLACQRLGADIIGT 155 (232)
T ss_dssp TCSEEEEECCSS--------CCSSCHHHHHHHHHHT----------TCEEEEECCS-------HHHHHHHHHTTCSEEEC
T ss_pred CCCEEEECcccc--------CCHHHHHHHHHHHHHC----------CCEEEEeCCC-------HHHHHHHHhCCCCEEEE
Confidence 399999987541 1234577788777642 5788887642 34567788999999865
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+|.. +... +.. ....++.++++++. ++|+|+.|||.|++|+.+++++||+.|+++++++
T Consensus 156 ~~~g--~t~~----------~~~-----~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~- 214 (232)
T 3igs_A 156 TMSG--YTTP----------DTP-----EEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT- 214 (232)
T ss_dssp TTTT--SSSS----------SCC-----SSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH-
T ss_pred cCcc--CCCC----------CCC-----CCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc-
Confidence 4432 1100 001 12256788888876 6999999999999999999999999999999996
Q ss_pred cCCChHHHHHHHHHHHH
Q 012517 429 GGPALIPQIKAELAECL 445 (462)
Q Consensus 429 ~GP~~i~~i~~~L~~~l 445 (462)
.| ..+.+.+.+.+
T Consensus 215 -~p---~~~~~~~~~~i 227 (232)
T 3igs_A 215 -RL---EHICGWYNDAL 227 (232)
T ss_dssp -CH---HHHHHHHHHHH
T ss_pred -CH---HHHHHHHHHHH
Confidence 34 34444444444
No 73
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.78 E-value=1.4e-07 Score=90.40 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=82.4
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|++.++...- .+++.+.++++.+++. ..++++.+.. .+.++.+++.|+|.|.+
T Consensus 101 Gad~I~l~~~~~--------~~p~~l~~~i~~~~~~----------g~~v~~~v~t-------~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 101 GADIIAFDASFR--------SRPVDIDSLLTRIRLH----------GLLAMADCST-------VNEGISCHQKGIEFIGT 155 (229)
T ss_dssp TCSEEEEECCSS--------CCSSCHHHHHHHHHHT----------TCEEEEECSS-------HHHHHHHHHTTCSEEEC
T ss_pred CCCEEEECcccc--------CChHHHHHHHHHHHHC----------CCEEEEecCC-------HHHHHHHHhCCCCEEEe
Confidence 499999987541 1224577888877642 5788887642 34567788999999865
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
+|.. +.. ++.. ....++.++++++. ++|+|+.|||.|++|+.+++++||+.|+++++++
T Consensus 156 ~~~g--~t~-----------~~~~----~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 156 TLSG--YTG-----------PITP----VEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp TTTT--SSS-----------SCCC----SSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred cCcc--CCC-----------CCcC----CCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 4332 110 0000 12256788888875 6999999999999999999999999999999996
No 74
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.75 E-value=6.1e-07 Score=87.36 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=100.3
Q ss_pred cCcEE--EEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC-------CChhhHHHHHHHHH
Q 012517 269 YADYL--VINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD-------LSKEDLEDIAAVAV 339 (462)
Q Consensus 269 ~aD~l--eiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd-------l~~~~~~~ia~~~~ 339 (462)
.+|.| .+|..|+.. +.+.+.++.+.+.+++. +.|+++.+.++ ++.+++.+.++.+.
T Consensus 112 Ga~~v~~~l~~~~~~~---------~~~~~~~~~v~~~~~~~------g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~ 176 (273)
T 2qjg_A 112 GADAVSIHVNVGSDED---------WEAYRDLGMIAETCEYW------GMPLIAMMYPRGKHIQNERDPELVAHAARLGA 176 (273)
T ss_dssp TCSEEEEEEEETSTTH---------HHHHHHHHHHHHHHHHH------TCCEEEEEEECSTTCSCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCH---------HHHHHHHHHHHHHHHHc------CCCEEEEeCCCCcccCCCCCHhHHHHHHHHHH
Confidence 49999 788877521 23334455555554432 68999987322 44556777789999
Q ss_pred HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC--HHHHHH----HH
Q 012517 340 ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS--GEDAYR----KI 413 (462)
Q Consensus 340 ~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s--~~dA~e----~i 413 (462)
+.|+|.|.++++ ..++.++++++.+ ++||++.|||.+ .+|+.+ .+
T Consensus 177 ~~Gad~i~~~~~---------------------------~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~ 227 (273)
T 2qjg_A 177 ELGADIVKTSYT---------------------------GDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAM 227 (273)
T ss_dssp HTTCSEEEECCC---------------------------SSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred HcCCCEEEECCC---------------------------CCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 999998876521 1256788888888 699999999994 888555 44
Q ss_pred HhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 414 RAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 414 ~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
++||+.|.++|+++. .++ +.+..+++.+.+.+. .+++|+.-
T Consensus 228 ~~Ga~gv~vg~~i~~-~~~-~~~~~~~l~~~~~~~--~~~~~~~~ 268 (273)
T 2qjg_A 228 EAGAAGVAVGRNIFQ-HDD-VVGITRAVCKIVHEN--ADVEEALK 268 (273)
T ss_dssp HHTCSEEECCHHHHT-SSS-HHHHHHHHHHHHHHC--CCHHHHHT
T ss_pred HcCCcEEEeeHHhhC-CCC-HHHHHHHHHHHHhcC--CCHHHHHH
Confidence 799999999999964 565 556666777777653 68888753
No 75
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.75 E-value=2.8e-07 Score=97.89 Aligned_cols=155 Identities=17% Similarity=0.068 Sum_probs=103.4
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCC-CCEEEEecCCCChhhHHHHHHHHHHcCCcEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGP-PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLI 347 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~-~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIi 347 (462)
.+|.+++....-+ ...+.+.++.+++.. .+ .|++++--.+ .+-++.+.++|+|+|+
T Consensus 254 gv~~l~Vd~~~g~---------~~~~~~~i~~lk~~~--------~~~~~Vi~G~V~t------~~~a~~l~~aGad~I~ 310 (503)
T 1me8_A 254 GADVLCIDSSDGF---------SEWQKITIGWIREKY--------GDKVKVGAGNIVD------GEGFRYLADAGADFIK 310 (503)
T ss_dssp TCSEEEECCSCCC---------SHHHHHHHHHHHHHH--------GGGSCEEEEEECS------HHHHHHHHHHTCSEEE
T ss_pred hccceEEecccCc---------ccchhhHHHHHHHhC--------CCCceEeeccccC------HHHHHHHHHhCCCeEE
Confidence 3899988765321 122445556666653 24 7898765432 3456778899999999
Q ss_pred EecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-------CCccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 348 ISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-------GKIPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 348 vsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-------~~ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
+++..-+.. ... ..-|+ |.| ....+.++.+.+. .++|||+.|||.++.|+.++|.+||++|
T Consensus 311 Vg~~~g~~~----~~r---~~~~~-g~p----~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V 378 (503)
T 1me8_A 311 IGIGGGSIC----ITR---EQKGI-GRG----QATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFI 378 (503)
T ss_dssp ECSSCSTTC----CST---TTTCC-CCC----HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred ecccCCcCc----ccc---cccCC-CCc----hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 955321100 000 00111 222 2344444444332 1599999999999999999999999999
Q ss_pred EEchhhhh-------------------cC----------------------------------C--ChHHHHHHHHHHHH
Q 012517 421 QLYTAFAY-------------------GG----------------------------------P--ALIPQIKAELAECL 445 (462)
Q Consensus 421 qv~Tali~-------------------~G----------------------------------P--~~i~~i~~~L~~~l 445 (462)
|++|.|+. .| + .++..+..+|+..|
T Consensus 379 ~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m 458 (503)
T 1me8_A 379 MLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTM 458 (503)
T ss_dssp EESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------CCCEEEEECCBCHHHHHHHHHHHHHHHH
T ss_pred EECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecccceeEecCCCCcHHHHHHHHHHHHHHHH
Confidence 99999961 11 0 45888899999999
Q ss_pred HHcCCCCHHHhhc
Q 012517 446 ERDGFKSIIEAVG 458 (462)
Q Consensus 446 ~~~G~~si~e~~G 458 (462)
...|.+|++|+..
T Consensus 459 ~~~G~~~i~~l~~ 471 (503)
T 1me8_A 459 CNCGALTIPQLQS 471 (503)
T ss_dssp HHTTCSBHHHHHH
T ss_pred HhcCcchHHHHHh
Confidence 9999999999975
No 76
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.74 E-value=2.5e-07 Score=87.21 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=82.5
Q ss_pred cCcEEEEeccCCCCCCcccccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLI 347 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIi 347 (462)
.+|++.++...-. ++ +.+.++++.+++.. .+.++++.+. + ..+ +..+.+.|+|.|.
T Consensus 88 Gad~v~l~~~~~~--------~p~~~~~~~i~~~~~~~--------~~~~v~~~~~---t---~~e-~~~~~~~G~d~i~ 144 (223)
T 1y0e_A 88 QCEVIALDATLQQ--------RPKETLDELVSYIRTHA--------PNVEIMADIA---T---VEE-AKNAARLGFDYIG 144 (223)
T ss_dssp TCSEEEEECSCSC--------CSSSCHHHHHHHHHHHC--------TTSEEEEECS---S---HHH-HHHHHHTTCSEEE
T ss_pred CCCEEEEeeeccc--------CcccCHHHHHHHHHHhC--------CCceEEecCC---C---HHH-HHHHHHcCCCEEE
Confidence 3999999865311 11 34567888887642 2567777553 2 222 4567899999987
Q ss_pred EecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 348 ISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 348 vsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
++|...... ..++. .....++.++++++.+ ++|||+.|||.|++|+.+++++||+.|+++|+++
T Consensus 145 ~~~~g~t~~----------~~~~~----~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 145 TTLHGYTSY----------TQGQL----LYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp CTTTTSSTT----------STTCC----TTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred eCCCcCcCC----------CCCCC----CCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 655432100 00000 0123567889999988 7999999999999999999999999999999974
No 77
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.74 E-value=5.2e-07 Score=88.35 Aligned_cols=168 Identities=19% Similarity=0.225 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHHcccCcEEEEe--ccCCCCCCc-------ccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe
Q 012517 252 SEDAAADYVQGVHTLSQYADYLVIN--VSSPNTPGL-------RMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~~~aD~leiN--vSsPnt~gl-------r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi 322 (462)
+.+.+.++++.+.+.+ +|+||+. +|-|...|- |.|++.-.+..+++.|++.+++ ..+.|+.+-.
T Consensus 30 ~~~~~~~~~~~l~~~G--aD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~-----~~~~Pivlm~ 102 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNG--ADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQ-----HPDMPIGLLL 102 (267)
T ss_dssp CHHHHHHHHHHHHHTT--CSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-----CTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-----CCCCCEEEEe
Confidence 3454445555554444 9999998 577766542 2233332333444444444322 1367887753
Q ss_pred cCCC-ChhhHHHHHHHHHHcCCcEEEEecCCccCC----------CC----C--CC-------------C--CcccccCC
Q 012517 323 APDL-SKEDLEDIAAVAVALRLDGLIISNTTISRP----------DP----V--SK-------------N--PVAKETGG 370 (462)
Q Consensus 323 spdl-~~~~~~~ia~~~~~~GvdgIivsNTt~~r~----------~~----~--~~-------------~--~~~~~~GG 370 (462)
-.+. -.-.++.+++.+.++|+||+++..-..... +. + +. . ......-|
T Consensus 103 Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~G 182 (267)
T 3vnd_A 103 YANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAG 182 (267)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCC
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCC
Confidence 1110 001235666666667777766643221110 00 0 00 0 00001122
Q ss_pred CCCCc--CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 371 LSGKP--LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 371 lSG~~--l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
..|.. +.+...+.++++++.+ ++||+.-|||.+++++.+.+.+|||.|-++|+++.
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp CC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 33322 2334568899999987 79999999999999999999999999999999963
No 78
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.73 E-value=2.1e-07 Score=112.48 Aligned_cols=148 Identities=14% Similarity=0.027 Sum_probs=99.4
Q ss_pred ceEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcE--EEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCC
Q 012517 240 GILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADY--LVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP 316 (462)
Q Consensus 240 ~~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~--leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 316 (462)
.++++|+..- +++....+...++.+.+ .++. +.+....|. ..++++.+++. ++
T Consensus 638 ~p~gvN~~~~--~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~------------~e~~~~~l~~~----------gi 693 (2060)
T 2uva_G 638 RGITVNLIYV--NPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS------------IEVANEYIQTL----------GI 693 (2060)
T ss_dssp CCEEEEEETT--CTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC------------HHHHHHHHHHS----------CC
T ss_pred CCeEeccccc--CcccchhHHHHHHHHHHcCCCcceEeecCCCCC------------HHHHHHHHHHc----------CC
Confidence 3799999752 33322223344444443 3666 777665542 12344444432 57
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCC-CcCccchHHHHHHHHHhcCCCc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSG-KPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG-~~l~~~al~~v~~i~~~~~~~i 395 (462)
+++..+ +.. .+....+..+.++|+|+|++.|-.- .+.||..| ..+....+.++.++++.+ ++
T Consensus 694 ~~i~~v-~~~--~~a~~~v~~l~~aG~D~iV~~q~~G------------~eaGGH~g~~d~~~~~l~lv~~i~~~~--~i 756 (2060)
T 2uva_G 694 RHISFK-PGS--VDAIQQVINIAKANPTFPIILQWTG------------GRGGGHHSFEDFHQPILLMYSRIRKCS--NI 756 (2060)
T ss_dssp SEEEEC-CCS--HHHHHHHHHHHHHCTTSCEEEEECC------------TTSSSSCCSCCSHHHHHHHHHHHHTST--TE
T ss_pred eEEEec-CCH--HHHHHHHHHHHHcCCCEEEEeeeEc------------ccCCCCCCcccccchHHHHHHHHHHHc--CC
Confidence 877444 433 3555666677899999999554321 13566655 233344678899999998 79
Q ss_pred cEEEecCCCCHHHHHHHH-----------HhCCCEEEEchhhhh
Q 012517 396 PLIGCGGISSGEDAYRKI-----------RAGATLVQLYTAFAY 428 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i-----------~aGAd~Vqv~Tali~ 428 (462)
|||+.|||.+++|+.++| .+|||.||++|.|+.
T Consensus 757 pviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~ 800 (2060)
T 2uva_G 757 VLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMT 800 (2060)
T ss_dssp EEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGG
T ss_pred CEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhc
Confidence 999999999999999999 999999999999986
No 79
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.72 E-value=1.8e-07 Score=89.55 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+++.|++.|++++.+.+ |..+|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~--------------~~~~g~-----~~~~~~~i~~~~--~ipvia~GGI~~~~d~ 205 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKD--------------GTLQGP-----NLELLKNVCAAT--DRPVVASGGVSSLDDL 205 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC---------------------CC-----CHHHHHHHHHTC--SSCEEEESCCCSHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeccCcc--------------cccCCC-----CHHHHHHHHHhc--CCCEEEECCCCCHHHH
Confidence 5677888999999999998876421 122232 478889999888 7999999999999999
Q ss_pred HHHHHh---CCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRA---GATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~a---GAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++ ||+.|+++|+++ .++..+.++++.+
T Consensus 206 ~~~~~~~~~Gadgv~vG~al~-~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 206 RAIAGLVPAGVEGAIVGKALY-AKAFTLEEALEAT 239 (244)
T ss_dssp HHHHTTGGGTEEEEEECHHHH-TTSSCHHHHHHHH
T ss_pred HHHHhhccCCCceeeeeHHHH-cCCCCHHHHHHHh
Confidence 999999 999999999996 4776666666543
No 80
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.68 E-value=6.4e-07 Score=94.58 Aligned_cols=155 Identities=19% Similarity=0.178 Sum_probs=102.8
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|.+++... .| +.+...+.++++++.. .+.|++.+--. + .+.+..+.+.|+|+|.+
T Consensus 245 G~d~ivi~~a----~g-----~~~~~~~~i~~l~~~~--------p~~pvi~G~v~--t----~~~a~~~~~~Gad~I~v 301 (491)
T 1zfj_A 245 GADAIVIDTA----HG-----HSAGVLRKIAEIRAHF--------PNRTLIAGNIA--T----AEGARALYDAGVDVVKV 301 (491)
T ss_dssp TCSEEEECCS----CT-----TCHHHHHHHHHHHHHC--------SSSCEEEEEEC--S----HHHHHHHHHTTCSEEEE
T ss_pred CCCeEEEeee----cC-----cchhHHHHHHHHHHHC--------CCCcEeCCCcc--C----HHHHHHHHHcCCCEEEE
Confidence 4999998863 12 1233456666666542 26888855322 2 35677888999999999
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC-CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR-GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~-~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
+|..-+.. . .....|+.++ ....+.++++..+ .++|||++|||.+++|+.+++.+||++|+++|+|+
T Consensus 302 g~g~g~~~----~---tr~~~~~~~p-----~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 302 GIGPGSIC----T---TRVVAGVGVP-----QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFA 369 (491)
T ss_dssp CSSCCTTB----C---HHHHTCCCCC-----HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred CccCCcce----E---EeeecCCCCC-----cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhh
Confidence 76321100 0 0011123222 3344455544221 16999999999999999999999999999999997
Q ss_pred -------------------hc------------------------------CC-----------ChHHHHHHHHHHHHHH
Q 012517 428 -------------------YG------------------------------GP-----------ALIPQIKAELAECLER 447 (462)
Q Consensus 428 -------------------~~------------------------------GP-----------~~i~~i~~~L~~~l~~ 447 (462)
|. |. .++..+..+|+..|..
T Consensus 370 ~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 449 (491)
T 1zfj_A 370 GTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGY 449 (491)
T ss_dssp TBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcCcceEecCcCCCHHHHHHHHHHHHHHHhhh
Confidence 21 10 1567778888999999
Q ss_pred cCCCCHHHhhc
Q 012517 448 DGFKSIIEAVG 458 (462)
Q Consensus 448 ~G~~si~e~~G 458 (462)
.|..++.|+..
T Consensus 450 ~G~~~~~~l~~ 460 (491)
T 1zfj_A 450 VGAGDIQELHE 460 (491)
T ss_dssp TTCSSHHHHHH
T ss_pred cCcccHHHHHh
Confidence 99999999874
No 81
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.68 E-value=1.1e-06 Score=85.95 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=100.9
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEec--cCCCCCCcc-------cccCc---hHHHHHHHHHHHHHHhhc
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINV--SSPNTPGLR-------MLQGR---KQLKDLVKKVQAARDEMQ 309 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNv--SsPnt~glr-------~lq~~---~~l~~ll~aV~~~~~~~~ 309 (462)
++..|..--.+.+.+.++++.+++.+ +|+||+++ |.|...|-- .+++. +...++++++++.
T Consensus 19 ~i~~i~~gdp~~~~~~~~~~~l~~~G--aD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~----- 91 (268)
T 1qop_A 19 FVPFVTLGDPGIEQSLKIIDTLIDAG--ADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREK----- 91 (268)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHTT--CSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-----
T ss_pred EEEEeeCCCCCHHHHHHHHHHHHHCC--CCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-----
Confidence 44455321123354445554444444 99999986 444433211 11111 2233556666543
Q ss_pred cCCCCCCCEEE--EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCC----------C----CCCCC--C--------
Q 012517 310 WGEEGPPPLLV--KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRP----------D----PVSKN--P-------- 363 (462)
Q Consensus 310 ~~~~~~~Pv~v--Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~----------~----~~~~~--~-------- 363 (462)
..+.||.+ +..|-. .-....+++.+.++|+|||++..-..... + .+-.+ +
T Consensus 92 ---~~~~Pv~lm~y~n~v~-~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~ 167 (268)
T 1qop_A 92 ---HPTIPIGLLMYANLVF-NNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVA 167 (268)
T ss_dssp ---CSSSCEEEEECHHHHH-TTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHH
T ss_pred ---CCCCCEEEEEcccHHH-HhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 13678866 222200 00235777888888888888764332110 0 00000 0
Q ss_pred -----c--ccccCCCCCC--cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 364 -----V--AKETGGLSGK--PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 364 -----~--~~~~GGlSG~--~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
. ....-|++|. +..+...+.++++++.+ ++||+.-|||.+++++.+++.+|||.|.++|+++.
T Consensus 168 ~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 168 SYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 0 0011255665 34455678999999988 79999999999999999999999999999999964
No 82
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.67 E-value=2e-06 Score=84.33 Aligned_cols=168 Identities=15% Similarity=0.178 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHHcccCcEEEEec--cCCCCCCc-------ccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe
Q 012517 252 SEDAAADYVQGVHTLSQYADYLVINV--SSPNTPGL-------RMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI 322 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~~~aD~leiNv--SsPnt~gl-------r~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi 322 (462)
+.+.+.++++.+.+. .+|.||+.+ |-|...|- |.|++.-.+..+++.|++.+++ ..+.|+++-.
T Consensus 32 ~~~~~~~~~~~l~~~--GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~-----~~~~Pivlm~ 104 (271)
T 3nav_A 32 NPEQSLAIMQTLIDA--GADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRAR-----NPETPIGLLM 104 (271)
T ss_dssp CHHHHHHHHHHHHHT--TCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-----CTTSCEEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-----CCCCCEEEEe
Confidence 445444444444443 399999984 55655442 2233433344555555554432 1367987743
Q ss_pred cCC-CChhhHHHHHHHHHHcCCcEEEEecCCccCC----------CC----C--C-CC------------C--cccccCC
Q 012517 323 APD-LSKEDLEDIAAVAVALRLDGLIISNTTISRP----------DP----V--S-KN------------P--VAKETGG 370 (462)
Q Consensus 323 spd-l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~----------~~----~--~-~~------------~--~~~~~GG 370 (462)
=.+ +-.--++.+++.+.++|+||+++..-..... +. + + .+ . .....-|
T Consensus 105 Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~G 184 (271)
T 3nav_A 105 YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAG 184 (271)
T ss_dssp CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC-
T ss_pred cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccC
Confidence 111 0001245666667777777766643221110 00 0 0 00 0 0001113
Q ss_pred CCCCc--CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 371 LSGKP--LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 371 lSG~~--l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
..|.. +.+...+.++++++.+ ++||+.-+||.+++++.+.+.+|||.|-++|+++.
T Consensus 185 vTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 185 VTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp -------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 33432 2233457899999988 69999999999999999999999999999999963
No 83
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.64 E-value=8.6e-08 Score=92.90 Aligned_cols=95 Identities=21% Similarity=0.291 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
...++++.+.+.|++.|.+++.. + .|..+|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 157 ~~~e~~~~~~~~G~~~i~~t~~~--~------------~g~~~g~-----~~~~i~~l~~~~--~ipvia~GGI~~~ed~ 215 (266)
T 2w6r_A 157 LLRDWVVEVEKRGAGEILLTSID--R------------DGTKSGY-----DTEMIRFVRPLT--TLPIIASGGAGKMEHF 215 (266)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETT--T------------TTTCSCC-----CHHHHHHHGGGC--CSCEEEESCCCSHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEEeec--C------------CCCcCCC-----CHHHHHHHHHHc--CCCEEEeCCCCCHHHH
Confidence 46788889999999999987654 2 1223332 478889999988 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.+++++||+.|+++|+++ ++|..+.++ .++|.+.||
T Consensus 216 ~~~~~~Gadgv~vgsal~-~~~~~~~~~----~~~l~~~g~ 251 (266)
T 2w6r_A 216 LEAFLAGADAALAASVFH-FREIDMREL----KEYLKKHGV 251 (266)
T ss_dssp HHHHHHTCSEEEESTTTC-----------------------
T ss_pred HHHHHcCCHHHHccHHHH-cCCCCHHHH----HHHHHHCCC
Confidence 999999999999999995 467665554 456666776
No 84
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.64 E-value=3.4e-07 Score=85.34 Aligned_cols=170 Identities=12% Similarity=0.125 Sum_probs=96.2
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++.+++.. .+.+ ++.+.++.+.++ +|.+++++.+|+. .+.++.+++... ..+.
T Consensus 11 ~~i~~~~~--~~~~---~~~~~~~~~~~~G~~~iev~~~~~~~------------~~~i~~ir~~~~---------~~~~ 64 (205)
T 1wa3_A 11 KIVAVLRA--NSVE---EAKEKALAVFEGGVHLIEITFTVPDA------------DTVIKELSFLKE---------KGAI 64 (205)
T ss_dssp CEEEEECC--SSHH---HHHHHHHHHHHTTCCEEEEETTSTTH------------HHHHHHTHHHHH---------TTCE
T ss_pred CEEEEEec--CCHH---HHHHHHHHHHHCCCCEEEEeCCChhH------------HHHHHHHHHHCC---------CCcE
Confidence 45566643 2556 444445555443 9999999987642 345666665431 1234
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccC-------CC--CCC---CCC--cccccCCCCCCcCcc---chHH
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISR-------PD--PVS---KNP--VAKETGGLSGKPLLS---LSNN 382 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r-------~~--~~~---~~~--~~~~~GGlSG~~l~~---~al~ 382 (462)
+.+..-.+.+ -++.+.+.|+|+| ++...... .+ .+. .+. ......|.+.-.+++ ...+
T Consensus 65 ig~~~v~~~~----~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~ 139 (205)
T 1wa3_A 65 IGAGTVTSVE----QCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQ 139 (205)
T ss_dssp EEEESCCSHH----HHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHH
T ss_pred EEecccCCHH----HHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHH
Confidence 4443222322 2566778999999 55433200 00 000 000 000011111111122 2456
Q ss_pred HHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCCh--HHHHHHHHHHHH
Q 012517 383 ILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPAL--IPQIKAELAECL 445 (462)
Q Consensus 383 ~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~--i~~i~~~L~~~l 445 (462)
.++++++.++ ++||++.|||+ .+++.+++++||+.|.++|+++. ++| +.+..+++.+.+
T Consensus 140 ~~~~l~~~~~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~--~d~~~~~~~~~~~~~~~ 200 (205)
T 1wa3_A 140 FVKAMKGPFP-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK--GTPDEVREKAKAFVEKI 200 (205)
T ss_dssp HHHHHHTTCT-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC--CCHHHHHHHHHHHHHHH
Confidence 7778888775 79999999996 89999999999999999999965 553 334444444433
No 85
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.62 E-value=3.9e-09 Score=101.69 Aligned_cols=90 Identities=26% Similarity=0.355 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+.+.|++.|+++++. + .|.++|. .++.++++++.+ ++|||++|||.|++|+
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~--~------------~g~~~g~-----~~~~~~~i~~~~--~iPvia~GGI~~~~d~ 215 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSID--R------------DGTKSGY-----DTEMIRFVRPLT--TLPIIASGGAGKMEHF 215 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEeccc--C------------CCCcCCC-----CHHHHHHHHHhC--CCCEEEECCCCCHHHH
Confidence 56678899999999999987653 1 1223332 356778888887 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++||+.|+++|+++ .+|++++++++.+
T Consensus 216 ~~~~~~Gad~v~vg~al~-~~p~~~~~~~~~~ 246 (247)
T 3tdn_A 216 LEAFLRGADKVSINTAAV-ENPSLITQIAQTF 246 (247)
T ss_dssp --------------------------------
T ss_pred HHHHHcCCcHhhccHHHH-cCcHHHHHHHHhc
Confidence 999999999999999995 6899999988754
No 86
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.62 E-value=6.5e-08 Score=94.39 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=94.7
Q ss_pred ccCcEEEEeccCCCCCCcccccC-----chHHHHHHHHHHHHHHhhccCCCCCCCEE----------EEecCCCCh---h
Q 012517 268 QYADYLVINVSSPNTPGLRMLQG-----RKQLKDLVKKVQAARDEMQWGEEGPPPLL----------VKIAPDLSK---E 329 (462)
Q Consensus 268 ~~aD~leiNvSsPnt~glr~lq~-----~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~----------vKispdl~~---~ 329 (462)
..||.+.+|-. .+++ ++.+.++++.+.+. + .-+++- ||+. .+.+ .
T Consensus 95 ~Ga~~Viigs~--------a~~~~g~~~p~~~~~~~~~~g~~--~------ivv~iD~k~~~~~g~~V~~~-gw~~~t~~ 157 (260)
T 2agk_A 95 KWASKVIVTSW--------LFTKEGHFQLKRLERLTELCGKD--R------IVVDLSCRKTQDGRWIVAMN-KWQTLTDL 157 (260)
T ss_dssp TTCSCEEECGG--------GBCTTCCBCHHHHHHHHHHHCGG--G------EEEEEEEEEEETTEEEEEET-TTTEEEEE
T ss_pred cCCCEEEECcH--------HHhhcCCCCHHHHHHHHHHhCcC--c------EEEEEEeeecCCCceEEEEc-CCccccCc
Confidence 44898887743 2344 67777877776421 1 112333 3332 1221 1
Q ss_pred hHH-HHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC--CccEEEecCCCCH
Q 012517 330 DLE-DIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG--KIPLIGCGGISSG 406 (462)
Q Consensus 330 ~~~-~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~--~ipIIg~GGI~s~ 406 (462)
++. ++++.+++. ++.|+++.-+ + .|.++|+ .+++++++++.+++ ++|||++|||.|.
T Consensus 158 ~~~~e~a~~~~~~-a~~il~t~i~--~------------dG~~~G~-----d~eli~~l~~~~~~~~~iPVIasGGi~s~ 217 (260)
T 2agk_A 158 ELNADTFRELRKY-TNEFLIHAAD--V------------EGLCGGI-----DELLVSKLFEWTKDYDDLKIVYAGGAKSV 217 (260)
T ss_dssp EESHHHHHHHTTT-CSEEEEEC---------------------CCC-----CHHHHHHHHHHHTTCSSCEEEEESCCCCT
T ss_pred cHHHHHHHHHHHh-cCEEEEEeec--c------------ccCcCCC-----CHHHHHHHHHhhcccCCceEEEeCCCCCH
Confidence 445 899999999 9999997543 2 2344554 57889999998732 5999999999999
Q ss_pred HHHHHHHHh--CCCEEEEchhh-hhcCC-ChHHHHHHHH
Q 012517 407 EDAYRKIRA--GATLVQLYTAF-AYGGP-ALIPQIKAEL 441 (462)
Q Consensus 407 ~dA~e~i~a--GAd~Vqv~Tal-i~~GP-~~i~~i~~~L 441 (462)
+|+.++++. ||+.|++++++ +|.|+ ..+.++++.+
T Consensus 218 ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 218 DDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWN 256 (260)
T ss_dssp HHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHH
Confidence 999999987 99999999998 77888 8888877644
No 87
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.56 E-value=2.8e-07 Score=91.56 Aligned_cols=79 Identities=15% Similarity=0.227 Sum_probs=63.2
Q ss_pred chHHHHHHHHHhcCCCccEE--EecCCCCHHHHHHHHHhCCCEEEEchhhhhc-CC-ChHHHHHHHHHHHHHHcCCCCHH
Q 012517 379 LSNNILKEMYLLTRGKIPLI--GCGGISSGEDAYRKIRAGATLVQLYTAFAYG-GP-ALIPQIKAELAECLERDGFKSII 454 (462)
Q Consensus 379 ~al~~v~~i~~~~~~~ipII--g~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~-GP-~~i~~i~~~L~~~l~~~G~~si~ 454 (462)
..++.++++++.+ ++|++ +.|||.+++|+.+++++||+.|.++|+++.. +| ..++++++.+.+++..+.+.+++
T Consensus 194 ~~~~ll~~i~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~~~~~~~~~i~ 271 (297)
T 4adt_A 194 APIDLILLTRKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSNFNNPKILLNVS 271 (297)
T ss_dssp CCHHHHHHHHHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTTCHHHHHHTT
T ss_pred CCHHHHHHHHHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 3567888998887 57776 9999999999999999999999999999753 23 35667777777777777777777
Q ss_pred Hhhcc
Q 012517 455 EAVGA 459 (462)
Q Consensus 455 e~~G~ 459 (462)
+-.|.
T Consensus 272 ~~~~~ 276 (297)
T 4adt_A 272 LGLGK 276 (297)
T ss_dssp TTCCC
T ss_pred hhccc
Confidence 76664
No 88
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.55 E-value=4.6e-07 Score=86.99 Aligned_cols=95 Identities=21% Similarity=0.293 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+++.|++.|+++.+. + .|..+|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~--~------------~g~~~g~-----~~~~~~~l~~~~--~ipvia~GGI~~~~d~ 210 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSID--R------------DGTKSGY-----DTEMIRFVRPLT--TLPIIASGGAGKMEHF 210 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETT--T------------TTSCSCC-----CHHHHHHHGGGC--CSCEEEESCCCSHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEecc--C------------CCCCCCC-----CHHHHHHHHHhc--CCCEEEECCCCCHHHH
Confidence 46788899999999999987543 1 1233332 467888998887 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.+++++||+.|+++|+++ ++|.-+.++++ +|++.|+
T Consensus 211 ~~~~~~Gadgv~vGsal~-~~~~~~~~~~~----~l~~~g~ 246 (253)
T 1thf_D 211 LEAFLAGADAALAASVFH-FREIDVRELKE----YLKKHGV 246 (253)
T ss_dssp HHHHHTTCSEEEESHHHH-TTCSCHHHHHH----HHHHTTC
T ss_pred HHHHHcCChHHHHHHHHH-cCCCCHHHHHH----HHHHcCC
Confidence 999999999999999996 46755555544 4556675
No 89
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.55 E-value=5e-07 Score=86.70 Aligned_cols=95 Identities=22% Similarity=0.314 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.+.|+++|+++++. +. |-.+|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~--~~------------g~~~g~-----~~~~i~~l~~~~--~ipvia~GGI~~~~d~ 211 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMD--RD------------GTKEGY-----DLRLTRMVAEAV--GVPVIASGGAGRMEHF 211 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETT--TT------------TTCSCC-----CHHHHHHHHHHC--SSCEEEESCCCSHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEeccc--CC------------CCcCCC-----CHHHHHHHHHHc--CCCEEEeCCCCCHHHH
Confidence 46788888999999999988543 21 222232 478899999988 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.+++++||+.|+++|+++ +++.-+.++++. |.+.|+
T Consensus 212 ~~~~~~Gadgv~vgsal~-~~~~~~~~~~~~----l~~~~~ 247 (252)
T 1ka9_F 212 LEAFQAGAEAALAASVFH-FGEIPIPKLKRY----LAEKGV 247 (252)
T ss_dssp HHHHHTTCSEEEESHHHH-TTSSCHHHHHHH----HHHTTC
T ss_pred HHHHHCCCHHHHHHHHHH-cCCCCHHHHHHH----HHHCCC
Confidence 999999999999999996 467667766554 555664
No 90
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.54 E-value=6e-06 Score=80.43 Aligned_cols=47 Identities=23% Similarity=0.111 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc
Q 012517 380 SNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG 429 (462)
Q Consensus 380 al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~ 429 (462)
..+.++++++.+ ++||+.-+||.+++++.+ +.+|||.|.++|+++..
T Consensus 194 ~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 194 IKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp HHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred HHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 347899999988 799999999999999999 89999999999999753
No 91
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.53 E-value=1e-06 Score=83.89 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=79.4
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEE--
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGL-- 346 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgI-- 346 (462)
.+|++.++...-..+ +.+.+.++++.+++.. .+.++++.+.. . +-+..+.+.|+|.|
T Consensus 101 Gad~V~l~~~~~~~~------~~~~~~~~i~~i~~~~--------~~~~v~~~~~t---~----~ea~~a~~~Gad~i~~ 159 (234)
T 1yxy_A 101 NIAVIAMDCTKRDRH------DGLDIASFIRQVKEKY--------PNQLLMADIST---F----DEGLVAHQAGIDFVGT 159 (234)
T ss_dssp TCSEEEEECCSSCCT------TCCCHHHHHHHHHHHC--------TTCEEEEECSS---H----HHHHHHHHTTCSEEEC
T ss_pred CCCEEEEcccccCCC------CCccHHHHHHHHHHhC--------CCCeEEEeCCC---H----HHHHHHHHcCCCEEee
Confidence 399999876541111 0124567888887652 25678876642 1 22677889999998
Q ss_pred EEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 347 IISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 347 ivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
.+...+. . ..+..| ..++.++++++. ++||++.|||.|++|+.+++++|||.|+++|++
T Consensus 160 ~v~g~~~---~----------~~~~~~-----~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal 218 (234)
T 1yxy_A 160 TLSGYTP---Y----------SRQEAG-----PDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAI 218 (234)
T ss_dssp TTTTSST---T----------SCCSSS-----CCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHH
T ss_pred eccccCC---C----------CcCCCC-----CCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHH
Confidence 3322110 0 001122 246778888775 599999999999999999999999999999998
Q ss_pred h
Q 012517 427 A 427 (462)
Q Consensus 427 i 427 (462)
+
T Consensus 219 ~ 219 (234)
T 1yxy_A 219 T 219 (234)
T ss_dssp H
T ss_pred h
Confidence 5
No 92
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.52 E-value=1.8e-05 Score=76.61 Aligned_cols=204 Identities=16% Similarity=0.112 Sum_probs=121.9
Q ss_pred EEEcCeeeCCcEEeCCC-CCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHH
Q 012517 128 LEVWGRKFSNPLGLAAG-FDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAK 206 (462)
Q Consensus 128 v~v~Gl~f~NPiglAAG-~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~ 206 (462)
..+.|.+|.+++.+..| |.....+.+.+...|.-.|+|-+=.. ..++ .+-+.+.+
T Consensus 4 l~i~~~~~~srl~~Gtgky~~~~~~~~ai~asg~eivtva~rR~--~~~~----------------------~~~~~~~~ 59 (268)
T 2htm_A 4 WKVGPVELKSRLILGSGKYEDFGVMREAIAAAKAEVVTVSVRRV--ELKA----------------------PGHVGLLE 59 (268)
T ss_dssp EEETTEEECCSEEEECSSCSCHHHHHHHHHHTTCSEEEEEEEEC--C-----------------------------CHHH
T ss_pred eEECCEEeecceEEecCCCCCHHHHHHHHHHhCCCEEEEEcccc--CCCC----------------------CCcccHHH
Confidence 67999999999999987 55566677778899999998862111 0000 11122333
Q ss_pred HHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcc--cCcEEEEeccCCCCCC
Q 012517 207 RLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQ--YADYLVINVSSPNTPG 284 (462)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~--~aD~leiNvSsPnt~g 284 (462)
.|. ++ .+-.|-.. ..|.+ |.+..++...+ .-+.+-+-+.+-+
T Consensus 60 ~i~----~~-------------------------~~lpntaG-~~tae---eAv~~a~lare~~gt~~iKlEvi~d~--- 103 (268)
T 2htm_A 60 ALE----GV-------------------------RLLPNTAG-ARTAE---EAVRLARLGRLLTGERWVKLEVIPDP--- 103 (268)
T ss_dssp HTT----TS-------------------------EEEEBCTT-CCSHH---HHHHHHHHHHHHHCCSEEBCCCCSCT---
T ss_pred HHh----hh-------------------------hccCcccC-CCCHH---HHHHHHHhhhHhcCcceeeeeeccCc---
Confidence 332 10 23333332 23555 44444443332 2567666554321
Q ss_pred cccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc
Q 012517 285 LRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV 364 (462)
Q Consensus 285 lr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~ 364 (462)
+.+. ..+.+.+++.++..+ ..+-++..+.+| ..+++.+.+.|++.|.--..
T Consensus 104 -~~l~--pD~~~tv~aa~~L~k-------~Gf~Vlpy~~~D------~~~ak~l~~~G~~aVmPlg~------------- 154 (268)
T 2htm_A 104 -TYLL--PDPLETLKAAERLIE-------EDFLVLPYMGPD------LVLAKRLAALGTATVMPLAA------------- 154 (268)
T ss_dssp -TTTC--CCHHHHHHHHHHHHH-------TTCEECCEECSC------HHHHHHHHHHTCSCBEEBSS-------------
T ss_pred -cccC--cCHHHHHHHHHHHHH-------CCCEEeeccCCC------HHHHHHHHhcCCCEEEecCc-------------
Confidence 1111 123455555554432 234444445554 27889999999998842111
Q ss_pred ccccCCCCCCcCccchHHHHHHHHH-hcCCC-ccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 365 AKETGGLSGKPLLSLSNNILKEMYL-LTRGK-IPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 365 ~~~~GGlSG~~l~~~al~~v~~i~~-~~~~~-ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
..|+ |..+. ..+.++.+++ .. + +|||.-|||.+++||.++++.|||.|+++|++..
T Consensus 155 --pIGs--G~Gi~--~~~~L~~i~~~~~--~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 155 --PIGS--GWGVR--TRALLELFAREKA--SLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp --STTT--CCCST--THHHHHHHHHTTT--TSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred --cCcC--CcccC--CHHHHHHHHHhcC--CCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 1121 33232 3466888888 44 6 9999999999999999999999999999999964
No 93
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.51 E-value=3.8e-07 Score=87.70 Aligned_cols=102 Identities=22% Similarity=0.262 Sum_probs=79.8
Q ss_pred EEEEecCCCC--hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 318 LLVKIAPDLS--KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 318 v~vKispdl~--~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
..||+.-... ..+..++++.+++.|+|.|+++.-... +... ...++.++++++.+ ++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~--------------~~~~-----~~~~~~i~~i~~~~--~i 80 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD--------------GTKS-----GYDTEMIRFVRPLT--TL 80 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTT--------------TCSS-----CCCHHHHHHHGGGC--CS
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcc--------------cCCC-----cccHHHHHHHHHhC--CC
Confidence 4566653222 236789999999999999998753211 1111 12568899999998 79
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
|||+.|||.+++|+.+++++|||.|.++|+++. +|.++.++.+.+
T Consensus 81 pvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~-dp~~~~~~~~~~ 125 (247)
T 3tdn_A 81 PIIASGGAGKMEHFLEAFLRGADKVSINTAAVE-NPSLITQIAQTF 125 (247)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH-CTHHHHHHHHHH
T ss_pred CEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh-ChHHHHHHHHHh
Confidence 999999999999999999999999999999975 799998887765
No 94
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.50 E-value=1.2e-05 Score=84.94 Aligned_cols=145 Identities=21% Similarity=0.203 Sum_probs=88.8
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.+++.|+- +++ ..+.++.|. ..+|+|+|..+-=+ .+.+.+.++.|++.. .++||+
T Consensus 271 ~VgAAVgv---~~d----~~eR~~aLv~AGvD~iviD~ahGh---------s~~v~~~i~~ik~~~--------p~~~vi 326 (556)
T 4af0_A 271 YCGAAIGT---RPG----DKDRLKLLAEAGLDVVVLDSSQGN---------SVYQIEFIKWIKQTY--------PKIDVI 326 (556)
T ss_dssp CCEEEECS---SHH----HHHHHHHHHHTTCCEEEECCSCCC---------SHHHHHHHHHHHHHC--------TTSEEE
T ss_pred eeEEEecc---Ccc----HHHHHHHHHhcCCcEEEEeccccc---------cHHHHHHHHHHHhhC--------CcceEE
Confidence 47787764 333 233334333 34999999865321 144567777777642 356775
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
+==- .+ .+-++.+.++|+|+|.+.=..-+. .. ....-|. |.|-. .+..-+++.++.. .+|||+
T Consensus 327 aGNV--aT----~e~a~~Li~aGAD~vkVGiGpGSi---Ct----Tr~v~Gv-G~PQ~-tAi~~~a~~a~~~--~vpvIA 389 (556)
T 4af0_A 327 AGNV--VT----REQAAQLIAAGADGLRIGMGSGSI---CI----TQEVMAV-GRPQG-TAVYAVAEFASRF--GIPCIA 389 (556)
T ss_dssp EEEE--CS----HHHHHHHHHHTCSEEEECSSCSTT---BC----CTTTCCS-CCCHH-HHHHHHHHHHGGG--TCCEEE
T ss_pred eccc--cC----HHHHHHHHHcCCCEEeecCCCCcc---cc----cccccCC-CCcHH-HHHHHHHHHHHHc--CCCEEe
Confidence 5322 12 456777888999999875221100 00 0011122 22211 1333344555555 699999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 400 CGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
-|||.+.-|+.++|.+|||.||+++-|
T Consensus 390 DGGI~~sGDi~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 390 DGGIGNIGHIAKALALGASAVMMGGLL 416 (556)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTT
T ss_pred cCCcCcchHHHHHhhcCCCEEEEchhh
Confidence 999999999999999999999999876
No 95
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.48 E-value=1.2e-05 Score=76.80 Aligned_cols=214 Identities=15% Similarity=0.221 Sum_probs=137.2
Q ss_pred CcEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhh-ccC
Q 012517 137 NPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQH-GKR 215 (462)
Q Consensus 137 NPiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~-~~~ 215 (462)
.|-.||+=|..-++.++.+.+.|.-++-+.-. .|.--|. +. .|. .+.+.+++.. .+
T Consensus 8 ~psil~~D~~~l~~~i~~l~~~g~d~~h~DVm-----Dg~Fvpn-------------~~---~G~-~~v~~ir~~~~~~- 64 (228)
T 3ovp_A 8 GPSILNSDLANLGAECLRMLDSGADYLHLDVM-----DGHFVPN-------------IT---FGH-PVVESLRKQLGQD- 64 (228)
T ss_dssp EEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEE-----BSSSSSC-------------BC---BCH-HHHHHHHHHHCSS-
T ss_pred eeeheeCCchhHHHHHHHHHHcCCCEEEEEec-----CCCcCcc-------------cc---cCH-HHHHHHHHhhCCC-
Confidence 35556666767788999999999876655221 1111111 11 233 2455566542 21
Q ss_pred cccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHH
Q 012517 216 KLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLK 295 (462)
Q Consensus 216 ~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~ 295 (462)
.++.+.+.-+ +++ +|++.+..++ +|++.++.-++ +.+.
T Consensus 65 ------------------------~~~dvhLmv~--~p~---~~i~~~~~aG--ad~itvH~Ea~-----------~~~~ 102 (228)
T 3ovp_A 65 ------------------------PFFDMHMMVS--KPE---QWVKPMAVAG--ANQYTFHLEAT-----------ENPG 102 (228)
T ss_dssp ------------------------SCEEEEEECS--CGG---GGHHHHHHHT--CSEEEEEGGGC-----------SCHH
T ss_pred ------------------------CcEEEEEEeC--CHH---HHHHHHHHcC--CCEEEEccCCc-----------hhHH
Confidence 1466666543 455 6776666666 99999986432 1245
Q ss_pred HHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCc
Q 012517 296 DLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKP 375 (462)
Q Consensus 296 ~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~ 375 (462)
+.++.+++. ...+.|=+.|..+.+.+.++.+ .+|.|.+- +. .. |+.|..
T Consensus 103 ~~i~~i~~~----------G~k~gval~p~t~~e~l~~~l~-----~~D~Vl~m-sv--------------~p-Gf~Gq~ 151 (228)
T 3ovp_A 103 ALIKDIREN----------GMKVGLAIKPGTSVEYLAPWAN-----QIDMALVM-TV--------------EP-GFGGQK 151 (228)
T ss_dssp HHHHHHHHT----------TCEEEEEECTTSCGGGTGGGGG-----GCSEEEEE-SS--------------CT-TTCSCC
T ss_pred HHHHHHHHc----------CCCEEEEEcCCCCHHHHHHHhc-----cCCeEEEe-ee--------------cC-CCCCcc
Confidence 667777643 4567777888877655554442 37876542 11 11 345555
Q ss_pred CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC---hHHHHHHHHHHHHHHcC
Q 012517 376 LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA---LIPQIKAELAECLERDG 449 (462)
Q Consensus 376 l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~---~i~~i~~~L~~~l~~~G 449 (462)
..+..++.++++++..+ +++|...|||+ ++.+.+++++|||.+-++|++. +.++ .++++++.+.+++.+.+
T Consensus 152 f~~~~l~ki~~lr~~~~-~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf-~a~dp~~~~~~l~~~~~~~~~~~~ 225 (228)
T 3ovp_A 152 FMEDMMPKVHWLRTQFP-SLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIM-RSEDPRSVINLLRNVCSEAAQKRS 225 (228)
T ss_dssp CCGGGHHHHHHHHHHCT-TCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHH-TCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHhcC-CCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHh-CCCCHHHHHHHHHHHHHHHHhhcc
Confidence 56778888999999865 69999999995 8999999999999999999985 3444 45666777777766544
No 96
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.46 E-value=2.6e-06 Score=83.54 Aligned_cols=174 Identities=21% Similarity=0.249 Sum_probs=95.9
Q ss_pred HHHHHHHHHcccCcEEEEec--cCCCCCCc-------ccccCc---hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC
Q 012517 258 DYVQGVHTLSQYADYLVINV--SSPNTPGL-------RMLQGR---KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD 325 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNv--SsPnt~gl-------r~lq~~---~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd 325 (462)
...+.++.+.+.+|.|||.+ |-|-..|- |.+++. +.+.++++++++. .+.|+++ +. +
T Consensus 31 ~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~---------~~~Pii~-m~-y 99 (271)
T 1ujp_A 31 GFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL---------TEKPLFL-MT-Y 99 (271)
T ss_dssp HHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH---------CCSCEEE-EC-C
T ss_pred HHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---------CCCCEEE-Ee-c
Confidence 44445555555599999975 33432221 112221 2233555555443 3689888 31 1
Q ss_pred CC---hhhHHHHHHHHHHcCCcEEEEecCCccCCC---------CC-------CCCC---------------cccccCCC
Q 012517 326 LS---KEDLEDIAAVAVALRLDGLIISNTTISRPD---------PV-------SKNP---------------VAKETGGL 371 (462)
Q Consensus 326 l~---~~~~~~ia~~~~~~GvdgIivsNTt~~r~~---------~~-------~~~~---------------~~~~~GGl 371 (462)
.. .-....+++.+.++|+||+++-.-+..... .+ +..+ .....-|+
T Consensus 100 ~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~ 179 (271)
T 1ujp_A 100 LNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGV 179 (271)
T ss_dssp HHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC---
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcc
Confidence 11 012356777777788888776543221100 00 0000 00112234
Q ss_pred CCCc--CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcC--CChHHHHHHHHHHHHH
Q 012517 372 SGKP--LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGG--PALIPQIKAELAECLE 446 (462)
Q Consensus 372 SG~~--l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~G--P~~i~~i~~~L~~~l~ 446 (462)
.|.. ..+...++++++++.+ ++||+.-|||+|++++.++ +|||.|.++|+++... -..++++.+++++.+.
T Consensus 180 TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~~~~fv~~l~~~~~ 254 (271)
T 1ujp_A 180 TGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEEGRSLAPLLQEIRQGLQ 254 (271)
T ss_dssp ---------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHTTCCHHHHHHHHHHHHB
T ss_pred cCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccchHHHHHHHHHHHHHHHH
Confidence 4442 1222357899999987 7999999999999999996 9999999999997531 1256677777766553
No 97
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.45 E-value=7.2e-07 Score=95.91 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+++.|++.|+++..+ + .|.++|. .+++++++++.+ ++|||++|||.|.+|+
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~--~------------dG~~~G~-----d~~li~~l~~~~--~iPVIasGGi~s~~d~ 511 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCID--K------------DGSNSGY-----DLELIEHVKDAV--KIPVIASSGAGVPEHF 511 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGG--G------------TTTCSCC-----CHHHHHHHHHHC--SSCEEECSCCCSHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCC--C------------CCCCCCC-----CHHHHHHHHHhC--CccEEEECCCCCHHHH
Confidence 46789999999999999876432 2 2334553 478899999998 7999999999999999
Q ss_pred HHHHH-hCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 410 YRKIR-AGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 410 ~e~i~-aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.++++ .||+.|+++|++ +.++..+.++++ +|.+.|+
T Consensus 512 ~~~~~~~G~~gvivg~a~-~~~~~~~~e~~~----~l~~~gi 548 (555)
T 1jvn_A 512 EEAFLKTRADACLGAGMF-HRGEFTVNDVKE----YLLEHGL 548 (555)
T ss_dssp HHHHHHSCCSEEEESHHH-HTTSCCHHHHHH----HHHHTTC
T ss_pred HHHHHhcCChHHHHHHHH-HcCCCCHHHHHH----HHHHCCC
Confidence 99998 899999999999 457888887765 4566665
No 98
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.42 E-value=5.1e-05 Score=72.01 Aligned_cols=207 Identities=14% Similarity=0.238 Sum_probs=128.0
Q ss_pred eCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCccccc
Q 012517 141 LAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDET 220 (462)
Q Consensus 141 lAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~ 220 (462)
+|+=+....+.++.+.+.|.-++.+.-. .|+-.|.+ . .|. .+++.+++...
T Consensus 14 ~a~d~~~l~~~i~~~~~~Gad~i~l~i~-----Dg~fv~~~-----------~-----~~~-~~~~~lr~~~~------- 64 (228)
T 1h1y_A 14 LSSDFANLAAEADRMVRLGADWLHMDIM-----DGHFVPNL-----------T-----IGA-PVIQSLRKHTK------- 64 (228)
T ss_dssp GGSCGGGHHHHHHHHHHTTCSEEEEEEE-----BSSSSSCB-----------C-----BCH-HHHHHHHTTCC-------
T ss_pred eeCCHHHHHHHHHHHHHcCCCEEEEEEe-----cCCcCcch-----------h-----hCH-HHHHHHHhhcC-------
Confidence 3333567778899999999888766532 12211211 1 233 34455553211
Q ss_pred ccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHH
Q 012517 221 SRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKK 300 (462)
Q Consensus 221 ~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~a 300 (462)
.++.|-+.-| +++ +|++.+..++ +|++.++...+. +.+.++++.
T Consensus 65 -------------------~~~~v~lmv~--d~~---~~i~~~~~ag--ad~v~vH~~~~~----------~~~~~~~~~ 108 (228)
T 1h1y_A 65 -------------------AYLDCHLMVT--NPS---DYVEPLAKAG--ASGFTFHIEVSR----------DNWQELIQS 108 (228)
T ss_dssp -------------------SEEEEEEESS--CGG---GGHHHHHHHT--CSEEEEEGGGCT----------TTHHHHHHH
T ss_pred -------------------CcEEEEEEec--CHH---HHHHHHHHcC--CCEEEECCCCcc----------cHHHHHHHH
Confidence 1455555444 343 5666666665 999999874321 222455666
Q ss_pred HHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHc--CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCcc
Q 012517 301 VQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVAL--RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLS 378 (462)
Q Consensus 301 V~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~--GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~ 378 (462)
+++ ....+++-+.|..+.+.+ +...+. ++|.|.+.... +|.+|....+
T Consensus 109 i~~----------~g~~igv~~~p~t~~e~~----~~~~~~~~~~d~vl~~sv~----------------pg~~g~~~~~ 158 (228)
T 1h1y_A 109 IKA----------KGMRPGVSLRPGTPVEEV----FPLVEAENPVELVLVMTVE----------------PGFGGQKFMP 158 (228)
T ss_dssp HHH----------TTCEEEEEECTTSCGGGG----HHHHHSSSCCSEEEEESSC----------------TTCSSCCCCG
T ss_pred HHH----------cCCCEEEEEeCCCCHHHH----HHHHhcCCCCCEEEEEeec----------------CCCCcccCCH
Confidence 653 257888888877554433 333444 89988764211 1233444445
Q ss_pred chHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHH
Q 012517 379 LSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446 (462)
Q Consensus 379 ~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~ 446 (462)
..++.++++++..+ ++||+..|||+. +++.+.+++|||.+-++|+++. .++ +.+..+.+++.++
T Consensus 159 ~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~-~~d-~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 159 EMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFG-AAE-PGEVISALRKSVE 222 (228)
T ss_dssp GGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHT-SSC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC-CCC-HHHHHHHHHHHHH
Confidence 67888999999875 799999999997 8999999999999999999964 466 3334444444443
No 99
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.42 E-value=2.9e-06 Score=83.51 Aligned_cols=126 Identities=16% Similarity=0.155 Sum_probs=82.7
Q ss_pred HcccCcEEE--EeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEec---CCCChhhHHHHHHHHHH
Q 012517 266 LSQYADYLV--INVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA---PDLSKEDLEDIAAVAVA 340 (462)
Q Consensus 266 l~~~aD~le--iNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis---pdl~~~~~~~ia~~~~~ 340 (462)
+...||-|. +|++. ..-.+.+.+.+-+.+|++++ +.| .+|+= ..++++++...++.+.+
T Consensus 136 i~~GAdEIDmVINig~------lk~g~~~~v~~eI~~V~~a~---------~~~-~lKVIlEt~~Lt~eei~~A~~ia~e 199 (288)
T 3oa3_A 136 MQNGASELDMVMNYPW------LSEKRYTDVFQDIRAVRLAA---------KDA-ILKVILETSQLTADEIIAGCVLSSL 199 (288)
T ss_dssp HHTTCSEEEEECCHHH------HHTTCHHHHHHHHHHHHHHT---------TTS-EEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEeehhh------hcCCcHHHHHHHHHHHHHHh---------cCC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence 344589877 56532 11123356667777777765 224 47764 34778899999999999
Q ss_pred cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 341 LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 341 ~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
+|+|.|-.+ |.+. .+|- .....++++++.+..+.+++|.++|||.+.+||+++|++||+-+
T Consensus 200 aGADfVKTS-TGf~-------------~~GA-----T~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 200 AGADYVKTS-TGFN-------------GPGA-----SIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp TTCSEEECC-CSSS-------------SCCC-----CHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred cCCCEEEcC-CCCC-------------CCCC-----CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 999998644 3211 1121 12233444444433356899999999999999999999999987
Q ss_pred EEchhh
Q 012517 421 QLYTAF 426 (462)
Q Consensus 421 qv~Tal 426 (462)
...++.
T Consensus 261 GtS~g~ 266 (288)
T 3oa3_A 261 GASAGV 266 (288)
T ss_dssp EESCHH
T ss_pred ehhhHH
Confidence 665554
No 100
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.40 E-value=4.4e-06 Score=77.94 Aligned_cols=154 Identities=16% Similarity=0.136 Sum_probs=98.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
++.+++.-. ..++ .+++.+..++ +|++.+....+ .+.+.++++.+++. ..++++
T Consensus 55 ~i~~~~~~~-~~~~---~~~~~~~~~G--ad~v~v~~~~~----------~~~~~~~~~~~~~~----------g~~~~v 108 (211)
T 3f4w_A 55 EVLADAKIM-DGGH---FESQLLFDAG--ADYVTVLGVTD----------VLTIQSCIRAAKEA----------GKQVVV 108 (211)
T ss_dssp EEEEEEEEC-SCHH---HHHHHHHHTT--CSEEEEETTSC----------HHHHHHHHHHHHHH----------TCEEEE
T ss_pred EEEEEEEec-cchH---HHHHHHHhcC--CCEEEEeCCCC----------hhHHHHHHHHHHHc----------CCeEEE
Confidence 566776432 1222 3455555555 99999965321 13455666666543 456666
Q ss_pred Ee-cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 321 KI-APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 321 Ki-spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
-+ +|. +..+.++.+.+.|+|.|.+.+...+. .. + +..++.++++++.++ ++||+.
T Consensus 109 ~~~~~~----t~~~~~~~~~~~g~d~i~v~~g~~g~-----------~~----~----~~~~~~i~~l~~~~~-~~~i~~ 164 (211)
T 3f4w_A 109 DMICVD----DLPARVRLLEEAGADMLAVHTGTDQQ-----------AA----G----RKPIDDLITMLKVRR-KARIAV 164 (211)
T ss_dssp ECTTCS----SHHHHHHHHHHHTCCEEEEECCHHHH-----------HT----T----CCSHHHHHHHHHHCS-SCEEEE
T ss_pred EecCCC----CHHHHHHHHHHcCCCEEEEcCCCccc-----------cc----C----CCCHHHHHHHHHHcC-CCcEEE
Confidence 42 332 44566788889999997654221000 00 0 124678889998874 699999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHH
Q 012517 400 CGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLER 447 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~ 447 (462)
.|||+ ++++.+++++|||.|.++|+++ +.++ +.+..+++.+.+++
T Consensus 165 ~gGI~-~~~~~~~~~~Gad~vvvGsai~-~~~d-~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 165 AGGIS-SQTVKDYALLGPDVVIVGSAIT-HAAD-PAGEARKISQVLLQ 209 (211)
T ss_dssp ESSCC-TTTHHHHHTTCCSEEEECHHHH-TCSS-HHHHHHHHHHHHHH
T ss_pred ECCCC-HHHHHHHHHcCCCEEEECHHHc-CCCC-HHHHHHHHHHHHhh
Confidence 99996 9999999999999999999985 4566 33444455555543
No 101
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.37 E-value=7.9e-07 Score=85.05 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
...++++.+.+.|++.|++++++.. |..+|. .++.++++++.+ ++|||+.|||.+++|+
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~--------------g~~~g~-----~~~~i~~l~~~~--~iPvia~GGI~~~~d~ 203 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKD--------------GTLQEH-----DFSLTKKIAIEA--EVKVLAAGGISSENSL 203 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHH--------------HHTCCC-----CHHHHHHHHHHH--TCEEEEESSCCSHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEeeccc--------------ccCCcC-----CHHHHHHHHHhc--CCcEEEECCCCCHHHH
Confidence 4678888899999999999876421 122332 478899999988 7999999999999999
Q ss_pred HHHHHh-----C-CCEEEEchhhhhcCCChHHHHHHH
Q 012517 410 YRKIRA-----G-ATLVQLYTAFAYGGPALIPQIKAE 440 (462)
Q Consensus 410 ~e~i~a-----G-Ad~Vqv~Tali~~GP~~i~~i~~~ 440 (462)
.+++++ | |+.|+++|+++ +++.-+.++++.
T Consensus 204 ~~~~~~~~~~~G~adgv~vgsal~-~~~~~~~~~~~~ 239 (241)
T 1qo2_A 204 KTAQKVHTETNGLLKGVIVGRAFL-EGILTVEVMKRY 239 (241)
T ss_dssp HHHHHHHHHTTTSEEEEEECHHHH-TTSSCHHHHHHH
T ss_pred HHHHhcccccCCeEeEEEeeHHHH-cCCCCHHHHHHH
Confidence 999998 9 99999999996 467767666553
No 102
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.36 E-value=9.2e-06 Score=79.67 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=84.2
Q ss_pred HHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHH
Q 012517 260 VQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAV 339 (462)
Q Consensus 260 ~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~ 339 (462)
++.+..++ ||++-+.... + ..+.+.++++..++ + ...+++-+. +. .+ ++.+.
T Consensus 128 v~~A~~~G--AD~VlLi~a~--------l-~~~~l~~l~~~a~~----l------Gl~~lvev~---t~---ee-~~~A~ 179 (272)
T 3qja_A 128 IHEARAHG--ADMLLLIVAA--------L-EQSVLVSMLDRTES----L------GMTALVEVH---TE---QE-ADRAL 179 (272)
T ss_dssp HHHHHHTT--CSEEEEEGGG--------S-CHHHHHHHHHHHHH----T------TCEEEEEES---SH---HH-HHHHH
T ss_pred HHHHHHcC--CCEEEEeccc--------C-CHHHHHHHHHHHHH----C------CCcEEEEcC---CH---HH-HHHHH
Confidence 45555555 9999987542 1 12345666665543 1 567777663 22 23 34455
Q ss_pred HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCE
Q 012517 340 ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATL 419 (462)
Q Consensus 340 ~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~ 419 (462)
+.|+|.|-++|+.... ++..++.+.++.+.++.++|+|+.|||.|++|+.+++++||+.
T Consensus 180 ~~Gad~IGv~~r~l~~---------------------~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~Gadg 238 (272)
T 3qja_A 180 KAGAKVIGVNARDLMT---------------------LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADA 238 (272)
T ss_dssp HHTCSEEEEESBCTTT---------------------CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HCCCCEEEECCCcccc---------------------cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCE
Confidence 7799999888753110 0112345677888887679999999999999999999999999
Q ss_pred EEEchhhhhcCCC
Q 012517 420 VQLYTAFAYGGPA 432 (462)
Q Consensus 420 Vqv~Tali~~GP~ 432 (462)
|.|+++++. .++
T Consensus 239 vlVGsal~~-a~d 250 (272)
T 3qja_A 239 VLVGEGLVT-SGD 250 (272)
T ss_dssp EEECHHHHT-CSC
T ss_pred EEEcHHHhC-CCC
Confidence 999999975 455
No 103
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.34 E-value=2.3e-06 Score=82.27 Aligned_cols=122 Identities=23% Similarity=0.234 Sum_probs=86.1
Q ss_pred cccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe---cCCCChhhHHHHHHHHHHc
Q 012517 267 SQYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI---APDLSKEDLEDIAAVAVAL 341 (462)
Q Consensus 267 ~~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi---spdl~~~~~~~ia~~~~~~ 341 (462)
...||.|.+ |++. +. -.+.+.+.+-+.+|+++++ +. .+|+ +..++++++...++.+.++
T Consensus 106 ~~GAdEIDmViNig~-----lk-~g~~~~v~~eI~~v~~a~~--------~~--~lKVIlEt~~Lt~eei~~a~~ia~~a 169 (239)
T 3ngj_A 106 EQGAEEVDMVINIGM-----VK-AKKYDDVEKDVKAVVDASG--------KA--LTKVIIECCYLTNEEKVEVCKRCVAA 169 (239)
T ss_dssp HTTCSEEEEECCHHH-----HH-TTCHHHHHHHHHHHHHHHT--------TS--EEEEECCGGGSCHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEeehHH-----hc-cccHHHHHHHHHHHHHHhc--------CC--ceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 345888775 5431 11 1233566677777777762 22 4554 2347888999999999999
Q ss_pred CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEE
Q 012517 342 RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQ 421 (462)
Q Consensus 342 GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vq 421 (462)
|+|.|-.+ |.+. .|| .+.+.++.+++.++.+++|.++|||.+.+||++++++||+-+.
T Consensus 170 GADfVKTS-TGf~-------------~gg--------At~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riG 227 (239)
T 3ngj_A 170 GAEYVKTS-TGFG-------------THG--------ATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIG 227 (239)
T ss_dssp TCSEEECC-CSSS-------------SCC--------CCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEE
T ss_pred CcCEEECC-CCCC-------------CCC--------CCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhccccee
Confidence 99998643 2111 122 2567788888888878999999999999999999999999887
Q ss_pred Echhh
Q 012517 422 LYTAF 426 (462)
Q Consensus 422 v~Tal 426 (462)
..++.
T Consensus 228 tS~~~ 232 (239)
T 3ngj_A 228 ASAGI 232 (239)
T ss_dssp ESCHH
T ss_pred cccHH
Confidence 76654
No 104
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.25 E-value=5.8e-06 Score=87.39 Aligned_cols=125 Identities=17% Similarity=0.146 Sum_probs=85.8
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++|+++|=-. +. +-+..+. |+|+|.+ +...+. ... .....|+..+. ..++..++++.+.. +
T Consensus 268 ~vpvi~k~v~--~~----~~a~~l~--G~d~v~v-g~g~g~---~~~---~r~~~~~g~~~--~~~l~~~~~~~~~~--~ 328 (486)
T 2cu0_A 268 DADFIVGNIA--NP----KAVDDLT--FADAVKV-GIGPGS---ICT---TRIVAGVGVPQ--ITAVAMVADRAQEY--G 328 (486)
T ss_dssp CSEEEEEEEC--CH----HHHTTCT--TSSEEEE-CSSCST---TBC---HHHHTCCCCCH--HHHHHHHHHHHHHH--T
T ss_pred CCccccCCcC--CH----HHHHHhh--CCCeEEE-eeeecc---cee---eeEEeecCcch--HHHHHHHHHHHHHc--C
Confidence 6899988654 21 2233334 9999998 221110 000 00112322222 24556667777766 6
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh----------------------------------------------
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY---------------------------------------------- 428 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~---------------------------------------------- 428 (462)
+|||+.|||.++.|+.++|.+|||+||++|.|+.
T Consensus 329 vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~ 408 (486)
T 2cu0_A 329 LYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRK 408 (486)
T ss_dssp CEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSC
T ss_pred CcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhccccccccccccccccc
Confidence 9999999999999999999999999999999982
Q ss_pred ---cCC-----------ChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 429 ---GGP-----------ALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 429 ---~GP-----------~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
+|. .++..+..+|+..|...|..++.|+..
T Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~ 452 (486)
T 2cu0_A 409 FVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKE 452 (486)
T ss_dssp SSCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred ccccceEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHh
Confidence 221 166777888899999999999999874
No 105
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.24 E-value=3.9e-06 Score=80.46 Aligned_cols=91 Identities=25% Similarity=0.272 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
.+..++++.++++|+|.|.+++.... + .+ .....+.++++++.+ ++||+..|||.++++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~--------------~--~~---~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~ 88 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITAS--------------V--EK---RKTMLELVEKVAEQI--DIPFTVGGGIHDFET 88 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCS--------------S--SH---HHHHHHHHHHHHTTC--CSCEEEESSCCSHHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchh--------------h--cC---CcccHHHHHHHHHhC--CCCEEEeCCCCCHHH
Confidence 36788999999999999998853210 0 01 224578889999887 799999999999999
Q ss_pred HHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 409 AYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+++++|||.|.++++.+. +|.++.++.+.+
T Consensus 89 ~~~~~~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 120 (253)
T 1thf_D 89 ASELILRGADKVSINTAAVE-NPSLITQIAQTF 120 (253)
T ss_dssp HHHHHHTTCSEEEESHHHHH-CTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHh-ChHHHHHHHHHc
Confidence 99999999999999999975 698887776654
No 106
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.24 E-value=4.5e-06 Score=79.23 Aligned_cols=91 Identities=26% Similarity=0.249 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..++++.+.+.|+|+|++++.... + +-.+...+.++++++.+ ++||++.|||.++++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~---------------~----~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~ 91 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAA---------------P----EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLED 91 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCC---------------T----TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcc---------------c----cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHH
Confidence 36788999999999999999864210 0 01223578889999988 799999999999999
Q ss_pred HHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 409 AYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+++++|||.|.+++.++. +|.++.++.+.+
T Consensus 92 ~~~~~~~Gad~V~i~~~~~~-~~~~~~~~~~~~ 123 (253)
T 1h5y_A 92 ATTLFRAGADKVSVNTAAVR-NPQLVALLAREF 123 (253)
T ss_dssp HHHHHHHTCSEEEESHHHHH-CTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHhh-CcHHHHHHHHHc
Confidence 99999999999999999964 798888776553
No 107
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.22 E-value=4.5e-06 Score=79.99 Aligned_cols=91 Identities=22% Similarity=0.227 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..++++.+.+.|+|.|.++.... ++. + .....+.++++++.+ ++|||..|||.+.++
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~---------------~~~-~---~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~ 89 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISA---------------THE-E---RAILLDVVARVAERV--FIPLTVGGGVRSLED 89 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCS---------------STT-C---HHHHHHHHHHHHTTC--CSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCc---------------ccc-C---ccccHHHHHHHHHhC--CCCEEEECCcCCHHH
Confidence 3788999999999999998884321 010 1 223567889999988 799999999999999
Q ss_pred HHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 409 AYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+++++|||.|.++++++. +|.++.++.+..
T Consensus 90 ~~~~~~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 121 (252)
T 1ka9_F 90 ARKLLLSGADKVSVNSAAVR-RPELIRELADHF 121 (252)
T ss_dssp HHHHHHHTCSEEEECHHHHH-CTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHh-CcHHHHHHHHHc
Confidence 99999999999999999974 798888877654
No 108
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.22 E-value=1.6e-05 Score=74.24 Aligned_cols=157 Identities=13% Similarity=0.128 Sum_probs=95.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+|... +.+ ++.+.++.+.+ .+|+|++...+|+. .+.++.+++.. +.|++
T Consensus 8 ~i~~~i~~~--d~~---~~~~~~~~~~~~G~~~i~l~~~~~~~------------~~~i~~i~~~~---------~~~l~ 61 (212)
T 2v82_A 8 PLIAILRGI--TPD---EALAHVGAVIDAGFDAVEIPLNSPQW------------EQSIPAIVDAY---------GDKAL 61 (212)
T ss_dssp CEEEECTTC--CHH---HHHHHHHHHHHHTCCEEEEETTSTTH------------HHHHHHHHHHH---------TTTSE
T ss_pred CEEEEEeCC--CHH---HHHHHHHHHHHCCCCEEEEeCCChhH------------HHHHHHHHHhC---------CCCeE
Confidence 577777542 445 55555665544 49999998876531 13334443322 46888
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccC------CCC--CCC--CC---cccccCCCCCCcCc---cchHHH
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISR------PDP--VSK--NP---VAKETGGLSGKPLL---SLSNNI 383 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r------~~~--~~~--~~---~~~~~GGlSG~~l~---~~al~~ 383 (462)
|....-.+. +-++.+.+.|+|+|++.+..... .+. +.. .+ ......|...--++ +..++.
T Consensus 62 vg~g~~~~~----~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~ 137 (212)
T 2v82_A 62 IGAGTVLKP----EQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQY 137 (212)
T ss_dssp EEEECCCSH----HHHHHHHHTTCCEEECSSCCHHHHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHH
T ss_pred EEeccccCH----HHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHH
Confidence 865544443 24677888999999855432110 000 000 00 00011222211112 235678
Q ss_pred HHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 384 LKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 384 v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++++++.++.++||++.|||+ .+++.+++++||+.|.++|+++.
T Consensus 138 ~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 138 IKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCC
T ss_pred HHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 888888874359999999997 99999999999999999999964
No 109
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.21 E-value=1.9e-05 Score=76.96 Aligned_cols=146 Identities=19% Similarity=0.213 Sum_probs=94.5
Q ss_pred HHHHHHHcccCcEEEEeccCCCCC----CcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 260 VQGVHTLSQYADYLVINVSSPNTP----GLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 260 ~~~~~~l~~~aD~leiNvSsPnt~----glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++.++.++ |..+.+...||..- |...+++++. +++|+++ .++||+-|..-.. ..-+
T Consensus 24 a~iae~aG--a~av~~l~~~p~d~r~~gGv~Rm~dp~~----I~~I~~a---------VsIPVm~k~righ-----~~EA 83 (291)
T 3o07_A 24 AKIAEKSG--ACAVMALESIPADMRKSGKVCRMSDPKM----IKDIMNS---------VSIPVMAKVRIGH-----FVEA 83 (291)
T ss_dssp HHHHHHHT--CSEEEECSSCHHHHHTTTCCCCCCCHHH----HHHHHTT---------CSSCEEEEEETTC-----HHHH
T ss_pred HHHHHHhC--chhhhhccCCCchhhhcCCccccCCHHH----HHHHHHh---------CCCCeEEEEecCc-----HHHH
Confidence 44555555 89999999999642 2223455554 4445443 3799999998642 2346
Q ss_pred HHHHHcCCcEEEEecCCccCCCC---CCC----CCc--------------------ccccC-------------------
Q 012517 336 AVAVALRLDGLIISNTTISRPDP---VSK----NPV--------------------AKETG------------------- 369 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~---~~~----~~~--------------------~~~~G------------------- 369 (462)
+.+++.|+|.|..|....- .+. +.. .++ -..+|
T Consensus 84 qilea~GaD~IDesevltp-ad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~ 162 (291)
T 3o07_A 84 QIIEALEVDYIDESEVLTP-ADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITE 162 (291)
T ss_dssp HHHHHTTCSEEEEETTSCC-SCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEecccCCCH-HHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHH
Confidence 7888999999987753110 010 000 010 00111
Q ss_pred ------CC-CCCcC------ccchHHHHHHHHHhcCCCccE--EEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 370 ------GL-SGKPL------LSLSNNILKEMYLLTRGKIPL--IGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 370 ------Gl-SG~~l------~~~al~~v~~i~~~~~~~ipI--Ig~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
|| ...-+ .....++++++++.. ++|| |+.|||.|++||.+++++|||.|+++|+++.
T Consensus 163 ~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 163 EIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred HHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 22 11101 123468899999886 7888 5689999999999999999999999999974
No 110
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.21 E-value=6.4e-05 Score=73.22 Aligned_cols=142 Identities=20% Similarity=0.213 Sum_probs=93.0
Q ss_pred cCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC-------CChhhHHHHHHHHH
Q 012517 269 YADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD-------LSKEDLEDIAAVAV 339 (462)
Q Consensus 269 ~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd-------l~~~~~~~ia~~~~ 339 (462)
.+|.+.+ |+.+.+ .+...+.+.++++++++. ..|+++=.-++ .+.+++...++.+.
T Consensus 105 Ga~~v~~~~nig~~~---------~~~~~~~~~~v~~~~~~~------~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~ 169 (263)
T 1w8s_A 105 GASAVGYTIYPGSGF---------EWKMFEELARIKRDAVKF------DLPLVVESFPRGGKVVNETAPEIVAYAARIAL 169 (263)
T ss_dssp TCSEEEEEECTTSTT---------HHHHHHHHHHHHHHHHHH------TCCEEEEECCCSTTCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCcC---------HHHHHHHHHHHHHHHHHc------CCeEEEEeeCCCCccccCCCHHHHHHHHHHHH
Confidence 4787665 555321 234455556666665432 57877643331 15567777789999
Q ss_pred HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCC--CHHHHHHHH----
Q 012517 340 ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGIS--SGEDAYRKI---- 413 (462)
Q Consensus 340 ~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~--s~~dA~e~i---- 413 (462)
+.|+|.|-++ ++ + ..+.++++++.++ .+||+++|||. +.+|+++++
T Consensus 170 ~~GAD~vkt~-~~----------------~----------~~e~~~~~~~~~~-~~pV~asGGi~~~~~~~~l~~i~~~~ 221 (263)
T 1w8s_A 170 ELGADAMKIK-YT----------------G----------DPKTFSWAVKVAG-KVPVLMSGGPKTKTEEDFLKQVEGVL 221 (263)
T ss_dssp HHTCSEEEEE-CC----------------S----------SHHHHHHHHHHTT-TSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred HcCCCEEEEc-CC----------------C----------CHHHHHHHHHhCC-CCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 9999998776 21 0 2466888888873 45999999999 999999999
Q ss_pred HhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhh
Q 012517 414 RAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAV 457 (462)
Q Consensus 414 ~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~ 457 (462)
++||+.+.++++++. .++ +.+..+.|.+.+. .-.|++|+.
T Consensus 222 ~aGA~GvsvgraI~~-~~d-p~~~~~~l~~~v~--~~~~~~ea~ 261 (263)
T 1w8s_A 222 EAGALGIAVGRNVWQ-RRD-ALKFARALAELVY--GGKKLAEPL 261 (263)
T ss_dssp HTTCCEEEESHHHHT-STT-HHHHHHHHHHHHC-----------
T ss_pred HcCCeEEEEehhhcC-CcC-HHHHHHHHHHHHh--cCCCHHHHh
Confidence 899999999999964 465 6666677776654 235666653
No 111
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.19 E-value=2.4e-05 Score=75.94 Aligned_cols=120 Identities=21% Similarity=0.192 Sum_probs=85.2
Q ss_pred cccCcEEEE--eccCCCCCCccccc--CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEec---CCCChhhHHHHHHHHH
Q 012517 267 SQYADYLVI--NVSSPNTPGLRMLQ--GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA---PDLSKEDLEDIAAVAV 339 (462)
Q Consensus 267 ~~~aD~lei--NvSsPnt~glr~lq--~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis---pdl~~~~~~~ia~~~~ 339 (462)
...||-|.+ |++. +. +.+.+.+-+.+|++++ .+.| +|+= ..++++++...++.+.
T Consensus 122 ~~GAdEIDmViNig~--------lk~g~~~~v~~eI~~v~~a~--------~~~~--lKVIlEt~~Lt~eei~~A~~ia~ 183 (260)
T 3r12_A 122 ESGADEIDMVINVGM--------LKAKEWEYVYEDIRSVVESV--------KGKV--VKVIIETCYLDTEEKIAACVISK 183 (260)
T ss_dssp HHTCSEEEEECCHHH--------HHTTCHHHHHHHHHHHHHHT--------TTSE--EEEECCGGGCCHHHHHHHHHHHH
T ss_pred HcCCCEEEEEeehhh--------hccccHHHHHHHHHHHHHhc--------CCCc--EEEEEeCCCCCHHHHHHHHHHHH
Confidence 345887765 5532 21 3355666667777664 1333 4653 3478889999999999
Q ss_pred HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCE
Q 012517 340 ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATL 419 (462)
Q Consensus 340 ~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~ 419 (462)
++|+|.|-.+ |.+. .|| .+++.++.+++.++++++|-++|||.|.+||+++|++||+-
T Consensus 184 eaGADfVKTS-TGf~-------------~~G--------AT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~R 241 (260)
T 3r12_A 184 LAGAHFVKTS-TGFG-------------TGG--------ATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADR 241 (260)
T ss_dssp HTTCSEEECC-CSSS-------------SCC--------CCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HhCcCEEEcC-CCCC-------------CCC--------CCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 9999998644 3211 112 25677888888888899999999999999999999999997
Q ss_pred EEEchhh
Q 012517 420 VQLYTAF 426 (462)
Q Consensus 420 Vqv~Tal 426 (462)
+...++.
T Consensus 242 iGtS~g~ 248 (260)
T 3r12_A 242 IGTSSGV 248 (260)
T ss_dssp EEESCHH
T ss_pred eecchHH
Confidence 7655543
No 112
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.19 E-value=1.1e-05 Score=78.30 Aligned_cols=160 Identities=19% Similarity=0.195 Sum_probs=95.6
Q ss_pred HHHHHHHHHcc-cCcEEEEec--cCCCCCC-------cccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE--Eec--
Q 012517 258 DYVQGVHTLSQ-YADYLVINV--SSPNTPG-------LRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV--KIA-- 323 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNv--SsPnt~g-------lr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v--Kis-- 323 (462)
...+.++.+.+ .||.|||.+ |-|...| .|.|++.-.+..+++.+++.+ .+.|+++ -..
T Consensus 29 ~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r--------~~~Pivlm~Y~N~i 100 (252)
T 3tha_A 29 TSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIK--------TKKALVFMVYYNLI 100 (252)
T ss_dssp HHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCC--------CSSEEEEECCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHh--------cCCCEEEEeccCHH
Confidence 56666666665 499999985 6666554 234555545667777776543 1368765 222
Q ss_pred ----------------------CCCChhhHHHHHHHHHHcCCcEEEEec-CC-ccCCCC---CC-CCCcccccCCCCCCc
Q 012517 324 ----------------------PDLSKEDLEDIAAVAVALRLDGLIISN-TT-ISRPDP---VS-KNPVAKETGGLSGKP 375 (462)
Q Consensus 324 ----------------------pdl~~~~~~~ia~~~~~~GvdgIivsN-Tt-~~r~~~---~~-~~~~~~~~GGlSG~~ 375 (462)
||+..|+..++.+.+.+.|++-|.+.. |+ ..|... .. ........-|..|..
T Consensus 101 ~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~ 180 (252)
T 3tha_A 101 FSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTK 180 (252)
T ss_dssp HHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCS
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcc
Confidence 455555555555555666655544322 22 111100 00 000011112444542
Q ss_pred --CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 376 --LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 376 --l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+.+...+.++++++.+ ++|++.-+||.+++++.+... +||.|-++|+++.
T Consensus 181 ~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 181 SVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred cCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 1222357889999887 799999999999999988765 6999999999974
No 113
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.18 E-value=4.4e-05 Score=72.83 Aligned_cols=196 Identities=16% Similarity=0.239 Sum_probs=124.0
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|-.+|+=+....+.++.+.+.|..++++.-. .|.--|. +. .|. .+++.+++...
T Consensus 9 psila~D~~~l~~~i~~~~~~Gad~ihldi~-----DG~fvp~-------------~~---~g~-~~v~~lr~~~~---- 62 (230)
T 1tqj_A 9 PSILSADFSRLGEEIKAVDEAGADWIHVDVM-----DGRFVPN-------------IT---IGP-LIVDAIRPLTK---- 62 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE-----BSSSSSC-------------BC---BCH-HHHHHHGGGCC----
T ss_pred EEeeecCHhHHHHHHHHHHHcCCCEEEEEEE-----ecCCCcc-------------hh---hhH-HHHHHHHhhcC----
Confidence 4445555677888999999999999988752 2222111 11 233 45566654311
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEecc--CCCCCCcccccCchHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVS--SPNTPGLRMLQGRKQLK 295 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvS--sPnt~glr~lq~~~~l~ 295 (462)
.++.+-+.-| +++ +|++.+..++ ||++.+... ++ +...
T Consensus 63 ----------------------~~~~vhlmv~--dp~---~~i~~~~~aG--adgv~vh~e~~~~-----------~~~~ 102 (230)
T 1tqj_A 63 ----------------------KTLDVHLMIV--EPE---KYVEDFAKAG--ADIISVHVEHNAS-----------PHLH 102 (230)
T ss_dssp ----------------------SEEEEEEESS--SGG---GTHHHHHHHT--CSEEEEECSTTTC-----------TTHH
T ss_pred ----------------------CcEEEEEEcc--CHH---HHHHHHHHcC--CCEEEECcccccc-----------hhHH
Confidence 1456666544 454 6777777776 999999865 32 2244
Q ss_pred HHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCc
Q 012517 296 DLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKP 375 (462)
Q Consensus 296 ~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~ 375 (462)
++++.+++. +.-+.+=+.|..+.+.+..+. .++|.|.+. +. .+|.+|..
T Consensus 103 ~~~~~i~~~----------g~~~gv~~~p~t~~e~~~~~~-----~~~D~v~~m-sv---------------~pg~ggq~ 151 (230)
T 1tqj_A 103 RTLCQIREL----------GKKAGAVLNPSTPLDFLEYVL-----PVCDLILIM-SV---------------NPGFGGQS 151 (230)
T ss_dssp HHHHHHHHT----------TCEEEEEECTTCCGGGGTTTG-----GGCSEEEEE-SS---------------CC----CC
T ss_pred HHHHHHHHc----------CCcEEEEEeCCCcHHHHHHHH-----hcCCEEEEE-Ee---------------ccccCCcc
Confidence 666666542 556777777765544433322 368966443 21 11222333
Q ss_pred CccchHHHHHHHHHhcC---CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC
Q 012517 376 LLSLSNNILKEMYLLTR---GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 376 l~~~al~~v~~i~~~~~---~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
..+..++.++++++..+ -++||.+-|||+. +++.+.+++|||.+-++|+++. .++
T Consensus 152 ~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~-a~d 209 (230)
T 1tqj_A 152 FIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN-APN 209 (230)
T ss_dssp CCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT-SSC
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC-CCC
Confidence 34567888888888762 2599999999997 9999999999999999999864 566
No 114
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.18 E-value=3.6e-05 Score=76.85 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCCCccE--EEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 381 NNILKEMYLLTRGKIPL--IGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 381 l~~v~~i~~~~~~~ipI--Ig~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++.++++++.. ++|+ |+.|||.|++|+.+++++|||.|.++|+++.
T Consensus 229 lell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 229 YEVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 37888888876 7898 6999999999999999999999999999974
No 115
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.16 E-value=2.7e-05 Score=74.46 Aligned_cols=124 Identities=22% Similarity=0.203 Sum_probs=85.8
Q ss_pred HcccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecC---CC----ChhhHHHHHH
Q 012517 266 LSQYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAP---DL----SKEDLEDIAA 336 (462)
Q Consensus 266 l~~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKisp---dl----~~~~~~~ia~ 336 (462)
+...||-|.+ |++. +. -.+.+.+.+-+.+|++++ .+. .+|+=- .+ +++++...++
T Consensus 90 i~~GAdEIDmVinig~-----lk-~g~~~~v~~ei~~v~~a~--------~~~--~lKvIiEt~~L~~~~t~eei~~a~~ 153 (231)
T 3ndo_A 90 VAAGATEIDMVIDVGA-----AL-AGDLDAVSADITAVRKAV--------RAA--TLKVIVESAALLEFSGEPLLADVCR 153 (231)
T ss_dssp HHTTCSEEEEECCHHH-----HH-TTCHHHHHHHHHHHHHHT--------TTS--EEEEECCHHHHHHHTCHHHHHHHHH
T ss_pred HHcCCCEEEEEeehHh-----hh-cccHHHHHHHHHHHHHHc--------cCC--ceEEEEECcccCCCCCHHHHHHHHH
Confidence 3445888765 5532 00 023355666677777765 123 347543 36 7889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.++|+|.|-.+ |.+. ..|| .+++-++.+++.++++++|-++|||.+.+||+++|++|
T Consensus 154 ia~~aGADfVKTS-TGf~------------~~~g--------At~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aG 212 (231)
T 3ndo_A 154 VARDAGADFVKTS-TGFH------------PSGG--------ASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAG 212 (231)
T ss_dssp HHHHTTCSEEECC-CSCC------------TTCS--------CCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHCcCEEEcC-CCCC------------CCCC--------CCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhc
Confidence 9999999998633 3111 0122 25678888888888899999999999999999999999
Q ss_pred CCEEEEchhh
Q 012517 417 ATLVQLYTAF 426 (462)
Q Consensus 417 Ad~Vqv~Tal 426 (462)
|+-+...++.
T Consensus 213 a~RiGtS~g~ 222 (231)
T 3ndo_A 213 ATRLGLSGSR 222 (231)
T ss_dssp CSEEEESSHH
T ss_pred chhcccchHH
Confidence 9977665543
No 116
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.13 E-value=3.5e-05 Score=78.78 Aligned_cols=134 Identities=13% Similarity=0.112 Sum_probs=103.1
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .+|.+.+++.+ +.+...+++++|+++. + +.||.++....++.++..++++
T Consensus 150 ~~~~~a~~~~~~Gf~~iKik~g~----------~~~~~~e~v~avr~a~-------g-d~~l~vD~n~~~~~~~a~~~~~ 211 (384)
T 2pgw_A 150 ELARDAAVGHAQGERVFYLKVGR----------GEKLDLEITAAVRGEI-------G-DARLRLDANEGWSVHDAINMCR 211 (384)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS----------CHHHHHHHHHHHHTTS-------T-TCEEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECcCC----------CHHHHHHHHHHHHHHc-------C-CcEEEEecCCCCCHHHHHHHHH
Confidence 67777776654 59999999875 2345567777777653 4 7899998877788888999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- + | +.+...+..+++++.+ ++||++.+.+.+.+++.+.++.|
T Consensus 212 ~l~~~~i~~iE---------q-----P------------~~~~~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~ 263 (384)
T 2pgw_A 212 KLEKYDIEFIE---------Q-----P------------TVSWSIPAMAHVREKV--GIPIVADQAAFTLYDVYEICRQR 263 (384)
T ss_dssp HHGGGCCSEEE---------C-----C------------SCTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHTT
T ss_pred HHHhcCCCEEe---------C-----C------------CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcC
Confidence 99999998763 1 0 1123467788999988 79999999999999999999987
Q ss_pred -CCEEEEchhhhhcCCChHHHHH
Q 012517 417 -ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
+|+||+-.+-+ .|+.-..++.
T Consensus 264 ~~d~v~ik~~~~-GGit~~~~i~ 285 (384)
T 2pgw_A 264 AADMICIGPREI-GGIQPMMKAA 285 (384)
T ss_dssp CCSEEEECHHHH-TSHHHHHHHH
T ss_pred CCCEEEEcchhh-CCHHHHHHHH
Confidence 99999988774 4655444543
No 117
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.13 E-value=1.4e-05 Score=75.28 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=66.9
Q ss_pred HHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 335 AAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 335 a~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
+..+.+.|+|.|.+.+...... ..|+ .+..++.++++++.+ ++||++.||| +++++.++++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~----------~~g~------~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~ 183 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDC----------KKGL------EGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQ 183 (221)
T ss_dssp HHHHHHTTCSEEEEECCC--------------------------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHH
T ss_pred HHHHHhCCCCEEEECCccccCC----------CCCC------CCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHH
Confidence 4566789999998876421100 1111 134578888888887 7999999999 9999999999
Q ss_pred hCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 415 AGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 415 aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
+||+.|.++|+++. .++ +.+..+++.+.+++.++
T Consensus 184 ~Ga~gv~vgs~i~~-~~d-~~~~~~~~~~~~~~~~~ 217 (221)
T 1yad_A 184 AGADGIAVMSGIFS-SAE-PLEAARRYSRKLKEMRY 217 (221)
T ss_dssp TTCSEEEESHHHHT-SSS-HHHHHHHHHHHHHHHC-
T ss_pred cCCCEEEEhHHhhC-CCC-HHHHHHHHHHHHHHhhh
Confidence 99999999999964 455 44555556666666554
No 118
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.12 E-value=0.00013 Score=68.90 Aligned_cols=196 Identities=21% Similarity=0.275 Sum_probs=118.1
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|+.+++-++...+.++.+.+.|.-+++++-. .|.--|. + + .|. ..++.|++...
T Consensus 15 p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~-----dg~f~~~----------~-~-----~~~-~~i~~l~~~~~---- 68 (230)
T 1rpx_A 15 PSILSANFSKLGEQVKAIEQAGCDWIHVDVM-----DGRFVPN----------I-T-----IGP-LVVDSLRPITD---- 68 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEE-----BSSSSSC----------B-C-----CCH-HHHHHHGGGCC----
T ss_pred EEeecCCHHHHHHHHHHHHHCCCCEEEEeec-----cCCcccc----------c-c-----cCH-HHHHHHHhccC----
Confidence 5555555666678899999999999988641 1111010 0 1 222 34455543210
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEecc--CCCCCCcccccCchHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVS--SPNTPGLRMLQGRKQLK 295 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvS--sPnt~glr~lq~~~~l~ 295 (462)
.++.+-+.-| +++ +|++.+..++ +|++.++.. .+ +.+.
T Consensus 69 ----------------------~~~~v~l~vn--d~~---~~v~~~~~~G--ad~v~vh~~~~~~-----------~~~~ 108 (230)
T 1rpx_A 69 ----------------------LPLDVHLMIV--EPD---QRVPDFIKAG--ADIVSVHCEQSST-----------IHLH 108 (230)
T ss_dssp ----------------------SCEEEEEESS--SHH---HHHHHHHHTT--CSEEEEECSTTTC-----------SCHH
T ss_pred ----------------------CcEEEEEEec--CHH---HHHHHHHHcC--CCEEEEEecCccc-----------hhHH
Confidence 1344445444 233 6777666655 999998865 32 1234
Q ss_pred HHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCc
Q 012517 296 DLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKP 375 (462)
Q Consensus 296 ~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~ 375 (462)
++++.+++. ...+++=+.|..+.+.+..+ ..++|.|.+.... .|+.|..
T Consensus 109 ~~~~~~~~~----------g~~ig~~~~p~t~~e~~~~~-----~~~~d~vl~~~~~----------------pg~~g~~ 157 (230)
T 1rpx_A 109 RTINQIKSL----------GAKAGVVLNPGTPLTAIEYV-----LDAVDLVLIMSVN----------------PGFGGQS 157 (230)
T ss_dssp HHHHHHHHT----------TSEEEEEECTTCCGGGGTTT-----TTTCSEEEEESSC----------------TTCSSCC
T ss_pred HHHHHHHHc----------CCcEEEEeCCCCCHHHHHHH-----HhhCCEEEEEEEc----------------CCCCCcc
Confidence 555555431 45677777776554443322 2578976433211 1233433
Q ss_pred CccchHHHHHHHHHhcC---CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC
Q 012517 376 LLSLSNNILKEMYLLTR---GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 376 l~~~al~~v~~i~~~~~---~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
..+..++.++++++.++ .++||+..|||+ ++++.+.+++||+.|-++|++. +.++
T Consensus 158 ~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~-~a~d 215 (230)
T 1rpx_A 158 FIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF-GAPD 215 (230)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHH-TSSC
T ss_pred ccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhh-CCCC
Confidence 33445667777777652 258999999999 8999999999999999999996 3455
No 119
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.08 E-value=8.6e-05 Score=71.71 Aligned_cols=209 Identities=15% Similarity=0.175 Sum_probs=129.1
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|=.||+-|..-++.++.+.+.|.-++-+--. .|.--|. +. .|. .+.+.|++...
T Consensus 32 pSilsaD~~~L~~~i~~l~~~G~d~lHvDVm-----Dg~FVpn-------------it---~G~-~~v~~lr~~~p---- 85 (246)
T 3inp_A 32 PSILSADLARLGDDVKAVLAAGADNIHFDVM-----DNHYVPN-------------LT---FGP-MVLKALRDYGI---- 85 (246)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEE-----BSSSSSC-------------BC---CCH-HHHHHHHHHTC----
T ss_pred hhhhcCChhhHHHHHHHHHHcCCCEEEEEec-----CCCcCcc-------------hh---cCH-HHHHHHHHhCC----
Confidence 3344455666789999999999877765221 1211111 11 233 34555665421
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDL 297 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~l 297 (462)
+.++-+.+.-+ +++ +|++.+..++ ||++.+..-+. +.+.+.
T Consensus 86 ---------------------~~~ldvHLmv~--~p~---~~i~~~~~aG--Ad~itvH~Ea~-----------~~~~~~ 126 (246)
T 3inp_A 86 ---------------------TAGMDVHLMVK--PVD---ALIESFAKAG--ATSIVFHPEAS-----------EHIDRS 126 (246)
T ss_dssp ---------------------CSCEEEEEECS--SCH---HHHHHHHHHT--CSEEEECGGGC-----------SCHHHH
T ss_pred ---------------------CCeEEEEEeeC--CHH---HHHHHHHHcC--CCEEEEccccc-----------hhHHHH
Confidence 12566777543 454 6777766666 99999986442 124566
Q ss_pred HHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCc
Q 012517 298 VKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLL 377 (462)
Q Consensus 298 l~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~ 377 (462)
++.+++. ..-+.|=+.|..+.+.+.++.+ .+|.|.+- |. .. |+.|....
T Consensus 127 i~~ir~~----------G~k~Gvalnp~Tp~e~l~~~l~-----~vD~VlvM-sV--------------~P-GfgGQ~fi 175 (246)
T 3inp_A 127 LQLIKSF----------GIQAGLALNPATGIDCLKYVES-----NIDRVLIM-SV--------------NP-GFGGQKFI 175 (246)
T ss_dssp HHHHHTT----------TSEEEEEECTTCCSGGGTTTGG-----GCSEEEEE-CS--------------CT-TC--CCCC
T ss_pred HHHHHHc----------CCeEEEEecCCCCHHHHHHHHh-----cCCEEEEe-ee--------------cC-CCCCcccc
Confidence 6666542 4556667888776555544443 48877543 11 01 33455555
Q ss_pred cchHHHHHHHHHhcC---CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHH
Q 012517 378 SLSNNILKEMYLLTR---GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECL 445 (462)
Q Consensus 378 ~~al~~v~~i~~~~~---~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l 445 (462)
+.+++.++++++..+ .+++|...|||+ .+.+.+++++|||.+-++|++. +.++.- +..+++++.+
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf-~a~dp~-~~i~~l~~~i 243 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIF-NSDSYK-QTIDKMRDEL 243 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHH-TSSCHH-HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHh-CCCCHH-HHHHHHHHHH
Confidence 778888888888653 258999999999 7899999999999999999884 445533 2333444433
No 120
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.06 E-value=0.00012 Score=74.33 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=107.3
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++.+ .+|.+.+++.++ +.+...+++++|+++. +.+.+|.|+....++.++..++++
T Consensus 149 ~~~~~a~~~~~~Gf~~iKik~g~~---------~~~~~~e~v~avr~a~-------G~d~~l~vDan~~~~~~~a~~~~~ 212 (371)
T 2ovl_A 149 DLKTQADRFLAGGFRAIKMKVGRP---------DLKEDVDRVSALREHL-------GDSFPLMVDANMKWTVDGAIRAAR 212 (371)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCCS---------SHHHHHHHHHHHHHHH-------CTTSCEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC---------CHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 67776666644 589999999774 2245567888888775 457899999988888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- ++ +.+...+..+++++.+ ++||++.+.+.+.+|+.+.++.|
T Consensus 213 ~l~~~~i~~iE---------qP-----------------~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~ 264 (371)
T 2ovl_A 213 ALAPFDLHWIE---------EP-----------------TIPDDLVGNARIVRES--GHTIAGGENLHTLYDFHNAVRAG 264 (371)
T ss_dssp HHGGGCCSEEE---------CC-----------------SCTTCHHHHHHHHHHH--CSCEEECTTCCSHHHHHHHHHHT
T ss_pred HHHhcCCCEEE---------CC-----------------CCcccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcC
Confidence 99999998762 10 1122467778899888 69999999999999999999987
Q ss_pred -CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 417 -ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
+|+||+-..-+ .|+.-..++. ++.+++|+
T Consensus 265 ~~d~v~ik~~~~-GGi~~~~~i~----~~A~~~gi 294 (371)
T 2ovl_A 265 SLTLPEPDVSNI-GGYTTFRKVA----ALAEANNM 294 (371)
T ss_dssp CCSEECCCTTTT-TSHHHHHHHH----HHHHHTTC
T ss_pred CCCEEeeCcccc-CCHHHHHHHH----HHHHHcCC
Confidence 99999987663 4544444443 33445554
No 121
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.06 E-value=4.2e-06 Score=79.92 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+.+.|+|.|.+++.+.. +..+ ...++.+++++ .+ ++||+..|||.+.+++
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~--------------~~~~-----~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~ 88 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNA--------------IENS-----GENLPVLEKLS-EF--AEHIQIGGGIRSLDYA 88 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHH--------------HHCC-----CTTHHHHHHGG-GG--GGGEEEESSCCSHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeccccc--------------ccCC-----chhHHHHHHHH-hc--CCcEEEECCCCCHHHH
Confidence 6789999999999999998753211 0111 12467788887 66 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++|||.|.++++++. .|+++.++ +.+
T Consensus 89 ~~~~~~Gad~V~lg~~~l~-~p~~~~~~-~~~ 118 (241)
T 1qo2_A 89 EKLRKLGYRRQIVSSKVLE-DPSFLKSL-REI 118 (241)
T ss_dssp HHHHHTTCCEEEECHHHHH-CTTHHHHH-HTT
T ss_pred HHHHHCCCCEEEECchHhh-ChHHHHHH-HHc
Confidence 9999999999999999975 69998888 543
No 122
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.06 E-value=9.4e-05 Score=72.46 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=84.9
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.||.+-++.+. + +.+.+.++++..++. ..-++|-+. + ..+ ++.+.+.|+|-|-+
T Consensus 142 GAD~VlLi~a~--------L-~~~~l~~l~~~a~~l----------Gl~~lvevh---~---~eE-l~~A~~~ga~iIGi 195 (272)
T 3tsm_A 142 GADCILIIMAS--------V-DDDLAKELEDTAFAL----------GMDALIEVH---D---EAE-MERALKLSSRLLGV 195 (272)
T ss_dssp TCSEEEEETTT--------S-CHHHHHHHHHHHHHT----------TCEEEEEEC---S---HHH-HHHHTTSCCSEEEE
T ss_pred CCCEEEEcccc--------c-CHHHHHHHHHHHHHc----------CCeEEEEeC---C---HHH-HHHHHhcCCCEEEE
Confidence 39999998764 2 234566776665542 567777774 2 233 35667899998876
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
.|..... +...++...++.+.++.++|+|+-|||.|++|+.++.++||+.|-|+++++.
T Consensus 196 nnr~l~t---------------------~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 196 NNRNLRS---------------------FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp ECBCTTT---------------------CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHT
T ss_pred CCCCCcc---------------------CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcC
Confidence 6653210 1123566677888887789999999999999999999999999999999975
Q ss_pred cCCChHH
Q 012517 429 GGPALIP 435 (462)
Q Consensus 429 ~GP~~i~ 435 (462)
.++.-.
T Consensus 255 -~~d~~~ 260 (272)
T 3tsm_A 255 -QHDVAA 260 (272)
T ss_dssp -SSCHHH
T ss_pred -CcCHHH
Confidence 455433
No 123
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.04 E-value=0.00012 Score=74.59 Aligned_cols=150 Identities=17% Similarity=0.084 Sum_probs=110.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .++.+.+++.++..+ .+++.+...+++++|+++. +.+++|+|+....++.++..++++
T Consensus 152 ~~~~~a~~~~~~Gf~~iKik~g~~~~~---~~~~~~~~~e~v~avr~a~-------g~d~~l~vDan~~~~~~~a~~~~~ 221 (382)
T 1rvk_A 152 DYGRFAETLVKRGYKGIKLHTWMPPVS---WAPDVKMDLKACAAVREAV-------GPDIRLMIDAFHWYSRTDALALGR 221 (382)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCTTST---TCCCHHHHHHHHHHHHHHH-------CTTSEEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCcCccc---cccchHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 67776666544 589999999875322 3344566678888888775 457899999988888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC-HHHHHHHHHh
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS-GEDAYRKIRA 415 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s-~~dA~e~i~a 415 (462)
.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+ .+++.+.++.
T Consensus 222 ~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~~ 273 (382)
T 1rvk_A 222 GLEKLGFDWIE---------E-----------------PMDEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIKA 273 (382)
T ss_dssp HHHTTTCSEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHHT
T ss_pred HHHhcCCCEEe---------C-----------------CCChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHHc
Confidence 99999998652 1 11122467788899988 799999999999 9999999998
Q ss_pred C-CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 416 G-ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 416 G-Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
| +|+||+--..+ .|..-..++. ++.+++|+
T Consensus 274 ~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~ 304 (382)
T 1rvk_A 274 GACDILRTGVNDV-GGITPALKTM----HLAEAFGM 304 (382)
T ss_dssp TCCSEEEECHHHH-TSHHHHHHHH----HHHHHTTC
T ss_pred CCCCEEeeCchhc-CCHHHHHHHH----HHHHHcCC
Confidence 7 89999977663 4443333332 34445554
No 124
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.01 E-value=5.8e-05 Score=70.92 Aligned_cols=103 Identities=17% Similarity=0.276 Sum_probs=67.3
Q ss_pred EEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccE
Q 012517 318 LLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPL 397 (462)
Q Consensus 318 v~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI 397 (462)
+++.+++. + ..+ +..+.+.|+|.|.++....... ..| .+ .+..++.++++++.++ ++||
T Consensus 117 ~~~~~s~~-t---~~e-~~~a~~~g~d~v~~~~v~~t~~----------~~~--~~---~~~~~~~l~~~~~~~~-~~pv 175 (227)
T 2tps_A 117 MILGVSAH-T---MSE-VKQAEEDGADYVGLGPIYPTET----------KKD--TR---AVQGVSLIEAVRRQGI-SIPI 175 (227)
T ss_dssp SEEEEEEC-S---HHH-HHHHHHHTCSEEEECCSSCCCS----------SSS--CC---CCCTTHHHHHHHHTTC-CCCE
T ss_pred cEEEEecC-C---HHH-HHHHHhCCCCEEEECCCcCCCC----------CCC--CC---CccCHHHHHHHHHhCC-CCCE
Confidence 56777664 2 233 4556688999998743210000 001 01 1234677888888873 4999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEchhhhhc-CC-ChHHHHHHHHH
Q 012517 398 IGCGGISSGEDAYRKIRAGATLVQLYTAFAYG-GP-ALIPQIKAELA 442 (462)
Q Consensus 398 Ig~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~-GP-~~i~~i~~~L~ 442 (462)
++.|||+ ++++.+++++||+.|.++|++... +| ..++++++.++
T Consensus 176 ia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 221 (227)
T 2tps_A 176 VGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQ 221 (227)
T ss_dssp EEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred EEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHH
Confidence 9999999 999999999999999999999642 23 33444444443
No 125
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.01 E-value=5.1e-05 Score=91.67 Aligned_cols=148 Identities=12% Similarity=0.036 Sum_probs=94.4
Q ss_pred ceEEEEecCCCCCHHHHHHHHHHHHHHcc-c--CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCC
Q 012517 240 GILGVNIGKNKTSEDAAADYVQGVHTLSQ-Y--ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP 316 (462)
Q Consensus 240 ~~lgvnig~nk~t~~~~~dy~~~~~~l~~-~--aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 316 (462)
.+++||+... ++..+......++.+.+ . .|.+++....|.. +...++++.+ .+
T Consensus 645 ~~~gvN~~~~--~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~---------~~~~~~i~~l-------------G~ 700 (2051)
T 2uv8_G 645 STFGINLIYV--NPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSL---------EVASEYIETL-------------GL 700 (2051)
T ss_dssp CCEEEEEETT--CTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCH---------HHHHHHHHHS-------------CC
T ss_pred CceEEEEeec--ChhhhhhhHHHHHHHHHcCCCcceEEecCCCCch---------hhHHHHHHHc-------------CC
Confidence 3799998642 33322222244444432 2 4558887765531 1222222221 46
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEE-EEecCCccCCCCCCCCCcccccCCCCCC-cCccchHHHHHHHHHhcCCC
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGL-IISNTTISRPDPVSKNPVAKETGGLSGK-PLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgI-ivsNTt~~r~~~~~~~~~~~~~GGlSG~-~l~~~al~~v~~i~~~~~~~ 394 (462)
+++...... ......+..+.++|+|.+ ++.=+. .+.||.-|. .+....+.++.++++.+ +
T Consensus 701 ~vi~~~~~~---~~a~~~~~~~~~~g~d~~ii~~~~G-------------~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ 762 (2051)
T 2uv8_G 701 KYLGLKPGS---IDAISQVINIAKAHPNFPIALQWTG-------------GRGGGHHSFEDAHTPMLQMYSKIRRHP--N 762 (2051)
T ss_dssp SCEEECCCS---HHHHHHHHHHHHHSTTSCEEEEECC-------------SSCSEECCSCCSSHHHHHHHHHHTTCT--T
T ss_pred EEEEecCch---HHHHHHHHHHHHhCCCceeEEEEEc-------------cCcCCCCCcccccccHHHHHHHHHhcC--C
Confidence 776644432 134455667788999994 332111 156777664 34445567789999988 7
Q ss_pred ccEEEecCCCCHHHHHHHH-----------HhCCCEEEEchhhhhc
Q 012517 395 IPLIGCGGISSGEDAYRKI-----------RAGATLVQLYTAFAYG 429 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i-----------~aGAd~Vqv~Tali~~ 429 (462)
||||+.|||.+++++..+| ..||+.|||+|.|+..
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t 808 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIA 808 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTS
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhC
Confidence 9999999999999999999 8999999999999863
No 126
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.99 E-value=1.7e-05 Score=85.32 Aligned_cols=95 Identities=23% Similarity=0.138 Sum_probs=77.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH--
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-- 406 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-- 406 (462)
.+..++|+...+.|+|++++.|-+ |..+|++.++.+++.++++++.+ .+||+..|||.+.
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~----------------~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d 341 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNIT----------------SFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVD 341 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC-------------------CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCC----------------ccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchh
Confidence 378899999999999999998743 23345555666889999999988 7999999999998
Q ss_pred ---------HHHHHHHHhCCCEEEEchhhhhc------------CCChHHHHHHHH
Q 012517 407 ---------EDAYRKIRAGATLVQLYTAFAYG------------GPALIPQIKAEL 441 (462)
Q Consensus 407 ---------~dA~e~i~aGAd~Vqv~Tali~~------------GP~~i~~i~~~L 441 (462)
++|.+++++|||.|.|+|+.+.+ +|++++++.+..
T Consensus 342 ~~~~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 397 (555)
T 1jvn_A 342 VDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAY 397 (555)
T ss_dssp TTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHh
Confidence 55999999999999999999753 588998887754
No 127
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=97.98 E-value=8.2e-05 Score=76.16 Aligned_cols=135 Identities=9% Similarity=-0.031 Sum_probs=103.8
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|.+.++++.+ .+|.+.+++.++ +.+. .+++++|+++. +.+.+|+|+....++.++..+++
T Consensus 166 e~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~-~e~v~avr~a~-------g~d~~l~vDan~~~~~~~a~~~~ 228 (388)
T 2nql_A 166 KARGELAKYWQDRGFNAFKFATPVA---------DDGP-AAEIANLRQVL-------GPQAKIAADMHWNQTPERALELI 228 (388)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGC---------TTCH-HHHHHHHHHHH-------CTTSEEEEECCSCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCC---------ChHH-HHHHHHHHHHh-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 377777776654 589999998763 2355 78888888875 45789999998778888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.
T Consensus 229 ~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~ 280 (388)
T 2nql_A 229 AEMQPFDPWFAE---------A-----------------PVWTEDIAGLEKVSKNT--DVPIAVGEEWRTHWDMRARIER 280 (388)
T ss_dssp HHHGGGCCSCEE---------C-----------------CSCTTCHHHHHHHHTSC--CSCEEECTTCCSHHHHHHHHTT
T ss_pred HHHhhcCCCEEE---------C-----------------CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc
Confidence 999999988652 1 11122467788999988 7999999999999999999998
Q ss_pred C-CCEEEEchhhhhcCCChHHHHH
Q 012517 416 G-ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 416 G-Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
| +|+||+-... .|+.-..++.
T Consensus 281 ~~~d~v~ik~~~--GGit~~~~i~ 302 (388)
T 2nql_A 281 CRIAIVQPEMGH--KGITNFIRIG 302 (388)
T ss_dssp SCCSEECCCHHH--HCHHHHHHHH
T ss_pred CCCCEEEecCCC--CCHHHHHHHH
Confidence 7 9999997665 4554444443
No 128
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=97.98 E-value=0.00011 Score=74.20 Aligned_cols=145 Identities=11% Similarity=0.046 Sum_probs=107.1
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|.+.++++.+ .+|.+.+++.++ +.+...+++++|+++. +.+.||.++....++.++..+++
T Consensus 146 ~~~~~~a~~~~~~Gf~~iKik~g~~---------~~~~~~e~v~avr~a~-------g~~~~l~vDan~~~~~~~a~~~~ 209 (359)
T 1mdl_A 146 KLATERAVTAAELGFRAVKTRIGYP---------ALDQDLAVVRSIRQAV-------GDDFGIMVDYNQSLDVPAAIKRS 209 (359)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS---------SHHHHHHHHHHHHHHH-------CSSSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC---------CHHHHHHHHHHHHHHh-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 367777776654 589999998763 2245567888888775 35789999998888888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- .| +.+...+..+++++.+ ++||++.+.+.+.+++.+.++.
T Consensus 210 ~~l~~~~i~~iE-------~P-------------------~~~~~~~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~~ 261 (359)
T 1mdl_A 210 QALQQEGVTWIE-------EP-------------------TLQHDYEGHQRIQSKL--NVPVQMGENWLGPEEMFKALSI 261 (359)
T ss_dssp HHHHHHTCSCEE-------CC-------------------SCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred HHHHHhCCCeEE-------CC-------------------CChhhHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHc
Confidence 999999988652 10 1122467788999988 7999999999999999999998
Q ss_pred C-CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 416 G-ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 416 G-Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
| +|+||+-..-+ .|+.-..++ .++.+++|+
T Consensus 262 ~~~d~v~ik~~~~-GGi~~~~~i----~~~A~~~g~ 292 (359)
T 1mdl_A 262 GACRLAMPDAMKI-GGVTGWIRA----SALAQQFGI 292 (359)
T ss_dssp TCCSEECCBTTTT-THHHHHHHH----HHHHHHTTC
T ss_pred CCCCEEeecchhh-CCHHHHHHH----HHHHHHcCC
Confidence 7 99999976653 333333333 234445554
No 129
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.97 E-value=2.6e-05 Score=76.33 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
+...+......|..-|.+--+. ++...++|+++++.+++++||+..|||+|.+|+.
T Consensus 188 ~~aYa~~gad~G~~lV~LD~~~------------------------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~ 243 (286)
T 3vk5_A 188 IDRYLHVARAFGFHMVYLYSRN------------------------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVT 243 (286)
T ss_dssp HHHHHHHHHHTTCSEEEEECSS------------------------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCC------------------------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHH
Confidence 3567777778888877554211 2346789999999985469999999999999999
Q ss_pred HHHHhCCCEEEEchhhhhcC--CChHHHHHHH
Q 012517 411 RKIRAGATLVQLYTAFAYGG--PALIPQIKAE 440 (462)
Q Consensus 411 e~i~aGAd~Vqv~Tali~~G--P~~i~~i~~~ 440 (462)
+++++|||.|.++|+++. + |.+++++..+
T Consensus 244 ~ll~aGAD~VVVGSAav~-d~~Pelv~e~a~~ 274 (286)
T 3vk5_A 244 EYLDSGADYVGFAGALEQ-PDWRSALAEIAGR 274 (286)
T ss_dssp HHHHTTCSEEEESGGGSS-TTHHHHHHHHHC-
T ss_pred HHHHcCCCEEEECchhhc-CCCHHHHHHHHHh
Confidence 999999999999999964 5 5666665543
No 130
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.94 E-value=0.00017 Score=68.46 Aligned_cols=121 Identities=22% Similarity=0.271 Sum_probs=80.8
Q ss_pred cccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe---cCCCChhhHHHHHHHHHHc
Q 012517 267 SQYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI---APDLSKEDLEDIAAVAVAL 341 (462)
Q Consensus 267 ~~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi---spdl~~~~~~~ia~~~~~~ 341 (462)
...||.|.+ |++.- . ..+.+.+.+-+.+|++++. + + .+|+ +..++++++...++.+.++
T Consensus 82 ~~GAdevd~vinig~~-----~-~g~~~~v~~ei~~v~~a~~--------~-~-~lkvIlet~~l~~e~i~~a~~ia~ea 145 (220)
T 1ub3_A 82 ARGADEVDMVLHLGRA-----K-AGDLDYLEAEVRAVREAVP--------Q-A-VLKVILETGYFSPEEIARLAEAAIRG 145 (220)
T ss_dssp HTTCSEEEEECCHHHH-----H-TTCHHHHHHHHHHHHHHST--------T-S-EEEEECCGGGSCHHHHHHHHHHHHHH
T ss_pred HcCCCEEEecccchhh-----h-CCCHHHHHHHHHHHHHHHc--------C-C-CceEEEecCCCCHHHHHHHHHHHHHh
Confidence 345898776 54320 0 0123445555666666541 2 2 5663 2346778999999999999
Q ss_pred CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEE
Q 012517 342 RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQ 421 (462)
Q Consensus 342 GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vq 421 (462)
|+|.|-.+ |.+ ..|| .+.+-++.+++.++.++||-++|||.+.+|+++++++||+-+.
T Consensus 146 GADfVKTs-TGf-------------~~~g--------at~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG 203 (220)
T 1ub3_A 146 GADFLKTS-TGF-------------GPRG--------ASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLG 203 (220)
T ss_dssp TCSEEECC-CSS-------------SSCC--------CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCEEEeC-CCC-------------CCCC--------CCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccc
Confidence 99988633 211 0122 1456777788877778999999999999999999999999555
Q ss_pred Echh
Q 012517 422 LYTA 425 (462)
Q Consensus 422 v~Ta 425 (462)
..++
T Consensus 204 ~S~g 207 (220)
T 1ub3_A 204 TSSG 207 (220)
T ss_dssp ETTH
T ss_pred hhHH
Confidence 5443
No 131
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.93 E-value=4.2e-05 Score=71.90 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=47.2
Q ss_pred HHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHH
Q 012517 381 NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446 (462)
Q Consensus 381 l~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~ 446 (462)
.+.++.+++.++ ++|++++|||+ .+++.+++++||+.|.++|++.. .+ +.++.+..+++++
T Consensus 139 ~~~lk~l~~~~~-~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~--~d-~~~i~~~a~~~~~ 199 (207)
T 2yw3_A 139 VRVLRAYAEVFP-EVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ--GN-LEAVRAKVRAAKA 199 (207)
T ss_dssp HHHHHHHHHHCT-TCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS--SC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC-CCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC--CC-HHHHHHHHHHHHH
Confidence 356788888876 79999999997 79999999999999999999864 33 3344444444443
No 132
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.91 E-value=2.5e-05 Score=75.19 Aligned_cols=57 Identities=16% Similarity=0.081 Sum_probs=49.4
Q ss_pred cchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCC-hHHHH
Q 012517 378 SLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPA-LIPQI 437 (462)
Q Consensus 378 ~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~-~i~~i 437 (462)
+...++++++++.+. ++|++.-|||+|++++.++++ |||.|.++|+++. .|. +++++
T Consensus 167 ~~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~-~~~~~~~~v 224 (240)
T 1viz_A 167 LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE-DFDRALKTV 224 (240)
T ss_dssp CCCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH-CHHHHHTHH
T ss_pred cChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh-CHHHHHHHH
Confidence 346789999999874 599999999999999999888 9999999999975 677 77663
No 133
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.91 E-value=0.00029 Score=65.80 Aligned_cols=207 Identities=17% Similarity=0.200 Sum_probs=118.3
Q ss_pred CcEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCc
Q 012517 137 NPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216 (462)
Q Consensus 137 NPiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~ 216 (462)
.|..+|+=+....+.++.+.+.|.-++.+.-. .|.. ++ | + +.|. .+++.+++..
T Consensus 7 ~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~-----dg~~-~~-----------~-~---~~g~-~~i~~i~~~~---- 60 (220)
T 2fli_A 7 APSILAADYANFASELARIEETDAEYVHIDIM-----DGQF-VP-----------N-I---SFGA-DVVASMRKHS---- 60 (220)
T ss_dssp EEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEE-----BSSS-SS-----------C-B---CBCH-HHHHHHHTTC----
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCEEEEEee-----cCCC-CC-----------c-c---ccCH-HHHHHHHHhC----
Confidence 35666665666678888899999877665521 1210 00 0 0 1223 3344454321
Q ss_pred ccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHH
Q 012517 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKD 296 (462)
Q Consensus 217 ~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ 296 (462)
+.++.+-+.-| +++ +|++.+..++ +|++.++...+ +...+
T Consensus 61 ----------------------~~~~~v~l~v~--d~~---~~i~~~~~~g--ad~v~vh~~~~-----------~~~~~ 100 (220)
T 2fli_A 61 ----------------------KLVFDCHLMVV--DPE---RYVEAFAQAG--ADIMTIHTEST-----------RHIHG 100 (220)
T ss_dssp ----------------------CSEEEEEEESS--SGG---GGHHHHHHHT--CSEEEEEGGGC-----------SCHHH
T ss_pred ----------------------CCCEEEEEeec--CHH---HHHHHHHHcC--CCEEEEccCcc-----------ccHHH
Confidence 01444545433 332 4556666666 99999987543 12345
Q ss_pred HHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcC
Q 012517 297 LVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPL 376 (462)
Q Consensus 297 ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l 376 (462)
+++.+++. ..++++=+.|..+.+.+..+ ..++|.|.+-.+.. |+.|...
T Consensus 101 ~~~~~~~~----------g~~i~~~~~~~t~~e~~~~~-----~~~~d~vl~~~~~~----------------g~~g~~~ 149 (220)
T 2fli_A 101 ALQKIKAA----------GMKAGVVINPGTPATALEPL-----LDLVDQVLIMTVNP----------------GFGGQAF 149 (220)
T ss_dssp HHHHHHHT----------TSEEEEEECTTSCGGGGGGG-----TTTCSEEEEESSCT----------------TCSSCCC
T ss_pred HHHHHHHc----------CCcEEEEEcCCCCHHHHHHH-----HhhCCEEEEEEECC----------------CCccccc
Confidence 55555431 35677777665443333222 24589776432211 2223222
Q ss_pred ccchHHHHHHHHHhcC---CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHH
Q 012517 377 LSLSNNILKEMYLLTR---GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAE 443 (462)
Q Consensus 377 ~~~al~~v~~i~~~~~---~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~ 443 (462)
.+..++.++++++.++ .++||++.|||+ ++++.+.+++||+.|-++|++. ++++ +.+..+.+.+
T Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~-~~~d-~~~a~~~~~~ 216 (220)
T 2fli_A 150 IPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLF-KASD-LVSQVQTLRT 216 (220)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHH-TSSC-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHh-CCCC-HHHHHHHHHH
Confidence 2334566666666542 258999999999 8999999999999999999995 5566 3344444433
No 134
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.90 E-value=8.1e-05 Score=71.04 Aligned_cols=88 Identities=19% Similarity=0.115 Sum_probs=70.6
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHH
Q 012517 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGE 407 (462)
Q Consensus 328 ~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~ 407 (462)
.+++...|..++-.|.+.|-+-. ||.+ ...+.++++++.++ ++||+.-|||+|++
T Consensus 139 ~e~~~~~a~~a~~~g~~~VYld~---------------------sG~~---~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e 193 (228)
T 3vzx_A 139 MDDIVAYARVSELLQLPIFYLEY---------------------SGVL---GDIEAVKKTKAVLE-TSTLFYGGGIKDAE 193 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC---------------------TTSC---CCHHHHHHHHHHCS-SSEEEEESSCCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecC---------------------CCCc---CCHHHHHHHHHhcC-CCCEEEeCCCCCHH
Confidence 46788888888878887775432 2221 14788999999884 59999999999999
Q ss_pred HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 408 dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+|.+++ +|||.|.++|+++. +|.+++++.+.++
T Consensus 194 ~a~~~~-~gAD~VVVGSa~v~-~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 194 TAKQYA-EHADVIVVGNAVYE-DFDRALKTVAAVK 226 (228)
T ss_dssp HHHHHH-TTCSEEEECTHHHH-CHHHHHHHHHHHH
T ss_pred HHHHHH-hCCCEEEEChHHhc-CHHHHHHHHHHHh
Confidence 999988 79999999999975 7999988887664
No 135
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.90 E-value=2.8e-05 Score=73.96 Aligned_cols=89 Identities=17% Similarity=0.104 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+++.|+|.|.+..-.. ...+. ... +.++++++.+ ++|++..|||.+++++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~----------------~~~~~---~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~ 89 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDA----------------AFGRG---SNH-ELLAEVVGKL--DVQVELSGGIRDDESL 89 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHH----------------HTTSC---CCH-HHHHHHHHHC--SSEEEEESSCCSHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcc----------------cccCC---ChH-HHHHHHHHhc--CCcEEEECCCCCHHHH
Confidence 678899999999999999874210 00111 113 7889999988 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++|||.|.+++.++. .|.++.++.+.+
T Consensus 90 ~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 120 (244)
T 2y88_A 90 AAALATGCARVNVGTAALE-NPQWCARVIGEH 120 (244)
T ss_dssp HHHHHTTCSEEEECHHHHH-CHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECchHhh-ChHHHHHHHHHc
Confidence 9999999999999999975 587777776553
No 136
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.85 E-value=3.2e-05 Score=73.79 Aligned_cols=89 Identities=18% Similarity=0.140 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+++.|+|.|.+..-.. ...|. ... +.++++++.+ ++|++..|||.+++++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~----------------~~~~~---~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~ 90 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDA----------------AFGTG---DNR-ALIAEVAQAM--DIKVELSGGIRDDDTL 90 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHH----------------HHTSC---CCH-HHHHHHHHHC--SSEEEEESSCCSHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCch----------------hhcCC---ChH-HHHHHHHHhc--CCcEEEECCcCCHHHH
Confidence 678889999999999999874210 00111 123 7889999988 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+++++|||.|.+++..+. .|.++.++.+.+
T Consensus 91 ~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 121 (244)
T 1vzw_A 91 AAALATGCTRVNLGTAALE-TPEWVAKVIAEH 121 (244)
T ss_dssp HHHHHTTCSEEEECHHHHH-CHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECchHhh-CHHHHHHHHHHc
Confidence 9999999999999999875 687777776543
No 137
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.85 E-value=9.8e-05 Score=68.47 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
++.+.++.+...|+..|.++... + .|...|. ..+.++++++.. ++|||++||+.+++|+
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~--~------------~g~~~g~-----~~~~i~~~~~~~--~~Pvia~~g~~~~~~~ 189 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSID--R------------DGTKSGY-----DTEMIRFVRPLT--TLPIIASGGAGKMEHF 189 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETT--T------------TTCCSCC-----CHHHHHHHGGGC--CSCEEEESCCCSHHHH
T ss_pred CHHHHHHHHhhcCCCeEEEEecC--C------------CCccccc-----cHHHHHHHHHhc--CCCEEecCCCCCHHHH
Confidence 56788888888898877776421 1 1222222 367888998887 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.+.+++||+.|.+++++. .+|.-+.++++. |.+.|+
T Consensus 190 ~~~~~~G~~~~~vg~a~~-~~~~~~~~~~~~----l~~~~~ 225 (237)
T 3cwo_X 190 LEAFLAGADAALAASVFH-FREIDVRELKEY----LKKHGV 225 (237)
T ss_dssp HHHHHHTCSEEEESHHHH-TTSSCHHHHHHH----HHTTTC
T ss_pred HHHHHcCcHHHhhhHHHH-cCCCCHHHHHHH----HHHCCC
Confidence 999999999999999995 578888887764 445665
No 138
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.85 E-value=3.8e-05 Score=74.12 Aligned_cols=89 Identities=18% Similarity=0.239 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++++.+.+.|+|.|.+++... .|..+| ...+.++++++.+ ++||+..|||.+.+|+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~--------------~~~~~g-----~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i 89 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDR--------------DGTKSG-----YDTEMIRFVRPLT--TLPIIASGGAGKMEHF 89 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTT--------------SSCSSC-----CCHHHHHHHGGGC--CSCEEEESCCCSTHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEecCc--------------ccCCCc-----ccHHHHHHHHHhc--CCCEEEECCCCCHHHH
Confidence 678999999999999999965321 111122 2568889999888 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhc--CCChHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYG--GPALIPQIKA 439 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~--GP~~i~~i~~ 439 (462)
.+++++|||.|.++++++.. .|..++++.+
T Consensus 90 ~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 90 LEAFLAGADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp HHHHHHTCSEEECCCCC------CHHHHHHCC
T ss_pred HHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 99999999999999999644 5777776643
No 139
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=97.82 E-value=0.00018 Score=73.36 Aligned_cols=140 Identities=12% Similarity=0.051 Sum_probs=103.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .+|.+.+++.+ +.+...+++++|+++. +.+.||.|+....++.++..++++
T Consensus 148 ~~~~~a~~~~~~Gf~~iKik~g~----------~~~~~~e~v~avr~a~-------g~d~~l~vDan~~~~~~~a~~~~~ 210 (379)
T 2rdx_A 148 ETRAELARHRAAGYRQFQIKVGA----------DWQSDIDRIRACLPLL-------EPGEKAMADANQGWRVDNAIRLAR 210 (379)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS----------CHHHHHHHHHHHGGGS-------CTTCEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccC----------CHHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCHHHHHHHHH
Confidence 67777776654 59999999875 2345567777777653 357899999988788888899999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|+ .|- + |+. ..+..+++++.+ ++||++.+.+.+.+++.+.++.|
T Consensus 211 ~l~~~~i-~iE---------~-----------------P~~--~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~ 259 (379)
T 2rdx_A 211 ATRDLDY-ILE---------Q-----------------PCR--SYEECQQVRRVA--DQPMKLDECVTGLHMAQRIVADR 259 (379)
T ss_dssp HTTTSCC-EEE---------C-----------------CSS--SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHHT
T ss_pred HHHhCCe-EEe---------C-----------------CcC--CHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcC
Confidence 9999887 541 1 111 467788899988 79999999999999999999987
Q ss_pred -CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 417 -ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
+|+||+--..+ .|+.-..++. ++.+++|+
T Consensus 260 ~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~ 289 (379)
T 2rdx_A 260 GAEICCLKISNL-GGLSKARRTR----DFLIDNRM 289 (379)
T ss_dssp CCSEEEEETTTT-TSHHHHHHHH----HHHHHTTC
T ss_pred CCCEEEEecccc-CCHHHHHHHH----HHHHHcCC
Confidence 99999987764 4544344433 33444554
No 140
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=97.80 E-value=0.00028 Score=72.31 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=98.6
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|.+.++++.+ .+|.+.+++.-+ +.+...+++++|+++. +.+++|.|.....++.++..+++
T Consensus 164 e~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~~~e~v~avR~av-------g~d~~l~vDan~~~~~~~a~~~~ 227 (393)
T 2og9_A 164 DQLMVNASASIERGIGGIKLKVGQP---------DGALDIARVTAVRKHL-------GDAVPLMVDANQQWDRPTAQRMC 227 (393)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCS---------CHHHHHHHHHHHHHHH-------CTTSCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC---------CHHHHHHHHHHHHHHc-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 377777777654 589999987531 2355668888888775 45789999988778888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.
T Consensus 228 ~~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 279 (393)
T 2og9_A 228 RIFEPFNLVWIE---------E-----------------PLDAYDHEGHAALALQF--DTPIATGEMLTSAAEHGDLIRH 279 (393)
T ss_dssp HHHGGGCCSCEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred HHHHhhCCCEEE---------C-----------------CCCcccHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHC
Confidence 999999988652 1 11122467788899988 7999999999999999999998
Q ss_pred C-CCEEEEchhh
Q 012517 416 G-ATLVQLYTAF 426 (462)
Q Consensus 416 G-Ad~Vqv~Tal 426 (462)
| +|+||+--.-
T Consensus 280 ~~~d~v~ik~~~ 291 (393)
T 2og9_A 280 RAADYLMPDAPR 291 (393)
T ss_dssp TCCSEECCCHHH
T ss_pred CCCCEEeeCccc
Confidence 8 9999987655
No 141
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.79 E-value=0.00027 Score=67.55 Aligned_cols=210 Identities=13% Similarity=0.167 Sum_probs=130.2
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|=.||+=|..-++.++.+ +.|.-++.+.-. .|+--|. +. .|.. +.+.|++.-
T Consensus 5 pSila~D~~~l~~~i~~~-~~gad~lHvDvm-----DG~fvpn-------------~t---~G~~-~v~~lr~~~----- 56 (231)
T 3ctl_A 5 PSLMCMDLLKFKEQIEFI-DSHADYFHIDIM-----DGHFVPN-------------LT---LSPF-FVSQVKKLA----- 56 (231)
T ss_dssp EBGGGSCGGGHHHHHHHH-HTTCSCEEEEEE-----CSSSSSC-------------CC---BCHH-HHHHHHTTC-----
T ss_pred eehhhCChhhHHHHHHHH-HcCCCEEEEEEE-----eCccCcc-------------ch---hcHH-HHHHHHhcc-----
Confidence 334555566777888888 999887766522 2332121 11 2332 555565431
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDL 297 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~l 297 (462)
+.++-+-+.-+ +++ +|++.+..++ ||++.+..-+|. ..+.++
T Consensus 57 ---------------------~~~~dvhLmv~--dp~---~~i~~~~~aG--Ad~itvh~Ea~~----------~~~~~~ 98 (231)
T 3ctl_A 57 ---------------------TKPLDCHLMVT--RPQ---DYIAQLARAG--ADFITLHPETIN----------GQAFRL 98 (231)
T ss_dssp ---------------------CSCEEEEEESS--CGG---GTHHHHHHHT--CSEEEECGGGCT----------TTHHHH
T ss_pred ---------------------CCcEEEEEEec--CHH---HHHHHHHHcC--CCEEEECcccCC----------ccHHHH
Confidence 11466666543 454 6777666666 999999865421 124567
Q ss_pred HHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCc
Q 012517 298 VKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLL 377 (462)
Q Consensus 298 l~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~ 377 (462)
++.+++. ..-+.|=+.|..+.+.+.++.+ ++|.|.+- |. ..|+.|....
T Consensus 99 i~~i~~~----------G~k~gv~lnp~tp~~~~~~~l~-----~~D~Vlvm-sV---------------~pGfggQ~f~ 147 (231)
T 3ctl_A 99 IDEIRRH----------DMKVGLILNPETPVEAMKYYIH-----KADKITVM-TV---------------DPGFAGQPFI 147 (231)
T ss_dssp HHHHHHT----------TCEEEEEECTTCCGGGGTTTGG-----GCSEEEEE-SS---------------CTTCSSCCCC
T ss_pred HHHHHHc----------CCeEEEEEECCCcHHHHHHHHh-----cCCEEEEe-ee---------------ccCcCCcccc
Confidence 7777653 4566777788766555544432 68977553 11 1244455555
Q ss_pred cchHHHHHHHHHhcC---CCccEEEecCCCCHHHHHHHHHhCCCEEEEc-hhhhhcCCChHHHHHHHHHHHHH
Q 012517 378 SLSNNILKEMYLLTR---GKIPLIGCGGISSGEDAYRKIRAGATLVQLY-TAFAYGGPALIPQIKAELAECLE 446 (462)
Q Consensus 378 ~~al~~v~~i~~~~~---~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~-Tali~~GP~~i~~i~~~L~~~l~ 446 (462)
+..++.++++++..+ -+++|..-|||+ .+.+.+++++|||.+-++ |++. +.++.+.+..+.+++.++
T Consensus 148 ~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif-~~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 148 PEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLF-NHAENIDEAWRIMTAQIL 218 (231)
T ss_dssp TTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTG-GGCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHh-CCCCcHHHHHHHHHHHHH
Confidence 667888888888763 258999999998 788999999999999999 7774 444423344444444443
No 142
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.77 E-value=0.0015 Score=64.53 Aligned_cols=108 Identities=10% Similarity=0.083 Sum_probs=74.2
Q ss_pred CCCEEEEecCC-----CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHH
Q 012517 315 PPPLLVKIAPD-----LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL 389 (462)
Q Consensus 315 ~~Pv~vKispd-----l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~ 389 (462)
..|+++= ++. .+.+-+...++.+.+.|+|.|-+.-|. +.++++.+
T Consensus 171 GlpvIie-~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~-----------------------------e~~~~vv~ 220 (295)
T 3glc_A 171 GMPTMAV-TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE-----------------------------KGFERIVA 220 (295)
T ss_dssp TCCEEEE-ECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT-----------------------------TTHHHHHH
T ss_pred CCEEEEE-CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH-----------------------------HHHHHHHH
Confidence 5888873 332 233335668899999999988765210 01356666
Q ss_pred hcCCCccEEEecCCC-CHHHHH----HHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHHHhhc
Q 012517 390 LTRGKIPLIGCGGIS-SGEDAY----RKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSIIEAVG 458 (462)
Q Consensus 390 ~~~~~ipIIg~GGI~-s~~dA~----e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~e~~G 458 (462)
.+ .+||+..||+. +.+|++ +.+++||+.|-++|.+.+ .++ +.++.+.+.+...+ | .|++|+.-
T Consensus 221 ~~--~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q-~~d-p~~~~~al~~ivh~-~-~s~~eA~~ 288 (295)
T 3glc_A 221 GC--PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQ-SDH-PVAMMKAVQAVVHH-N-ETADRAYE 288 (295)
T ss_dssp TC--SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHT-SSS-HHHHHHHHHHHHHH-C-CCHHHHHH
T ss_pred hC--CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhc-CcC-HHHHHHHHHHHHhC-C-CCHHHHHH
Confidence 66 69999999998 454444 555899999999999965 354 67777777776654 3 57888753
No 143
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.77 E-value=0.00062 Score=65.16 Aligned_cols=117 Identities=20% Similarity=0.173 Sum_probs=78.6
Q ss_pred ccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEec---CCCChhhHHHHHHHHHHcC
Q 012517 268 QYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA---PDLSKEDLEDIAAVAVALR 342 (462)
Q Consensus 268 ~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis---pdl~~~~~~~ia~~~~~~G 342 (462)
..||.|.+ |++. +.+ .+.+-+.+|++++... ..|+ |+= ..++++++...++.+.++|
T Consensus 100 ~GAdEID~vinig~--------~~~--~v~~ei~~v~~a~~~~------g~~l--KvIlEt~~L~~e~i~~a~ria~eaG 161 (234)
T 1n7k_A 100 AGATELDVVPHLSL--------GPE--AVYREVSGIVKLAKSY------GAVV--KVILEAPLWDDKTLSLLVDSSRRAG 161 (234)
T ss_dssp HTCCEEEECCCGGG--------CHH--HHHHHHHHHHHHHHHT------TCEE--EEECCGGGSCHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeccchH--------HHH--HHHHHHHHHHHHHhhc------CCeE--EEEEeccCCCHHHHHHHHHHHHHhC
Confidence 35888776 5542 222 4555566666665321 2454 542 3367788999999999999
Q ss_pred CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHH--HHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 343 LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKE--MYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 343 vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~--i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
+|.|-.+ |.+. ..|| .+.+.++. +++.++ +||-++|||.+.+|+++++++||+-+
T Consensus 162 ADfVKTs-TG~~------------~~~g--------At~~dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i~aGa~Ri 218 (234)
T 1n7k_A 162 ADIVKTS-TGVY------------TKGG--------DPVTVFRLASLAKPLG--MGVKASGGIRSGIDAVLAVGAGADII 218 (234)
T ss_dssp CSEEESC-CSSS------------CCCC--------SHHHHHHHHHHHGGGT--CEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCEEEeC-CCCC------------CCCC--------CCHHHHHHHHHHHHHC--CCEEEecCCCCHHHHHHHHHcCcccc
Confidence 9988633 3110 0011 14456666 888885 99999999999999999999999955
Q ss_pred EEchh
Q 012517 421 QLYTA 425 (462)
Q Consensus 421 qv~Ta 425 (462)
...++
T Consensus 219 G~S~g 223 (234)
T 1n7k_A 219 GTSSA 223 (234)
T ss_dssp EETTH
T ss_pred chHHH
Confidence 54443
No 144
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=97.77 E-value=0.00071 Score=69.48 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=103.1
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCc-hHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC--ChhhHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGR-KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL--SKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl--~~~~~~~ 333 (462)
+|.+.++++.+ .+|.+.++. ||- |. +. +...+++++|+++. +.+++|+|+....+ +.++..+
T Consensus 148 ~~~~~a~~~~~~Gf~~iKik~-spv--G~----~~~~~~~e~v~avr~a~-------G~d~~l~vDan~~~~~~~~~a~~ 213 (401)
T 2hzg_A 148 ETLERARAARRDGFAAVKFGW-GPI--GR----GTVAADADQIMAAREGL-------GPDGDLMVDVGQIFGEDVEAAAA 213 (401)
T ss_dssp HHHHHHHHHHHTTCSEEEEES-TTT--TS----SCHHHHHHHHHHHHHHH-------CSSSEEEEECTTTTTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCeEEEcC-CCC--CC----CHHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCCCHHHHHH
Confidence 67777776654 589999997 553 21 23 55668888888775 35789999998888 8889999
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHH-hcCCCccEEEecCCCCHHHHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL-LTRGKIPLIGCGGISSGEDAYRK 412 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~-~~~~~ipIIg~GGI~s~~dA~e~ 412 (462)
+++.+.+.|++.|- ++ +.+...+..+++++ .+ ++||++.+.+.+.+++.+.
T Consensus 214 ~~~~l~~~~i~~iE---------qP-----------------~~~~d~~~~~~l~~~~~--~iPI~~dE~~~~~~~~~~~ 265 (401)
T 2hzg_A 214 RLPTLDAAGVLWLE---------EP-----------------FDAGALAAHAALAGRGA--RVRIAGGEAAHNFHMAQHL 265 (401)
T ss_dssp THHHHHHTTCSEEE---------CC-----------------SCTTCHHHHHHHHTTCC--SSEEEECTTCSSHHHHHHH
T ss_pred HHHHHHhcCCCEEE---------CC-----------------CCccCHHHHHHHHhhCC--CCCEEecCCcCCHHHHHHH
Confidence 99999999998762 10 11224677788888 77 7999999999999999999
Q ss_pred HHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 413 IRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 413 i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
++.| +|+||+-...+ .|+.-..++
T Consensus 266 i~~~~~d~v~ik~~~~-GGit~~~~i 290 (401)
T 2hzg_A 266 MDYGRIGFIQIDCGRI-GGLGPAKRV 290 (401)
T ss_dssp HHHSCCSEEEECHHHH-TSHHHHHHH
T ss_pred HHCCCCCEEEeCcchh-CCHHHHHHH
Confidence 9987 99999987764 454433333
No 145
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=97.77 E-value=0.00096 Score=68.36 Aligned_cols=147 Identities=12% Similarity=-0.002 Sum_probs=107.9
Q ss_pred eEEEEe-cCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 241 ILGVNI-GKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 241 ~lgvni-g~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
++..++ +- ..+++ ++.+.++++. ..++.+-+++.+ +.+.-.+++++|+++. +.+.+|
T Consensus 140 ~~y~~~~~~-~~~~e---~~~~~a~~~~~~G~~~iKiKvG~----------~~~~d~~~v~avR~a~-------g~d~~l 198 (389)
T 3ozy_A 140 RAYASSIYW-DLTPD---QAADELAGWVEQGFTAAKLKVGR----------APRKDAANLRAMRQRV-------GADVEI 198 (389)
T ss_dssp EEEEEEECS-SCCHH---HHHHHHHHHHHTTCSEEEEECCS----------CHHHHHHHHHHHHHHH-------CTTSEE
T ss_pred eeEEecCCC-CCCHH---HHHHHHHHHHHCCCCEEeeccCC----------CHHHHHHHHHHHHHHc-------CCCceE
Confidence 466666 41 12566 5666565554 359999999876 2344567788888775 457899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHH-HhcCCCccE
Q 012517 319 LVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY-LLTRGKIPL 397 (462)
Q Consensus 319 ~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~-~~~~~~ipI 397 (462)
+|+....++.++..++++.+.+.|++.|- . |+.+...+..++++ +.+ ++||
T Consensus 199 ~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~~--~iPI 250 (389)
T 3ozy_A 199 LVDANQSLGRHDALAMLRILDEAGCYWFE-------E-------------------PLSIDDIEGHRILRAQGT--PVRI 250 (389)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCSEEE-------S-------------------CSCTTCHHHHHHHHTTCC--SSEE
T ss_pred EEECCCCcCHHHHHHHHHHHHhcCCCEEE-------C-------------------CCCcccHHHHHHHHhcCC--CCCE
Confidence 99998888888999999999999998873 1 11122456778898 887 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 398 IGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 398 Ig~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
++.+.+.+.+|+.++++.| +|+||+--+.+ .|..-..+|
T Consensus 251 a~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i 290 (389)
T 3ozy_A 251 ATGENLYTRNAFNDYIRNDAIDVLQADASRA-GGITEALAI 290 (389)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCTTTS-SCHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHH
Confidence 9999999999999999987 99999987763 454433343
No 146
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.75 E-value=0.00067 Score=64.62 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=81.4
Q ss_pred HcccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe---cCCCChhhHHHHHHHHHH
Q 012517 266 LSQYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI---APDLSKEDLEDIAAVAVA 340 (462)
Q Consensus 266 l~~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi---spdl~~~~~~~ia~~~~~ 340 (462)
+...||-|.+ |++- + ...+.+.+.+-+.+|++++. + ..+|+ ...++++++...++.+.+
T Consensus 76 i~~GAdEID~Vinig~-----~-~~g~~~~v~~ei~~v~~a~~--------~--~~lKvIlEt~~Lt~eei~~a~~ia~e 139 (226)
T 1vcv_A 76 LAEVADEIDVVAPIGL-----V-KSRRWAEVRRDLISVVGAAG--------G--RVVKVITEEPYLRDEERYTLYDIIAE 139 (226)
T ss_dssp HTTTCSEEEEECCHHH-----H-HTTCHHHHHHHHHHHHHHTT--------T--SEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEecchhh-----h-cCCCHHHHHHHHHHHHHHHc--------C--CCceEEEeccCCCHHHHHHHHHHHHH
Confidence 5567898765 5430 0 01123556666666766641 2 25663 234677899999999999
Q ss_pred cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh---cCCCccEEEecCCCCHHHHHHHHHh--
Q 012517 341 LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL---TRGKIPLIGCGGISSGEDAYRKIRA-- 415 (462)
Q Consensus 341 ~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~---~~~~ipIIg~GGI~s~~dA~e~i~a-- 415 (462)
+|+|.|-.+ |.+...+ .. ..-|..|. .+.+.++.+++. ++++++|-++|||.+.+||++++++
T Consensus 140 aGADfVKTS-TGf~~~~------~~-~~~~~~~g----At~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~ 207 (226)
T 1vcv_A 140 AGAHFIKSS-TGFAEEA------YA-ARQGNPVH----STPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIG 207 (226)
T ss_dssp HTCSEEECC-CSCCCHH------HH-HHTTCCSS----CCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHC
T ss_pred cCCCEEEeC-CCCCccc------cc-cccCCCCC----CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 999998643 3221000 00 00011111 134555555555 7778999999999999999999999
Q ss_pred -CCC----EEEEchh
Q 012517 416 -GAT----LVQLYTA 425 (462)
Q Consensus 416 -GAd----~Vqv~Ta 425 (462)
||+ -+...++
T Consensus 208 ~Ga~~~~fRiGtS~~ 222 (226)
T 1vcv_A 208 WGEDPARVRLGTSTP 222 (226)
T ss_dssp SCSCTTTEEEEESCG
T ss_pred CCCCcCCceEecCch
Confidence 999 5554443
No 147
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=97.75 E-value=0.00051 Score=70.32 Aligned_cols=135 Identities=14% Similarity=0.080 Sum_probs=102.1
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .+|.+.+++... ..+...+++++|+++. +.++||+|+....++.++..++++
T Consensus 152 ~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~~~e~v~avR~a~-------G~d~~l~vDan~~~~~~~a~~~~~ 215 (391)
T 2qgy_A 152 DYLRQIEKFYGKKYGGIKIYPMLD---------SLSISIQFVEKVREIV-------GDELPLMLDLAVPEDLDQTKSFLK 215 (391)
T ss_dssp HHHHHHHHHHHTTCSCEEECCCCS---------SHHHHHHHHHHHHHHH-------CSSSCEEEECCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEccCCC---------hHHHHHHHHHHHHHHh-------CCCCEEEEEcCCCCCHHHHHHHHH
Confidence 77777776654 589999986521 1355678888888765 457999999988888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.|
T Consensus 216 ~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 267 (391)
T 2qgy_A 216 EVSSFNPYWIE---------E-----------------PVDGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISRN 267 (391)
T ss_dssp HHGGGCCSEEE---------C-----------------SSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTT
T ss_pred HHHhcCCCeEe---------C-----------------CCChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHcC
Confidence 99999998752 1 11123467788899988 79999999999999999999988
Q ss_pred -CCEEEEchhhhhcCCChHHHH
Q 012517 417 -ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+|+||+--..+ .|+.-..++
T Consensus 268 ~~d~v~ik~~~~-GGit~~~~i 288 (391)
T 2qgy_A 268 AADIFNPDISGM-GGLIDIIEI 288 (391)
T ss_dssp CCSEECCBTTTS-SCHHHHHHH
T ss_pred CCCEEEECcchh-CCHHHHHHH
Confidence 89999976653 354333333
No 148
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.71 E-value=0.0011 Score=63.22 Aligned_cols=208 Identities=14% Similarity=0.191 Sum_probs=128.5
Q ss_pred cEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcc
Q 012517 138 PLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKL 217 (462)
Q Consensus 138 PiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~ 217 (462)
|=.||+=|..-++.++.+.+.|..++-+--. .|+--|.+ . .|. .+.+.+++...
T Consensus 10 pSila~D~~~l~~~i~~~~~~g~d~iHvDvm-----Dg~fvpn~-----------t-----~G~-~~v~~lr~~~p---- 63 (227)
T 1tqx_A 10 PSVLASNISKLAEETQRMESLGAEWIHLDVM-----DMHFVPNL-----------S-----FGP-PVINNLKKYTK---- 63 (227)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE-----BSSSSSCB-----------C-----CCH-HHHHHHGGGCS----
T ss_pred eehhcCChhhHHHHHHHHHHcCCCEEEEEEE-----eCCcCcch-----------h-----cCH-HHHHHHHHhCC----
Confidence 3345555667788999998989877533221 12211111 1 223 35555654321
Q ss_pred cccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHH
Q 012517 218 DETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDL 297 (462)
Q Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~l 297 (462)
+.++.+.+.-+ .++ .|. +.+.. ||++.++.-+.. +.+.+.
T Consensus 64 ---------------------~~~~dvhLmv~--dp~---~~i---~~~~~-Ad~itvH~ea~~----------~~~~~~ 103 (227)
T 1tqx_A 64 ---------------------SIFFDVHLMVE--YPE---KYV---PLLKT-SNQLTFHFEALN----------EDTERC 103 (227)
T ss_dssp ---------------------SCEEEEEEESS--CGG---GGG---GGCTT-SSEEEEEGGGGT----------TCHHHH
T ss_pred ---------------------CCcEEEEEEEc--CHH---HHH---HHHHh-CCEEEEeecCCc----------cCHHHH
Confidence 12577777654 344 443 33334 999999975432 124456
Q ss_pred HH---HHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcC-CcEEEEecCCccCCCCCCCCCcccccCCCCC
Q 012517 298 VK---KVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALR-LDGLIISNTTISRPDPVSKNPVAKETGGLSG 373 (462)
Q Consensus 298 l~---aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~G-vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG 373 (462)
++ .+++ ...-+.|=+.|..+.+.+ +.+.+.| +|.|.+-.-. =|++|
T Consensus 104 i~~~~~i~~----------~G~k~gvalnp~tp~~~~----~~~l~~g~~D~VlvmsV~----------------pGf~g 153 (227)
T 1tqx_A 104 IQLAKEIRD----------NNLWCGISIKPKTDVQKL----VPILDTNLINTVLVMTVE----------------PGFGG 153 (227)
T ss_dssp HHHHHHHHT----------TTCEEEEEECTTSCGGGG----HHHHTTTCCSEEEEESSC----------------TTCSS
T ss_pred HHHHHHHHH----------cCCeEEEEeCCCCcHHHH----HHHhhcCCcCEEEEeeec----------------cCCCC
Confidence 66 5543 245677777776554443 3445555 9988653211 13445
Q ss_pred CcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHH
Q 012517 374 KPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECL 445 (462)
Q Consensus 374 ~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l 445 (462)
....+..++.++++++..+ +++|...|||+ .+.+.+.+++|||.+-++|++. +.++ +.+..+.+++.+
T Consensus 154 q~f~~~~l~ki~~lr~~~~-~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf-~~~d-~~~~i~~l~~~~ 221 (227)
T 1tqx_A 154 QSFMHDMMGKVSFLRKKYK-NLNIQVDGGLN-IETTEISASHGANIIVAGTSIF-NAED-PKYVIDTMRVSV 221 (227)
T ss_dssp CCCCGGGHHHHHHHHHHCT-TCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHH-TCSS-HHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcc-CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHh-CCCC-HHHHHHHHHHHH
Confidence 5556778899999999886 79999999998 8999999999999999999985 4455 333444444433
No 149
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.70 E-value=0.00038 Score=72.78 Aligned_cols=140 Identities=19% Similarity=0.140 Sum_probs=99.5
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.||++-++.++ + +.+.+.++++..++. ..-++|=+.. .++ ++.+.+.|+|-|-+
T Consensus 130 GAD~ILLi~a~-----l----~~~~l~~l~~~a~~l----------gm~~LvEvh~------~eE-~~~A~~lga~iIGi 183 (452)
T 1pii_A 130 QADACLLMLSV-----L----DDDQYRQLAAVAHSL----------EMGVLTEVSN------EEE-QERAIALGAKVVGI 183 (452)
T ss_dssp TCSEEEEETTT-----C----CHHHHHHHHHHHHHT----------TCEEEEEECS------HHH-HHHHHHTTCSEEEE
T ss_pred CCCEEEEEccc-----C----CHHHHHHHHHHHHHc----------CCeEEEEeCC------HHH-HHHHHHCCCCEEEE
Confidence 39999999875 1 125577777766542 5778887752 223 45677789998777
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
.|..+.. +...++...++.+.++.++++|+-|||.|++|+.++.++ |+.|-|+++++.
T Consensus 184 nnr~L~t---------------------~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 184 NNRDLRD---------------------LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp ESEETTT---------------------TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT
T ss_pred eCCCCCC---------------------CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 7753210 123466777888888778999999999999999999999 999999999985
Q ss_pred cCCChHHHHHHHHHHHHHHcCCCCHHHhh
Q 012517 429 GGPALIPQIKAELAECLERDGFKSIIEAV 457 (462)
Q Consensus 429 ~GP~~i~~i~~~L~~~l~~~G~~si~e~~ 457 (462)
-++.-..+++-+....+-.|.++.+|+.
T Consensus 242 -~~d~~~~~~~l~~~~~KICGit~~eda~ 269 (452)
T 1pii_A 242 -HDDLHAAVRRVLLGENKVCGLTRGQDAK 269 (452)
T ss_dssp -CSCHHHHHHHHHHCSCEECCCCSHHHHH
T ss_pred -CcCHHHHHHHHHHHhccccCCCcHHHHH
Confidence 3554444443333334556888888875
No 150
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.69 E-value=0.00028 Score=68.30 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=78.3
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.||++.+.... +. +.+.++++..++. ..-++|-+. +++ ++ +.+.+.|+|.|-+
T Consensus 128 GAD~VlL~~~~--------l~--~~l~~l~~~a~~l----------Gl~~lvev~---~~~---E~-~~a~~~gad~IGv 180 (254)
T 1vc4_A 128 GASAALLIVAL--------LG--ELTGAYLEEARRL----------GLEALVEVH---TER---EL-EIALEAGAEVLGI 180 (254)
T ss_dssp TCSEEEEEHHH--------HG--GGHHHHHHHHHHH----------TCEEEEEEC---SHH---HH-HHHHHHTCSEEEE
T ss_pred CCCEEEECccc--------hH--HHHHHHHHHHHHC----------CCeEEEEEC---CHH---HH-HHHHHcCCCEEEE
Confidence 39999997642 33 5567777655432 344444443 222 32 4667789998877
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC---CccEEEecCCCCHHHHHHHHHhCCCEEEEchh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG---KIPLIGCGGISSGEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~---~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Ta 425 (462)
.|.... . ....++...++.+.++. ++|+|+.|||.|++|+.+++. ||+.|.|+++
T Consensus 181 n~~~l~-~--------------------~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsA 238 (254)
T 1vc4_A 181 NNRDLA-T--------------------LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTS 238 (254)
T ss_dssp ESBCTT-T--------------------CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHH
T ss_pred ccccCc-C--------------------CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHH
Confidence 764321 0 01123444555555543 689999999999999999999 9999999999
Q ss_pred hhhcCCChHHHH
Q 012517 426 FAYGGPALIPQI 437 (462)
Q Consensus 426 li~~GP~~i~~i 437 (462)
++ ++++.-..+
T Consensus 239 l~-~~~d~~~~~ 249 (254)
T 1vc4_A 239 LM-RAPDLEAAL 249 (254)
T ss_dssp HH-TSSCHHHHH
T ss_pred Hc-CCCCHHHHH
Confidence 96 467654443
No 151
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=97.69 E-value=0.001 Score=67.45 Aligned_cols=135 Identities=10% Similarity=0.091 Sum_probs=101.4
Q ss_pred HHHHHHHHHc--ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLS--QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~--~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++++.++++. ..++.+.+++.+++ .+...+++++|+++. +.+.+|.++....++.++..+++
T Consensus 145 ~~~~~a~~~~~~~Gf~~iKik~g~~~---------~~~~~e~v~avr~a~-------g~~~~l~vDan~~~~~~~a~~~~ 208 (370)
T 1nu5_A 145 RDIDSALEMIETRRHNRFKVKLGART---------PAQDLEHIRSIVKAV-------GDRASVRVDVNQGWDEQTASIWI 208 (370)
T ss_dssp HHHHHHHHHHHTTSCSEEEEECSSSC---------HHHHHHHHHHHHHHH-------GGGCEEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCccEEEEecCCCC---------hHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 6666666654 35899999997642 234567788888765 23688999988778888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.++.
T Consensus 209 ~~l~~~~i~~iE---------q-----------------P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~ 260 (370)
T 1nu5_A 209 PRLEEAGVELVE---------Q-----------------PVPRANFGALRRLTEQN--GVAILADESLSSLSSAFELARD 260 (370)
T ss_dssp HHHHHHTCCEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHT
T ss_pred HHHHhcCcceEe---------C-----------------CCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHh
Confidence 999999988652 1 11123467788899988 7999999999999999999998
Q ss_pred C-CCEEEEchhhhhcCCChHHHH
Q 012517 416 G-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 416 G-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
| +|+||+--.-+ .|..-..++
T Consensus 261 ~~~d~v~ik~~~~-GGit~~~~i 282 (370)
T 1nu5_A 261 HAVDAFSLKLCNM-GGIANTLKV 282 (370)
T ss_dssp TCCSEEEECHHHH-TSHHHHHHH
T ss_pred CCCCEEEEchhhc-CCHHHHHHH
Confidence 7 99999977664 454434443
No 152
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.69 E-value=0.00018 Score=66.73 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=57.1
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
..+.+.|+|.|.+.+...... ..| ..+..++.++++++.+ ++||++.|||+ ++++.+++++
T Consensus 122 ~~~~~~g~d~i~~~~~~~~~~----------~~~------~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~ 182 (215)
T 1xi3_A 122 LEAEKKGADYLGAGSVFPTKT----------KED------ARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKT 182 (215)
T ss_dssp HHHHHHTCSEEEEECSSCC--------------C------CCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTT
T ss_pred HHHHhcCCCEEEEcCCccCCC----------CCC------CCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHc
Confidence 346678999998865321000 011 1234577888888887 79999999999 9999999999
Q ss_pred CCCEEEEchhhhhcCCC
Q 012517 416 GATLVQLYTAFAYGGPA 432 (462)
Q Consensus 416 GAd~Vqv~Tali~~GP~ 432 (462)
||+.|.++|++.. .++
T Consensus 183 Ga~gv~vgs~i~~-~~d 198 (215)
T 1xi3_A 183 GVDGIAVISAVMG-AED 198 (215)
T ss_dssp TCSEEEESHHHHT-SSS
T ss_pred CCCEEEEhHHHhC-CCC
Confidence 9999999999964 455
No 153
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.69 E-value=0.00075 Score=64.83 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
++.++++.+.+.|+..|++++- +|. |-++|+ .+++++++++.++ ++|||++|||.+.+|.
T Consensus 152 ~~~~~~~~~~~~g~~eil~t~I--d~D------------Gt~~G~-----d~~l~~~l~~~~~-~ipviasGGv~~~~Dl 211 (243)
T 4gj1_A 152 KLMEVLDFYSNKGLKHILCTDI--SKD------------GTMQGV-----NVRLYKLIHEIFP-NICIQASGGVASLKDL 211 (243)
T ss_dssp BHHHHHHHHHTTTCCEEEEEET--TC-----------------CC-----CHHHHHHHHHHCT-TSEEEEESCCCSHHHH
T ss_pred hHHHHHHHHhhcCCcEEEeeee--ccc------------ccccCC-----CHHHHHHHHHhcC-CCCEEEEcCCCCHHHH
Confidence 5788999999999999998754 232 334454 5688899998874 6999999999999998
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+ ++.+++.|-++++| |+|---++++++-|
T Consensus 212 ~~-l~~~~~gvivg~Al-~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 212 EN-LKGICSGVIVGKAL-LDGVFSVEEGIRCL 241 (243)
T ss_dssp HH-TTTTCSEEEECHHH-HTTSSCHHHHHHHH
T ss_pred HH-HHccCchhehHHHH-HCCCCCHHHHHHHh
Confidence 76 57889999999999 55765566655433
No 154
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.67 E-value=0.00096 Score=61.68 Aligned_cols=127 Identities=17% Similarity=0.075 Sum_probs=76.0
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
.|++.+..++ +|++.++.... .+.+.++++.+++. ..++.+=+. ..+ ...+.++.
T Consensus 68 ~~~~~a~~~G--ad~v~vh~~~~----------~~~~~~~~~~~~~~----------g~~~gv~~~-s~~--~p~~~~~~ 122 (207)
T 3ajx_A 68 LEADIAFKAG--ADLVTVLGSAD----------DSTIAGAVKAAQAH----------NKGVVVDLI-GIE--DKATRAQE 122 (207)
T ss_dssp HHHHHHHHTT--CSEEEEETTSC----------HHHHHHHHHHHHHH----------TCEEEEECT-TCS--SHHHHHHH
T ss_pred HHHHHHHhCC--CCEEEEeccCC----------hHHHHHHHHHHHHc----------CCceEEEEe-cCC--ChHHHHHH
Confidence 5666665555 99999886431 13344444444432 345555442 121 22234455
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCC
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGA 417 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGA 417 (462)
+.+.|+|.|-+.-+... ..+|. . +.. +.++++++. ++||+..|||+ ++++.+.+++||
T Consensus 123 ~~~~g~d~v~~~~~~~~------------~~~g~---~--~~~-~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGa 180 (207)
T 3ajx_A 123 VRALGAKFVEMHAGLDE------------QAKPG---F--DLN-GLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGA 180 (207)
T ss_dssp HHHTTCSEEEEECCHHH------------HTSTT---C--CTH-HHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTC
T ss_pred HHHhCCCEEEEEecccc------------cccCC---C--chH-HHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCC
Confidence 56779998844322100 01121 1 122 555555553 58999999998 889999999999
Q ss_pred CEEEEchhhhhcCCC
Q 012517 418 TLVQLYTAFAYGGPA 432 (462)
Q Consensus 418 d~Vqv~Tali~~GP~ 432 (462)
|.|-++|++.. .++
T Consensus 181 d~vvvGsaI~~-~~d 194 (207)
T 3ajx_A 181 EVAVAGGAIYG-AAD 194 (207)
T ss_dssp SEEEESHHHHT-SSS
T ss_pred CEEEEeeeccC-CCC
Confidence 99999999964 444
No 155
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.67 E-value=0.00092 Score=62.38 Aligned_cols=133 Identities=17% Similarity=0.155 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC--C--hhhH
Q 012517 256 AADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL--S--KEDL 331 (462)
Q Consensus 256 ~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl--~--~~~~ 331 (462)
.+.|++.+.+++ +|++.++.... .+.++.+++. . .++++..++... + .+.+
T Consensus 67 ~~~~v~~~~~~G--ad~vtvh~~~g--------------~~~i~~~~~~--------~-gv~vl~~t~~~~~~~~~~~~v 121 (208)
T 2czd_A 67 NRLIARKVFGAG--ADYVIVHTFVG--------------RDSVMAVKEL--------G-EIIMVVEMSHPGALEFINPLT 121 (208)
T ss_dssp HHHHHHHHHHTT--CSEEEEESTTC--------------HHHHHHHHTT--------S-EEEEECCCCSGGGGTTTGGGH
T ss_pred HHHHHHHHHhcC--CCEEEEeccCC--------------HHHHHHHHHh--------C-CcEEEEecCCcchhhHHHHHH
Confidence 346776666655 99999997542 1234444432 1 233333332110 0 2346
Q ss_pred HHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC-HHHHH
Q 012517 332 EDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS-GEDAY 410 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s-~~dA~ 410 (462)
..++....+.|++|++++.+. .+.++++++..+.+ ++|..|||.. +.++.
T Consensus 122 ~~~~~~a~~~G~~G~~~~~~~----------------------------~~~i~~lr~~~~~~-~~iv~gGI~~~g~~~~ 172 (208)
T 2czd_A 122 DRFIEVANEIEPFGVIAPGTR----------------------------PERIGYIRDRLKEG-IKILAPGIGAQGGKAK 172 (208)
T ss_dssp HHHHHHHHHHCCSEEECCCSS----------------------------THHHHHHHHHSCTT-CEEEECCCCSSTTHHH
T ss_pred HHHHHHHHHhCCcEEEECCCC----------------------------hHHHHHHHHhCCCC-eEEEECCCCCCCCCHH
Confidence 677888899999999776542 23456777777533 4679999985 44899
Q ss_pred HHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHH
Q 012517 411 RKIRAGATLVQLYTAFAYGGPALIPQIKAELAEC 444 (462)
Q Consensus 411 e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~ 444 (462)
+.+++||+.+-++|++.. .++ +.+..+.+++.
T Consensus 173 ~~~~aGad~vvvGr~I~~-a~d-p~~~~~~l~~~ 204 (208)
T 2czd_A 173 DAVKAGADYIIVGRAIYN-APN-PREAAKAIYDE 204 (208)
T ss_dssp HHHHHTCSEEEECHHHHT-SSS-HHHHHHHHHHH
T ss_pred HHHHcCCCEEEEChHHhc-CCC-HHHHHHHHHHH
Confidence 999999999999999865 455 34444444443
No 156
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=97.65 E-value=0.00098 Score=67.52 Aligned_cols=143 Identities=14% Similarity=0.146 Sum_probs=104.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHH-HHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLE-DIA 335 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~-~ia 335 (462)
++.+.++++.+ .++.+.+++.. +.+...+++++|+++. +.+.+|.++....++.++.. +++
T Consensus 144 ~~~~~a~~~~~~Gf~~iKik~g~----------~~~~~~e~v~avr~a~-------g~~~~l~vDan~~~~~~~a~~~~~ 206 (369)
T 2p8b_A 144 NMAEEAASMIQKGYQSFKMKVGT----------NVKEDVKRIEAVRERV-------GNDIAIRVDVNQGWKNSANTLTAL 206 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS----------CHHHHHHHHHHHHHHH-------CTTSEEEEECTTTTBSHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCEEEEEeCC----------CHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 66666666544 58999999863 2355667888888775 35789999987777777888 899
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.
T Consensus 207 ~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~ 258 (369)
T 2p8b_A 207 RSLGHLNIDWIE---------Q-----------------PVIADDIDAMAHIRSKT--DLPLMIDEGLKSSREMRQIIKL 258 (369)
T ss_dssp HTSTTSCCSCEE---------C-----------------CBCTTCHHHHHHHHHTC--CSCEEESTTCCSHHHHHHHHHH
T ss_pred HHHHhCCCcEEE---------C-----------------CCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHh
Confidence 988888887542 1 11122467788899988 7999999999999999999998
Q ss_pred C-CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 416 G-ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 416 G-Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
| +|+||+--.-+ .|..-..++. ++.+++|+
T Consensus 259 ~~~d~v~ik~~~~-GGit~~~~i~----~~A~~~g~ 289 (369)
T 2p8b_A 259 EAADKVNIKLMKC-GGIYPAVKLA----HQAEMAGI 289 (369)
T ss_dssp TCCSEEEECHHHH-TSHHHHHHHH----HHHHHTTC
T ss_pred CCCCEEEeecchh-CCHHHHHHHH----HHHHHcCC
Confidence 7 99999987764 4544344433 33445554
No 157
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=97.63 E-value=0.00075 Score=70.23 Aligned_cols=135 Identities=12% Similarity=0.086 Sum_probs=101.3
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCC--Cccc-ccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTP--GLRM-LQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~--glr~-lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ 333 (462)
++++.++++. ..++.+-+++.+|... |... .++.+...+++++|+++. +.+.+|+|.....++.++..+
T Consensus 149 ~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~av-------G~d~~L~vDan~~~t~~~A~~ 221 (433)
T 3rcy_A 149 MAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAV-------GDKADLLFGTHGQFTTAGAIR 221 (433)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCCSCBCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHh-------CCCCeEEEeCCCCCCHHHHHH
Confidence 6666666553 4699999999988542 2111 112344566777777765 457899999888888889999
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+++.+++.|++.|- + |+.+...+..+++++.+ .+||++.+.+.+.+|+.+.+
T Consensus 222 ~~~~Le~~~i~~iE---------e-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l 273 (433)
T 3rcy_A 222 LGQAIEPYSPLWYE---------E-----------------PVPPDNVGAMAQVARAV--RIPVATGERLTTKAEFAPVL 273 (433)
T ss_dssp HHHHHGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHHHS--SSCEEECTTCCSHHHHHHHH
T ss_pred HHHHhhhcCCCEEE---------C-----------------CCChhhHHHHHHHHhcc--CCCEEecCCCCCHHHHHHHH
Confidence 99999999988763 1 11222467788999998 79999999999999999999
Q ss_pred HhC-CCEEEEchhhh
Q 012517 414 RAG-ATLVQLYTAFA 427 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tali 427 (462)
+.| +|+||+--+-.
T Consensus 274 ~~g~~D~v~~d~~~~ 288 (433)
T 3rcy_A 274 REGAAAILQPALGRA 288 (433)
T ss_dssp HTTCCSEECCCHHHH
T ss_pred HcCCCCEEEeCchhc
Confidence 987 89999876653
No 158
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=97.63 E-value=0.00082 Score=68.89 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=96.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .++.+.+++.. +.+...+++++|+++. +.+.+|.++....++.++..++++
T Consensus 148 ~~~~~a~~~~~~Gf~~vKik~g~----------~~~~~~e~v~avR~a~-------g~d~~l~vDan~~~~~~~a~~~~~ 210 (397)
T 2qde_A 148 AVAEEALAVLREGFHFVKLKAGG----------PLKADIAMVAEVRRAV-------GDDVDLFIDINGAWTYDQALTTIR 210 (397)
T ss_dssp HHHHHHHHHHHHTCSCEEEECCS----------CHHHHHHHHHHHHHHH-------CTTSCEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhheeecccC----------CHHHHHHHHHHHHHhh-------CCCCEEEEECCCCCCHHHHHHHHH
Confidence 67766666543 58999999862 2245567788888775 357899999887788888899999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- . |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.|
T Consensus 211 ~l~~~~i~~iE-------q-------------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 262 (397)
T 2qde_A 211 ALEKYNLSKIE-------Q-------------------PLPAWDLDGMARLRGKV--ATPIYADESAQELHDLLAIINKG 262 (397)
T ss_dssp HHGGGCCSCEE-------C-------------------CSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHHT
T ss_pred HHHhCCCCEEE-------C-------------------CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcC
Confidence 99999988652 1 11122467778899888 79999999999999999999987
Q ss_pred -CCEEEEchhhh
Q 012517 417 -ATLVQLYTAFA 427 (462)
Q Consensus 417 -Ad~Vqv~Tali 427 (462)
+|+||+=-.-+
T Consensus 263 ~~d~v~ik~~~~ 274 (397)
T 2qde_A 263 AADGLMIKTQKA 274 (397)
T ss_dssp CCSEEEECHHHH
T ss_pred CCCEEEEecccc
Confidence 99999976553
No 159
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.62 E-value=0.00017 Score=69.41 Aligned_cols=94 Identities=17% Similarity=0.148 Sum_probs=63.7
Q ss_pred HHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 335 AAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 335 a~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
+..+.+.|+|.|.+++...... .. +. .+..++.++++++..+.++|+++.||| +++++.+.++
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~t----------K~-~~-----~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~ 210 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPT----------KP-GR-----AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLD 210 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC---------------------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHH
T ss_pred HHHHhhCCCCEEEEcCccCCCC----------CC-Cc-----chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHH
Confidence 4556678999999876421110 00 00 123467788888763237999999999 8999999999
Q ss_pred hCCCEEEEchhhhhcCCChHHHHHHHHHHHHHH
Q 012517 415 AGATLVQLYTAFAYGGPALIPQIKAELAECLER 447 (462)
Q Consensus 415 aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~ 447 (462)
+||+.|.++++++. -++ +....+++.+.+++
T Consensus 211 aGa~gvav~sai~~-a~d-p~~a~~~l~~~~~~ 241 (243)
T 3o63_A 211 AGARRIVVVRAITS-ADD-PRAAAEQLRSALTA 241 (243)
T ss_dssp TTCCCEEESHHHHT-CSS-HHHHHHHHHHHHHT
T ss_pred cCCCEEEEeHHHhC-CCC-HHHHHHHHHHHHHh
Confidence 99999999999964 455 44455555555543
No 160
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.62 E-value=0.0034 Score=64.42 Aligned_cols=145 Identities=12% Similarity=-0.001 Sum_probs=106.2
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHH-HHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGV-HTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPP 317 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~-~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~P 317 (462)
++..+++. ...+++ ++++.+ +++. ..+..+-+.+.++... ...+.+.-.+.+++|+++. +.+.+
T Consensus 127 ~~y~s~~g~~~~~~e---~~~~~a~~~~~~~G~~~~KlKvG~~~~~---~~~~~~~d~~~v~avR~a~-------g~~~~ 193 (393)
T 4dwd_A 127 PCYSSIGGNAARSVD---EVVREVARRVEAEQPAAVKIRWDGDRTR---CDVDIPGDIAKARAVRELL-------GPDAV 193 (393)
T ss_dssp EEEEEECCCSSSCHH---HHHHHHHHHHHHHCCSEEEEECCCCTTC---CSCCHHHHHHHHHHHHHHH-------CTTCC
T ss_pred eeEEecCccCCCCHH---HHHHHHHHHHHHcCCCEEEEccCCCCcc---cccCHHHHHHHHHHHHHHh-------CCCCe
Confidence 46667632 112555 555555 4433 3689999999876432 2234455567777887765 45789
Q ss_pred EEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccE
Q 012517 318 LLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPL 397 (462)
Q Consensus 318 v~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI 397 (462)
|+|.....++.++..++++.+.+.|++.|- + |+.+-..+..+++++.+ .+||
T Consensus 194 l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPI 245 (393)
T 4dwd_A 194 IGFDANNGYSVGGAIRVGRALEDLGYSWFE---------E-----------------PVQHYHVGAMGEVAQRL--DITV 245 (393)
T ss_dssp EEEECTTCCCHHHHHHHHHHHHHTTCSEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCE
Confidence 999998888888999999999999988763 1 11222457778899988 7999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 398 IGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 398 Ig~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
++...+.+.+|+.++++.|+|+||+--+.
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~~~ 274 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDIVK 274 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCTTT
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCccc
Confidence 99999999999999999889999987665
No 161
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.61 E-value=0.00014 Score=68.48 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=75.6
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE-ecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK-IAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK-ispdl~~~~~~~ia~ 336 (462)
.|++.+..++ +|++.+...++ .+.+.++++.+++. ..+..+. +.| .+.+++ .
T Consensus 74 ~~~~~~~~aG--ad~i~vh~~~~----------~~~~~~~~~~~~~~----------g~~~~~d~l~~-~T~~~~----~ 126 (218)
T 3jr2_A 74 ILSRMAFEAG--ADWITVSAAAH----------IATIAACKKVADEL----------NGEIQIEIYGN-WTMQDA----K 126 (218)
T ss_dssp HHHHHHHHHT--CSEEEEETTSC----------HHHHHHHHHHHHHH----------TCEEEEECCSS-CCHHHH----H
T ss_pred HHHHHHHhcC--CCEEEEecCCC----------HHHHHHHHHHHHHh----------CCccceeeeec-CCHHHH----H
Confidence 4665555555 99999986542 13355666666543 3455543 334 343333 3
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|+|.+++.-++. .+..|....+..++.+++++. .++||+..||| +++++.+.+++|
T Consensus 127 ~~~~~g~d~v~~~~~~~---------------~~~~g~~~~~~~l~~i~~~~~---~~~pi~v~GGI-~~~~~~~~~~aG 187 (218)
T 3jr2_A 127 AWVDLGITQAIYHRSRD---------------AELAGIGWTTDDLDKMRQLSA---LGIELSITGGI-VPEDIYLFEGIK 187 (218)
T ss_dssp HHHHTTCCEEEEECCHH---------------HHHHTCCSCHHHHHHHHHHHH---TTCEEEEESSC-CGGGGGGGTTSC
T ss_pred HHHHcCccceeeeeccc---------------cccCCCcCCHHHHHHHHHHhC---CCCCEEEECCC-CHHHHHHHHHcC
Confidence 34556999877632210 011122222233444444443 37999999999 599999999999
Q ss_pred CCEEEEchhhh
Q 012517 417 ATLVQLYTAFA 427 (462)
Q Consensus 417 Ad~Vqv~Tali 427 (462)
||.|-++|++.
T Consensus 188 Ad~vvvGsaI~ 198 (218)
T 3jr2_A 188 TKTFIAGRALA 198 (218)
T ss_dssp EEEEEESGGGS
T ss_pred CCEEEEchhhc
Confidence 99999999985
No 162
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.60 E-value=0.00033 Score=71.82 Aligned_cols=101 Identities=23% Similarity=0.324 Sum_probs=70.1
Q ss_pred CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccC
Q 012517 290 GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETG 369 (462)
Q Consensus 290 ~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~G 369 (462)
+++...++++.+++. ..|+++++.+. ...+.++.+.+.|+|.+.+..... .. +.+
T Consensus 140 d~~~~~~~i~~~~~~----------g~~v~~~v~~~----~~~e~a~~~~~agad~i~i~~~~~--~~---------~~~ 194 (393)
T 2qr6_A 140 DTELLSERIAQVRDS----------GEIVAVRVSPQ----NVREIAPIVIKAGADLLVIQGTLI--SA---------EHV 194 (393)
T ss_dssp CHHHHHHHHHHHHHT----------TSCCEEEECTT----THHHHHHHHHHTTCSEEEEECSSC--CS---------SCC
T ss_pred CHHHHHHHHHHHhhc----------CCeEEEEeCCc----cHHHHHHHHHHCCCCEEEEeCCcc--cc---------ccC
Confidence 455666666666542 57999999874 345677788889999997653220 00 111
Q ss_pred CCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 012517 370 GLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 370 GlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~T 424 (462)
++.. ....+.++++.+ ++|||. |||.|++||..++++|||.|.+++
T Consensus 195 ---~~~~---~~~~i~~l~~~~--~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 195 ---NTGG---EALNLKEFIGSL--DVPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp ---CC--------CHHHHHHHC--SSCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred ---CCcc---cHHHHHHHHHhc--CCCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 1111 233467888887 799998 999999999999999999999976
No 163
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=97.60 E-value=0.00064 Score=70.31 Aligned_cols=145 Identities=10% Similarity=-0.003 Sum_probs=104.9
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..++.. ..+++ ++++.++++.+ .++.+.+++.+....|. .+.+...+.+++|+++. +.+.+|+
T Consensus 169 ~~y~s~~~-~~~~e---~~~~~a~~~~~~Gf~~iKik~g~gp~dg~---~~~~~die~v~avReav-------G~d~~L~ 234 (412)
T 3stp_A 169 PVYYSKLY-AGSIE---AMQKEAEEAMKGGYKAFKSRFGYGPKDGM---PGMRENLKRVEAVREVI-------GYDNDLM 234 (412)
T ss_dssp EEEEECCC-SCCHH---HHHHHHHHHHTTTCSEEEEECCCCGGGHH---HHHHHHHHHHHHHHHHH-------CSSSEEE
T ss_pred EEEEEecC-CCCHH---HHHHHHHHHHHcCCCEEEEecccCccccc---chHHHHHHHHHHHHHHc-------CCCCeEE
Confidence 45555321 12455 77777776654 59999999876311010 11234556677777665 4578999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|.....++.++..++++.+++.|++.|- + |+.+-..+..+++++.+ .+||++
T Consensus 235 vDaN~~~~~~~Ai~~~~~Le~~~i~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPIa~ 286 (412)
T 3stp_A 235 LECYMGWNLDYAKRMLPKLAPYEPRWLE---------E-----------------PVIADDVAGYAELNAMN--IVPISG 286 (412)
T ss_dssp EECTTCSCHHHHHHHHHHHGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHHTC--SSCEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCCcccHHHHHHHHhCC--CCCEEe
Confidence 9998888888999999999999988763 1 11222467788999988 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
.+.+.+.+|+.++++.| +|+||+--+.+
T Consensus 287 dE~~~~~~~~~~li~~~a~D~v~ik~~~~ 315 (412)
T 3stp_A 287 GEHEFSVIGCAELINRKAVSVLQYDTNRV 315 (412)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEecChhhc
Confidence 99999999999999987 89999877764
No 164
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=97.59 E-value=0.00084 Score=69.02 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=96.9
Q ss_pred HHHHHHHHHHcc-cCcEEEEecc------C----CCCCC--cccc--cCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVS------S----PNTPG--LRML--QGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvS------s----Pnt~g--lr~l--q~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK 321 (462)
++|.+.++++.+ .++.+.+++. . |.++- .... .+.+...+++++|+++. +.+++|+|+
T Consensus 152 ~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~-------G~d~~l~vD 224 (410)
T 2gl5_A 152 EEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM-------GDDADIIVE 224 (410)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH-------CSSSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc-------CCCCEEEEE
Confidence 377777776654 5899999862 2 11110 0001 12245567777777765 457899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec
Q 012517 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG 401 (462)
Q Consensus 322 ispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G 401 (462)
....++.++..++++.+++.|++.|- + |+.+...+..+++++.+ ++||++.+
T Consensus 225 an~~~~~~~ai~~~~~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE 276 (410)
T 2gl5_A 225 IHSLLGTNSAIQFAKAIEKYRIFLYE---------E-----------------PIHPLNSDNMQKVSRST--TIPIATGE 276 (410)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCEEEEE---------C-----------------SSCSSCHHHHHHHHHHC--SSCEEECT
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEE---------C-----------------CCChhhHHHHHHHHhhC--CCCEEecC
Confidence 98778888999999999998877542 1 11223467788999988 79999999
Q ss_pred CCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 402 GISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 402 GI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
.+.+.+++.+.++.| +|+||+--.-
T Consensus 277 ~~~~~~~~~~~i~~~~~d~v~ik~~~ 302 (410)
T 2gl5_A 277 RSYTRWGYRELLEKQSIAVAQPDLCL 302 (410)
T ss_dssp TCCTTHHHHHHHHTTCCSEECCCTTT
T ss_pred CcCCHHHHHHHHHcCCCCEEecCccc
Confidence 999999999999988 8999885543
No 165
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.58 E-value=0.00094 Score=68.58 Aligned_cols=125 Identities=14% Similarity=0.073 Sum_probs=97.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+|.+.++++.+ .++.+.+++..+ +.+...+++++|+++. +.+++|.|+....++.++..++++
T Consensus 178 ~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~d~e~v~avR~av-------G~d~~l~vDan~~~~~~~ai~~~~ 241 (398)
T 2pp0_A 178 QVLKNVVISRENGIGGIKLKVGQP---------NCAEDIRRLTAVREAL-------GDEFPLMVDANQQWDRETAIRMGR 241 (398)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCCS---------CHHHHHHHHHHHHHHH-------CSSSCEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEecCCC---------CHHHHHHHHHHHHHHc-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 67777766654 589999987642 2345567888888775 457899999988888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- - |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.|
T Consensus 242 ~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 293 (398)
T 2pp0_A 242 KMEQFNLIWIE-------E-------------------PLDAYDIEGHAQLAAAL--DTPIATGEMLTSFREHEQLILGN 293 (398)
T ss_dssp HHGGGTCSCEE-------C-------------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTT
T ss_pred HHHHcCCceee-------C-------------------CCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcC
Confidence 99999988542 1 11122467778899988 79999999999999999999988
Q ss_pred -CCEEEEchhh
Q 012517 417 -ATLVQLYTAF 426 (462)
Q Consensus 417 -Ad~Vqv~Tal 426 (462)
+|+||+--.-
T Consensus 294 ~~d~v~ik~~~ 304 (398)
T 2pp0_A 294 ASDFVQPDAPR 304 (398)
T ss_dssp CCSEECCCHHH
T ss_pred CCCEEEeCccc
Confidence 8999986655
No 166
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=97.57 E-value=0.00093 Score=68.63 Aligned_cols=133 Identities=12% Similarity=0.033 Sum_probs=96.7
Q ss_pred HHHHHHHHHcc-cCcEEEEecc------C----CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC
Q 012517 258 DYVQGVHTLSQ-YADYLVINVS------S----PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL 326 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvS------s----Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl 326 (462)
+|.+.++++.+ .++.+.+++. . |.++ .-...+.+...+++++|+++. +.+++|+++....+
T Consensus 155 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~-~~~~~~~~~~~e~v~avR~a~-------G~d~~l~vDan~~~ 226 (407)
T 2o56_A 155 QYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNG-PLTDKILRLGYDRMAAIRDAV-------GPDVDIIAEMHAFT 226 (407)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCS-SCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECTTCS
T ss_pred HHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccC-CCchhHHHHHHHHHHHHHHhc-------CCCCEEEEECCCCC
Confidence 77777776654 5899999862 1 1111 000012245567777777765 45789999998878
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 327 ~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
+.++..++++.+++.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.
T Consensus 227 ~~~~a~~~~~~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~ 278 (407)
T 2o56_A 227 DTTSAIQFGRMIEELGIFYYE---------E-----------------PVMPLNPAQMKQVADKV--NIPLAAGERIYWR 278 (407)
T ss_dssp CHHHHHHHHHHHGGGCCSCEE---------C-----------------SSCSSSHHHHHHHHHHC--CSCEEECTTCCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEe---------C-----------------CCChhhHHHHHHHHHhC--CCCEEeCCCcCCH
Confidence 888999999999999888542 1 11223467788999988 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEchhh
Q 012517 407 EDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 407 ~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+++.+.++.| +|+||+=-.-
T Consensus 279 ~~~~~~i~~~~~d~v~ik~~~ 299 (407)
T 2o56_A 279 WGYRPFLENGSLSVIQPDICT 299 (407)
T ss_dssp HHHHHHHHTTCCSEECCCTTT
T ss_pred HHHHHHHHcCCCCEEecCccc
Confidence 9999999988 8999886544
No 167
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=97.56 E-value=0.00085 Score=69.21 Aligned_cols=145 Identities=13% Similarity=0.078 Sum_probs=100.8
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++. .+++ ++++.++++. ..+..+-+ +.+|.....-..++.+.-.+.+++|+++. +.+.+|+
T Consensus 116 ~~y~~~~~--~~~e---~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~av-------G~d~~L~ 182 (405)
T 3rr1_A 116 RTYSWVGG--DRPA---DVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSAF-------GNTVEFG 182 (405)
T ss_dssp EEEEECCC--SSHH---HHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHTT-------GGGSEEE
T ss_pred eeeEeCCC--CCHH---HHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHHh-------CCCceEE
Confidence 56666653 3565 5555555543 35889988 77764221111112233445666666543 3478999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|.....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++
T Consensus 183 vDaN~~~~~~~A~~~~~~L~~~~i~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPIa~ 234 (405)
T 3rr1_A 183 LDFHGRVSAPMAKVLIKELEPYRPLFIE---------E-----------------PVLAEQAETYARLAAHT--HLPIAA 234 (405)
T ss_dssp EECCSCBCHHHHHHHHHHHGGGCCSCEE---------C-----------------SSCCSSTHHHHHHHTTC--SSCEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCCcccHHHHHHHHhcC--CCCEEe
Confidence 9988888888999999999999887762 1 11122456778899988 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
.+.+.+.+|+.+.++.| +|+||+--+-
T Consensus 235 dE~i~~~~~~~~~l~~~a~d~v~~d~~~ 262 (405)
T 3rr1_A 235 GERMFSRFDFKRVLEAGGVSILQPDLSH 262 (405)
T ss_dssp CTTCCSHHHHHHHHHHCCCSEECCBTTT
T ss_pred cCCcCCHHHHHHHHHHhCCCeEEEChhh
Confidence 99999999999999987 8999987655
No 168
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=97.55 E-value=0.0011 Score=67.82 Aligned_cols=146 Identities=13% Similarity=0.045 Sum_probs=106.1
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
+++.+.++++.+ .++.+.+++.+++ .+...+++++|+++. +.+.+|.|.....++.++..+++
T Consensus 167 ~~~~~~a~~~~~~Gf~~iKik~g~~~---------~~~~~e~v~avr~a~-------g~~~~l~vDan~~~~~~~a~~~~ 230 (392)
T 1tzz_A 167 SMLRGEMRGYLDRGYNVVKMKIGGAP---------IEEDRMRIEAVLEEI-------GKDAQLAVDANGRFNLETGIAYA 230 (392)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECSSSC---------HHHHHHHHHHHHHHH-------TTTCEEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCC---------HHHHHHHHHHHHHhc-------CCCCeEEEECCCCCCHHHHHHHH
Confidence 367776666544 5899999987632 244567888888765 35789999988778888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+++.+.++.
T Consensus 231 ~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 282 (392)
T 1tzz_A 231 KMLRDYPLFWYE---------E-----------------VGDPLDYALQAALAEFY--PGPMATGENLFSHQDARNLLRY 282 (392)
T ss_dssp HHHTTSCCSEEE---------C-----------------CSCTTCHHHHHHHTTTC--CSCEEECTTCCSHHHHHHHHHH
T ss_pred HHHHHcCCCeec---------C-----------------CCChhhHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHc
Confidence 999999988652 1 11123467778888888 6999999999999999999998
Q ss_pred C-----CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 416 G-----ATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 416 G-----Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
| +|+||+--..+ .|..-..+ +.++.+++|+.
T Consensus 283 ~~~~~~~d~v~ik~~~~-GGit~~~~----i~~~A~~~gi~ 318 (392)
T 1tzz_A 283 GGMRPDRDWLQFDCALS-YGLCEYQR----TLEVLKTHGWS 318 (392)
T ss_dssp SCCCTTTCEECCCTTTT-TCHHHHHH----HHHHHHHTTCC
T ss_pred CCCccCCcEEEECcccc-CCHHHHHH----HHHHHHHCCCC
Confidence 8 99999876653 34322222 23445566654
No 169
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.54 E-value=0.0009 Score=64.71 Aligned_cols=123 Identities=18% Similarity=0.193 Sum_probs=85.5
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHc-CCcEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVAL-RLDGLI 347 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~-GvdgIi 347 (462)
.||++-++.++ + +.+.+.++++..++ -..-++|=+. +. .+ ++.+.+. |+|.|-
T Consensus 123 GAD~ilLi~a~-----l----~~~~l~~l~~~a~~----------lGl~~lvEv~---~~---eE-~~~A~~l~g~~iIG 176 (251)
T 1i4n_A 123 GADAILIIARI-----L----TAEQIKEIYEAAEE----------LGMDSLVEVH---SR---ED-LEKVFSVIRPKIIG 176 (251)
T ss_dssp TCSEEEEEGGG-----S----CHHHHHHHHHHHHT----------TTCEEEEEEC---SH---HH-HHHHHTTCCCSEEE
T ss_pred CCCEEEEeccc-----C----CHHHHHHHHHHHHH----------cCCeEEEEeC---CH---HH-HHHHHhcCCCCEEE
Confidence 39999999874 1 12456666666543 2577788775 22 22 5667788 999887
Q ss_pred EecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 348 ISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 348 vsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
+.|..... +...++...++.+.++.++++|+-|||.|++|+.++.++ |+.|-++++++
T Consensus 177 innr~l~t---------------------~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aim 234 (251)
T 1i4n_A 177 INTRDLDT---------------------FEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIM 234 (251)
T ss_dssp EECBCTTT---------------------CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHH
T ss_pred EeCccccc---------------------CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHc
Confidence 77753210 112345566777788777999999999999999999999 99999999998
Q ss_pred hcCCChHHHHHHHH
Q 012517 428 YGGPALIPQIKAEL 441 (462)
Q Consensus 428 ~~GP~~i~~i~~~L 441 (462)
. -++ +.+..++|
T Consensus 235 r-~~d-~~~~~~~l 246 (251)
T 1i4n_A 235 K-AEN-PRRFLEEM 246 (251)
T ss_dssp H-CSS-HHHHHHHH
T ss_pred C-CcC-HHHHHHHH
Confidence 5 244 33433343
No 170
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=97.53 E-value=0.0038 Score=63.05 Aligned_cols=135 Identities=13% Similarity=0.108 Sum_probs=100.1
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..++.+.+++.++ +.+...+++++|+++. +.+.+|.|+....++.++..++++
T Consensus 143 ~~~~~a~~~~~~Gf~~iKik~g~~---------~~~~d~~~v~avr~a~-------g~~~~l~vDan~~~~~~~a~~~~~ 206 (366)
T 1tkk_A 143 EMAADAENYLKQGFQTLKIKVGKD---------DIATDIARIQEIRKRV-------GSAVKLRLDANQGWRPKEAVTAIR 206 (366)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCSS---------CHHHHHHHHHHHHHHH-------CSSSEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCC---------CHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 5666665554 3589999998763 2344567788888765 357899999887788889999999
Q ss_pred HHHH--cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 337 VAVA--LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 337 ~~~~--~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
.+.+ .|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.++
T Consensus 207 ~l~~~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~ 258 (366)
T 1tkk_A 207 KMEDAGLGIELVE---------Q-----------------PVHKDDLAGLKKVTDAT--DTPIMADESVFTPRQAFEVLQ 258 (366)
T ss_dssp HHHHTTCCEEEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH
T ss_pred HHhhcCCCceEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEEcCCCCCHHHHHHHHH
Confidence 9999 7776551 1 11122467778899888 799999999999999999999
Q ss_pred hC-CCEEEEchhhhhcCCChHHHH
Q 012517 415 AG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 415 aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
.| +|.||+--..+ .|..-..++
T Consensus 259 ~~~~d~v~ik~~~~-GGit~~~~i 281 (366)
T 1tkk_A 259 TRSADLINIKLMKA-GGISGAEKI 281 (366)
T ss_dssp HTCCSEEEECHHHH-TSHHHHHHH
T ss_pred hCCCCEEEeehhhh-cCHHHHHHH
Confidence 87 99999977664 454433443
No 171
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.52 E-value=0.00093 Score=62.66 Aligned_cols=141 Identities=8% Similarity=0.022 Sum_probs=83.8
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
.|.+.+.+++ ||++.++.... .+.+.++++.+++ ...++++++...++... ++.
T Consensus 71 t~~~~~~~~G--ad~itvh~~~g----------~~~l~~~~~~~~~----------~g~~~~~~ll~~~t~~~----~~~ 124 (216)
T 1q6o_A 71 ILSRMCFEAN--ADWVTVICCAD----------INTAKGALDVAKE----------FNGDVQIELTGYWTWEQ----AQQ 124 (216)
T ss_dssp HHHHHHHHTT--CSEEEEETTSC----------HHHHHHHHHHHHH----------TTCEEEEEECSCCCHHH----HHH
T ss_pred HHHHHHHhCC--CCEEEEeccCC----------HHHHHHHHHHHHH----------cCCCceeeeeeCCChhh----HHH
Confidence 3333333444 99999997541 1234455555443 15677787762333222 234
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCC
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGA 417 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGA 417 (462)
+.+.|.+-++++-..... + -|+.| +.+.++++++.++.++||+..|||. ++.+.+.+++||
T Consensus 125 l~~~~~~~~vl~~a~~~~-----------~-~G~~g------~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGa 185 (216)
T 1q6o_A 125 WRDAGIGQVVYHRSRDAQ-----------A-AGVAW------GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPI 185 (216)
T ss_dssp HHHTTCCEEEEECCHHHH-----------H-TTCCC------CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCC
T ss_pred HHhcCcHHHHHHHHHHHH-----------h-cCCCC------CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCC
Confidence 455677766663211100 1 12333 3456677777765468999999998 888999999999
Q ss_pred CEEEEchhhhhcCCChHHHHHHHHHHHH
Q 012517 418 TLVQLYTAFAYGGPALIPQIKAELAECL 445 (462)
Q Consensus 418 d~Vqv~Tali~~GP~~i~~i~~~L~~~l 445 (462)
|.+-++|++.. .++ +.+..+.+.+.+
T Consensus 186 d~ivvG~~I~~-a~d-p~~~~~~~~~~i 211 (216)
T 1q6o_A 186 HVFIAGRSIRD-AAS-PVEAARQFKRSI 211 (216)
T ss_dssp SEEEESHHHHT-SSC-HHHHHHHHHHHH
T ss_pred CEEEEeehhcC-CCC-HHHHHHHHHHHH
Confidence 99999999854 344 333334444333
No 172
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.51 E-value=0.00063 Score=66.10 Aligned_cols=115 Identities=19% Similarity=0.205 Sum_probs=75.7
Q ss_pred ccCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC---CChhh-HHHHHHHHHHc
Q 012517 268 QYADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD---LSKED-LEDIAAVAVAL 341 (462)
Q Consensus 268 ~~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd---l~~~~-~~~ia~~~~~~ 341 (462)
..||-|.+ |++- + .-.+.+.+.+-+.+|++++.. -+..+|+=-. +++++ +...++.+.++
T Consensus 97 ~GAdEIDmVinig~-----l-~~g~~~~v~~ei~~v~~a~~~--------~g~~lKvIlEt~~L~d~e~i~~a~~ia~ea 162 (260)
T 1p1x_A 97 YGADEVDVVFPYRA-----L-MAGNEQVGFDLVKACKEACAA--------ANVLLKVIIETGELKDEALIRKASEISIKA 162 (260)
T ss_dssp HTCSEEEEECCHHH-----H-HTTCCHHHHHHHHHHHHHHHH--------TTCEEEEECCHHHHCSHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccHHh-----h-hCCCHHHHHHHHHHHHHHhcc--------cCCeEEEEEecccCCcHHHHHHHHHHHHHh
Confidence 45887765 5430 0 012235667777778877631 1335666433 45566 67999999999
Q ss_pred CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh-----cCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 342 RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL-----TRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 342 GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~-----~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
|+|.|-.+ |.+. .|| .+.+.++.+++. ++.+++|-++|||.+.+||++++++|
T Consensus 163 GADfVKTS-TGf~-------------~~g--------At~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ag 220 (260)
T 1p1x_A 163 GADFIKTS-TGKV-------------AVN--------ATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIA 220 (260)
T ss_dssp TCSEEECC-CSCS-------------SCC--------CCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHH
T ss_pred CCCEEEeC-CCCC-------------CCC--------CCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhh
Confidence 99988633 3110 122 145555666665 56689999999999999999999998
Q ss_pred CC
Q 012517 417 AT 418 (462)
Q Consensus 417 Ad 418 (462)
|+
T Consensus 221 a~ 222 (260)
T 1p1x_A 221 DE 222 (260)
T ss_dssp HH
T ss_pred hh
Confidence 76
No 173
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.51 E-value=0.00019 Score=68.78 Aligned_cols=49 Identities=22% Similarity=0.161 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 378 SLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 378 ~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+...++++++++.+. ++|++.-|||+|++|+.++++ |||.|.++|+++.
T Consensus 175 ~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 175 YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 223 (234)
T ss_dssp CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHH
T ss_pred cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 346789999999874 599999999999999999999 9999999999974
No 174
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=97.51 E-value=0.00086 Score=68.44 Aligned_cols=126 Identities=8% Similarity=0.029 Sum_probs=96.4
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|++.++++.+ .++.+.+++.++ +.+...+++++|+++. +.+.+|+|+....++.++..+++
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~d~e~v~avR~a~-------G~d~~l~vDan~~~~~~~a~~~~ 204 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGT---------SFKEDVRHINALQHTA-------GSSITMILDANQSYDAAAAFKWE 204 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSS---------CHHHHHHHHHHHHHHH-------CTTSEEEEECTTCCCHHHHHTTH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC---------CHHHHHHHHHHHHHhh-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 477777776654 589999998652 2345667888888775 45789999998888888888999
Q ss_pred HHHHHc-CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 336 AVAVAL-RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 336 ~~~~~~-GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
+.+.+. |++.|- .| +.+...+..+++++.+ ++||++.+.+.+.+++.+.++
T Consensus 205 ~~l~~~~~i~~iE-------qP-------------------~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 256 (382)
T 2gdq_A 205 RYFSEWTNIGWLE-------EP-------------------LPFDQPQDYAMLRSRL--SVPVAGGENMKGPAQYVPLLS 256 (382)
T ss_dssp HHHTTCSCEEEEE-------CC-------------------SCSSCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHH
T ss_pred HHHhhccCCeEEE-------CC-------------------CCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH
Confidence 999888 777542 10 1122467778899888 799999999999999999999
Q ss_pred hC-CCEEEEchhh
Q 012517 415 AG-ATLVQLYTAF 426 (462)
Q Consensus 415 aG-Ad~Vqv~Tal 426 (462)
.| +|+||+=-.-
T Consensus 257 ~~~~d~v~ik~~~ 269 (382)
T 2gdq_A 257 QRCLDIIQPDVMH 269 (382)
T ss_dssp TTCCSEECCCTTT
T ss_pred cCCCCEEecCccc
Confidence 87 8999885544
No 175
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.50 E-value=0.0035 Score=59.84 Aligned_cols=110 Identities=17% Similarity=0.198 Sum_probs=76.0
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
|.++.+..++ ||++. ||++. .++++..++. .+|++.=+. +. .+ +..
T Consensus 97 ~~a~~Ai~AG--A~fIv----sP~~~-----------~~vi~~~~~~----------gi~~ipGv~---Tp---tE-i~~ 142 (232)
T 4e38_A 97 EQALAAKEAG--ATFVV----SPGFN-----------PNTVRACQEI----------GIDIVPGVN---NP---ST-VEA 142 (232)
T ss_dssp HHHHHHHHHT--CSEEE----CSSCC-----------HHHHHHHHHH----------TCEEECEEC---SH---HH-HHH
T ss_pred HHHHHHHHcC--CCEEE----eCCCC-----------HHHHHHHHHc----------CCCEEcCCC---CH---HH-HHH
Confidence 3444555555 99986 56542 2455554432 578876654 32 23 345
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCC
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGA 417 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGA 417 (462)
+++.|+|.|-+.-+. ..|| .+.++.++..++ ++|++.+|||+ ++.+.+++++||
T Consensus 143 A~~~Gad~vK~FPa~--------------~~gG----------~~~lkal~~p~p-~ip~~ptGGI~-~~n~~~~l~aGa 196 (232)
T 4e38_A 143 ALEMGLTTLKFFPAE--------------ASGG----------ISMVKSLVGPYG-DIRLMPTGGIT-PSNIDNYLAIPQ 196 (232)
T ss_dssp HHHTTCCEEEECSTT--------------TTTH----------HHHHHHHHTTCT-TCEEEEBSSCC-TTTHHHHHTSTT
T ss_pred HHHcCCCEEEECcCc--------------cccC----------HHHHHHHHHHhc-CCCeeeEcCCC-HHHHHHHHHCCC
Confidence 678999999763210 1133 377888988875 79999999995 899999999999
Q ss_pred CEEEEchhhh
Q 012517 418 TLVQLYTAFA 427 (462)
Q Consensus 418 d~Vqv~Tali 427 (462)
..+.++|.+.
T Consensus 197 ~~~vgGs~l~ 206 (232)
T 4e38_A 197 VLACGGTWMV 206 (232)
T ss_dssp BCCEEECGGG
T ss_pred eEEEECchhc
Confidence 9999988875
No 176
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=97.49 E-value=0.0016 Score=66.30 Aligned_cols=144 Identities=10% Similarity=0.022 Sum_probs=102.3
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++...++. .+++ ++.+.++++.+ .++.+.+++.+| +.+...+++++|+++. +.+.+|.
T Consensus 136 ~~~~~~~~--~~~e---~~~~~a~~~~~~Gf~~iKik~g~~---------~~~~~~e~v~avr~a~-------g~~~~l~ 194 (378)
T 2qdd_A 136 PINSSIST--GTPD---QMLGLIAEAAAQGYRTHSAKIGGS---------DPAQDIARIEAISAGL-------PDGHRVT 194 (378)
T ss_dssp EBEEEECS--CCHH---HHHHHHHHHHHHTCCEEEEECCSS---------CHHHHHHHHHHHHHSC-------CTTCEEE
T ss_pred ceEEEecC--CCHH---HHHHHHHHHHHHhhhheeecCCCC---------ChHHHHHHHHHHHHHh-------CCCCEEE
Confidence 34445543 2454 66666666543 589999999875 2244567777777653 3478999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
++....++.++..++++.++ .|+ .|- + |+. ..+..+++++.+ ++||++
T Consensus 195 vDan~~~~~~~a~~~~~~l~-~~i-~iE---------q-----------------P~~--d~~~~~~l~~~~--~iPI~~ 242 (378)
T 2qdd_A 195 FDVNRAWTPAIAVEVLNSVR-ARD-WIE---------Q-----------------PCQ--TLDQCAHVARRV--ANPIML 242 (378)
T ss_dssp EECTTCCCHHHHHHHHTSCC-CCC-EEE---------C-----------------CSS--SHHHHHHHHTTC--CSCEEE
T ss_pred EeCCCCCCHHHHHHHHHHhC-CCc-EEE---------c-----------------CCC--CHHHHHHHHHhC--CCCEEE
Confidence 99887788778888888776 666 431 0 111 467778899888 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHH
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
.+.+.+.+++.+.++.| +|+||+--..+ .|+.-..++.
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~ 281 (378)
T 2qdd_A 243 DECLHEFSDHLAAWSRGACEGVKIKPNRV-GGLTRARQIR 281 (378)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEeccccc-CCHHHHHHHH
Confidence 99999999999999987 99999987764 4554444443
No 177
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=97.48 E-value=0.0012 Score=67.61 Aligned_cols=133 Identities=14% Similarity=-0.003 Sum_probs=96.1
Q ss_pred HHHHHHHHHcc-cCcEEEEec------cC----CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC
Q 012517 258 DYVQGVHTLSQ-YADYLVINV------SS----PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL 326 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNv------Ss----Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl 326 (462)
+|.+.++++.+ .++.+.+++ .+ |.++ .-...+.+...+++++|+++. +.+++|+++....+
T Consensus 149 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g-~~~~~~~~~~~e~v~avr~av-------G~d~~l~vDan~~~ 220 (403)
T 2ox4_A 149 EYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEG-PLPSETIKIGVERVEAIRNAV-------GPDVDIIVENHGHT 220 (403)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSS-SCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECTTCS
T ss_pred HHHHHHHHHHHcCCCEEEEeccccCCccccccCcccC-CCchHHHHHHHHHHHHHHHHh-------CCCCeEEEECCCCC
Confidence 77777776654 589999986 22 2111 100112245567777777765 45789999998888
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 327 ~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
+.++..++++.+++.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.
T Consensus 221 ~~~~ai~~~~~l~~~~i~~iE---------~-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~ 272 (403)
T 2ox4_A 221 DLVSAIQFAKAIEEFNIFFYE---------E-----------------INTPLNPRLLKEAKKKI--DIPLASGERIYSR 272 (403)
T ss_dssp CHHHHHHHHHHHGGGCEEEEE---------C-----------------CSCTTSTHHHHHHHHTC--CSCEEECTTCCHH
T ss_pred CHHHHHHHHHHHHhhCCCEEe---------C-----------------CCChhhHHHHHHHHHhC--CCCEEecCCcCCH
Confidence 888999999999998877542 1 11122456778899988 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEchhh
Q 012517 407 EDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 407 ~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+++.+.++.| +|+||+--.-
T Consensus 273 ~~~~~~i~~~~~d~v~ik~~~ 293 (403)
T 2ox4_A 273 WGFLPFLEDRSIDVIQPDLGT 293 (403)
T ss_dssp HHHHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHHHcCCCCEEecCccc
Confidence 9999999988 8999886554
No 178
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=97.48 E-value=0.0039 Score=63.66 Aligned_cols=122 Identities=7% Similarity=-0.002 Sum_probs=91.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++.+ .++.+.+++.++ +.+...+++++|+++. +.+.+|+|.....++.++..++++
T Consensus 148 ~~~~~a~~~~~~Gf~~vKik~g~~---------~~~~~~e~v~avR~a~-------G~~~~l~vDan~~~~~~~a~~~~~ 211 (389)
T 2oz8_A 148 AFVSLFSHAASIGYSAFKIKVGHR---------DFDRDLRRLELLKTCV-------PAGSKVMIDPNEAWTSKEALTKLV 211 (389)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCS---------SHHHHHHHHHHHHTTS-------CTTCEEEEECTTCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEccCCC---------CHHHHHHHHHHHHHhh-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 67766666544 589999998652 1234456777776653 357899999887788889999999
Q ss_pred HHHH--cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 337 VAVA--LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 337 ~~~~--~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
.+.+ .+++.|- . |+.+...+..+++++.++ ++||++.+.+ +.+|+.+.++
T Consensus 212 ~l~~~g~~i~~iE-------q-------------------P~~~~~~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~i~ 263 (389)
T 2oz8_A 212 AIREAGHDLLWVE-------D-------------------PILRHDHDGLRTLRHAVT-WTQINSGEYL-DLQGKRLLLE 263 (389)
T ss_dssp HHHHTTCCCSEEE-------S-------------------CBCTTCHHHHHHHHHHCC-SSEEEECTTC-CHHHHHHHHH
T ss_pred HHHhcCCCceEEe-------C-------------------CCCCcCHHHHHHHHhhCC-CCCEEeCCCC-CHHHHHHHHH
Confidence 9999 6655431 1 111224677788888873 5999999999 9999999999
Q ss_pred hC-CCEEEEc
Q 012517 415 AG-ATLVQLY 423 (462)
Q Consensus 415 aG-Ad~Vqv~ 423 (462)
.| +|+||+-
T Consensus 264 ~~~~d~v~ik 273 (389)
T 2oz8_A 264 AHAADILNVH 273 (389)
T ss_dssp TTCCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 88 9999997
No 179
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=97.48 E-value=0.0021 Score=66.09 Aligned_cols=135 Identities=13% Similarity=0.029 Sum_probs=98.1
Q ss_pred HHHHHHHHHHcc-cCcEEEEecc----CCCCCCccccc---CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCCh
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVS----SPNTPGLRMLQ---GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvS----sPnt~glr~lq---~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~ 328 (462)
++|.+.++++.+ .++.+.+.+. ...++-...+. +.+...+++++|+++. +.+++|++.....++.
T Consensus 151 ~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~-------G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 151 EEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAV-------GPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH-------CSSSEEEEECTTCCCH
T ss_pred HHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCH
Confidence 477777776654 5899999983 21111001111 2245567777777765 4578999999887888
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..++++.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.++
T Consensus 224 ~~a~~~~~~l~~~~i~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~ 275 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLE---------E-----------------PTPPENLDALAEVRRST--STPICAGENVYTRFD 275 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHTTC--SSCEEECTTCCSHHH
T ss_pred HHHHHHHHHHhhcCCCeEE---------C-----------------CCChhhHHHHHHHHhhC--CCCEEeCCCcCCHHH
Confidence 8999999999999988652 1 11123467788899988 799999999999999
Q ss_pred HHHHHHhC-CCEEEEchhh
Q 012517 409 AYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 409 A~e~i~aG-Ad~Vqv~Tal 426 (462)
+.+.++.| +|+||+=-.-
T Consensus 276 ~~~~i~~~~~d~v~ik~~~ 294 (410)
T 2qq6_A 276 FRELFAKRAVDYVMPDVAK 294 (410)
T ss_dssp HHHHHHTTCCSEECCBHHH
T ss_pred HHHHHHcCCCCEEecCccc
Confidence 99999988 8999885444
No 180
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.47 E-value=0.0009 Score=69.47 Aligned_cols=125 Identities=11% Similarity=0.088 Sum_probs=95.9
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|.+.++++.+ .++.+.+++.. +.+...+++++|+++. +.+.+|.|.....++.++..+++
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~----------~~~~d~e~v~avR~av-------G~d~~l~vDan~~~~~~eai~~~ 249 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD----------AARVDIERVRHVRKVL-------GDEVDILTDANTAYTMADARRVL 249 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS----------CHHHHHHHHHHHHHHH-------CTTSEEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC----------CHHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCHHHHHHHH
Confidence 367776666544 58999998764 2345567888888775 35789999988778888999999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC-ccEEEecCCCCHHHHHHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK-IPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~-ipIIg~GGI~s~~dA~e~i~ 414 (462)
+.+.+.|++.|- . |+.+...+..+++++.+ + +||++.+.+.+.+++.+.++
T Consensus 250 ~~L~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~~iPIa~dE~~~~~~~~~~~i~ 301 (428)
T 3bjs_A 250 PVLAEIQAGWLE-------E-------------------PFACNDFASYREVAKIT--PLVPIAAGENHYTRFEFGQMLD 301 (428)
T ss_dssp HHHHHTTCSCEE-------C-------------------CSCTTCHHHHHHHTTTC--SSSCEEECTTCCSHHHHHHHHT
T ss_pred HHHHhcCCCEEE-------C-------------------CCCccCHHHHHHHHHhC--CCCcEEcCCCcCCHHHHHHHHH
Confidence 999999988552 1 11122467778888888 6 99999999999999999999
Q ss_pred hC-CCEEEEchhh
Q 012517 415 AG-ATLVQLYTAF 426 (462)
Q Consensus 415 aG-Ad~Vqv~Tal 426 (462)
.| +|+||+=-..
T Consensus 302 ~~~~d~v~ik~~~ 314 (428)
T 3bjs_A 302 AGAVQVWQPDLSK 314 (428)
T ss_dssp TCCEEEECCBTTT
T ss_pred hCCCCEEEeCccc
Confidence 88 8888886554
No 181
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.46 E-value=0.0028 Score=61.18 Aligned_cols=124 Identities=13% Similarity=0.169 Sum_probs=87.5
Q ss_pred CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEe
Q 012517 270 ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIIS 349 (462)
Q Consensus 270 aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivs 349 (462)
||+|-+-+++- +.+.+.++++...+ + ..-++|-+. +.+| ++.+.+.|++-|=+-
T Consensus 127 ADaILLI~a~L---------~~~~l~~l~~~A~~----l------Gl~~LvEVh---~~~E----l~rAl~~~a~iIGIN 180 (258)
T 4a29_A 127 ADTVLLIVKIL---------TERELESLLEYARS----Y------GMEPLILIN---DEND----LDIALRIGARFIGIM 180 (258)
T ss_dssp CSEEEEEGGGS---------CHHHHHHHHHHHHH----T------TCCCEEEES---SHHH----HHHHHHTTCSEEEEC
T ss_pred CCeeehHHhhc---------CHHHHHHHHHHHHH----H------hHHHHHhcc---hHHH----HHHHhcCCCcEEEEe
Confidence 99998877652 23456666665543 2 456677664 2223 355667899876555
Q ss_pred cCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc
Q 012517 350 NTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG 429 (462)
Q Consensus 350 NTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~ 429 (462)
|.... . +...++...++.+.++.++.+|+-+||.+++|+..+..+|++.|-||++||.
T Consensus 181 NRnL~------t---------------f~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr- 238 (258)
T 4a29_A 181 SRDFE------T---------------GEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMR- 238 (258)
T ss_dssp SBCTT------T---------------CCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHH-
T ss_pred CCCcc------c---------------cccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhC-
Confidence 54321 0 2345677788899998899999999999999999999999999999999986
Q ss_pred CCChHHHHHHHH
Q 012517 430 GPALIPQIKAEL 441 (462)
Q Consensus 430 GP~~i~~i~~~L 441 (462)
.|+-.+++.++.
T Consensus 239 ~~d~~~~Li~G~ 250 (258)
T 4a29_A 239 NPEKIKELIEGS 250 (258)
T ss_dssp CTTHHHHHHC--
T ss_pred CCcHHHHHHcCc
Confidence 587666665543
No 182
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=97.41 E-value=0.0012 Score=67.49 Aligned_cols=134 Identities=12% Similarity=0.060 Sum_probs=97.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCc--cc------ccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCCh
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGL--RM------LQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK 328 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~gl--r~------lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~ 328 (462)
+|.+.++++.+ .++.+.+++.++...+. +. ..+.+...+++++|+++. +.+++|++.....++.
T Consensus 140 ~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~-------G~d~~l~vD~n~~~~~ 212 (392)
T 2poz_A 140 EFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA-------GPEIELMVDLSGGLTT 212 (392)
T ss_dssp HHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECTTCSCH
T ss_pred HHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCH
Confidence 77777666644 58999999874211000 11 112355667788887765 4578999999887888
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..++++.+++.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.++
T Consensus 213 ~~a~~~~~~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~ 264 (392)
T 2poz_A 213 DETIRFCRKIGELDICFVE---------E-----------------PCDPFDNGALKVISEQI--PLPIAVGERVYTRFG 264 (392)
T ss_dssp HHHHHHHHHHGGGCEEEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHH
Confidence 8999999999998877542 1 11122467788899988 799999999999999
Q ss_pred HHHHHHhC-CCEEEEchhh
Q 012517 409 AYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 409 A~e~i~aG-Ad~Vqv~Tal 426 (462)
+.+.++.| +|+||+=-.-
T Consensus 265 ~~~~i~~~~~d~v~ik~~~ 283 (392)
T 2poz_A 265 FRKIFELQACGIIQPDIGT 283 (392)
T ss_dssp HHHHHTTTCCSEECCCTTT
T ss_pred HHHHHHcCCCCEEecCccc
Confidence 99999987 8999986544
No 183
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.41 E-value=0.001 Score=68.83 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=101.8
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCC--------------------Cccc---ccCchHHHH
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTP--------------------GLRM---LQGRKQLKD 296 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~--------------------glr~---lq~~~~l~~ 296 (462)
++...++. .+++ ++++.++++. ..+..+-+.+.+|... +... .++.+...+
T Consensus 134 ~~y~~~~~--~~~e---~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~ 208 (418)
T 3r4e_A 134 MVYGHANG--SDIA---ETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPK 208 (418)
T ss_dssp EEEEEEEE--SSHH---HHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHH
T ss_pred eEEEeCCC--CCHH---HHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 34444443 2555 5555555543 4689999999886421 0000 011234456
Q ss_pred HHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcC
Q 012517 297 LVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPL 376 (462)
Q Consensus 297 ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l 376 (462)
++++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|- .| +
T Consensus 209 ~v~avR~a~-------G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP--~----------------- 255 (418)
T 3r4e_A 209 LFEELRKTY-------GFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DC--T----------------- 255 (418)
T ss_dssp HHHHHHHHH-------CSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SC--S-----------------
T ss_pred HHHHHHHHc-------CCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CC--C-----------------
Confidence 677777665 45789999998888888999999999999988773 11 1
Q ss_pred ccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 377 LSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 377 ~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
.+...+..+++++.+ .+||++.+.+.+.+|+.++++.| +|+||+--+.+
T Consensus 256 ~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~ 305 (418)
T 3r4e_A 256 PAENQEAFRLVRQHT--VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGA 305 (418)
T ss_dssp CCSSGGGGHHHHHHC--CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred CccCHHHHHHHHhcC--CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 111234467888888 79999999999999999999988 89999876653
No 184
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.40 E-value=0.00028 Score=88.35 Aligned_cols=43 Identities=19% Similarity=0.097 Sum_probs=39.2
Q ss_pred HHHHHhcCCCccEEEecCCCCHHHHHHHH-----------HhCCCEEEEchhhhhc
Q 012517 385 KEMYLLTRGKIPLIGCGGISSGEDAYRKI-----------RAGATLVQLYTAFAYG 429 (462)
Q Consensus 385 ~~i~~~~~~~ipIIg~GGI~s~~dA~e~i-----------~aGAd~Vqv~Tali~~ 429 (462)
.++++.+ ++|||+.|||.+++++..++ ..|||.|||+|.|+..
T Consensus 599 ~~ir~~~--~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 599 SELRSRS--NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp HHHTTCT--TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred HHHhhcC--CCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 6777766 79999999999999999999 9999999999999863
No 185
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.40 E-value=0.0057 Score=61.31 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=90.4
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..++.+.+++.. +.+.-.+++++|+++ +.+.+|.+.....++.++..++++
T Consensus 142 ~~~~~a~~~~~~Gf~~iKik~g~----------~~~~d~~~v~avr~~--------g~~~~l~vDan~~~~~~~a~~~~~ 203 (345)
T 2zad_A 142 NRVKEAKKIFEEGFRVIKIKVGE----------NLKEDIEAVEEIAKV--------TRGAKYIVDANMGYTQKEAVEFAR 203 (345)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCS----------CHHHHHHHHHHHHHH--------STTCEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCEEEEeecC----------CHHHHHHHHHHHHhh--------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 6666666654 368999998764 223345667777765 247888887766678788889999
Q ss_pred HHHHcCCc--EEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 337 VAVALRLD--GLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 337 ~~~~~Gvd--gIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
.+.+.|++ .|- . |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.++
T Consensus 204 ~l~~~~i~~~~iE-------~-------------------P~~~~~~~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~ 255 (345)
T 2zad_A 204 AVYQKGIDIAVYE-------Q-------------------PVRREDIEGLKFVRFHS--PFPVAADESARTKFDVMRLVK 255 (345)
T ss_dssp HHHHTTCCCSEEE-------C-------------------CSCTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHH
T ss_pred HHHhcCCCeeeee-------C-------------------CCCcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHH
Confidence 99999988 542 1 11223467778899888 799999999999999999999
Q ss_pred hC-CCEEEE
Q 012517 415 AG-ATLVQL 422 (462)
Q Consensus 415 aG-Ad~Vqv 422 (462)
.| +|.||+
T Consensus 256 ~~~~d~v~i 264 (345)
T 2zad_A 256 EEAVDYVNI 264 (345)
T ss_dssp HTCCSEEEE
T ss_pred hCCCCEEEE
Confidence 88 999999
No 186
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=97.40 E-value=0.0033 Score=63.68 Aligned_cols=143 Identities=15% Similarity=0.041 Sum_probs=102.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++.. +++ ++.+.++++.+ .+|.+.+++.. +.+...+++++|+++. +.+.+|.
T Consensus 137 p~~~~~~~~--~~~---~~~~~a~~~~~~Gf~~iKik~g~----------~~~~~~e~v~avr~a~-------g~~~~l~ 194 (371)
T 2ps2_A 137 PLISSIYVG--EPE---DMRARVAKYRAKGYKGQSVKISG----------EPVTDAKRITAALANQ-------QPDEFFI 194 (371)
T ss_dssp EBEEEECSC--CHH---HHHHHHHHHHTTTCCEEEEECCS----------CHHHHHHHHHHHTTTC-------CTTCEEE
T ss_pred EEEEEeCCC--CHH---HHHHHHHHHHHhChheEEeecCC----------CHHHHHHHHHHHHHhc-------CCCCEEE
Confidence 455555432 454 67777776654 58999999863 2344556777776543 3478999
Q ss_pred EEecCCCChhhHHHHHHHH-HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVA-VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~-~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
++....++.++..++++.+ .+.|+ .|- + |+. ..+..+++++.+ ++||+
T Consensus 195 vDan~~~~~~~a~~~~~~l~~~~~i-~iE---------~-----------------P~~--~~~~~~~l~~~~--~iPI~ 243 (371)
T 2ps2_A 195 VDANGKLSVETALRLLRLLPHGLDF-ALE---------A-----------------PCA--TWRECISLRRKT--DIPII 243 (371)
T ss_dssp EECTTBCCHHHHHHHHHHSCTTCCC-EEE---------C-----------------CBS--SHHHHHHHHTTC--CSCEE
T ss_pred EECCCCcCHHHHHHHHHHHHhhcCC-cCc---------C-----------------CcC--CHHHHHHHHhhC--CCCEE
Confidence 9998778888888999999 88887 441 0 111 356778898888 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.+.+.+.+|+.+.++.| +|+||+--.-+ .|..-..++
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i 282 (371)
T 2ps2_A 244 YDELATNEMSIVKILADDAAEGIDLKISKA-GGLTRGRRQ 282 (371)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEEEHHHH-TSHHHHHHH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEechhhc-CCHHHHHHH
Confidence 999999999999999987 89999977664 454333333
No 187
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.39 E-value=0.0012 Score=67.27 Aligned_cols=127 Identities=16% Similarity=0.070 Sum_probs=98.4
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC-hhhHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS-KEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~-~~~~~~ia 335 (462)
++++.++++. ..++.+.+++.++. .+.+.-.+.+++|+++. +.+.+|+|.....++ .++..+++
T Consensus 149 ~~~~~a~~~~~~Gf~~iKlk~g~~g-------~~~~~d~~~v~avR~a~-------g~~~~l~vDan~~~~d~~~A~~~~ 214 (374)
T 3sjn_A 149 DNVAIVQGLKDQGFSSIKFGGGVMG-------DDPDTDYAIVKAVREAA-------GPEMEVQIDLASKWHTCGHSAMMA 214 (374)
T ss_dssp GGHHHHHHHHTTTCSEEEEECTTTT-------SCHHHHHHHHHHHHHHH-------CSSSEEEEECTTTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeccCCCC-------CCHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCCHHHHHHHH
Confidence 6666666654 36999999998752 12355567778887765 457899999988888 88889999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- + |+.+-..+..+++++.+ .+||++.+.+.+.+|+.+.++.
T Consensus 215 ~~l~~~~i~~iE---------q-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~ 266 (374)
T 3sjn_A 215 KRLEEFNLNWIE---------E-----------------PVLADSLISYEKLSRQV--SQKIAGGESLTTRYEFQEFITK 266 (374)
T ss_dssp HHSGGGCCSEEE---------C-----------------SSCTTCHHHHHHHHHHC--SSEEEECTTCCHHHHHHHHHHH
T ss_pred HHhhhcCceEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc
Confidence 999999988762 1 11122467788899988 7999999999999999999987
Q ss_pred C-CCEEEEchhh
Q 012517 416 G-ATLVQLYTAF 426 (462)
Q Consensus 416 G-Ad~Vqv~Tal 426 (462)
| +|.||+--+.
T Consensus 267 ~~~d~v~~k~~~ 278 (374)
T 3sjn_A 267 SNADIVQPDITR 278 (374)
T ss_dssp HCCSEECCBTTT
T ss_pred CCCCEEEeCccc
Confidence 6 8999987665
No 188
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.35 E-value=0.0022 Score=65.95 Aligned_cols=144 Identities=16% Similarity=0.139 Sum_probs=102.8
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCC--Ccc-cccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTP--GLR-MLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~--glr-~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ 333 (462)
++++.++++. ..+..+-+++.+|... |.. ..++.+...+.+++|+++. +.+.+|+|+....++.++..+
T Consensus 154 ~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDan~~~~~~~A~~ 226 (404)
T 4e5t_A 154 MAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAV-------GTKADLLFGTHGQFTVSGAKR 226 (404)
T ss_dssp HHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH-------GGGSEEEECCCSCBCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHc-------CCCCeEEEeCCCCcCHHHHHH
Confidence 5666555543 3589999999876431 111 1122344556777777765 347899999888888889999
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+++.+++.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.+
T Consensus 227 ~~~~l~~~~i~~iE---------e-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 278 (404)
T 4e5t_A 227 LARRLEAYDPLWFE---------E-----------------PIPPEKPEDMAEVARYT--SIPVATGERLCTKYEFSRVL 278 (404)
T ss_dssp HHHHHGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCcEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHH
Confidence 99999999988763 0 11222467788999998 79999999999999999999
Q ss_pred HhC-CCEEEEchhhhhcCCChHHHH
Q 012517 414 RAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.| +|+||+--+.. .|..-..+|
T Consensus 279 ~~~a~d~v~~d~~~~-GGit~~~~i 302 (404)
T 4e5t_A 279 ETGAASILQMNLGRV-GGLLEAKKI 302 (404)
T ss_dssp HHTCCSEECCCTTTS-SCHHHHHHH
T ss_pred HhCCCCEEecCcccc-CCHHHHHHH
Confidence 988 89999887663 354333333
No 189
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.34 E-value=0.00038 Score=66.95 Aligned_cols=90 Identities=14% Similarity=0.066 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++|+...+.|+|.+++..-.-.+ .| .+...++++++.+.+ .+||-.-|||+|.+|+
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a~----------------~~---~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~ 90 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGAK----------------DP---SKRQFALIEKLAKEV--SVNLQVGGGIRSKEEV 90 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHHH----------------CG---GGCCHHHHHHHHHHC--CSEEEEESSCCCHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEecCccc----------------cc---chhHHHHHHHHHHhc--CCCeEeccccccHHHH
Confidence 67788999999999999987432111 11 234678899999998 6999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.+.+++||+=|.+.|+.+. +|.++.++.+..
T Consensus 91 ~~~l~~GadkVii~t~a~~-~p~li~e~~~~~ 121 (243)
T 4gj1_A 91 KALLDCGVKRVVIGSMAIK-DATLCLEILKEF 121 (243)
T ss_dssp HHHHHTTCSEEEECTTTTT-CHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcccccc-CCchHHHHHhcc
Confidence 9999999999999999964 799988776543
No 190
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.34 E-value=0.0033 Score=64.95 Aligned_cols=144 Identities=15% Similarity=0.121 Sum_probs=102.1
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCC--Ccc-cccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTP--GLR-MLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~--glr-~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ 333 (462)
++++.++++. ..+..+-+++.+|... |.. ..++.+...+.+++|+++. +.+.+|+|.....++.++..+
T Consensus 147 ~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDaN~~~~~~~A~~ 219 (412)
T 4e4u_A 147 LAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAV-------GSKADLLFGTHGQMVPSSAIR 219 (412)
T ss_dssp HHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCCSCBCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHH
Confidence 5665555543 3589999998876431 110 1112344456677777665 457899999888888889999
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+++.+.+.|++.|- + |+.+...+..+++++.+ .+||++.+.+.+.+|+.+.+
T Consensus 220 ~~~~L~~~~i~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 271 (412)
T 4e4u_A 220 LAKRLEKYDPLWFE---------E-----------------PVPPGQEEAIAQVAKHT--SIPIATGERLTTKYEFHKLL 271 (412)
T ss_dssp HHHHHGGGCCSEEE---------C-----------------CSCSSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHH
T ss_pred HHHHhhhcCCcEEE---------C-----------------CCChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHH
Confidence 99999999988763 0 11222467788999988 79999999999999999999
Q ss_pred HhC-CCEEEEchhhhhcCCChHHHH
Q 012517 414 RAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.| +|+||+--+-. .|..-..+|
T Consensus 272 ~~~a~d~v~~d~~~~-GGit~~~ki 295 (412)
T 4e4u_A 272 QAGGASILQLNVARV-GGLLEAKKI 295 (412)
T ss_dssp HTTCCSEECCCTTTT-TSHHHHHHH
T ss_pred HcCCCCEEEeCcccc-CCHHHHHHH
Confidence 988 89999877663 343333333
No 191
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=97.33 E-value=0.0016 Score=66.35 Aligned_cols=144 Identities=13% Similarity=0.134 Sum_probs=102.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++. .+++ ++++.++++. ..++.+-+++.| +.+.-.+.+++|+++. +.+.+|+
T Consensus 136 ~~~~~~~~--~~~e---~~~~~a~~~~~~G~~~iKiK~G~----------~~~~d~~~v~avR~a~-------g~~~~l~ 193 (378)
T 3eez_A 136 PIASSVGA--KSVE---ETRAVIDRYRQRGYVAHSVKIGG----------DVERDIARIRDVEDIR-------EPGEIVL 193 (378)
T ss_dssp EBBCCBCS--CCHH---HHHHHHHHHHHTTCCEEEEECCS----------CHHHHHHHHHHHTTSC-------CTTCEEE
T ss_pred EEEEEecC--CCHH---HHHHHHHHHHhCCCCEEEeccCC----------CHHHHHHHHHHHHHHc-------CCCceEE
Confidence 34444543 2565 5555555543 358999999976 1233345666666542 3578999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|+....++.++..++++.+.+.|+ .|- . |+. ..+..+++++.+ ++||++
T Consensus 194 vDan~~~~~~~a~~~~~~l~~~~i-~iE-------q-------------------P~~--~~~~~~~l~~~~--~iPIa~ 242 (378)
T 3eez_A 194 YDVNRGWTRQQALRVMRATEDLHV-MFE-------Q-------------------PGE--TLDDIAAIRPLH--SAPVSV 242 (378)
T ss_dssp EECTTCCCHHHHHHHHHHTGGGTC-CEE-------C-------------------CSS--SHHHHHHTGGGC--CCCEEE
T ss_pred EECCCCCCHHHHHHHHHHhccCCe-EEe-------c-------------------CCC--CHHHHHHHHhhC--CCCEEE
Confidence 999888888888899999988876 441 1 111 346678888888 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHH
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
.+.+.+.+|+.++++.| +|.||+-.+.+ .|+.-..+|.
T Consensus 243 dE~~~~~~~~~~~l~~~~~d~v~ik~~~~-GGit~~~~ia 281 (378)
T 3eez_A 243 DECLVTLQDAARVARDGLAEVFGIKLNRV-GGLTRAARMR 281 (378)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEEeCchhc-CCHHHHHHHH
Confidence 99999999999999987 89999998874 5665555544
No 192
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=97.25 E-value=0.0025 Score=66.30 Aligned_cols=125 Identities=10% Similarity=-0.028 Sum_probs=94.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++.+ .++.+.+++.. +.+...+.+++|+++. +.+++|+|.....++.++..++++
T Consensus 201 ~~~~~a~~~~~~Gf~~vKik~g~----------~~~~d~e~v~avR~a~-------G~d~~l~vDan~~~~~~~a~~~~~ 263 (441)
T 2hxt_A 201 KLVRLAKEAVADGFRTIKLKVGA----------NVQDDIRRCRLARAAI-------GPDIAMAVDANQRWDVGPAIDWMR 263 (441)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCS----------CHHHHHHHHHHHHHHH-------CSSSEEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEccCC----------CHHHHHHHHHHHHHhc-------CCCCeEEEECCCCCCHHHHHHHHH
Confidence 67766666554 59999999863 1344567788888765 457899999887788888899999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- - |+.+...+..+++++.+. .+||++.+.+.+.+++.+.|+.|
T Consensus 264 ~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 316 (441)
T 2hxt_A 264 QLAEFDIAWIE-------E-------------------PTSPDDVLGHAAIRQGIT-PVPVSTGEHTQNRVVFKQLLQAG 316 (441)
T ss_dssp TTGGGCCSCEE-------C-------------------CSCTTCHHHHHHHHHHHT-TSCEEECTTCCSHHHHHHHHHHT
T ss_pred HHHhcCCCeee-------C-------------------CCCHHHHHHHHHHHhhCC-CCCEEEeCCcCCHHHHHHHHHcC
Confidence 99988888542 1 111224567788888873 49999999999999999999988
Q ss_pred -CCEEEEchhh
Q 012517 417 -ATLVQLYTAF 426 (462)
Q Consensus 417 -Ad~Vqv~Tal 426 (462)
+|+||+--.-
T Consensus 317 ~~d~v~ik~~~ 327 (441)
T 2hxt_A 317 AVDLIQIDAAR 327 (441)
T ss_dssp CCSEECCCTTT
T ss_pred CCCEEEeCcce
Confidence 8999986543
No 193
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=97.25 E-value=0.0032 Score=63.68 Aligned_cols=133 Identities=17% Similarity=0.070 Sum_probs=97.0
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
+..+++.. .+++ +|.+.++++.+ .++.+.+.++ | +...+++++|+++. +.+.+|.+
T Consensus 132 ~~~~~g~~-~~~~---~~~~~a~~~~~~Gf~~vKik~~-~-----------~~~~e~v~avr~~~-------g~~~~l~v 188 (368)
T 1sjd_A 132 CGVSVGIM-DTIP---QLLDVVGGYLDEGYVRIKLKIE-P-----------GWDVEPVRAVRERF-------GDDVLLQV 188 (368)
T ss_dssp BEEEECCC-SCHH---HHHHHHHHHHHHTCSEEEEECB-T-----------TBSHHHHHHHHHHH-------CTTSEEEE
T ss_pred ceEEeeCC-CCHH---HHHHHHHHHHHhCccEEEEecC-c-----------hhHHHHHHHHHHhc-------CCCceEEE
Confidence 34455431 1444 67666666544 5899999973 2 22347788888775 34688888
Q ss_pred EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe
Q 012517 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC 400 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~ 400 (462)
.....++.++ .++++.+.+.|++.|- + |+.+...+..+++++.+ ++||++.
T Consensus 189 Dan~~~~~~~-~~~~~~l~~~~i~~iE---------~-----------------P~~~~~~~~~~~l~~~~--~ipIa~d 239 (368)
T 1sjd_A 189 DANTAYTLGD-APQLARLDPFGLLLIE---------Q-----------------PLEEEDVLGHAELARRI--QTPICLD 239 (368)
T ss_dssp ECTTCCCGGG-HHHHHTTGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHTTC--SSCEEES
T ss_pred eccCCCCHHH-HHHHHHHHhcCCCeEe---------C-----------------CCChhhHHHHHHHHHhC--CCCEEEC
Confidence 8777778788 9999999999988652 1 11122467778888888 7999999
Q ss_pred cCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 401 GGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 401 GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+.+.+.+++.+.++.| +|+||+=-.-
T Consensus 240 E~~~~~~~~~~~i~~~~~d~v~ik~~~ 266 (368)
T 1sjd_A 240 ESIVSARAAADAIKLGAVQIVNIKPGR 266 (368)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEECTTT
T ss_pred CCcCCHHHHHHHHHcCCCCEEEecccc
Confidence 9999999999999988 8999995544
No 194
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.21 E-value=0.0024 Score=61.17 Aligned_cols=201 Identities=12% Similarity=0.024 Sum_probs=118.9
Q ss_pred CcEEeCCCCCCCHHHHHHHHcCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCc
Q 012517 137 NPLGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRK 216 (462)
Q Consensus 137 NPiglAAG~dk~~e~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~ 216 (462)
.|-.+|+=|..-.+.++.+.+.|.-++.+.-. .|.--|.+ .+| . .+++.|++..
T Consensus 17 ~psila~D~~~l~~~i~~~~~~gad~lhvDvm-----DG~fvpn~-----------t~G-----~-~~v~~lr~~~---- 70 (237)
T 3cu2_A 17 SVGILSANWLQLNEEVTTLLENQINVLHFDIA-----DGQFSSLF-----------TVG-----A-IGIKYFPTHC---- 70 (237)
T ss_dssp EEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEE-----BSSSSSCB-----------CBC-----T-HHHHTSCTTS----
T ss_pred EEeeeeCCcccHHHHHHHHHHcCCCEEEEEEe-----cCccccch-----------hhh-----H-HHHHHHhhhC----
Confidence 46667777777788899999999888765432 13221211 122 2 2333332210
Q ss_pred ccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHH
Q 012517 217 LDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKD 296 (462)
Q Consensus 217 ~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ 296 (462)
..-+-+.-+ .++ .|++.+..++ ||++.++.-+. +.+.+
T Consensus 71 ------------------------~~DvhLMv~--~p~---~~i~~~~~aG--Ad~itvH~ea~-----------~~~~~ 108 (237)
T 3cu2_A 71 ------------------------FKDVHLMVR--NQL---EVAKAVVANG--ANLVTLQLEQY-----------HDFAL 108 (237)
T ss_dssp ------------------------EEEEEEECS--CHH---HHHHHHHHTT--CSEEEEETTCT-----------TSHHH
T ss_pred ------------------------CCCeEEEEE--CHH---HHHHHHHHcC--CCEEEEecCCc-----------ccHHH
Confidence 113333322 354 7887777776 99999997542 12445
Q ss_pred HHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcC
Q 012517 297 LVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPL 376 (462)
Q Consensus 297 ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l 376 (462)
+++.+++...... ......-+.+=+.|....+.+..+. .++|.|.+- |. ..|+.|...
T Consensus 109 ~i~~i~~~~~~~~-~~~~g~~~gv~l~p~Tp~~~l~~~l-----~~~D~vlvM-sv---------------~pgfggq~f 166 (237)
T 3cu2_A 109 TIEWLAKQKTTYA-NQVYPVLIGACLCPETPISELEPYL-----DQIDVIQLL-TL---------------DPRNGTKYP 166 (237)
T ss_dssp HHHHHTTCEEEET-TEEEECEEEEEECTTSCGGGGTTTT-----TTCSEEEEE-SE---------------ETTTTEECC
T ss_pred HHHHHHhcccccc-cccCCceEEEEEeCCChHHHHHHHh-----hcCceeeee-ee---------------ccCcCCeec
Confidence 5555542100000 0000244666677765544444433 268866442 11 113344444
Q ss_pred ccchHHHHHHHHHhcCC---CccEEEecCCCCHHHHHHHHH--hCCCEEEEchhhhh
Q 012517 377 LSLSNNILKEMYLLTRG---KIPLIGCGGISSGEDAYRKIR--AGATLVQLYTAFAY 428 (462)
Q Consensus 377 ~~~al~~v~~i~~~~~~---~ipIIg~GGI~s~~dA~e~i~--aGAd~Vqv~Tali~ 428 (462)
.+..++.++++++..+. +++|..-|||+ .+.+.+.++ +|||.+-++|++..
T Consensus 167 ~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 167 SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 56678888888888742 58999999998 899999999 99999999999853
No 195
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.19 E-value=0.00019 Score=68.68 Aligned_cols=59 Identities=14% Similarity=-0.041 Sum_probs=49.6
Q ss_pred hHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 380 SNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 380 al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
..++++++++.++ ++|++.-|||+++++|.++.+ |||.|.++|+++. +|..+.++.+.+
T Consensus 173 ~~~~v~~ir~~~~-~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~-~~~~~~e~v~~v 231 (235)
T 3w01_A 173 DVSKVQAVSEHLT-ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK-DIKKALKTVKIK 231 (235)
T ss_dssp CHHHHHHHHTTCS-SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH-CHHHHHHTTCC-
T ss_pred CHHHHHHHHHhcC-CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec-CHHHHHHHHHHH
Confidence 4688999999874 699999999999999999887 9999999999964 787777665433
No 196
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=97.19 E-value=0.0032 Score=59.84 Aligned_cols=193 Identities=12% Similarity=0.118 Sum_probs=110.6
Q ss_pred CCcEEeCCCCCCCHHHHHHHHcCC--ccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhc
Q 012517 136 SNPLGLAAGFDKNAEAVEGLLGLG--FGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHG 213 (462)
Q Consensus 136 ~NPiglAAG~dk~~e~~~~l~~lG--fG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~ 213 (462)
.+++.+|.=+..-.+.++.+.++| ..++.+|.- +..++| .+ +.+.|++...
T Consensus 12 ~~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~---------------------lf~~~G-----~~-~v~~l~~~~g 64 (228)
T 3m47_A 12 MNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYP---------------------LVLSEG-----MD-IIAEFRKRFG 64 (228)
T ss_dssp GGGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHH---------------------HHHHHC-----TH-HHHHHHHHHC
T ss_pred CCCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHH---------------------HHHhcC-----HH-HHHHHHhcCC
Confidence 578999988877778888787777 677877651 112233 22 3344554211
Q ss_pred cCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchH
Q 012517 214 KRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQ 293 (462)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~ 293 (462)
..+...+--. .-++..+.|++.+-+++ +|++.+|..+. .+.
T Consensus 65 --------------------------~~v~lD~Kl~-DipnTv~~~~~~~~~~g--ad~vtvh~~~G----------~~~ 105 (228)
T 3m47_A 65 --------------------------CRIIADFKVA-DIPETNEKICRATFKAG--ADAIIVHGFPG----------ADS 105 (228)
T ss_dssp --------------------------CEEEEEEEEC-SCHHHHHHHHHHHHHTT--CSEEEEESTTC----------HHH
T ss_pred --------------------------CeEEEEEeec-ccHhHHHHHHHHHHhCC--CCEEEEeccCC----------HHH
Confidence 0222333111 23444557777666655 99999987541 133
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCC-CC---hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD-LS---KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETG 369 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd-l~---~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~G 369 (462)
+...++.+++. +..+.++..++.. .. .+....+++.+.+.|++|++++-|.
T Consensus 106 l~~~~~~~~~~--------g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~----------------- 160 (228)
T 3m47_A 106 VRACLNVAEEM--------GREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR----------------- 160 (228)
T ss_dssp HHHHHHHHHHH--------TCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSC-----------------
T ss_pred HHHHHHHHHhc--------CCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCC-----------------
Confidence 44555554432 1222333344432 11 1234678888899999999875431
Q ss_pred CCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-HHHHHHHHhCCCEEEEchhhhhcCCCh
Q 012517 370 GLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-EDAYRKIRAGATLVQLYTAFAYGGPAL 433 (462)
Q Consensus 370 GlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~dA~e~i~aGAd~Vqv~Tali~~GP~~ 433 (462)
.+.++++++.++.+++| .++||.-. .+. +.+++|||.+-++|++ ++.++.
T Consensus 161 -----------~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I-~~a~dp 211 (228)
T 3m47_A 161 -----------PERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSI-YLADNP 211 (228)
T ss_dssp -----------HHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHH-HTSSCH
T ss_pred -----------hHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHH-hCCCCH
Confidence 13467788888655665 77888632 267 8889999999999997 555553
No 197
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.17 E-value=0.00032 Score=65.16 Aligned_cols=48 Identities=25% Similarity=0.336 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCC
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGP 431 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP 431 (462)
++++++++.+ ++|||+.|+|.+.||+.+++++||++|..++.-+++|-
T Consensus 140 ~iI~~i~~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~~ 187 (192)
T 3kts_A 140 EQVQKMTQKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH 187 (192)
T ss_dssp HHHHHHHHHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTTC
T ss_pred HHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCcc
Confidence 7899999998 79999999999999999999999999999999998874
No 198
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.15 E-value=0.0093 Score=60.82 Aligned_cols=146 Identities=12% Similarity=0.119 Sum_probs=102.4
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHH-Hcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHT-LSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~-l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
+..+++.. +++ ++++.+++ +.. .+..+-+.+.++ +.+.-.+.+++|+++. +.+.+|+
T Consensus 140 ~~~t~~~~--~~~---~~~~~a~~~~~~~G~~~~K~Kvg~~---------~~~~d~~~v~avR~a~-------g~~~~l~ 198 (383)
T 3i4k_A 140 VTWALGVL--PLD---VAVAEIEERIEEFGNRSFKLKMGAG---------DPAEDTRRVAELAREV-------GDRVSLR 198 (383)
T ss_dssp BCEEECSC--CHH---HHHHHHHHHHHHHCCSEEEEECCSS---------CHHHHHHHHHHHHHTT-------TTTSEEE
T ss_pred EeEEeeCC--CHH---HHHHHHHHHHHhcCCcEEEEeeCCC---------CHHHHHHHHHHHHHHc-------CCCCEEE
Confidence 44455432 454 44443333 333 588999998653 2233456677777653 3468999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|+....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++
T Consensus 199 vDan~~~~~~~A~~~~~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~ 250 (383)
T 3i4k_A 199 IDINARWDRRTALHYLPILAEAGVELFE---------Q-----------------PTPADDLETLREITRRT--NVSVMA 250 (383)
T ss_dssp EECTTCSCHHHHHHHHHHHHHTTCCEEE---------S-----------------CSCTTCHHHHHHHHHHH--CCEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCChhhHHHHHHHHhhC--CCCEEe
Confidence 9998888888999999999999988763 1 11122456778899888 699999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
.+.+.+.+|+.+.++.| +|+||+--+-+ .|..-..+|
T Consensus 251 dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~i 288 (383)
T 3i4k_A 251 DESVWTPAEALAVVKAQAADVIALKTTKH-GGLLESKKI 288 (383)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECTTTT-TSHHHHHHH
T ss_pred cCccCCHHHHHHHHHcCCCCEEEEccccc-CCHHHHHHH
Confidence 99999999999999988 89999987663 454333333
No 199
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.14 E-value=0.015 Score=59.60 Aligned_cols=156 Identities=10% Similarity=-0.017 Sum_probs=105.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCC------------CCcccc---cCchHHHHHHHHHHHH
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNT------------PGLRML---QGRKQLKDLVKKVQAA 304 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt------------~glr~l---q~~~~l~~ll~aV~~~ 304 (462)
++..+++. .+++ ++++.++++. ..+..+-+.+.++.. +| ..+ +..+...+++++|+++
T Consensus 124 ~~y~~~~~--~~~e---~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~d~~~v~avR~a 197 (401)
T 3sbf_A 124 PVYTHATS--DTME---GIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEG-SYYDQDQYMDNTLTMFKSLREK 197 (401)
T ss_dssp EEEEEEEE--SSHH---HHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSS-EECCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCC--CCHH---HHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-ccccchHHHHHHHHHHHHHHHH
Confidence 34444443 2555 5555555543 468999999876421 11 001 1123445667777766
Q ss_pred HHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHH
Q 012517 305 RDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNIL 384 (462)
Q Consensus 305 ~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v 384 (462)
. +.+.+|+|.....++.++..++++.+.+.|++.|- + |+.+...+..
T Consensus 198 ~-------G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE---------q-----------------P~~~~~~~~~ 244 (401)
T 3sbf_A 198 Y-------GNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIE---------D-----------------ILPPNQTEWL 244 (401)
T ss_dssp H-------TTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE---------C-----------------SSCTTCGGGH
T ss_pred c-------CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCChhHHHHH
Confidence 5 45789999999888888999999999999887662 1 1111234456
Q ss_pred HHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHH
Q 012517 385 KEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 385 ~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
+++++.+ .+||++.+.+.+.+|+.++++.| +|+||+--+.. .|..-..+|.
T Consensus 245 ~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~kia 296 (401)
T 3sbf_A 245 DNIRSQS--SVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQI-GGITPALKLG 296 (401)
T ss_dssp HHHHTTC--CCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred HHHHhhC--CCCEEeCCccCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHHH
Confidence 7888888 69999999999999999999987 99999987764 4544344443
No 200
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.12 E-value=0.006 Score=59.91 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCCCCEEEEec---CCCChhh-HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccc
Q 012517 292 KQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA---PDLSKED-LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKE 367 (462)
Q Consensus 292 ~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis---pdl~~~~-~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~ 367 (462)
+.+.+-+++|++++. +..+|+= ..+++++ +...++.+.++|+|.|--+ |.+.
T Consensus 135 ~~V~~eI~~v~~a~~----------~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTS-TGf~------------- 190 (297)
T 4eiv_A 135 SRIRLLVSEVKKVVG----------PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTS-SGLG------------- 190 (297)
T ss_dssp HHHHHHHHHHHHHHT----------TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECC-CSSS-------------
T ss_pred HHHHHHHHHHHHHhc----------CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcC-CCCC-------------
Confidence 566777777777751 3467774 4466666 6889999999999998633 2211
Q ss_pred cCCCCCCcCccchHHHHHHHHHhc----------------------CCCccEEEe-cCCCCHHHHHHHHH
Q 012517 368 TGGLSGKPLLSLSNNILKEMYLLT----------------------RGKIPLIGC-GGISSGEDAYRKIR 414 (462)
Q Consensus 368 ~GGlSG~~l~~~al~~v~~i~~~~----------------------~~~ipIIg~-GGI~s~~dA~e~i~ 414 (462)
.+| .+++.++.+++.+ ++++-|=++ |||+|.+||.++|.
T Consensus 191 ~~g--------AT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 191 ATH--------ATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp SCC--------CCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHHH
T ss_pred CCC--------CCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHH
Confidence 111 1334444444443 467999999 99999999999999
No 201
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.11 E-value=0.0057 Score=57.97 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=85.1
Q ss_pred HHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecC-CCChhhHHHHHHHHHHcCC
Q 012517 265 TLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAP-DLSKEDLEDIAAVAVALRL 343 (462)
Q Consensus 265 ~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKisp-dl~~~~~~~ia~~~~~~Gv 343 (462)
.+.+. |++.+|-+..+ .+.+...++...+. +..+-++..++. +..+++...+++.+.++|+
T Consensus 75 ~~~~~-d~vTVh~~~G~---------~~~~~~a~~~~~~~--------~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~ 136 (222)
T 4dbe_A 75 RLSFA-NSFIAHSFIGV---------KGSLDELKRYLDAN--------SKNLYLVAVMSHEGWSTLFADYIKNVIREISP 136 (222)
T ss_dssp TCTTC-SEEEEESTTCT---------TTTHHHHHHHHHHT--------TCEEEEEEECSSTTCCCTTHHHHHHHHHHHCC
T ss_pred HHHhC-CEEEEEcCcCc---------HHHHHHHHHHHHhc--------CCcEEEEEeCCCcchHHHHHHHHHHHHHHhCC
Confidence 34444 99999865421 12233444433221 122334446653 3333455789999999999
Q ss_pred cEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-HHHHHHHHhCCCEEEE
Q 012517 344 DGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-EDAYRKIRAGATLVQL 422 (462)
Q Consensus 344 dgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~dA~e~i~aGAd~Vqv 422 (462)
||++++.|- -+.++.+|+.++ + .++.++||.-. .+..+.+++|||.+-+
T Consensus 137 ~GvV~sat~----------------------------p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVV 186 (222)
T 4dbe_A 137 KGIVVGGTK----------------------------LDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEII 186 (222)
T ss_dssp SEEEECTTC----------------------------HHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEE
T ss_pred CEEEECCCC----------------------------HHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEE
Confidence 999987542 134677888886 4 68889999732 1566777899999999
Q ss_pred chhhhh-cCC-ChHHHHHHHHHHHHHH
Q 012517 423 YTAFAY-GGP-ALIPQIKAELAECLER 447 (462)
Q Consensus 423 ~Tali~-~GP-~~i~~i~~~L~~~l~~ 447 (462)
++++.. .+| ...++|++++.+.+.+
T Consensus 187 GR~I~~A~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 187 GRSIYNAGNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp CHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 999964 233 2466777777765543
No 202
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.11 E-value=0.0079 Score=62.28 Aligned_cols=147 Identities=12% Similarity=0.062 Sum_probs=101.3
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCC--------------------Ccccc---cCchHHHH
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTP--------------------GLRML---QGRKQLKD 296 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~--------------------glr~l---q~~~~l~~ 296 (462)
++...++. .+++ ++++.++++. ..+..+-+.+..|+.+ +.... ++.+...+
T Consensus 140 ~~y~~~~~--~~~e---~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 214 (424)
T 3v3w_A 140 LSYTHANG--KDLD---STLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPD 214 (424)
T ss_dssp EEEEEEEE--SSHH---HHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHH
T ss_pred eEEEeCCC--CCHH---HHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 34444433 2555 5555555543 4689999988764311 00000 01234456
Q ss_pred HHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcC
Q 012517 297 LVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPL 376 (462)
Q Consensus 297 ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l 376 (462)
++++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|- .| +
T Consensus 215 ~v~avR~av-------G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-------------------~ 261 (424)
T 3v3w_A 215 VFAAVRKEF-------GPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DA-------------------V 261 (424)
T ss_dssp HHHHHHHHH-------CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-------------------S
T ss_pred HHHHHHHHc-------CCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-------------------C
Confidence 677777665 45789999998888988999999999999988763 11 1
Q ss_pred ccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 377 LSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 377 ~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
.+...+..+++++.+ .+||++.+.+.+.+|+.+.++.| +|+||+--+.+
T Consensus 262 ~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 311 (424)
T 3v3w_A 262 PAENQESFKLIRQHT--TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA 311 (424)
T ss_dssp CCSSTTHHHHHHHHC--CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred ChHhHHHHHHHHhhC--CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhc
Confidence 112345578888888 79999999999999999999988 89999876653
No 203
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=97.10 E-value=0.012 Score=59.26 Aligned_cols=137 Identities=14% Similarity=0.068 Sum_probs=100.0
Q ss_pred CHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhh
Q 012517 252 SEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~ 330 (462)
+++ ++.+.++++. ..+..+-+++.++ .+.-.+.+++|+++. +.+.+|+|.....++.++
T Consensus 139 ~~~---~~~~~a~~~~~~G~~~~K~K~g~~----------~~~d~~~v~avR~a~-------g~~~~l~vDan~~~~~~~ 198 (354)
T 3jva_A 139 EPN---VMAQKAVEKVKLGFDTLKIKVGTG----------IEADIARVKAIREAV-------GFDIKLRLDANQAWTPKD 198 (354)
T ss_dssp CHH---HHHHHHHHHHHTTCSEEEEECCSC----------HHHHHHHHHHHHHHH-------CTTSEEEEECTTCSCHHH
T ss_pred CHH---HHHHHHHHHHHhCCCeEEEEeCCC----------HHHHHHHHHHHHHHc-------CCCCeEEEECCCCCCHHH
Confidence 555 5555555443 4689999998652 133456777887765 457899999988888888
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++.+.+.+.+|+.
T Consensus 199 a~~~~~~L~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~ 250 (354)
T 3jva_A 199 AVKAIQALADYQIELVE---------Q-----------------PVKRRDLEGLKYVTSQV--NTTIMADESCFDAQDAL 250 (354)
T ss_dssp HHHHHHHTTTSCEEEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHH
T ss_pred HHHHHHHHHhcCCCEEE---------C-----------------CCChhhHHHHHHHHHhC--CCCEEEcCCcCCHHHHH
Confidence 88999999888877662 1 11122456778899988 79999999999999999
Q ss_pred HHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 411 RKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 411 e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.++.| +|.||+--..+ .|..-..++
T Consensus 251 ~~l~~~~~d~v~~k~~~~-GGit~~~~i 277 (354)
T 3jva_A 251 ELVKKGTVDVINIKLMKC-GGIHEALKI 277 (354)
T ss_dssp HHHHHTCCSEEEECHHHH-TSHHHHHHH
T ss_pred HHHHcCCCCEEEECchhc-CCHHHHHHH
Confidence 999987 89999987774 454433343
No 204
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=97.10 E-value=0.12 Score=52.88 Aligned_cols=233 Identities=16% Similarity=0.133 Sum_probs=135.3
Q ss_pred CCChHHHHHHHHHHHhc------CCCC------CCCCCCCCCccEEEcCeeeCC--cEEeCC--CCC-C--CHHHHHHHH
Q 012517 96 LLDAEVAHTLAVSAAAR------GWVP------REKRPDPAILGLEVWGRKFSN--PLGLAA--GFD-K--NAEAVEGLL 156 (462)
Q Consensus 96 ~~d~E~aH~~~~~~l~~------~~~p------~~~~~~~~~L~v~v~Gl~f~N--PiglAA--G~d-k--~~e~~~~l~ 156 (462)
-+|++...++-...++. ..+. +++.+ .+-.+++.|+.+-+ |+.+++ |.. . --+.++.+.
T Consensus 89 ~l~~~~i~~ifr~Ii~~s~~~Q~~~hsk~~l~sr~~~~--~~t~i~i~~~~iG~~~~~~Iigpcsves~e~a~~~a~~~k 166 (385)
T 3nvt_A 89 PFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKK--EDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIK 166 (385)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTSTTCCTTSCTTBTTTCC--SCCCEEETTEEETSSSCEEEEECSBCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcccccchhhhccccCC--CCcEEEECCEEECCCCeEEEEEeCCcCCHHHHHHHHHHHH
Confidence 46887777776555552 2221 22222 23356778877754 666665 442 1 225667788
Q ss_pred cCCccEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCC
Q 012517 157 GLGFGFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGK 236 (462)
Q Consensus 157 ~lGfG~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 236 (462)
+.|+-+|-.++..|+-. |--| -|+..+|+..+.+..++..
T Consensus 167 ~aGa~~vk~q~fkprts-----~~~f-----------~gl~~egl~~L~~~~~~~G------------------------ 206 (385)
T 3nvt_A 167 AKGLKLIRGGAFKPRTS-----PYDF-----------QGLGLEGLKILKRVSDEYG------------------------ 206 (385)
T ss_dssp HTTCCEEECBSSCCCSS-----TTSC-----------CCCTHHHHHHHHHHHHHHT------------------------
T ss_pred HcCCCeEEcccccCCCC-----hHhh-----------cCCCHHHHHHHHHHHHHcC------------------------
Confidence 99999998888754321 1111 1455566654444333221
Q ss_pred CCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCC
Q 012517 237 AGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP 316 (462)
Q Consensus 237 ~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 316 (462)
.++...+. +++ .++.+.+++|++-|. -+.+++. .+++++. ..++
T Consensus 207 ---l~~~te~~----d~~-------~~~~l~~~vd~lkIg--------s~~~~n~----~LL~~~a----------~~gk 250 (385)
T 3nvt_A 207 ---LGVISEIV----TPA-------DIEVALDYVDVIQIG--------ARNMQNF----ELLKAAG----------RVDK 250 (385)
T ss_dssp ---CEEEEECC----SGG-------GHHHHTTTCSEEEEC--------GGGTTCH----HHHHHHH----------TSSS
T ss_pred ---CEEEEecC----CHH-------HHHHHHhhCCEEEEC--------cccccCH----HHHHHHH----------ccCC
Confidence 14444443 222 133345568988774 2334443 4555543 2478
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecC-CccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNT-TISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNT-t~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
||++|-..+.+.+++...++.+.+.|.+-|++.-. +...+. .+.....+..+..+++.+ .+
T Consensus 251 PVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~----------------~~~~~ldl~~i~~lk~~~--~l 312 (385)
T 3nvt_A 251 PILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEK----------------ATRNTLDISAVPILKKET--HL 312 (385)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCC----------------SSSSBCCTTHHHHHHHHB--SS
T ss_pred cEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCC----------------CCccccCHHHHHHHHHhc--CC
Confidence 99999998888899999999999999877777643 211110 011223566677888887 68
Q ss_pred cEEEe----cCCCCH--HHHHHHHHhCCCEEEEch
Q 012517 396 PLIGC----GGISSG--EDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 396 pIIg~----GGI~s~--~dA~e~i~aGAd~Vqv~T 424 (462)
||+.- +|-... .-+...+.+||+.+.|=.
T Consensus 313 pV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 313 PVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp CEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred CEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 98553 222221 347788899999555543
No 205
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=97.09 E-value=0.0041 Score=63.77 Aligned_cols=124 Identities=15% Similarity=0.063 Sum_probs=93.7
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..++.+.+++.+ +.+.-.+.+++|+++. +.+.+|+|.....++.++..++++
T Consensus 158 ~~~~~a~~~~~~G~~~iKlK~g~----------~~~~d~~~v~avR~a~-------g~~~~l~vDaN~~~~~~~A~~~~~ 220 (392)
T 3ddm_A 158 NPEDVVARKAAEGYRAFKLKVGF----------DDARDVRNALHVRELL-------GAATPLMADANQGWDLPRARQMAQ 220 (392)
T ss_dssp SHHHHHHHHHHHTCCCEEEECSS----------CHHHHHHHHHHHHHHH-------CSSSCEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCC----------CHHHHHHHHHHHHHhc-------CCCceEEEeCCCCCCHHHHHHHHH
Confidence 4555555443 358999999864 2334456777887765 457899999988888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccch-HHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS-NNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~a-l~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
.+.+.|++.|- + |+.+.. .+..+++++.+ .+||++.+.+.+.+|+.++++.
T Consensus 221 ~L~~~~i~~iE---------e-----------------P~~~~d~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 272 (392)
T 3ddm_A 221 RLGPAQLDWLE---------E-----------------PLRADRPAAEWAELAQAA--PMPLAGGENIAGVAAFETALAA 272 (392)
T ss_dssp HHGGGCCSEEE---------C-----------------CSCTTSCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHH
T ss_pred HHHHhCCCEEE---------C-----------------CCCccchHHHHHHHHHhc--CCCEEeCCCCCCHHHHHHHHHc
Confidence 99999988763 1 111223 57778899988 7999999999999999999998
Q ss_pred C-CCEEEEchhh
Q 012517 416 G-ATLVQLYTAF 426 (462)
Q Consensus 416 G-Ad~Vqv~Tal 426 (462)
| +|+||+--.-
T Consensus 273 ~a~d~v~~k~~~ 284 (392)
T 3ddm_A 273 RSLRVMQPDLAK 284 (392)
T ss_dssp TCEEEECCCTTT
T ss_pred CCCCEEEeCcch
Confidence 7 8888886544
No 206
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.09 E-value=0.0089 Score=60.32 Aligned_cols=146 Identities=12% Similarity=0.136 Sum_probs=103.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++.. +++ ++++.++++. ..+..+-+++.+ +.+.-.+.+++|+++. +.+.+|+
T Consensus 131 ~~~~~~~~~--~~~---~~~~~a~~~~~~G~~~~K~K~G~----------~~~~d~~~v~avR~~~-------g~~~~l~ 188 (356)
T 3ro6_B 131 PTSVTIGIK--PVE---ETLAEAREHLALGFRVLKVKLCG----------DEEQDFERLRRLHETL-------AGRAVVR 188 (356)
T ss_dssp EBCEEECSC--CHH---HHHHHHHHHHHTTCCEEEEECCS----------CHHHHHHHHHHHHHHH-------TTSSEEE
T ss_pred eeeEEEcCC--CHH---HHHHHHHHHHHcCCCEEEEEeCC----------CHHHHHHHHHHHHHHh-------CCCCEEE
Confidence 345556542 555 5555555443 458999999864 2234456777787765 3578999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|+....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++
T Consensus 189 vDan~~~~~~~a~~~~~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~ 240 (356)
T 3ro6_B 189 VDPNQSYDRDGLLRLDRLVQELGIEFIE---------Q-----------------PFPAGRTDWLRALPKAI--RRRIAA 240 (356)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCCCEE---------C-----------------CSCTTCHHHHHTSCHHH--HHTEEE
T ss_pred EeCCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCCCCcHHHHHHHHhcC--CCCEEe
Confidence 9998888888999999999999888762 1 11122456677777777 699999
Q ss_pred ecCCCCHHHHHHHHHhC--CCEEEEchhhhhcCCChHHHH
Q 012517 400 CGGISSGEDAYRKIRAG--ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG--Ad~Vqv~Tali~~GP~~i~~i 437 (462)
.+-+.+.+|+.+.++.| +|.||+--+.+ .|..-..+|
T Consensus 241 dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i 279 (356)
T 3ro6_B 241 DESLLGPADAFALAAPPAACGIFNIKLMKC-GGLAPARRI 279 (356)
T ss_dssp STTCCSHHHHHHHHSSSCSCSEEEECHHHH-CSHHHHHHH
T ss_pred CCcCCCHHHHHHHHhcCCcCCEEEEccccc-CCHHHHHHH
Confidence 99999999999999975 99999987764 443333333
No 207
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.08 E-value=0.0078 Score=56.82 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=66.1
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
..||+.=+..+ +.++...+++++.+.|++.|-++.++. .+++.|+++++.++ +
T Consensus 12 ~~~vi~Vir~~-~~~~a~~~a~al~~gGi~~iEvt~~t~-------------------------~a~~~I~~l~~~~p-~ 64 (217)
T 3lab_A 12 TKPLIPVIVID-DLVHAIPMAKALVAGGVHLLEVTLRTE-------------------------AGLAAISAIKKAVP-E 64 (217)
T ss_dssp SCSEEEEECCS-CGGGHHHHHHHHHHTTCCEEEEETTST-------------------------THHHHHHHHHHHCT-T
T ss_pred hCCEEEEEEcC-CHHHHHHHHHHHHHcCCCEEEEeCCCc-------------------------cHHHHHHHHHHHCC-C
Confidence 34666656543 456899999999999999999986641 26789999999985 3
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
.+||.|-|.|.+|+.+.+++||+++..
T Consensus 65 -~~IGAGTVlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 65 -AIVGAGTVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp -SEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred -CeEeeccccCHHHHHHHHHcCCCEEEe
Confidence 799999999999999999999999843
No 208
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.07 E-value=0.015 Score=59.54 Aligned_cols=139 Identities=10% Similarity=-0.014 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHc-ccCcEEEEe-ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHH
Q 012517 256 AADYVQGVHTLS-QYADYLVIN-VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLE 332 (462)
Q Consensus 256 ~~dy~~~~~~l~-~~aD~leiN-vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~ 332 (462)
++++.+.++++. ..+..+-++ +..+ ..+.+.-.+++++|+++. +.+.+|+|.....+ +.++..
T Consensus 153 i~~~~~~a~~~~~~G~~~~K~~k~g~~-------~~~~~~d~~~v~avR~a~-------G~d~~l~vDan~~~~~~~~A~ 218 (394)
T 3mqt_A 153 VEAYKPLIAKAKERGAKAVKVCIIPND-------KVSDKEIVAYLRELREVI-------GWDMDMMVDCLYRWTDWQKAR 218 (394)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCT-------TSCHHHHHHHHHHHHHHH-------CSSSEEEEECTTCCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecccCCC-------ccCHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCCHHHHH
Confidence 446666666554 358888884 4311 122344567778887765 45789999998888 888889
Q ss_pred HHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHH
Q 012517 333 DIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRK 412 (462)
Q Consensus 333 ~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~ 412 (462)
++++.+.+.|++.|- . |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.
T Consensus 219 ~~~~~L~~~~i~~iE-------e-------------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~ 270 (394)
T 3mqt_A 219 WTFRQLEDIDLYFIE-------A-------------------CLQHDDLIGHQKLAAAI--NTRLCGAEMSTTRFEAQEW 270 (394)
T ss_dssp HHHHHTGGGCCSEEE-------S-------------------CSCTTCHHHHHHHHHHS--SSEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCeEEE-------C-------------------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHH
Confidence 999999999988763 1 11122456778999988 7999999999999999999
Q ss_pred HHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 413 IRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 413 i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
++.| +|+||+--+-. .|..-..+|
T Consensus 271 l~~~~~d~v~~k~~~~-GGit~~~~i 295 (394)
T 3mqt_A 271 LEKTGISVVQSDYNRC-GGVTELLRI 295 (394)
T ss_dssp HHHHCCSEECCCTTTS-SCHHHHHHH
T ss_pred HHcCCCCeEecCcccc-CCHHHHHHH
Confidence 9987 99999987763 454433343
No 209
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.06 E-value=0.014 Score=59.22 Aligned_cols=153 Identities=11% Similarity=0.111 Sum_probs=105.5
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE
Q 012517 243 GVNIGKNKTSEDAAADYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK 321 (462)
Q Consensus 243 gvnig~nk~t~~~~~dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK 321 (462)
...++.. +++ ++++.++++ ...+..+-+.+.+. .+.-.+.+++|+++. +.+.+|+|.
T Consensus 133 ~~~~~~~--~~e---~~~~~a~~~~~~G~~~~K~KvG~~----------~~~d~~~v~avR~~~-------g~~~~l~vD 190 (368)
T 3q45_A 133 DYTVSID--EPH---KMAADAVQIKKNGFEIIKVKVGGS----------KELDVERIRMIREAA-------GDSITLRID 190 (368)
T ss_dssp CEEECSC--CHH---HHHHHHHHHHHTTCSEEEEECCSC----------HHHHHHHHHHHHHHH-------CSSSEEEEE
T ss_pred EEEecCC--CHH---HHHHHHHHHHHcCCCeEEEEecCC----------HHHHHHHHHHHHHHh-------CCCCeEEEE
Confidence 3444432 555 555555544 34689999988541 233456777787765 457899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec
Q 012517 322 IAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG 401 (462)
Q Consensus 322 ispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G 401 (462)
....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++.+
T Consensus 191 aN~~~~~~~A~~~~~~l~~~~i~~iE---------q-----------------P~~~~~~~~~~~l~~~~--~iPIa~dE 242 (368)
T 3q45_A 191 ANQGWSVETAIETLTLLEPYNIQHCE---------E-----------------PVSRNLYTALPKIRQAC--RIPIMADE 242 (368)
T ss_dssp CTTCBCHHHHHHHHHHHGGGCCSCEE---------C-----------------CBCGGGGGGHHHHHHTC--SSCEEEST
T ss_pred CCCCCChHHHHHHHHHHhhcCCCEEE---------C-----------------CCChhHHHHHHHHHhhC--CCCEEEcC
Confidence 88778888888999999998887662 1 11222345567888888 79999999
Q ss_pred CCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCC
Q 012517 402 GISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQIKAELAECLERDGF 450 (462)
Q Consensus 402 GI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~ 450 (462)
.+.+.+|+.+.++.| +|+||+--+.. .|..-..+|. ++.+++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~----~~A~~~gi 287 (368)
T 3q45_A 243 SCCNSFDAERLIQIQACDSFNLKLSKS-AGITNALNII----RLAEQAHM 287 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTT-TSHHHHHHHH----HHHHHTTC
T ss_pred CcCCHHHHHHHHHcCCCCeEEechhhc-CCHHHHHHHH----HHHHHcCC
Confidence 999999999999987 89999987764 4543333332 34445554
No 210
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.06 E-value=0.0013 Score=64.42 Aligned_cols=79 Identities=20% Similarity=0.128 Sum_probs=54.9
Q ss_pred EEEEecCC---CChhh-HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc--
Q 012517 318 LLVKIAPD---LSKED-LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT-- 391 (462)
Q Consensus 318 v~vKispd---l~~~~-~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~-- 391 (462)
..+|+=-. +++++ +...++.+.++|+|.|-.+ |.+. .|| .+++.++.+++.+
T Consensus 157 ~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTS-TGf~-------------~~g--------AT~edv~lm~~~v~~ 214 (281)
T 2a4a_A 157 KILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTS-TGKV-------------QIN--------ATPSSVEYIIKAIKE 214 (281)
T ss_dssp SEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECC-CSCS-------------SCC--------CCHHHHHHHHHHHHH
T ss_pred CceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeC-CCCC-------------CCC--------CCHHHHHHHHHHHHH
Confidence 45666433 45556 6789999999999988633 3110 112 1334444444443
Q ss_pred --------CCCccEEEecCCCCHHHHHHHHHhCCC
Q 012517 392 --------RGKIPLIGCGGISSGEDAYRKIRAGAT 418 (462)
Q Consensus 392 --------~~~ipIIg~GGI~s~~dA~e~i~aGAd 418 (462)
+.+++|-++|||.|.+||++++++||+
T Consensus 215 ~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 215 YIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred hhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 678999999999999999999999876
No 211
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.04 E-value=0.0042 Score=64.40 Aligned_cols=138 Identities=12% Similarity=0.044 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHHHHHc-ccCcEEEEeccCCCC--------------------CCcccc---cCchHHHHHHHHHHHHHHh
Q 012517 252 SEDAAADYVQGVHTLS-QYADYLVINVSSPNT--------------------PGLRML---QGRKQLKDLVKKVQAARDE 307 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt--------------------~glr~l---q~~~~l~~ll~aV~~~~~~ 307 (462)
+++ ++++.++++. +.+..+-+.+..|.. |+.... ++.+...+++++|+++.
T Consensus 150 ~~e---~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~-- 224 (425)
T 3vcn_A 150 TIE---DTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL-- 224 (425)
T ss_dssp SHH---HHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH--
T ss_pred CHH---HHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc--
Confidence 555 5555555543 468999998876421 000000 00123456777787765
Q ss_pred hccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHH
Q 012517 308 MQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387 (462)
Q Consensus 308 ~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i 387 (462)
+.+.+|+|.....++.++..++++.+.+.|++.|- .| +.+...+..+++
T Consensus 225 -----G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-------------------~~~~d~~~~~~l 273 (425)
T 3vcn_A 225 -----GWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE-------DS-------------------VPAENQAGFRLI 273 (425)
T ss_dssp -----CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-------------------SCCSSTTHHHHH
T ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-------------------CChhhHHHHHHH
Confidence 45789999998888888999999999999988763 11 111234557888
Q ss_pred HHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 388 YLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 388 ~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
++.+ .+||++.+.+.+.+|+.++++.| +|+||+--+.+
T Consensus 274 ~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 312 (425)
T 3vcn_A 274 RQHT--TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHA 312 (425)
T ss_dssp HHHC--CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred HhcC--CCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhc
Confidence 8888 79999999999999999999988 89999876653
No 212
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.01 E-value=0.023 Score=55.43 Aligned_cols=170 Identities=15% Similarity=0.085 Sum_probs=95.4
Q ss_pred eEEEEecCCCCCH-HHHHHHHHHHHHHcccCcEEEEeccCCCCCCccc------cc-CchHHHHHHHHHHHHHHhhccCC
Q 012517 241 ILGVNIGKNKTSE-DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRM------LQ-GRKQLKDLVKKVQAARDEMQWGE 312 (462)
Q Consensus 241 ~lgvnig~nk~t~-~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~------lq-~~~~l~~ll~aV~~~~~~~~~~~ 312 (462)
||..++... +| .....|.+.++.++ +..+ +|+++ -|+-+ |+ .+--+.+.++.|+.+++.
T Consensus 96 PV~Agv~~~--DP~~~~g~~Le~lk~~G--f~Gv-~N~pt---vglidG~fr~~LEE~gm~~~~eve~I~~A~~~----- 162 (286)
T 2p10_A 96 PVLAGVNGT--DPFMVMSTFLRELKEIG--FAGV-QNFPT---VGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL----- 162 (286)
T ss_dssp CEEEEECTT--CTTCCHHHHHHHHHHHT--CCEE-EECSC---GGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT-----
T ss_pred CEEEEECCc--CCCcCHHHHHHHHHHhC--CceE-EECCC---cccccchhhhhHhhcCCCHHHHHHHHHHHHHC-----
Confidence 566666543 33 12457777777776 9999 99953 23332 22 122456777777776531
Q ss_pred CCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCC--cC-ccchHHHHHHHHH
Q 012517 313 EGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK--PL-LSLSNNILKEMYL 389 (462)
Q Consensus 313 ~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~--~l-~~~al~~v~~i~~ 389 (462)
+.--++=. .+. +-++++.++|+|.|++.-+. ..||+-|. ++ ...+.+.+.++.+
T Consensus 163 --gL~Ti~~v---~~~----eeA~amA~agpDiI~~h~gl--------------T~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 163 --DLLTTPYV---FSP----EDAVAMAKAGADILVCHMGL--------------TTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp --TCEECCEE---CSH----HHHHHHHHHTCSEEEEECSC--------------C---------CCCHHHHHHHHHHHHH
T ss_pred --CCeEEEec---CCH----HHHHHHHHcCCCEEEECCCC--------------CCCCcccCCCcccHHHhHHHHHHHHH
Confidence 21111111 222 33556678999999886432 12333332 11 1111233333332
Q ss_pred ---hcCCCcc-EEEecCCCCHHHHHHHHHh--CCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcC
Q 012517 390 ---LTRGKIP-LIGCGGISSGEDAYRKIRA--GATLVQLYTAFAYGGPALIPQIKAELAECLERDG 449 (462)
Q Consensus 390 ---~~~~~ip-IIg~GGI~s~~dA~e~i~a--GAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G 449 (462)
.+.+++. +.+.|||.+++|++..++. |++.+-..|++..- | +++..+++.+.++.-.
T Consensus 220 a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~-p--~e~ai~~~~~~fk~~~ 282 (286)
T 2p10_A 220 AARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL-P--AEEAIRSQTLAFKAIR 282 (286)
T ss_dssp HHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH-H--HHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC-C--HHHHHHHHHHHHHhcc
Confidence 2333544 4455599999999999999 99999999999753 5 6666666666555443
No 213
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=96.99 E-value=0.017 Score=59.70 Aligned_cols=155 Identities=10% Similarity=0.021 Sum_probs=105.3
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCC------------CCccccc---CchHHHHHHHHHHHH
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNT------------PGLRMLQ---GRKQLKDLVKKVQAA 304 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt------------~glr~lq---~~~~l~~ll~aV~~~ 304 (462)
++...++. .+++ ++++.++++. ..+..+-+.+..+.. +| .... ..+...+++++|+++
T Consensus 145 ~~y~~~~~--~~~e---~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~e~v~avR~a 218 (422)
T 3tji_A 145 PAYSHASG--ETLE---ALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPG-AWFDQQEYMSNTVEMFHALREK 218 (422)
T ss_dssp EEEEEEEE--SSHH---HHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSS-EECCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--CCHH---HHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-ccccchhHHHHHHHHHHHHHHH
Confidence 34444433 2555 5555555443 468999999875421 11 0011 123445666777666
Q ss_pred HHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHH
Q 012517 305 RDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNIL 384 (462)
Q Consensus 305 ~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v 384 (462)
. +.+.+|+|.....++.++..++++.+++.|++.|- + |+.+...+..
T Consensus 219 v-------G~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE---------q-----------------P~~~~d~~~~ 265 (422)
T 3tji_A 219 Y-------GWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIE---------D-----------------ILPPQQSAWL 265 (422)
T ss_dssp H-------CSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE---------C-----------------CSCGGGGGGH
T ss_pred c-------CCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE---------C-----------------CCChhhHHHH
Confidence 4 45789999998888888999999999999988763 1 1112234556
Q ss_pred HHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 385 KEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 385 ~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+++++.+ .+||++.+.+.+.+|+.++++.| +|+||+--+-. .|..-..+|
T Consensus 266 ~~l~~~~--~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~-GGit~~~ki 316 (422)
T 3tji_A 266 EQVRQQS--CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQI-GGITPALKL 316 (422)
T ss_dssp HHHHHHC--CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGG-TSHHHHHHH
T ss_pred HHHHhhC--CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHH
Confidence 7888888 79999999999999999999987 89999987764 454434343
No 214
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.99 E-value=0.019 Score=54.99 Aligned_cols=193 Identities=18% Similarity=0.206 Sum_probs=107.8
Q ss_pred eCCcEEeCCCCCCCHHHHHHHHcCCc--cEEEecccccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhh
Q 012517 135 FSNPLGLAAGFDKNAEAVEGLLGLGF--GFVEVGSVTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQH 212 (462)
Q Consensus 135 f~NPiglAAG~dk~~e~~~~l~~lGf--G~VevgtvT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~ 212 (462)
.++|+.+|+=|..-.+.++.+.++|. .++.++.-. +-+ .|.+ +.+.|++..
T Consensus 3 ~~~~lilalD~~~l~~~~~~v~~~~~~v~~~Kv~~d~---------------------~~~-----~G~~-~v~~lr~~~ 55 (246)
T 2yyu_A 3 MHTPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMEL---------------------YYQ-----EGPA-IVAFLKEQG 55 (246)
T ss_dssp --CCEEEECCCSSHHHHHHHHGGGTTSCCEEEECHHH---------------------HHH-----HTHH-HHHHHHHTT
T ss_pred CCCCeEEEeCCCCHHHHHHHHHHhcccccEEEeCHHH---------------------HHH-----hCHH-HHHHHHHCC
Confidence 45788999888777788888877773 555555421 122 3332 344555431
Q ss_pred ccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCch
Q 012517 213 GKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRK 292 (462)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~ 292 (462)
. +.++=+-++ ..++..+.|++.+..++ +|++.+|..+. .+
T Consensus 56 ~-------------------------~v~lD~kl~---Dip~t~~~~~~~~~~~G--ad~vTvH~~~g----------~~ 95 (246)
T 2yyu_A 56 H-------------------------AVFLDLKLH---DIPNTVKQAMKGLARVG--ADLVNVHAAGG----------RR 95 (246)
T ss_dssp C-------------------------EEEEEEEEC---SCHHHHHHHHHHHHHTT--CSEEEEEGGGC----------HH
T ss_pred C-------------------------eEEEEeecc---cchHHHHHHHHHHHhcC--CCEEEEECCCC----------HH
Confidence 1 012333333 23554456766666555 99999997541 13
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC--CChhhH-H----------HH---HHHHHHcCCcEEEEecCCccCC
Q 012517 293 QLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD--LSKEDL-E----------DI---AAVAVALRLDGLIISNTTISRP 356 (462)
Q Consensus 293 ~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd--l~~~~~-~----------~i---a~~~~~~GvdgIivsNTt~~r~ 356 (462)
.+.+.++.+++.. ..+.+.|.++=+.|- .+.+++ . .+ +....+.|.+|++.+
T Consensus 96 ~l~~~~~~~~~~~-----~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~------- 163 (246)
T 2yyu_A 96 MMEAAIEGLDAGT-----PSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS------- 163 (246)
T ss_dssp HHHHHHHHHHHHS-----CSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC-------
T ss_pred HHHHHHHHHHhhc-----ccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC-------
Confidence 3456666665421 012234633333332 222233 1 11 111345677776522
Q ss_pred CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-H---------HHHHHHHhCCCEEEEchhh
Q 012517 357 DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-E---------DAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 357 ~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~---------dA~e~i~aGAd~Vqv~Tal 426 (462)
+++ ++++++..+. .+|+..|||..- . .+.+.+++|||.+-++|++
T Consensus 164 -----------------------~~e-i~~lr~~~~~-~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I 218 (246)
T 2yyu_A 164 -----------------------ANE-AAFIKERCGA-SFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSL 218 (246)
T ss_dssp -----------------------HHH-HHHHHHHHCT-TSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHH
T ss_pred -----------------------HHH-HHHHHHhcCC-CCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhh
Confidence 234 6777777753 459999999732 1 3677789999999999998
Q ss_pred hhcCCC
Q 012517 427 AYGGPA 432 (462)
Q Consensus 427 i~~GP~ 432 (462)
.. .++
T Consensus 219 ~~-a~d 223 (246)
T 2yyu_A 219 TR-AAD 223 (246)
T ss_dssp HT-SSS
T ss_pred cC-CCC
Confidence 54 455
No 215
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.96 E-value=0.017 Score=57.23 Aligned_cols=84 Identities=13% Similarity=0.107 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-----
Q 012517 332 EDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG----- 406 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~----- 406 (462)
..+++.+.+.|+|||+++.+ + +..+|+.++.+ .++.++||.-.
T Consensus 161 ~~lA~~a~~~G~dGvV~s~~------------------------------E-~~~IR~~~~~~-fl~VTPGIr~qG~~~~ 208 (303)
T 3ru6_A 161 INFSKISYENGLDGMVCSVF------------------------------E-SKKIKEHTSSN-FLTLTPGIRPFGETND 208 (303)
T ss_dssp HHHHHHHHHTTCSEEECCTT------------------------------T-HHHHHHHSCTT-SEEEECCCCTTC----
T ss_pred HHHHHHHHHcCCCEEEECHH------------------------------H-HHHHHHhCCCc-cEEECCCcCcccCCcc
Confidence 45777788999999886321 1 35778888643 48889999721
Q ss_pred H-----HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcC
Q 012517 407 E-----DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDG 449 (462)
Q Consensus 407 ~-----dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G 449 (462)
+ .+.+.+++|||.+-++|++ ++.++- ....+.+.+.+.+.|
T Consensus 209 DQ~Rv~t~~~a~~aGAd~iVvGr~I-~~a~dp-~~a~~~i~~~i~~~~ 254 (303)
T 3ru6_A 209 DQKRVANLAMARENLSDYIVVGRPI-YKNENP-RAVCEKILNKIHRKN 254 (303)
T ss_dssp ----CCSHHHHHHTTCSEEEECHHH-HTSSCH-HHHHHHHHHHHC---
T ss_pred cccccCCHHHHHHcCCCEEEEChHH-hCCCCH-HHHHHHHHHHHHhcc
Confidence 1 3556778999999999998 444553 233344444444433
No 216
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=96.96 E-value=0.03 Score=57.13 Aligned_cols=137 Identities=11% Similarity=0.001 Sum_probs=100.2
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHH-cc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTL-SQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l-~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
++..+++- .+++ ++++.++++ .. .+..+-+.+..+. .+.-.+.+++|+++. +.+.+|
T Consensus 158 ~~y~s~g~--~~~e---~~~~~a~~~~~~~G~~~~KlKvG~~~---------~~~d~~~v~avR~a~-------G~~~~l 216 (383)
T 3toy_A 158 PAYDSYGV--LDAR---DDERTLRTACDEHGFRAIKSKGGHGD---------LATDEAMIKGLRALL-------GPDIAL 216 (383)
T ss_dssp EEEEECSS--CCHH---HHHHHHHHHHHTSCCCEEEEECCSSC---------HHHHHHHHHHHHHHH-------CTTSEE
T ss_pred EEeEecCC--CCHH---HHHHHHHHHHHccCCcEEEEecCCCC---------HHHHHHHHHHHHHHh-------CCCCeE
Confidence 46666554 2565 555544444 34 5889999886531 233346677777765 457899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 319 LVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 319 ~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
+|.....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||+
T Consensus 217 ~vDaN~~~~~~~A~~~~~~l~~~~i~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPIa 268 (383)
T 3toy_A 217 MLDFNQSLDPAEATRRIARLADYDLTWIE---------E-----------------PVPQENLSGHAAVRERS--EIPIQ 268 (383)
T ss_dssp EEECTTCSCHHHHHHHHHHHGGGCCSEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred EEeCCCCCCHHHHHHHHHHHHhhCCCEEE---------C-----------------CCCcchHHHHHHHHhhc--CCCEE
Confidence 99998888888989999999999988762 1 11222456778899988 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+...+.+.+|+.+.++.| +|.||+--.-
T Consensus 269 ~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 297 (383)
T 3toy_A 269 AGENWWFPRGFAEAIAAGASDFIMPDLMK 297 (383)
T ss_dssp ECTTCCHHHHHHHHHHHTCCSEECCCTTT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 999999999999999988 8999887655
No 217
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.91 E-value=0.0061 Score=57.48 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
..++.+++... ++||+.-|||.+++++..+...|||.|-++++++. +.-+.++.++|
T Consensus 159 ~~~~~ir~~~~-~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~--~~d~~~~~~~l 215 (219)
T 2h6r_A 159 GTVRAVKEINK-DVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK--AKNVEEAIREL 215 (219)
T ss_dssp HHHHHHHHHCT-TCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT--CSSHHHHHHHH
T ss_pred HHHHHHHhccC-CCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC--cccHHHHHHHH
Confidence 44455555543 79999999999999999999999999999999974 33344555544
No 218
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=96.88 E-value=0.014 Score=59.85 Aligned_cols=129 Identities=10% Similarity=0.002 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHc-ccCcEEEEe-ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHH
Q 012517 256 AADYVQGVHTLS-QYADYLVIN-VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLE 332 (462)
Q Consensus 256 ~~dy~~~~~~l~-~~aD~leiN-vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~ 332 (462)
++++.+.++++. ..+..+-++ +..+. .+.+.-.+.+++|+++. +.+.+|+|.....+ +.++..
T Consensus 158 ~~~~~~~a~~~~~~G~~~~K~~k~g~~~-------~~~~~d~e~v~avR~a~-------G~d~~l~vDaN~~~~~~~~A~ 223 (394)
T 3mkc_A 158 IKGYAPLLEKAKAHNIRAVKVCVPIKAD-------WSTKEVAYYLRELRGIL-------GHDTDMMVDYLYRFTDWYEVA 223 (394)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCC-------CCHHHHHHHHHHHHHHH-------CSSSEEEEECTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccCCCc-------cCHHHHHHHHHHHHHHh-------CCCCeEEEeCCCCCCCHHHHH
Confidence 345666666554 358888884 43210 12344557778887765 45789999988888 888889
Q ss_pred HHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHH
Q 012517 333 DIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRK 412 (462)
Q Consensus 333 ~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~ 412 (462)
++++.+.+.|++.|- . |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.
T Consensus 224 ~~~~~L~~~~i~~iE-------e-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~ 275 (394)
T 3mkc_A 224 RLLNSIEDLELYFAE-------A-------------------TLQHDDLSGHAKLVENT--RSRICGAEMSTTRFEAEEW 275 (394)
T ss_dssp HHHHHTGGGCCSEEE-------S-------------------CSCTTCHHHHHHHHHHC--SSCBEECTTCCHHHHHHHH
T ss_pred HHHHHhhhcCCeEEE-------C-------------------CCCchhHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHH
Confidence 999999999988763 1 11122456778899988 7999999999999999999
Q ss_pred HHhC-CCEEEEchhh
Q 012517 413 IRAG-ATLVQLYTAF 426 (462)
Q Consensus 413 i~aG-Ad~Vqv~Tal 426 (462)
++.| +|+||+--+-
T Consensus 276 l~~~~~d~v~~k~~~ 290 (394)
T 3mkc_A 276 ITKGKVHLLQSDYNR 290 (394)
T ss_dssp HHTTCCSEECCCTTT
T ss_pred HHcCCCCeEecCccc
Confidence 9987 8999987665
No 219
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=96.87 E-value=0.0081 Score=57.54 Aligned_cols=47 Identities=9% Similarity=0.008 Sum_probs=35.8
Q ss_pred HHHHHHhcCCCccEEEecCCCCHH----------HHHHHHHhCCCEEEEchhhhhcCCC
Q 012517 384 LKEMYLLTRGKIPLIGCGGISSGE----------DAYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 384 v~~i~~~~~~~ipIIg~GGI~s~~----------dA~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
++++++..+ +.+|+..|||..-- .+.+.+++|||.+-++|++. +.++
T Consensus 173 i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~-~a~d 229 (245)
T 1eix_A 173 AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVT-QSVD 229 (245)
T ss_dssp HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHH-TSSS
T ss_pred HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHc-CCCC
Confidence 566777765 46899999998320 46677899999999999985 4555
No 220
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=96.87 E-value=0.023 Score=58.16 Aligned_cols=126 Identities=13% Similarity=0.044 Sum_probs=95.0
Q ss_pred HHHHHHHHH-cc---cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHH
Q 012517 258 DYVQGVHTL-SQ---YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l-~~---~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ 333 (462)
++++.+++. .. .+..+-+.+..+. .+.-.+.+++|+++. +.+.+|+|.....++.++..+
T Consensus 174 ~~~~~a~~~~~~~~~G~~~iKlKvG~~~---------~~~d~~~v~avR~a~-------G~~~~l~vDaN~~~~~~~A~~ 237 (390)
T 3ugv_A 174 VAAEAVELKAEGQGTGFKGLKLRMGRDD---------PAVDIETAEAVWDAV-------GRDTALMVDFNQGLDMAEAMH 237 (390)
T ss_dssp HHHHHHHHHHTTCTTCCSEEEEECCCSS---------HHHHHHHHHHHHHHH-------CTTSEEEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHhhhCCCcEEEEecCCCC---------HHHHHHHHHHHHHHh-------CCCCEEEEECCCCCCHHHHHH
Confidence 555555544 44 5888999886532 233356777777765 457899999988888888899
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+++.+.+.|++.|- + |+.+...+..+++++.+ .+||++...+.+.+|+.+.+
T Consensus 238 ~~~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 289 (390)
T 3ugv_A 238 RTRQIDDLGLEWIE---------E-----------------PVVYDNFDGYAQLRHDL--KTPLMIGENFYGPREMHQAL 289 (390)
T ss_dssp HHHHHTTSCCSEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHH
T ss_pred HHHHHHhhCCCEEE---------C-----------------CCCcccHHHHHHHHHhc--CCCEEeCCCcCCHHHHHHHH
Confidence 99999999887762 1 11222456778899988 69999999999999999999
Q ss_pred HhC-CCEEEEchhhh
Q 012517 414 RAG-ATLVQLYTAFA 427 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tali 427 (462)
+.| +|.||+--+-.
T Consensus 290 ~~~a~d~v~ik~~~~ 304 (390)
T 3ugv_A 290 QAGACDLVMPDFMRI 304 (390)
T ss_dssp HTTCCSEECCBHHHH
T ss_pred HcCCCCEEEeCcccc
Confidence 987 89999877663
No 221
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=96.85 E-value=0.058 Score=54.48 Aligned_cols=146 Identities=14% Similarity=0.072 Sum_probs=102.4
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHH-cc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTL-SQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l-~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
++...++.. +++ ++++.++++ .. .+..+-+.+... + .+.-.+.+++|+++. +.+.+|
T Consensus 130 ~~~~~~~~~--~~~---~~~~~a~~~~~~~G~~~~K~K~g~~--~-------~~~d~~~v~avR~a~-------g~~~~l 188 (367)
T 3dg3_A 130 RVSHMLGFD--DPV---KMVAEAERIRETYGINTFKVKVGRR--P-------VQLDTAVVRALRERF-------GDAIEL 188 (367)
T ss_dssp EEEEEEESS--CHH---HHHHHHHHHHHHHCCCEEEEECCCS--S-------THHHHHHHHHHHHHH-------GGGSEE
T ss_pred EEEEEecCC--CHH---HHHHHHHHHHHhcCccEEEEeeCCC--h-------hhhHHHHHHHHHHHh-------CCCCEE
Confidence 455666542 555 444444443 33 588899888541 0 012346778888775 347899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 319 LVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 319 ~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
+|.....++.++..++++.+.+.|++.|- . |+.+...+..+++++.+ .+||+
T Consensus 189 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~iPIa 240 (367)
T 3dg3_A 189 YVDGNRGWSAAESLRAMREMADLDLLFAE-------E-------------------LCPADDVLSRRRLVGQL--DMPFI 240 (367)
T ss_dssp EEECTTCSCHHHHHHHHHHTTTSCCSCEE-------S-------------------CSCTTSHHHHHHHHHHC--SSCEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHhCCCEEE-------C-------------------CCCcccHHHHHHHHHhC--CCCEE
Confidence 99988888888888999999998877652 1 11222456778899988 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.+.+.+.+|+.+.++.| +|+||+=-.-. |..-..+|
T Consensus 241 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~--Git~~~~i 278 (367)
T 3dg3_A 241 ADESVPTPADVTREVLGGSATAISIKTART--GFTGSTRV 278 (367)
T ss_dssp ECTTCSSHHHHHHHHHHTSCSEEEECHHHH--TTHHHHHH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEeehhhh--hHHHHHHH
Confidence 999999999999999988 89999977664 54434443
No 222
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.85 E-value=0.086 Score=53.17 Aligned_cols=95 Identities=15% Similarity=0.061 Sum_probs=64.6
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
.++||++|-..+.+.+++...++.+...|.+-++++..-. + .+.+.+.....+..+..+++..
T Consensus 212 ~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~-~--------------typ~~~~~~vdl~ai~~lk~~~-- 274 (350)
T 1vr6_A 212 YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGI-R--------------TFEKATRNTLDISAVPIIRKES-- 274 (350)
T ss_dssp TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCB-C--------------CSCCSSSSBCCTTHHHHHHHHB--
T ss_pred cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCC-C--------------CCCCcChhhhhHHHHHHHHHhh--
Confidence 3789999999888888999999999999986677652110 0 0011112234566777888887
Q ss_pred CccEEE-ec---CCCC--HHHHHHHHHhCCCEEEEchh
Q 012517 394 KIPLIG-CG---GISS--GEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 394 ~ipIIg-~G---GI~s--~~dA~e~i~aGAd~Vqv~Ta 425 (462)
.+||++ +. |-.+ .+-+...+.+||+.+++=+-
T Consensus 275 ~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H 312 (350)
T 1vr6_A 275 HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVH 312 (350)
T ss_dssp SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBC
T ss_pred CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEec
Confidence 689877 33 5433 56677788999996666544
No 223
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=96.80 E-value=0.018 Score=59.17 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=94.6
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCC-------Ccc-----cc-cC---chHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTP-------GLR-----ML-QG---RKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~-------glr-----~l-q~---~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
++.+.++++. ..+..+-+.+..+..+ |.. +. .+ .+...+.+++|+++. +.+.+|+|
T Consensus 146 ~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~av-------G~d~~l~v 218 (409)
T 3go2_A 146 GVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGA-------GPDVEILL 218 (409)
T ss_dssp HHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHH-------CTTSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHh-------CCCCEEEE
Confidence 5565555543 4589999988332211 111 00 01 133456677776665 45789999
Q ss_pred EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe
Q 012517 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC 400 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~ 400 (462)
.....++.++..++++.+.+.|++.|-. | . ...+..+++++.+ .+||++.
T Consensus 219 DaN~~~~~~~A~~~~~~L~~~~i~~iE~-------P-------------------~--~d~~~~~~l~~~~--~iPIa~d 268 (409)
T 3go2_A 219 DLNFNAKPEGYLKILRELADFDLFWVEI-------D-------------------S--YSPQGLAYVRNHS--PHPISSC 268 (409)
T ss_dssp ECTTCSCHHHHHHHHHHTTTSCCSEEEC-------C-------------------C--SCHHHHHHHHHTC--SSCEEEC
T ss_pred ECCCCCCHHHHHHHHHHHhhcCCeEEEe-------C-------------------c--CCHHHHHHHHhhC--CCCEEeC
Confidence 9988888888899999999999887741 1 0 1356678899988 7999999
Q ss_pred cCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 401 GGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 401 GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+.+.+.+|+.+.++.| +|+||+--.-
T Consensus 269 E~~~~~~~~~~~i~~~~~d~v~~k~~~ 295 (409)
T 3go2_A 269 ETLFGIREFKPFFDANAVDVAIVDTIW 295 (409)
T ss_dssp TTCCHHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCcCCHHHHHHHHHhCCCCEEEeCCCC
Confidence 9999999999999988 8999997754
No 224
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.79 E-value=0.031 Score=53.19 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=40.4
Q ss_pred HHHHHHhcCCCccEEEecCCCCHHH----------HHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHH
Q 012517 384 LKEMYLLTRGKIPLIGCGGISSGED----------AYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECL 445 (462)
Q Consensus 384 v~~i~~~~~~~ipIIg~GGI~s~~d----------A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l 445 (462)
++++++..+ ..+|+..|||..-.. ..+.+++|||.+-++|++.. .++ +.+..+.+.+.+
T Consensus 166 i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~-a~d-p~~a~~~l~~~i 234 (239)
T 1dbt_A 166 AKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITK-AED-PVKAYKAVRLEW 234 (239)
T ss_dssp HHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHT-SSC-HHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcC-CCC-HHHHHHHHHHHH
Confidence 456677664 568999999974322 26778999999999999854 566 334444444433
No 225
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.78 E-value=0.057 Score=55.10 Aligned_cols=218 Identities=12% Similarity=0.128 Sum_probs=132.1
Q ss_pred cEEEcCeee---CCcEEeC-CCCCCCH--H----HHHHHHcCCccEEEecccccCCCCCCCCCceeeecC--C---Cccc
Q 012517 127 GLEVWGRKF---SNPLGLA-AGFDKNA--E----AVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLRQ--E---GAII 191 (462)
Q Consensus 127 ~v~v~Gl~f---~NPiglA-AG~dk~~--e----~~~~l~~lGfG~VevgtvT~~pq~GNp~PR~frl~~--d---~a~i 191 (462)
..++.+..+ ..|+.+| .|..-+| + .++...+.|+-+|=.++.+++--- .|.-.-|..+. . ..+.
T Consensus 15 ~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~-s~~~~~fq~~~~~~~~~ye~~ 93 (385)
T 1vli_A 15 AFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMY-QKDPGLYKTAAGKDVSIFSLV 93 (385)
T ss_dssp EEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGT-SCCC---------CCCHHHHG
T ss_pred heeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCccc-CcchhhhccCCCCCccHHHHH
Confidence 455677777 4688888 3543333 3 566677889999998888874310 00001122211 0 0245
Q ss_pred ccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHccc-C
Q 012517 192 NRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQY-A 270 (462)
Q Consensus 192 N~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~-a 270 (462)
..++|+-+++..+.+..++.. +..++ ...+++ .++.+.++ +
T Consensus 94 ~~~~l~~e~~~~L~~~~~~~G----------------------------i~~~s---tpfD~~-------svd~l~~~~v 135 (385)
T 1vli_A 94 QSMEMPAEWILPLLDYCREKQ----------------------------VIFLS---TVCDEG-------SADLLQSTSP 135 (385)
T ss_dssp GGBSSCGGGHHHHHHHHHHTT----------------------------CEEEC---BCCSHH-------HHHHHHTTCC
T ss_pred HhcCCCHHHHHHHHHHHHHcC----------------------------CcEEE---ccCCHH-------HHHHHHhcCC
Confidence 677888888877777665431 22121 112333 23334444 7
Q ss_pred cEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEec
Q 012517 271 DYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISN 350 (462)
Q Consensus 271 D~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsN 350 (462)
|++-| . -++++|-. ||++|-+ .++||++|--.. +.+|+...++.+.+.|.+-|++.-
T Consensus 136 d~~KI--g------S~~~~N~p----LL~~va~----------~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 136 SAFKI--A------SYEINHLP----LLKYVAR----------LNRPMIFSTAGA-EISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp SCEEE--C------GGGTTCHH----HHHHHHT----------TCSCEEEECTTC-CHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CEEEE--C------cccccCHH----HHHHHHh----------cCCeEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEEe
Confidence 88776 2 24555544 4445432 478999999875 888999999999999985555533
Q ss_pred CCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC-HHHHHHHHHhCCCEEEEch
Q 012517 351 TTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS-GEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 351 Tt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s-~~dA~e~i~aGAd~Vqv~T 424 (462)
++...+ . |.....+..|..+++.++ .+||.-++=-.. ..-+...+.+||++|...=
T Consensus 193 c~s~YP----t-------------p~~~~nL~aI~~Lk~~f~-~lpVG~SdHt~G~~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 193 CVAKYP----A-------------PPEYSNLSVIPMLAAAFP-EAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp ECSSSS----C-------------CGGGCCTTHHHHHHHHST-TSEEEEEECCSSSSHHHHHHHHTTCSEEEEEB
T ss_pred ccCCCC----C-------------ChhhcCHHHHHHHHHHcC-CCCEEeCCCCCCchHHHHHHHHcCCCEEEeCC
Confidence 321111 1 112346778888888874 489877765555 7888899999999998763
No 226
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=96.75 E-value=0.019 Score=58.28 Aligned_cols=125 Identities=15% Similarity=0.053 Sum_probs=92.2
Q ss_pred HHHHHHHHH-cc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTL-SQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l-~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++++.+++. .. .+..+-+.+.+|. .+.-.+.+++|+++. +.+.+|+|.....++.++..+++
T Consensus 154 ~~~~~a~~~~~~~G~~~~K~Kvg~~~---------~~~d~~~v~avR~~~-------g~~~~l~vDan~~~~~~~a~~~~ 217 (372)
T 3tj4_A 154 DLLAGSARAVEEDGFTRLKIKVGHDD---------PNIDIARLTAVRERV-------DSAVRIAIDGNGKWDLPTCQRFC 217 (372)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCCSS---------HHHHHHHHHHHHHHS-------CTTCEEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCEEEEcCCCCC---------HHHHHHHHHHHHHHc-------CCCCcEEeeCCCCCCHHHHHHHH
Confidence 445444443 34 5899999987642 223356677777654 45789999998888888888999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
+.+.+.|++.|- . |+.+...+..+++++.+ .+||++...+.+.+|+.+.++.
T Consensus 218 ~~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 269 (372)
T 3tj4_A 218 AAAKDLDIYWFE-------E-------------------PLWYDDVTSHARLARNT--SIPIALGEQLYTVDAFRSFIDA 269 (372)
T ss_dssp HHTTTSCEEEEE-------S-------------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred HHHhhcCCCEEE-------C-------------------CCCchhHHHHHHHHhhc--CCCEEeCCCccCHHHHHHHHHc
Confidence 998888766552 1 11222467778899988 7999999999999999999998
Q ss_pred C-CCEEEEchhh
Q 012517 416 G-ATLVQLYTAF 426 (462)
Q Consensus 416 G-Ad~Vqv~Tal 426 (462)
| +|.||+--.-
T Consensus 270 ~~~d~v~~k~~~ 281 (372)
T 3tj4_A 270 GAVAYVQPDVTR 281 (372)
T ss_dssp TCCSEECCCTTT
T ss_pred CCCCEEEeCccc
Confidence 7 8999886554
No 227
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=96.72 E-value=0.09 Score=53.67 Aligned_cols=131 Identities=10% Similarity=0.020 Sum_probs=97.0
Q ss_pred ccCcEEEEeccCCCCCCcccc-cCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEE
Q 012517 268 QYADYLVINVSSPNTPGLRML-QGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGL 346 (462)
Q Consensus 268 ~~aD~leiNvSsPnt~glr~l-q~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgI 346 (462)
..+..+-+.+..+... +. +.++...+.+++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|
T Consensus 161 ~Gf~~~K~KvG~~~~~---d~~~~~~~~~~~v~avReav-------G~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i 230 (388)
T 3tcs_A 161 QGFTAFKVRAGAEVGR---NRDEWPGRTEEIIPTMRREL-------GDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHF 230 (388)
T ss_dssp HCCCEEEEECSCTTCT---TCCSSTTHHHHHHHHHHHHH-------CSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cCCCEEEEccCCCccc---ccccchhHHHHHHHHHHHHh-------CCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEE
Confidence 4589999999765321 11 12344567788888775 4578999999988998899999999999998765
Q ss_pred EEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchh
Q 012517 347 IISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTA 425 (462)
Q Consensus 347 ivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Ta 425 (462)
- . |+.+-..+..+++++.+ .+||++...+.+.+|+.++++.| +|.||+--+
T Consensus 231 E-------e-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 231 E-------E-------------------PCPYWELAQTKQVTDAL--DIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp E-------C-------------------CSCTTCHHHHHHHHHHC--SSCEEECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred E-------C-------------------CCCccCHHHHHHHHHhc--CCCEEcCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 2 1 11122456778899988 69999999999999999999987 899998776
Q ss_pred hhhcCCChHHHH
Q 012517 426 FAYGGPALIPQI 437 (462)
Q Consensus 426 li~~GP~~i~~i 437 (462)
-. .|..-..+|
T Consensus 283 ~~-GGit~a~ki 293 (388)
T 3tcs_A 283 YL-GGICRTLRV 293 (388)
T ss_dssp HH-TSHHHHHHH
T ss_pred cc-CCHHHHHHH
Confidence 63 354333343
No 228
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.72 E-value=0.26 Score=48.06 Aligned_cols=94 Identities=17% Similarity=0.064 Sum_probs=65.6
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEec-CCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISN-TTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsN-Tt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
++||++|-..+.+.+++...++.+...|.+-|++.- .+... .+.+.....+..+..+++..
T Consensus 145 ~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~y----------------p~y~~~~vdl~~i~~lk~~~-- 206 (276)
T 1vs1_A 145 GKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTF----------------EPSTRFTLDVAAVAVLKEAT-- 206 (276)
T ss_dssp TCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCS----------------CCSSSSBCBHHHHHHHHHHB--
T ss_pred CCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCC----------------CCcCcchhCHHHHHHHHHHh--
Confidence 689999999888888999999999999986566543 21111 11122345677788888887
Q ss_pred CccEEE-ec---CCCC--HHHHHHHHHhCCCEEEEchhh
Q 012517 394 KIPLIG-CG---GISS--GEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 394 ~ipIIg-~G---GI~s--~~dA~e~i~aGAd~Vqv~Tal 426 (462)
.+||++ +. |..+ .+-+...+.+||+.++|=+-+
T Consensus 207 ~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 207 HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 689876 33 5443 566777889999966665543
No 229
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=96.71 E-value=0.021 Score=57.82 Aligned_cols=126 Identities=10% Similarity=0.074 Sum_probs=93.3
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.++.+.+. ..+..+-+.+... +.+.-.+.+++|+++. +.+.+|+|.....++.++..++++
T Consensus 146 ~~~~~~~~~~~~G~~~~KiKvg~~---------~~~~d~~~v~avR~~~-------g~~~~l~vDan~~~~~~~a~~~~~ 209 (370)
T 1chr_A 146 DLDSAVEMIERRRHNRFKVKLGFR---------SPQDDLIHMEALSNSL-------GSKAYLRVDVNQAWDEQVASVYIP 209 (370)
T ss_dssp HHHHHHHHHHTTCCCEEEEECSSS---------CSHHHHHHHHHHHHHS-------STTCCEEEECTTCCCTTHHHHHTH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCC---------CHHHHHHHHHHHHHhc-------CCCCEEEEECCCCCCHHHHHHHHH
Confidence 4444555554 4588889888642 1233356677777664 346899999888888889999999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- + |+.+...+..+++++.+ .+||++..-+.+.+|+.+.++.|
T Consensus 210 ~l~~~~i~~iE---------q-----------------P~~~~~~~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~~~ 261 (370)
T 1chr_A 210 ELEALGVELIE---------Q-----------------PVGRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARDR 261 (370)
T ss_dssp HHHTTTEEEEE---------C-----------------CSCTTCHHHHHHHHHHS--CSEEEESSSCCSHHHHHHHHTTT
T ss_pred HHHhcCCCEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcC
Confidence 99998877652 1 11222456778899988 79999999999999999999987
Q ss_pred -CCEEEEchhhh
Q 012517 417 -ATLVQLYTAFA 427 (462)
Q Consensus 417 -Ad~Vqv~Tali 427 (462)
+|.||+--+-.
T Consensus 262 ~~d~v~~k~~~~ 273 (370)
T 1chr_A 262 SVDVFSLKLCNM 273 (370)
T ss_dssp SCSEEEECTTTS
T ss_pred CCCEEEECcccc
Confidence 99999977663
No 230
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=96.66 E-value=0.0047 Score=63.17 Aligned_cols=132 Identities=8% Similarity=0.054 Sum_probs=92.3
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++|.+.++++.+ .++.+.+.+.-.... +-+.++.+...+++++|+++. +.+.+|+|.....++.++..+++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~-~~~~~~~~~~~e~v~avR~~~-------g~d~~l~vDan~~~~~~~ai~~~ 221 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRH-MPLWEGTKRDIAIVRGISEVA-------GPAGKIMIDANNAYNLNLTKEVL 221 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHT-SCHHHHHHHHHHHHHHHHHHH-------CTTCCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCccc-CCccccHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHH
Confidence 477777766644 589999986421000 001112244556777777664 45789999887778888888999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh-----cCCCccEEEecCCCCHHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL-----TRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~-----~~~~ipIIg~GGI~s~~dA~ 410 (462)
+.+.+.|++.|- + |+. ...+..+++++. + ++||++.+ +.+.+++.
T Consensus 222 ~~l~~~~i~~iE---------~-----------------P~~-~d~~~~~~l~~~l~~~g~--~iPIa~dE-~~~~~~~~ 271 (392)
T 3p3b_A 222 AALSDVNLYWLE---------E-----------------AFH-EDEALYEDLKEWLGQRGQ--NVLIADGE-GLASPHLI 271 (392)
T ss_dssp HHTTTSCEEEEE---------C-----------------SSS-CCHHHHHHHHHHHHHHTC--CCEEEECC-SSCCTTHH
T ss_pred HHHHhcCCCEEe---------c-----------------CCc-ccHHHHHHHHHhhccCCC--CccEEecC-CCCHHHHH
Confidence 998888776442 0 111 245667788887 6 69999999 99999999
Q ss_pred HHHHhC-CCEEEEchhh
Q 012517 411 RKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 411 e~i~aG-Ad~Vqv~Tal 426 (462)
+.++.| +|+||+=-.-
T Consensus 272 ~~i~~~~~d~v~ik~~~ 288 (392)
T 3p3b_A 272 EWATRGRVDVLQYDIIW 288 (392)
T ss_dssp HHHHTTSCCEECCBTTT
T ss_pred HHHHcCCCCEEEeCccc
Confidence 999998 8999986554
No 231
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.63 E-value=0.014 Score=55.19 Aligned_cols=123 Identities=12% Similarity=0.045 Sum_probs=74.9
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|++.++.++. .+.+.+.++.+++. . .....+.|=+-+..+.+++. .+.+.|++-+++
T Consensus 82 Gad~vtVH~~~g----------~~~l~~a~~~~~~~----g---~~~~~~~Vt~lts~~~~~~~----~~~~~~~~~~v~ 140 (221)
T 3exr_A 82 GADWMTCICSAT----------IPTMKAARKAIEDI----N---PDKGEIQVELYGDWTYDQAQ----QWLDAGISQAIY 140 (221)
T ss_dssp TCSEEEEETTSC----------HHHHHHHHHHHHHH----C---TTTCEEEEECCSSCCHHHHH----HHHHTTCCEEEE
T ss_pred CCCEEEEeccCC----------HHHHHHHHHHHHhc----C---CCcceEEEEEcCCCCHHHHH----HHHcCCHHHHHH
Confidence 399999997642 12344444444432 0 01245666666666644443 335678887776
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
.-... . ...|.. .+.+-++.+++.++.+++|...||| +++++.+.+.+|||.+-++|++ +
T Consensus 141 ~~a~~-----------~-~~~Gvv------~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I-~ 200 (221)
T 3exr_A 141 HQSRD-----------A-LLAGET------WGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGI-T 200 (221)
T ss_dssp ECCHH-----------H-HHHTCC------CCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHH-H
T ss_pred HHHHh-----------c-CCCccc------cCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECchh-h
Confidence 31110 0 011211 1234566676666446889999999 6788889999999999999987 4
Q ss_pred cCCC
Q 012517 429 GGPA 432 (462)
Q Consensus 429 ~GP~ 432 (462)
+.++
T Consensus 201 ~a~d 204 (221)
T 3exr_A 201 EAKN 204 (221)
T ss_dssp TSSS
T ss_pred CCCC
Confidence 4444
No 232
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=96.62 E-value=0.074 Score=55.27 Aligned_cols=109 Identities=14% Similarity=0.067 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC
Q 012517 293 QLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS 372 (462)
Q Consensus 293 ~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS 372 (462)
...+.+++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|- +
T Consensus 225 ~d~~~v~avR~a~-------G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE---------e--------------- 273 (440)
T 3t6c_A 225 SIPRLFDHLRNKL-------GFSVELLHDAHERITPINAIHMAKALEPYQLFFLE---------D--------------- 273 (440)
T ss_dssp HHHHHHHHHHHHH-------CSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE---------C---------------
T ss_pred HHHHHHHHHHHhc-------CCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE---------C---------------
Confidence 3455666666654 45789999999889988999999999999888762 1
Q ss_pred CCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 373 GKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 373 G~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
|+.+...+..+++++.+ .+||++...+.+.+|+.++++.| +|+||+--+-+ .|..-..+|
T Consensus 274 --P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGit~~~~i 334 (440)
T 3t6c_A 274 --PVAPENTEWLKMLRQQS--STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSI-GGITPAKKI 334 (440)
T ss_dssp --SSCGGGGGGHHHHHHHC--CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHH
T ss_pred --CCChhhHHHHHHHHhhc--CCCEEeCcccCCHHHHHHHHHcCCccceeechhhh-CCHHHHHHH
Confidence 11122345567888888 69999999999999999999987 89999987764 354333333
No 233
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.61 E-value=0.0086 Score=56.78 Aligned_cols=123 Identities=20% Similarity=0.260 Sum_probs=76.4
Q ss_pred HHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+..+.++.+.+. .+.+|+-+.+|+ ..+.++.+++.. ..+.+....-++. +-++
T Consensus 30 ~~~~~~~al~~gGv~~iel~~k~~~------------~~~~i~~l~~~~----------~~l~vgaGtvl~~----d~~~ 83 (224)
T 1vhc_A 30 DILPLADTLAKNGLSVAEITFRSEA------------AADAIRLLRANR----------PDFLIAAGTVLTA----EQVV 83 (224)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTSTT------------HHHHHHHHHHHC----------TTCEEEEESCCSH----HHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccCch------------HHHHHHHHHHhC----------cCcEEeeCcEeeH----HHHH
Confidence 566667767664 999999865432 124455554431 2344444322332 4578
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|+|+|+..++ ..++++..++ . .+++|- |+.|++++.+.+++|
T Consensus 84 ~A~~aGAd~v~~p~~----------------------------d~~v~~~ar~-~--g~~~i~--Gv~t~~e~~~A~~~G 130 (224)
T 1vhc_A 84 LAKSSGADFVVTPGL----------------------------NPKIVKLCQD-L--NFPITP--GVNNPMAIEIALEMG 130 (224)
T ss_dssp HHHHHTCSEEECSSC----------------------------CHHHHHHHHH-T--TCCEEC--EECSHHHHHHHHHTT
T ss_pred HHHHCCCCEEEECCC----------------------------CHHHHHHHHH-h--CCCEEe--ccCCHHHHHHHHHCC
Confidence 888999999964332 1344555555 4 345443 499999999999999
Q ss_pred CCEEEEchhhhhcCCChHHHHHH
Q 012517 417 ATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~~ 439 (462)
||.|.++.+-...|+..++.++.
T Consensus 131 ad~vk~Fpa~~~gG~~~lk~l~~ 153 (224)
T 1vhc_A 131 ISAVKFFPAEASGGVKMIKALLG 153 (224)
T ss_dssp CCEEEETTTTTTTHHHHHHHHHT
T ss_pred CCEEEEeeCccccCHHHHHHHHh
Confidence 99999976432224555555544
No 234
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.56 E-value=0.0024 Score=59.69 Aligned_cols=63 Identities=13% Similarity=0.030 Sum_probs=46.8
Q ss_pred hHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh-cCCChHHHHHHHHHH
Q 012517 380 SNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY-GGPALIPQIKAELAE 443 (462)
Q Consensus 380 al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~-~GP~~i~~i~~~L~~ 443 (462)
.++.++++.+.+..++|+|+.|||+ ++++.+.+++||+.|.+.|++.. .+|...+++++.+..
T Consensus 130 g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~d~~~~~~~~~~v~~ 193 (210)
T 3ceu_A 130 TAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKFDACLDQNYLAVIEH 193 (210)
T ss_dssp CHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTTCCTTTSSCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcCCCHHHHHHHHHHHHH
Confidence 4566778877631279999999998 99999999999999999999964 345433444444444
No 235
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.55 E-value=0.013 Score=55.07 Aligned_cols=123 Identities=20% Similarity=0.183 Sum_probs=76.2
Q ss_pred HHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+..+.++.+.+. .+.+|+-+.+|+. .+.++.+++.. ..+.+.-..-++. +-++
T Consensus 29 ~~~~~~~al~~gGv~~iel~~k~~~~------------~~~i~~l~~~~----------~~~~vgagtvi~~----d~~~ 82 (214)
T 1wbh_A 29 HAVPMAKALVAGGVRVLNVTLRTECA------------VDAIRAIAKEV----------PEAIVGAGTVLNP----QQLA 82 (214)
T ss_dssp GHHHHHHHHHHTTCCEEEEESCSTTH------------HHHHHHHHHHC----------TTSEEEEESCCSH----HHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCChhH------------HHHHHHHHHHC----------cCCEEeeCEEEEH----HHHH
Confidence 566667766664 9999998754431 23455554431 1233433332332 4578
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.++|+|+|+..++. .+ +.+.++.. .+++|- |+.|++++.+.+++|
T Consensus 83 ~A~~aGAd~v~~p~~d----------------------------~~-v~~~~~~~--g~~~i~--G~~t~~e~~~A~~~G 129 (214)
T 1wbh_A 83 EVTEAGAQFAISPGLT----------------------------EP-LLKAATEG--TIPLIP--GISTVSELMLGMDYG 129 (214)
T ss_dssp HHHHHTCSCEEESSCC----------------------------HH-HHHHHHHS--SSCEEE--EESSHHHHHHHHHTT
T ss_pred HHHHcCCCEEEcCCCC----------------------------HH-HHHHHHHh--CCCEEE--ecCCHHHHHHHHHCC
Confidence 8899999999854321 12 33444445 466654 399999999999999
Q ss_pred CCEEEEchhhhhcCCChHHHHHH
Q 012517 417 ATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~~ 439 (462)
||.|.++.+-...|+..++.++.
T Consensus 130 ad~v~~Fpa~~~gG~~~lk~i~~ 152 (214)
T 1wbh_A 130 LKEFKFFPAEANGGVKALQAIAG 152 (214)
T ss_dssp CCEEEETTTTTTTHHHHHHHHHT
T ss_pred CCEEEEecCccccCHHHHHHHhh
Confidence 99999976432234555555543
No 236
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.54 E-value=0.0071 Score=57.03 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC-H
Q 012517 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS-G 406 (462)
Q Consensus 328 ~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s-~ 406 (462)
.+....+++.+.++|+||++++.|- -+.++.+|+.++ + .++.++||.. +
T Consensus 114 ~~~v~~~a~~a~~~G~~GvV~sat~----------------------------~~e~~~ir~~~~-~-f~~v~pGI~~~g 163 (215)
T 3ve9_A 114 DAFYPYLREVARRVNPKGFVAPATR----------------------------PSMISRVKGDFP-D-KLVISPGVGTQG 163 (215)
T ss_dssp GGGHHHHHHHHHHHCCSEEECCTTS----------------------------HHHHHHHHHHCT-T-SEEEECCTTSTT
T ss_pred HHHHHHHHHHHHHcCCCceeeCCCC----------------------------HHHHHHHHHhCC-C-cEEEcCCCCcCc
Confidence 3457889999999999999976542 134567888886 4 6888899973 1
Q ss_pred HHHHHHHHhCCCEEEEchhhhhcCCC---hHHHHHHHHHHHH
Q 012517 407 EDAYRKIRAGATLVQLYTAFAYGGPA---LIPQIKAELAECL 445 (462)
Q Consensus 407 ~dA~e~i~aGAd~Vqv~Tali~~GP~---~i~~i~~~L~~~l 445 (462)
.+..+.+++|||.+-++|++.. .++ .++++++++.+.+
T Consensus 164 ~~~~~a~~~Gad~iVvGr~I~~-a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 164 AKPGIALCHGADYEIVGRSVYQ-SADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp CCTTHHHHTTCSEEEECHHHHT-SSSHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHcCCCEEEeCHHHcC-CCCHHHHHHHHHHHHHHHH
Confidence 2677888999999999999965 343 3556666665544
No 237
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.53 E-value=0.018 Score=54.47 Aligned_cols=65 Identities=12% Similarity=0.231 Sum_probs=50.8
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHh
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRA 415 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~a 415 (462)
..+.+.|+|.|-+.. .. ..|| .+.++.+++.++ ++|+++.|||+ .+.+.+++++
T Consensus 124 ~~A~~~Gad~vk~Fp---a~-----------~~gG----------~~~lk~l~~~~~-~ipvvaiGGI~-~~N~~~~l~a 177 (224)
T 1vhc_A 124 EIALEMGISAVKFFP---AE-----------ASGG----------VKMIKALLGPYA-QLQIMPTGGIG-LHNIRDYLAI 177 (224)
T ss_dssp HHHHHTTCCEEEETT---TT-----------TTTH----------HHHHHHHHTTTT-TCEEEEBSSCC-TTTHHHHHTS
T ss_pred HHHHHCCCCEEEEee---Cc-----------cccC----------HHHHHHHHhhCC-CCeEEEECCcC-HHHHHHHHhc
Confidence 556789999998721 00 1223 467888988886 69999999995 6899999999
Q ss_pred -CCCEEEEchhhh
Q 012517 416 -GATLVQLYTAFA 427 (462)
Q Consensus 416 -GAd~Vqv~Tali 427 (462)
|++.|. +|++.
T Consensus 178 gga~~v~-gS~i~ 189 (224)
T 1vhc_A 178 PNIVACG-GSWFV 189 (224)
T ss_dssp TTBCCEE-ECGGG
T ss_pred CCCEEEE-Echhc
Confidence 899999 88885
No 238
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=96.53 E-value=0.016 Score=59.63 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC
Q 012517 293 QLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS 372 (462)
Q Consensus 293 ~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS 372 (462)
...+.+++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|- +
T Consensus 198 ~d~e~v~avR~a~-------g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE---------q--------------- 246 (410)
T 3dip_A 198 DGLEPFRKIRAAV-------GQRIEIMCELHSLWGTHAAARICNALADYGVLWVE---------D--------------- 246 (410)
T ss_dssp HHHHHHHHHHHHH-------TTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEE---------C---------------
T ss_pred HHHHHHHHHHHHc-------CCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEE---------C---------------
Confidence 4456677777665 35789999998888888999999999999988763 0
Q ss_pred CCc-CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 373 GKP-LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 373 G~~-l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
| +.+...+..+++++.+ .+||++.+.+.+.+|+.+.++.| +|+||+--+.+
T Consensus 247 --P~~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 299 (410)
T 3dip_A 247 --PIAKMDNIPAVADLRRQT--RAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWC 299 (410)
T ss_dssp --CBSCTTCHHHHHHHHHHH--CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTS
T ss_pred --CCCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCeEeeccccc
Confidence 1 1222456778899988 79999999999999999999988 89999977663
No 239
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.52 E-value=0.014 Score=57.69 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=51.4
Q ss_pred HHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 335 AAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 335 a~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
++.+.++|+|+|-+.|- +.+.++++.+.++++++|.++||| +.+.+.++.+
T Consensus 221 ~~eA~~aGaD~I~ld~~----------------------------~~e~l~~~v~~~~~~~~I~ASGGI-t~~~i~~~a~ 271 (296)
T 1qap_A 221 LDDALKAGADIIMLDNF----------------------------NTDQMREAVKRVNGQARLEVSGNV-TAETLREFAE 271 (296)
T ss_dssp HHHHHHTTCSEEEESSC----------------------------CHHHHHHHHHTTCTTCCEEECCCS-CHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCC----------------------------CHHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHH
Confidence 33446789999988662 235667777778778999999999 9999999999
Q ss_pred hCCCEEEEchhh
Q 012517 415 AGATLVQLYTAF 426 (462)
Q Consensus 415 aGAd~Vqv~Tal 426 (462)
+|+|.+.+++..
T Consensus 272 ~GvD~isvGsli 283 (296)
T 1qap_A 272 TGVDFISVGALT 283 (296)
T ss_dssp TTCSEEECSHHH
T ss_pred cCCCEEEEeHHH
Confidence 999999999844
No 240
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.51 E-value=0.035 Score=52.87 Aligned_cols=69 Identities=26% Similarity=0.271 Sum_probs=59.0
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH
Q 012517 327 SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG 406 (462)
Q Consensus 327 ~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~ 406 (462)
+.++..++++++.+.|++.|-++.++. .+++.++++++.++ + .+||.|-|.+.
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~-------------------------~a~e~I~~l~~~~~-~-~~iGaGTVlt~ 96 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSD-------------------------AAVEAIRLLRQAQP-E-MLIGAGTILNG 96 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST-------------------------THHHHHHHHHHHCT-T-CEEEEECCCSH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC-------------------------CHHHHHHHHHHhCC-C-CEEeECCcCCH
Confidence 345899999999999999999976541 15788999999885 3 79999999999
Q ss_pred HHHHHHHHhCCCEEEE
Q 012517 407 EDAYRKIRAGATLVQL 422 (462)
Q Consensus 407 ~dA~e~i~aGAd~Vqv 422 (462)
+++...+++||+.|..
T Consensus 97 ~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 97 EQALAAKEAGATFVVS 112 (232)
T ss_dssp HHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHcCCCEEEe
Confidence 9999999999999953
No 241
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.50 E-value=0.065 Score=50.50 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhh
Q 012517 252 SEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~ 330 (462)
+++ +....++.+.+ ..+.+||.+.+|+. .+.+++++++. .+ ++|=...=++
T Consensus 23 ~~~---~a~~~a~al~~gGi~~iEvt~~t~~a------------~~~I~~l~~~~--------p~--~~IGAGTVlt--- 74 (217)
T 3lab_A 23 DLV---HAIPMAKALVAGGVHLLEVTLRTEAG------------LAAISAIKKAV--------PE--AIVGAGTVCT--- 74 (217)
T ss_dssp CGG---GHHHHHHHHHHTTCCEEEEETTSTTH------------HHHHHHHHHHC--------TT--SEEEEECCCS---
T ss_pred CHH---HHHHHHHHHHHcCCCEEEEeCCCccH------------HHHHHHHHHHC--------CC--CeEeeccccC---
Confidence 455 44555555554 49999999988752 35566666542 12 2333333344
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc------cEEEecCCC
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI------PLIGCGGIS 404 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i------pIIg~GGI~ 404 (462)
.+-++.+.++|++.|+.-+. .-++++..++. ++ |++- |+.
T Consensus 75 -~~~a~~ai~AGA~fivsP~~----------------------------~~evi~~~~~~---~v~~~~~~~~~P--G~~ 120 (217)
T 3lab_A 75 -ADDFQKAIDAGAQFIVSPGL----------------------------TPELIEKAKQV---KLDGQWQGVFLP--GVA 120 (217)
T ss_dssp -HHHHHHHHHHTCSEEEESSC----------------------------CHHHHHHHHHH---HHHCSCCCEEEE--EEC
T ss_pred -HHHHHHHHHcCCCEEEeCCC----------------------------cHHHHHHHHHc---CCCccCCCeEeC--CCC
Confidence 34467788899998864332 12445554443 46 7766 889
Q ss_pred CHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHH
Q 012517 405 SGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 405 s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~ 439 (462)
|+.++.+.+++|||.|.+.-+-...||.+++.++.
T Consensus 121 TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~ 155 (217)
T 3lab_A 121 TASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSG 155 (217)
T ss_dssp SHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECccccccCHHHHHHHHh
Confidence 99999999999999999987765556777777754
No 242
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=96.49 E-value=0.047 Score=55.72 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=97.6
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE-EEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL-VKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~-vKispdl~~~~~~~ia 335 (462)
++++.++++. ..+..+-+++.+ +.+.-.+.+++|+++. +.+.+|+ |.....++.++..+++
T Consensus 145 ~~~~~a~~~~~~G~~~~KiKvG~----------~~~~d~~~v~avR~a~-------g~~~~l~~vDan~~~~~~~A~~~~ 207 (391)
T 3gd6_A 145 SNLDVVRQKLEQGFDVFRLYVGK----------NLDADEEFLSRVKEEF-------GSRVRIKSYDFSHLLNWKDAHRAI 207 (391)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSS----------CHHHHHHHHHHHHHHH-------GGGCEEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeCC----------CHHHHHHHHHHHHHHc-------CCCCcEEEecCCCCcCHHHHHHHH
Confidence 6666666553 358999999865 1234457778887765 3468999 9988888888999999
Q ss_pred HHHHHcCC--cEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 336 AVAVALRL--DGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 336 ~~~~~~Gv--dgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+.+.+.|+ +.|- + |+.+...+..+++++.+ .+|| ...+.+.+|+.+++
T Consensus 208 ~~l~~~~i~~~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPI--dE~~~~~~~~~~~~ 257 (391)
T 3gd6_A 208 KRLTKYDLGLEMIE---------S-----------------PAPRNDFDGLYQLRLKT--DYPI--SEHVWSFKQQQEMI 257 (391)
T ss_dssp HHHTTCCSSCCEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCE--EEECCCHHHHHHHH
T ss_pred HHHHhcCCCcceec---------C-----------------CCChhhHHHHHHHHHHc--CCCc--CCCCCCHHHHHHHH
Confidence 99999988 6552 1 11222467788999988 6999 78899999999999
Q ss_pred HhC-CCEEEEchhhhhcCCChHHHH
Q 012517 414 RAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+.| +|+||+--+-+ .|..-..+|
T Consensus 258 ~~~~~d~v~~k~~~~-GGit~~~~i 281 (391)
T 3gd6_A 258 KKDAIDIFNISPVFI-GGLTSAKKA 281 (391)
T ss_dssp HHTCCSEEEECHHHH-TSHHHHHHH
T ss_pred HcCCCCEEEECchhc-CCHHHHHHH
Confidence 987 89999988774 454434444
No 243
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.49 E-value=0.039 Score=55.29 Aligned_cols=170 Identities=20% Similarity=0.182 Sum_probs=94.9
Q ss_pred HHHHcccCcEEEEeccC-CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe---cCC----CChh-----
Q 012517 263 VHTLSQYADYLVINVSS-PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI---APD----LSKE----- 329 (462)
Q Consensus 263 ~~~l~~~aD~leiNvSs-Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi---spd----l~~~----- 329 (462)
+.+++ ||++-+.+.- |..+ -+-.+.-.+.+..|.+++++. +.|+++=+ ..+ .+.+
T Consensus 119 a~~~G--ADAVk~lv~~g~d~~----~e~~~~q~~~l~rv~~ec~~~------GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 119 LKEAG--ADAVKFLLYYDVDGD----PQVNVQKQAYIERIGSECQAE------DIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp HHHTT--CSEEEEEEEECTTSC----HHHHHHHHHHHHHHHHHHHHH------TCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred HHHcC--CCEEEEEEEcCCCch----HHHHHHHHHHHHHHHHHHHHc------CCceEEEEeccCCCCCCCcchhhhccC
Confidence 44444 9987764421 2111 000012334555555555543 78999855 221 1111
Q ss_pred --hHHHHHHHH--HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccc--hHHHHHHHHHhcCCCccEE-EecC
Q 012517 330 --DLEDIAAVA--VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSL--SNNILKEMYLLTRGKIPLI-GCGG 402 (462)
Q Consensus 330 --~~~~ia~~~--~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~--al~~v~~i~~~~~~~ipII-g~GG 402 (462)
-+...++.+ .+.|+|-+-+--+. . .... .|.=.|.+++.. +.+..+++-+.+ .+|+| .+||
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~-~--------~~~v-~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG 254 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPV-N--------MVYV-EGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAG 254 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSS-C--------GGGB-TTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTT
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCC-C--------hhhh-cccccccccccHHHHHHHHHHHHhcC--CCCEEEECCC
Confidence 155566666 56799988764221 0 0000 011123443332 334456666666 69955 7999
Q ss_pred CCCHHHHHHHH----HhCC--CEEEEchhhhhcCCC-hHHHHHHHHHHHHHHcCCCCHHHhh
Q 012517 403 ISSGEDAYRKI----RAGA--TLVQLYTAFAYGGPA-LIPQIKAELAECLERDGFKSIIEAV 457 (462)
Q Consensus 403 I~s~~dA~e~i----~aGA--d~Vqv~Tali~~GP~-~i~~i~~~L~~~l~~~G~~si~e~~ 457 (462)
+ +.++.++.+ ++|| +.|-+++++..++.. ++++=.+..++||+..|.++|.++-
T Consensus 255 ~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~ 315 (332)
T 3iv3_A 255 V-SAELFQETLVFAHKAGAKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQNINELN 315 (332)
T ss_dssp C-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTTHHHHHHHHCHHHHHHHHTTHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHhhhhhhccccHHHHHHHHHHHhHHHHHHHH
Confidence 8 566665554 6999 999999999654322 2222245778999999988888763
No 244
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.0023 Score=62.03 Aligned_cols=82 Identities=11% Similarity=-0.002 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++|+...+.|++++++..=. + ...+.++++.+.+ .+||..-|||++- |+
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~----------------~---------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~ 90 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLG----------------P---------NNDDAAREALQES--PQFLQVGGGINDT-NC 90 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEES----------------S---------SCHHHHHHHHHHS--TTTSEEESSCCTT-TH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCC----------------C---------CCHHHHHHHHhcC--CceEEEeCCCCHH-HH
Confidence 67899999999999999876321 0 2467889999988 6999999999986 99
Q ss_pred HHHHHhCCCEEEEchhhhhcC-----CChHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFAYGG-----PALIPQIKAEL 441 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~G-----P~~i~~i~~~L 441 (462)
.+++ +||+-|-++|+++. + |.+++++.+..
T Consensus 91 ~~~l-~Ga~~Viigs~a~~-~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 91 LEWL-KWASKVIVTSWLFT-KEGHFQLKRLERLTELC 125 (260)
T ss_dssp HHHT-TTCSCEEECGGGBC-TTCCBCHHHHHHHHHHH
T ss_pred HHHh-cCCCEEEECcHHHh-hcCCCCHHHHHHHHHHh
Confidence 9999 99999999999975 6 88887777665
No 245
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.47 E-value=0.12 Score=51.97 Aligned_cols=239 Identities=13% Similarity=0.133 Sum_probs=140.8
Q ss_pred EEEcCeee---CCcEEeCC-CC--CCCHH----HHHHHHcCCccEEEecccccCC--CCCCCCCceeeecC-C---Cccc
Q 012517 128 LEVWGRKF---SNPLGLAA-GF--DKNAE----AVEGLLGLGFGFVEVGSVTPVP--QEGNPKPRIFRLRQ-E---GAII 191 (462)
Q Consensus 128 v~v~Gl~f---~NPiglAA-G~--dk~~e----~~~~l~~lGfG~VevgtvT~~p--q~GNp~PR~frl~~-d---~a~i 191 (462)
+++.|.++ ..|+.+|. |. ..+-+ .++...+.|.-+|=.++.+|+- .+.- .-|..+. . ..+.
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~---~~fq~~~~~~~~y~~~ 83 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEA---KQVIPGNADVSIYEIM 83 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGG---GGCCCTTCSSCHHHHH
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcch---hccccCCCCccHHHHH
Confidence 66777777 24777773 44 33333 5666778899999888877632 0000 0121110 0 0245
Q ss_pred ccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHccc-C
Q 012517 192 NRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQY-A 270 (462)
Q Consensus 192 N~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk~t~~~~~dy~~~~~~l~~~-a 270 (462)
...||+-+++..+.+..++.. -++...+ .+++.+ || +.++ +
T Consensus 84 ~~~~l~~e~~~~L~~~~~~~G---------------------------i~~~st~----~d~~sv-d~------l~~~~v 125 (349)
T 2wqp_A 84 ERCALNEEDEIKLKEYVESKG---------------------------MIFISTL----FSRAAA-LR------LQRMDI 125 (349)
T ss_dssp HHHCCCHHHHHHHHHHHHHTT---------------------------CEEEEEE----CSHHHH-HH------HHHHTC
T ss_pred HHhCCCHHHHHHHHHHHHHhC---------------------------CeEEEee----CCHHHH-HH------HHhcCC
Confidence 566888777766666554321 1233333 233321 22 3333 7
Q ss_pred cEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEec
Q 012517 271 DYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISN 350 (462)
Q Consensus 271 D~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsN 350 (462)
|++-| . -+++||-. ||+++-+ .++||++|--.. +.+|+...++.+.+.|.+-+.+.
T Consensus 126 ~~~KI--~------S~~~~n~~----LL~~va~----------~gkPviLstGma-t~~Ei~~Ave~i~~~G~~iiLlh- 181 (349)
T 2wqp_A 126 PAYKI--G------SGECNNYP----LIKLVAS----------FGKPIILSTGMN-SIESIKKSVEIIREAGVPYALLH- 181 (349)
T ss_dssp SCEEE--C------GGGTTCHH----HHHHHHT----------TCSCEEEECTTC-CHHHHHHHHHHHHHHTCCEEEEE-
T ss_pred CEEEE--C------cccccCHH----HHHHHHh----------cCCeEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEe-
Confidence 88776 2 35556544 4444432 478999999875 88899999999999998655543
Q ss_pred CCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh--h
Q 012517 351 TTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA--Y 428 (462)
Q Consensus 351 Tt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali--~ 428 (462)
++...+ . |.....+..|..+++.++ .+||.-++=-....-+...+.+||++|...=-+= .
T Consensus 182 c~s~Yp----~-------------~~~~~nL~ai~~lk~~f~-~lpVg~sdHt~G~~~~~AAvAlGA~iIEkH~tld~a~ 243 (349)
T 2wqp_A 182 CTNIYP----T-------------PYEDVRLGGMNDLSEAFP-DAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMDR 243 (349)
T ss_dssp CCCCSS----C-------------CGGGCCTHHHHHHHHHCT-TSEEEEECCSSSSHHHHHHHHHTCCEEEEEBCSCTTC
T ss_pred ccCCCC----C-------------ChhhcCHHHHHHHHHHCC-CCCEEeCCCCCcHHHHHHHHHhCCCEEEeCCCccccC
Confidence 321111 0 123356788899999874 4898777655557888899999999998763221 1
Q ss_pred cCCC--------hHHHHHHHHHHHHHHcC
Q 012517 429 GGPA--------LIPQIKAELAECLERDG 449 (462)
Q Consensus 429 ~GP~--------~i~~i~~~L~~~l~~~G 449 (462)
.||+ -++++.++++..-...|
T Consensus 244 ~G~D~~~SL~p~ef~~lv~~ir~~~~alG 272 (349)
T 2wqp_A 244 PGPDIVCSMNPDTFKELKQGAHALKLARG 272 (349)
T ss_dssp CSTTGGGCBCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCChhhhCCHHHHHHHHHHHHHHHHHhC
Confidence 2443 45666666655444444
No 246
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.46 E-value=0.039 Score=56.59 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=101.2
Q ss_pred eEEEEecCCC-CCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCE
Q 012517 241 ILGVNIGKNK-TSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 318 (462)
Q Consensus 241 ~lgvnig~nk-~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv 318 (462)
++.++++-.. .+++ ++++.++++. ..+..+-+++. |. .-.+.+++|+++. +.+.+|
T Consensus 151 ~~~~s~g~~~~~~~e---~~~~~a~~~~~~G~~~iKlKv~-~~-----------~d~~~v~avR~a~-------G~~~~L 208 (400)
T 3mwc_A 151 ESGAALGIPEDGRIE---TLIHQVEESLQEGYRRIKIKIK-PG-----------WDVEPLQETRRAV-------GDHFPL 208 (400)
T ss_dssp EBCEEECCCTTCCHH---HHHHHHHHHHHHTCSCEEEECB-TT-----------BSHHHHHHHHHHH-------CTTSCE
T ss_pred EeeEEeccCCCCCHH---HHHHHHHHHHHcCCCEEEEEeC-cc-----------hHHHHHHHHHHhc-------CCCCEE
Confidence 3555665221 1255 5555555443 35889999883 21 1246777887765 457899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 319 LVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 319 ~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
+|.....++.++ .++++.+.+.|++.|- . |+.+-..+..+++++.+ .+||+
T Consensus 209 ~vDaN~~w~~~~-~~~~~~l~~~~i~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~iPIa 259 (400)
T 3mwc_A 209 WTDANSSFELDQ-WETFKAMDAAKCLFHE-------Q-------------------PLHYEALLDLKELGERI--ETPIC 259 (400)
T ss_dssp EEECTTCCCGGG-HHHHHHHGGGCCSCEE-------S-------------------CSCTTCHHHHHHHHHHS--SSCEE
T ss_pred EEeCCCCCCHHH-HHHHHHHHhcCCCEEe-------C-------------------CCChhhHHHHHHHHhhC--CCCEE
Confidence 999888888888 8899999998887652 1 11222467778899988 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+...+.+.+|+.++++.| +|.||+--+-+ .|..-..+|
T Consensus 260 ~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i 298 (400)
T 3mwc_A 260 LDESLISSRVAEFVAKLGISNIWNIKIQRV-GGLLEAIKI 298 (400)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHH
T ss_pred EeCCcCCHHHHHHHHhcCCCCEEEEcchhh-CCHHHHHHH
Confidence 999999999999999987 89999987764 454333333
No 247
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=96.40 E-value=0.074 Score=54.12 Aligned_cols=137 Identities=11% Similarity=0.137 Sum_probs=97.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++.. +++ ++++.+++. ...+..+-+.+.. +.+.-.+.+++|+++. +.+.+|+
T Consensus 133 ~~y~t~g~~--~~e---~~~~~a~~~~~~Gf~~~KlK~g~----------~~~~d~~~v~avR~a~-------g~~~~L~ 190 (379)
T 3r0u_A 133 VTDVSISCG--NVA---ETIQNIQNGVEANFTAIKVKTGA----------DFNRDIQLLKALDNEF-------SKNIKFR 190 (379)
T ss_dssp EBCEEECCC--CHH---HHHHHHHHHHHTTCCEEEEECSS----------CHHHHHHHHHHHHHHC-------CTTSEEE
T ss_pred EEEEEecCC--CHH---HHHHHHHHHHHcCCCEEeeecCC----------CHHHHHHHHHHHHHhc-------CCCCeEE
Confidence 344555542 555 444444443 3358889998853 1233446667776653 3468999
Q ss_pred EEecCCCChhhHHHHHHHHHH--cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVA--LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPL 397 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~--~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI 397 (462)
|.....++.++..++++.+.+ .+++.|- + |+.+...+..+++++.+ .+||
T Consensus 191 vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE---------e-----------------P~~~~d~~~~~~l~~~~--~iPI 242 (379)
T 3r0u_A 191 FDANQGWNLAQTKQFIEEINKYSLNVEIIE---------Q-----------------PVKYYDIKAMAEITKFS--NIPV 242 (379)
T ss_dssp EECTTCCCHHHHHHHHHHHHTSCCCEEEEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCE
T ss_pred EeCCCCcCHHHHHHHHHHHhhcCCCcEEEE---------C-----------------CCCcccHHHHHHHHhcC--CCCE
Confidence 998888888899999999998 5555541 1 11222457788899988 6999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEchhhh
Q 012517 398 IGCGGISSGEDAYRKIRAG-ATLVQLYTAFA 427 (462)
Q Consensus 398 Ig~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali 427 (462)
++..-+.+.+|+.+.++.| +|.||+--+..
T Consensus 243 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 273 (379)
T 3r0u_A 243 VADESVFDAKDAERVIDEQACNMINIKLAKT 273 (379)
T ss_dssp EESTTCSSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred EeCCccCCHHHHHHHHHcCCCCEEEECcccc
Confidence 9999999999999999987 89999987764
No 248
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.39 E-value=0.036 Score=54.88 Aligned_cols=121 Identities=15% Similarity=0.051 Sum_probs=72.1
Q ss_pred cCcEEEEeccC-CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC---CC----h-hhHHHHHHHHH
Q 012517 269 YADYLVINVSS-PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD---LS----K-EDLEDIAAVAV 339 (462)
Q Consensus 269 ~aD~leiNvSs-Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd---l~----~-~~~~~ia~~~~ 339 (462)
.||++.+-+.. +..+ .....+.+..+.+++++ ...|+++=+-++ +. . +.+.+-++.+.
T Consensus 121 GAdaV~vlv~~~~d~~-------~~~~~~~i~~v~~~~~~------~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~ 187 (304)
T 1to3_A 121 GAKALKLLVLWRSDED-------AQQRLNMVKEFNELCHS------NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELG 187 (304)
T ss_dssp TCCEEEEEEEECTTSC-------HHHHHHHHHHHHHHHHT------TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCCCcc-------HHHHHHHHHHHHHHHHH------cCCcEEEEEECCCCccccCCChhHHHHHHHHHHH
Confidence 39998854321 1111 12233444445555443 368988876421 21 1 33556677788
Q ss_pred HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh----cCCCcc-EEEecCCCCH----HHHH
Q 012517 340 ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL----TRGKIP-LIGCGGISSG----EDAY 410 (462)
Q Consensus 340 ~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~----~~~~ip-IIg~GGI~s~----~dA~ 410 (462)
+.|+|.|-+.-+.. .+| ..+.+.++.+. + .+| |+..||| +. +.+.
T Consensus 188 ~lGaD~iKv~~~~~-------------~~g----------~~~~~~~vv~~~~~~~--~~P~Vv~aGG~-~~~~~~~~~~ 241 (304)
T 1to3_A 188 DSGADLYKVEMPLY-------------GKG----------ARSDLLTASQRLNGHI--NMPWVILSSGV-DEKLFPRAVR 241 (304)
T ss_dssp TSSCSEEEECCGGG-------------GCS----------CHHHHHHHHHHHHHTC--CSCEEECCTTS-CTTTHHHHHH
T ss_pred HcCCCEEEeCCCcC-------------CCC----------CHHHHHHHHHhccccC--CCCeEEEecCC-CHHHHHHHHH
Confidence 89999775542211 111 12333333333 6 689 9999999 55 3477
Q ss_pred HHHHhCCCEEEEchhhhh
Q 012517 411 RKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 411 e~i~aGAd~Vqv~Tali~ 428 (462)
+.+++||+.|-++|++..
T Consensus 242 ~a~~aGa~Gv~vGRaI~q 259 (304)
T 1to3_A 242 VAMEAGASGFLAGRAVWS 259 (304)
T ss_dssp HHHHTTCCEEEESHHHHG
T ss_pred HHHHcCCeEEEEehHHhC
Confidence 888999999999999964
No 249
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.34 E-value=0.029 Score=55.48 Aligned_cols=89 Identities=21% Similarity=0.225 Sum_probs=63.1
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~s 96 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESP-------------TTT----AAEKLELLKAVREEVGDRAKLIAGVGTNN 96 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTT-------------TSC----HHHHHHHHHHHHHHHTTTSEEEEECCCSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEecCCCCC
Confidence 5666789999999999999999988873221 111 12235677777787777899875545456
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 97 t~~ai~la~~A~~~Gadavlv~~P~y~-~~~ 126 (304)
T 3cpr_A 97 TRTSVELAEAAASAGADGLLVVTPYYS-KPS 126 (304)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 66666654 479999999999843 464
No 250
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=96.33 E-value=0.023 Score=57.47 Aligned_cols=120 Identities=18% Similarity=0.067 Sum_probs=88.8
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..++.+.++++ | +...+++++|+++. .+.+|++.....++.++ .++++
T Consensus 151 ~~~~~a~~~~~~G~~~iKik~~-~-----------~~d~~~v~avr~a~--------~~~~l~vDan~~~~~~~-~~~~~ 209 (375)
T 1r0m_A 151 ATVDLVRRHVEQGYRRIKLKIK-P-----------GWDVQPVRATREAF--------PDIRLTVDANSAYTLAD-AGRLR 209 (375)
T ss_dssp HHHHHHHHHHHTTCSCEEEECB-T-----------TBSHHHHHHHHHHC--------TTSCEEEECTTCCCGGG-HHHHH
T ss_pred HHHHHHHHHHHhcccEEEEecC-h-----------HHHHHHHHHHHHHc--------CCCeEEEeCCCCCCHHH-HHHHH
Confidence 5666555554 35899999873 2 11235677787653 36899999877788788 99999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- + |+.+...+..+++++.+ ++||++.+.+.+.+|+.+.++.|
T Consensus 210 ~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 261 (375)
T 1r0m_A 210 QLDEYDLTYIE---------Q-----------------PLAWDDLVDHAELARRI--RTPLCLDESVASASDARKALALG 261 (375)
T ss_dssp TTGGGCCSCEE---------C-----------------CSCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHT
T ss_pred HHHhCCCcEEE---------C-----------------CCCcccHHHHHHHHHhC--CCCEEecCccCCHHHHHHHHHhC
Confidence 99998887663 1 11122345678888888 69999999999999999999988
Q ss_pred -CCEEEEchhh
Q 012517 417 -ATLVQLYTAF 426 (462)
Q Consensus 417 -Ad~Vqv~Tal 426 (462)
+|.||+=-.-
T Consensus 262 ~~d~v~ik~~~ 272 (375)
T 1r0m_A 262 AGGVINLKVAR 272 (375)
T ss_dssp SCSEEEECTTT
T ss_pred CCCEEEECcch
Confidence 9999995544
No 251
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=96.32 E-value=0.081 Score=53.64 Aligned_cols=145 Identities=10% Similarity=0.073 Sum_probs=100.9
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
+..+++.. +++ +.++.+++. ...+..+-+.+... +.+.-.+.+++|+++. +.+.+|+|
T Consensus 138 ~~~t~~~~--~~~---~~~~~a~~~~~~G~~~~K~Kvg~~---------~~~~d~~~v~avR~~~-------g~~~~l~v 196 (377)
T 3my9_A 138 LSFSIADP--DFD---ADLERMRAMVPAGHTVFKMKTGVK---------PHAEELRILETMRGEF-------GERIDLRL 196 (377)
T ss_dssp BCEEECCS--SHH---HHHHHHHHHTTTTCCEEEEECSSS---------CHHHHHHHHHHHHHHH-------GGGSEEEE
T ss_pred EEEecCCC--CHH---HHHHHHHHHHHcCCCEEEEccCCC---------cHHHHHHHHHHHHHHh-------CCCCeEEE
Confidence 44455431 444 333334433 44688999988542 1223346777777765 34789999
Q ss_pred EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe
Q 012517 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC 400 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~ 400 (462)
.....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++.
T Consensus 197 Dan~~~~~~~A~~~~~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~d 248 (377)
T 3my9_A 197 DFNQALTPFGAMKILRDVDAFRPTFIE---------Q-----------------PVPRRHLDAMAGFAAAL--DTPILAD 248 (377)
T ss_dssp ECTTCCCTTTHHHHHHHHHTTCCSCEE---------C-----------------CSCTTCHHHHHHHHHHC--SSCEEES
T ss_pred eCCCCcCHHHHHHHHHHHhhcCCCEEE---------C-----------------CCCccCHHHHHHHHHhC--CCCEEEC
Confidence 998888888899999999999887652 1 11222467778899988 6999999
Q ss_pred cCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHH
Q 012517 401 GGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQ 436 (462)
Q Consensus 401 GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~ 436 (462)
+-+.+.+|+.+.++.| +|.||+--+-+ .|..-..+
T Consensus 249 E~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~ 284 (377)
T 3my9_A 249 ESCFDAVDLMEVVRRQAADAISVKIMKC-GGLMKAQS 284 (377)
T ss_dssp TTCSSHHHHHHHHHHTCCSEEECCHHHH-TSHHHHHH
T ss_pred CccCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHH
Confidence 9999999999999987 99999877764 34433333
No 252
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=96.31 E-value=0.0082 Score=62.23 Aligned_cols=98 Identities=13% Similarity=0.034 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSG 373 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG 373 (462)
..+++++|+++. +.+.+|+|.....++.++..++++.+.+.|++.|- .| +
T Consensus 214 ~~e~v~avR~a~-------G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP--~-------------- 263 (426)
T 4e4f_A 214 TPKLFEAVRDKF-------GFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME-------DP--T-------------- 263 (426)
T ss_dssp HHHHHHHHHHHH-------TTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CC--S--------------
T ss_pred HHHHHHHHHHHh-------CCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CC--C--------------
Confidence 456777777765 45799999998888888999999999999988763 11 1
Q ss_pred CcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 374 KPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 374 ~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
.+...+..+++++.+ .+||++.+.+.+.+|+.++++.| +|+||+--+.
T Consensus 264 ---~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~ 312 (426)
T 4e4f_A 264 ---PAENQACFRLIRQHT--VTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITH 312 (426)
T ss_dssp ---CCSSGGGGHHHHTTC--CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred ---ChHHHHHHHHHHhcC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 111234557888888 69999999999999999999988 8999876655
No 253
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=96.28 E-value=0.029 Score=56.53 Aligned_cols=140 Identities=17% Similarity=0.118 Sum_probs=96.6
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..++.+.++++ | +...+.+++|+++. .+.+|++.....++.++ .++++
T Consensus 144 ~~~~~a~~~~~~G~~~iKik~~-~-----------~~d~~~v~avr~a~--------~~~~l~vDan~~~~~~~-~~~~~ 202 (369)
T 2zc8_A 144 DTLRVVERHLEEGYRRIKLKIK-P-----------GWDYEVLKAVREAF--------PEATLTADANSAYSLAN-LAQLK 202 (369)
T ss_dssp HHHHHHHHHHHTTCSCEEEECB-T-----------TBSHHHHHHHHHHC--------TTSCEEEECTTCCCGGG-HHHHH
T ss_pred HHHHHHHHHHHhhhheeeeecC-h-----------hHHHHHHHHHHHHc--------CCCeEEEecCCCCCHHH-HHHHH
Confidence 5666665544 35899999873 2 11236677887653 36889998877788788 89999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|++.|- + |+.+...+..+++++.+ .+||++...+.+.+|+.+.++.|
T Consensus 203 ~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 254 (369)
T 2zc8_A 203 RLDELRLDYIE---------Q-----------------PLAYDDLLDHAKLQREL--STPICLDESLTGAEKARKAIELG 254 (369)
T ss_dssp GGGGGCCSCEE---------C-----------------CSCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHT
T ss_pred HHHhCCCcEEE---------C-----------------CCCcccHHHHHHHHhhC--CCCEEEcCccCCHHHHHHHHHhC
Confidence 99988887653 1 11122346677888888 69999999999999999999988
Q ss_pred -CCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 417 -ATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
+|+||+=-.-+ .|..-..++ .++.+++|+.
T Consensus 255 ~~d~v~ik~~~~-GGit~~~~i----~~~A~~~g~~ 285 (369)
T 2zc8_A 255 AGRVFNVKPARL-GGHGESLRV----HALAESAGIP 285 (369)
T ss_dssp CCSEEEECHHHH-TSHHHHHHH----HHHHHHTTCC
T ss_pred CCCEEEEchhhh-CCHHHHHHH----HHHHHHcCCc
Confidence 89999965543 343222222 3444456654
No 254
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.27 E-value=0.024 Score=55.66 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=63.8
Q ss_pred CChhhHHHHHHHHHH-cCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCC
Q 012517 326 LSKEDLEDIAAVAVA-LRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~-~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~ 404 (462)
++.+.+..+++.+.+ .|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~ 83 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGSTGENF-------------MLS----TEEKKEIFRIAKDEAKDQIALIAQVGSV 83 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEECCCS
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccccchh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEEecCCC
Confidence 566678999999999 9999999887763211 111 1223577777888888889987655555
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
+-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~-~~~ 114 (293)
T 1f6k_A 84 NLKEAVELGKYATELGYDCLSAVTPFYY-KFS 114 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 666666655 479999999999844 565
No 255
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=96.21 E-value=0.016 Score=59.45 Aligned_cols=124 Identities=13% Similarity=0.025 Sum_probs=87.3
Q ss_pred ccCcEEEEeccCCCC----CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCC
Q 012517 268 QYADYLVINVSSPNT----PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRL 343 (462)
Q Consensus 268 ~~aD~leiNvSsPnt----~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~Gv 343 (462)
..+..+-+.+..|.. .|.-...+.+.-.+.+++|+++. +.+.+|+|.....++.++..++++.+.+.|+
T Consensus 166 ~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i 238 (400)
T 4dxk_A 166 DGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAV-------GDKMDIMVEFHSMWQLLPAMQIAKALTPYQT 238 (400)
T ss_dssp TTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH-------GGGSEEEEECTTCBCHHHHHHHHHHTGGGCC
T ss_pred hCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHc-------CCCceEEEECCCCCCHHHHHHHHHHHhhcCC
Confidence 357788777542110 11000112234456677777665 3468999999888888899999999999998
Q ss_pred cEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEE
Q 012517 344 DGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQL 422 (462)
Q Consensus 344 dgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv 422 (462)
+.|- . |+.+...+..+++++.+ .+||++...+.+.+|+.+.++.| +|+||+
T Consensus 239 ~~iE-------e-------------------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 239 FWHE-------D-------------------PIKMDSLSSLTRYAAVS--PAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp SEEE-------C-------------------CBCTTSGGGHHHHHHHC--SSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred CEEE-------c-------------------CCCcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 8764 0 11111334567888888 79999999999999999999998 899999
Q ss_pred chhh
Q 012517 423 YTAF 426 (462)
Q Consensus 423 ~Tal 426 (462)
--+.
T Consensus 291 d~~~ 294 (400)
T 4dxk_A 291 DISW 294 (400)
T ss_dssp CTTT
T ss_pred Cccc
Confidence 7665
No 256
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.19 E-value=0.032 Score=55.13 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=65.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~-------------~Lt----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 95 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESP-------------TTT----DGEKIELLRAVLEAVGDRARVIAGAGTYD 95 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTTSEEEEECCCSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 5667899999999999999999988873211 111 12235777888888888899887666566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 96 t~~ai~la~~a~~~Gadavlv~~P~y~-~~s 125 (304)
T 3l21_A 96 TAHSIRLAKACAAEGAHGLLVVTPYYS-KPP 125 (304)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC-CCC
Confidence 77777665 479999999999854 463
No 257
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.18 E-value=0.032 Score=55.07 Aligned_cols=89 Identities=27% Similarity=0.293 Sum_probs=62.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~eEr~~v~~~~~~~~~grvpViaGvg~~~ 91 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAF-------------VQS----LSEREQVLEIVAEEAKGKIKLIAHVGCVS 91 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTTSEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5566789999999999999999988773211 111 12235677777888877899875444445
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 121 (303)
T 2wkj_A 92 TAESQQLAASAKRYGFDAVSAVTPFYY-PFS 121 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCCCC-CCC
Confidence 56666554 479999999999844 463
No 258
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.16 E-value=0.036 Score=52.66 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=64.3
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe-----cC
Q 012517 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC-----GG 402 (462)
Q Consensus 328 ~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~-----GG 402 (462)
.+++.++|+.+.+.|+.+|.+. +.+.++++++.+ ++||+|. ||
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~~------------------------------~~~~i~~ir~~v--~~Pvig~~k~d~~~ 82 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRIE------------------------------GIDNLRMTRSLV--SVPIIGIIKRDLDE 82 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE------------------------------SHHHHHHHHTTC--CSCEEEECBCCCSS
T ss_pred cchHHHHHHHHHHCCCeEEEEC------------------------------CHHHHHHHHHhc--CCCEEEEEeecCCC
Confidence 4688999999999999998752 246789999999 7999872 44
Q ss_pred --C---CCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHH
Q 012517 403 --I---SSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAE 443 (462)
Q Consensus 403 --I---~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~ 443 (462)
+ .+.+++.+.+++|||.|-+.++... .|..+.++.+...+
T Consensus 83 ~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~-~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 83 SPVRITPFLDDVDALAQAGAAIIAVDGTARQ-RPVAVEALLARIHH 127 (232)
T ss_dssp CCCCBSCSHHHHHHHHHHTCSEEEEECCSSC-CSSCHHHHHHHHHH
T ss_pred cceEeCccHHHHHHHHHcCCCEEEECccccC-CHHHHHHHHHHHHH
Confidence 3 3567999999999999999888643 58766666555543
No 259
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.15 E-value=0.037 Score=54.39 Aligned_cols=86 Identities=16% Similarity=0.064 Sum_probs=62.3
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+.+++|||+.-|=.+
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 83 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTTGEGC-------------SVG----SRERQAILSSFIAAGIAPSRIVTGVLVDS 83 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHTTCCGGGEEEEECCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCCCcc
Confidence 5667789999999999999999888773211 111 12235777888888888899875444456
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhh
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAY 428 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~ 428 (462)
-+++.+.. ++|||.|++.+.+.+
T Consensus 84 t~~ai~la~~A~~~Gadavlv~~P~y~ 110 (294)
T 3b4u_A 84 IEDAADQSAEALNAGARNILLAPPSYF 110 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 66666655 479999999999854
No 260
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.11 E-value=0.037 Score=54.58 Aligned_cols=89 Identities=12% Similarity=0.222 Sum_probs=62.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+.+++|||+.-|=.+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~eEr~~v~~~~~~~~~grvpViaGvg~~~ 92 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESP-------------TLT----SEEKVALYRHVVSVVDKRVPVIAGTGSNN 92 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 5566789999999999999999988773211 111 12235677777888877899875545455
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 122 (301)
T 1xky_A 93 THASIDLTKKATEVGVDAVMLVAPYYN-KPS 122 (301)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC-CCC
Confidence 66666554 479999999999844 464
No 261
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.11 E-value=0.29 Score=48.20 Aligned_cols=149 Identities=13% Similarity=0.045 Sum_probs=88.5
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcccCcEEEEeccC-CCCCCccc---ccCchHHHHHHHHHHHHHHhhccCCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQYADYLVINVSS-PNTPGLRM---LQGRKQLKDLVKKVQAARDEMQWGEEGP 315 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~~aD~leiNvSs-Pnt~glr~---lq~~~~l~~ll~aV~~~~~~~~~~~~~~ 315 (462)
||.+.+-- ...+++.+..-+..+.++ .++++.|+=.+ |-.+|+.. +...+...+-++++++++ ..
T Consensus 80 PviaD~d~Gyg~~~~~~~~~v~~l~~a--Ga~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~--------~~ 149 (295)
T 1xg4_A 80 PLLVDADIGFGSSAFNVARTVKSMIKA--GAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAK--------TD 149 (295)
T ss_dssp CEEEECTTCSSSSHHHHHHHHHHHHHH--TCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHC--------SS
T ss_pred CEEecCCcccCCCHHHHHHHHHHHHHc--CCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhc--------cC
Confidence 57777721 122455333333333333 39998887654 33333322 333333333344444332 24
Q ss_pred CCEEEEecCCCCh----hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 316 PPLLVKIAPDLSK----EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 316 ~Pv~vKispdl~~----~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.+++|.-..|... ++..+-++++.++|+|+|.+-.. .+.+.++++.+.+
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~---------------------------~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI---------------------------TELAMYRQFADAV 202 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC---------------------------CSHHHHHHHHHHH
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC---------------------------CCHHHHHHHHHHc
Confidence 5666766655332 57778888999999999987421 1356788898988
Q ss_pred CCCccEEEecCC---CCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 392 RGKIPLIGCGGI---SSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 392 ~~~ipIIg~GGI---~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++|++++.-+ +..-...++-+.|.+.|.++.+++.
T Consensus 203 --~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 203 --QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp --CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH
T ss_pred --CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH
Confidence 6899775432 2223345666799999999888754
No 262
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.08 E-value=0.29 Score=47.31 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=63.2
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
.++||++|-..+.+.+++.+.++.+...|..-+++.-... + .+++.+.....++.+..+++..
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~-~--------------~~~~y~~~~v~L~ai~~lk~~~-- 191 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGI-R--------------TFETATRFTLDISAVPVVKELS-- 191 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB-C--------------CSCCSSSSBCCTTHHHHHHHHB--
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCC-C--------------CCCCcChhhcCHHHHHHHHhhh--
Confidence 3789999998887888999999999999986666653210 0 1111122344667788888887
Q ss_pred CccEEEe----cCCCC--HHHHHHHHHhCCCEEEEchh
Q 012517 394 KIPLIGC----GGISS--GEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 394 ~ipIIg~----GGI~s--~~dA~e~i~aGAd~Vqv~Ta 425 (462)
.+|||+- +|... +.-+...+.+||+.+++=+-
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEec
Confidence 5898653 33322 13366778899996666554
No 263
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.07 E-value=0.038 Score=54.20 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=64.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTTGEAS-------------TLS----MEEHTQVIKEIIRVANKRIPIIAGTGANS 81 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccccc-------------cCC----HHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 5667889999999999999999888773211 111 12235777788888888899886555566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~-~~~ 111 (291)
T 3tak_A 82 TREAIELTKAAKDLGADAALLVTPYYN-KPT 111 (291)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC-CCC
Confidence 77777654 589999999999854 464
No 264
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=96.04 E-value=0.16 Score=51.67 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=97.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHH-HcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHT-LSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~-l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++.. +++ +.++.+++ +...+..+-+.+... +.+.-.+.+++|+++. .+.+|+
T Consensus 139 ~~~~t~~~~--~~~---~~~~~a~~~~~~G~~~~K~Kvg~~---------~~~~d~~~v~avR~a~--------~~~~l~ 196 (385)
T 3i6e_A 139 PLSCSIANP--DFD---ADIALMERLRADGVGLIKLKTGFR---------DHAFDIMRLELIARDF--------PEFRVR 196 (385)
T ss_dssp EBEEEECCS--SHH---HHHHHHHHHHHHTCCEEEEECSSS---------CHHHHHHHHHHHHHHC--------TTSEEE
T ss_pred EEEEEcCCC--CHH---HHHHHHHHHHHcCCCEEEEecCCC---------CHHHHHHHHHHHHHhC--------CCCeEE
Confidence 355566532 444 22333333 334688999988542 1123346677777653 368999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|.....++.++..++++.+.+.|++.|- + |+.+...+..+++++.+ .+||++
T Consensus 197 vDan~~~~~~~A~~~~~~L~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~iPIa~ 248 (385)
T 3i6e_A 197 VDYNQGLEIDEAVPRVLDVAQFQPDFIE---------Q-----------------PVRAHHFELMARLRGLT--DVPLLA 248 (385)
T ss_dssp EECTTCCCGGGHHHHHHHHHTTCCSCEE---------C-----------------CSCTTCHHHHHHHHTTC--SSCEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEE---------C-----------------CCCcccHHHHHHHHHhC--CCCEEE
Confidence 9988888888999999999998877652 1 11222467778899888 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCC
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGP 431 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP 431 (462)
..-+.+.+|+.+.++.| +|.||+--+-+ .|.
T Consensus 249 dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGi 280 (385)
T 3i6e_A 249 DESVYGPEDMVRAAHEGICDGVSIKIMKS-GGL 280 (385)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHHHH-TSH
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEeccccc-CCH
Confidence 99999999999999987 89999987764 343
No 265
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.04 E-value=0.032 Score=55.40 Aligned_cols=89 Identities=19% Similarity=0.286 Sum_probs=64.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~v~~~~grvpViaGvg~~s 103 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTTGESA-------------TLD----VEEHIQVIRRVVDQVKGRIPVIAGTGANS 103 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGGGTGG-------------GCC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCCCcC
Confidence 5566889999999999999999887763211 111 12235677777888888899887666666
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 104 t~eai~la~~A~~~Gadavlv~~P~y~-~~s 133 (314)
T 3qze_A 104 TREAVALTEAAKSGGADACLLVTPYYN-KPT 133 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC
Confidence 77777655 589999999999854 464
No 266
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.03 E-value=0.04 Score=54.05 Aligned_cols=89 Identities=18% Similarity=0.242 Sum_probs=63.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESA-------------TLN----HDEHADVVMMTLDLADGRIPVIAGTGANA 81 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCCcc
Confidence 5666789999999999999999988873211 111 12235677777887777899875555556
Q ss_pred HHHHHHHHH----hCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKIR----AGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i~----aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+..+ +|||.|++.+...+ .|.
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~-~~s 111 (292)
T 2ojp_A 82 TAEAISLTQRFNDSGIVGCLTVTPYYN-RPS 111 (292)
T ss_dssp HHHHHHHHHHTTTSSCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 677776654 69999999999844 463
No 267
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.02 E-value=0.034 Score=54.61 Aligned_cols=89 Identities=21% Similarity=0.294 Sum_probs=65.0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-------------~Lt----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 82 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTTAESP-------------TLT----TDEKELILKTVIDLVDKRVPVIAGTGTND 82 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccccc-------------cCC----HHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 4556889999999999999999887763211 111 12235677777888778899887666667
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 83 t~~ai~la~~a~~~Gadavlv~~P~y~-~~~ 112 (292)
T 3daq_A 83 TEKSIQASIQAKALGADAIMLITPYYN-KTN 112 (292)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC-CCC
Confidence 77777755 479999999999854 464
No 268
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=96.02 E-value=0.031 Score=55.64 Aligned_cols=89 Identities=20% Similarity=0.198 Sum_probs=62.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 91 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILGTNAEAF-------------LLT----REERAQLIATARKAVGPDFPIMAGVGAHS 91 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHHHCTTSCEEEECCCSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 5566889999999999999999988773211 111 12235677788888888899876555556
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGP 431 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP 431 (462)
-+++.+.. ++|||.|++.+...|..|
T Consensus 92 t~~ai~la~~a~~~Gadavlv~~P~y~~kp 121 (318)
T 3qfe_A 92 TRQVLEHINDASVAGANYVLVLPPAYFGKA 121 (318)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCC---C
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCC
Confidence 66666655 489999999999756434
No 269
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.01 E-value=0.044 Score=55.53 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=60.0
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.|+.+-+..+. .+.++.+.++|+|.|++ |+.. |. .....+.++++++.+ +
T Consensus 95 ~~pvga~ig~~~-----~e~a~~l~eaGad~I~l-d~a~----------------G~-----~~~~~~~i~~i~~~~--~ 145 (361)
T 3khj_A 95 GLRVGAAIGVNE-----IERAKLLVEAGVDVIVL-DSAH----------------GH-----SLNIIRTLKEIKSKM--N 145 (361)
T ss_dssp CCCCEEEECTTC-----HHHHHHHHHTTCSEEEE-CCSC----------------CS-----BHHHHHHHHHHHHHC--C
T ss_pred CceEEEEeCCCH-----HHHHHHHHHcCcCeEEE-eCCC----------------CC-----cHHHHHHHHHHHHhc--C
Confidence 678888886532 67788899999998865 4321 11 112457788888888 6
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
+|||+ |.+.+.++|.+++++|||.|-++
T Consensus 146 ~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 146 IDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp CEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred CcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 88876 67899999999999999999984
No 270
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.98 E-value=0.033 Score=55.36 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=64.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~v~~~~grvpViaGvg~~s 102 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTTGESP-------------TLT----HEEHKRIIELCVEQVAKRVPVVAGAGSNS 102 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcc-------------ccC----HHHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 5567889999999999999999887763211 111 12235677788888888899877656566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 103 t~~ai~la~~A~~~Gadavlv~~P~y~-~~~ 132 (315)
T 3si9_A 103 TSEAVELAKHAEKAGADAVLVVTPYYN-RPN 132 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 77777654 589999999999854 464
No 271
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.96 E-value=0.039 Score=55.56 Aligned_cols=89 Identities=13% Similarity=0.150 Sum_probs=63.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
+|.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+.+++|||+--|=.+
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSGGEFS-------------QLG----AEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5666789999999999999999988873211 111 12235677777888877899875555456
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 112 t~eai~la~~A~~~Gadavlv~~P~Y~-~~s 141 (343)
T 2v9d_A 112 ARETIELSQHAQQAGADGIVVINPYYW-KVS 141 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 66666654 479999999999844 463
No 272
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.96 E-value=0.041 Score=55.13 Aligned_cols=88 Identities=19% Similarity=0.135 Sum_probs=62.2
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE-EecCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI-GCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII-g~GGI~ 404 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++||| |+|+ .
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~eEr~~vi~~~ve~~~grvpViaGvg~-~ 113 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGSTGIYM-------------YLT----REERRRAIEAAATILRGRRTLMAGIGA-L 113 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEEECC-S
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCC-C
Confidence 5566789999999999999999988873211 111 1223577777888887789987 5555 4
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
+-+++.+.. ++|||.|++.+...+ .|.
T Consensus 114 st~eai~la~~A~~~Gadavlv~~P~Y~-~~s 144 (332)
T 2r8w_A 114 RTDEAVALAKDAEAAGADALLLAPVSYT-PLT 144 (332)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCSS-CCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 555565544 479999999999844 454
No 273
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.94 E-value=0.34 Score=46.83 Aligned_cols=79 Identities=19% Similarity=0.105 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHH---
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGE--- 407 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~--- 407 (462)
+..+++.+.++|+|||+++. +-++.+|+.++.+ .++.+.||.-..
T Consensus 146 v~~~A~~a~~~G~dGvV~s~-------------------------------~e~~~ir~~~~~~-f~~vtPGIr~~g~~~ 193 (259)
T 3tfx_A 146 VLSLAKMAKHSGADGVICSP-------------------------------LEVKKLHENIGDD-FLYVTPGIRPAGNAK 193 (259)
T ss_dssp HHHHHHHHHHTTCCEEECCG-------------------------------GGHHHHHHHHCSS-SEEEECCCCCC----
T ss_pred HHHHHHHHHHhCCCEEEECH-------------------------------HHHHHHHhhcCCc-cEEEcCCcCCCCCCc
Confidence 44778888899999998641 1135667777543 467789987421
Q ss_pred -H------HHHHHHhCCCEEEEchhhhhcCCCh---HHHHHHHHH
Q 012517 408 -D------AYRKIRAGATLVQLYTAFAYGGPAL---IPQIKAELA 442 (462)
Q Consensus 408 -d------A~e~i~aGAd~Vqv~Tali~~GP~~---i~~i~~~L~ 442 (462)
| +.+.+++|||.+-++|++ ++.++- +++|++++.
T Consensus 194 gDQ~Rv~T~~~a~~aGad~iVvGr~I-~~a~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 194 DDQSRVATPKMAKEWGSSAIVVGRPI-TLASDPKAAYEAIKKEFN 237 (259)
T ss_dssp -------CHHHHHHTTCSEEEECHHH-HTSSSHHHHHHHHHHHHT
T ss_pred CCccccCCHHHHHHcCCCEEEEChHH-hCCCCHHHHHHHHHHHHH
Confidence 1 667889999999999998 444543 344444433
No 274
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.94 E-value=0.022 Score=54.04 Aligned_cols=123 Identities=19% Similarity=0.178 Sum_probs=75.9
Q ss_pred HHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
+..+.++.+.+. ++.+|+-+.+|+ -.+.++.+++.. .+.-+..-. . ++. +-++
T Consensus 39 ~~~~~~~al~~gGv~~iel~~k~~~------------~~~~i~~l~~~~--------~~~~igagt-v-l~~----d~~~ 92 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEVTLRSQH------------GLKAIQVLREQR--------PELCVGAGT-V-LDR----SMFA 92 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEEESSSTH------------HHHHHHHHHHHC--------TTSEEEEEC-C-CSH----HHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcc------------HHHHHHHHHHhC--------cccEEeeCe-E-eeH----HHHH
Confidence 566667767664 999999764332 224455554431 122333332 2 442 5578
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.++|+|+|+..++. .+ +.+.++.. .+++|- |+.|++++.+.+++|
T Consensus 93 ~A~~aGAd~v~~p~~d----------------------------~~-v~~~~~~~--g~~~i~--G~~t~~e~~~A~~~G 139 (225)
T 1mxs_A 93 AVEAAGAQFVVTPGIT----------------------------ED-ILEAGVDS--EIPLLP--GISTPSEIMMGYALG 139 (225)
T ss_dssp HHHHHTCSSEECSSCC----------------------------HH-HHHHHHHC--SSCEEC--EECSHHHHHHHHTTT
T ss_pred HHHHCCCCEEEeCCCC----------------------------HH-HHHHHHHh--CCCEEE--eeCCHHHHHHHHHCC
Confidence 8899999999743221 12 33444555 466653 399999999999999
Q ss_pred CCEEEEchhhhhcCCChHHHHHH
Q 012517 417 ATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~~ 439 (462)
||.|.++.+-...|+..++.++.
T Consensus 140 ad~vk~FPa~~~~G~~~lk~i~~ 162 (225)
T 1mxs_A 140 YRRFKLFPAEISGGVAAIKAFGG 162 (225)
T ss_dssp CCEEEETTHHHHTHHHHHHHHHT
T ss_pred CCEEEEccCccccCHHHHHHHHh
Confidence 99999976433335666666654
No 275
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.93 E-value=0.064 Score=52.72 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=64.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 87 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESA-------------TLS----VEEHTAVIEAVVKHVAKRVPVIAGTGANN 87 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcc-------------cCC----HHHHHHHHHHHHHHhCCCCcEEEeCCCcC
Confidence 5567889999999999999999988773211 111 12235677788888888899886555566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 88 t~~ai~la~~a~~~Gadavlv~~P~y~-~~~ 117 (297)
T 3flu_A 88 TVEAIALSQAAEKAGADYTLSVVPYYN-KPS 117 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC-CCC
Confidence 77776655 589999999999854 464
No 276
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.89 E-value=0.074 Score=51.82 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++|+..++.|+++|.+-.-. . ..+| +.+.++.+++.+ ++||+--+.|.++.++
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~-~------------~f~G---------s~~~L~~ir~~v--~lPVl~Kdfi~d~~qi 135 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDT-P------------SFQG---------APEFLTAARQAC--SLPALRKDFLFDPYQV 135 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCS-T------------TTCC---------CHHHHHHHHHTS--SSCEEEESCCCSTHHH
T ss_pred CHHHHHHHHHHCCCCEEEEeccc-c------------ccCC---------CHHHHHHHHHhc--CCCEEECCccCCHHHH
Confidence 67899999999999999764210 0 1222 567889999998 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhh
Q 012517 410 YRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali 427 (462)
++...+|||.|-+..+.+
T Consensus 136 ~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 136 YEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHTTCSEEEEETTTS
T ss_pred HHHHHcCCCEEEEccccc
Confidence 999999999999998875
No 277
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.84 E-value=0.048 Score=53.90 Aligned_cols=92 Identities=23% Similarity=0.338 Sum_probs=64.6
Q ss_pred cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 323 spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
.-.++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~eEr~~vi~~~~~~~~grvpViaGvg 89 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESP-------------TVN----EDEREKLVSRTLEIVDGKIPVIVGAG 89 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-------------GCC----HHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEEcCC
Confidence 3346777899999999999999999888763211 111 12235677777787777899875545
Q ss_pred CCCHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 403 ISSGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 403 I~s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
=.+-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 90 ~~st~~ai~la~~A~~~Gadavlv~~P~y~-~~s 122 (306)
T 1o5k_A 90 TNSTEKTLKLVKQAEKLGANGVLVVTPYYN-KPT 122 (306)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred CccHHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 55666666554 479999999999844 464
No 278
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.81 E-value=0.027 Score=55.95 Aligned_cols=87 Identities=15% Similarity=0.149 Sum_probs=62.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE-EecCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI-GCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII-g~GGI~ 404 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++||| |+|+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~eEr~~vi~~~~~~~~grvpViaGvg~-- 90 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNTGEFY-------------ALT----IEEAKQVATRVTELVNGRATVVAGIGY-- 90 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEEECS--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcccCChh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEecCCc--
Confidence 5566789999999999999998877763211 111 1223577777788887789876 6777
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
+-+++.+.. ++|||.|++.+...+ .|.
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~-~~s 121 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHP-YIT 121 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCS-CCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCC-CCC
Confidence 666676655 479999999999844 564
No 279
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.78 E-value=0.037 Score=54.48 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=62.1
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 80 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESP-------------TLT----EEEHKRVVALVAEQAQGRVPVIAGAGSNN 80 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEEccCCCC
Confidence 5667889999999999999999887763211 111 12235677777777777898765444455
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 110 (297)
T 2rfg_A 81 PVEAVRYAQHAQQAGADAVLCVAGYYN-RPS 110 (297)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCTTT-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC-CCC
Confidence 56666554 479999999999854 464
No 280
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.77 E-value=0.65 Score=45.67 Aligned_cols=118 Identities=17% Similarity=0.100 Sum_probs=75.2
Q ss_pred HHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcC
Q 012517 263 VHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALR 342 (462)
Q Consensus 263 ~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~G 342 (462)
++.+.+++|++-|= -+.+++.+ +++++-+ .++||++|-....+.+|+...++.+.+.|
T Consensus 125 v~~l~~~vd~lkIg--------A~~~~n~~----LLr~va~----------~gkPVilK~Gms~t~~ei~~ave~i~~~G 182 (298)
T 3fs2_A 125 CAAVAPVVDVLQIP--------AFLCRQTD----LLIAAAR----------TGRVVNVKKGQFLAPWDMKNVLAKITESG 182 (298)
T ss_dssp HHHHTTTCSEEEEC--------GGGTTCHH----HHHHHHH----------TTSEEEEECCTTCCGGGHHHHHHHHHTTT
T ss_pred HHHHHhhCCEEEEC--------ccccCCHH----HHHHHHc----------cCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 34455668998872 23344444 4444432 37899999988778889999999999999
Q ss_pred CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe-----------cCCCCH-----
Q 012517 343 LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC-----------GGISSG----- 406 (462)
Q Consensus 343 vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~-----------GGI~s~----- 406 (462)
.+-|++.-.+...+ + .-....++.+..+++ + .+||+.. ||...+
T Consensus 183 n~~iiL~erg~~y~--------------~---~~~~vdl~~i~~lk~-~--~~PV~~D~sHsvq~p~~~~~~s~G~r~~v 242 (298)
T 3fs2_A 183 NPNVLATERGVSFG--------------Y---NTLVSDMRALPIMAG-L--GAPVIFDATHSVQQPGGQGGSTGGQREFV 242 (298)
T ss_dssp CCCEEEEECCEECS--------------S---SCEECCTTHHHHHHT-T--TSCEEEEHHHHTCCCC--------CGGGH
T ss_pred CCeEEEEECCCCCC--------------C---CCCccCHHHHHHHHH-c--CCcEEEcCCCccccCCcccCCCCCchhhH
Confidence 88888875442211 0 001124566777887 6 6999882 222333
Q ss_pred -HHHHHHHHhCCCEEEE
Q 012517 407 -EDAYRKIRAGATLVQL 422 (462)
Q Consensus 407 -~dA~e~i~aGAd~Vqv 422 (462)
.-+...+.+||+.+.|
T Consensus 243 ~~~a~AAvAlGAdGl~I 259 (298)
T 3fs2_A 243 ETLARAAVAVGVAGFFI 259 (298)
T ss_dssp HHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 4577888999995554
No 281
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=95.72 E-value=0.021 Score=55.70 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=30.8
Q ss_pred CccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
+++|.++||| +.+.+.+++++|||.+.+++.+.
T Consensus 229 ~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 229 FVLLEASGNI-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp TCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred CcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 5999999999 89999999999999999999864
No 282
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.68 E-value=0.029 Score=55.70 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=63.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-| .+
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~eEr~~v~~~~v~~~~grvpViaGvg-~~ 91 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNTSEFY-------------ALS----LEEAKEEVRRTVEYVHGRALVVAGIG-YA 91 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEEEC-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccCcc-------------cCC----HHHHHHHHHHHHHHhCCCCcEEEEeC-cC
Confidence 5567889999999999999999877763211 111 12235677788888888899776555 38
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+ |..|.
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~P~-y~~~s 121 (316)
T 3e96_A 92 TSTAIELGNAAKAAGADAVMIHMPI-HPYVT 121 (316)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCC-CSCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCC-CCCCC
Confidence 88887765 4799999999998 43453
No 283
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=95.65 E-value=0.18 Score=51.20 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=93.0
Q ss_pred HHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 259 YVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 259 y~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
+.++.+.+. ..+..+-+.+... +.+.-.+.+++|+++. +.+.+|+|.....++.++..++++.
T Consensus 153 ~~~~~~~~~~~G~~~~KiKvg~~---------~~~~d~~~v~avR~a~-------g~~~~l~vDaN~~~~~~~A~~~~~~ 216 (382)
T 3dgb_A 153 IAEAQKMLDLRRHRIFKLKIGAG---------EVDRDLAHVIAIKKAL-------GDSASVRVDVNQAWDEAVALRACRI 216 (382)
T ss_dssp HHHHHHHHHTTSCSEEEEECCSS---------CHHHHHHHHHHHHHHH-------GGGSEEEEECTTCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeeCCC---------CHHHHHHHHHHHHHHc-------CCCCeEEEeCCCCCCHHHHHHHHHH
Confidence 334444444 3588999888542 1223346677777765 2367899998888888888999999
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG- 416 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG- 416 (462)
+.+.++..|- + |+.+...+..+++++.+ .+||++..-+.+.+|+.++++.|
T Consensus 217 l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~~~ 268 (382)
T 3dgb_A 217 LGGNGIDLIE---------Q-----------------PISRNNRAGMVRLNASS--PAPIMADESIECVEDAFNLAREGA 268 (382)
T ss_dssp HHTTTCCCEE---------C-----------------CBCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHHTC
T ss_pred HhhcCcCeee---------C-----------------CCCccCHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHcCC
Confidence 9998876552 1 12223467788899988 79999999999999999999976
Q ss_pred CCEEEEchhhhhcCC
Q 012517 417 ATLVQLYTAFAYGGP 431 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP 431 (462)
+|.||+--+-+ .|.
T Consensus 269 ~d~v~~k~~~~-GGi 282 (382)
T 3dgb_A 269 ASVFALKIAKN-GGP 282 (382)
T ss_dssp CSEEEECHHHH-TSH
T ss_pred CCEEEeccccc-CCH
Confidence 89999987664 343
No 284
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.64 E-value=0.087 Score=51.56 Aligned_cols=92 Identities=20% Similarity=0.301 Sum_probs=64.4
Q ss_pred cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 323 spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
.-.++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg 77 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESP-------------TLS----HEEHKKVIEKVVDVVNGRVQVIAGAG 77 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEECC
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 3346777899999999999999999988773211 111 12235677777887877899875444
Q ss_pred CCCHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 403 ISSGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 403 I~s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
=.+-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 78 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~-~~s 110 (289)
T 2yxg_A 78 SNCTEEAIELSVFAEDVGADAVLSITPYYN-KPT 110 (289)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEEECCCSS-CCC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 45556666554 479999999999844 453
No 285
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=95.64 E-value=0.2 Score=51.03 Aligned_cols=148 Identities=18% Similarity=0.097 Sum_probs=99.5
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++. .+++ ++++.++++. ..+..+-+.+.+|..+ .+.+.-.+.+++|+++. +.+.+|+
T Consensus 136 ~~y~s~~~--~~~e---~~~~~a~~~~~~G~~~~K~Kvg~~~~~-----~~~~~d~~~v~avR~a~-------G~~~~L~ 198 (386)
T 3fv9_G 136 PVISSIGG--DTPE---AMRAKVARHRAQGFKGHSIKIGASEAE-----GGPALDAERITACLADR-------QPGEWYL 198 (386)
T ss_dssp CEEEEECS--CCHH---HHHHHHHHHHHTTCCEEEEECCCCTTT-----THHHHHHHHHHHHTTTC-------CTTCEEE
T ss_pred eeeEecCC--CCHH---HHHHHHHHHHHCCCCEEEEeccCCCCC-----CCHHHHHHHHHHHHHHc-------CCCCeEE
Confidence 46667764 2565 5555555543 4589999999876321 11223334555555432 4578999
Q ss_pred EEecCCCChhhHHHHHHHH-HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVA-VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~-~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
|.....++.++..++++.+ .+.++ .|- . |+. ..+..+++++.+ .+||.
T Consensus 199 vDaN~~~~~~~A~~~~~~l~~~~~i-~iE-------e-------------------P~~--~~~~~~~l~~~~--~iPIa 247 (386)
T 3fv9_G 199 ADANNGLTVEHALRMLSLLPPGLDI-VLE-------A-------------------PCA--SWAETKSLRARC--ALPLL 247 (386)
T ss_dssp EECTTCCCHHHHHHHHHHSCSSCCC-EEE-------C-------------------CCS--SHHHHHHHHTTC--CSCEE
T ss_pred EECCCCCCHHHHHHHHHHhhccCCc-EEe-------c-------------------CCC--CHHHHHHHHhhC--CCCEE
Confidence 9998888888888888877 55544 321 1 111 356678888888 69999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCChHHHH
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+..-+.+.+|+.+.++.| +|.||+--+.. .|..-..+|
T Consensus 248 ~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGit~~~~i 286 (386)
T 3fv9_G 248 LDELIQTETDLIAAIRDDLCDGVGLKVSKQ-GGITPMLRQ 286 (386)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEECcccc-CCHHHHHHH
Confidence 999999999999999987 99999987764 454333333
No 286
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.63 E-value=0.057 Score=53.62 Aligned_cols=89 Identities=12% Similarity=0.013 Sum_probs=64.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~-------------~Ls----~~Er~~v~~~~v~~~~grvpViaGvg~~~ 104 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGSTGEGA-------------YLS----DPEWDEVVDFTLKTVAHRVPTIVSVSDLT 104 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5566889999999999999999887763211 111 12235677788888878899877555566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 105 t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 134 (315)
T 3na8_A 105 TAKTVRRAQFAESLGAEAVMVLPISYW-KLN 134 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 77776654 589999999999854 464
No 287
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.63 E-value=0.056 Score=53.52 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=61.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 88 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQF-------------AIT----DDERDVLTRTILEHVAGRVPVIVTTSHYS 88 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcc-------------cCC----HHHHHHHHHHHHHHhCCCCcEEEecCCch
Confidence 5667899999999999999999988763211 111 12235677777888888999886555556
Q ss_pred HHHHHHHH----HhCCCEEEEchhhh
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFA 427 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali 427 (462)
-+++.+.. ++|||.+++.+.+.
T Consensus 89 t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 89 TQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 66666655 47999999999863
No 288
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=95.63 E-value=0.26 Score=50.61 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=97.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCC----------Cccc-ccCchHHHHHHHHHHHHHHhh
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTP----------GLRM-LQGRKQLKDLVKKVQAARDEM 308 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~----------glr~-lq~~~~l~~ll~aV~~~~~~~ 308 (462)
++..+++.. +++ ++.+.++++. ..+..+-+.+..+... .... ....+.+.+.++.|++.++.+
T Consensus 144 ~~y~~~~~~--~~~---~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~ 218 (421)
T 4hnl_A 144 PAYTHAVAD--NLD---DLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY 218 (421)
T ss_dssp EEEEEEEES--SHH---HHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH
T ss_pred ceecccCCC--CHH---HHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh
Confidence 444444432 555 5555455443 3588999887653321 0000 111233444444444444333
Q ss_pred ccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHH
Q 012517 309 QWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388 (462)
Q Consensus 309 ~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~ 388 (462)
+.+..|+|-....++.++..++++.+++.++..|- - |+.+...+..++++
T Consensus 219 ----G~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------e-------------------P~~~~d~~~~~~l~ 268 (421)
T 4hnl_A 219 ----GNQFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLE-------D-------------------ILPPDQSHWLTQLR 268 (421)
T ss_dssp ----TTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-------------------CSCGGGGGGHHHHH
T ss_pred ----CCCceEeccccccCCHHHHHHHHHHhhhhhhcccc-------c-------------------CCcccchHHHHHHH
Confidence 45789999988888888999999999998877651 1 12233455678889
Q ss_pred HhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 389 LLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 389 ~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+.+ ++||.+.--+.+.+|+.++|+.| +|.||+--.-
T Consensus 269 ~~~--~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~ 305 (421)
T 4hnl_A 269 SQS--ATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQ 305 (421)
T ss_dssp TTC--CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGG
T ss_pred hcC--CCCeecCcceehhHHHHHHHhcCCceEEEeCCCC
Confidence 988 79999999999999999999988 8999987665
No 289
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.60 E-value=0.13 Score=49.55 Aligned_cols=84 Identities=17% Similarity=0.008 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
.+..++|+..++.|+++|.+- |. .+.+.| +.+.++.+++.+ ++||..-++|.+..+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvl-t~---------------~~~f~G------~~~~l~~i~~~v--~lPvl~kdfI~d~~q 120 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVL-TE---------------PHRFGG------SLLDLKRVREAV--DLPLLRKDFVVDPFM 120 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEE-CC---------------CSSSCC------CHHHHHHHHHHC--CSCEEEESCCCSHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEe-cc---------------hhhhcc------CHHHHHHHHHhc--CCCEEECCcCCCHHH
Confidence 367899999999999999873 21 011112 457788899988 799999999999999
Q ss_pred HHHHHHhCCCEEEEchhhhhcCCChHHHHHH
Q 012517 409 AYRKIRAGATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~ 439 (462)
+.+.+.+|||.|-+..+.+- ..++++.+
T Consensus 121 i~~a~~~GAD~VlL~~~~l~---~~l~~l~~ 148 (254)
T 1vc4_A 121 LEEARAFGASAALLIVALLG---ELTGAYLE 148 (254)
T ss_dssp HHHHHHTTCSEEEEEHHHHG---GGHHHHHH
T ss_pred HHHHHHcCCCEEEECccchH---HHHHHHHH
Confidence 99999999999999999863 45555544
No 290
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.60 E-value=0.64 Score=42.86 Aligned_cols=120 Identities=11% Similarity=0.109 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCCh-----
Q 012517 254 DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSK----- 328 (462)
Q Consensus 254 ~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~----- 328 (462)
+...+.++.+...+ ++++.++ + .+.++++++. .+.|++-.+..++..
T Consensus 23 ~~~~~~a~~~~~~G--a~~i~~~--~---------------~~~i~~i~~~---------~~~pv~~~~~~~~~~~~~~i 74 (223)
T 1y0e_A 23 FIMSKMALAAYEGG--AVGIRAN--T---------------KEDILAIKET---------VDLPVIGIVKRDYDHSDVFI 74 (223)
T ss_dssp HHHHHHHHHHHHHT--CSEEEEE--S---------------HHHHHHHHHH---------CCSCEEEECBCCCTTCCCCB
T ss_pred ccHHHHHHHHHHCC--CeeeccC--C---------------HHHHHHHHHh---------cCCCEEeeeccCCCcccccc
Confidence 43445555555444 8998775 1 1446666654 367885322222100
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
....+-++.+.+.|+|.|++.-....+++ ....++++++++.++ +++++. ++.+.++
T Consensus 75 ~~~~~~i~~~~~~Gad~v~l~~~~~~~p~--------------------~~~~~~i~~~~~~~~-~~~v~~--~~~t~~e 131 (223)
T 1y0e_A 75 TATSKEVDELIESQCEVIALDATLQQRPK--------------------ETLDELVSYIRTHAP-NVEIMA--DIATVEE 131 (223)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECSCSCCSS--------------------SCHHHHHHHHHHHCT-TSEEEE--ECSSHHH
T ss_pred CCcHHHHHHHHhCCCCEEEEeeecccCcc--------------------cCHHHHHHHHHHhCC-CceEEe--cCCCHHH
Confidence 01123356677899999988643211110 013477888998874 455543 6789999
Q ss_pred HHHHHHhCCCEEEEch
Q 012517 409 AYRKIRAGATLVQLYT 424 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~T 424 (462)
+.+..++|+|+|++..
T Consensus 132 ~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 132 AKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHHHHHTTCSEEECTT
T ss_pred HHHHHHcCCCEEEeCC
Confidence 9999999999998743
No 291
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.58 E-value=0.029 Score=56.93 Aligned_cols=71 Identities=14% Similarity=0.097 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
++..+.++.+.++|+|.|++. +.. |.+ ....+.|+.+++..+ ++|||+ |+|.|+++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id-~a~----------------G~~-----~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~ 154 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVD-VAH----------------AHA-----KYVGKTLKSLRQLLG-SRCIMA-GNVATYAG 154 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CSC----------------CSS-----HHHHHHHHHHHHHHT-TCEEEE-EEECSHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEe-CCC----------------CCc-----HhHHHHHHHHHHhcC-CCeEEE-cCcCCHHH
Confidence 356788999999999966553 321 111 123578889998875 688876 77999999
Q ss_pred HHHHHHhCCCEEEEc
Q 012517 409 AYRKIRAGATLVQLY 423 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~ 423 (462)
|.+++++|||+|-++
T Consensus 155 A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 155 ADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEc
Confidence 999999999999984
No 292
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.58 E-value=0.04 Score=53.99 Aligned_cols=89 Identities=13% Similarity=0.179 Sum_probs=63.5
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~ 81 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEAT-------------TMT----ETERKETIKFVIDKVNKRIPVIAGTGSNN 81 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 5667789999999999999999888763211 111 12235677777887777899875555556
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~-~~s 111 (291)
T 3a5f_A 82 TAASIAMSKWAESIGVDGLLVITPYYN-KTT 111 (291)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC-CCC
Confidence 66666655 479999999999844 453
No 293
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.57 E-value=0.023 Score=56.14 Aligned_cols=32 Identities=9% Similarity=0.129 Sum_probs=30.1
Q ss_pred CccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+++|.++||| +.+.+.+++++|||.+.+++.+
T Consensus 244 ~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 244 SVAVEASGGI-TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp TSEEEEESSC-CTTTHHHHCCTTCCEEECTHHH
T ss_pred CeeEEEECCC-CHHHHHHHHHCCCCEEEEChhh
Confidence 5899999999 8999999999999999999965
No 294
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.56 E-value=0.088 Score=51.63 Aligned_cols=91 Identities=18% Similarity=0.252 Sum_probs=64.3
Q ss_pred CCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCC
Q 012517 324 PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGI 403 (462)
Q Consensus 324 pdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI 403 (462)
-.++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~ 78 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESP-------------TLT----FEEHEKVIEFAVKRAAGRIKVIAGTGG 78 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 346677899999999999999999988773211 111 122356777778877778998755555
Q ss_pred CCHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 404 SSGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 404 ~s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
.+-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 79 ~~t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 110 (294)
T 2ehh_A 79 NATHEAVHLTAHAKEVGADGALVVVPYYN-KPT 110 (294)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCC
Confidence 5666666554 479999999999844 463
No 295
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=95.55 E-value=0.076 Score=52.62 Aligned_cols=89 Identities=17% Similarity=0.313 Sum_probs=65.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpViaGvg~~~ 87 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESP-------------TLT----HDEELELFAAVQKVVNGRVPLIAGVGTND 87 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHSCSSSCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEeCCCcC
Confidence 5556899999999999999999988873211 111 12235778888888888999887666667
Q ss_pred HHHHHHHH----HhCC-CEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGA-TLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGA-d~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|| |.|++.+...+ .|.
T Consensus 88 t~~ai~la~~A~~~Ga~davlv~~P~y~-~~s 118 (311)
T 3h5d_A 88 TRDSIEFVKEVAEFGGFAAGLAIVPYYN-KPS 118 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEECCCSS-CCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCCC-CCC
Confidence 77777765 3587 99999999854 464
No 296
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.54 E-value=0.079 Score=52.49 Aligned_cols=85 Identities=11% Similarity=0.064 Sum_probs=62.3
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+ +++|||+.-|=.+
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Lt----~~Er~~v~~~~v~~~-grvpViaGvg~~~ 87 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGILGEAP-------------KLD----AAEAEAVATRFIKRA-KSMQVIVGVSAPG 87 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGGGTGG-------------GSC----HHHHHHHHHHHHHHC-TTSEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccCcChh-------------hCC----HHHHHHHHHHHHHHc-CCCcEEEecCCCC
Confidence 5567889999999999999999887763211 111 122357778888888 7899887555566
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhc
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYG 429 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~ 429 (462)
-+++.+.. ++|||.|++.+.+ |.
T Consensus 88 t~~ai~la~~A~~~Gadavlv~~P~-~~ 114 (313)
T 3dz1_A 88 FAAMRRLARLSMDAGAAGVMIAPPP-SL 114 (313)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCT-TC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC-CC
Confidence 77776655 4799999999987 54
No 297
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.51 E-value=0.064 Score=53.01 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=63.0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+--|=.+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 94 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSNGEFP-------------FLT----SSERLEVVSRVRQAMPKNRLLLAGSGCES 94 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGGGTGG-------------GSC----HHHHHHHHHHHHHTSCTTSEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchh-------------hCC----HHHHHHHHHHHHHHcCCCCcEEEecCCCC
Confidence 5566889999999999999999988873211 111 12235778888888888999776445456
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhc
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYG 429 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~ 429 (462)
-+++.+.. ++|||.|++-+...+.
T Consensus 95 t~~ai~la~~A~~~Gadavlv~~P~y~~ 122 (307)
T 3s5o_A 95 TQATVEMTVSMAQVGADAAMVVTPCYYR 122 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCTTG
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 66666554 5899999999998654
No 298
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.50 E-value=0.084 Score=51.97 Aligned_cols=89 Identities=12% Similarity=0.172 Sum_probs=65.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC-CccEEEecCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG-KIPLIGCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~-~ipIIg~GGI~ 404 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++ ++|||+.-|=.
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~g~rvpviaGvg~~ 87 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESA-------------TLT----HEEHRTCIEIAVETCKGTKVKVLAGAGSN 87 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCCeEEEeCCCC
Confidence 5667899999999999999999887763211 111 12235777888888888 89988766666
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
+-+++.+.. ++|||.|++.+...+ .|.
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~~P~y~-~~s 118 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSVAPYYN-KPT 118 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC
Confidence 777777665 489999999999854 464
No 299
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=95.46 E-value=0.054 Score=54.89 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=63.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~-------------~Ls----~eEr~~vi~~~ve~~~grvpViaGvg~~s 139 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQ-------------LMS----WDEHIMLIGHTVNCFGGSIKVIGNTGSNS 139 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHHHHTTTSEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCeEEEecCCCC
Confidence 5567889999999999999999988773211 111 12234677777888888899887555556
Q ss_pred HHHHHHHHH----hCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKIR----AGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i~----aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+..+ +|||.+++.+.+ |..|.
T Consensus 140 t~eai~la~~A~~~Gadavlvv~Py-Y~k~s 169 (360)
T 4dpp_A 140 TREAIHATEQGFAVGMHAALHINPY-YGKTS 169 (360)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC-SSCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC-CCCCC
Confidence 777776653 799999999997 43453
No 300
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=95.45 E-value=0.77 Score=46.45 Aligned_cols=136 Identities=13% Similarity=0.162 Sum_probs=96.8
Q ss_pred HHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 259 YVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 259 y~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
+.++.+.+.. .+..+-+.+... +.+.-.+.+++|+++. +.+.+|+|.....++.++..++++.
T Consensus 152 ~~~~~~~~~~~G~~~~KiKvg~~---------~~~~d~~~v~avR~a~-------g~~~~l~vDaN~~~~~~~A~~~~~~ 215 (381)
T 3fcp_A 152 IAEGEKLLAEGRHRAFKLKIGAR---------ELATDLRHTRAIVEAL-------GDRASIRVDVNQAWDAATGAKGCRE 215 (381)
T ss_dssp HHHHHHHTC----CEEEEECCSS---------CHHHHHHHHHHHHHHT-------CTTCEEEEECTTCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEecCCC---------ChHHHHHHHHHHHHHc-------CCCCeEEEECCCCCCHHHHHHHHHH
Confidence 3344444442 478888887542 1223345667777654 3468899998888888899999999
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG- 416 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG- 416 (462)
+.+.++..|- . |+.+...+..+++++.+ .+||++...+.+.+|+.+.++.|
T Consensus 216 l~~~~i~~iE-------e-------------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~~a 267 (381)
T 3fcp_A 216 LAAMGVDLIE-------Q-------------------PVSAHDNAALVRLSQQI--ETAILADEAVATAYDGYQLAQQGF 267 (381)
T ss_dssp HHHTTCSEEE-------C-------------------CBCTTCHHHHHHHHHHS--SSEEEESTTCCSHHHHHHHHHTTC
T ss_pred HhhcCcccee-------C-------------------CCCcccHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHcCC
Confidence 9999877652 1 12223467788899988 79999999999999999999976
Q ss_pred CCEEEEchhhhhcCCChHHHHHH
Q 012517 417 ATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~~ 439 (462)
+|.||+--+-+ .|..-..+|.+
T Consensus 268 ~d~v~~k~~~~-GGit~~~~ia~ 289 (381)
T 3fcp_A 268 TGAYALKIAKA-GGPNSVLALAR 289 (381)
T ss_dssp CSEEEECHHHH-TSTTHHHHHHH
T ss_pred CCEEEeccccc-CCHHHHHHHHH
Confidence 99999987774 57766666543
No 301
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.44 E-value=0.11 Score=50.53 Aligned_cols=74 Identities=15% Similarity=0.017 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..++|+..++.|+++|.+. |.. +. +.-+.+.++.+++.+ ++||+.-+.|.+..++
T Consensus 73 ~p~~~A~~y~~~GA~~isvl-td~---------------~~------f~Gs~~~l~~ir~~v--~lPvl~kdfiid~~qv 128 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVV-TEQ---------------RR------FQGSLDDLDAVRASV--SIPVLRKDFVVQPYQI 128 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEE-CCG---------------GG------HHHHHHHHHHHHHHC--SSCEEEESCCCSHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEe-cCh---------------hh------cCCCHHHHHHHHHhC--CCCEEECccccCHHHH
Confidence 67899999999999999864 321 11 112578899999998 7999999999999999
Q ss_pred HHHHHhCCCEEEEchhhh
Q 012517 410 YRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali 427 (462)
.+...+|||.|-+..+.+
T Consensus 129 ~~A~~~GAD~VlLi~a~l 146 (272)
T 3qja_A 129 HEARAHGADMLLLIVAAL 146 (272)
T ss_dssp HHHHHTTCSEEEEEGGGS
T ss_pred HHHHHcCCCEEEEecccC
Confidence 999999999999988764
No 302
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.43 E-value=0.12 Score=50.64 Aligned_cols=76 Identities=22% Similarity=0.301 Sum_probs=53.4
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
.++|.|=+ + .+.+. +.+.+.|+|.|.+.|-+. ..++++.+.++++
T Consensus 196 ~~~IgVev--~----t~eea-~eA~~aGaD~I~ld~~~~----------------------------~~~k~av~~v~~~ 240 (286)
T 1x1o_A 196 YLKVEVEV--R----SLEEL-EEALEAGADLILLDNFPL----------------------------EALREAVRRVGGR 240 (286)
T ss_dssp TSCEEEEE--S----SHHHH-HHHHHHTCSEEEEESCCH----------------------------HHHHHHHHHHTTS
T ss_pred CCEEEEEe--C----CHHHH-HHHHHcCCCEEEECCCCH----------------------------HHHHHHHHHhCCC
Confidence 45777733 1 23333 445578999998887431 2233444444457
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+|+.++|||+ .+.+.++.++|+|.|.+++..
T Consensus 241 ipi~AsGGIt-~eni~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 241 VPLEASGNMT-LERAKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp SCEEEESSCC-HHHHHHHHHHTCSEEECTHHH
T ss_pred CeEEEEcCCC-HHHHHHHHHcCCCEEEEcHHH
Confidence 9999999996 999999999999999996644
No 303
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.36 E-value=0.11 Score=49.14 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=63.2
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec-----C
Q 012517 328 KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG-----G 402 (462)
Q Consensus 328 ~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G-----G 402 (462)
.+++.++|+++.+.|+.||.+. +.+.++++++.+ ++|||+.= |
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~~------------------------------~~~~i~~ir~~v--~~Pvig~~k~~~~~ 82 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRIE------------------------------GIENLRTVRPHL--SVPIIGIIKRDLTG 82 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE------------------------------SHHHHHHHGGGC--CSCEEEECBCCCSS
T ss_pred cchHHHHHHHHHHCCCcEEEEC------------------------------CHHHHHHHHHhc--CCCEEEEEeecCCC
Confidence 4688999999999999998762 246789999999 79998632 2
Q ss_pred --C---CCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHH
Q 012517 403 --I---SSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAE 443 (462)
Q Consensus 403 --I---~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~ 443 (462)
+ .+.+++.+.+++|||.|-+.++... .|..+.++.+...+
T Consensus 83 ~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~-~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 83 SPVRITPYLQDVDALAQAGADIIAFDASFRS-RPVDIDSLLTRIRL 127 (229)
T ss_dssp CCCCBSCSHHHHHHHHHHTCSEEEEECCSSC-CSSCHHHHHHHHHH
T ss_pred CceEeCccHHHHHHHHHcCCCEEEECccccC-ChHHHHHHHHHHHH
Confidence 2 2567999999999999998887643 57766666555443
No 304
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=95.31 E-value=0.35 Score=47.30 Aligned_cols=140 Identities=18% Similarity=0.145 Sum_probs=85.2
Q ss_pred HHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCc
Q 012517 265 TLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLD 344 (462)
Q Consensus 265 ~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~Gvd 344 (462)
.+.+++|++.|= -+.+++.+ +++++-+ .++||++|-....+.+|+...++.+.+.|.+
T Consensus 106 ~l~~~vd~lqIg--------A~~~~n~~----LLr~va~----------~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~ 163 (285)
T 3sz8_A 106 PVAEIADVLQVP--------AFLARQTD----LVVAIAK----------AGKPVNVKKPQFMSPTQLKHVVSKCGEVGND 163 (285)
T ss_dssp HHHTTCSEEEEC--------GGGTTCHH----HHHHHHH----------TSSCEEEECCTTSCGGGTHHHHHHHHHTTCC
T ss_pred HHHHhCCEEEEC--------ccccCCHH----HHHHHHc----------cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCC
Confidence 344568988872 23344444 4555432 3789999998877888999999999999988
Q ss_pred EEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe-----------cCCCCH------H
Q 012517 345 GLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC-----------GGISSG------E 407 (462)
Q Consensus 345 gIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~-----------GGI~s~------~ 407 (462)
-|++.-.+...+ .+-....++.+..+++.++ ++||+.. ||...+ .
T Consensus 164 ~i~L~erg~~y~-----------------~~~~~vdl~~i~~lk~~~~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~ 225 (285)
T 3sz8_A 164 RVMLCERGSSFG-----------------YDNLVVDMLGFRQMAETTG-GCPVIFDVTHSLQCRDPLGDASGGRRRQVLD 225 (285)
T ss_dssp CEEEEECCEECS-----------------SSCEECCTTHHHHHHHHTT-SCCEEEETTTTCC---------------HHH
T ss_pred cEEEEeCCCCCC-----------------CCcCccCHHHHHHHHHhCC-CCCEEEeCCCccccCCCcCCCCCCchhhHHH
Confidence 888875442211 0111135667778888873 3899872 222233 3
Q ss_pred HHHHHHHhCCCEEEEchhh-----hhcC-----CChHHHHHHHHHHH
Q 012517 408 DAYRKIRAGATLVQLYTAF-----AYGG-----PALIPQIKAELAEC 444 (462)
Q Consensus 408 dA~e~i~aGAd~Vqv~Tal-----i~~G-----P~~i~~i~~~L~~~ 444 (462)
-+...+.+||+.+.|=+-+ +-.| |+-++++.+++++.
T Consensus 226 ~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~i 272 (285)
T 3sz8_A 226 LARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKAI 272 (285)
T ss_dssp HHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHHH
Confidence 5778889999944442211 0122 45566666666553
No 305
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.30 E-value=0.069 Score=54.25 Aligned_cols=70 Identities=23% Similarity=0.277 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.++|+|.|++. +.. |. .+..++.++++++..+ ++|||+ |.+.|.++|
T Consensus 108 ~~~~~~~~lieaGvd~I~id-ta~----------------G~-----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~t~e~A 163 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLID-SSH----------------GH-----SEGVLQRIRETRAAYP-HLEIIG-GNVATAEGA 163 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEE-CSC----------------TT-----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHH
T ss_pred hHHHHHHHHHhCCCCEEEEe-CCC----------------CC-----CHHHHHHHHHHHHhcC-CCceEe-eeeCCHHHH
Confidence 34567889999999988763 321 11 1234677889998875 577765 679999999
Q ss_pred HHHHHhCCCEEEEc
Q 012517 410 YRKIRAGATLVQLY 423 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~ 423 (462)
.+++++|||.|-++
T Consensus 164 ~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 164 RALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCEEEEe
Confidence 99999999999993
No 306
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=95.29 E-value=0.5 Score=45.51 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-HH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-ED 408 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~d 408 (462)
.+..+++.+.++|+||++++- .-++.+|+.++.++ ++.+.||.-. .+
T Consensus 163 ~V~~~A~~a~~aG~~GvV~sa-------------------------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~ 210 (255)
T 3ldv_A 163 HVLRLATLTKNAGLDGVVCSA-------------------------------QEASLLKQHLGREF-KLVTPGIRPAGSE 210 (255)
T ss_dssp HHHHHHHHHHHTTCSEEECCH-------------------------------HHHHHHHHHHCTTS-EEEEECCCCTTST
T ss_pred HHHHHHHHHHHcCCCEEEECH-------------------------------HHHHHHHHhcCCCc-EEEeCCcccCcCC
Confidence 345677777889999998651 12567778776555 5667777631 12
Q ss_pred ---------HHHHHHhCCCEEEEchhhhhcCCC
Q 012517 409 ---------AYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 409 ---------A~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
..+.+++|||.+-++|++. +.++
T Consensus 211 ~~dQ~Rv~t~~~a~~aGad~iVvGr~I~-~a~d 242 (255)
T 3ldv_A 211 QGDQRRIMTPAQAIASGSDYLVIGRPIT-QAAH 242 (255)
T ss_dssp TSSCSSSCCHHHHHHTTCSEEEECHHHH-TCSC
T ss_pred ccceeccCCHHHHHHcCCCEEEECHHHh-CCCC
Confidence 4577789999999999984 4454
No 307
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.28 E-value=1.3 Score=44.13 Aligned_cols=125 Identities=6% Similarity=0.026 Sum_probs=80.9
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEe--cCCCChhhHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKI--APDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKi--spdl~~~~~~~ia 335 (462)
++++.+...+ +|.+.|.+++- +.+...++++.+++. ...+.+=+ ++..+.+.+.+++
T Consensus 97 ~~i~~a~~aG--vd~v~I~~~~s---------~~~~~~~~i~~ak~~----------G~~v~~~~~~a~~~~~e~~~~ia 155 (345)
T 1nvm_A 97 HDLKNAYQAG--ARVVRVATHCT---------EADVSKQHIEYARNL----------GMDTVGFLMMSHMIPAEKLAEQG 155 (345)
T ss_dssp HHHHHHHHHT--CCEEEEEEETT---------CGGGGHHHHHHHHHH----------TCEEEEEEESTTSSCHHHHHHHH
T ss_pred HHHHHHHhCC--cCEEEEEEecc---------HHHHHHHHHHHHHHC----------CCEEEEEEEeCCCCCHHHHHHHH
Confidence 3444444444 89988865431 113445556655543 23444445 6667778899999
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe----cCCCCHHHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC----GGISSGEDAYR 411 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~----GGI~s~~dA~e 411 (462)
+.+.+.|++.|.+..|+- ... .....+.++.+++.+++++||-.= -|.. -..++.
T Consensus 156 ~~~~~~Ga~~i~l~DT~G----------------~~~----P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~a-vAn~la 214 (345)
T 1nvm_A 156 KLMESYGATCIYMADSGG----------------AMS----MNDIRDRMRAFKAVLKPETQVGMHAHHNLSLG-VANSIV 214 (345)
T ss_dssp HHHHHHTCSEEEEECTTC----------------CCC----HHHHHHHHHHHHHHSCTTSEEEEECBCTTSCH-HHHHHH
T ss_pred HHHHHCCCCEEEECCCcC----------------ccC----HHHHHHHHHHHHHhcCCCceEEEEECCCccHH-HHHHHH
Confidence 999999999998887752 111 123568889999998546777652 1322 445677
Q ss_pred HHHhCCCEEEEch
Q 012517 412 KIRAGATLVQLYT 424 (462)
Q Consensus 412 ~i~aGAd~Vqv~T 424 (462)
.+++||+.|...-
T Consensus 215 A~~aGa~~vd~tv 227 (345)
T 1nvm_A 215 AVEEGCDRVDASL 227 (345)
T ss_dssp HHHTTCCEEEEBG
T ss_pred HHHcCCCEEEecc
Confidence 7889999988764
No 308
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.20 E-value=0.3 Score=47.83 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhh
Q 012517 252 SEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~ 330 (462)
++++.+-+.+-++.+.+ .+|+|++-+..|... -+.+.+.+|+++. ...++.+--+-|... +
T Consensus 106 s~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~-----iD~~~~~~Li~~a------------~~l~vTFHRAFD~~~-d 167 (287)
T 3iwp_A 106 SDREIEVMKADIRLAKLYGADGLVFGALTEDGH-----IDKELCMSLMAIC------------RPLPVTFHRAFDMVH-D 167 (287)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSC-----BCHHHHHHHHHHH------------TTSCEEECGGGGGCS-C
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCC-----cCHHHHHHHHHHc------------CCCcEEEECchhccC-C
Confidence 56665544444444444 399999988766521 2345555665543 246777666656543 3
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
..+-.+.+.+.|+|-|-.++.. +. -...++.++++.+..+++|+|++-|||+ .+.+.
T Consensus 168 ~~~Ale~Li~lGvdrILTSG~~---~~-------------------a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~ 224 (287)
T 3iwp_A 168 PMAALETLLTLGFERVLTSGCD---SS-------------------ALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQ 224 (287)
T ss_dssp HHHHHHHHHHHTCSEEEECTTS---SS-------------------TTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHH
T ss_pred HHHHHHHHHHcCCCEEECCCCC---CC-------------------hHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHH
Confidence 4455677777899998765431 10 1124677788877777789999999996 67778
Q ss_pred HHHH-hCCCEEEEc
Q 012517 411 RKIR-AGATLVQLY 423 (462)
Q Consensus 411 e~i~-aGAd~Vqv~ 423 (462)
+.++ +|++.+-+.
T Consensus 225 ~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 225 RILEGSGATEFHCS 238 (287)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHHhhCCCEEeEC
Confidence 8877 999887664
No 309
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=95.18 E-value=0.019 Score=56.60 Aligned_cols=32 Identities=9% Similarity=0.100 Sum_probs=24.2
Q ss_pred CccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 394 KIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 394 ~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+++|.++||| +.+.+.+++++|+|.+.+++.+
T Consensus 249 ~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 249 HFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp CCEEEEECCC-CC------CCCSCSEEECGGGT
T ss_pred CeEEEEECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 3899999999 8999999999999999999985
No 310
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.06 E-value=0.14 Score=51.11 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=58.9
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcC--CcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALR--LDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~G--vdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~ 392 (462)
..|+.+-+.. .. +..+.++.+.+.| ++.|.+ |... | ..+...+.++.+++.++
T Consensus 94 g~~v~v~~g~--~~-~~~~~a~~~~~~g~~~~~i~i-~~~~---------------G------~~~~~~~~i~~lr~~~~ 148 (336)
T 1ypf_A 94 GLIASISVGV--KE-DEYEFVQQLAAEHLTPEYITI-DIAH---------------G------HSNAVINMIQHIKKHLP 148 (336)
T ss_dssp TCCCEEEECC--SH-HHHHHHHHHHHTTCCCSEEEE-ECSS---------------C------CSHHHHHHHHHHHHHCT
T ss_pred CCeEEEeCCC--CH-HHHHHHHHHHhcCCCCCEEEE-ECCC---------------C------CcHHHHHHHHHHHHhCC
Confidence 4588887643 22 3345678888999 898865 3310 1 12346788999999984
Q ss_pred CCccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 393 GKIPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 393 ~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
.|++..|+|.+.++|..++++|||.|-+.
T Consensus 149 --~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 149 --ESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp --TSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred --CCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 34555677999999999999999999993
No 311
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.01 E-value=0.084 Score=51.72 Aligned_cols=88 Identities=25% Similarity=0.343 Sum_probs=61.2
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE-EecCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI-GCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII-g~GGI~ 404 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++||| |+|+.
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~gr~pviaGvg~~- 79 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESP-------------TLS----KSEHEQVVEITIKTANGRVPVIAGAGSN- 79 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGG-------------GSC----HHHHHHHHHHHHHHHTTSSCBEEECCCS-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCCCCcEEEecCCc-
Confidence 5667899999999999999999877763211 111 1223567777777777788876 55554
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
+-+++.+.. ++|||.|++.+.+.+ .|.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~-~~s 110 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYN-KPT 110 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSS-CCC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC
Confidence 555665544 479999999999844 453
No 312
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.00 E-value=0.014 Score=53.86 Aligned_cols=41 Identities=12% Similarity=0.257 Sum_probs=35.1
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++++++ + ++|||+.|+|.+.||+.+ +++||++|.-++--++
T Consensus 142 ~~I~~v---~--~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 142 KVARKI---P--GRTVIAAGLVETEEEARE-ILKHVSAISTSSRILW 182 (188)
T ss_dssp HHHTTS---T--TSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHH
T ss_pred HHHHHh---c--CCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHh
Confidence 555555 4 799999999999999999 9999999998876655
No 313
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.82 E-value=0.22 Score=49.20 Aligned_cols=125 Identities=16% Similarity=0.211 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS 372 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS 372 (462)
+.+++..++..++. .+.||++-+.-.. +.+++.+.++.+.++|++||.+=..+. ....|-+.
T Consensus 74 ~~em~~~~~~I~r~------~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~-----------~krcGh~~ 136 (305)
T 3ih1_A 74 STEVAERARDLVRA------TDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQL-----------PKKCGHLN 136 (305)
T ss_dssp HHHHHHHHHHHHHH------HCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCS-----------SCCTTCTT
T ss_pred HHHHHHHHHHHHHh------cCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCC-----------CcccCCCC
Confidence 44555555544432 2689999987654 335677888889999999998765431 01245566
Q ss_pred CCcCccch--HHHHHHHHHhcCCCccEEEecCCCCH---------HHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 373 GKPLLSLS--NNILKEMYLLTRGKIPLIGCGGISSG---------EDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 373 G~~l~~~a--l~~v~~i~~~~~~~ipIIg~GGI~s~---------~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
|+.+.+.. .+.|+.+++. ..+++..+..... +++..+.++|||+|.+=.. ..+..++++.+++
T Consensus 137 gk~l~~~~e~~~rI~Aa~~A---~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~---~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 137 GKKLVTTEELVQKIKAIKEV---APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL---QSEEEFRLFNSKV 210 (305)
T ss_dssp CCCBCCHHHHHHHHHHHHHH---CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC---CSHHHHHHHHHHS
T ss_pred CCcccCHHHHHHHHHHHHHc---CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC---CCHHHHHHHHHHc
Confidence 78887765 3444444444 2344444444432 4556677899999987432 2344555655554
No 314
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=94.78 E-value=0.61 Score=48.32 Aligned_cols=127 Identities=7% Similarity=-0.075 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhh
Q 012517 252 SEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330 (462)
Q Consensus 252 t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~ 330 (462)
+++ ++++.+++.. ..+..+-+++.+ +.+.-.+.+++|+++. +.+.+|+|.....++.++
T Consensus 201 ~~e---~~~~~a~~~~~~Gf~~~KlKvG~----------~~~~d~~~v~avR~a~-------G~~~~l~vDaN~~~~~~~ 260 (441)
T 4a35_A 201 SDD---TLKQLCAQALKDGWTRFKVKVGA----------DLQDDMRRCQIIRDMI-------GPEKTLMMDANQRWDVPE 260 (441)
T ss_dssp CHH---HHHHHHHHHHHTTCCEEEEECSS----------CHHHHHHHHHHHHHHH-------CTTSEEEEECTTCCCHHH
T ss_pred CHH---HHHHHHHHHHHCCCCEEEEcCCC----------CHHHHHHHHHHHHHHh-------CCCCeEEEECCCCCCHHH
Confidence 565 5555555443 468999999854 1233345667777665 457899999988888888
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh---cCCCccEEEecCCCCHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL---TRGKIPLIGCGGISSGE 407 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~---~~~~ipIIg~GGI~s~~ 407 (462)
..++++.+.+.++..|- . |+.+...+..+++++. + .+||.+.--+.+..
T Consensus 261 A~~~~~~L~~~~~~~iE-------e-------------------P~~~~d~~~~~~l~~~l~~~--~iPIa~gE~~~~~~ 312 (441)
T 4a35_A 261 AVEWMSKLAKFKPLWIE-------E-------------------PTSPDDILGHATISKALVPL--GIGIATGEQCHNRV 312 (441)
T ss_dssp HHHHHHHHGGGCCSEEE-------C-------------------CSCTTCHHHHHHHHHHHGGG--TCEEEECTTCCSHH
T ss_pred HHHHHHhhcccCccEEe-------C-------------------CCCcccHHHHHHHHHhccCC--CCCEEeCCccccHH
Confidence 89999999998877651 1 1122235566777776 5 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEchhh
Q 012517 408 DAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 408 dA~e~i~aG-Ad~Vqv~Tal 426 (462)
|+.++++.| +|.||+--+.
T Consensus 313 ~~~~~l~~~a~div~~d~~~ 332 (441)
T 4a35_A 313 IFKQLLQAKALQFLQIDSCR 332 (441)
T ss_dssp HHHHHHHTTCCSEECCCTTT
T ss_pred HHHHHHHcCCCCEEEECccc
Confidence 999999987 8999986655
No 315
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=94.77 E-value=0.19 Score=49.99 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=54.8
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
.|+.|=+. .+.+ ++.+.++|+|+|-+-|.+ .+.++++.+.+++++
T Consensus 232 ~kIeVEVd------tlde-a~eAl~aGaD~I~LDn~~----------------------------~~~l~~av~~l~~~v 276 (320)
T 3paj_A 232 KPVEVETE------TLAE-LEEAISAGADIIMLDNFS----------------------------LEMMREAVKINAGRA 276 (320)
T ss_dssp SCEEEEES------SHHH-HHHHHHTTCSEEEEESCC----------------------------HHHHHHHHHHHTTSS
T ss_pred CeEEEEEC------CHHH-HHHHHHcCCCEEEECCCC----------------------------HHHHHHHHHHhCCCC
Confidence 46666442 2333 344556899999887742 244556666666689
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+|.++|||+ .+.+.++.++|+|.+.+++..
T Consensus 277 ~ieaSGGIt-~~~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 277 ALENSGNIT-LDNLKECAETGVDYISVGALT 306 (320)
T ss_dssp EEEEESSCC-HHHHHHHHTTTCSEEECTHHH
T ss_pred eEEEECCCC-HHHHHHHHHcCCCEEEECcee
Confidence 999999996 999999999999999998843
No 316
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=94.67 E-value=0.33 Score=47.68 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=82.6
Q ss_pred ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEE
Q 012517 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLI 347 (462)
Q Consensus 268 ~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIi 347 (462)
+++|++.|- -+.+++.+ +++++.+ ..+||++|-..+.+.+++...++.+...|.+-++
T Consensus 107 ~~vd~~kIg--------A~~~~n~~----Ll~~~a~----------~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~ 164 (292)
T 1o60_A 107 DVVDIIQLP--------AFLARQTD----LVEAMAK----------TGAVINVKKPQFLSPSQMGNIVEKIEECGNDKII 164 (292)
T ss_dssp TTCSEEEEC--------GGGTTCHH----HHHHHHH----------TTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEE
T ss_pred hcCCEEEEC--------cccccCHH----HHHHHHc----------CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 457888873 23344434 5555542 3789999999887888999999999999986666
Q ss_pred EecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE-----------ecCCCCH------HHHH
Q 012517 348 ISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG-----------CGGISSG------EDAY 410 (462)
Q Consensus 348 vsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg-----------~GGI~s~------~dA~ 410 (462)
+.-.+... +.+.....++.+..+++..+ .+||+. +|+-..+ .-+.
T Consensus 165 L~~rg~~~-----------------~y~~~~~dl~~i~~lk~~~~-~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~ 226 (292)
T 1o60_A 165 LCDRGTNF-----------------GYDNLIVDMLGFSVMKKASK-GSPVIFDVTHSLQCRDPFGAASSGRRAQVTELAR 226 (292)
T ss_dssp EEECCEEC-----------------STTCEECCTTHHHHHHHHTT-SCCEEEEHHHHCC------------CTTHHHHHH
T ss_pred EEECCCCC-----------------CCCccccCHHHHHHHHhhCC-CCCEEEECCCcccccCccccCCCCChhHHHHHHH
Confidence 65432110 11111135566677888763 478887 3444444 4555
Q ss_pred HHHHhCCCEEEEchhh-----hhcC-----CChHHHHHHHHHHH
Q 012517 411 RKIRAGATLVQLYTAF-----AYGG-----PALIPQIKAELAEC 444 (462)
Q Consensus 411 e~i~aGAd~Vqv~Tal-----i~~G-----P~~i~~i~~~L~~~ 444 (462)
..+.+||+.++|=+-+ +-.| |+-++++.+++++.
T Consensus 227 aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l~~lv~~ir~i 270 (292)
T 1o60_A 227 SGLAVGIAGLFLEAHPNPNQAKCDGPSALPLSALEGFVSQMKAI 270 (292)
T ss_dssp HHHHHCCSEEEEEEESSGGGCSSCCTTCEEGGGHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEecCCcccCCchhhcCCCHHHHHHHHHHHHHH
Confidence 7778999966665543 1123 45567777766643
No 317
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.65 E-value=0.43 Score=43.67 Aligned_cols=117 Identities=11% Similarity=0.054 Sum_probs=70.5
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCC--CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE--EecCCCChhhHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNT--PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV--KIAPDLSKEDLED 333 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt--~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v--Kispdl~~~~~~~ 333 (462)
+-.+.++.+..++|.+++.+ ||. .| .++++.+++.. .+.||++ |+... ...
T Consensus 14 ~~~~~~~~~~~~~diie~G~--p~~~~~g----------~~~i~~ir~~~--------~~~~i~~~~~~~~~-----~~~ 68 (211)
T 3f4w_A 14 EAMVFMDKVVDDVDIIEVGT--PFLIREG----------VNAIKAIKEKY--------PHKEVLADAKIMDG-----GHF 68 (211)
T ss_dssp HHHHHHHHHGGGCSEEEECH--HHHHHHT----------THHHHHHHHHC--------TTSEEEEEEEECSC-----HHH
T ss_pred HHHHHHHHhhcCccEEEeCc--HHHHhcc----------HHHHHHHHHhC--------CCCEEEEEEEeccc-----hHH
Confidence 44555566656899999976 551 12 25566666541 3578865 55531 234
Q ss_pred HHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE-EecCCCCH-HHHHH
Q 012517 334 IAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI-GCGGISSG-EDAYR 411 (462)
Q Consensus 334 ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII-g~GGI~s~-~dA~e 411 (462)
+++.+.++|+|+|++..... .+...++++.+++. .++++ .+=+..++ +.+.+
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~-----------------------~~~~~~~~~~~~~~---g~~~~v~~~~~~t~~~~~~~ 122 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTD-----------------------VLTIQSCIRAAKEA---GKQVVVDMICVDDLPARVRL 122 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSC-----------------------HHHHHHHHHHHHHH---TCEEEEECTTCSSHHHHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCC-----------------------hhHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHHH
Confidence 58889999999999863210 00112344445444 24443 33456666 55788
Q ss_pred HHHhCCCEEEEchh
Q 012517 412 KIRAGATLVQLYTA 425 (462)
Q Consensus 412 ~i~aGAd~Vqv~Ta 425 (462)
..++|++.|.+..+
T Consensus 123 ~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 123 LEEAGADMLAVHTG 136 (211)
T ss_dssp HHHHTCCEEEEECC
T ss_pred HHHcCCCEEEEcCC
Confidence 88899999877544
No 318
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.60 E-value=0.2 Score=52.40 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=60.7
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
..+...+++.. ...+.++.+.+.|+|.|++... +|. ....++.++++++.++ ++
T Consensus 222 ~~vg~~i~~~~---~~~~~a~~l~~~G~d~ivi~~a-----------------~g~-----~~~~~~~i~~l~~~~p-~~ 275 (491)
T 1zfj_A 222 LLVAAAVGVTS---DTFERAEALFEAGADAIVIDTA-----------------HGH-----SAGVLRKIAEIRAHFP-NR 275 (491)
T ss_dssp BCCEEEECSST---THHHHHHHHHHHTCSEEEECCS-----------------CTT-----CHHHHHHHHHHHHHCS-SS
T ss_pred EEEEEeccCch---hHHHHHHHHHHcCCCeEEEeee-----------------cCc-----chhHHHHHHHHHHHCC-CC
Confidence 44555555432 3456688888999999987631 111 1235678889999885 79
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
|++ .|+|.+.+++..++++||+.|.++
T Consensus 276 pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 276 TLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp CEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred cEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 999 999999999999999999999887
No 319
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.58 E-value=0.058 Score=53.14 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=61.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++++|||+.-|=.+
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~grvpviaGvg~~~ 84 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLGSTGEFA-------------YLG----TAQREAVVRATIEAAQRRVPVVAGVASTS 84 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTSGGGTGG-------------GCC----HHHHHHHHHHHHHHHTTSSCBEEEEEESS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcc-------------ccC----HHHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 5667889999999999999998877763211 111 12235677778888888888765444445
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+...+ .|.
T Consensus 85 t~~ai~la~~a~~~Gadavlv~~P~y~-~~~ 114 (300)
T 3eb2_A 85 VADAVAQAKLYEKLGADGILAILEAYF-PLK 114 (300)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECCSS-CCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC
Confidence 66665554 589999999999854 464
No 320
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.49 E-value=0.28 Score=49.69 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=68.1
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccC---C----CCCCCCCc------ccc-cC---CCCCCcC--
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISR---P----DPVSKNPV------AKE-TG---GLSGKPL-- 376 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r---~----~~~~~~~~------~~~-~G---GlSG~~l-- 376 (462)
.|.++.+-..-+.+...++++.+++.|++.|.++=.+... . .....+.. ... .. ...|..+
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 202 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSS 202 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHH
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHH
Confidence 6889988533345567889999999999999887443211 0 00000000 000 00 0112221
Q ss_pred ------c-cchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 012517 377 ------L-SLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 377 ------~-~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~T 424 (462)
. ...++.++++++.+ ++||+ ++|+.++++|...+++|||.|-+..
T Consensus 203 ~v~~~~~~~~~~~~i~~l~~~~--~~pv~-vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 203 YVAGQIDRSLSWKDVAWLQTIT--SLPIL-VKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp HHHHTBCTTCCHHHHHHHHHHC--CSCEE-EECCCSHHHHHHHHHTTCSEEEECC
T ss_pred HHHhhcCccchHHHHHHHHHHh--CCCEE-EEecCCHHHHHHHHHcCCCEEEECC
Confidence 1 23567899999998 68988 5889999999999999999999954
No 321
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=94.49 E-value=0.69 Score=45.30 Aligned_cols=110 Identities=16% Similarity=0.095 Sum_probs=69.3
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCC------cEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHH
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRL------DGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM 387 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~Gv------dgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i 387 (462)
.++||++|-....+.+|+...++.+.+.|. +-|++.-.+...+ +. -....++.+..+
T Consensus 130 ~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~--------------~~---~~~vdl~~i~~l 192 (288)
T 3tml_A 130 SGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFG--------------YN---NLVSDMRSLAIM 192 (288)
T ss_dssp SSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECS--------------SS---CEECCHHHHHHG
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCC--------------CC---cCcCCHHHHHHH
Confidence 478999999877777799999999999887 6677765432110 10 001256778888
Q ss_pred HHhcCCCccEEEe---------------cCCCC--HHHHHHHHHhCCCEEEEchhhh-----hc-----CCChHHHHHHH
Q 012517 388 YLLTRGKIPLIGC---------------GGISS--GEDAYRKIRAGATLVQLYTAFA-----YG-----GPALIPQIKAE 440 (462)
Q Consensus 388 ~~~~~~~ipIIg~---------------GGI~s--~~dA~e~i~aGAd~Vqv~Tali-----~~-----GP~~i~~i~~~ 440 (462)
++ + .+||+.. ||-.. ..-+...+.+||+.+.|=+-+- -. .|+-++++.++
T Consensus 193 k~-~--~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ 269 (288)
T 3tml_A 193 RE-T--NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLET 269 (288)
T ss_dssp GG-G--SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHH
T ss_pred Hh-c--CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHH
Confidence 77 6 6999872 34332 2357888899999554422210 01 25556666666
Q ss_pred HHH
Q 012517 441 LAE 443 (462)
Q Consensus 441 L~~ 443 (462)
+++
T Consensus 270 ir~ 272 (288)
T 3tml_A 270 LVT 272 (288)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 322
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=94.46 E-value=0.17 Score=49.63 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=55.1
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
.+||.|=+. .+.+ ++.+.++|+|.|-+-|.+ .+.++++.+.+.++
T Consensus 198 ~~~IeVEv~------tl~e-a~eAl~aGaD~I~LDn~~----------------------------~~~l~~av~~~~~~ 242 (287)
T 3tqv_A 198 NKVVEVEVT------NLDE-LNQAIAAKADIVMLDNFS----------------------------GEDIDIAVSIARGK 242 (287)
T ss_dssp TSCEEEEES------SHHH-HHHHHHTTCSEEEEESCC----------------------------HHHHHHHHHHHTTT
T ss_pred CCcEEEEeC------CHHH-HHHHHHcCCCEEEEcCCC----------------------------HHHHHHHHHhhcCC
Confidence 467777442 3333 344566899999988743 23455555555568
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
++|.++||| +.+.+.++.++|+|.+.+++-.
T Consensus 243 v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 243 VALEVSGNI-DRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp CEEEEESSC-CTTTHHHHHTTTCSEEECSHHH
T ss_pred ceEEEECCC-CHHHHHHHHHcCCCEEEEChhh
Confidence 999999999 5899999999999999997644
No 323
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.46 E-value=0.19 Score=45.96 Aligned_cols=83 Identities=18% Similarity=0.286 Sum_probs=61.6
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
.|+++=+.. .+.++..++++.+.+.|++.|.++..+. ...+.++++++.++.+
T Consensus 10 ~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~~-------------------------~~~~~i~~ir~~~~~~- 62 (205)
T 1wa3_A 10 HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTVP-------------------------DADTVIKELSFLKEKG- 62 (205)
T ss_dssp HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTST-------------------------THHHHHHHTHHHHHTT-
T ss_pred CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCCh-------------------------hHHHHHHHHHHHCCCC-
Confidence 366665654 3567899999999999999998764320 1245678888876422
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
.+|+.|-+.+.+++.+.+++|||.| +...+
T Consensus 63 ~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 63 AIIGAGTVTSVEQCRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp CEEEEESCCSHHHHHHHHHHTCSEE-ECSSC
T ss_pred cEEEecccCCHHHHHHHHHcCCCEE-EcCCC
Confidence 3678888999999999999999999 65443
No 324
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.33 E-value=0.18 Score=50.75 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=56.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
+|.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++. .+.+++|||+--|=.+
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-------------~Ls----~eEr~~vi~~---~~~grvpViaGvg~~s 103 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSMGDWP-------------LLT----DEQRMEGVER---LVKAGIPVIVGTGAVN 103 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGGGTGG-------------GSC----HHHHHHHHHH---HHHTTCCEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccCcChh-------------hCC----HHHHHHHHHH---HhCCCCcEEEecCCCC
Confidence 5566789999999999999999887763211 011 0112233333 3445788765555556
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhhcCCC
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~~GP~ 432 (462)
-+++.+.. ++|||.|++.+.+.+.+|.
T Consensus 104 t~eai~la~~A~~~Gadavlv~~P~y~~~~s 134 (344)
T 2hmc_A 104 TASAVAHAVHAQKVGAKGLMVIPRVLSRGSV 134 (344)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSTTC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCccCCCCC
Confidence 66666554 4799999999998543254
No 325
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=94.33 E-value=0.41 Score=45.88 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC---
Q 012517 250 KTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL--- 326 (462)
Q Consensus 250 k~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl--- 326 (462)
.++....+|+.+ .+++|.|++-+-..| ..+..++.+++.++-.++. ++++ .|.=
T Consensus 22 glg~~~~~d~Le---~~g~yID~lKfg~Gt------~~l~~~~~l~eki~l~~~~----------gV~v----~~GGTl~ 78 (251)
T 1qwg_A 22 GLPPKFVEDYLK---VCGDYIDFVKFGWGT------SAVIDRDVVKEKINYYKDW----------GIKV----YPGGTLF 78 (251)
T ss_dssp SCCHHHHHHHHH---HHGGGCSEEEECTTG------GGGSCHHHHHHHHHHHHTT----------TCEE----EECHHHH
T ss_pred CCCHHHHHHHHH---HhhhhcceEEecCce------eeecCHHHHHHHHHHHHHc----------CCeE----ECCcHHH
Confidence 356776667754 578899999997754 3356667777777766532 4444 3331
Q ss_pred ----ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 327 ----SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 327 ----~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
....+.+..+.|.+.|.|.|-+++.+...+. +.-+++|+++++.- =.++.=+ |
T Consensus 79 E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~--------------------~~~~~~I~~~~~~G--~~v~~Ev-G 135 (251)
T 1qwg_A 79 EYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISL--------------------EERNNAIKRAKDNG--FMVLTEV-G 135 (251)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCH--------------------HHHHHHHHHHHHTT--CEEEEEE-C
T ss_pred HHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCH--------------------HHHHHHHHHHHHCC--CEEeeec-c
Confidence 1236889999999999999999999865431 12356777777661 1233333 4
Q ss_pred CCCH--------H----HHHHHHHhCCCEEEEch
Q 012517 403 ISSG--------E----DAYRKIRAGATLVQLYT 424 (462)
Q Consensus 403 I~s~--------~----dA~e~i~aGAd~Vqv~T 424 (462)
..++ + .+...|+|||+.|++=.
T Consensus 136 ~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 136 KKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp CSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 4444 4 45667789999999976
No 326
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.32 E-value=0.65 Score=45.73 Aligned_cols=155 Identities=12% Similarity=0.154 Sum_probs=89.0
Q ss_pred HHHHHHcccCcEEEEec-cCC-CCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHHHHHHH
Q 012517 261 QGVHTLSQYADYLVINV-SSP-NTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLEDIAAV 337 (462)
Q Consensus 261 ~~~~~l~~~aD~leiNv-SsP-nt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~~ia~~ 337 (462)
..+++++ +|.|-+-= |.- ..-|..+.. .-.+.+++..++..++. .+.||++-+.-.. +.+++.+.++.
T Consensus 36 ~l~e~aG--f~ai~vs~~s~a~~~~G~pD~~-~vt~~em~~~~~~I~r~------~~~PviaD~d~Gyg~~~~v~~~v~~ 106 (298)
T 3eoo_A 36 KMAEAVG--FKAVYLSGGGVAANSLGIPDLG-ISTMDDVLVDANRITNA------TNLPLLVDIDTGWGGAFNIARTIRS 106 (298)
T ss_dssp HHHHHHT--CSCEEECHHHHHHHTTCCCSSS-CCCHHHHHHHHHHHHHH------CCSCEEEECTTCSSSHHHHHHHHHH
T ss_pred HHHHHcC--CCEEEECcHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHhh------cCCeEEEECCCCCCCHHHHHHHHHH
Confidence 3445544 88877731 111 112333321 12345555555555432 3689999987665 34567788888
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHH---HHhc-CCCccEEEecCCCCH-------
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEM---YLLT-RGKIPLIGCGGISSG------- 406 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i---~~~~-~~~ipIIg~GGI~s~------- 406 (462)
+.++|++||.+=..+. ....|-+.|+.+.|.. +.+.+| ++.- +.++-|++ ....-
T Consensus 107 l~~aGaagv~iEDq~~-----------~k~cGh~~gk~l~~~~-e~~~ri~Aa~~A~~~~~~~I~A--RTDa~~~~glde 172 (298)
T 3eoo_A 107 FIKAGVGAVHLEDQVG-----------QKRCGHRPGKECVPAG-EMVDRIKAAVDARTDETFVIMA--RTDAAAAEGIDA 172 (298)
T ss_dssp HHHTTCSEEEEECBCC-----------CCCTTCCCCCCBCCHH-HHHHHHHHHHHHCSSTTSEEEE--EECTHHHHHHHH
T ss_pred HHHhCCeEEEECCCCC-----------CcccCCCCCCeecCHH-HHHHHHHHHHHhccCCCeEEEE--eehhhhhcCHHH
Confidence 9999999998765431 0123556678887765 334444 3332 22344444 33332
Q ss_pred --HHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 407 --EDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 407 --~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+-+..+.++|||+|.+-.. ..++.++++.+++
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~---~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAM---KTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCC---CSHHHHHHHHHHH
T ss_pred HHHHHHhhHhcCCCEEEeCCC---CCHHHHHHHHHHc
Confidence 3344566799999977542 2456667776665
No 327
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.26 E-value=0.19 Score=53.63 Aligned_cols=66 Identities=8% Similarity=0.030 Sum_probs=49.2
Q ss_pred HHHHHHHHHhc----CCCccEEEecCCCCHHHHHHHHH--------hCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHc
Q 012517 381 NNILKEMYLLT----RGKIPLIGCGGISSGEDAYRKIR--------AGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448 (462)
Q Consensus 381 l~~v~~i~~~~----~~~ipIIg~GGI~s~~dA~e~i~--------aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~ 448 (462)
.+.++++++.+ ..++|+++.||| +++++.+.+. +||+.|.+.|+++. -++ +....+++.+.+++.
T Consensus 156 ~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~-a~d-p~~a~~~l~~~~~~~ 232 (540)
T 3nl6_A 156 TAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIA-SLD-AAKSTKILRGLIDKT 232 (540)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHT-CTT-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhc-CCC-HHHHHHHHHHHHHhC
Confidence 45566665543 127999999999 7899999998 89999999999964 355 555566677777664
Q ss_pred C
Q 012517 449 G 449 (462)
Q Consensus 449 G 449 (462)
.
T Consensus 233 ~ 233 (540)
T 3nl6_A 233 D 233 (540)
T ss_dssp B
T ss_pred C
Confidence 3
No 328
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=94.18 E-value=0.18 Score=49.73 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=47.9
Q ss_pred HHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 335 AAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 335 a~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
++.+.++|+|.|-+-|-+ .+.+++..+.+.++++|.++||| +.+.+.++.+
T Consensus 222 ~~eAl~aGaD~I~LDn~~----------------------------~~~l~~av~~i~~~v~ieaSGGI-~~~~i~~~a~ 272 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT----------------------------LDMMRDAVRVTEGRAVLEVSGGV-NFDTVRAIAE 272 (298)
T ss_dssp HHHHHHTTCEEEEEESCC----------------------------HHHHHHHHHHHTTSEEEEEESSC-STTTHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC----------------------------HHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHH
Confidence 444566899999888743 23344444444568999999999 5889999999
Q ss_pred hCCCEEEEchhh
Q 012517 415 AGATLVQLYTAF 426 (462)
Q Consensus 415 aGAd~Vqv~Tal 426 (462)
+|+|.+.+++..
T Consensus 273 tGVD~isvG~lt 284 (298)
T 3gnn_A 273 TGVDRISIGALT 284 (298)
T ss_dssp TTCSEEECGGGG
T ss_pred cCCCEEEECCee
Confidence 999999999854
No 329
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=94.16 E-value=0.16 Score=51.98 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=59.0
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCcc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ip 396 (462)
++.+-+..+ ++..+.++.+.+.|+|+|.+ |+.. |. .....+.++.+++.++ ++|
T Consensus 143 ~~~~~i~~~---~~~~~~a~~~~~~G~d~i~i-~~~~-------------------g~--~~~~~e~i~~ir~~~~-~~p 196 (404)
T 1eep_A 143 RVGAAVSID---IDTIERVEELVKAHVDILVI-DSAH-------------------GH--STRIIELIKKIKTKYP-NLD 196 (404)
T ss_dssp CCEEEECSC---TTHHHHHHHHHHTTCSEEEE-CCSC-------------------CS--SHHHHHHHHHHHHHCT-TCE
T ss_pred eEEEEeCCC---hhHHHHHHHHHHCCCCEEEE-eCCC-------------------CC--hHHHHHHHHHHHHHCC-CCe
Confidence 456666542 23456677888999999887 5431 11 1345788899999985 688
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 397 LIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 397 IIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
|+. |++.+.++|..+.++|||.|.+
T Consensus 197 viv-~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 197 LIA-GNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp EEE-EEECSHHHHHHHHTTTCSEEEE
T ss_pred EEE-cCCCcHHHHHHHHhcCCCEEEE
Confidence 886 7889999999999999999999
No 330
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=94.15 E-value=0.85 Score=46.40 Aligned_cols=139 Identities=12% Similarity=-0.003 Sum_probs=97.6
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCC-CCCCE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEE-GPPPL 318 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~-~~~Pv 318 (462)
++..+++.. +++ ++++.++++. ..+..+-+.+.++. .+.-.+.+++|+++. + .+.+|
T Consensus 155 ~~y~s~~~~--~~e---~~~~~a~~~~~~G~~~~KlKvg~~~---------~~~d~~~v~avR~a~-------gg~~~~L 213 (391)
T 4e8g_A 155 PSYYATGIG--QPD---EIARIAAEKVAEGFPRLQIKIGGRP---------VEIDIETVRKVWERI-------RGTGTRL 213 (391)
T ss_dssp ECCEEECSC--CHH---HHHHHHHHHHHTTCSEEEEECCSSC---------HHHHHHHHHHHHHHH-------TTTTCEE
T ss_pred EEeEEcCCC--CHH---HHHHHHHHHHHcCCcEEEEcCCCCC---------HHHHHHHHHHHHHHh-------CCCCCeE
Confidence 344555542 565 5555454443 45899999987531 233345677776654 3 57899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 319 LVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 319 ~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
+|.....++.++..++++.+.+.++ .| ..| . ...+..+++++.+ .+||.
T Consensus 214 ~vDaN~~w~~~~A~~~~~~L~~~~i-~i-------EeP-------~--------------~~~~~~~~l~~~~--~iPIa 262 (391)
T 4e8g_A 214 AVDGNRSLPSRDALRLSRECPEIPF-VL-------EQP-------C--------------NTLEEIAAIRGRV--QHGIY 262 (391)
T ss_dssp EEECTTCCCHHHHHHHHHHCTTSCE-EE-------ESC-------S--------------SSHHHHHHHGGGC--CSCEE
T ss_pred EEeCCCCCCHHHHHHHHHHHhhcCe-EE-------ecC-------C--------------ccHHHHHHHHhhC--CCCEE
Confidence 9999888888888888888887765 43 111 0 1346678888888 69999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCC
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPA 432 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~ 432 (462)
+.--+.+.+|+.++++.| +|.||+--+.. .|..
T Consensus 263 ~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~-GGit 296 (391)
T 4e8g_A 263 LDESGEDLSTVIRAAGQGLCDGFGMKLTRI-GGLQ 296 (391)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHH
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEEeCcccc-CCHH
Confidence 999999999999999987 89999987764 3533
No 331
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.12 E-value=0.27 Score=47.95 Aligned_cols=86 Identities=16% Similarity=0.198 Sum_probs=60.3
Q ss_pred cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 323 spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
.-.++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++ -|+|+|+
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-------------~Ls----~~Er~~v~~~~~~~~~g--vi~Gvg~ 73 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGP-------------ALS----LQEKMELTDAATSAARR--VIVQVAS 73 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGG-------------GSC----HHHHHHHHHHHHHHCSS--EEEECCC
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCC--EEEeeCC
Confidence 3346677899999999999999999888773211 111 12235777788888765 6777877
Q ss_pred CCCHHHHHHHH----HhCCCEEEEchhhhh
Q 012517 403 ISSGEDAYRKI----RAGATLVQLYTAFAY 428 (462)
Q Consensus 403 I~s~~dA~e~i----~aGAd~Vqv~Tali~ 428 (462)
..+ +++.+.. ++|||.|++.+...+
T Consensus 74 ~~t-~~ai~la~~A~~~Gadavlv~~P~y~ 102 (286)
T 2r91_A 74 LNA-DEAIALAKYAESRGAEAVASLPPYYF 102 (286)
T ss_dssp SSH-HHHHHHHHHHHHTTCSEEEECCSCSS
T ss_pred CCH-HHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 655 4444443 479999999999844
No 332
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=94.10 E-value=1.1 Score=45.17 Aligned_cols=129 Identities=12% Similarity=0.118 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHH-HcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhH
Q 012517 253 EDAAADYVQGVHT-LSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDL 331 (462)
Q Consensus 253 ~~~~~dy~~~~~~-l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~ 331 (462)
.+..+++++.+.. ....+..+-+.+.. +.+.-.+.+++|+++. +.+..|+|-....++.++.
T Consensus 142 ~~~~~~~~~~~~~~~~~Gf~~~K~k~g~----------~~~~di~~v~avr~~~-------g~~~~l~vDaN~~~~~~~A 204 (378)
T 4hpn_A 142 VDRVSDNASEMAERRAEGFHACKIKIGF----------GVEEDLRVIAAVREAI-------GPDMRLMIDANHGYTVTEA 204 (378)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEEECCS----------CHHHHHHHHHHHHHHH-------TTTSEEEEECTTCCCHHHH
T ss_pred chhHHHHHHHHHHHHHhccceecccccC----------ChHHHHHHHHHHHHhc-------CCcEEEEEecCcccCHHHH
Confidence 3444555554443 34567888877642 1233345677777665 4578888888877888888
Q ss_pred HHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHH
Q 012517 332 EDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYR 411 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e 411 (462)
.++++.+.+.++..|- .|+.+...+..+++++.+ .+||.+-=-+.+..|+.+
T Consensus 205 ~~~~~~l~~~~i~~iE--------------------------eP~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~ 256 (378)
T 4hpn_A 205 ITLGDRAAGFGIDWFE--------------------------EPVVPEQLDAYARVRAGQ--PIPVAGGETWHGRYGMWQ 256 (378)
T ss_dssp HHHHHHHGGGCCSCEE--------------------------CCSCTTCHHHHHHHHHHS--SSCEEECTTCCHHHHHHH
T ss_pred HHHHhhhhhcccchhh--------------------------cCCCccchhhhHHHHhhC--CceeeCCcCccchHhHHH
Confidence 8999999988766441 122233567788999998 799999889999999999
Q ss_pred HHHhC-CCEEEEchhh
Q 012517 412 KIRAG-ATLVQLYTAF 426 (462)
Q Consensus 412 ~i~aG-Ad~Vqv~Tal 426 (462)
+++.| +|.||+--.-
T Consensus 257 ~i~~~a~d~i~~d~~~ 272 (378)
T 4hpn_A 257 ALSAGAVDILQPDLCG 272 (378)
T ss_dssp HHHTTCCSEECCBTTT
T ss_pred HHHcCCCCEEeeCCee
Confidence 99987 7999876554
No 333
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.07 E-value=0.17 Score=51.01 Aligned_cols=105 Identities=19% Similarity=0.125 Sum_probs=69.3
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCcc---CCCC----CCCCC------cc-----cccCCCCCCcC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS---RPDP----VSKNP------VA-----KETGGLSGKPL 376 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~---r~~~----~~~~~------~~-----~~~GGlSG~~l 376 (462)
+-|.|..+=..-+.+...++++.++++|+.+|+++=-+.. |..+ ...++ .. ....++.....
T Consensus 121 ~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T 3sgz_A 121 EGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFP 200 (352)
T ss_dssp TCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CC
T ss_pred CccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhcc
Confidence 4688999877667778899999999999999998843321 1100 00000 00 00001111111
Q ss_pred -ccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 377 -LSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 377 -~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
...+.+.|+.+++.+ ++||+.- ||.+.+||....++|||.|-+
T Consensus 201 d~~~~w~~i~~lr~~~--~~PvivK-~v~~~e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 201 KASFCWNDLSLLQSIT--RLPIILK-GILTKEDAELAMKHNVQGIVV 244 (352)
T ss_dssp CTTCCHHHHHHHHHHC--CSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCHHHHHHHHHhc--CCCEEEE-ecCcHHHHHHHHHcCCCEEEE
Confidence 235678899999998 6898755 578999999999999999988
No 334
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.02 E-value=0.071 Score=52.29 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcC
Q 012517 297 LVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPL 376 (462)
Q Consensus 297 ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l 376 (462)
+..+|+++++.. +..++|.|=+. .+++ ++.+.+.|+|.|.+.|-+.
T Consensus 179 i~~av~~ar~~~----~~~~~I~VEV~------tlee-a~eA~~aGaD~I~LDn~~~----------------------- 224 (285)
T 1o4u_A 179 AERAVQEVRKII----PFTTKIEVEVE------NLED-ALRAVEAGADIVMLDNLSP----------------------- 224 (285)
T ss_dssp HHHHHHHHHTTS----CTTSCEEEEES------SHHH-HHHHHHTTCSEEEEESCCH-----------------------
T ss_pred HHHHHHHHHHhC----CCCceEEEEeC------CHHH-HHHHHHcCCCEEEECCCCH-----------------------
Confidence 455565554322 22357777432 2323 3445678999999888431
Q ss_pred ccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 377 LSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 377 ~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+...+.++.++... .+++|.++|||+ .+.+.++.++|+|.+.+++..
T Consensus 225 -e~l~~av~~l~~~~-~~v~ieASGGIt-~eni~~~a~tGVD~IsvGslt 271 (285)
T 1o4u_A 225 -EEVKDISRRIKDIN-PNVIVEVSGGIT-EENVSLYDFETVDVISSSRLT 271 (285)
T ss_dssp -HHHHHHHHHHHHHC-TTSEEEEEECCC-TTTGGGGCCTTCCEEEEGGGT
T ss_pred -HHHHHHHHHhhccC-CCceEEEECCCC-HHHHHHHHHcCCCEEEEeHHH
Confidence 01123344444432 269999999995 899999999999999999965
No 335
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.97 E-value=0.14 Score=54.29 Aligned_cols=71 Identities=23% Similarity=0.237 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+-++++.++|+|.|++- +.. |.| ...++.++.+++..+ +++|| .|.|.|++.|
T Consensus 281 d~~eR~~aLv~AGvD~iviD-~ah----------------Ghs-----~~v~~~i~~ik~~~p-~~~vi-aGNVaT~e~a 336 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLD-SSQ----------------GNS-----VYQIEFIKWIKQTYP-KIDVI-AGNVVTREQA 336 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEEC-CSC----------------CCS-----HHHHHHHHHHHHHCT-TSEEE-EEEECSHHHH
T ss_pred cHHHHHHHHHhcCCcEEEEe-ccc----------------ccc-----HHHHHHHHHHHhhCC-cceEE-eccccCHHHH
Confidence 45678889999999988763 322 111 224788899999885 67655 6899999999
Q ss_pred HHHHHhCCCEEEEch
Q 012517 410 YRKIRAGATLVQLYT 424 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~T 424 (462)
.+.+++|||.|-++-
T Consensus 337 ~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 337 AQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHTCSEEEECS
T ss_pred HHHHHcCCCEEeecC
Confidence 999999999998764
No 336
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.92 E-value=0.44 Score=43.72 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=60.8
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.||+.=|.. .+.+++.++++.+.+.|++.|.+...+. ...+.++++++.++ .
T Consensus 6 ~~~i~~~i~~-~d~~~~~~~~~~~~~~G~~~i~l~~~~~-------------------------~~~~~i~~i~~~~~-~ 58 (212)
T 2v82_A 6 KLPLIAILRG-ITPDEALAHVGAVIDAGFDAVEIPLNSP-------------------------QWEQSIPAIVDAYG-D 58 (212)
T ss_dssp SSCEEEECTT-CCHHHHHHHHHHHHHHTCCEEEEETTST-------------------------THHHHHHHHHHHHT-T
T ss_pred CCCEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEeCCCh-------------------------hHHHHHHHHHHhCC-C
Confidence 4577665543 3456888999999999999998864320 12456777777663 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~T 424 (462)
--+|+.|++.+.+++..++++|||.|.+..
T Consensus 59 ~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 59 KALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp TSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred CeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 236788999999999999999999997443
No 337
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=93.88 E-value=0.22 Score=47.16 Aligned_cols=59 Identities=25% Similarity=0.166 Sum_probs=45.8
Q ss_pred HHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHH
Q 012517 385 KEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446 (462)
Q Consensus 385 ~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~ 446 (462)
+.+++. ..+++|+.-|||.+.+|+..+...|+|.+-|+++++. +.-+.++.++|...|.
T Consensus 165 ~~ir~~-~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~--a~~~~~~i~~l~~~~~ 223 (226)
T 1w0m_A 165 GLVSRH-FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVK--AKDPYAKIVELAKPLS 223 (226)
T ss_dssp HHHHHH-CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT--CSSHHHHHHHHHHHHH
T ss_pred HHHHhc-cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHC--CcCHHHHHHHHHHHHH
Confidence 344443 3479999999999999999999999999999999985 4445566666665554
No 338
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=93.82 E-value=0.27 Score=48.43 Aligned_cols=76 Identities=11% Similarity=0.145 Sum_probs=54.2
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
..||.|=+. .+++ ++.+.++|+|.|-+-|-+ .+.++++.+.++++
T Consensus 207 ~~kIeVEv~------tl~e-~~eAl~aGaDiImLDn~s----------------------------~~~l~~av~~~~~~ 251 (300)
T 3l0g_A 207 NEYIAIECD------NISQ-VEESLSNNVDMILLDNMS----------------------------ISEIKKAVDIVNGK 251 (300)
T ss_dssp SCCEEEEES------SHHH-HHHHHHTTCSEEEEESCC----------------------------HHHHHHHHHHHTTS
T ss_pred CCCEEEEEC------CHHH-HHHHHHcCCCEEEECCCC----------------------------HHHHHHHHHhhcCc
Confidence 356666442 3333 344566899999887743 23445555555568
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+.|.++||| +.+.+.++.++|+|.+.+++..
T Consensus 252 v~leaSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 252 SVLEVSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp SEEEEESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred eEEEEECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 999999999 5899999999999999988543
No 339
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=93.75 E-value=0.12 Score=54.47 Aligned_cols=70 Identities=24% Similarity=0.242 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.++|+|.|++. +.. |. .+...+.++++++.++ ++||++ |.|.+.++|
T Consensus 229 ~~~~~a~~l~~aG~d~I~id-~a~----------------g~-----~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a 284 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVD-TAH----------------GH-----SKGVIERVRWVKQTFP-DVQVIG-GNIATAEAA 284 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEE-CSC----------------CS-----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHH
T ss_pred chHHHHHHHhhcccceEEec-ccC----------------Cc-----chhHHHHHHHHHHHCC-CceEEE-eeeCcHHHH
Confidence 45677888889999988764 321 11 1235688999999885 678877 789999999
Q ss_pred HHHHHhCCCEEEEc
Q 012517 410 YRKIRAGATLVQLY 423 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~ 423 (462)
.+++++|||.|-++
T Consensus 285 ~~l~~aGaD~I~vg 298 (490)
T 4avf_A 285 KALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 99999999999973
No 340
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.74 E-value=0.78 Score=46.14 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=86.8
Q ss_pred Hccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCc
Q 012517 266 LSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLD 344 (462)
Q Consensus 266 l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~Gvd 344 (462)
+.++ +|++-| .| +++||-. ||+.|-+ .++||++|-... +.+|+...++.+.+.|.+
T Consensus 107 l~~~~v~~~KI--~S------~~~~N~p----LL~~va~----------~gKPviLstGms-tl~Ei~~Ave~i~~~g~~ 163 (350)
T 3g8r_A 107 IEAHGIEIIKI--AS------CSFTDWP----LLERIAR----------SDKPVVASTAGA-RREDIDKVVSFMLHRGKD 163 (350)
T ss_dssp HHHTTCCEEEE--CS------SSTTCHH----HHHHHHT----------SCSCEEEECTTC-CHHHHHHHHHHHHTTTCC
T ss_pred HHHcCCCEEEE--Cc------ccccCHH----HHHHHHh----------hCCcEEEECCCC-CHHHHHHHHHHHHHcCCC
Confidence 3344 788775 33 4455544 4445532 478999999875 788999999999988887
Q ss_pred EEEE--ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe----cCCCCHHHHHHHHHhCCC
Q 012517 345 GLII--SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC----GGISSGEDAYRKIRAGAT 418 (462)
Q Consensus 345 gIiv--sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~----GGI~s~~dA~e~i~aGAd 418 (462)
|++ +++++ | . |.....+..|..+++.++ .+||.-+ |+.. .-+...+.+||+
T Consensus 164 -viLlhC~s~Y--P----t-------------~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt~g~~~--~~~~AAvAlGA~ 220 (350)
T 3g8r_A 164 -LTIMHCVAEY--P----T-------------PDDHLHLARIKTLRQQYA-GVRIGYSTHEDPDLM--EPIMLAVAQGAT 220 (350)
T ss_dssp -EEEEECCCCS--S----C-------------CGGGCCTTHHHHHHHHCT-TSEEEEEECCCSSCC--HHHHHHHHTTCC
T ss_pred -EEEEecCCCC--C----C-------------CcccCCHHHHHHHHHHCC-CCCEEcCCCCCCCcc--HHHHHHHHcCCC
Confidence 555 33332 1 0 113346788889999885 5888666 3332 345688899999
Q ss_pred EEEEchhhhh-cC--------CChHHHHHHHHHHHHHHcC
Q 012517 419 LVQLYTAFAY-GG--------PALIPQIKAELAECLERDG 449 (462)
Q Consensus 419 ~Vqv~Tali~-~G--------P~~i~~i~~~L~~~l~~~G 449 (462)
+|...=-+=. .| |.-++++.++++..-...|
T Consensus 221 vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG 260 (350)
T 3g8r_A 221 VFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLG 260 (350)
T ss_dssp EEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcC
Confidence 9887644322 23 3345566666655444444
No 341
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.72 E-value=0.26 Score=46.60 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=43.7
Q ss_pred HHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 382 NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 382 ~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+..+.+++. ..+++|+.-|||.+.+|+..+...|+|.+-|+++++. +.-+.++.++|.
T Consensus 165 ~~~~~ir~~-~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~--a~~~~~~i~~l~ 222 (225)
T 1hg3_A 165 NTVELVKKV-NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTK--AKDPEKAIWDLV 222 (225)
T ss_dssp HHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT--CSSHHHHHHHHH
T ss_pred HHHHHHHhc-cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHC--CcCHHHHHHHHH
Confidence 333344444 3479999999999999999999999999999999985 343445555543
No 342
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=93.62 E-value=0.26 Score=48.17 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=57.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++ -|+|+|+..+
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-------------~Ls----~eEr~~v~~~~~~~~~g--ViaGvg~~~t 77 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGTTGLGP-------------ALS----KDEKRQNLNALYDVTHK--LIFQVGSLNL 77 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETSTTTTGG-------------GSC----HHHHHHHHHHHTTTCSC--EEEECCCSCH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHhCC--eEEeeCCCCH
Confidence 5666789999999999999999888773211 111 12234667777777765 6677777654
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhh
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAY 428 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~ 428 (462)
+++.+.. ++|||.|++.+.+.+
T Consensus 78 -~~ai~la~~A~~~Gadavlv~~P~y~ 103 (288)
T 2nuw_A 78 -NDVMELVKFSNEMDILGVSSHSPYYF 103 (288)
T ss_dssp -HHHHHHHHHHHTSCCSEEEECCCCSS
T ss_pred -HHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 4455444 479999999999844
No 343
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.51 E-value=1.4 Score=40.77 Aligned_cols=133 Identities=14% Similarity=0.036 Sum_probs=77.2
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
.+.+++-- .+.+ +-.+.++.+..++|++++.+ .||.. .-.++++++++.. .+.++++.+
T Consensus 8 ~lilalD~--~~~~---~~~~~~~~~~~~vd~ie~g~-~~~~~---------~G~~~i~~lr~~~------~~~~i~ld~ 66 (218)
T 3jr2_A 8 MIQIALDQ--TNLT---DAVAVASNVASYVDVIEVGT-ILAFA---------EGMKAVSTLRHNH------PNHILVCDM 66 (218)
T ss_dssp EEEEEECC--SSHH---HHHHHHHHHGGGCSEEEECH-HHHHH---------HTTHHHHHHHHHC------TTSEEEEEE
T ss_pred CeEEEeCC--CCHH---HHHHHHHHhcCCceEEEeCc-HHHHh---------cCHHHHHHHHHhC------CCCcEEEEE
Confidence 46666633 1344 44555566666899999975 22211 1125666666541 012345567
Q ss_pred EecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE-
Q 012517 321 KIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG- 399 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg- 399 (462)
|+- |. ....++.+.++|+|+|++..... .+...++++.+++. .+..+.
T Consensus 67 ~l~-d~----p~~~~~~~~~aGad~i~vh~~~~-----------------------~~~~~~~~~~~~~~---g~~~~~d 115 (218)
T 3jr2_A 67 KTT-DG----GAILSRMAFEAGADWITVSAAAH-----------------------IATIAACKKVADEL---NGEIQIE 115 (218)
T ss_dssp EEC-SC----HHHHHHHHHHHTCSEEEEETTSC-----------------------HHHHHHHHHHHHHH---TCEEEEE
T ss_pred eec-cc----HHHHHHHHHhcCCCEEEEecCCC-----------------------HHHHHHHHHHHHHh---CCcccee
Confidence 875 32 23467888999999999875421 00112444555554 243332
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchh
Q 012517 400 CGGISSGEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aGAd~Vqv~Ta 425 (462)
.=|+.|++++.+..+.|+|.+.+.++
T Consensus 116 ~l~~~T~~~~~~~~~~g~d~v~~~~~ 141 (218)
T 3jr2_A 116 IYGNWTMQDAKAWVDLGITQAIYHRS 141 (218)
T ss_dssp CCSSCCHHHHHHHHHTTCCEEEEECC
T ss_pred eeecCCHHHHHHHHHcCccceeeeec
Confidence 44556889999998899998766443
No 344
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.47 E-value=0.62 Score=47.14 Aligned_cols=117 Identities=22% Similarity=0.267 Sum_probs=72.7
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCcc---CCCCCCC----C---Ccc------cccC-CC---CCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS---RPDPVSK----N---PVA------KETG-GL---SGK 374 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~---r~~~~~~----~---~~~------~~~G-Gl---SG~ 374 (462)
+.|+++-|-..-+.+...++++.+++.|+++|+++=.... |..++.. + ... ...| ++ +..
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 4689998854345557789999999999999987632211 2111100 1 000 0111 11 110
Q ss_pred cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEch--h-hhhcCCChH
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYT--A-FAYGGPALI 434 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~T--a-li~~GP~~i 434 (462)
.-...+.+.|+.+++.+ ++||+.- ||.+.+||....++|||.|.+.. + -.+.||..+
T Consensus 212 ~d~~~~~~~i~~lr~~~--~~PvivK-~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~ 271 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHS--GLPVFVK-GIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSF 271 (368)
T ss_dssp BCSBCCHHHHHHHHHHS--SSCEEEE-EECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHH
T ss_pred cCchhhHHHHHHHHHHc--CCCEEEE-cCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChH
Confidence 01235678899999998 6898866 57999999999999999999943 1 123456544
No 345
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.44 E-value=1.3 Score=43.33 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=60.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+- -++..++++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~-t~~ai~la~ 101 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTT----GESPTLTSEEKVALYRHVVSVVD-------KRVPVIAGTGSNN-THASIDLTK 101 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCceEEeCCCCCC-HHHHHHHHH
Confidence 55556665544 59999997653 33333344556677787777652 4789999998643 357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 102 ~A~~~Gadavlv~~P~y~~ 120 (301)
T 1xky_A 102 KATEVGVDAVMLVAPYYNK 120 (301)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEEcCCCCCC
Confidence 9999999999988665443
No 346
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.42 E-value=1.2 Score=43.78 Aligned_cols=159 Identities=17% Similarity=0.171 Sum_probs=90.9
Q ss_pred HHHHHHcccCcEEEEecc-CC-CCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC--ChhhHHHHHH
Q 012517 261 QGVHTLSQYADYLVINVS-SP-NTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL--SKEDLEDIAA 336 (462)
Q Consensus 261 ~~~~~l~~~aD~leiNvS-sP-nt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl--~~~~~~~ia~ 336 (462)
..+++++ +|+|-+-=| .- +.-|..+. ..-.+.+++..++..++. .+.||++-+.-.. +.+++.+.++
T Consensus 31 ~~~~~aG--~~ai~vs~~~~a~~~~G~pD~-~~vt~~em~~~~~~I~~~------~~~PviaD~d~Gyg~~~~~~~~~v~ 101 (295)
T 1xg4_A 31 LLAQRAG--YQAIYLSGGGVAAGSLGLPDL-GISTLDDVLTDIRRITDV------CSLPLLVDADIGFGSSAFNVARTVK 101 (295)
T ss_dssp HHHHHTT--CSCEEECHHHHHHTTTCCCSS-SCSCHHHHHHHHHHHHHH------CCSCEEEECTTCSSSSHHHHHHHHH
T ss_pred HHHHHcC--CCEEEECchHhhhhhcCCCCC-CCCCHHHHHHHHHHHHhh------CCCCEEecCCcccCCCHHHHHHHHH
Confidence 3444444 888877421 11 12244432 122345555555555432 3689999997655 3567888889
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchH--HHHHHHHHhc-CCCccEEEecCCC-------CH
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN--NILKEMYLLT-RGKIPLIGCGGIS-------SG 406 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al--~~v~~i~~~~-~~~ipIIg~GGI~-------s~ 406 (462)
.+.++|++||.+=.... ....|-+.|+.+.|... +.|+.+++.. .+++-|++=-.-. .-
T Consensus 102 ~l~~aGa~gv~iEd~~~-----------~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai 170 (295)
T 1xg4_A 102 SMIKAGAAGLHIEDQVG-----------AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAI 170 (295)
T ss_dssp HHHHHTCSEEEEECBCS-----------SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHH
T ss_pred HHHHcCCeEEEECCCCC-----------CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHH
Confidence 99999999998754331 11345566787877653 2344444432 2344455433211 23
Q ss_pred HHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 407 EDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 407 ~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
++|..+.++|||+|.+-. + ..+..++++.+.+.
T Consensus 171 ~ra~ay~eAGAd~i~~e~-~--~~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLFPEA-I--TELAMYRQFADAVQ 203 (295)
T ss_dssp HHHHHHHHTTCSEEEETT-C--CSHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEeC-C--CCHHHHHHHHHHcC
Confidence 356677789999998754 2 23456777777663
No 347
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=93.42 E-value=2.2 Score=38.69 Aligned_cols=120 Identities=16% Similarity=0.153 Sum_probs=67.2
Q ss_pred HHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE--EecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV--KIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v--Kispdl~~~~~~~ia 335 (462)
+..+.++.+.+++|++++.... ++ -.. .++++.+++.. .+.|+++ |+. |. ....+
T Consensus 14 ~~~~~~~~~~~~v~~iev~~~~-~~-----~~g----~~~i~~l~~~~--------~~~~i~~~l~~~-di----~~~~~ 70 (207)
T 3ajx_A 14 AALELAGKVAEYVDIIELGTPL-IK-----AEG----LSVITAVKKAH--------PDKIVFADMKTM-DA----GELEA 70 (207)
T ss_dssp HHHHHHHHHGGGCSEEEECHHH-HH-----HHC----THHHHHHHHHS--------TTSEEEEEEEEC-SC----HHHHH
T ss_pred HHHHHHHHhhccCCEEEECcHH-HH-----hhC----HHHHHHHHHhC--------CCCeEEEEEEec-Cc----cHHHH
Confidence 6667777777788999996521 00 011 24556665431 2578886 864 42 23457
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccE-EEecCCCCHHH-HHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPL-IGCGGISSGED-AYRKI 413 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI-Ig~GGI~s~~d-A~e~i 413 (462)
+.+.++|+|+|+++-.. +. ....+.++.+++. ++++ +.+-..+|+++ +.+..
T Consensus 71 ~~a~~~Gad~v~vh~~~--------------------~~---~~~~~~~~~~~~~---g~~~gv~~~s~~~p~~~~~~~~ 124 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSA--------------------DD---STIAGAVKAAQAH---NKGVVVDLIGIEDKATRAQEVR 124 (207)
T ss_dssp HHHHHTTCSEEEEETTS--------------------CH---HHHHHHHHHHHHH---TCEEEEECTTCSSHHHHHHHHH
T ss_pred HHHHhCCCCEEEEeccC--------------------Ch---HHHHHHHHHHHHc---CCceEEEEecCCChHHHHHHHH
Confidence 88899999999886321 00 0011233333332 2343 22334447777 44445
Q ss_pred HhCCCEEEEchhh
Q 012517 414 RAGATLVQLYTAF 426 (462)
Q Consensus 414 ~aGAd~Vqv~Tal 426 (462)
..|+|.|-+..++
T Consensus 125 ~~g~d~v~~~~~~ 137 (207)
T 3ajx_A 125 ALGAKFVEMHAGL 137 (207)
T ss_dssp HTTCSEEEEECCH
T ss_pred HhCCCEEEEEecc
Confidence 6799999555443
No 348
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=93.40 E-value=0.96 Score=44.06 Aligned_cols=113 Identities=15% Similarity=0.039 Sum_probs=69.1
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
..+||++|-..+.+.+++...++.+...|-+-+++.-.+... +.......++.+..+++..+
T Consensus 128 ~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-----------------~~~~~~~dl~~i~~lk~~~~- 189 (280)
T 2qkf_A 128 TGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-----------------GYDNLVVDMLGFGVMKQTCG- 189 (280)
T ss_dssp TCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-----------------STTCEECCTTHHHHHHHHTT-
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-----------------CCCccccCHHHHHHHHHhCC-
Confidence 378999999988788899999999999998666665432111 11111134566777888763
Q ss_pred CccEEE-----------ecCCCCH------HHHHHHHHhCCCEEEEchhhh-----hc-----CCChHHHHHHHHHHH
Q 012517 394 KIPLIG-----------CGGISSG------EDAYRKIRAGATLVQLYTAFA-----YG-----GPALIPQIKAELAEC 444 (462)
Q Consensus 394 ~ipIIg-----------~GGI~s~------~dA~e~i~aGAd~Vqv~Tali-----~~-----GP~~i~~i~~~L~~~ 444 (462)
.+||+. .||-+.+ .-+...+.+||+.++|=+-+. -. .|+-++++.+++++.
T Consensus 190 ~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i~~~ 267 (280)
T 2qkf_A 190 NLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKAL 267 (280)
T ss_dssp TCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------CCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHHHHH
Confidence 478887 3444444 345666789999888776552 01 366667777666643
No 349
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=93.37 E-value=2.3 Score=42.73 Aligned_cols=139 Identities=13% Similarity=0.111 Sum_probs=93.0
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
+..+++. .+++ ++++.++++ ...+..+-+.+... +.+.-.+.+++|+++. .+.+|+|
T Consensus 135 ~~~~~~~--~~~e---~~~~~a~~~~~~G~~~iK~Kvg~~---------~~~~d~~~v~avr~~~--------~~~~l~v 192 (365)
T 3ik4_A 135 TDMTITA--GDEV---HAAASAKAILARGIKSIKVKTAGV---------DVAYDLARLRAIHQAA--------PTAPLIV 192 (365)
T ss_dssp BCEEECC--SCHH---HHHHHHHHHHHTTCCCEEEECCSS---------CHHHHHHHHHHHHHHS--------SSCCEEE
T ss_pred eeEEecC--CCHH---HHHHHHHHHHHcCCCEEEEEeCCC---------CHHHHHHHHHHHHHhC--------CCCeEEE
Confidence 3444543 2555 555545444 34578888887532 1233345666676653 2568888
Q ss_pred EecCCCChhhHHHHHHHH--HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 321 KIAPDLSKEDLEDIAAVA--VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 321 Kispdl~~~~~~~ia~~~--~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
-....++.++..++++.+ .+.++..|- .|+.+...+..+++++.+ .+||.
T Consensus 193 DaN~~~~~~~A~~~~~~L~~~~~~i~~iE--------------------------eP~~~~d~~~~~~l~~~~--~ipIa 244 (365)
T 3ik4_A 193 DGNCGYDVERALAFCAACKAESIPMVLFE--------------------------QPLPREDWAGMAQVTAQS--GFAVA 244 (365)
T ss_dssp ECTTCCCHHHHHHHHHHHHHTTCCEEEEE--------------------------CCSCTTCHHHHHHHHHHS--SSCEE
T ss_pred ECCCCCCHHHHHHHHHHHhhCCCCceEEE--------------------------CCCCcccHHHHHHHHhhC--CCCEE
Confidence 887778888888899988 555444331 012223467778899888 69999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCCC
Q 012517 399 GCGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGPA 432 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP~ 432 (462)
+.--+.+.+|+.+.++.| +|.||+=-.. .|..
T Consensus 245 ~dE~~~~~~~~~~~i~~~a~d~v~ik~~~--GGit 277 (365)
T 3ik4_A 245 ADESARSAHDVLRIAREGTASVINIKLMK--AGVA 277 (365)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECHHH--HCHH
T ss_pred ECCCCCCHHHHHHHHHhCCCCEEEEcCCc--cCHH
Confidence 999999999999999987 9999997766 4543
No 350
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.31 E-value=0.12 Score=54.57 Aligned_cols=82 Identities=22% Similarity=0.232 Sum_probs=59.0
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCcc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ip 396 (462)
.+.|..+.... ++..+.++.+.++|+|.|++. +.... .+..++.++++++.++ ++|
T Consensus 219 rL~v~aavG~~-~d~~~~a~~l~~aG~d~I~id-~a~g~---------------------~~~~~~~i~~ir~~~p-~~~ 274 (496)
T 4fxs_A 219 RLRVGAAVGAA-PGNEERVKALVEAGVDVLLID-SSHGH---------------------SEGVLQRIRETRAAYP-HLE 274 (496)
T ss_dssp CBCCEEECCSS-SCCHHHHHHHHHTTCSEEEEE-CSCTT---------------------SHHHHHHHHHHHHHCT-TCC
T ss_pred ceeeeeeeccc-cchHHHHHHHHhccCceEEec-ccccc---------------------chHHHHHHHHHHHHCC-Cce
Confidence 44444443332 234567888889999988764 32110 1235688999999985 688
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 397 LIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 397 IIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
|++ |+|.+.++|.+++++|||.|-++
T Consensus 275 Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 275 IIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp EEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred EEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 887 88999999999999999999874
No 351
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=93.29 E-value=0.24 Score=48.52 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=53.8
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCcc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ip 396 (462)
||.|=+- + + +-++.+.+.|+|.|.+.|-+. +...+.++.+++.. .+++
T Consensus 196 ~I~Vev~---t---~-eea~eal~aGaD~I~LDn~~~------------------------~~~~~~v~~l~~~~-~~v~ 243 (284)
T 1qpo_A 196 PCEVEVD---S---L-EQLDAVLPEKPELILLDNFAV------------------------WQTQTAVQRRDSRA-PTVM 243 (284)
T ss_dssp CEEEEES---S---H-HHHHHHGGGCCSEEEEETCCH------------------------HHHHHHHHHHHHHC-TTCE
T ss_pred CEEEEeC---C---H-HHHHHHHHcCCCEEEECCCCH------------------------HHHHHHHHHhhccC-CCeE
Confidence 7777553 2 2 223445668999998888431 11234455555533 2689
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 397 LIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 397 IIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
|.++|||+ .+.+.++.++|+|.+.+++..
T Consensus 244 ieaSGGIt-~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 244 LESSGGLS-LQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp EEEESSCC-TTTHHHHHHTTCSEEECGGGT
T ss_pred EEEECCCC-HHHHHHHHhcCCCEEEECHHH
Confidence 99999994 999999999999999988854
No 352
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.24 E-value=0.47 Score=44.22 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=67.2
Q ss_pred CCCEEEEecCC---CChh--hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHH
Q 012517 315 PPPLLVKIAPD---LSKE--DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYL 389 (462)
Q Consensus 315 ~~Pv~vKispd---l~~~--~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~ 389 (462)
..++.++..++ .+.+ ++.++++.+.+.|+++|.+. ..+.++.+++
T Consensus 17 ~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~------------------------------~~~~i~~i~~ 66 (234)
T 1yxy_A 17 GIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN------------------------------SVRDIKEIQA 66 (234)
T ss_dssp SCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE------------------------------SHHHHHHHHT
T ss_pred CEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC------------------------------CHHHHHHHHH
Confidence 56777776543 3456 88999999999999998752 1245788888
Q ss_pred hcCCCccEEEec-------CC---CCHHHHHHHHHhCCCEEEEchhhhhcCC--ChHHHHHHHHHH
Q 012517 390 LTRGKIPLIGCG-------GI---SSGEDAYRKIRAGATLVQLYTAFAYGGP--ALIPQIKAELAE 443 (462)
Q Consensus 390 ~~~~~ipIIg~G-------GI---~s~~dA~e~i~aGAd~Vqv~Tali~~GP--~~i~~i~~~L~~ 443 (462)
.+ ++|++++- ++ .+.+++.+++++||+.|.+...... .| ..+.++.+.+++
T Consensus 67 ~~--~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~-~~~~~~~~~~i~~i~~ 129 (234)
T 1yxy_A 67 IT--DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD-RHDGLDIASFIRQVKE 129 (234)
T ss_dssp TC--CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC-CTTCCCHHHHHHHHHH
T ss_pred hC--CCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC-CCCCccHHHHHHHHHH
Confidence 88 69997641 23 2568899999999999999887643 35 233444444443
No 353
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=93.13 E-value=1.6 Score=42.72 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=59.8
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|.|.++=|+ |.-.....+.-.++++.+.++.+ .++||++=+..+ +-++..++++
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~-~t~~ai~la~ 96 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTT----GESATLSVEEHTAVIEAVVKHVA-------KRVPVIAGTGAN-NTVEAIALSQ 96 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCc-CHHHHHHHHH
Confidence 5555555554 359999988653 33333344556677777777652 479999988754 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 97 ~a~~~Gadavlv~~P~y~~ 115 (297)
T 3flu_A 97 AAEKAGADYTLSVVPYYNK 115 (297)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHHcCCCEEEECCCCCCC
Confidence 9999999999988655443
No 354
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.12 E-value=1.3 Score=42.34 Aligned_cols=111 Identities=14% Similarity=0.038 Sum_probs=66.9
Q ss_pred CCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc------cccCCCCCCcCccchHHHHHHHHHhcCCCccE
Q 012517 324 PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA------KETGGLSGKPLLSLSNNILKEMYLLTRGKIPL 397 (462)
Q Consensus 324 pdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~------~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI 397 (462)
.|.+.++..++++.+.+.|+|+|.+.....+ | +...+.. ....|++ ....++.++++++.++ ++|+
T Consensus 26 g~p~~~~~~~~~~~l~~~G~D~IElG~P~sd-P--~adgp~i~~a~~~al~~G~~----~~~~~~~v~~ir~~~~-~~Pi 97 (262)
T 2ekc_A 26 GYPDYETSLKAFKEVLKNGTDILEIGFPFSD-P--VADGPTIQVAHEVALKNGIR----FEDVLELSETLRKEFP-DIPF 97 (262)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSEEEEECCCSC-C--TTSCHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHCT-TSCE
T ss_pred CCCChHHHHHHHHHHHHcCCCEEEECCCCCC-c--ccccHHHHHHHHHHHHcCCC----HHHHHHHHHHHHhhcC-CCCE
Confidence 3444468899999999999999999655421 1 1110100 0112221 1234677899998864 5899
Q ss_pred EEecCCCC-------HHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 398 IGCGGISS-------GEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 398 Ig~GGI~s-------~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
+..| -.+ .+.+.++.++|+|.+-+. ++..+-.+++.+.++++|+.
T Consensus 98 ~~m~-y~n~v~~~g~~~f~~~~~~aG~dgvii~--------dl~~ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 98 LLMT-YYNPIFRIGLEKFCRLSREKGIDGFIVP--------DLPPEEAEELKAVMKKYVLS 149 (262)
T ss_dssp EEEC-CHHHHHHHCHHHHHHHHHHTTCCEEECT--------TCCHHHHHHHHHHHHHTTCE
T ss_pred EEEe-cCcHHHHhhHHHHHHHHHHcCCCEEEEC--------CCCHHHHHHHHHHHHHcCCc
Confidence 8863 333 355566778999977663 33223345556667778753
No 355
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.09 E-value=1.6 Score=42.52 Aligned_cols=86 Identities=12% Similarity=0.141 Sum_probs=59.0
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|.|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~-~t~~ai~la~ 90 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTT----GEASTLSMEEHTQVIKEIIRVAN-------KRIPIIAGTGAN-STREAIELTK 90 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccc----cccccCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCC-CHHHHHHHHH
Confidence 4444455443 359999987543 33333344555677888777652 468999988764 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 91 ~a~~~Gadavlv~~P~y~~ 109 (291)
T 3tak_A 91 AAKDLGADAALLVTPYYNK 109 (291)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEEcCCCCCC
Confidence 9999999999988655433
No 356
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=93.01 E-value=1.4 Score=43.44 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=59.3
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~-st~eai~la~ 112 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTT----GESATLDVEEHIQVIRRVVDQVK-------GRIPVIAGTGAN-STREAVALTE 112 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCc-CHHHHHHHHH
Confidence 55555555543 59999997543 33223344555677777777652 468999988764 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 113 ~A~~~Gadavlv~~P~y~~ 131 (314)
T 3qze_A 113 AAKSGGADACLLVTPYYNK 131 (314)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHHcCCCEEEEcCCCCCC
Confidence 9999999999988665444
No 357
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.99 E-value=1.3 Score=43.10 Aligned_cols=86 Identities=8% Similarity=0.076 Sum_probs=59.8
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~-~t~~ai~la~ 89 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTT----GESPTLTFEEHEKVIEFAVKRAA-------GRIKVIAGTGGN-ATHEAVHLTA 89 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCC-CHHHHHHHHH
Confidence 45555665543 59999987653 33333344555677777777652 478999999865 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 90 ~A~~~Gadavlv~~P~y~~ 108 (294)
T 2ehh_A 90 HAKEVGADGALVVVPYYNK 108 (294)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 358
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.97 E-value=1.3 Score=43.46 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=60.0
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.++++. ..++||++=+..+ +-++..++++
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~-------~grvpviaGvg~~-~t~~ai~la~ 104 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTT----GESPTTTDGEKIELLRAVLEAV-------GDRARVIAGAGTY-DTAHSIRLAK 104 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHH-------TTTSEEEEECCCS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHh-------CCCCeEEEeCCCC-CHHHHHHHHH
Confidence 55555555543 59999988653 3333334455567778777765 2478999998654 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 105 ~a~~~Gadavlv~~P~y~~ 123 (304)
T 3l21_A 105 ACAAEGAHGLLVVTPYYSK 123 (304)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHHcCCCEEEECCCCCCC
Confidence 9999999999988655443
No 359
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.97 E-value=1.2 Score=43.42 Aligned_cols=86 Identities=12% Similarity=0.165 Sum_probs=59.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.++.+ .++||++=+..+- -++..++++
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~-t~~ai~la~ 89 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTT----GESPTLSHEEHKKVIEKVVDVVN-------GRVQVIAGAGSNC-TEEAIELSV 89 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSS-HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCC-HHHHHHHHH
Confidence 45555555443 59999997653 33333344556677777777652 4689999998653 357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 90 ~a~~~Gadavlv~~P~y~~ 108 (289)
T 2yxg_A 90 FAEDVGADAVLSITPYYNK 108 (289)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 360
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.95 E-value=0.18 Score=52.75 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.++|+|.|.+..+ . |. ....++.++++++.++ ++||+. |++.+.++|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~-~----------------G~-----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a 292 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTA-H----------------GH-----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGT 292 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCS-C----------------CS-----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHH
T ss_pred hHHHHHHHHHHhCCCEEEEEec-C----------------Cc-----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHH
Confidence 5567888999999999987422 1 11 1235688999999986 588876 788999999
Q ss_pred HHHHHhCCCEEEEc
Q 012517 410 YRKIRAGATLVQLY 423 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~ 423 (462)
..+.++|||.|.++
T Consensus 293 ~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 293 EALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEc
Confidence 99999999999983
No 361
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=92.95 E-value=0.7 Score=45.14 Aligned_cols=83 Identities=27% Similarity=0.324 Sum_probs=58.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISS 405 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s 405 (462)
++.+.+..+++.+.+.|+|||++..||-.-. -|| .+.-.++++.+.+.+++ -|+|+|+..+
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-------------~Ls----~eEr~~v~~~~~~~~~g--viaGvg~~~t 77 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGTTGLGP-------------SLS----PEEKLENLKAVYDVTNK--IIFQVGGLNL 77 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------------GSC----HHHHHHHHHHHHTTCSC--EEEECCCSCH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-------------hCC----HHHHHHHHHHHHHHcCC--EEEecCCCCH
Confidence 5666789999999999999999988773211 111 12235677777877765 6677777654
Q ss_pred HHHHHHHH----HhCCCEEEEchhhhh
Q 012517 406 GEDAYRKI----RAGATLVQLYTAFAY 428 (462)
Q Consensus 406 ~~dA~e~i----~aGAd~Vqv~Tali~ 428 (462)
+++.+.. ++|||.|++.+.+.+
T Consensus 78 -~~ai~la~~A~~~Gadavlv~~P~y~ 103 (293)
T 1w3i_A 78 -DDAIRLAKLSKDFDIVGIASYAPYYY 103 (293)
T ss_dssp -HHHHHHHHHGGGSCCSEEEEECCCSC
T ss_pred -HHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 5555554 369999999999844
No 362
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.95 E-value=0.18 Score=53.14 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.++|+|+|++. +.. |. ....++.++.+++.++ ++||++ |+|.+.++|
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~-~~~----------------G~-----~~~~~~~i~~i~~~~~-~~pvi~-~~v~t~~~a 310 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLD-SSQ----------------GN-----SVYQIAMVHYIKQKYP-HLQVIG-GNVVTAAQA 310 (514)
T ss_dssp THHHHHHHHHHTTCSEEEEC-CSC----------------CC-----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHH
T ss_pred hhHHHHHHHHHcCCCEEEee-ccC----------------Cc-----chhHHHHHHHHHHhCC-CCceEe-cccchHHHH
Confidence 45677788899999998873 321 11 0235688999999984 688875 789999999
Q ss_pred HHHHHhCCCEEEEc
Q 012517 410 YRKIRAGATLVQLY 423 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~ 423 (462)
..++++|||.|-++
T Consensus 311 ~~l~~aGad~I~vg 324 (514)
T 1jcn_A 311 KNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 99999999999883
No 363
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.94 E-value=1.5 Score=43.63 Aligned_cols=86 Identities=17% Similarity=0.203 Sum_probs=59.9
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.++++.+ .++||++=+..+- -++..++++
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~s-t~eai~la~ 123 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGST----GIYMYLTREERRRAIEAAATILR-------GRRTLMAGIGALR-TDEAVALAK 123 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECCSS-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCC-HHHHHHHHH
Confidence 45555555543 59999998653 33333344556677888777652 4789999998653 357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 124 ~A~~~Gadavlv~~P~Y~~ 142 (332)
T 2r8w_A 124 DAEAAGADALLLAPVSYTP 142 (332)
T ss_dssp HHHHHTCSEEEECCCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 364
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.87 E-value=2.7 Score=40.39 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChh
Q 012517 251 TSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKE 329 (462)
Q Consensus 251 ~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~ 329 (462)
.|+++.+-+.+-++.+.+ .+|.+++-+..|+.. -+.+.+.+|+++. ...|+.+--+-|...
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~-----iD~~~~~~Li~~a------------~~~~vTFHRAfD~~~- 128 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGN-----VDMPRMEKIMAAA------------GPLAVTFHRAFDMCA- 128 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSS-----BCHHHHHHHHHHH------------TTSEEEECGGGGGCS-
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCC-----cCHHHHHHHHHHh------------CCCcEEEECchhccC-
Confidence 366766666655555555 399999988766531 2445666666543 256777777777653
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+-.+.+.+.|++-|--+..... -...++.++++.+..+ ++-|+.-|||+ .+.+
T Consensus 129 d~~~ale~L~~lG~~rILTSG~~~~----------------------a~~g~~~L~~Lv~~a~-~i~Im~GgGv~-~~Ni 184 (256)
T 1twd_A 129 NPLYTLNNLAELGIARVLTSGQKSD----------------------ALQGLSKIMELIAHRD-APIIMAGAGVR-AENL 184 (256)
T ss_dssp CHHHHHHHHHHHTCCEEEECTTSSS----------------------TTTTHHHHHHHHTSSS-CCEEEEESSCC-TTTH
T ss_pred CHHHHHHHHHHcCCCEEECCCCCCC----------------------HHHHHHHHHHHHHhhC-CcEEEecCCcC-HHHH
Confidence 4455678888899999864432100 1123567777777665 78899999996 5666
Q ss_pred HHHHHhCCCEEEEc
Q 012517 410 YRKIRAGATLVQLY 423 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~ 423 (462)
.+.+.+|++-+-..
T Consensus 185 ~~l~~tGv~e~H~S 198 (256)
T 1twd_A 185 HHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCeEeEC
Confidence 66668999888754
No 365
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.82 E-value=1.6 Score=42.78 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=59.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~-st~~ai~la~ 105 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTT----GESPTTTAAEKLELLKAVREEVG-------DRAKLIAGVGTN-NTRTSVELAE 105 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTT----TTTTTSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEecCCCC-CHHHHHHHHH
Confidence 45555565544 59999998653 33223344555677777776652 478999999864 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 106 ~A~~~Gadavlv~~P~y~~ 124 (304)
T 3cpr_A 106 AAASAGADGLLVVTPYYSK 124 (304)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 366
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=92.76 E-value=0.28 Score=46.79 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHH-H
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGE-D 408 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~-d 408 (462)
.+..+++.+.++|+||++++.+ + +..+|+.++.++ ++.+.||.-.. +
T Consensus 145 ~v~~~A~~a~~~g~~GvV~s~~------------------------------e-~~~ir~~~~~~f-l~vtPGIr~~g~~ 192 (239)
T 3tr2_A 145 IVCRMATLAKSAGLDGVVCSAQ------------------------------E-AALLRKQFDRNF-LLVTPGIRLETDE 192 (239)
T ss_dssp HHHHHHHHHHHHTCCEEECCHH------------------------------H-HHHHHTTCCTTS-EEEECCBC-----
T ss_pred HHHHHHHHHHHcCCCEEEECch------------------------------h-HHHHHHhcCCCc-EEECCCcCCCCCC
Confidence 4456777788899999986522 1 245777776555 67778886322 1
Q ss_pred ---------HHHHHHhCCCEEEEchhhhhcCCC
Q 012517 409 ---------AYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 409 ---------A~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
..+.+++|||.+-++|++ ++.++
T Consensus 193 ~~dQ~rv~t~~~~~~aGad~lVvGr~I-~~a~d 224 (239)
T 3tr2_A 193 KGDQKRVMTPRAAIQAGSDYLVIGRPI-TQSTD 224 (239)
T ss_dssp -----CCBCHHHHHHHTCSEEEECHHH-HTSSS
T ss_pred cCcccccCCHHHHHHcCCCEEEEChHH-hCCCC
Confidence 557889999999999998 44444
No 367
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.75 E-value=0.35 Score=51.13 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=59.2
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.++.+-+.... +..+.++.+.++|+|.|++.... |. ....++.++++++..+ +
T Consensus 244 rl~V~aavg~~~---d~~era~aLveaGvd~I~Id~a~----------------g~------~~~v~~~i~~i~~~~~-~ 297 (511)
T 3usb_A 244 RLLVGAAVGVTA---DAMTRIDALVKASVDAIVLDTAH----------------GH------SQGVIDKVKEVRAKYP-S 297 (511)
T ss_dssp CBCCEEEECSST---THHHHHHHHHHTTCSEEEEECSC----------------TT------SHHHHHHHHHHHHHCT-T
T ss_pred ceeeeeeeeecc---chHHHHHHHHhhccceEEecccc----------------cc------hhhhhhHHHHHHHhCC-C
Confidence 455666665443 34566888899999998875221 11 1125678999999885 5
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
+||+ .|+|.+.++|.+++++|||.|-+
T Consensus 298 ~~vi-~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 298 LNII-AGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp SEEE-EEEECSHHHHHHHHHHTCSEEEE
T ss_pred ceEE-eeeeccHHHHHHHHHhCCCEEEE
Confidence 7777 57899999999999999999986
No 368
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=92.74 E-value=2.5 Score=41.06 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=58.3
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+-+ ++..++++
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t-~~ai~la~ 89 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTT----GESPTLSKSEHEQVVEITIKTAN-------GRVPVIAGAGSNST-AEAIAFVR 89 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSH-HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccH-HHHHHHHH
Confidence 45555555543 59999987542 33323344556677787777652 47899999986533 57789999
Q ss_pred HHHHcCCcEEEEecCCcc
Q 012517 337 VAVALRLDGLIISNTTIS 354 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~ 354 (462)
.+++.|+|++.+....+.
T Consensus 90 ~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 90 HAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp HHHHTTCSEEEEECCCSS
T ss_pred HHHHcCCCEEEEcCCCCC
Confidence 999999999988765443
No 369
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=92.72 E-value=2.5 Score=43.02 Aligned_cols=132 Identities=15% Similarity=0.060 Sum_probs=96.0
Q ss_pred HHHHHHHHHH-cc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHH
Q 012517 257 ADYVQGVHTL-SQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDI 334 (462)
Q Consensus 257 ~dy~~~~~~l-~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~i 334 (462)
+++++.++++ .. .+..+-+.+.. +.+.-.+.+++|+++. .+.+|+|.....++.++...+
T Consensus 170 e~~~~~a~~~~~~~G~~~~K~KvG~----------~~~~d~~~v~avR~~~--------~~~~l~vDaN~~w~~~~A~~~ 231 (398)
T 4dye_A 170 KAMAEHAVRVVEEGGFDAVKLKGTT----------DCAGDVAILRAVREAL--------PGVNLRVDPNAAWSVPDSVRA 231 (398)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCS----------CHHHHHHHHHHHHHHC--------TTSEEEEECTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCC----------CHHHHHHHHHHHHHhC--------CCCeEEeeCCCCCCHHHHHHH
Confidence 3566555544 34 58888888751 1233346677777653 368999998888888899999
Q ss_pred HHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 335 AAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 335 a~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
++.+.+.+++.|- . |+. .++..+++++.+ .+||.+..-+.+.+|+.+.++
T Consensus 232 ~~~l~~~~i~~iE-------q-------------------P~~--d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 281 (398)
T 4dye_A 232 GIALEELDLEYLE-------D-------------------PCV--GIEGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMR 281 (398)
T ss_dssp HHHHGGGCCSEEE-------C-------------------CSS--HHHHHHHHHHHC--CSCEEESSSCCSGGGHHHHHH
T ss_pred HHHHhhcCCCEEc-------C-------------------CCC--CHHHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHH
Confidence 9999999887762 1 112 457778899988 699999999999999999999
Q ss_pred hC-CCEEEEchhhhhcCCChHHHH
Q 012517 415 AG-ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 415 aG-Ad~Vqv~Tali~~GP~~i~~i 437 (462)
.| +|.||+--+-+ .|..-..+|
T Consensus 282 ~~a~d~v~~k~~~~-GGit~~~~i 304 (398)
T 4dye_A 282 LNAVDVIHGDVYKW-GGIAATKAL 304 (398)
T ss_dssp TTCCSEEEECHHHH-TSHHHHHHH
T ss_pred hCCCCEEEeCcccc-CCHHHHHHH
Confidence 87 99999987774 454333333
No 370
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=92.70 E-value=0.71 Score=43.06 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH--
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-- 406 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-- 406 (462)
+.+..+++. .+.|+| ++.+. +.++++++.++. + +.++||.--
T Consensus 126 ~~v~~~a~~-~e~G~d-vV~~~-------------------------------~~~~~ir~~~~~--~-~v~pGI~~~~~ 169 (213)
T 1vqt_A 126 DYMDRIEKL-NKLGCD-FVLPG-------------------------------PWAKALREKIKG--K-ILVPGIRMEVK 169 (213)
T ss_dssp HHHHHHHHH-HHHTCE-EECCH-------------------------------HHHHHHTTTCCS--C-EEECCBC----
T ss_pred HHHHHHHHH-hcCCCE-EEEcH-------------------------------HHHHHHHHHCCC--C-EEECCCCCCCC
Confidence 466778888 899998 54320 345677777753 5 888898532
Q ss_pred -HH------HHHHHHhCCCEEEEchhhhhcCCC
Q 012517 407 -ED------AYRKIRAGATLVQLYTAFAYGGPA 432 (462)
Q Consensus 407 -~d------A~e~i~aGAd~Vqv~Tali~~GP~ 432 (462)
.| ..+ +++|||.+-++|++.. -++
T Consensus 170 ~~dq~rv~t~~~-i~aGad~iVvGR~I~~-a~d 200 (213)
T 1vqt_A 170 ADDQKDVVTLEE-MKGIANFAVLGREIYL-SEN 200 (213)
T ss_dssp -----CCBCHHH-HTTTCSEEEESHHHHT-SSC
T ss_pred ccchhhcCCHHH-HHCCCCEEEEChhhcC-CCC
Confidence 12 577 8999999999999954 454
No 371
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=92.63 E-value=0.85 Score=45.03 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=58.9
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+++..+ .++||++=+.. +-++..++++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~--st~~ai~la~ 100 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGNT----GEFYALTIEEAKQVATRVTELVN-------GRATVVAGIGY--SVDTAIELGK 100 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECS--SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----CChhhCCHHHHHHHHHHHHHHhC-------CCCeEEecCCc--CHHHHHHHHH
Confidence 45555555543 58999876432 32223344555677777777652 47899999987 5567889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 101 ~A~~~Gadavlv~~P~y~~ 119 (314)
T 3d0c_A 101 SAIDSGADCVMIHQPVHPY 119 (314)
T ss_dssp HHHHTTCSEEEECCCCCSC
T ss_pred HHHHcCCCEEEECCCCCCC
Confidence 9999999999988654433
No 372
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=92.62 E-value=1.5 Score=43.79 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=60.0
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.++++.+ .++||++=+..+ +-++..++++
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~-st~eai~la~ 120 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSG----GEFSQLGAEERKAIARFAIDHVD-------RRVPVLIGTGGT-NARETIELSQ 120 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCSS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCC-CHHHHHHHHH
Confidence 45555555543 59999987643 33333344556677888777652 478999999864 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 121 ~A~~~Gadavlv~~P~Y~~ 139 (343)
T 2v9d_A 121 HAQQAGADGIVVINPYYWK 139 (343)
T ss_dssp HHHHHTCSEEEEECCSSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 373
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=92.58 E-value=4.3 Score=41.39 Aligned_cols=121 Identities=5% Similarity=-0.084 Sum_probs=84.7
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++... ..+..+-+-+... .+...+.+++|+++. +.+..|+|-....++.++...+++
T Consensus 191 ~~~~~a~~~~~~G~~~~K~k~g~~----------~~~~~~~v~~vR~~~-------g~~~~l~vDaN~~~~~~~A~~~~~ 253 (412)
T 4h1z_A 191 KRAELAAAWQAKGFSSFKFASPVA----------DDGVAKEMEILRERL-------GPAVRIACDMHWAHTASEAVALIK 253 (412)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGC----------TTCHHHHHHHHHHHH-------CSSSEEEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcceeccccccc----------hhhHHHHHHHHHhcc-------CCeEEEEeccccCCCHHHHHHHHH
Confidence 4444444443 3477777765321 122344566777654 457788888777788888899999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.++..|- . |+.+..++..+++++.+ .+||.+-=-+.+.+|+.++++.|
T Consensus 254 ~l~~~~l~~iE-------q-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 305 (412)
T 4h1z_A 254 AMEPHGLWFAE-------A-------------------PVRTEDIDGLARVAASV--STAIAVGEEWRTVHDMVPRVARR 305 (412)
T ss_dssp HHGGGCEEEEE-------C-------------------CSCTTCHHHHHHHHHHC--SSEEEECTTCCSHHHHHHHHHTT
T ss_pred hhcccccceec-------C-------------------CCCccchHHHHHHHhhc--CCccccCCcccchHhHHHHHHcC
Confidence 99988765431 1 12233567788999998 79999988999999999999988
Q ss_pred -CCEEEEc
Q 012517 417 -ATLVQLY 423 (462)
Q Consensus 417 -Ad~Vqv~ 423 (462)
+|.+|+-
T Consensus 306 a~div~~d 313 (412)
T 4h1z_A 306 ALAIVQPE 313 (412)
T ss_dssp CCSEECCC
T ss_pred CCCEEEec
Confidence 7888765
No 374
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=92.57 E-value=0.76 Score=45.42 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=58.4
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|+|.++=++ |.-.....+.-.++++.+.+..+ .++||++=+. . +-++..++++
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~v~~~~-------grvpViaGvg-~-~t~~ai~la~ 100 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGNT----SEFYALSLEEAKEEVRRTVEYVH-------GRALVVAGIG-Y-ATSTAIELGN 100 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEEC-S-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEEeC-c-CHHHHHHHHH
Confidence 5555565554 359999887543 33223344555677777777652 4789999997 4 6678899999
Q ss_pred HHHHcCCcEEEEecCCc
Q 012517 337 VAVALRLDGLIISNTTI 353 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~ 353 (462)
.+.+.|+|++.+....+
T Consensus 101 ~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 101 AAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHTCSEEEECCCCC
T ss_pred HHHhcCCCEEEEcCCCC
Confidence 99999999999875543
No 375
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.51 E-value=8.1 Score=37.37 Aligned_cols=168 Identities=13% Similarity=0.111 Sum_probs=94.3
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
||.+.+-- ...+++.+..-+..+.++ .++++.|-=...+ +| +.+-..+...+-+++++++++.. .+|++
T Consensus 78 pviaD~d~Gyg~~~~~~~~~v~~l~~a--Gaagv~iED~~~~-~~-k~l~~~~e~~~~I~aa~~a~~~~------g~~~~ 147 (275)
T 2ze3_A 78 PVNADIEAGYGHAPEDVRRTVEHFAAL--GVAGVNLEDATGL-TP-TELYDLDSQLRRIEAARAAIDAS------GVPVF 147 (275)
T ss_dssp CEEEECTTCSSSSHHHHHHHHHHHHHT--TCSEEEEECBCSS-SS-SCBCCHHHHHHHHHHHHHHHHHH------TSCCE
T ss_pred CEEeecCCCCCCCHHHHHHHHHHHHHc--CCcEEEECCCcCC-CC-CccCCHHHHHHHHHHHHHhHhhc------CCCeE
Confidence 57677621 222455333333333333 3788776422211 22 33445555666677777665432 45666
Q ss_pred EEecCCC-----------ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHH
Q 012517 320 VKIAPDL-----------SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMY 388 (462)
Q Consensus 320 vKispdl-----------~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~ 388 (462)
|--..|. ..++..+=+++..++|+|+|.+-.. .+.+.++++.
T Consensus 148 i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~---------------------------~~~~~~~~i~ 200 (275)
T 2ze3_A 148 LNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLA---------------------------LQSQDIRALA 200 (275)
T ss_dssp EEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC---------------------------CCHHHHHHHH
T ss_pred EEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCC---------------------------CCHHHHHHHH
Confidence 6555553 1346666777788999999975321 1356788899
Q ss_pred HhcCCCccEEEec--CCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCCCHH
Q 012517 389 LLTRGKIPLIGCG--GISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFKSII 454 (462)
Q Consensus 389 ~~~~~~ipIIg~G--GI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~si~ 454 (462)
+.+ ++|+-.+. +..+ ..++-+.|...|-++.+++.. ...-+.+-+.++ .++|+..+.
T Consensus 201 ~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra---a~~a~~~~~~~i-~~~g~~~~~ 259 (275)
T 2ze3_A 201 DAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA---TLGLVQRMAAEL-HAAEQSPLM 259 (275)
T ss_dssp HHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH---HHHHHHHHHHHH-HHHSCCHHH
T ss_pred Hhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH---HHHHHHHHHHHH-HHhCCcccc
Confidence 988 58876553 3444 467778999999877766431 233333333333 335544443
No 376
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.45 E-value=1.2 Score=43.36 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=59.0
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|+|.++=|+ |.-.....+.-.++++.+.+.. ..++||++=+... +-++..++++
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~-------~grvpviaGvg~~-~t~~ai~la~ 91 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTT----AESPTLTTDEKELILKTVIDLV-------DKRVPVIAGTGTN-DTEKSIQASI 91 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHH-------TTSSCEEEECCCS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cccccCCHHHHHHHHHHHHHHh-------CCCCcEEEeCCcc-cHHHHHHHHH
Confidence 4455555543 359999998653 3322334455567777777765 2478999988754 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+.+.|+|++.+....+.+
T Consensus 92 ~a~~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 92 QAKALGADAIMLITPYYNK 110 (292)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHHcCCCEEEECCCCCCC
Confidence 9999999999988655443
No 377
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=92.41 E-value=1.3 Score=43.57 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=59.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.++.+ .++||++=+..+- -++..++++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~~s-t~~ai~la~ 101 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTT----GESPTVNEDEREKLVSRTLEIVD-------GKIPVIVGAGTNS-TEKTLKLVK 101 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEcCCCcc-HHHHHHHHH
Confidence 45555555543 59999997653 32223344555677777777652 4789999998653 357788999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 102 ~A~~~Gadavlv~~P~y~~ 120 (306)
T 1o5k_A 102 QAEKLGANGVLVVTPYYNK 120 (306)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988665444
No 378
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=92.36 E-value=1.7 Score=42.51 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=60.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~-~t~~ai~la~ 100 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGST----GEAFVQSLSEREQVLEIVAEEAK-------GKIKLIAHVGCV-STAESQQLAA 100 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECeec----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCC-CHHHHHHHHH
Confidence 55555665543 59999997543 33333344556677787777652 478999998764 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 101 ~A~~~Gadavlv~~P~y~~ 119 (303)
T 2wkj_A 101 SAKRYGFDAVSAVTPFYYP 119 (303)
T ss_dssp HHHHHTCSEEEEECCCSSC
T ss_pred HHHhCCCCEEEecCCCCCC
Confidence 9999999999988655433
No 379
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.35 E-value=0.24 Score=50.82 Aligned_cols=67 Identities=22% Similarity=0.224 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHH
Q 012517 332 EDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYR 411 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e 411 (462)
.+.++.+.++|+|.|++. ++. |.+ +...+.++++++.+ ++|||+ |+|.|.++|..
T Consensus 146 ~e~~~~lveaGvdvIvld-ta~----------------G~~-----~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~ 200 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLD-SAH----------------GHS-----LNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKE 200 (400)
T ss_dssp CHHHHHHHHHTCSEEEEC-CSC----------------CSB-----HHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEe-CCC----------------CCc-----ccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHH
Confidence 467888999999987653 321 111 12357788888887 588875 78999999999
Q ss_pred HHHhCCCEEEEc
Q 012517 412 KIRAGATLVQLY 423 (462)
Q Consensus 412 ~i~aGAd~Vqv~ 423 (462)
++++|||+|-++
T Consensus 201 a~~aGAD~I~vG 212 (400)
T 3ffs_A 201 LIENGADGIKVG 212 (400)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 999999999984
No 380
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=92.35 E-value=1.4 Score=42.65 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=79.3
Q ss_pred CCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC----
Q 012517 250 KTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD---- 325 (462)
Q Consensus 250 k~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd---- 325 (462)
.++....+||++ .+++|.|++-+-..|- .+..+ +++.++-.++. ++++ .|.
T Consensus 49 glg~~~~~DlLe---~ag~yID~lKfg~GTs------~l~~~--l~ekI~l~~~~----------gV~v----~~GGTlf 103 (276)
T 1u83_A 49 GYPLQFFKDAIA---GASDYIDFVKFGWGTS------LLTKD--LEEKISTLKEH----------DITF----FFGGTLF 103 (276)
T ss_dssp SCCHHHHHHHHH---HHGGGCCEEEECTTGG------GGCTT--HHHHHHHHHHT----------TCEE----EECHHHH
T ss_pred CCCHHHHHHHHH---HhhhhcceEEecCcch------hhhHH--HHHHHHHHHHc----------CCeE----eCCcHHH
Confidence 367776667754 5788999999977542 23322 66666665543 4444 333
Q ss_pred ---CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 326 ---LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 326 ---l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
+....+.+..+.|.+.|+|.|-+++.++..+. +.-+++|+++++. +-++.-=|
T Consensus 104 E~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~--------------------~~~~~lI~~a~~~----f~Vl~EvG 159 (276)
T 1u83_A 104 EKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTN--------------------KEKAAYIADFSDE----FLVLSEVG 159 (276)
T ss_dssp HHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCH--------------------HHHHHHHHHHTTT----SEEEEECS
T ss_pred HHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCH--------------------HHHHHHHHHHHhh----cEEeeecc
Confidence 11236789999999999999999999865431 1123445544443 33444335
Q ss_pred CCCH------------HHHHHHHHhCCCEEEEch
Q 012517 403 ISSG------------EDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 403 I~s~------------~dA~e~i~aGAd~Vqv~T 424 (462)
..++ +.+...|+|||+.|++=.
T Consensus 160 ~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 193 (276)
T 1u83_A 160 SKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA 193 (276)
T ss_dssp CCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred ccCccccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 5444 456677889999999977
No 381
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=92.31 E-value=3.9 Score=40.81 Aligned_cols=135 Identities=11% Similarity=0.110 Sum_probs=92.1
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++.+.+ .+..+-+-+... +.+.-.+.+++++++. +.+..|+|-....++.++...+++
T Consensus 146 ~~~~~~~~~~~~g~~~~K~Kvg~~---------~~~~d~~~v~avr~~~-------g~~~~l~vDaN~~~~~~~A~~~~~ 209 (370)
T 2chr_A 146 DLDSAVEMIERRRHNRFKVKLGFR---------SPQDDLIHMEALSNSL-------GSKAYLRVDVNQAWDEQVASVYIP 209 (370)
T ss_dssp HHHHHHHHHHTTSCCEEEEECSSS---------CHHHHHHHHHHHHHHT-------TTTSEEEEECTTCCCTHHHHHHHH
T ss_pred hHHHHHHHHhhcccceeecccccC---------ChHHHHHHHHHHHHhc-------CCCcEEEecCCCCCCHHHHHHHHH
Confidence 55555555554 377777766421 1222234455555543 356788888877788888899999
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.++..|- . |+.+...+.++++++.+ ++||.+-=.+.+.+|..++++.|
T Consensus 210 ~l~~~~~~~iE-------e-------------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~~ 261 (370)
T 2chr_A 210 ELEALGVELIE-------Q-------------------PVGRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARDR 261 (370)
T ss_dssp HHHTTTCCEEE-------C-------------------CSCSSCHHHHHHHHHHC--SSEEEESSSCCSHHHHHHHHTTT
T ss_pred HHHhcCCceec-------C-------------------CCChhhhhhhhHHhhhc--cCCccCCccCCCHHHHHHHHHcC
Confidence 99998876541 1 22233567788999988 79999988999999999999987
Q ss_pred -CCEEEEchhhhhcCCChHHHH
Q 012517 417 -ATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 417 -Ad~Vqv~Tali~~GP~~i~~i 437 (462)
+|.+|+=-.-. .|..-..+|
T Consensus 262 a~d~i~~d~~~~-GGit~~~~i 282 (370)
T 2chr_A 262 SVDVFSLKLCNM-GGVSATQKI 282 (370)
T ss_dssp CCSEECCCHHHH-TSHHHHHHH
T ss_pred CCcEEEeCCccc-CCHHHHHHH
Confidence 89998876653 343333333
No 382
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=92.30 E-value=2.5 Score=42.82 Aligned_cols=114 Identities=7% Similarity=0.050 Sum_probs=82.1
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+..+-+.+...+ .+.-.+.+++|+++. +.+..|+|-....++.++..++++.+.+.++..|-
T Consensus 179 G~~~~Kikvg~~~---------~~~d~~~v~avR~~~-------G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~iE- 241 (388)
T 4h83_A 179 GLAGVKFKVGGLS---------AAEDAARITAAREAA-------GDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFE- 241 (388)
T ss_dssp TBSEEEEECSSSC---------HHHHHHHHHHHHHHH-------CSSSEEEEECTTCBCHHHHHHHHHHTTTSCCCCEE-
T ss_pred CCceEeecCCCCC---------HHHHHHHHHHHHHhc-------CCCeEEEEecCcCCCHHHHHHHHHHhhhcCcceee-
Confidence 4788888764321 122234566776664 45788888888778888888899888887765431
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCcc-chHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLS-LSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~-~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
. |+.+ ...+..+++++.+ .+||.+-=.+.+.+|+.++++.| +|.||+--.-
T Consensus 242 ------e-------------------P~~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~ 294 (388)
T 4h83_A 242 ------E-------------------PVEWHNDKRSMRDVRYQG--SVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSW 294 (388)
T ss_dssp ------S-------------------CBCSTTHHHHHHHHHHHS--SSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGG
T ss_pred ------c-------------------CcccccchHHHHHHHhhc--CCCccCCccccChHhHHHHHHcCCCCeEeeccee
Confidence 1 1111 1356678888888 79999999999999999999988 8999987655
No 383
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=92.28 E-value=2.3 Score=41.36 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=60.3
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCC-ccCCCC-CCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTT-ISRPDP-VSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt-~~r~~~-~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.+.||+.-+-+--.--++..+.+.+++.|+.|+ .|.. .+..|. +.. ...+.| ++ +..-.++|++.++
T Consensus 93 ~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv--~N~ptvglidG~fr~--~LEE~g-m~----~~~eve~I~~A~~-- 161 (286)
T 2p10_A 93 RHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV--QNFPTVGLIDGLFRQ--NLEETG-MS----YAQEVEMIAEAHK-- 161 (286)
T ss_dssp SSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE--EECSCGGGCCHHHHH--HHHHTT-CC----HHHHHHHHHHHHH--
T ss_pred CCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE--EECCCcccccchhhh--hHhhcC-CC----HHHHHHHHHHHHH--
Confidence 378999997653222367777899999999999 4532 121110 000 001121 11 1122344444444
Q ss_pred CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 392 RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 392 ~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
.-+..+.=++|.++|.++.++|+|.+-+.=++
T Consensus 162 ---~gL~Ti~~v~~~eeA~amA~agpDiI~~h~gl 193 (286)
T 2p10_A 162 ---LDLLTTPYVFSPEDAVAMAKAGADILVCHMGL 193 (286)
T ss_dssp ---TTCEECCEECSHHHHHHHHHHTCSEEEEECSC
T ss_pred ---CCCeEEEecCCHHHHHHHHHcCCCEEEECCCC
Confidence 44566667899999999999999998877663
No 384
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.27 E-value=1.7 Score=42.83 Aligned_cols=87 Identities=10% Similarity=0.068 Sum_probs=60.1
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
+.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..+++
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~-st~~ai~la 110 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGTT----GESPTLTHEEHKRIIELCVEQVA-------KRVPVVAGAGSN-STSEAVELA 110 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccc----cCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCC-CHHHHHHHH
Confidence 355555655543 59999987543 33333344555677777777652 478999988754 345788999
Q ss_pred HHHHHcCCcEEEEecCCccC
Q 012517 336 AVAVALRLDGLIISNTTISR 355 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r 355 (462)
+.+.+.|+|++.+....+.+
T Consensus 111 ~~A~~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 111 KHAEKAGADAVLVVTPYYNR 130 (315)
T ss_dssp HHHHHTTCSEEEEECCCSSC
T ss_pred HHHHhcCCCEEEECCCCCCC
Confidence 99999999999988655444
No 385
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=92.27 E-value=1.8 Score=42.99 Aligned_cols=93 Identities=16% Similarity=0.136 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC
Q 012517 314 GPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG 393 (462)
Q Consensus 314 ~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~ 393 (462)
.+.|+++.+..+.+.+ .+.+.+.+.|+|+|.+.-..... .. .. .|.+-+...++.++++++.+
T Consensus 115 ~~~pv~~~i~~~~~~~---~~~~~~~~~gad~i~i~~~~~~~--~~------~~----~~~~~~~~~~~~i~~vr~~~-- 177 (349)
T 1p0k_A 115 PNGLIFANLGSEATAA---QAKEAVEMIGANALQIHLNVIQE--IV------MP----EGDRSFSGALKRIEQICSRV-- 177 (349)
T ss_dssp SSSCEEEEEETTCCHH---HHHHHHHHTTCSEEEEEECTTTT--C------------------CTTHHHHHHHHHHHC--
T ss_pred CCceeEEeecCCCCHH---HHHHHHHhcCCCeEEecccchhh--hc------CC----CCCcchHHHHHHHHHHHHHc--
Confidence 4689999998655543 44566778899998664222110 00 00 12222222568899999988
Q ss_pred CccEEEe--cCCCCHHHHHHHHHhCCCEEEEc
Q 012517 394 KIPLIGC--GGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 394 ~ipIIg~--GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
++||+.= |...+.++|....++|||.|-+.
T Consensus 178 ~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 178 SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 6898874 56688999999999999999984
No 386
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.26 E-value=2.7 Score=39.58 Aligned_cols=135 Identities=16% Similarity=0.243 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC-h
Q 012517 251 TSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS-K 328 (462)
Q Consensus 251 ~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~-~ 328 (462)
.|+++.+-+.+-++.+.+ .+|.+++-+..|+.. -+.+.+.+|+++. ...|+.+--+-|.. .
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~-----iD~~~~~~Li~~a------------~~~~vTFHRAFD~~~~ 132 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSNNH-----IDTEAIEQLLPAT------------QGLPLVFHMAFDVIPK 132 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSS-----BCHHHHHHHHHHH------------TTCCEEECGGGGGSCT
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCC-----cCHHHHHHHHHHh------------CCCeEEEECchhccCC
Confidence 467766666665555555 399999988766431 2445666666543 25788777777754 1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED 408 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d 408 (462)
.+..+-.+.+.+.|++-|--+... .+.+ -...++.++++.+..++++-|+.-|||+ .+.
T Consensus 133 ~d~~~ale~L~~lGv~rILTSG~~-------------------~~~~-a~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~N 191 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRILLHGSS-------------------NGEP-IIENIKHIKALVEYANNRIEIMVGGGVT-AEN 191 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSCS-------------------SCCC-GGGGHHHHHHHHHHHTTSSEEEECSSCC-TTT
T ss_pred cCHHHHHHHHHHcCCCEEECCCCC-------------------CCCc-HHHHHHHHHHHHHhhCCCeEEEeCCCCC-HHH
Confidence 244566788889999998644221 1100 1124567777766666689999999997 566
Q ss_pred HHHHH-HhCCCEEEEc
Q 012517 409 AYRKI-RAGATLVQLY 423 (462)
Q Consensus 409 A~e~i-~aGAd~Vqv~ 423 (462)
+.+.+ .+|++-+-..
T Consensus 192 i~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 192 YQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHTCCEEEET
T ss_pred HHHHHHhhCCCEEccc
Confidence 66777 5899988853
No 387
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.23 E-value=1.6 Score=42.52 Aligned_cols=86 Identities=10% Similarity=0.073 Sum_probs=59.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|.|.++=|+ |.-.....+.-.++++.+.+..+ .++||++=+..+- -++..++++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~-t~~ai~la~ 90 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTT----GESATLNHDEHADVVMMTLDLAD-------GRIPVIAGTGANA-TAEAISLTQ 90 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSS-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCcc-HHHHHHHHH
Confidence 45555555443 59999988653 33333344556677777777652 4789999998653 357788999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 91 ~a~~~Gadavlv~~P~y~~ 109 (292)
T 2ojp_A 91 RFNDSGIVGCLTVTPYYNR 109 (292)
T ss_dssp HTTTSSCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999988655433
No 388
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=92.20 E-value=1.4 Score=43.51 Aligned_cols=86 Identities=10% Similarity=0.067 Sum_probs=59.2
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|.|.++=++ |.-.....+.-.++++.++++.+ .++||++=+..+ +-++..++++
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~-~t~~ai~la~ 113 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGST----GEGAYLSDPEWDEVVDFTLKTVA-------HRVPTIVSVSDL-TTAKTVRRAQ 113 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCC-CHHHHHHHHH
Confidence 55555555543 59999987543 33223344555677777777652 479999988754 3457889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 114 ~A~~~Gadavlv~~P~y~~ 132 (315)
T 3na8_A 114 FAESLGAEAVMVLPISYWK 132 (315)
T ss_dssp HHHHTTCSEEEECCCCSSC
T ss_pred HHHhcCCCEEEECCCCCCC
Confidence 9999999999987655433
No 389
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.16 E-value=0.74 Score=42.94 Aligned_cols=80 Identities=16% Similarity=0.148 Sum_probs=62.6
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
.||+.=+.. .+.++..++++.+.+.|++.|-++..+ +...+.++++++.++ +
T Consensus 16 ~~~i~v~r~-~~~~~~~~~~~al~~gGv~~iel~~k~-------------------------~~~~~~i~~l~~~~~-~- 67 (214)
T 1wbh_A 16 GPVVPVIVV-KKLEHAVPMAKALVAGGVRVLNVTLRT-------------------------ECAVDAIRAIAKEVP-E- 67 (214)
T ss_dssp CSEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEESCS-------------------------TTHHHHHHHHHHHCT-T-
T ss_pred CCEEEEEEC-CCHHHHHHHHHHHHHcCCCEEEEeCCC-------------------------hhHHHHHHHHHHHCc-C-
Confidence 466665654 344688999999999999999887442 114578888888885 3
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 396 PLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 396 pIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
.+++.|-+.+.+++...+++|||.|...
T Consensus 68 ~~vgagtvi~~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 68 AIVGAGTVLNPQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp SEEEEESCCSHHHHHHHHHHTCSCEEES
T ss_pred CEEeeCEEEEHHHHHHHHHcCCCEEEcC
Confidence 5688888999999999999999999755
No 390
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=92.16 E-value=1.4 Score=44.48 Aligned_cols=93 Identities=12% Similarity=0.031 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE--ecC--
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG--CGG-- 402 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg--~GG-- 402 (462)
+.+.|+.+.++|+|||-+.-.--... .... +....++||-- ..-....+++++.+++.++.+ ||.. +.+
T Consensus 163 f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~-N~R~D~yGGsl-enr~r~~~eiv~avr~~vg~~-~v~vrls~~~~ 239 (364)
T 1vyr_A 163 FRQAVANAREAGFDLVELHSAHGYLLHQFLSPSS-NQRTDQYGGSV-ENRARLVLEVVDAVCNEWSAD-RIGIRVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSH-HHHTHHHHHHHHHHHHHSCGG-GEEEEECCSSC
T ss_pred HHHHHHHHHHcCCCEEEEcCccchHHHhccCCcc-cccCCcCCcch-hcChhhHHHHHHHHHHhcCCC-cEEEEEccccc
Confidence 34445556889999998753210000 0000 00112445410 011123678899999999755 6655 221
Q ss_pred C-------CCHHH----HHHHHHhCCCEEEEchhh
Q 012517 403 I-------SSGED----AYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 403 I-------~s~~d----A~e~i~aGAd~Vqv~Tal 426 (462)
. .+.++ +.++-++|+|.+.+....
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 274 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 274 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 1 14445 333335899999998653
No 391
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.08 E-value=1.6 Score=42.71 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=59.3
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCC-CCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEG-PPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~-~~Pv~vKispdl~~~~~~~ia 335 (462)
.+.+.++.+. ..+|+|.++=++ |.-.....+.-.++++.+.+..+ . ++||++=+..+ +-++..+++
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------g~rvpviaGvg~~-~t~~ai~la 96 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTT----GESATLTHEEHRTCIEIAVETCK-------GTKVKVLAGAGSN-ATHEAVGLA 96 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTT----TTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEEECCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCCeEEEeCCCC-CHHHHHHHH
Confidence 4445555543 359999987643 33333344556677888777652 4 68999988754 345788999
Q ss_pred HHHHHcCCcEEEEecCCccC
Q 012517 336 AVAVALRLDGLIISNTTISR 355 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r 355 (462)
+.+++.|+|++.+....+.+
T Consensus 97 ~~a~~~Gadavlv~~P~y~~ 116 (301)
T 3m5v_A 97 KFAKEHGADGILSVAPYYNK 116 (301)
T ss_dssp HHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHcCCCEEEEcCCCCCC
Confidence 99999999999988655443
No 392
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.04 E-value=1.7 Score=40.84 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=60.3
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCcc
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIP 396 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ip 396 (462)
||+.=+..+ +.++..++++.+.+.|++.|-++..+ +...+.++++++.++ + -
T Consensus 27 ~ii~V~r~~-~~~~~~~~~~al~~gGv~~iel~~k~-------------------------~~~~~~i~~l~~~~~-~-~ 78 (225)
T 1mxs_A 27 RILPVITIA-REEDILPLADALAAGGIRTLEVTLRS-------------------------QHGLKAIQVLREQRP-E-L 78 (225)
T ss_dssp SEEEEECCS-CGGGHHHHHHHHHHTTCCEEEEESSS-------------------------THHHHHHHHHHHHCT-T-S
T ss_pred CEEEEEeCC-CHHHHHHHHHHHHHCCCCEEEEecCC-------------------------ccHHHHHHHHHHhCc-c-c
Confidence 444444432 45588999999999999999887432 114577888888885 3 4
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 397 LIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 397 IIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
+++.|-+.+.+++...+++||+.|...
T Consensus 79 ~igagtvl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 79 CVGAGTVLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp EEEEECCCSHHHHHHHHHHTCSSEECS
T ss_pred EEeeCeEeeHHHHHHHHHCCCCEEEeC
Confidence 578888999999999999999999654
No 393
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.93 E-value=1.2 Score=43.66 Aligned_cols=86 Identities=16% Similarity=0.074 Sum_probs=58.8
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+.++.+ .++||++=+..+ +-++..++++
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~-~t~~ai~la~ 89 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTT----GESPTLTEEEHKRVVALVAEQAQ-------GRVPVIAGAGSN-NPVEAVRYAQ 89 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEccCCC-CHHHHHHHHH
Confidence 44555555433 59999987543 33323344556677777777652 468999999865 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 90 ~A~~~Gadavlv~~P~y~~ 108 (297)
T 2rfg_A 90 HAQQAGADAVLCVAGYYNR 108 (297)
T ss_dssp HHHHHTCSEEEECCCTTTC
T ss_pred HHHhcCCCEEEEcCCCCCC
Confidence 9999999999988654433
No 394
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=91.88 E-value=13 Score=38.54 Aligned_cols=128 Identities=14% Similarity=0.194 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEec----CCCChh
Q 012517 254 DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA----PDLSKE 329 (462)
Q Consensus 254 ~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis----pdl~~~ 329 (462)
+..+.+++.+.... .|.+.|-.++ | +.+.+.+.++.+++. ...+.+=++ +-.+.+
T Consensus 100 dv~~~~v~~a~~~G--vd~i~if~~~-s--------d~~ni~~~i~~ak~~----------G~~v~~~i~~~~~~~~~~e 158 (464)
T 2nx9_A 100 DVVDTFVERAVKNG--MDVFRVFDAM-N--------DVRNMQQALQAVKKM----------GAHAQGTLCYTTSPVHNLQ 158 (464)
T ss_dssp HHHHHHHHHHHHTT--CCEEEECCTT-C--------CTHHHHHHHHHHHHT----------TCEEEEEEECCCCTTCCHH
T ss_pred hhhHHHHHHHHhCC--cCEEEEEEec-C--------HHHHHHHHHHHHHHC----------CCEEEEEEEeeeCCCCCHH
Confidence 33456666665554 8887765443 1 113444555544432 334444443 224567
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe----cCCCC
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC----GGISS 405 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~----GGI~s 405 (462)
.+.++++.+.+.|+|-|.+..|. |.+. .....++++.+++.+ ++||-.= -|..
T Consensus 159 ~~~~~a~~l~~~Gad~I~l~DT~----------------G~~~----P~~v~~lv~~l~~~~--~~~i~~H~Hnd~GlA- 215 (464)
T 2nx9_A 159 TWVDVAQQLAELGVDSIALKDMA----------------GILT----PYAAEELVSTLKKQV--DVELHLHCHSTAGLA- 215 (464)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETT----------------SCCC----HHHHHHHHHHHHHHC--CSCEEEEECCTTSCH-
T ss_pred HHHHHHHHHHHCCCCEEEEcCCC----------------CCcC----HHHHHHHHHHHHHhc--CCeEEEEECCCCChH-
Confidence 88999999999999999888764 1111 123567888998888 5676443 2332
Q ss_pred HHHHHHHHHhCCCEEEEchh
Q 012517 406 GEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 406 ~~dA~e~i~aGAd~Vqv~Ta 425 (462)
-.-++..+++||+.|+..-.
T Consensus 216 vAN~laAv~AGa~~VD~ti~ 235 (464)
T 2nx9_A 216 DMTLLKAIEAGVDRVDTAIS 235 (464)
T ss_dssp HHHHHHHHHTTCSEEEEBCG
T ss_pred HHHHHHHHHhCCCEEEEecc
Confidence 34577888999999987644
No 395
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=91.85 E-value=1.5 Score=42.80 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=59.6
Q ss_pred HHHHHHHHHcc--cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLSQ--YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~~--~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.++.+ .++||++=+..+- -++..+++
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~-t~~ai~la 92 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGST----GENFMLSTEEKKEIFRIAKDEAK-------DQIALIAQVGSVN-LKEAVELG 92 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSC-HHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEeCccc----cchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEecCCCC-HHHHHHHH
Confidence 45555565544 59999997543 33223344555677777777652 4789999998753 35778999
Q ss_pred HHHHHcCCcEEEEecCCccC
Q 012517 336 AVAVALRLDGLIISNTTISR 355 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r 355 (462)
+.+++.|+|++.+....+.+
T Consensus 93 ~~a~~~Gadavlv~~P~y~~ 112 (293)
T 1f6k_A 93 KYATELGYDCLSAVTPFYYK 112 (293)
T ss_dssp HHHHHHTCSEEEEECCCSSC
T ss_pred HHHHhcCCCEEEECCCCCCC
Confidence 99999999999988655433
No 396
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.70 E-value=11 Score=37.00 Aligned_cols=149 Identities=12% Similarity=0.047 Sum_probs=80.3
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcc-cCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQ-YADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPP 316 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~-~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 316 (462)
||.+.+-- .. +++. ..+.++++.+ .++++.| .+. |..+|+..-+.--...+.++.|+.+++.. .+.
T Consensus 85 PviaD~d~Gyg-~~~~---v~~~v~~l~~aGaagv~iEDq~~-~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~-----~~~ 154 (298)
T 3eoo_A 85 PLLVDIDTGWG-GAFN---IARTIRSFIKAGVGAVHLEDQVG-QKRCGHRPGKECVPAGEMVDRIKAAVDAR-----TDE 154 (298)
T ss_dssp CEEEECTTCSS-SHHH---HHHHHHHHHHTTCSEEEEECBCC-CCCTTCCCCCCBCCHHHHHHHHHHHHHHC-----SST
T ss_pred eEEEECCCCCC-CHHH---HHHHHHHHHHhCCeEEEECCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHhc-----cCC
Confidence 56666621 11 4543 3333444433 3787766 332 43333322111122344444554444321 134
Q ss_pred CEEEEecCCCC----hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC
Q 012517 317 PLLVKIAPDLS----KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 317 Pv~vKispdl~----~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~ 392 (462)
+++|--+.|.- .++..+=+++..++|+|+|.+-.- .+.+.++++.+.+
T Consensus 155 ~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~---------------------------~~~ee~~~~~~~~- 206 (298)
T 3eoo_A 155 TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM---------------------------KTLDDYRRFKEAV- 206 (298)
T ss_dssp TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC---------------------------CSHHHHHHHHHHH-
T ss_pred CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC---------------------------CCHHHHHHHHHHc-
Confidence 55554444421 234555566678999999976421 1457788888888
Q ss_pred CCccEEEe---cCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 393 GKIPLIGC---GGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 393 ~~ipIIg~---GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++|+.++ +|-+..-...+.-+.|...|-++..++.
T Consensus 207 -~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 207 -KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYR 244 (298)
T ss_dssp -CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHH
T ss_pred -CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 4787654 4432223456777899999988877754
No 397
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.46 E-value=6.3 Score=38.74 Aligned_cols=147 Identities=13% Similarity=0.062 Sum_probs=82.3
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEe--cc---CCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCC
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVIN--VS---SPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEG 314 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiN--vS---sPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~ 314 (462)
||.+.+---=-+++ ...+.++++.+ .++++.|- +. |.+.+|. .+-..+ +.++.|+.+++. +.
T Consensus 91 pviaD~d~Gyg~~~---~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk-~l~~~~---e~~~rI~Aa~~A-----~~ 158 (305)
T 3ih1_A 91 PVLVDIDTGFGGVL---NVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGK-KLVTTE---ELVQKIKAIKEV-----AP 158 (305)
T ss_dssp CEEEECTTCSSSHH---HHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCC-CBCCHH---HHHHHHHHHHHH-----CT
T ss_pred CEEEECCCCCCCHH---HHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCC-cccCHH---HHHHHHHHHHHc-----CC
Confidence 56666621001344 33444444443 38887773 22 3333322 233333 444445444432 23
Q ss_pred CCCEEEEecCC--CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC
Q 012517 315 PPPLLVKIAPD--LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 315 ~~Pv~vKispd--l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~ 392 (462)
+.-|..|.-.. ...++..+=+++..++|+|+|.+-.- .+.+.++++.+.+
T Consensus 159 ~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~---------------------------~~~~~~~~i~~~~- 210 (305)
T 3ih1_A 159 SLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL---------------------------QSEEEFRLFNSKV- 210 (305)
T ss_dssp TSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC---------------------------CSHHHHHHHHHHS-
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC---------------------------CCHHHHHHHHHHc-
Confidence 44444454321 12356777788889999999986311 1457788999998
Q ss_pred CCccEEEe---cCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 393 GKIPLIGC---GGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 393 ~~ipIIg~---GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
++|++++ +|-+-.-.+.+.-+.|...|-++.+++.
T Consensus 211 -~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 248 (305)
T 3ih1_A 211 -NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLR 248 (305)
T ss_dssp -CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHH
T ss_pred -CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHH
Confidence 5888753 4432223456777899999988877754
No 398
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=91.43 E-value=0.56 Score=46.15 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCcEEEEe-cCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 332 EDIAAVAVALRLDGLIIS-NTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivs-NTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
.++|+..++.|++.|.+- |.+.+. ...||. .+..+.+.|+++++.+ ++||++-++|..-+++.
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di----------~~~~g~----~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide~q 94 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSEL----------RNTDGV----ARSVDPLKIEEIRKCI--SINVLAKVRIGHFVEAQ 94 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---------------CCCC----CCCCCHHHHHHHHTTC--CSEEEEEEETTCHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcc----------hhcCCc----ccCCCHHHHHHHHHhc--CCCEEEeccCCcHHHHH
Confidence 377899999999998764 321110 012331 1334689999999999 79999999999999999
Q ss_pred HHHHhCCCEE
Q 012517 411 RKIRAGATLV 420 (462)
Q Consensus 411 e~i~aGAd~V 420 (462)
.+..+|||.|
T Consensus 95 il~aaGAD~I 104 (297)
T 4adt_A 95 ILEELKVDML 104 (297)
T ss_dssp HHHHTTCSEE
T ss_pred HHHHcCCCEE
Confidence 9999999999
No 399
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.39 E-value=0.38 Score=48.36 Aligned_cols=80 Identities=13% Similarity=0.182 Sum_probs=54.7
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHc--CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 317 PLLVKIAPDLSKEDLEDIAAVAVAL--RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 317 Pv~vKispdl~~~~~~~ia~~~~~~--GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++.+-+.. +.++. +.++.+.+. |+|.|.++-+. | . .+...+.++++++.++ +
T Consensus 108 ~v~~~~g~--~~~~~-~~~~~l~~~~~g~~~i~i~~~~-----------------g---~--~~~~~~~i~~lr~~~~-~ 161 (351)
T 2c6q_A 108 HLAASSGT--GSSDF-EQLEQILEAIPQVKYICLDVAN-----------------G---Y--SEHFVEFVKDVRKRFP-Q 161 (351)
T ss_dssp TEEEEECS--SHHHH-HHHHHHHHHCTTCCEEEEECSC-----------------T---T--BHHHHHHHHHHHHHCT-T
T ss_pred eeEeecCC--ChHHH-HHHHHHHhccCCCCEEEEEecC-----------------C---C--cHHHHHHHHHHHHhcC-C
Confidence 45555532 22333 445566665 89987764221 1 0 1235678999999885 5
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
+||+ +|+|.|.+||...+++|||.|-++
T Consensus 162 ~~vi-~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 162 HTIM-AGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp SEEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CeEE-EEeCCCHHHHHHHHHhCCCEEEEC
Confidence 8887 578999999999999999999774
No 400
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=91.27 E-value=7.6 Score=38.11 Aligned_cols=168 Identities=11% Similarity=0.146 Sum_probs=98.3
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 242 LGVNIGKNKTSEDAAADYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 242 lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
+.+-+...| +.+..+.+.+.++++.++ .|++.|--+... . .+..-.++...++ . ..++.+.
T Consensus 15 ~S~E~~PPk-~~~~~~~l~~~~~~L~~~~pd~vsVT~~~~g----~---~r~~t~~~a~~i~-~---------~g~~~i~ 76 (310)
T 3apt_A 15 FSFEFFPPK-DPEGEEALFRTLEELKAFRPAFVSITYGAMG----S---TRERSVAWAQRIQ-S---------LGLNPLA 76 (310)
T ss_dssp EEEEECCCS-SHHHHHHHHHHHHHHGGGCCSEEEECCCSTT----C---SHHHHHHHHHHHH-H---------TTCCBCE
T ss_pred EEEEEeCCC-CcchHHHHHHHHHHHhcCCCCEEEEecCCCC----C---cchhHHHHHHHHH-H---------hCCCeEE
Confidence 444444322 444456777888888875 799777543211 1 1222334555554 2 2466666
Q ss_pred EecC-CCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 321 KIAP-DLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 321 Kisp-dl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
=++. |.+.+++.+++..+.+.|++-|.+--...... .. ......+| +..+.++|+.+++..+..+ -||
T Consensus 77 Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~--~g--~~~~~~~~------f~~a~~Lv~~ir~~~g~~f-~ig 145 (310)
T 3apt_A 77 HLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRG--ER--VFRPHPEG------FRYAAELVALIRERYGDRV-SVG 145 (310)
T ss_dssp EEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTT--CC--SCCCCTTS------CSSHHHHHHHHHHHHGGGS-EEE
T ss_pred EeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCC--CC--CCCCCCCC------CCCHHHHHHHHHHhCCCCe-EEE
Confidence 6664 67778999999999999999987763321110 00 00001111 3468899999988743124 445
Q ss_pred ecCC-------CCHH----HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 400 CGGI-------SSGE----DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 400 ~GGI-------~s~~----dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+.+- .+.+ -..+++++||+.+ -|-++| +++.+.++.+.+
T Consensus 146 vA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~--iTQ~ff-D~~~~~~f~~~~ 195 (310)
T 3apt_A 146 GAAYPEGHPESESLEADLRHFKAKVEAGLDFA--ITQLFF-NNAHYFGFLERA 195 (310)
T ss_dssp EEECTTCCTTSSCHHHHHHHHHHHHHHHCSEE--EECCCS-CHHHHHHHHHHH
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEE--EecccC-CHHHHHHHHHHH
Confidence 5443 3443 3457788999955 566766 566666665543
No 401
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=91.23 E-value=1.5 Score=43.73 Aligned_cols=96 Identities=21% Similarity=0.259 Sum_probs=50.4
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++.+|+.++ |+.+.++|+|||-+.-.--... .+.. +.-..++|| |=..-....+++++.+++.+ +
T Consensus 134 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGG-slenR~r~~~eiv~avr~~v--~ 209 (340)
T 3gr7_A 134 MTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLS-NRRQDEYGG-SPENRYRFLGEVIDAVREVW--D 209 (340)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTT-CCCCSTTSS-SHHHHHHHHHHHHHHHHHHC--C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCcc-CcCCCcccC-CHHHHHHHHHHHHHHHHHhc--C
Confidence 555555433 4456789999998763310000 0000 001124555 20001123578899999998 5
Q ss_pred ccEEE--e------cCC--CCHHHHHHHH-HhCCCEEEEchh
Q 012517 395 IPLIG--C------GGI--SSGEDAYRKI-RAGATLVQLYTA 425 (462)
Q Consensus 395 ipIIg--~------GGI--~s~~dA~e~i-~aGAd~Vqv~Ta 425 (462)
+||.. + ||. .+..+..+.+ ++|+|.+.+..+
T Consensus 210 ~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g 251 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSG 251 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECC
T ss_pred CceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 66543 1 232 2333444444 489999999754
No 402
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=91.16 E-value=1 Score=45.89 Aligned_cols=117 Identities=20% Similarity=0.188 Sum_probs=69.7
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCcc---CC-----C-CCCCCC---c-c------ccc---CCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTIS---RP-----D-PVSKNP---V-A------KET---GGLS 372 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~---r~-----~-~~~~~~---~-~------~~~---GGlS 372 (462)
+.|+++-+-..-+.+...++++.+++.|+++++++=.... |. . .++... . . ... ++-+
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 5689999854445567889999999999999988632211 00 0 000000 0 0 000 1111
Q ss_pred C--Cc-----CccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchh---hhhcCCChH
Q 012517 373 G--KP-----LLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTA---FAYGGPALI 434 (462)
Q Consensus 373 G--~~-----l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Ta---li~~GP~~i 434 (462)
+ .. -.....+.|+.+++.+ ++||+.- ||.+.+||....++|||.|-+... -.+.||..+
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~ 294 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLT--SLPIVAK-GILRGDDAREAVKHGLNGILVSNHGARQLDGVPATI 294 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--C--CSCEEEE-EECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhh--CCCEEEE-ecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH
Confidence 1 00 1124678899999988 6888865 578999999999999999999322 123456544
No 403
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.08 E-value=3.8 Score=40.10 Aligned_cols=162 Identities=12% Similarity=0.087 Sum_probs=87.3
Q ss_pred HHHHHHcccCcEEEEe-ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC-hhhHHHHHHHH
Q 012517 261 QGVHTLSQYADYLVIN-VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS-KEDLEDIAAVA 338 (462)
Q Consensus 261 ~~~~~l~~~aD~leiN-vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~-~~~~~~ia~~~ 338 (462)
..+++++ +|.|-+- .|.-+.-|..+.. .-.+.+++..++..++ ..+.||++-+.-.+. .+++.+.++.+
T Consensus 33 ~~~~~aG--~~ai~vsg~~~a~~lG~pD~~-~vt~~em~~~~~~I~~------~~~~PviaD~d~Gyg~~~~v~~~v~~l 103 (295)
T 1s2w_A 33 RIVQEAG--FKGIWGSGLSVSAQLGVRDSN-EASWTQVVEVLEFMSD------ASDVPILLDADTGYGNFNNARRLVRKL 103 (295)
T ss_dssp HHHHHHT--CSCEEECCHHHHHTC----------CHHHHHHHHHHHH------TCSSCEEEECCSSCSSHHHHHHHHHHH
T ss_pred HHHHHcC--CCEEEeChHHHHHhCCCCCCC-CCCHHHHHHHHHHHHh------cCCCCEEecCCCCCCCHHHHHHHHHHH
Confidence 3444444 8888775 2221234444421 1234456666655543 247899999875543 34677888888
Q ss_pred HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccch--HHHHHHHHHhc-CCCccEEEecCCC----CHH----
Q 012517 339 VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS--NNILKEMYLLT-RGKIPLIGCGGIS----SGE---- 407 (462)
Q Consensus 339 ~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~a--l~~v~~i~~~~-~~~ipIIg~GGI~----s~~---- 407 (462)
.++|++||.+=.... ++.....|| .++.+.|.. .+.|+.+++.- .+++-|++=.--. ..+
T Consensus 104 ~~aGaagv~iED~~~--------~k~cgH~gg-~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~ 174 (295)
T 1s2w_A 104 EDRGVAGACLEDKLF--------PKTNSLHDG-RAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALK 174 (295)
T ss_dssp HHTTCCEEEEECBCC----------------C-TTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHH
T ss_pred HHcCCcEEEECCCCC--------CccccccCC-CCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHH
Confidence 999999998865431 111112233 346777765 44455555443 2345565533222 124
Q ss_pred HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 408 dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+|..+.++|||+|.+=..+ ..+..++++.+++.
T Consensus 175 Ra~ay~eAGAd~i~~e~~~--~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 175 RAEAYRNAGADAILMHSKK--ADPSDIEAFMKAWN 207 (295)
T ss_dssp HHHHHHHTTCSEEEECCCS--SSSHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCC--CCHHHHHHHHHHcC
Confidence 4556678999999885432 23556777776664
No 404
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=91.07 E-value=0.43 Score=44.28 Aligned_cols=120 Identities=13% Similarity=0.143 Sum_probs=72.8
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++.+.+ .++.||+++.+|+. .+.++.+++ .+..+..-. -++ .+-++
T Consensus 26 ~~~~~~~~l~~gGv~~iel~~k~~~~------------~~~i~~~~~----------~~~~~gag~--vl~----~d~~~ 77 (207)
T 2yw3_A 26 DLLGLARVLEEEGVGALEITLRTEKG------------LEALKALRK----------SGLLLGAGT--VRS----PKEAE 77 (207)
T ss_dssp CHHHHHHHHHHTTCCEEEEECSSTHH------------HHHHHHHTT----------SSCEEEEES--CCS----HHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCChHH------------HHHHHHHhC----------CCCEEEeCe--Eee----HHHHH
Confidence 56666776655 39999999877642 233444332 123333332 233 25578
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.|+|+|+..++ ..++++..++ . .+++|- |+.|++++.+..++|
T Consensus 78 ~A~~~GAd~v~~~~~----------------------------d~~v~~~~~~-~--g~~~i~--G~~t~~e~~~A~~~G 124 (207)
T 2yw3_A 78 AALEAGAAFLVSPGL----------------------------LEEVAALAQA-R--GVPYLP--GVLTPTEVERALALG 124 (207)
T ss_dssp HHHHHTCSEEEESSC----------------------------CHHHHHHHHH-H--TCCEEE--EECSHHHHHHHHHTT
T ss_pred HHHHcCCCEEEcCCC----------------------------CHHHHHHHHH-h--CCCEEe--cCCCHHHHHHHHHCC
Confidence 888999999975432 1233343443 4 356553 389999999999999
Q ss_pred CCEEEEchhhhhcCCChHHHHH
Q 012517 417 ATLVQLYTAFAYGGPALIPQIK 438 (462)
Q Consensus 417 Ad~Vqv~Tali~~GP~~i~~i~ 438 (462)
||.|.++.+-...|+..++.++
T Consensus 125 ad~v~~fpa~~~gG~~~lk~l~ 146 (207)
T 2yw3_A 125 LSALKFFPAEPFQGVRVLRAYA 146 (207)
T ss_dssp CCEEEETTTTTTTHHHHHHHHH
T ss_pred CCEEEEecCccccCHHHHHHHH
Confidence 9999996532222444444443
No 405
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=91.07 E-value=2 Score=42.04 Aligned_cols=161 Identities=9% Similarity=0.052 Sum_probs=89.8
Q ss_pred HHHHHHHcccCcEEEEe-ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHHHHHHH
Q 012517 260 VQGVHTLSQYADYLVIN-VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLEDIAAV 337 (462)
Q Consensus 260 ~~~~~~l~~~aD~leiN-vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~~ia~~ 337 (462)
+..+++++ +|.|-+- .|.-++-|..+. ..-.+.+++..++..++ ..+.||++-+.-.+ +.+++.+.++.
T Consensus 28 A~~~~~aG--~~ai~vs~~~~a~~~G~pD~-~~vt~~em~~~~~~I~~------~~~~PviaD~d~Gyg~~~~~~~~v~~ 98 (290)
T 2hjp_A 28 AKLAEQAG--FGGIWGSGFELSASYAVPDA-NILSMSTHLEMMRAIAS------TVSIPLIADIDTGFGNAVNVHYVVPQ 98 (290)
T ss_dssp HHHHHHHT--CSEEEECHHHHHHHTTSCTT-TCSCHHHHHHHHHHHHT------TCSSCEEEECTTTTSSHHHHHHHHHH
T ss_pred HHHHHHcC--CCEEEEChHHHHHhCCCCCC-CCCCHHHHHHHHHHHHh------cCCCCEEEECCCCCCCHHHHHHHHHH
Confidence 33455554 8888774 111111344332 12235566666666553 34789998887654 34577888888
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC--CCcCccch--HHHHHHHHHhc-CCCccEEEecCCC----CHHH
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS--GKPLLSLS--NNILKEMYLLT-RGKIPLIGCGGIS----SGED 408 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS--G~~l~~~a--l~~v~~i~~~~-~~~ipIIg~GGI~----s~~d 408 (462)
+.++|++||.+=.... ++ ..|-+. |+.+.|.. .+.|+.+++.. .+++-|++=.--. ..++
T Consensus 99 l~~aGa~gv~iED~~~--------~k---~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ 167 (290)
T 2hjp_A 99 YEAAGASAIVMEDKTF--------PK---DTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQE 167 (290)
T ss_dssp HHHHTCSEEEEECBCS--------SC---CC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHH
T ss_pred HHHhCCeEEEEcCCCC--------Cc---cccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHH
Confidence 9999999998865431 11 123333 67777765 33444444442 1345555533222 1344
Q ss_pred H----HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHH
Q 012517 409 A----YRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 442 (462)
Q Consensus 409 A----~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~ 442 (462)
+ ..+.++|||+|.+=..+ ..+..++++.+++.
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~--~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQ--KTPDEILAFVKSWP 203 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC--SSSHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCcEEEeCCCC--CCHHHHHHHHHHcC
Confidence 4 45667899999875533 23566677766654
No 406
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=90.94 E-value=2 Score=43.20 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE--e--c-
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG--C--G- 401 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg--~--G- 401 (462)
..+.|+.+.++|+|||-+.-.--... .+.. +....++|| |=..-....+++++.+++.++.+ ||.. + +
T Consensus 163 f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~-N~R~D~yGG-slenr~r~~~eiv~avr~~vg~~-pv~vris~~~~ 239 (365)
T 2gou_A 163 YRQAALNAMEAGFDGIELHAANGYLINQFIDSEA-NNRSDEYGG-SLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGG-CCCCSTTSS-SHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCC
T ss_pred HHHHHHHHHHcCCCEEEEecccchhHhhccCCCc-cCcCcccCc-chhhhHHHHHHHHHHHHHHcCCC-cEEEEEccccc
Confidence 34455556889999999853210000 0000 001123454 10001123568889999998655 6655 2 2
Q ss_pred -----CCCCHHH----HHHHHHhCCCEEEEchhh
Q 012517 402 -----GISSGED----AYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 402 -----GI~s~~d----A~e~i~aGAd~Vqv~Tal 426 (462)
+=.+.++ +...-++|+|.+.+....
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 273 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD 273 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 1124455 333446899999998754
No 407
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=90.78 E-value=2.1 Score=46.37 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE-------
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG------- 399 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg------- 399 (462)
+.+-|+.+.++|+|||-+...-.... .+.. +....++|| |=..-....+++++.+++.++.++||+.
T Consensus 143 ~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~-n~r~d~yGg-s~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 143 FARCAQLAREAGYDGVEVMGSEGYLINEFLTLRT-NQRSDQWGG-DYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTT-CCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhCCCcc-CCCcCcCCC-cHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 33445556789999998753210000 0000 011124555 1001112367899999999987888754
Q ss_pred -ecCCCCHHHHHHHH----HhCCCEEEEchh
Q 012517 400 -CGGISSGEDAYRKI----RAGATLVQLYTA 425 (462)
Q Consensus 400 -~GGI~s~~dA~e~i----~aGAd~Vqv~Ta 425 (462)
-||. +.+++.++. ++|+|.+.+..+
T Consensus 221 ~~~g~-~~~~~~~~a~~l~~~g~d~i~v~~~ 250 (671)
T 1ps9_A 221 VEDGG-TFAETVELAQAIEAAGATIINTGIG 250 (671)
T ss_dssp STTCC-CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CCCCC-CHHHHHHHHHHHHhcCCCEEEcCCC
Confidence 3565 455554433 589999988643
No 408
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=90.68 E-value=1.3 Score=43.21 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=58.9
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.+..+ .++||++=+..+ +-++..++++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~-------gr~pvi~Gvg~~-~t~~ai~la~ 90 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTT----GEATTMTETERKETIKFVIDKVN-------KRIPVIAGTGSN-NTAASIAMSK 90 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcc-cHHHHHHHHH
Confidence 44455555433 59999987543 32223344555677777777652 478999999865 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 91 ~a~~~Gadavlv~~P~y~~ 109 (291)
T 3a5f_A 91 WAESIGVDGLLVITPYYNK 109 (291)
T ss_dssp HHHHTTCSEEEEECCCSSC
T ss_pred HHHhcCCCEEEEcCCCCCC
Confidence 9999999999988655433
No 409
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.64 E-value=2.9 Score=41.06 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=57.8
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|+|.++=|+ |.-.....+.-.++++.+.+.. ..++||++=+... +-++..++++
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~-------~grvpviaGvg~~-~t~~ai~la~ 97 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANF----SEQFAITDDERDVLTRTILEHV-------AGRVPVIVTTSHY-STQVCAARSL 97 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGG----GTGGGSCHHHHHHHHHHHHHHH-------TTSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cCcccCCHHHHHHHHHHHHHHh-------CCCCcEEEecCCc-hHHHHHHHHH
Confidence 4555555553 359999997543 3333334455567777777765 2479999999764 3457789999
Q ss_pred HHHHcCCcEEEEecCC
Q 012517 337 VAVALRLDGLIISNTT 352 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt 352 (462)
.+++.|+|++.+....
T Consensus 98 ~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 98 RAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHTTCSEEEECCSC
T ss_pred HHHHcCCCEEEEcCCC
Confidence 9999999999987554
No 410
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.60 E-value=1.3 Score=42.87 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=71.9
Q ss_pred CCCEEEEec-CCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc-c-----cccCCCCCCcCccchHHHHHHH
Q 012517 315 PPPLLVKIA-PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV-A-----KETGGLSGKPLLSLSNNILKEM 387 (462)
Q Consensus 315 ~~Pv~vKis-pdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~-~-----~~~GGlSG~~l~~~al~~v~~i 387 (462)
++.++.=|. .|-+.+...++++.+.+.|+|.|.+..... |++..-+. . ....|.+ ....++.++++
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfS---DP~aDGp~Iq~a~~~AL~~G~~----~~~~~~~v~~i 89 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFS---DPLADGPVIQGANLRSLAAGTT----SSDCFDIITKV 89 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCS---CCTTCCHHHHHHHHHHHHTTCC----HHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC---CCCCCCHHHHHHHHHHHHcCCC----HHHHHHHHHHH
Confidence 445555554 445556889999999999999999987652 22211111 0 0112322 12347888999
Q ss_pred HHh-cCCCccEEEecCCCCH-------HHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 388 YLL-TRGKIPLIGCGGISSG-------EDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 388 ~~~-~~~~ipIIg~GGI~s~-------~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
|+. . ++||+.-+ -.++ +-+.++.++|+|.|-+-. ++-+=.+++.+.++++|.+
T Consensus 90 r~~~~--~~Pivlm~-Y~npv~~~g~e~f~~~~~~aGvdgvii~D--------lp~ee~~~~~~~~~~~gl~ 150 (267)
T 3vnd_A 90 RAQHP--DMPIGLLL-YANLVFANGIDEFYTKAQAAGVDSVLIAD--------VPVEESAPFSKAAKAHGIA 150 (267)
T ss_dssp HHHCT--TCCEEEEE-CHHHHHHHCHHHHHHHHHHHTCCEEEETT--------SCGGGCHHHHHHHHHTTCE
T ss_pred HhcCC--CCCEEEEe-cCcHHHHhhHHHHHHHHHHcCCCEEEeCC--------CCHhhHHHHHHHHHHcCCe
Confidence 987 5 78988874 2232 336666789999987743 2222234555666666653
No 411
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=90.52 E-value=5.4 Score=39.87 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-Chh
Q 012517 251 TSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKE 329 (462)
Q Consensus 251 ~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~ 329 (462)
.+++.+.+.++.++.+-+ .-+-+|+.++..+.. +.+.+.++.+.+...+++. ..|+. .|.+ ..+
T Consensus 45 ~s~~~l~~~i~~~~~~~~--~p~gVnl~~~~~~~~----~~~~~~~~~~~l~~~~~~~------g~~~~---~~~~~~~~ 109 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTG--RPFGVNVFMPQPELA----ESGAVEVYAHQLAGEAAWY------ETELG---DPDGGRDD 109 (369)
T ss_dssp SCHHHHHHHHHHHHHHCC--SCEEEEEECCCCCC-------CHHHHHHHHTHHHHHHT------TCCCC---CSCSCSST
T ss_pred CCHHHHHHHHHHHHHhCC--CCeEEEEecCCCCcc----cHHHHHHHHHHHHHHHHHc------CCCcC---cccccccc
Confidence 477755555554444432 346788877654321 3344555555565555443 23321 1222 123
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
.+.+.++.+.+.|+|.|.++-.. + ..+.++++++. +++|+. .+.+.+++
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~----------------------~----~~~~i~~~~~~---g~~v~~--~v~t~~~a 158 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGV----------------------P----DREVIARLRRA---GTLTLV--TATTPEEA 158 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSC----------------------C----CHHHHHHHHHT---TCEEEE--EESSHHHH
T ss_pred cHHHHHHHHHhcCCCEEEEeCCC----------------------C----cHHHHHHHHHC---CCeEEE--ECCCHHHH
Confidence 46788899999999999875321 0 23566777763 466665 47899999
Q ss_pred HHHHHhCCCEEEE
Q 012517 410 YRKIRAGATLVQL 422 (462)
Q Consensus 410 ~e~i~aGAd~Vqv 422 (462)
....++|+|.|.+
T Consensus 159 ~~a~~~GaD~i~v 171 (369)
T 3bw2_A 159 RAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999998
No 412
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=90.48 E-value=2.1 Score=42.08 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=61.4
Q ss_pred chHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC--CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCccccc
Q 012517 291 RKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD--LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKET 368 (462)
Q Consensus 291 ~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd--l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~ 368 (462)
++.+.+.++.+++.. +.|+.|-+-.+ +..+++.+.++.+.+.|+|+|+++...
T Consensus 52 ~~~l~~~i~~i~~~~---------~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~---------------- 106 (328)
T 2gjl_A 52 PEALAAEIARCRELT---------DRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND---------------- 106 (328)
T ss_dssp HHHHHHHHHHHHHHC---------SSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC----------------
T ss_pred HHHHHHHHHHHHHhc---------CCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC----------------
Confidence 455666666666542 34555544322 112356788899999999999865321
Q ss_pred CCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 369 GGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 369 GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
| .+.++.+++. +++++. .+.+.+++....++|||.|.+
T Consensus 107 ------p-----~~~~~~l~~~---gi~vi~--~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 107 ------P-----GEHIAEFRRH---GVKVIH--KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp ------C-----HHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred ------c-----HHHHHHHHHc---CCCEEe--eCCCHHHHHHHHHcCCCEEEE
Confidence 1 2556677664 477774 489999999999999999987
No 413
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=90.41 E-value=3.3 Score=41.33 Aligned_cols=96 Identities=22% Similarity=0.187 Sum_probs=52.7
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++.+||.++ |+.+.++|+|||-+...--... .+.. +.-..++|| |=..-....+++|+.+++.++.+
T Consensus 133 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~-N~R~D~yGG-slenR~rf~~eiv~aVr~avg~d 210 (343)
T 3kru_A 133 LSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLS-NKRKDEYGN-SIENRARFLIEVIDEVRKNWPEN 210 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSS-SHHHHTHHHHHHHHHHHHTSCTT
T ss_pred cCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccc-cccchhhcc-chHhHHHHHHHHHHHHHhcCCcc
Confidence 555555444 4456789999998863210000 0000 011224565 21111124578999999999877
Q ss_pred ccEEE--e------cCCCCHHHHHHHH----HhCCCEEEEchh
Q 012517 395 IPLIG--C------GGISSGEDAYRKI----RAGATLVQLYTA 425 (462)
Q Consensus 395 ipIIg--~------GGI~s~~dA~e~i----~aGAd~Vqv~Ta 425 (462)
+||.. + ||. +.+|+.++. ++ +|++.+..+
T Consensus 211 ~pv~vRls~~~~~~~g~-~~~~~~~~a~~l~~~-vd~i~vs~g 251 (343)
T 3kru_A 211 KPIFVRVSADDYMEGGI-NIDMMVEYINMIKDK-VDLIDVSSG 251 (343)
T ss_dssp SCEEEEEECCCSSTTSC-CHHHHHHHHHHHTTT-CSEEEEECC
T ss_pred CCeEEEeechhhhccCc-cHHHHHHHHHHhhcc-ccEEeccCC
Confidence 78754 1 343 456655544 25 899998544
No 414
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=90.33 E-value=1.3 Score=42.85 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=79.4
Q ss_pred cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEE
Q 012517 267 SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGL 346 (462)
Q Consensus 267 ~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgI 346 (462)
.+++|++.|- -+.+++.+ +++++. +.++||++|-..+.+.+++...++.+...|-.-+
T Consensus 92 ~~~vd~~~Ig--------A~~~rn~~----ll~~~a----------~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i 149 (267)
T 2nwr_A 92 AEVADIIQIP--------AFLCRQTD----LLLAAA----------KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEI 149 (267)
T ss_dssp HTTCSEEEEC--------GGGTTCHH----HHHHHH----------TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSE
T ss_pred HhcCCEEEEC--------cccccCHH----HHHHHH----------cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 3458998873 23333333 555552 2478999999988888899999999999997655
Q ss_pred EEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE-----------ecCCCCH------HHH
Q 012517 347 IISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG-----------CGGISSG------EDA 409 (462)
Q Consensus 347 ivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg-----------~GGI~s~------~dA 409 (462)
++.-..... +.+.....++.+..+++. . |||. .++-+.+ .-+
T Consensus 150 ~L~~rG~~~-----------------~y~~~~~dl~~i~~lk~~---~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia 208 (267)
T 2nwr_A 150 YLTERGTTF-----------------GYNNLVVDFRSLPIMKQW---A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLI 208 (267)
T ss_dssp EEEECCEEC-----------------SSSCEECCTTHHHHHTTT---S-EEEEETTGGGCCTTC------CCGGGHHHHH
T ss_pred EEEECCCCC-----------------CCCccccCHHHHHHHHHc---C-CEEEcCCcccccCCCcCcCCCCchhHHHHHH
Confidence 555332110 111111244566667664 3 7766 2333333 446
Q ss_pred HHHHHhCCCEEEEchhhh-----hc-----CCChHHHHHHHHHHH
Q 012517 410 YRKIRAGATLVQLYTAFA-----YG-----GPALIPQIKAELAEC 444 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali-----~~-----GP~~i~~i~~~L~~~ 444 (462)
...+.+||+.++|=+-+. -. .|+-++++.+++++.
T Consensus 209 ~aava~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~l~~l~~~i~~~ 253 (267)
T 2nwr_A 209 RAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAILEI 253 (267)
T ss_dssp HHHHHHCCSEEEEEEESCGGGCSSCTTTCEEGGGHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEecCCcccCCCccccCCCHHHHHHHHHHHHHH
Confidence 677789999888755431 12 255677777766643
No 415
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.30 E-value=3.6 Score=40.75 Aligned_cols=159 Identities=11% Similarity=0.060 Sum_probs=87.4
Q ss_pred HHHHHHcccCcEEEEecc-CC-CCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHHHHHHH
Q 012517 261 QGVHTLSQYADYLVINVS-SP-NTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLEDIAAV 337 (462)
Q Consensus 261 ~~~~~l~~~aD~leiNvS-sP-nt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~~ia~~ 337 (462)
..+++++ +|.|-+-=+ .- ..-|..|. ..-.+.+++..++..++.. .+.||++-+.-.+ +.+++.+.++.
T Consensus 53 ~i~e~aG--fdai~vs~~~~a~~~lG~pD~-~~vt~~em~~~~~~I~r~~-----~~~PviaD~d~Gyg~~~~v~~tv~~ 124 (318)
T 1zlp_A 53 AVVEKTG--FHAAFVSGYSVSAAMLGLPDF-GLLTTTEVVEATRRITAAA-----PNLCVVVDGDTGGGGPLNVQRFIRE 124 (318)
T ss_dssp HHHHHTT--CSEEEECHHHHHHHHHCCCSS-SCSCHHHHHHHHHHHHHHS-----SSSEEEEECTTCSSSHHHHHHHHHH
T ss_pred HHHHHcC--CCEEEECcHHHhhHhcCCCCC-CCCCHHHHHHHHHHHHhhc-----cCCCEEEeCCCCCCCHHHHHHHHHH
Confidence 3444444 888876311 11 11233331 1123455555555554322 2789999997654 34577888888
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchH--HHHHHHHHhc-CCCccEEEecCCC-------CHH
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSN--NILKEMYLLT-RGKIPLIGCGGIS-------SGE 407 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al--~~v~~i~~~~-~~~ipIIg~GGI~-------s~~ 407 (462)
+.++|++||.+=.... ....|-+.|+.+.|... +.|+.+++.. .+++-|++=.--. .-+
T Consensus 125 l~~aGaagv~iED~~~-----------~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~ 193 (318)
T 1zlp_A 125 LISAGAKGVFLEDQVW-----------PKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIR 193 (318)
T ss_dssp HHHTTCCEEEEECBCS-----------SCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHH
T ss_pred HHHcCCcEEEECCCCC-----------CccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHH
Confidence 9999999998764431 01234556777877653 2344444443 1244455432221 123
Q ss_pred HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 408 dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
+|..+.++|||+|.+=. + ..+..++++.+++
T Consensus 194 Ra~Ay~eAGAd~i~~e~-~--~~~e~~~~i~~~l 224 (318)
T 1zlp_A 194 RANLYKEAGADATFVEA-P--ANVDELKEVSAKT 224 (318)
T ss_dssp HHHHHHHTTCSEEEECC-C--CSHHHHHHHHHHS
T ss_pred HHHHHHHcCCCEEEEcC-C--CCHHHHHHHHHhc
Confidence 55667789999998753 1 1234555555544
No 416
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.19 E-value=1.7 Score=42.99 Aligned_cols=91 Identities=18% Similarity=0.176 Sum_probs=62.7
Q ss_pred CchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccC
Q 012517 290 GRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETG 369 (462)
Q Consensus 290 ~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~G 369 (462)
+++.+.+.++.+++. .+.|+.|.+-.. ..+..+.++.+.+.|+|.|+++...
T Consensus 61 ~~~~l~~~i~~i~~~---------~~~p~gVnl~~~--~~~~~~~~~~~~~~g~d~V~l~~g~----------------- 112 (326)
T 3bo9_A 61 KPDDLRKAISELRQK---------TDKPFGVNIILV--SPWADDLVKVCIEEKVPVVTFGAGN----------------- 112 (326)
T ss_dssp CHHHHHHHHHHHHTT---------CSSCEEEEEETT--STTHHHHHHHHHHTTCSEEEEESSC-----------------
T ss_pred CHHHHHHHHHHHHHh---------cCCCEEEEEecc--CCCHHHHHHHHHHCCCCEEEECCCC-----------------
Confidence 345566666666532 257888887541 1246778888999999999864321
Q ss_pred CCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 370 GLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 370 GlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
| .+.++.+++. .++|+. +|.+.++|....++|||.|.+-
T Consensus 113 -----p-----~~~~~~l~~~---g~~v~~--~v~s~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 113 -----P-----TKYIRELKEN---GTKVIP--VVASDSLARMVERAGADAVIAE 151 (326)
T ss_dssp -----C-----HHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSCEEEE
T ss_pred -----c-----HHHHHHHHHc---CCcEEE--EcCCHHHHHHHHHcCCCEEEEE
Confidence 1 2455666653 467764 6899999999999999999883
No 417
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.01 E-value=22 Score=37.69 Aligned_cols=130 Identities=15% Similarity=0.156 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEec----CCCChh
Q 012517 254 DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIA----PDLSKE 329 (462)
Q Consensus 254 ~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKis----pdl~~~ 329 (462)
+..+.+++.+...+ .|.+.|-.++ | +.+.+.+.++.+++. ...+-+=++ +-.+.+
T Consensus 117 dv~~~~ve~a~~aG--vd~vrIf~s~-s--------d~~ni~~~i~~ak~~----------G~~v~~~i~~~~~~~~~~e 175 (539)
T 1rqb_A 117 EVVDRFVDKSAENG--MDVFRVFDAM-N--------DPRNMAHAMAAVKKA----------GKHAQGTICYTISPVHTVE 175 (539)
T ss_dssp HHHHHHHHHHHHTT--CCEEEECCTT-C--------CTHHHHHHHHHHHHT----------TCEEEEEEECCCSTTCCHH
T ss_pred cccHHHHHHHHhCC--CCEEEEEEeh-h--------HHHHHHHHHHHHHHC----------CCeEEEEEEeeeCCCCCHH
Confidence 33556666666555 7887765443 1 113344555544432 233433343 224567
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe----cCCCC
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC----GGISS 405 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~----GGI~s 405 (462)
.+.++++.+.+.|+|-|.+..|. |.+. .....++++.+++.++.++||-.= -|..
T Consensus 176 ~~~~~a~~l~~~Gad~I~L~DT~----------------G~~~----P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlA- 234 (539)
T 1rqb_A 176 GYVKLAGQLLDMGADSIALKDMA----------------ALLK----PQPAYDIIKAIKDTYGQKTQINLHCHSTTGVT- 234 (539)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETT----------------CCCC----HHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCH-
T ss_pred HHHHHHHHHHHcCCCEEEeCCCC----------------CCcC----HHHHHHHHHHHHHhcCCCceEEEEeCCCCChH-
Confidence 88999999999999999888764 1111 123567888888888534665433 2332
Q ss_pred HHHHHHHHHhCCCEEEEchh
Q 012517 406 GEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 406 ~~dA~e~i~aGAd~Vqv~Ta 425 (462)
-.-++..+++||+.|+..-.
T Consensus 235 vAN~laAveAGa~~VD~ti~ 254 (539)
T 1rqb_A 235 EVSLMKAIEAGVDVVDTAIS 254 (539)
T ss_dssp HHHHHHHHHTTCSEEEEBCG
T ss_pred HHHHHHHHHhCCCEEEEecc
Confidence 34677888999999987643
No 418
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.77 E-value=1.5 Score=42.99 Aligned_cols=86 Identities=19% Similarity=0.080 Sum_probs=58.2
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|+|.++=++ |.-.....+.-.++++.+.+.. ..++||++=+..+ +-++..++++
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~-------~grvpviaGvg~~-~t~~ai~la~ 93 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPLGST----GEFAYLGTAQREAVVRATIEAA-------QRRVPVVAGVAST-SVADAVAQAK 93 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTTSGG----GTGGGCCHHHHHHHHHHHHHHH-------TTSSCBEEEEEES-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cCccccCHHHHHHHHHHHHHHh-------CCCCcEEEeCCCC-CHHHHHHHHH
Confidence 4555555553 358998876432 3322334455567777777765 2478999988754 3357889999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 94 ~a~~~Gadavlv~~P~y~~ 112 (300)
T 3eb2_A 94 LYEKLGADGILAILEAYFP 112 (300)
T ss_dssp HHHHHTCSEEEEEECCSSC
T ss_pred HHHHcCCCEEEEcCCCCCC
Confidence 9999999999988665443
No 419
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=89.75 E-value=0.68 Score=44.98 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=60.7
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.|+++-++| .++++.+.+.|+++|.+.... + . .....||.. .....+.++++++.+ +
T Consensus 21 ~~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v---~--~----~~~~~~G~~----~~~~~~~i~~i~~~~--~ 78 (297)
T 2zbt_A 21 KGGVIMDVTT-------PEQAVIAEEAGAVAVMALERV---P--A----DIRAQGGVA----RMSDPKIIKEIMAAV--S 78 (297)
T ss_dssp TTEEEEEESS-------HHHHHHHHHHTCSEEEECSSC---H--H----HHHHTTCCC----CCCCHHHHHHHHTTC--S
T ss_pred hCCeeeeech-------HHHHHHHHHCCCcEEEecccc---c--h----HHHhhcCCc----cCCCHHHHHHHHHhc--C
Confidence 4588888876 578999999999999873110 0 0 000123321 123467889999888 7
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
+|++...++.+.+++..++++|||.|
T Consensus 79 ~Pvi~~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 79 IPVMAKVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp SCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CCeEEEeccCCHHHHHHHHHCCCCEE
Confidence 99999888888999999999999999
No 420
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=89.60 E-value=8.2 Score=39.55 Aligned_cols=120 Identities=16% Similarity=0.035 Sum_probs=79.5
Q ss_pred CcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCCC--CCHHHHHHHHHHHHH
Q 012517 188 GAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKNK--TSEDAAADYVQGVHT 265 (462)
Q Consensus 188 ~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~nk--~t~~~~~dy~~~~~~ 265 (462)
.+++..+.=+.-|++-+.++|... ..|+...+-|.| .+++ +|.+.+.+
T Consensus 115 ~~~~~~f~GP~~Gi~g~R~~lg~~---------------------------~RPl~gtiiKPklGls~~---~~a~~~ye 164 (414)
T 3fk4_A 115 DELKKHFPGPKFGIDGIRNLLQVH---------------------------DRPLLMSIFKGMIGRNIG---YLKTQLRD 164 (414)
T ss_dssp HHHHTTCCCCSSHHHHHHHHHTCC---------------------------SSCEEEEECSSCTTCCHH---HHHHHHHH
T ss_pred HHHHhcCCCCCCcHHHHHHHhCCC---------------------------CCceeEeecccccCCCHH---HHHHHHHH
Confidence 457777766778887776666422 125555565643 4676 88888888
Q ss_pred Hccc-CcEEEE--eccC-CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHc
Q 012517 266 LSQY-ADYLVI--NVSS-PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVAL 341 (462)
Q Consensus 266 l~~~-aD~lei--NvSs-Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~ 341 (462)
+... .|++-= |+.+ |..| -++.+..+.++++++.+++ +..+-..+-|+.+. +++.+-++.+.+.
T Consensus 165 ~~~GGlDfiKDDE~l~~q~f~p------~~eRv~~v~eai~rA~~eT----Ge~k~y~~NiTa~~--~em~~ra~~a~e~ 232 (414)
T 3fk4_A 165 QAIGGVDIVKDDEILFENALTP------LTKRIVSGKEVLQSVYETY----GHKTLYAVNLTGRT--FDLKENAKRAVQA 232 (414)
T ss_dssp HHHTTCSEEECCTTCCSCSSSC------HHHHHHHHHHHHHHHHHHH----CCCCEEEEECCSCG--GGHHHHHHHHHHH
T ss_pred HHhcCCCcCcCCCCCCCCCCcc------HHHHHHHHHHHHHHHHHhh----CCcceEEeEcCCCH--HHHHHHHHHHHHc
Confidence 8764 799853 3332 2221 2255666777777776665 44556677888763 6899999999999
Q ss_pred CCcEEEEe
Q 012517 342 RLDGLIIS 349 (462)
Q Consensus 342 GvdgIivs 349 (462)
|...+.+.
T Consensus 233 G~~~~mvd 240 (414)
T 3fk4_A 233 GADILLFN 240 (414)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEc
Confidence 99887654
No 421
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=89.47 E-value=18 Score=35.97 Aligned_cols=139 Identities=9% Similarity=-0.043 Sum_probs=91.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++....+++ ++.+.++++ ...+..+-+.+.. +.+.-.+.+++|+++. +.+..|.
T Consensus 133 p~~~~~g~~~~~~~---~~~~~a~~~~~~G~~~~KiKvG~----------~~~~d~~~v~avr~a~-------g~~~~l~ 192 (372)
T 3cyj_A 133 PVYGSGGFTSYPLR---RLQEQLGGWAAAGIPRVKMKVGR----------EPEKDPERVRAAREAI-------GESVELM 192 (372)
T ss_dssp EEEEECCCTTSCHH---HHHHHHHHHHHTTCCEEEEECCS----------SGGGHHHHHHHHHHHH-------CTTSEEE
T ss_pred eEEEEcCCCCCCHH---HHHHHHHHHHHcCCCEEEEcCCC----------CHHHHHHHHHHHHHHh-------CCCCeEE
Confidence 45555543212333 444444443 3457888887642 2233356777777765 3467888
Q ss_pred EEecCCCChhhHHHHHHHHHHc-CCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVAL-RLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~-GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
|-....++.++..++++.+.+. ++..|- + |+.+-..+..+++++.++.++||.
T Consensus 193 vDaN~~~~~~~a~~~~~~l~~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~~~~ipIa 246 (372)
T 3cyj_A 193 VDANGAYTRKQALYWAGAFAREAGISYLE---------E-----------------PVSSEDREGLRLLRDRGPGGVAIA 246 (372)
T ss_dssp EECTTCSCHHHHHHHHHHHHHHHCCCEEE---------C-----------------SSCTTCHHHHHHHHHHSCTTCEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhhcCCcEEE---------C-----------------CCCcccHHHHHHHHHhCCCCCCEE
Confidence 8887778888888999999988 776541 1 122234566788888884238999
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 399 GCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 399 g~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
+-=-+.+..|+.+. .-.+|.||+=-.-
T Consensus 247 ~dE~~~~~~~~~~~-~~a~d~i~ik~~~ 273 (372)
T 3cyj_A 247 AGEYEWTLPQLHDL-AGCVDILQADVTR 273 (372)
T ss_dssp ECTTCCSHHHHHHH-HTTCSEEEECTTT
T ss_pred CCCCccCHHHHHHH-hCCCCEEecCchh
Confidence 98889999998887 5568999985443
No 422
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=89.45 E-value=1.7 Score=44.43 Aligned_cols=97 Identities=10% Similarity=-0.035 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCC
Q 012517 295 KDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374 (462)
Q Consensus 295 ~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~ 374 (462)
.+.+++|+++. +.+.+|+|-....++.++..++++.+.+.++..|- .
T Consensus 197 i~~v~avRea~-------G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~iE-------e------------------- 243 (404)
T 3ekg_A 197 LEELATMRERV-------GPDFWLMFDCWMSLDLNYATRLARGAREYGLKWIE-------E------------------- 243 (404)
T ss_dssp HHHHHHHHHHH-------CSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEE-------C-------------------
T ss_pred HHHHHHHHHHh-------CCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcEEe-------c-------------------
Confidence 45566666554 45788999888888888889999999998876552 1
Q ss_pred cCccchHHHHHHHHHhcCCCccE-EEec-CCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPL-IGCG-GISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipI-Ig~G-GI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
|+.+...+..+++++.+ .+|| |+.| -+.+..|..++++.| +|.||+--.-
T Consensus 244 P~~~~d~~~~a~l~~~~--~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~ 296 (404)
T 3ekg_A 244 ALPPDDYWGYAELRRNA--PTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGW 296 (404)
T ss_dssp CSCTTCHHHHHHHHHHS--CTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred CCCcccHHHHHHHHHhc--CCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhh
Confidence 12233567788899988 5664 3333 488999999999988 8999886554
No 423
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=89.44 E-value=6.9 Score=38.48 Aligned_cols=128 Identities=17% Similarity=0.278 Sum_probs=77.5
Q ss_pred CcEEE----EeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEE--ecC--------CCChhhHHHHH
Q 012517 270 ADYLV----INVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVK--IAP--------DLSKEDLEDIA 335 (462)
Q Consensus 270 aD~le----iNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vK--isp--------dl~~~~~~~ia 335 (462)
||++- +|+.+|+.. +.+.++-+.+. ++++ ...|+++= +.| +.+.+-+..-+
T Consensus 142 ADaV~~l~~i~~Gs~~e~--------~~l~~la~vv~-ea~~------~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 142 VDFAKTLVRINLSDAGTA--------PTLEATAHAVN-EAAA------AQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp CCEEEEEEEECTTCTTHH--------HHHHHHHHHHH-HHHH------TTCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred CCEEEEEEEECCCChhHH--------HHHHHHHHHHH-HHHH------cCCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 88855 677777541 23333333333 3332 36898885 322 34555677778
Q ss_pred HHHHHcCCc----EEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCC--CHHHH
Q 012517 336 AVAVALRLD----GLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGIS--SGEDA 409 (462)
Q Consensus 336 ~~~~~~Gvd----gIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~--s~~dA 409 (462)
..+.+.|+| .|-+--+ +..+++-+.+ .+|++..||=. +.++.
T Consensus 207 RiAaELGADs~~tivK~~y~------------------------------e~f~~Vv~a~--~vPVViaGG~k~~~~~e~ 254 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLPVV------------------------------EEMERVMEST--TMPTLLLGGEGGNDPDAT 254 (307)
T ss_dssp HHHHTCSSCCSSEEEEEECC------------------------------TTHHHHGGGC--SSCEEEECCSCC--CHHH
T ss_pred HHHHHhCCCcCCCEEEeCCc------------------------------HHHHHHHHhC--CCCEEEeCCCCCCCHHHH
Confidence 888999999 5543111 1136666777 58988888866 45666
Q ss_pred HHH----HH-hCCCEEEEchhhhhc-CCChHHHHHHHHHHHH
Q 012517 410 YRK----IR-AGATLVQLYTAFAYG-GPALIPQIKAELAECL 445 (462)
Q Consensus 410 ~e~----i~-aGAd~Vqv~Tali~~-GP~~i~~i~~~L~~~l 445 (462)
+++ ++ +||..+-+++.+.+. .++ +..+.+.+....
T Consensus 255 L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~d-p~~~v~al~~iV 295 (307)
T 3fok_A 255 FASWEHALTLPGVRGLTVGRTLLYPQDGD-VAAAVDTAARLV 295 (307)
T ss_dssp HHHHHHHTTSTTEEEEEECTTTSSCSSSC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEeechhhccCCCCC-HHHHHHHHHHHH
Confidence 554 56 699999999999661 233 445555555443
No 424
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=89.32 E-value=2.4 Score=42.95 Aligned_cols=121 Identities=16% Similarity=0.102 Sum_probs=82.5
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++.+.++++. ..+..+-+.+. |. . + .+.+++|+++. .+..|+|-....++.++. ++++
T Consensus 164 ~~~~~a~~~~~~G~~~~KiKvg-~~----~-----d--~~~v~avr~a~--------~~~~l~vDaN~~~~~~~a-~~~~ 222 (393)
T 1wuf_A 164 TLLQLVNQYVDQGYERVKLKIA-PN----K-----D--IQFVEAVRKSF--------PKLSLMADANSAYNREDF-LLLK 222 (393)
T ss_dssp HHHHHHHHHHHHTCCEEEEECB-TT----B-----S--HHHHHHHHTTC--------TTSEEEEECTTCCCGGGH-HHHH
T ss_pred HHHHHHHHHHHHhhHhheeccC-hH----H-----H--HHHHHHHHHHc--------CCCEEEEECCCCCCHHHH-HHHH
Confidence 4555444443 35788888764 21 1 1 24566666542 256677777666777788 8888
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.++..|- + |+.+...+..+++++.+ .+||.+---+.+.+|+.+.++.|
T Consensus 223 ~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 274 (393)
T 1wuf_A 223 ELDQYDLEMIE---------Q-----------------PFGTKDFVDHAWLQKQL--KTRICLDENIRSVKDVEQAHSIG 274 (393)
T ss_dssp TTGGGTCSEEE---------C-----------------CSCSSCSHHHHHHHTTC--SSEEEECTTCCSHHHHHHHHHHT
T ss_pred HHHhCCCeEEE---------C-----------------CCCCcCHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHhC
Confidence 88888777652 1 11222346667888887 79999999999999999999998
Q ss_pred -CCEEEEchhhh
Q 012517 417 -ATLVQLYTAFA 427 (462)
Q Consensus 417 -Ad~Vqv~Tali 427 (462)
+|.||+=-.-+
T Consensus 275 a~d~v~ik~~~~ 286 (393)
T 1wuf_A 275 SCRAINLKLARV 286 (393)
T ss_dssp CCSEEEECTGGG
T ss_pred CCCEEEeChhhh
Confidence 79999976553
No 425
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=89.31 E-value=2.9 Score=44.10 Aligned_cols=105 Identities=19% Similarity=0.206 Sum_probs=68.1
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEe-cCCc-c-CCCC------CCCCCcc-------cccCCCC----CC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIIS-NTTI-S-RPDP------VSKNPVA-------KETGGLS----GK 374 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivs-NTt~-~-r~~~------~~~~~~~-------~~~GGlS----G~ 374 (462)
..|.++.|-..-+.+.+.++++.+++.|+++|+++ |+.. + |... .+..... ...+|++ ..
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 46899999644455678899999999999998776 3321 1 1100 0000000 0111211 00
Q ss_pred cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEE
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv 422 (462)
--...+.+.|+.+++.+ ++||+.- ||.+.+||..+.++|||.|-+
T Consensus 326 ~d~~~~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKT--KLPIVIK-GVQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp BCTTCCHHHHHHHHHHC--SSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred cChHhHHHHHHHHHHHh--CCcEEEE-eCCCHHHHHHHHHcCCCEEEE
Confidence 01124678899999998 6898866 577899999999999999999
No 426
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=89.18 E-value=3.8 Score=40.40 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 257 ADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 257 ~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
+.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.+.. ..++||++=+..+ +-++..+++
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~-------~grvpviaGvg~~-~t~~ai~la 99 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTN----AEAFLLTREERAQLIATARKAV-------GPDFPIMAGVGAH-STRQVLEHI 99 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHHH-------CTTSCEEEECCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccc----cChhhCCHHHHHHHHHHHHHHh-------CCCCcEEEeCCCC-CHHHHHHHH
Confidence 355666666544 59999998543 3322334455567777777765 2479999988754 445788999
Q ss_pred HHHHHcCCcEEEEecCC
Q 012517 336 AVAVALRLDGLIISNTT 352 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt 352 (462)
+.+++.|+|++.+....
T Consensus 100 ~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 100 NDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHHHTCSEEEECCCC
T ss_pred HHHHHcCCCEEEEeCCc
Confidence 99999999999987653
No 427
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=89.11 E-value=5.3 Score=40.36 Aligned_cols=42 Identities=33% Similarity=0.224 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 379 LSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 379 ~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
...+.|+++++.+ ++||+.- ||.+.++|...+++|||.|-+.
T Consensus 212 ~~~~~i~~i~~~~--~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 212 FNWEALRWLRDLW--PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CCHHHHHHHHHHC--CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred ccHHHHHHHHHhc--CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 4678999999998 6898854 6899999999999999999993
No 428
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.04 E-value=3.1 Score=40.33 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=85.5
Q ss_pred HHHHHHcccCcEEEEe-ccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC--hhhHHHHHHH
Q 012517 261 QGVHTLSQYADYLVIN-VSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS--KEDLEDIAAV 337 (462)
Q Consensus 261 ~~~~~l~~~aD~leiN-vSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~--~~~~~~ia~~ 337 (462)
..+++++ +|.|-+- .|.-+.-|..+. ..-.+.+++..++..++. .+.||++-+.-.+. .++..+.++.
T Consensus 30 ~~~~~aG--~~ai~vsg~s~a~~~G~pD~-~~vt~~em~~~~~~I~~~------~~~pviaD~d~Gyg~~~~~~~~~v~~ 100 (275)
T 2ze3_A 30 RLLEAAG--FTAIGTTSAGIAHARGRTDG-QTLTRDEMGREVEAIVRA------VAIPVNADIEAGYGHAPEDVRRTVEH 100 (275)
T ss_dssp HHHHHHT--CSCEEECHHHHHHHSCCCSS-SSSCHHHHHHHHHHHHHH------CSSCEEEECTTCSSSSHHHHHHHHHH
T ss_pred HHHHHcC--CCEEEECcHHHHHhCCCCCC-CCCCHHHHHHHHHHHHhh------cCCCEEeecCCCCCCCHHHHHHHHHH
Confidence 3444544 8887775 111122344442 122345555555555432 36899999987653 4578888899
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC----CccEEEecCCCC--------
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG----KIPLIGCGGISS-------- 405 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~----~ipIIg~GGI~s-------- 405 (462)
+.++|++||.+=.... ..|+.+.+.. +.+.+|+..+.. .+|+...|-...
T Consensus 101 l~~aGaagv~iED~~~-----------------~~~k~l~~~~-e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~ 162 (275)
T 2ze3_A 101 FAALGVAGVNLEDATG-----------------LTPTELYDLD-SQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGAT 162 (275)
T ss_dssp HHHTTCSEEEEECBCS-----------------SSSSCBCCHH-HHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSS
T ss_pred HHHcCCcEEEECCCcC-----------------CCCCccCCHH-HHHHHHHHHHHhHhhcCCCeEEEEechhhhcccccc
Confidence 9999999998754321 1234444442 333444333221 366666666544
Q ss_pred ----HHH----HHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 406 ----GED----AYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 406 ----~~d----A~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
.++ +..+.++|||+|.+=. + ..+..++++.+++
T Consensus 163 ~~~~~~~ai~Ra~ay~eAGAd~i~~e~-~--~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 163 DEERLAETVRRGQAYADAGADGIFVPL-A--LQSQDIRALADAL 203 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTT-C--CCHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHHHCCCCEEEECC-C--CCHHHHHHHHHhc
Confidence 244 4455578999997754 1 2335666666655
No 429
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=89.03 E-value=2.9 Score=41.28 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=62.8
Q ss_pred chHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCC
Q 012517 291 RKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGG 370 (462)
Q Consensus 291 ~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GG 370 (462)
.+.+.+.++.+++. .+.|+.|-+-.. ..++.+.++.+.+.|+|+|.++...
T Consensus 48 ~~~~~~~i~~i~~~---------~~~p~gvnl~~~--~~~~~~~~~~a~~~g~d~V~~~~g~------------------ 98 (332)
T 2z6i_A 48 KEVVKANIDKIKSL---------TDKPFGVNIMLL--SPFVEDIVDLVIEEGVKVVTTGAGN------------------ 98 (332)
T ss_dssp HHHHHHHHHHHHHH---------CCSCEEEEECTT--STTHHHHHHHHHHTTCSEEEECSSC------------------
T ss_pred HHHHHHHHHHHHHh---------cCCCEEEEecCC--CCCHHHHHHHHHHCCCCEEEECCCC------------------
Confidence 35566666666653 257888887541 1246778889999999999865321
Q ss_pred CCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 371 LSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 371 lSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
| .++++.+++. ++||+.. |.+.+++....++|+|.|-+-
T Consensus 99 ----p-----~~~i~~l~~~---g~~v~~~--v~~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 99 ----P-----SKYMERFHEA---GIIVIPV--VPSVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp ----G-----GGTHHHHHHT---TCEEEEE--ESSHHHHHHHHHTTCSCEEEE
T ss_pred ----h-----HHHHHHHHHc---CCeEEEE--eCCHHHHHHHHHcCCCEEEEE
Confidence 1 1345666653 4787753 789999999999999999883
No 430
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=88.95 E-value=4 Score=40.09 Aligned_cols=86 Identities=10% Similarity=0.087 Sum_probs=59.0
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|.|.++=++ |.-.....+.-.++++.+.+.. ..++||++=+..+ +-++..++++
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~-------~grvpViaGvg~~-~t~~ai~la~ 96 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTT----AESPTLTHDEELELFAAVQKVV-------NGRVPLIAGVGTN-DTRDSIEFVK 96 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTT----TTGGGSCHHHHHHHHHHHHHHS-------CSSSCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHh-------CCCCcEEEeCCCc-CHHHHHHHHH
Confidence 4455555553 359999998653 3333334455667777777664 2478999988764 3457889999
Q ss_pred HHHHcCC-cEEEEecCCccC
Q 012517 337 VAVALRL-DGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~Gv-dgIivsNTt~~r 355 (462)
.+.+.|+ |++.+....+.+
T Consensus 97 ~A~~~Ga~davlv~~P~y~~ 116 (311)
T 3h5d_A 97 EVAEFGGFAAGLAIVPYYNK 116 (311)
T ss_dssp HHHHSCCCSEEEEECCCSSC
T ss_pred HHHhcCCCcEEEEcCCCCCC
Confidence 9999996 999988655443
No 431
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.95 E-value=1.8 Score=41.96 Aligned_cols=119 Identities=13% Similarity=0.122 Sum_probs=73.0
Q ss_pred CCCEEEEec-CCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc------cccCCCCCCcCccchHHHHHHH
Q 012517 315 PPPLLVKIA-PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA------KETGGLSGKPLLSLSNNILKEM 387 (462)
Q Consensus 315 ~~Pv~vKis-pdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~------~~~GGlSG~~l~~~al~~v~~i 387 (462)
++.++.=+. .|-+.+...++++.+.+.|+|.|-+..... |++...+.- ....|.+ ....++.++++
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfS---DP~aDGpvIq~a~~rAL~~G~~----~~~~~~~v~~~ 91 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFS---DPLADGPTIQGANLRALAAKTT----PDICFELIAQI 91 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCC---CGGGCCSHHHHHHHHHHHTTCC----HHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC---CCCCCCHHHHHHHHHHHHcCCC----HHHHHHHHHHH
Confidence 445555565 344456889999999999999999986652 222111110 0112321 12456888999
Q ss_pred HHh-cCCCccEEEecCCCC-------HHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcCCC
Q 012517 388 YLL-TRGKIPLIGCGGISS-------GEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDGFK 451 (462)
Q Consensus 388 ~~~-~~~~ipIIg~GGI~s-------~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G~~ 451 (462)
|+. . ++||+.-| -.+ .+-+.++.++|+|.|-+- +++-+=.+++.+.++++|..
T Consensus 92 r~~~~--~~Pivlm~-Y~n~v~~~g~~~f~~~~~~aGvdGvIip--------Dlp~ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 92 RARNP--ETPIGLLM-YANLVYARGIDDFYQRCQKAGVDSVLIA--------DVPTNESQPFVAAAEKFGIQ 152 (271)
T ss_dssp HHHCT--TSCEEEEE-CHHHHHHTCHHHHHHHHHHHTCCEEEET--------TSCGGGCHHHHHHHHHTTCE
T ss_pred HhcCC--CCCEEEEe-cCcHHHHHhHHHHHHHHHHCCCCEEEEC--------CCCHHHHHHHHHHHHHcCCe
Confidence 987 5 79998875 111 234667778999998773 33333345566667777754
No 432
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=88.69 E-value=18 Score=35.67 Aligned_cols=147 Identities=14% Similarity=0.033 Sum_probs=83.1
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcc-cCcEEEEecc-CCCCCCcc---cccCchHHHHHHHHHHHHHHhhccCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQ-YADYLVINVS-SPNTPGLR---MLQGRKQLKDLVKKVQAARDEMQWGEEG 314 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~-~aD~leiNvS-sPnt~glr---~lq~~~~l~~ll~aV~~~~~~~~~~~~~ 314 (462)
||.+.+-- .. +++. ..+.++++.+ .++++.|-=. .|..+|+. .+...+...+-+++++++++
T Consensus 103 PviaD~d~Gyg-~~~~---v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~-------- 170 (318)
T 1zlp_A 103 CVVVDGDTGGG-GPLN---VQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIG-------- 170 (318)
T ss_dssp EEEEECTTCSS-SHHH---HHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHT--------
T ss_pred CEEEeCCCCCC-CHHH---HHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcc--------
Confidence 67777721 12 4553 3334444433 3777766321 13333332 24333444445555555542
Q ss_pred CCCEEEEecCCCCh----hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh
Q 012517 315 PPPLLVKIAPDLSK----EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL 390 (462)
Q Consensus 315 ~~Pv~vKispdl~~----~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~ 390 (462)
..+++|--..|... ++..+=+++..++|+|+|.+-.. .+.+.++++.+.
T Consensus 171 ~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~---------------------------~~~e~~~~i~~~ 223 (318)
T 1zlp_A 171 DSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAP---------------------------ANVDELKEVSAK 223 (318)
T ss_dssp TSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC---------------------------CSHHHHHHHHHH
T ss_pred cCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC---------------------------CCHHHHHHHHHh
Confidence 23344433334222 46667778889999999986421 145778899999
Q ss_pred cCCCccEEE---ecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 391 TRGKIPLIG---CGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 391 ~~~~ipIIg---~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+ ++|+.+ .+|-...-+..++-+.|...|-+..+++.
T Consensus 224 l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~r 262 (318)
T 1zlp_A 224 T--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVY 262 (318)
T ss_dssp S--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHH
T ss_pred c--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 8 689853 34432223366777899999988877753
No 433
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=88.61 E-value=0.81 Score=43.97 Aligned_cols=92 Identities=15% Similarity=0.055 Sum_probs=57.6
Q ss_pred cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc------cccCCCCCCcCccchHHHHHHHHHh-cCCCc
Q 012517 323 APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA------KETGGLSGKPLLSLSNNILKEMYLL-TRGKI 395 (462)
Q Consensus 323 spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~------~~~GGlSG~~l~~~al~~v~~i~~~-~~~~i 395 (462)
+.|.+.++..++++.+.+.|+|+|.+.....+ | +...+.. ...+|.. .....+.++++++. + ++
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sd-p--~~DG~~i~~a~~~al~~G~~----~~~~~~~v~~ir~~~~--~~ 95 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSD-P--LADGPTIQNANLRAFAAGVT----PAQCFEMLAIIREKHP--TI 95 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSC-C--TTCCHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHCS--SS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC-c--cCCCHHHHHHHHHHHHcCCC----HHHHHHHHHHHHhcCC--CC
Confidence 44555678899999999999999999654421 1 1110100 0122321 12345789999998 6 68
Q ss_pred cEEEecCC---CC---HHHHHHHHHhCCCEEEEc
Q 012517 396 PLIGCGGI---SS---GEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 396 pIIg~GGI---~s---~~dA~e~i~aGAd~Vqv~ 423 (462)
||+..+-. .. .+.+.++.++|||.+-+.
T Consensus 96 Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 96 PIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp CEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET
T ss_pred CEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc
Confidence 98775311 11 466777888999977764
No 434
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.52 E-value=4.5 Score=39.32 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=59.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.++. ..++||++=+..+ +-++..++++
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~-------~gr~pviaGvg~~-~t~~ai~la~ 92 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTT----GEGCSVGSRERQAILSSFIAAG-------IAPSRIVTGVLVD-SIEDAADQSA 92 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHTT-------CCGGGEEEEECCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHh-------CCCCcEEEeCCCc-cHHHHHHHHH
Confidence 45555555543 59999988653 3333334455667777777653 2468999999865 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 93 ~A~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 93 EALNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHHHTTCSEEEECCCCSSC
T ss_pred HHHhcCCCEEEEcCCcCCC
Confidence 9999999999988655444
No 435
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.47 E-value=3.6 Score=40.34 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=57.9
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|.|.++=++ |.-.....+.-.++++.+.+.. ..++||++=+..+ +-++..++++
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~-------~gr~pviaGvg~~-~t~~ai~la~ 103 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSN----GEFPFLTSSERLEVVSRVRQAM-------PKNRLLLAGSGCE-STQATVEMTV 103 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHTS-------CTTSEEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHc-------CCCCcEEEecCCC-CHHHHHHHHH
Confidence 55566665554 59999998653 3222334455567777776653 2478999988754 3457789999
Q ss_pred HHHHcCCcEEEEecCCc
Q 012517 337 VAVALRLDGLIISNTTI 353 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~ 353 (462)
.+.+.|+|++.+....+
T Consensus 104 ~A~~~Gadavlv~~P~y 120 (307)
T 3s5o_A 104 SMAQVGADAAMVVTPCY 120 (307)
T ss_dssp HHHHTTCSEEEEECCCT
T ss_pred HHHHcCCCEEEEcCCCc
Confidence 99999999999875543
No 436
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=88.42 E-value=4.6 Score=36.96 Aligned_cols=100 Identities=21% Similarity=0.238 Sum_probs=58.5
Q ss_pred cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEE
Q 012517 269 YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLII 348 (462)
Q Consensus 269 ~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIiv 348 (462)
.+|+|++-...... +.+ ..+.++++.+++.++.. +.||++- ++ ++.+.+.|+|+|++
T Consensus 44 G~~~i~l~~~~~~~---~~~---~~~~~~~~~l~~~~~~~------~v~v~v~-------~~----~~~a~~~gad~v~l 100 (227)
T 2tps_A 44 GATLYQFREKGGDA---LTG---EARIKFAEKAQAACREA------GVPFIVN-------DD----VELALNLKADGIHI 100 (227)
T ss_dssp TCSEEEECCCSTTC---CCH---HHHHHHHHHHHHHHHHH------TCCEEEE-------SC----HHHHHHHTCSEEEE
T ss_pred CCCEEEEecCCCCH---hHH---HHHHHHHHHHHHHHHHc------CCeEEEc-------CH----HHHHHHcCCCEEEE
Confidence 49999987533211 111 00255555555544322 5788883 12 34677889999987
Q ss_pred ecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 349 SNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 349 sNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
.... .. +.++++..+ . .++++ .+.|.+++.+....|+|.|.++
T Consensus 101 ~~~~--------------------------~~---~~~~~~~~g-~-~~~~~-s~~t~~e~~~a~~~g~d~v~~~ 143 (227)
T 2tps_A 101 GQED--------------------------AN---AKEVRAAIG-D-MILGV-SAHTMSEVKQAEEDGADYVGLG 143 (227)
T ss_dssp CTTS--------------------------SC---HHHHHHHHT-T-SEEEE-EECSHHHHHHHHHHTCSEEEEC
T ss_pred CCCc--------------------------cC---HHHHHHhcC-C-cEEEE-ecCCHHHHHHHHhCCCCEEEEC
Confidence 3211 01 234445443 2 34443 2578999999889999999974
No 437
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.31 E-value=5.4 Score=39.29 Aligned_cols=130 Identities=19% Similarity=0.203 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC-hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS-KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS 372 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~-~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS 372 (462)
+.+++..++..++.. ..+.||++-+.-... .+++.+.++.+.++|++||.+=..+. ....|-+.
T Consensus 71 ~~em~~~~~~i~r~~----~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~-----------~k~cgh~~ 135 (307)
T 3lye_A 71 LHDMRDNADMIANLD----PFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQIL-----------TKRCGHLS 135 (307)
T ss_dssp HHHHHHHHHHHHTSS----TTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCC-----------CC------
T ss_pred HHHHHHHHHhhhccC----CCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCC-----------CcccCCCC
Confidence 456666665554211 124899999976543 34677888889999999998754331 01234456
Q ss_pred CCcCccchHHHHHHHHH---h---cCCCccEEEecCCC---CHHHHH----HHHHhCCCEEEEchhhhhcCCChHHHHHH
Q 012517 373 GKPLLSLSNNILKEMYL---L---TRGKIPLIGCGGIS---SGEDAY----RKIRAGATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 373 G~~l~~~al~~v~~i~~---~---~~~~ipIIg~GGI~---s~~dA~----e~i~aGAd~Vqv~Tali~~GP~~i~~i~~ 439 (462)
|+++.+.. +.+.+|+. . .+.++-|++=--.. ..++|+ .+.++|||+|.+- ++ ..++.++++.+
T Consensus 136 gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~-~~--~~~~~~~~i~~ 211 (307)
T 3lye_A 136 GKKVVSRD-EYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE-GF--RSKEQAAAAVA 211 (307)
T ss_dssp --CBCCHH-HHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC-CC--SCHHHHHHHHH
T ss_pred CCeecCHH-HHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec-CC--CCHHHHHHHHH
Confidence 77777764 33344422 2 23345455432221 123444 4567999999775 32 24556777776
Q ss_pred HHH
Q 012517 440 ELA 442 (462)
Q Consensus 440 ~L~ 442 (462)
.+.
T Consensus 212 ~~~ 214 (307)
T 3lye_A 212 ALA 214 (307)
T ss_dssp HHT
T ss_pred Hcc
Confidence 653
No 438
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=88.27 E-value=1.7 Score=39.76 Aligned_cols=79 Identities=14% Similarity=0.081 Sum_probs=57.2
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEe--cCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIIS--NTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGI 403 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivs--NTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI 403 (462)
.+..++.+.++.+.+.|+|.+.+- ..+.. +......+.++++++.+ ++|+..-+.|
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~--------------------~~~~~g~~~i~~i~~~~--~~~~~v~l~v 70 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFV--------------------PNISFGADVVASMRKHS--KLVFDCHLMV 70 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSS--------------------SCBCBCHHHHHHHHTTC--CSEEEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCC--------------------CccccCHHHHHHHHHhC--CCCEEEEEee
Confidence 344678889999999999986543 11100 01122368889999988 6889888999
Q ss_pred CCHH-HHHHHHHhCCCEEEEchhh
Q 012517 404 SSGE-DAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 404 ~s~~-dA~e~i~aGAd~Vqv~Tal 426 (462)
.+.+ .+..+.++|||.|++...-
T Consensus 71 ~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 71 VDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp SSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred cCHHHHHHHHHHcCCCEEEEccCc
Confidence 9886 4667778999999998764
No 439
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=88.24 E-value=1.7 Score=43.75 Aligned_cols=112 Identities=19% Similarity=0.192 Sum_probs=61.0
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCCCC-CC--CCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRPDP-VS--KNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~~~-~~--~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
++.+||.++ |+.+.++|.|||-+.-.--...+. +. .+.-..++|| |=..-....+++++.+++.++.+
T Consensus 151 mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~- 228 (361)
T 3gka_A 151 LELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAA- 228 (361)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCC-
Confidence 555555443 445678999999886431000000 00 0011225666 31111224678999999998755
Q ss_pred cEEE--e-----cCCC---CHHHHH---HHH-HhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 396 PLIG--C-----GGIS---SGEDAY---RKI-RAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 396 pIIg--~-----GGI~---s~~dA~---e~i-~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
||.. + +|+. +.+++. +.+ ++|+|.+.+..+. .|+.++.++++.+
T Consensus 229 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~ 286 (361)
T 3gka_A 229 RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF--GGDAIGQQLKAAF 286 (361)
T ss_dssp GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--STTCCHHHHHHHH
T ss_pred eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC--CCHHHHHHHHHHc
Confidence 6543 1 2332 123333 333 4799999998765 3667777777654
No 440
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=88.17 E-value=1.1 Score=42.06 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=62.0
Q ss_pred CCEEEEec-CCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc-----ccccCCCCCCcCccchHHHHHHHHH
Q 012517 316 PPLLVKIA-PDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV-----AKETGGLSGKPLLSLSNNILKEMYL 389 (462)
Q Consensus 316 ~Pv~vKis-pdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~-----~~~~GGlSG~~l~~~al~~v~~i~~ 389 (462)
++++.=+. .|.+.++..+.++.+.+. +|.|.+. +-++-+. ...+.. ....+|. ......+.++++++
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~-~p~sdp~-~DG~~~~~~~~~al~~g~----~~~~~~~~i~~i~~ 77 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELG-IPFSDPI-ADGKTIQESHYRALKNGF----KLREAFWIVKEFRR 77 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEE-CCCSCCT-TSCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHT
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEEC-CCCCCCC-CCCHHHHHHHHHHHHCCC----CHHHHHHHHHHHHh
Confidence 34444442 334446888999999999 9999875 2111111 000000 0000121 12334789999999
Q ss_pred hcCCCccEEEecCCCC------HHHHHHHHHhCCCEEEEchh
Q 012517 390 LTRGKIPLIGCGGISS------GEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 390 ~~~~~ipIIg~GGI~s------~~dA~e~i~aGAd~Vqv~Ta 425 (462)
.+ ++||+..+++.. .+++..++++|||.|-+..-
T Consensus 78 ~~--~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~ 117 (248)
T 1geq_A 78 HS--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDL 117 (248)
T ss_dssp TC--CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTC
T ss_pred hC--CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCC
Confidence 87 689887666554 57888899999999999853
No 441
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=88.09 E-value=6.8 Score=39.45 Aligned_cols=159 Identities=17% Similarity=0.191 Sum_probs=91.3
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+. ..+|+|.++=|+ |.-.....+.-.++++.+.+.. ..++||++=+... +-++..++++
T Consensus 81 al~~lv~~li~~Gv~Gl~v~GTT----GE~~~Ls~eEr~~vi~~~ve~~-------~grvpViaGvg~~-st~eai~la~ 148 (360)
T 4dpp_A 81 AYDDLVNIQIQNGAEGVIVGGTT----GEGQLMSWDEHIMLIGHTVNCF-------GGSIKVIGNTGSN-STREAIHATE 148 (360)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHH-------TTTSEEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccc----cChhhCCHHHHHHHHHHHHHHh-------CCCCeEEEecCCC-CHHHHHHHHH
Confidence 5555555553 359999997543 3333334455567777777665 2478999988754 4457889999
Q ss_pred HHHHcCCcEEEEecCCccCCCC---------CC-CCCc-ccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe---cC
Q 012517 337 VAVALRLDGLIISNTTISRPDP---------VS-KNPV-AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC---GG 402 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~---------~~-~~~~-~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~---GG 402 (462)
.+++.|+|++.+....+.++.. +. ..|. .-..=+.+|. ..+.+.+.++.+ .+ + |+|+ .|
T Consensus 149 ~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNiP~rTg~---~ls~e~l~~La~-~p-n--IvGIKdssg 221 (360)
T 4dpp_A 149 QGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQ---DIPPRAIFKLSQ-NP-N--LAGVKECVG 221 (360)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEECHHHHSC---CCCHHHHHHHTT-ST-T--EEEEEECSC
T ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCCcccCC---CCCHHHHHHHhc-CC-C--EEEEEeCCC
Confidence 9999999999988654433310 00 0010 0000011232 234567777764 32 2 4442 22
Q ss_pred -------------CCCHHH--HHH-HHHhCCCEEEEchhhhhcCCChHHHH
Q 012517 403 -------------ISSGED--AYR-KIRAGATLVQLYTAFAYGGPALIPQI 437 (462)
Q Consensus 403 -------------I~s~~d--A~e-~i~aGAd~Vqv~Tali~~GP~~i~~i 437 (462)
|.++.| +.. .+.+||+.+.-.++-++ |..+.++
T Consensus 222 d~~i~~~~~~~f~v~sG~D~~~l~~~l~~Ga~G~Is~~aNv~--P~~~~~l 270 (360)
T 4dpp_A 222 NKRVEEYTENGVVVWSGNDDECHDSRWDYGATGVISVTSNLV--PGLMRKL 270 (360)
T ss_dssp HHHHHHHHHTTCCEEECCGGGHHHHHHHSCCCEEEESGGGTC--HHHHHHH
T ss_pred cHHHHHhhCCCEEEEeCChHHHHHHHHHcCCCEEEccchhhc--HHHHHHH
Confidence 345544 333 46789998887777654 5544444
No 442
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.99 E-value=12 Score=36.56 Aligned_cols=81 Identities=6% Similarity=0.048 Sum_probs=55.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=++ |.-.....+.-.++++.+.+.. .++||++=+..+ +-++..++++
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Lt~~Er~~v~~~~v~~~--------grvpViaGvg~~-~t~~ai~la~ 96 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGIL----GEAPKLDAAEAEAVATRFIKRA--------KSMQVIVGVSAP-GFAAMRRLAR 96 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGG----GTGGGSCHHHHHHHHHHHHHHC--------TTSEEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEeCccC----cChhhCCHHHHHHHHHHHHHHc--------CCCcEEEecCCC-CHHHHHHHHH
Confidence 55555555543 59999987543 3322334455567777776652 368999988754 3457789999
Q ss_pred HHHHcCCcEEEEecC
Q 012517 337 VAVALRLDGLIISNT 351 (462)
Q Consensus 337 ~~~~~GvdgIivsNT 351 (462)
.+++.|+|++.+...
T Consensus 97 ~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 97 LSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHTCSEEEECCC
T ss_pred HHHHcCCCEEEECCC
Confidence 999999999988643
No 443
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.98 E-value=1.8 Score=43.81 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=62.3
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.|++.=|.++.+. .+..+.++..|+|++.++-.... +.. . . .|..-+..-++.|+++++.+ +
T Consensus 144 ~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~q--e~~-~------p---~Gd~~~~~~~~~I~~l~~~~--~ 206 (365)
T 3sr7_A 144 HLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLMQ--ELL-M------P---EGEREFRSWKKHLSDYAKKL--Q 206 (365)
T ss_dssp -CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHHH--HHT-S------S---SSCCCCHHHHHHHHHHHHHC--C
T ss_pred CCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEeccccc--ccc-C------C---CCCCcHHHHHHHHHHHHHhh--C
Confidence 67999888887653 35667777889999987632211 000 0 0 11111222347899999998 6
Q ss_pred ccEEEecCC---CCHHHHHHHHHhCCCEEEEc
Q 012517 395 IPLIGCGGI---SSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 395 ipIIg~GGI---~s~~dA~e~i~aGAd~Vqv~ 423 (462)
+|||.= +| .++++|....++|||.|-+.
T Consensus 207 ~PVivK-~vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 207 LPFILK-EVGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp SCEEEE-ECSSCCCHHHHHHHHHHTCCEEECC
T ss_pred CCEEEE-ECCCCCCHHHHHHHHHcCCCEEEEe
Confidence 898877 47 89999999999999999883
No 444
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=87.87 E-value=2.2 Score=42.78 Aligned_cols=113 Identities=17% Similarity=0.202 Sum_probs=58.0
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCCCC-CC--CCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRPDP-VS--KNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~~~-~~--~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
++.+||.++ |+.+.++|.|||-++..--...+. +. .+.-..++|| |=.--....+++++.+|+.++.+.
T Consensus 142 mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGG-S~eNR~Rf~~Eii~avr~~vg~~~ 220 (358)
T 4a3u_A 142 LRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGG-AVENRIRLLKDVTERVIATIGKER 220 (358)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCC-CHHHHHHHHHHHHHHHHHHcCccc
Confidence 555666544 455789999999887431000000 00 0111236676 211112246788999999987554
Q ss_pred cEEE-------ecCCCC--HHH----HHHHHHhCCCEEEEchhhhh------cCCChHHHHHH
Q 012517 396 PLIG-------CGGISS--GED----AYRKIRAGATLVQLYTAFAY------GGPALIPQIKA 439 (462)
Q Consensus 396 pIIg-------~GGI~s--~~d----A~e~i~aGAd~Vqv~Tali~------~GP~~i~~i~~ 439 (462)
..+= -||... .++ +...-..|.+.+.+..+-+. .-+.+..++++
T Consensus 221 v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~ 283 (358)
T 4a3u_A 221 TAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRK 283 (358)
T ss_dssp EEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHH
T ss_pred eEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHH
Confidence 2110 134332 222 22333578999988765431 11345666654
No 445
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=87.84 E-value=6.8 Score=37.83 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=65.5
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec----
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG---- 401 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G---- 401 (462)
.+.+++.++++.+.+.|+|.|.+.+|. + +. . .....+.++.+++.++ .+||-.=+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~-G----------------~~-~--P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~ 210 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTI-G----------------RG-T--PDTVAAMLDAVLAIAP-AHSLAGHYHDTG 210 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETT-S----------------CC-C--HHHHHHHHHHHHTTSC-GGGEEEEEBCTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCC-C----------------Cc-C--HHHHHHHHHHHHHhCC-CCeEEEEECCCc
Confidence 355788999999999999999998764 1 10 1 1235688889998885 36665544
Q ss_pred CCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHH---HH-HHHHHHHHHHcCCC
Q 012517 402 GISSGEDAYRKIRAGATLVQLYTAFAYGGPALIP---QI-KAELAECLERDGFK 451 (462)
Q Consensus 402 GI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~---~i-~~~L~~~l~~~G~~ 451 (462)
|.. -..+++.+++||+.|...-.=+-+.|.... .+ .+++...|+..|+.
T Consensus 211 Gla-~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~~ 263 (295)
T 1ydn_A 211 GRA-LDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFE 263 (295)
T ss_dssp SCH-HHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTCB
T ss_pred chH-HHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCCC
Confidence 433 356788899999999985211111222211 11 34455556666665
No 446
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=87.69 E-value=2.6 Score=41.15 Aligned_cols=155 Identities=12% Similarity=0.078 Sum_probs=85.1
Q ss_pred HHHHHHcccCcEEEEecc-CCCC-CCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC-ChhhHHHHHHH
Q 012517 261 QGVHTLSQYADYLVINVS-SPNT-PGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL-SKEDLEDIAAV 337 (462)
Q Consensus 261 ~~~~~l~~~aD~leiNvS-sPnt-~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl-~~~~~~~ia~~ 337 (462)
..+++++ +|.|-+-=| .-++ -|..+. ..-.+.+++..++..++ ..+.||++-+.-.+ +.+++.+.+..
T Consensus 35 ~i~e~aG--f~ai~vs~s~~a~~~lG~pD~-~~vt~~em~~~~~~I~r------~~~~PviaD~d~Gyg~~~~~~~~v~~ 105 (287)
T 3b8i_A 35 RIAADLG--FECGILGGSVASLQVLAAPDF-ALITLSEFVEQATRIGR------VARLPVIADADHGYGNALNVMRTVVE 105 (287)
T ss_dssp HHHHHTT--CSCEEECHHHHHHHHHSCCSS-SCSCHHHHHHHHHHHHT------TCSSCEEEECTTCSSSHHHHHHHHHH
T ss_pred HHHHHcC--CCEEEeCcHHHHHHhcCCCCC-CCCCHHHHHHHHHHHHh------cCCCCEEEECCCCCCCHHHHHHHHHH
Confidence 3444444 888776311 0011 132221 12235666666666653 35789999887554 34577888888
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc----CCCccEEEec--CCC----CHH
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT----RGKIPLIGCG--GIS----SGE 407 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~----~~~ipIIg~G--GI~----s~~ 407 (462)
+.++|++||.+=..... ...|-+.|+ +.+.. +.+.+|+..+ .+++-|++=- ... .-+
T Consensus 106 l~~aGa~gv~iED~~~p-----------Krcgh~~gk-l~~~~-e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~ 172 (287)
T 3b8i_A 106 LERAGIAALTIEDTLLP-----------AQFGRKSTD-LICVE-EGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQ 172 (287)
T ss_dssp HHHHTCSEEEEECBCCS-----------CCTTTCTTC-BCCHH-HHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHH
T ss_pred HHHhCCeEEEEcCCCCc-----------cccCCCCCC-ccCHH-HHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHH
Confidence 99999999988654311 123555666 66553 3444444432 2345555522 121 233
Q ss_pred HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHH
Q 012517 408 DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAE 440 (462)
Q Consensus 408 dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~ 440 (462)
+|..+.++|||+|.+=. + ..+..++++.++
T Consensus 173 Ra~ay~eAGAd~i~~e~-~--~~~~~~~~i~~~ 202 (287)
T 3b8i_A 173 RTLAYQEAGADGICLVG-V--RDFAHLEAIAEH 202 (287)
T ss_dssp HHHHHHHTTCSEEEEEC-C--CSHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEecC-C--CCHHHHHHHHHh
Confidence 55567789999998752 2 123445555443
No 447
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.63 E-value=21 Score=34.49 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecC
Q 012517 329 EDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGG 402 (462)
Q Consensus 329 ~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GG 402 (462)
+++.+=+++++++|+|+|++-... .+..+++.+.+ ++|+||.|.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp----------------------------~~~a~~it~~l--~iP~igIGa 204 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVL----------------------------AELAKKVTETV--SCPTIGIGA 204 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----------------------------HHHHHHHHHHC--SSCEEEESS
T ss_pred HHHHHHHHHHHHcCCcEEEEecCC----------------------------HHHHHHHHHhC--CCCEEEECC
Confidence 577788888999999999874210 25678899999 799999874
No 448
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=87.59 E-value=21 Score=34.42 Aligned_cols=148 Identities=15% Similarity=0.150 Sum_probs=86.7
Q ss_pred eEEEEecC--------CCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccC
Q 012517 241 ILGVNIGK--------NKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWG 311 (462)
Q Consensus 241 ~lgvnig~--------nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~ 311 (462)
.|+|||-+ ....| |-++++..+.. .||.|.+++- +..|-.|+.|. ..+++.
T Consensus 33 ~LgVNIDhVAtLRnARg~~~P----Dpv~aA~~ae~aGAdGITvHlR----eDrRHI~d~Dv-----~~L~~~------- 92 (278)
T 3gk0_A 33 DLGVNIDHVATLRNARGTAYP----DPVRAALAAEDAGADAITLHLR----EDRRHIVDADV-----RTLRPR------- 92 (278)
T ss_dssp EEEEECHHHHHHHHHHSSSCS----CHHHHHHHHHHTTCSEEEEECC----TTCSSSCHHHH-----HHHHHH-------
T ss_pred EEEechHhhhhhhccCCCCCC----CHHHHHHHHHHcCCCEEEeccC----CCcccCCHHHH-----HHHHHH-------
Confidence 59999932 01123 33444443333 3999999962 33444555442 223322
Q ss_pred CCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 312 EEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 312 ~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.+.|+=+-++|. .++.+.+++..-+-+++.-- +.+. ....|||.=..-...-...+.++++.-
T Consensus 93 --i~t~lNlEma~t------~emi~ial~~kP~~vtLVPE---kreE------~TTegGlDv~~~~~~L~~~i~~L~~~G 155 (278)
T 3gk0_A 93 --VKTRMNLECAVT------PEMLDIACEIRPHDACLVPE---KRSE------LTTEGGLDVVGHFDAVRAACKQLADAG 155 (278)
T ss_dssp --CSSCEEEEECSS------HHHHHHHHHHCCSEEEECCC---SGGG------BCSSSSBCTTTTHHHHHHHHHHHHHTT
T ss_pred --cCCCEEeecCCC------HHHHHHHHHcCCCEEEECCC---CCCC------cCCCcchhhhccHHHHHHHHHHHHHCC
Confidence 246888888773 35666677777888876522 1111 113467643322334455666666642
Q ss_pred CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhc
Q 012517 392 RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYG 429 (462)
Q Consensus 392 ~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~ 429 (462)
=++-++.- -+.+++....+.||+.|.++|+-...
T Consensus 156 -IrVSLFID---pd~~qI~aA~~~GAd~IELhTG~YA~ 189 (278)
T 3gk0_A 156 -VRVSLFID---PDEAQIRAAHETGAPVIELHTGRYAD 189 (278)
T ss_dssp -CEEEEEEC---SCHHHHHHHHHHTCSEEEECCHHHHT
T ss_pred -CEEEEEeC---CCHHHHHHHHHhCcCEEEEecchhhc
Confidence 13345553 57889999999999999999998543
No 449
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=87.36 E-value=7.6 Score=39.22 Aligned_cols=126 Identities=15% Similarity=0.081 Sum_probs=82.7
Q ss_pred HHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++++.++++ ...+..+-+.+... +.+.-.+.+++|+++. .+..|+|-....++.++..++++
T Consensus 147 ~~~~~a~~~~~~G~~~iKlKvg~~---------~~~~d~~~v~avR~~~--------~~~~L~vDaN~~w~~~~A~~~~~ 209 (389)
T 3s5s_A 147 RAEEAARRAAAMGFRALKVKVGGR---------LAASDPARIEAIHAAA--------PGASLILDGNGGLTAGEALALVA 209 (389)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCGG---------GTTTHHHHHHHHHHHC--------TTCEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEecCC---------ChHHHHHHHHHHHHhC--------CCCeEEEECCCCCCHHHHHHHHH
Confidence 444444443 23588888887431 1122345667777653 24677777777788788888888
Q ss_pred HHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC
Q 012517 337 VAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG 416 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG 416 (462)
.+.+.+. ++... . .|+.+...+..+++++.+ .+||.+-=-+.+..|..+.++.|
T Consensus 210 ~L~~~~~-~i~~i----E-------------------eP~~~~d~~~~~~l~~~~--~iPIa~dEs~~~~~~~~~~i~~~ 263 (389)
T 3s5s_A 210 HARRLGA-DVALL----E-------------------QPVPRDDWDGMKEVTRRA--GVDVAADESAASAEDVLRVAAER 263 (389)
T ss_dssp HHHHTTC-EEEEE----E-------------------CCSCTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHTT
T ss_pred HHhhCCC-CeEEE----E-------------------CCCCcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcC
Confidence 8843222 22111 1 112223467778899888 69999988999999999999987
Q ss_pred -CCEEEEchhh
Q 012517 417 -ATLVQLYTAF 426 (462)
Q Consensus 417 -Ad~Vqv~Tal 426 (462)
+|.||+--+.
T Consensus 264 a~d~v~~k~~~ 274 (389)
T 3s5s_A 264 AATVVNIKLMK 274 (389)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEecCCC
Confidence 8999887655
No 450
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.91 E-value=5.2 Score=39.33 Aligned_cols=128 Identities=15% Similarity=0.168 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCC-hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLS-KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLS 372 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~-~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS 372 (462)
+.+++..++..++. ..+.||++-+.-... .+++.+.++.+.++|++||.+=..+.. ...|-+.
T Consensus 64 ~~em~~~~~~I~~~-----~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~-----------Krcgh~~ 127 (302)
T 3fa4_A 64 LNDMRANAEMISNI-----SPSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQT-----------KRCGHLA 127 (302)
T ss_dssp HHHHHHHHHHHHTT-----STTSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC------------------
T ss_pred HHHHHHHHHHHHhh-----ccCCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCC-----------cccCCCC
Confidence 45666666555421 137899999976543 346778888899999999987543311 1234456
Q ss_pred CCcCccchHHHHHHHHHh------cCCCccEEEecCCC---CHHHHHHH----HHhCCCEEEEchhhhhcCCChHHHHHH
Q 012517 373 GKPLLSLSNNILKEMYLL------TRGKIPLIGCGGIS---SGEDAYRK----IRAGATLVQLYTAFAYGGPALIPQIKA 439 (462)
Q Consensus 373 G~~l~~~al~~v~~i~~~------~~~~ipIIg~GGI~---s~~dA~e~----i~aGAd~Vqv~Tali~~GP~~i~~i~~ 439 (462)
|+++.+.. +.+.+|+.. .+.++-|++=--.. ..++|++. .++|||.|.+-. + ..+.-++++.+
T Consensus 128 gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g-~--~~~~ei~~~~~ 203 (302)
T 3fa4_A 128 GKILVDTD-TYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEG-I--TSREMARQVIQ 203 (302)
T ss_dssp CCCBCCHH-HHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETT-C--CCHHHHHHHHH
T ss_pred CCeecCHH-HHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecC-C--CCHHHHHHHHH
Confidence 77777653 444444433 23345555432211 24566654 458999997743 1 23445555555
Q ss_pred HH
Q 012517 440 EL 441 (462)
Q Consensus 440 ~L 441 (462)
.+
T Consensus 204 ~~ 205 (302)
T 3fa4_A 204 DL 205 (302)
T ss_dssp HT
T ss_pred Hh
Confidence 44
No 451
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=86.84 E-value=6.6 Score=35.41 Aligned_cols=108 Identities=19% Similarity=0.220 Sum_probs=61.8
Q ss_pred HHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHH
Q 012517 259 YVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAV 337 (462)
Q Consensus 259 y~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~ 337 (462)
+.+.++.+.+ .+|+|++.. |+. +.+.+.++++.+++.++. .+.||++. ++ ++.
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~--~~~-------~~~~~~~~~~~l~~~~~~------~~v~v~v~-------~~----~~~ 81 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRI--KNA-------PTREMYEIGKTLRQLTRE------YDALFFVD-------DR----VDV 81 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECC--CSC-------CHHHHHHHHHHHHHHHHH------TTCEEEEE-------SC----HHH
T ss_pred HHHHHHHHHHCCCCEEEECC--CCC-------CHHHHHHHHHHHHHHHHH------cCCeEEEc-------Ch----HHH
Confidence 3333444433 499998874 321 123345556666554432 25788883 12 256
Q ss_pred HHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCC
Q 012517 338 AVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGA 417 (462)
Q Consensus 338 ~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGA 417 (462)
+.+.|+|+|++..... ..+.+++++ .+.++.+. +.|.+++.+....|+
T Consensus 82 a~~~gad~v~l~~~~~--------------------------~~~~~~~~~---~~~~~~v~---~~t~~e~~~~~~~g~ 129 (215)
T 1xi3_A 82 ALAVDADGVQLGPEDM--------------------------PIEVAKEIA---PNLIIGAS---VYSLEEALEAEKKGA 129 (215)
T ss_dssp HHHHTCSEEEECTTSC--------------------------CHHHHHHHC---TTSEEEEE---ESSHHHHHHHHHHTC
T ss_pred HHHcCCCEEEECCccC--------------------------CHHHHHHhC---CCCEEEEe---cCCHHHHHHHHhcCC
Confidence 7788999998643210 112333332 22222222 478999999889999
Q ss_pred CEEEEch
Q 012517 418 TLVQLYT 424 (462)
Q Consensus 418 d~Vqv~T 424 (462)
|.|.+.+
T Consensus 130 d~i~~~~ 136 (215)
T 1xi3_A 130 DYLGAGS 136 (215)
T ss_dssp SEEEEEC
T ss_pred CEEEEcC
Confidence 9999744
No 452
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.77 E-value=24 Score=34.27 Aligned_cols=213 Identities=12% Similarity=0.061 Sum_probs=110.8
Q ss_pred CcEEeCCCCCCCHHHHHHHHcCCccEEEecc--cccCCCCCCCCCceeeecCCCcccccCCCCchhHHHHHHHHHHhhcc
Q 012517 137 NPLGLAAGFDKNAEAVEGLLGLGFGFVEVGS--VTPVPQEGNPKPRIFRLRQEGAIINRCGFNSEGIVAVAKRLGAQHGK 214 (462)
Q Consensus 137 NPiglAAG~dk~~e~~~~l~~lGfG~Vevgt--vT~~pq~GNp~PR~frl~~d~a~iN~~G~nn~G~~~~~~~l~~~~~~ 214 (462)
.||.+..-+|-... ..+.+.||-++-+++ +.-- -|.| |.+. -.++.+...++...+-
T Consensus 15 ~~i~~~~a~D~~sA--~~~~~aG~~ai~vs~~~~a~~--~G~p---------D~~~--------vt~~em~~~~~~I~~~ 73 (290)
T 2hjp_A 15 RLFTAMAAHNPLVA--KLAEQAGFGGIWGSGFELSAS--YAVP---------DANI--------LSMSTHLEMMRAIAST 73 (290)
T ss_dssp CCEEEEECSSHHHH--HHHHHHTCSEEEECHHHHHHH--TTSC---------TTTC--------SCHHHHHHHHHHHHTT
T ss_pred CcEEEecCCCHHHH--HHHHHcCCCEEEEChHHHHHh--CCCC---------CCCC--------CCHHHHHHHHHHHHhc
Confidence 35555545664222 224457999998885 3211 2332 2211 2356777766654321
Q ss_pred CcccccccCCCCCCCcccCCCCCCCceEEEEecC-CCCCHHHHHHHHHHHHHHcccCcEEEEecc-CCCCCCccc-----
Q 012517 215 RKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGK-NKTSEDAAADYVQGVHTLSQYADYLVINVS-SPNTPGLRM----- 287 (462)
Q Consensus 215 ~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~-nk~t~~~~~dy~~~~~~l~~~aD~leiNvS-sPnt~glr~----- 287 (462)
. +.||.+.+-- .. +++.+..-+..+.+++ ++++.|-=. .|-.+|+..
T Consensus 74 ~-----------------------~~PviaD~d~Gyg-~~~~~~~~v~~l~~aG--a~gv~iED~~~~k~cgH~~~~~k~ 127 (290)
T 2hjp_A 74 V-----------------------SIPLIADIDTGFG-NAVNVHYVVPQYEAAG--ASAIVMEDKTFPKDTSLRTDGRQE 127 (290)
T ss_dssp C-----------------------SSCEEEECTTTTS-SHHHHHHHHHHHHHHT--CSEEEEECBCSSCCC-------CC
T ss_pred C-----------------------CCCEEEECCCCCC-CHHHHHHHHHHHHHhC--CeEEEEcCCCCCccccccccCCCc
Confidence 0 1256666621 12 4553333333333333 888776322 143334322
Q ss_pred ccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCC---ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCc
Q 012517 288 LQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDL---SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPV 364 (462)
Q Consensus 288 lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl---~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~ 364 (462)
+...+ +.++.|+.+++.. ...+.-|..|.-..+ ..++..+=+++..++|+|+|.+-...
T Consensus 128 l~p~~---e~~~kI~Aa~~a~---~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~------------ 189 (290)
T 2hjp_A 128 LVRIE---EFQGKIAAATAAR---ADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ------------ 189 (290)
T ss_dssp BCCHH---HHHHHHHHHHHHC---SSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC------------
T ss_pred ccCHH---HHHHHHHHHHHhc---ccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC------------
Confidence 33333 4444444443321 012344444553321 24677777888999999999874311
Q ss_pred ccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhhhh
Q 012517 365 AKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAFAY 428 (462)
Q Consensus 365 ~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~ 428 (462)
.+.+.++++.+.+++.+|+|++-.-...-+..++-+.| ...|-++..++.
T Consensus 190 --------------~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~r 240 (290)
T 2hjp_A 190 --------------KTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIR 240 (290)
T ss_dssp --------------SSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHH
T ss_pred --------------CCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHH
Confidence 02356788888886559999752100112356777899 999988777653
No 453
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=86.71 E-value=3.4 Score=41.67 Aligned_cols=92 Identities=14% Similarity=0.183 Sum_probs=59.3
Q ss_pred CCCCEEEEecC----C-CChhhHHHHHHHHHHcCCcEEEEe-cCCccCCCCCCCCCcccccCCCCCCcCcc-chHHHHHH
Q 012517 314 GPPPLLVKIAP----D-LSKEDLEDIAAVAVALRLDGLIIS-NTTISRPDPVSKNPVAKETGGLSGKPLLS-LSNNILKE 386 (462)
Q Consensus 314 ~~~Pv~vKisp----d-l~~~~~~~ia~~~~~~GvdgIivs-NTt~~r~~~~~~~~~~~~~GGlSG~~l~~-~al~~v~~ 386 (462)
.+.|++.-+.. . .+. ..+.+++...++|++.+. |.... .. ... |..-+. ..++.|+.
T Consensus 118 p~~~~~anlg~~ql~~~~~~---~~~~~av~~~~a~al~Ihln~~~~---~~-------~p~---g~~~~~~~~~~~i~~ 181 (368)
T 3vkj_A 118 PTIPIIANLGMPQLVKGYGL---KEFQDAIQMIEADAIAVHLNPAQE---VF-------QPE---GEPEYQIYALEKLRD 181 (368)
T ss_dssp SSSCEEEEEEGGGGGTTCCH---HHHHHHHHHTTCSEEEEECCHHHH---HH-------SSS---CCCBCBTHHHHHHHH
T ss_pred cCcceecCcCeeecCCCCCH---HHHHHHHHHhcCCCeEEEecchhh---hh-------CCC---CCchhhHHHHHHHHH
Confidence 46788887764 2 333 344444555577887765 32100 00 001 111111 25788999
Q ss_pred HHHhcCCCccEEE--ecCCCCHHHHHHHHHhCCCEEEEc
Q 012517 387 MYLLTRGKIPLIG--CGGISSGEDAYRKIRAGATLVQLY 423 (462)
Q Consensus 387 i~~~~~~~ipIIg--~GGI~s~~dA~e~i~aGAd~Vqv~ 423 (462)
+++.+ ++|||. +|+-.++++|....++|||.|-+.
T Consensus 182 i~~~~--~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 182 ISKEL--SVPIIVKESGNGISMETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp HHTTC--SSCEEEECSSSCCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHc--CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEe
Confidence 99988 699988 476689999999999999999884
No 454
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.69 E-value=2.2 Score=40.93 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccC-CCC
Q 012517 294 LKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETG-GLS 372 (462)
Q Consensus 294 l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~G-GlS 372 (462)
+.+++..++..++.. +.||++-+.-.+.... .+.+..+.+.|++||.+ |.| +..
T Consensus 65 ~~em~~~~~~I~r~~------~~pviaD~~~Gyg~~~-~~~~~~l~~aGa~gv~i------------------Ed~~~~~ 119 (255)
T 2qiw_A 65 FADYMAVVKKITSAV------SIPVSVDVESGYGLSP-ADLIAQILEAGAVGINV------------------EDVVHSE 119 (255)
T ss_dssp HHHHHHHHHHHHHHC------SSCEEEECTTCTTCCH-HHHHHHHHHTTCCEEEE------------------CSEEGGG
T ss_pred HHHHHHHHHHHHhcC------CCCEEeccCCCcCcHH-HHHHHHHHHcCCcEEEE------------------CCCCCCC
Q ss_pred CCcCccchHHHHHHHHHhcCC----CccEEEecCCC---------------CHHHHHHHHHhCCCEEEE
Q 012517 373 GKPLLSLSNNILKEMYLLTRG----KIPLIGCGGIS---------------SGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 373 G~~l~~~al~~v~~i~~~~~~----~ipIIg~GGI~---------------s~~dA~e~i~aGAd~Vqv 422 (462)
|+.+.+.. +.+.+|+..+.. .+|+..+|-.. .-++|..+.++|||+|.+
T Consensus 120 ~k~l~~~~-e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~ 187 (255)
T 2qiw_A 120 GKRVREAQ-EHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYP 187 (255)
T ss_dssp TTEECCHH-HHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcccCHH-HHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEE
No 455
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=86.50 E-value=5.4 Score=40.77 Aligned_cols=99 Identities=8% Similarity=-0.010 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCC
Q 012517 295 KDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374 (462)
Q Consensus 295 ~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~ 374 (462)
.+.+++|+++. +.++.|+|-....++.++..++++.+.+.++..|- +
T Consensus 209 ~~~v~avrea~-------G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~iE---------q----------------- 255 (415)
T 2p3z_A 209 AAMVADMREKC-------GPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIE---------E----------------- 255 (415)
T ss_dssp HHHHHHHHHHH-------CSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEE---------C-----------------
T ss_pred HHHHHHHHHHh-------CCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceEe---------C-----------------
Confidence 45566666554 34678888877778878888899988887766541 1
Q ss_pred cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhh
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
|+.+-..+-.+++++.++..+||.+-=-+.+..|+.+.++.|++.||+=-.-
T Consensus 256 Pl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~~ 307 (415)
T 2p3z_A 256 CLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGW 307 (415)
T ss_dssp CSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHHH
T ss_pred CCCcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCccc
Confidence 1222345677888888843389888888899999999999999999986554
No 456
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.47 E-value=2.6 Score=45.78 Aligned_cols=91 Identities=18% Similarity=0.168 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCcc-CC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE-------
Q 012517 332 EDIAAVAVALRLDGLIISNTTIS-RP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG------- 399 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~-r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg------- 399 (462)
.+-|+.+.++|+|||-++..-.. .. .+.. +.-..++|| |=.--....+++++.+++.++.++||..
T Consensus 159 ~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~-N~R~D~yGG-s~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~ 236 (690)
T 3k30_A 159 RNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRY-NQRTDEYGG-SLENRMRLLRELLEDTLDECAGRAAVACRITVEEE 236 (690)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTT-CCCCSTTSS-SHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEcccccchHHHHhCCCcc-CCCccccCC-CHHHHHHHHHHHHHHHHHHhCCCceEEEEECcccc
Confidence 34455577899999988642111 00 0000 111235565 2111112467889999999977777643
Q ss_pred -ecCCCCHHHHH---HHHHhCCCEEEEchh
Q 012517 400 -CGGISSGEDAY---RKIRAGATLVQLYTA 425 (462)
Q Consensus 400 -~GGI~s~~dA~---e~i~aGAd~Vqv~Ta 425 (462)
-||++ .+|+. +.++.|+|++.+..+
T Consensus 237 ~~~g~~-~~~~~~~~~~l~~~~d~~~v~~~ 265 (690)
T 3k30_A 237 IDGGIT-REDIEGVLRELGELPDLWDFAMG 265 (690)
T ss_dssp STTSCC-HHHHHHHHHHHTTSSSEEEEECS
T ss_pred CCCCCC-HHHHHHHHHHHHhhcCEEEEecc
Confidence 25654 45544 445568999887654
No 457
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=86.45 E-value=2.4 Score=42.69 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=60.1
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCCCC-CC--CCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRPDP-VS--KNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~~~-~~--~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
++.+||.++ |+.+.++|+|||-+...--...+. +. .+.-..++|| |=..-....+++|+.+++.++.+
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGG-slenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGG-SLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCC-chhhHHHHHHHHHHHHHHhcCCC-
Confidence 555555444 445678999999886431000000 00 0011125565 21111124578889999998654
Q ss_pred cEEE--e-----cCCC---CHHHHH---HHH-HhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 396 PLIG--C-----GGIS---SGEDAY---RKI-RAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 396 pIIg--~-----GGI~---s~~dA~---e~i-~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
||.. + +|+. +.+++. +.+ ++|+|++.+..+- .|+.++.++++.+
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~ 278 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE--ADDSIGPLIKEAF 278 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--CTTCCHHHHHHHH
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--CCHHHHHHHHHHC
Confidence 5543 1 2222 133433 333 4799999987765 3667777777654
No 458
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=86.17 E-value=27 Score=34.17 Aligned_cols=162 Identities=10% Similarity=0.159 Sum_probs=99.3
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHccc-CcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQY-ADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~-aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.+.+-+...| +.+..+.+.+.++++.+. .|++.|..+ +|.. .++.-.++...+++.. .++.+
T Consensus 24 ~~S~E~fPPk-~~~~~~~l~~~~~~l~~l~p~fvsVT~g----agg~---~r~~t~~~a~~i~~~~---------g~~~v 86 (304)
T 3fst_A 24 NVSFEFFPPR-TSEMEQTLWNSIDRLSSLKPKFVSVTYG----ANSG---ERDRTHSIIKGIKDRT---------GLEAA 86 (304)
T ss_dssp EEEEEECCCC-SHHHHHHHHHHHHHHHTTCCSEEEECCC----TTSS---CHHHHHHHHHHHHHHH---------CCCEE
T ss_pred EEEEEEcCCC-CccHHHHHHHHHHHHhcCCCCEEEEeeC----CCCc---chhHHHHHHHHHHHHh---------CCCee
Confidence 3555554433 455555677788888764 788666543 1211 1233334555565432 57777
Q ss_pred EEecC-CCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE
Q 012517 320 VKIAP-DLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI 398 (462)
Q Consensus 320 vKisp-dl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII 398 (462)
.=++. |.+.+++.+++..+.+.|++-|.+--.-... . ..|+ +..+.++|+.+++.. ++- |
T Consensus 87 ~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~---------~-~~~~------~~~A~dLv~~ir~~~--~f~-I 147 (304)
T 3fst_A 87 PHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPP---------G-SGKP------EMYASDLVTLLKEVA--DFD-I 147 (304)
T ss_dssp EEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC----------------------CCCHHHHHHHHHHHC--CCE-E
T ss_pred EEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCC---------C-CCCC------CCCHHHHHHHHHHcC--CCe-E
Confidence 87775 6777899999999999999998876332100 0 1122 346889999998874 443 4
Q ss_pred EecC-------CCCHH----HHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHH
Q 012517 399 GCGG-------ISSGE----DAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 441 (462)
Q Consensus 399 g~GG-------I~s~~----dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L 441 (462)
++.+ ..+.+ -..+++++||+.+ -|-++| +++.+.++.+.+
T Consensus 148 gvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~--iTQ~ff-D~~~~~~f~~~~ 198 (304)
T 3fst_A 148 SVAAYPEVHPEAKSAQADLLNLKRKVDAGANRA--ITQFFF-DVESYLRFRDRC 198 (304)
T ss_dssp EEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEE--EECCCS-CHHHHHHHHHHH
T ss_pred EEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEE--EeCccC-CHHHHHHHHHHH
Confidence 5544 23432 3467778999984 577777 566666665544
No 459
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=85.96 E-value=1.3 Score=41.58 Aligned_cols=123 Identities=12% Similarity=0.031 Sum_probs=72.6
Q ss_pred HHHHHHHHHcc-cCcEEEEeccC-CCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSS-PNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSs-Pnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia 335 (462)
++.+.++.+.+ .+|++++.+.- +-.| +-..-.++++++++. .+.|+.+-+--+ +. ...+
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG~fvp------~~~~g~~~v~~lr~~---------~~~~~~vhlmv~-dp---~~~i 78 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDGRFVP------NITIGPLIVDAIRPL---------TKKTLDVHLMIV-EP---EKYV 78 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSS------CBCBCHHHHHHHGGG---------CCSEEEEEEESS-SG---GGTH
T ss_pred HHHHHHHHHHHcCCCEEEEEEEecCCCc------chhhhHHHHHHHHhh---------cCCcEEEEEEcc-CH---HHHH
Confidence 44444555544 49999998731 1111 112222666666543 246777444322 11 3456
Q ss_pred HHHHHcCCcEEEEecC--CccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHH
Q 012517 336 AVAVALRLDGLIISNT--TISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKI 413 (462)
Q Consensus 336 ~~~~~~GvdgIivsNT--t~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i 413 (462)
+.+.++|+|||+++-. .. +...+.++.+++.- ....+.+ .-.|+.+..+.+
T Consensus 79 ~~~~~aGadgv~vh~e~~~~------------------------~~~~~~~~~i~~~g--~~~gv~~-~p~t~~e~~~~~ 131 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS------------------------PHLHRTLCQIRELG--KKAGAVL-NPSTPLDFLEYV 131 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC------------------------TTHHHHHHHHHHTT--CEEEEEE-CTTCCGGGGTTT
T ss_pred HHHHHcCCCEEEECcccccc------------------------hhHHHHHHHHHHcC--CcEEEEE-eCCCcHHHHHHH
Confidence 8888999999998833 10 11346667776642 3444444 567888888888
Q ss_pred HhCCCEEEEchhh
Q 012517 414 RAGATLVQLYTAF 426 (462)
Q Consensus 414 ~aGAd~Vqv~Tal 426 (462)
..++|.|.+.+-.
T Consensus 132 ~~~~D~v~~msv~ 144 (230)
T 1tqj_A 132 LPVCDLILIMSVN 144 (230)
T ss_dssp GGGCSEEEEESSC
T ss_pred HhcCCEEEEEEec
Confidence 8899999777654
No 460
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=85.92 E-value=19 Score=36.20 Aligned_cols=137 Identities=18% Similarity=0.139 Sum_probs=90.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
++..+++.. .+++ ++.+.++++. ..+..+-+.+. |. . + .+.+++|+++. .+..|+
T Consensus 139 ~~~~~~~~~-~~~e---~~~~~~~~~~~~G~~~~K~Kv~-~~----~---d----~~~v~avR~~~--------~~~~l~ 194 (388)
T 3qld_A 139 EVSATLGMS-ESLD---VLIQSVDAAVEQGFRRVKLKIA-PG----R---D----RAAIKAVRLRY--------PDLAIA 194 (388)
T ss_dssp EBEEEECCC-SCHH---HHHHHHHHHHHTTCSEEEEECB-TT----B---S----HHHHHHHHHHC--------TTSEEE
T ss_pred EEeEEecCC-CCHH---HHHHHHHHHHHhCCCeEEEEeC-cH----H---H----HHHHHHHHHHC--------CCCeEE
Confidence 456666543 2355 5555555443 45888888874 21 1 1 35666776653 356777
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEE
Q 012517 320 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIG 399 (462)
Q Consensus 320 vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg 399 (462)
|-....++.++... ++.+.+.++..|- .|+.+...+..+++++.+ .+||.+
T Consensus 195 vDaN~~~~~~~A~~-~~~l~~~~i~~iE--------------------------eP~~~~d~~~~~~l~~~~--~ipIa~ 245 (388)
T 3qld_A 195 ADANGSYRPEDAPV-LRQLDAYDLQFIE--------------------------QPLPEDDWFDLAKLQASL--RTPVCL 245 (388)
T ss_dssp EECTTCCCGGGHHH-HHHGGGGCCSCEE--------------------------CCSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred EECCCCCChHHHHH-HHHHhhCCCcEEE--------------------------CCCCcccHHHHHHHHHhC--CCCEEe
Confidence 77776677777654 6777666554331 122233456778888888 699998
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEchhhhhcCC
Q 012517 400 CGGISSGEDAYRKIRAG-ATLVQLYTAFAYGGP 431 (462)
Q Consensus 400 ~GGI~s~~dA~e~i~aG-Ad~Vqv~Tali~~GP 431 (462)
-=-+.+..|..+.++.| +|.||+--+.+ .|.
T Consensus 246 dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGi 277 (388)
T 3qld_A 246 DESVRSVRELKLTARLGAARVLNVKPGRL-GGF 277 (388)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHHHH-TSH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEEECchhh-CCH
Confidence 88899999999999987 89999987664 343
No 461
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.88 E-value=20 Score=40.81 Aligned_cols=98 Identities=18% Similarity=0.133 Sum_probs=62.8
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
+.|+++=+....+.+++.+.++.+.+.|+|+|.+.=..... ......|+--+. -.....++++.+++.+ +
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-------~~~~~~G~~~~~-~~~~~~~iv~~v~~~~--~ 703 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-------MGERGMGLACGQ-DPELVRNICRWVRQAV--Q 703 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-------CC-----SBGGG-CHHHHHHHHHHHHHHC--S
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-------CCCCCccccccc-CHHHHHHHHHHHHHhh--C
Confidence 56888888544556789999999999999999874221110 001112221111 1234567888999888 6
Q ss_pred ccEEE--ecCCCCHHH-HHHHHHhCCCEEEE
Q 012517 395 IPLIG--CGGISSGED-AYRKIRAGATLVQL 422 (462)
Q Consensus 395 ipIIg--~GGI~s~~d-A~e~i~aGAd~Vqv 422 (462)
+||+. ..++.+..+ |....++|+|.|-+
T Consensus 704 ~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 704 IPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp SCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 88874 556666555 55556799999999
No 462
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=85.74 E-value=4.8 Score=41.29 Aligned_cols=106 Identities=11% Similarity=0.058 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCEEEEe----------------c-CCCChhhHHHHHHHHHH-cCCcEEEEecCCccCC
Q 012517 295 KDLVKKVQAARDEMQWGEEGPPPLLVKI----------------A-PDLSKEDLEDIAAVAVA-LRLDGLIISNTTISRP 356 (462)
Q Consensus 295 ~~ll~aV~~~~~~~~~~~~~~~Pv~vKi----------------s-pdl~~~~~~~ia~~~~~-~GvdgIivsNTt~~r~ 356 (462)
.+.+++|+++.++.....+.++.|+|-. . ..++.++..++++.+.+ .++..|-
T Consensus 219 ~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~i~~iE--------- 289 (431)
T 2fym_A 219 AEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIE--------- 289 (431)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCEEEEE---------
T ss_pred HHHHHHHHHHHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCCceEEE---------
Confidence 4556666666543321113456677766 2 23566778888888877 6543321
Q ss_pred CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec-CCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 357 DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG-GISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 357 ~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G-GI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
+ |+.+-..+-.+++++.++.++||++-= -+++.++..+.++.| ++.||+=-.-
T Consensus 290 e-----------------Pl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~ 344 (431)
T 2fym_A 290 D-----------------GLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQ 344 (431)
T ss_dssp S-----------------CSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGG
T ss_pred C-----------------CCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccc
Confidence 1 122234566788888875568988777 789999999999988 8999986544
No 463
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=85.55 E-value=25 Score=33.30 Aligned_cols=150 Identities=19% Similarity=0.194 Sum_probs=88.0
Q ss_pred eEEEEecC--------CCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccC
Q 012517 241 ILGVNIGK--------NKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWG 311 (462)
Q Consensus 241 ~lgvnig~--------nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~ 311 (462)
.|||||-+ ....| |-++++..+.. .||.|.+++- +..|-.|+.|. ..+++.
T Consensus 5 ~LgVNIdhVAtLRnaRg~~~P----dpv~aA~~ae~aGAdgITvHlR----eDrRHI~d~Dv-----~~L~~~------- 64 (243)
T 1m5w_A 5 LLGVNIDHIATLRNARGTAYP----DPVQAAFIAEQAGADGITVHLR----EDRRHITDRDV-----RILRQT------- 64 (243)
T ss_dssp EEEEECHHHHHHHHTSSCCCS----CHHHHHHHHHTTTCSEEEEECC----TTCSSSCHHHH-----HHHHHH-------
T ss_pred eEeeeHHHhhhhhccCCCCCC----CHHHHHHHHHHcCCCEEEeCCC----CCcccCCHHHH-----HHHHHh-------
Confidence 69999931 11123 33444444433 3999999962 33455555442 223322
Q ss_pred CCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhc
Q 012517 312 EEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLT 391 (462)
Q Consensus 312 ~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~ 391 (462)
.+.|+=+-++|. .++.+.+++..-+-+++.-- +.+.+ ...|||.=..-...-...++++++.-
T Consensus 65 --~~~~lNlE~a~t------~emi~ia~~~kP~~vtLVPE---~r~e~------TTegGldv~~~~~~l~~~i~~L~~~G 127 (243)
T 1m5w_A 65 --LDTRMNLEMAVT------EEMLAIAVETKPHFCCLVPE---KRQEV------TTEGGLDVAGQRDKMRDACKRLADAG 127 (243)
T ss_dssp --CSSEEEEEECSS------HHHHHHHHHHCCSEEEECCC---CSSCS------SCCSCCCSGGGHHHHHHHHHHHHHTT
T ss_pred --cCCCEEeccCCC------HHHHHHHHHcCCCEEEECCC---CCCCc------CCCcchhHHhhHHHHHHHHHHHHHCC
Confidence 246787888774 35666677777888877522 11111 13467653333334455666666542
Q ss_pred CCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCC
Q 012517 392 RGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGP 431 (462)
Q Consensus 392 ~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP 431 (462)
=++-++.- -+.+++....+.||+.|.+||+-...-.
T Consensus 128 -IrVSLFID---pd~~qi~aA~~~GA~~IELhTG~Ya~a~ 163 (243)
T 1m5w_A 128 -IQVSLFID---ADEEQIKAAAEVGAPFIEIHTGCYADAK 163 (243)
T ss_dssp -CEEEEEEC---SCHHHHHHHHHTTCSEEEEECHHHHHCC
T ss_pred -CEEEEEeC---CCHHHHHHHHHhCcCEEEEechhhhcCC
Confidence 13344443 5789999999999999999999865433
No 464
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=85.43 E-value=11 Score=38.11 Aligned_cols=132 Identities=8% Similarity=0.107 Sum_probs=83.2
Q ss_pred HHHHHHHHH-cccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTL-SQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l-~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
++++.+++. ...+..+-+.+..+... .......+.-.+.+++|+++. .+..|+|-....++.++..++++
T Consensus 168 ~~~~~a~~~~~~Gf~~iKlKvg~~~~~-~~~~~~~~~di~~v~avR~a~--------~d~~L~vDaN~~w~~~~A~~~~~ 238 (393)
T 3u9i_A 168 AAARAAQAIVARGVTTIKIKIGAGDPD-ATTIRTMEHDLARIVAIRDVA--------PTARLILDGNCGYTAPDALRLLD 238 (393)
T ss_dssp HHHHHHHHHHTTTCCEEEEECC--------CHHHHHHHHHHHHHHHHHS--------TTSEEEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCCccc-ccccccHHHHHHHHHHHHHHC--------CCCeEEEEccCCCCHHHHHHHHH
Confidence 555555554 34688999888653210 000011222334555555542 25677777777788778778888
Q ss_pred HH--HHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHH
Q 012517 337 VA--VALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIR 414 (462)
Q Consensus 337 ~~--~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~ 414 (462)
.+ .+.++..|- . |+.+...+..+++++.+ .+||.+-=-+.+..|+.+.++
T Consensus 239 ~L~~~~~~i~~iE-------e-------------------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 290 (393)
T 3u9i_A 239 MLGVHGIVPALFE-------Q-------------------PVAKDDEEGLRRLTATR--RVPVAADESVASATDAARLAR 290 (393)
T ss_dssp TTTTTTCCCSEEE-------C-------------------CSCTTCTTHHHHHHHTC--SSCEEESTTCCSHHHHHHHHH
T ss_pred HHhhCCCCeEEEE-------C-------------------CCCCCcHHHHHHHHhhC--CCcEEeCCcCCCHHHHHHHHH
Confidence 77 555555431 1 11222345567888888 699999889999999999999
Q ss_pred hC-CCEEEEchhh
Q 012517 415 AG-ATLVQLYTAF 426 (462)
Q Consensus 415 aG-Ad~Vqv~Tal 426 (462)
.| +|.||+=-+.
T Consensus 291 ~~a~d~i~~k~~~ 303 (393)
T 3u9i_A 291 NAAVDVLNIKLMK 303 (393)
T ss_dssp TTCCSEEEECHHH
T ss_pred cCCCCEEEecccc
Confidence 87 8999988766
No 465
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.34 E-value=5.2 Score=39.83 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=54.4
Q ss_pred CChhhHH-------HHHHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 326 LSKEDLE-------DIAAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 326 l~~~~~~-------~ia~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++.+||. +-|+.+.++|+|||-+.-.--... .+.. +.-..++|| |=..-....+++++.+++.++.+
T Consensus 142 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGG-slenR~r~~~eiv~aVR~avG~d 219 (349)
T 3hgj_A 142 LDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLS-NQRTDAYGG-SLENRMRFPLQVAQAVREVVPRE 219 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTT-CCCCSTTSS-SHHHHHHHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcc-cccCCCCCc-CHHHHHHHHHHHHHHHHHHhcCC
Confidence 5555554 344557789999998763310000 0000 011224555 20001123578999999999878
Q ss_pred ccEEE--e------cCCCCHHHHHHH----HHhCCCEEEEchh
Q 012517 395 IPLIG--C------GGISSGEDAYRK----IRAGATLVQLYTA 425 (462)
Q Consensus 395 ipIIg--~------GGI~s~~dA~e~----i~aGAd~Vqv~Ta 425 (462)
+||.. + ||. +.+|+.++ -++|+|.+.+..+
T Consensus 220 ~pV~vRls~~~~~~~g~-~~~~~~~la~~L~~~Gvd~i~vs~g 261 (349)
T 3hgj_A 220 LPLFVRVSATDWGEGGW-SLEDTLAFARRLKELGVDLLDCSSG 261 (349)
T ss_dssp SCEEEEEESCCCSTTSC-CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEeccccccCCCC-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 87754 2 344 45664443 3579999999753
No 466
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=84.93 E-value=6.5 Score=38.73 Aligned_cols=118 Identities=13% Similarity=0.068 Sum_probs=80.0
Q ss_pred ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHc---CCc
Q 012517 268 QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVAL---RLD 344 (462)
Q Consensus 268 ~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~---Gvd 344 (462)
..+..+-+.+... +.+.-.+.+++|+++. +.+..|+|-....++.++..++++.+.+. ++.
T Consensus 130 ~G~~~~KiKvg~~---------~~~~d~~~v~avr~~~-------g~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~~~i~ 193 (332)
T 2ozt_A 130 RGQTTFKWKVGVM---------SPEEEQAILKALLAAL-------PPGAKLRLDANGSWDRATANRWFAWLDRHGNGKIE 193 (332)
T ss_dssp TTCCEEEEECSSS---------CHHHHHHHHHHHHHHS-------CTTCEEEEECTTCCCHHHHHHHHHHHHHHCCTTEE
T ss_pred cCCcEEEEEeCCC---------ChHHHHHHHHHHHHHc-------CCCCEEEEcccCCCCHHHHHHHHHHHHhhccCCcc
Confidence 3477788776421 1122235566666653 33567777766667778888999999887 544
Q ss_pred EEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q 012517 345 GLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLY 423 (462)
Q Consensus 345 gIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~ 423 (462)
.|- . |+.+-..+..+++++.+ .+||.+-=-+.+..|+.+.++.| ++.+++=
T Consensus 194 ~iE-------q-------------------P~~~~d~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik 245 (332)
T 2ozt_A 194 YVE-------Q-------------------PLPPDQWQALLSLAQTV--TTAIALDESVVSAAEVQRWVDRGWPGFFVIK 245 (332)
T ss_dssp EEE-------C-------------------CSCTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred eeE-------C-------------------CCCCCCHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 321 1 12223456778888887 69999998999999999999998 6888886
Q ss_pred hhhhhcC
Q 012517 424 TAFAYGG 430 (462)
Q Consensus 424 Tali~~G 430 (462)
-..+ .|
T Consensus 246 ~~~~-GG 251 (332)
T 2ozt_A 246 TALF-GD 251 (332)
T ss_dssp HHHH-SC
T ss_pred hhhh-CC
Confidence 5553 45
No 467
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=84.85 E-value=5.8 Score=38.17 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=61.1
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHH-cCCcEEEEecCCccCCCCCCCCCcccccCCCC-CCcCccchHHHHHHHHHhcC
Q 012517 315 PPPLLVKIAPDLSKEDLEDIAAVAVA-LRLDGLIISNTTISRPDPVSKNPVAKETGGLS-GKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 315 ~~Pv~vKispdl~~~~~~~ia~~~~~-~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlS-G~~l~~~al~~v~~i~~~~~ 392 (462)
+.|+.+=|... +.++..+.++.+.+ .|+|+|.+.=. .+ .. ..||.. |. -.....++++.+++.+
T Consensus 98 ~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d~iei~~~---~p-------~~-~~g~~~~g~-~~~~~~eii~~v~~~~- 163 (311)
T 1ep3_A 98 ELPIIANVAGS-EEADYVAVCAKIGDAANVKAIELNIS---CP-------NV-KHGGQAFGT-DPEVAAALVKACKAVS- 163 (311)
T ss_dssp TSCEEEEECCS-SHHHHHHHHHHHTTSTTEEEEEEECC---SE-------EG-GGTTEEGGG-CHHHHHHHHHHHHHHC-
T ss_pred CCcEEEEEcCC-CHHHHHHHHHHHhccCCCCEEEEeCC---CC-------CC-CCchhhhcC-CHHHHHHHHHHHHHhc-
Confidence 67999988754 34678888888888 99999987411 11 00 011111 10 0123468888999887
Q ss_pred CCccEEE--ecCCCCHHH-HHHHHHhCCCEEEE
Q 012517 393 GKIPLIG--CGGISSGED-AYRKIRAGATLVQL 422 (462)
Q Consensus 393 ~~ipIIg--~GGI~s~~d-A~e~i~aGAd~Vqv 422 (462)
++||+. +.++.+..+ +..+.++|+|.|.+
T Consensus 164 -~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 164 -KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp -SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred -CCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 578765 346777666 66666899999998
No 468
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=84.81 E-value=6.1 Score=38.56 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-HH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-ED 408 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~d 408 (462)
+.++..+.+++.|+|.+-++-.| ..|-|.|.| .+..+.+++|++.+ ++|++-=||=..+ ++
T Consensus 160 ~Peea~~Fv~~TgvD~LAvaiGt--------------~HG~Y~~~p--~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~ 221 (288)
T 3q94_A 160 DPAECKHLVEATGIDCLAPALGS--------------VHGPYKGEP--NLGFAEMEQVRDFT--GVPLVLHGGTGIPTAD 221 (288)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSC--------------BSSCCSSSC--CCCHHHHHHHHHHH--CSCEEECCCTTCCHHH
T ss_pred CHHHHHHHHHHHCCCEEEEEcCc--------------ccCCcCCCC--ccCHHHHHHHHHhc--CCCEEEeCCCCCCHHH
Confidence 45677777889999999887554 234455543 35678899999999 5999988886655 45
Q ss_pred HHHHHHhCCCEEEEchhhh
Q 012517 409 AYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali 427 (462)
..++++.|..=|-++|-+.
T Consensus 222 i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 222 IEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp HHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHcCCeEEEEChHHH
Confidence 8888899999999999874
No 469
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=84.76 E-value=2.9 Score=42.62 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=38.1
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCCCC-CC--CCCcccccCCCCCCcCccchHHHHHHHHHhcCCCc
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRPDP-VS--KNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKI 395 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~~~-~~--~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~i 395 (462)
++.+||.++ |..+.++|.|||-++..--...+. +. .+.-..++|| |=.--....+++|+.||+.++.+
T Consensus 162 mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGG-S~ENR~Rf~lEVi~aVr~~vg~d- 239 (400)
T 4gbu_A 162 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGG-SIENRARFTLEVVDALVEAIGHE- 239 (400)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHHHCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCC-cHHHHHHHHHHHHHHHHHHcCCC-
Confidence 565565544 444789999999987532000000 00 0111236676 21111224678999999999755
Q ss_pred cE
Q 012517 396 PL 397 (462)
Q Consensus 396 pI 397 (462)
||
T Consensus 240 ~v 241 (400)
T 4gbu_A 240 KV 241 (400)
T ss_dssp GE
T ss_pred cE
Confidence 65
No 470
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=84.69 E-value=4.8 Score=40.03 Aligned_cols=88 Identities=16% Similarity=0.128 Sum_probs=60.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec--CC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG--GI 403 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G--GI 403 (462)
++.++..++++.+.+.|+|-|-++... +.+.. . + .. |++ .....+.++++++..+ +++|.+-+ |.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~-g~p~s--s-p---~~----g~~-~~~~~e~l~~i~~~~~-~~~i~~l~~p~~ 93 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGD-GLQGS--S-F---NY----GFG-RHTDLEYIEAVAGEIS-HAQIATLLLPGI 93 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTT-STTCC--B-T---TT----BCC-SSCHHHHHHHHHTTCS-SSEEEEEECBTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-CCCCC--C-C---cc----cCC-CCCHHHHHHHHHhhCC-CCEEEEEecCCc
Confidence 556789999999999999999875110 00000 0 0 00 222 2235688888888765 67877664 56
Q ss_pred CCHHHHHHHHHhCCCEEEEchhh
Q 012517 404 SSGEDAYRKIRAGATLVQLYTAF 426 (462)
Q Consensus 404 ~s~~dA~e~i~aGAd~Vqv~Tal 426 (462)
...+++.+..++|++.|.+...+
T Consensus 94 ~~~~~i~~a~~aGvd~v~I~~~~ 116 (345)
T 1nvm_A 94 GSVHDLKNAYQAGARVVRVATHC 116 (345)
T ss_dssp BCHHHHHHHHHHTCCEEEEEEET
T ss_pred ccHHHHHHHHhCCcCEEEEEEec
Confidence 67899999999999999998654
No 471
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=84.54 E-value=11 Score=37.66 Aligned_cols=125 Identities=6% Similarity=-0.006 Sum_probs=81.7
Q ss_pred HHHHHHHHHc-ccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCC-CCCCEEEEecCCCChhhHHHHH
Q 012517 258 DYVQGVHTLS-QYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEE-GPPPLLVKIAPDLSKEDLEDIA 335 (462)
Q Consensus 258 dy~~~~~~l~-~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~-~~~Pv~vKispdl~~~~~~~ia 335 (462)
++++.++++. ..+..+-+.+... +.+.-.+.+++|+++. + .+..|.|-....++.++..+++
T Consensus 165 ~~~~~a~~~~~~G~~~~K~Kvg~~---------~~~~d~~~v~avr~~~-------g~~~~~l~vDaN~~~~~~~a~~~~ 228 (377)
T 2pge_A 165 FMQEQIEAKLAEGYGCLKLKIGAI---------DFDKECALLAGIRESF-------SPQQLEIRVDANGAFSPANAPQRL 228 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC------------CHHHHHHHHHHHHHHS-------CTTTCEEEEECTTBBCTTTHHHHH
T ss_pred HHHHHHHHHHHHhhhhheeecCCC---------ChHHHHHHHHHHHHHc-------CCCCceEEEECCCCCCHHHHHHHH
Confidence 4444444433 3578888876431 2233345666666543 3 4677888776667777888899
Q ss_pred HHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHH--HHHHH
Q 012517 336 AVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGED--AYRKI 413 (462)
Q Consensus 336 ~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~d--A~e~i 413 (462)
+.+.+.++..|- + |+.+...+..+++++.+ .+||.+-=-+.+..| ..+.+
T Consensus 229 ~~l~~~~i~~iE---------q-----------------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~i 280 (377)
T 2pge_A 229 KRLSQFHLHSIE---------Q-----------------PIRQHQWSEMAALCANS--PLAIALDEELIGLGAEQRSAML 280 (377)
T ss_dssp HHHHTTCCSEEE---------C-----------------CBCSSCHHHHHHHHHHC--SSCEEESGGGTTCCTHHHHHHH
T ss_pred HHHhcCCCcEEE---------c-----------------cCCcccHHHHHHHHhhC--CCcEEECCccCCcchHHHHHHH
Confidence 999988766541 0 12223456678888887 699999888888877 66888
Q ss_pred HhC-CCEEEEchhh
Q 012517 414 RAG-ATLVQLYTAF 426 (462)
Q Consensus 414 ~aG-Ad~Vqv~Tal 426 (462)
+.| ++.||+=-.-
T Consensus 281 ~~~a~d~i~ik~~~ 294 (377)
T 2pge_A 281 DAIRPQYIILKPSL 294 (377)
T ss_dssp HHHCCSEEEECHHH
T ss_pred HhCCCCEEEECchh
Confidence 766 8999886655
No 472
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=84.34 E-value=9.7 Score=38.39 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe--c----
Q 012517 332 EDIAAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC--G---- 401 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~--G---- 401 (462)
.+-|+.+.++|+|||-+.-.--... .... +....++|| |=..-....+++++.+++.++.+ ||..= .
T Consensus 169 ~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~-N~R~D~yGG-slenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~~ 245 (377)
T 2r14_A 169 RQAAQRAKRAGFDMVEVHAANACLPNQFLATGT-NRRTDQYGG-SIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTT-CCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCC
T ss_pred HHHHHHHHHcCCCEEEEcCcccchHHhccCCcc-ccCCCccCc-chhhchHHHHHHHHHHHHHcCCC-cEEEEecccccc
Confidence 3444556789999998753210000 0000 001124555 20111123578889999998644 65442 1
Q ss_pred -CC---CCHHHHH----HHHHhCCCEEEEchhh
Q 012517 402 -GI---SSGEDAY----RKIRAGATLVQLYTAF 426 (462)
Q Consensus 402 -GI---~s~~dA~----e~i~aGAd~Vqv~Tal 426 (462)
|+ .+.+++. ..-++|++.+.+..+.
T Consensus 246 ~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~ 278 (377)
T 2r14_A 246 FGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPD 278 (377)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 11 1345533 3335899999997653
No 473
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=84.27 E-value=12 Score=35.66 Aligned_cols=131 Identities=11% Similarity=0.157 Sum_probs=75.8
Q ss_pred CcEEEEec----cCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcE
Q 012517 270 ADYLVINV----SSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDG 345 (462)
Q Consensus 270 aD~leiNv----SsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~Gvdg 345 (462)
+|++.+.+ ..||.. +=.++++++++.. .+.|+-+.+-..- ....++.+.++|+|.
T Consensus 54 ~d~lHvDVmDg~FVpnit---------~G~~~v~~lr~~~--------p~~~ldvHLmv~~----p~~~i~~~~~aGAd~ 112 (246)
T 3inp_A 54 ADNIHFDVMDNHYVPNLT---------FGPMVLKALRDYG--------ITAGMDVHLMVKP----VDALIESFAKAGATS 112 (246)
T ss_dssp CCCEEEEEEBSSSSSCBC---------CCHHHHHHHHHHT--------CCSCEEEEEECSS----CHHHHHHHHHHTCSE
T ss_pred CCEEEEEecCCCcCcchh---------cCHHHHHHHHHhC--------CCCeEEEEEeeCC----HHHHHHHHHHcCCCE
Confidence 88888843 345542 1125677777652 3689999887542 345678888999999
Q ss_pred EEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchh
Q 012517 346 LIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 346 IivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Ta 425 (462)
|++.--.. +...+.++++++.- ..+-++.---+..+ .++.+..+.|.|.+.|-
T Consensus 113 itvH~Ea~------------------------~~~~~~i~~ir~~G--~k~Gvalnp~Tp~e-~l~~~l~~vD~VlvMsV 165 (246)
T 3inp_A 113 IVFHPEAS------------------------EHIDRSLQLIKSFG--IQAGLALNPATGID-CLKYVESNIDRVLIMSV 165 (246)
T ss_dssp EEECGGGC------------------------SCHHHHHHHHHTTT--SEEEEEECTTCCSG-GGTTTGGGCSEEEEECS
T ss_pred EEEccccc------------------------hhHHHHHHHHHHcC--CeEEEEecCCCCHH-HHHHHHhcCCEEEEeee
Confidence 99873210 01346677776652 34455554444444 44444447899987552
Q ss_pred h-hhcC----CChHHHHHHHHHHHHHHcC
Q 012517 426 F-AYGG----PALIPQIKAELAECLERDG 449 (462)
Q Consensus 426 l-i~~G----P~~i~~i~~~L~~~l~~~G 449 (462)
- -+.| |....+|+ +++++..+.|
T Consensus 166 ~PGfgGQ~fi~~~l~KI~-~lr~~~~~~~ 193 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAK-EISKWISSTD 193 (246)
T ss_dssp CTTC--CCCCTTHHHHHH-HHHHHHHHHT
T ss_pred cCCCCCcccchHHHHHHH-HHHHHHHhcC
Confidence 1 1123 55555654 4555555545
No 474
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=84.24 E-value=13 Score=29.95 Aligned_cols=89 Identities=13% Similarity=0.193 Sum_probs=61.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh-cCCCccEEEecCCCCHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL-TRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~-~~~~ipIIg~GGI~s~~dA 409 (462)
..+..+.+.+...|.|++.-... +.+ ..++++++++. ....+|||...+-.+.+..
T Consensus 43 ~~~a~~~l~~~~~dlii~d~~l~----------------~~~-------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~ 99 (143)
T 3cnb_A 43 PFDAGDLLHTVKPDVVMLDLMMV----------------GMD-------GFSICHRIKSTPATANIIVIAMTGALTDDNV 99 (143)
T ss_dssp HHHHHHHHHHTCCSEEEEETTCT----------------TSC-------HHHHHHHHHTSTTTTTSEEEEEESSCCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecccC----------------CCc-------HHHHHHHHHhCccccCCcEEEEeCCCCHHHH
Confidence 34455566666788776643221 111 35788888873 2237999999999999999
Q ss_pred HHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcC
Q 012517 410 YRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDG 449 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G 449 (462)
.+.+++||+.+ +. -|.-..++.+.+...++...
T Consensus 100 ~~~~~~g~~~~------l~-kP~~~~~l~~~i~~~~~~~~ 132 (143)
T 3cnb_A 100 SRIVALGAETC------FG-KPLNFTLLEKTIKQLVEQKK 132 (143)
T ss_dssp HHHHHTTCSEE------EE-SSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCcEE------Ee-CCCCHHHHHHHHHHHHHhhc
Confidence 99999998865 23 37777888888888776554
No 475
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=84.23 E-value=2.1 Score=41.50 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=50.5
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEE-EecCCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLI-GCGGIS 404 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipII-g~GGI~ 404 (462)
++.+.+..+++.+.+. +|||++..||-.-. -|| .-+..+-++..+. ++||| |+|+.
T Consensus 16 iD~~~l~~lv~~li~~-v~gl~v~GttGE~~-------------~Ls-------~~Er~~v~~~~~~-rvpviaGvg~~- 72 (283)
T 2pcq_A 16 LDEEAFRELAQALEPL-VDGLLVYGSNGEGV-------------HLT-------PEERARGLRALRP-RKPFLVGLMEE- 72 (283)
T ss_dssp BCHHHHHHHHHHHGGG-SSCCEETCTTTTGG-------------GSC-------HHHHHHHHHTCCC-SSCCEEEECCS-
T ss_pred cCHHHHHHHHHHHHhh-CCEEEECCcCcCch-------------hcC-------HHHHHHHHHHHHh-CCcEEEeCCCC-
Confidence 5566789999999999 99999887763211 011 1122222222233 67765 55554
Q ss_pred CHHHHHHHH----HhCCCEEEEchhhhh
Q 012517 405 SGEDAYRKI----RAGATLVQLYTAFAY 428 (462)
Q Consensus 405 s~~dA~e~i----~aGAd~Vqv~Tali~ 428 (462)
+-+++.+.. ++|||.|++.+...+
T Consensus 73 ~t~~ai~la~~A~~~Gadavlv~~P~y~ 100 (283)
T 2pcq_A 73 TLPQAEGALLEAKAAGAMALLATPPRYY 100 (283)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCcCC
Confidence 555555544 479999999999854
No 476
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=84.23 E-value=14 Score=29.82 Aligned_cols=61 Identities=15% Similarity=0.053 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHc
Q 012517 380 SNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERD 448 (462)
Q Consensus 380 al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~ 448 (462)
..++++++++..+ .+|||...+-.+.+...+.+++||+.+ +. -|.-..++.+.+..+++..
T Consensus 66 g~~~~~~l~~~~~-~~~ii~~s~~~~~~~~~~~~~~g~~~~------l~-kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 66 GLEMLDRIKAGGA-KPYVIVISAFSEMKYFIKAIELGVHLF------LP-KPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp HHHHHHHHHHTTC-CCEEEECCCCCCHHHHHHHHHHCCSEE------CC-SSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCcEEEEecCcChHHHHHHHhCCccee------Ec-CCCCHHHHHHHHHHHHHHH
Confidence 3578888888764 799999999999999999999998864 33 3777777777777776543
No 477
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=84.21 E-value=12 Score=36.26 Aligned_cols=78 Identities=12% Similarity=0.147 Sum_probs=56.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEec----
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCG---- 401 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~G---- 401 (462)
.+.+++.++++.+.+.|+|.|.+.+|. |+. . .....+.++.+++.++ ++||-.=|
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~-----------------G~~-~--P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~ 214 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTI-----------------GVG-T--AGATRRLIEAVASEVP-RERLAGHFHDTY 214 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESS-----------------SCC-C--HHHHHHHHHHHTTTSC-GGGEEEEEBCTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC-----------------CCc-C--HHHHHHHHHHHHHhCC-CCeEEEEeCCCc
Confidence 445788999999999999999998764 111 1 1235678888988885 57776554
Q ss_pred CCCCHHHHHHHHHhCCCEEEEchh
Q 012517 402 GISSGEDAYRKIRAGATLVQLYTA 425 (462)
Q Consensus 402 GI~s~~dA~e~i~aGAd~Vqv~Ta 425 (462)
|.. -..+++.+++||+.|...-.
T Consensus 215 Gla-~An~laAv~aGa~~vd~tv~ 237 (302)
T 2ftp_A 215 GQA-LANIYASLLEGIAVFDSSVA 237 (302)
T ss_dssp SCH-HHHHHHHHHTTCCEEEEBGG
T ss_pred cHH-HHHHHHHHHhCCCEEEeccc
Confidence 333 45688899999999987654
No 478
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=84.13 E-value=1.3 Score=46.47 Aligned_cols=72 Identities=21% Similarity=0.222 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+..+.++.+.+.|++.+++.-+. |.+ ....+.++.+++..++++||| +|+|.+.++|
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~~-----------------g~~-----~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a 298 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSSD-----------------GFS-----EWQKITIGWIREKYGDKVKVG-AGNIVDGEGF 298 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCSC-----------------CCS-----HHHHHHHHHHHHHHGGGSCEE-EEEECSHHHH
T ss_pred hHHHHHHHHHhhhccceEEeccc-----------------Ccc-----cchhhHHHHHHHhCCCCceEe-eccccCHHHH
Confidence 45566888888999987763210 110 114566788888764227777 7999999999
Q ss_pred HHHHHhCCCEEEEch
Q 012517 410 YRKIRAGATLVQLYT 424 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~T 424 (462)
.+.+++||+++.++.
T Consensus 299 ~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 299 RYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHTCSEEEECS
T ss_pred HHHHHhCCCeEEecc
Confidence 999999999998843
No 479
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=83.86 E-value=2.1 Score=43.03 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=52.7
Q ss_pred CChhhHHHH-------HHHHHHcCCcEEEEecCCccCC----CCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 326 LSKEDLEDI-------AAVAVALRLDGLIISNTTISRP----DPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 326 l~~~~~~~i-------a~~~~~~GvdgIivsNTt~~r~----~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
++.+||.++ |+.+.++|+|||-+...--... .... +.-..++|| |=..-....+++|+.+++.++.+
T Consensus 148 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGG-slenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 148 MTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHS-NKRTDAYGG-SFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSS-SHHHHHHHHHHHHHHHHTTSCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCc-CCCCcccCc-CHHHHHHHHHHHHHHHHHHcCCC
Confidence 565555544 4456789999998764310000 0000 011124555 10001123578899999999777
Q ss_pred ccEEE--e------cCCCCHHHHHHH----HHhCCCEEEEchh
Q 012517 395 IPLIG--C------GGISSGEDAYRK----IRAGATLVQLYTA 425 (462)
Q Consensus 395 ipIIg--~------GGI~s~~dA~e~----i~aGAd~Vqv~Ta 425 (462)
+||.. + ||-.+.+|+.++ -++|+|.+.+..+
T Consensus 226 ~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g 268 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVG 268 (363)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 77654 1 121234553333 3579999998764
No 480
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=83.69 E-value=16 Score=35.46 Aligned_cols=148 Identities=14% Similarity=0.044 Sum_probs=82.8
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcccCcEEEEecc-CCCCCCccc--ccCchHHHHHHHHHHHHHHhhccCCCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQYADYLVINVS-SPNTPGLRM--LQGRKQLKDLVKKVQAARDEMQWGEEGPP 316 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~~aD~leiNvS-sPnt~glr~--lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 316 (462)
||.+.+-- .. +++.+..-+..+.++ .++++.|-=. .|..+|... +-..+...+-+++++++. ...+.
T Consensus 84 PviaD~d~Gyg-~~~~~~~~v~~l~~a--Ga~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~------~~~~~ 154 (287)
T 3b8i_A 84 PVIADADHGYG-NALNVMRTVVELERA--GIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEAR------VDPAL 154 (287)
T ss_dssp CEEEECTTCSS-SHHHHHHHHHHHHHH--TCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHC------CSTTS
T ss_pred CEEEECCCCCC-CHHHHHHHHHHHHHh--CCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcC------CCCCc
Confidence 56666621 12 455333333333333 3888777422 243333322 333344444444444442 11234
Q ss_pred CEEEEecCCCC--hhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 317 PLLVKIAPDLS--KEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 317 Pv~vKispdl~--~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
-|..|.-. .. .++..+=+++..++|+|+|.+-.. .+.+.++++.+.+ +
T Consensus 155 ~i~aRtda-a~~gl~~ai~Ra~ay~eAGAd~i~~e~~---------------------------~~~~~~~~i~~~~--~ 204 (287)
T 3b8i_A 155 TIIARTNA-ELIDVDAVIQRTLAYQEAGADGICLVGV---------------------------RDFAHLEAIAEHL--H 204 (287)
T ss_dssp EEEEEEET-TTSCHHHHHHHHHHHHHTTCSEEEEECC---------------------------CSHHHHHHHHTTC--C
T ss_pred EEEEechh-hhcCHHHHHHHHHHHHHcCCCEEEecCC---------------------------CCHHHHHHHHHhC--C
Confidence 45555533 21 256777788889999999987521 1346788899988 5
Q ss_pred ccEEEe-cCCCCHHHHHHHHHhCCCEEEEchhhh
Q 012517 395 IPLIGC-GGISSGEDAYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 395 ipIIg~-GGI~s~~dA~e~i~aGAd~Vqv~Tali 427 (462)
+|++-+ ||-...-+..++-+.|...|-++..++
T Consensus 205 ~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 205 IPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAY 238 (287)
T ss_dssp SCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHH
T ss_pred CCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHH
Confidence 888833 343333345677789999887776664
No 481
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=83.61 E-value=11 Score=36.06 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=59.6
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLL 319 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~ 319 (462)
.++|.|... |.+ +....++++.. .+|.+|+=+-. +.+..+.+.+.+++..+++.. .+.|++
T Consensus 21 kIcvpl~~~--t~~---e~l~~a~~~~~~~aD~vElR~D~-----l~~~~~~~~v~~~l~~lr~~~--------~~lPiI 82 (258)
T 4h3d_A 21 KICVPIIGK--NKK---DIIKEAKELKDACLDIIEWRVDF-----FENVENIKEVKEVLYELRSYI--------HDIPLL 82 (258)
T ss_dssp EEEEEECCS--SHH---HHHHHHHHHTTSSCSEEEEEGGG-----CTTTTCHHHHHHHHHHHHHHC--------TTSCEE
T ss_pred EEEEEeCCC--CHH---HHHHHHHHHhhcCCCEEEEeecc-----ccccCCHHHHHHHHHHHHHhc--------CCCCEE
Confidence 488888652 555 66666666655 59999986532 122234456677777776542 368999
Q ss_pred EEecCC-------CChhhHHHHHHHHHHcC-CcEEEEe
Q 012517 320 VKIAPD-------LSKEDLEDIAAVAVALR-LDGLIIS 349 (462)
Q Consensus 320 vKispd-------l~~~~~~~ia~~~~~~G-vdgIivs 349 (462)
+=+++. .++++-.++.+.+.+.| +|.|.+=
T Consensus 83 ~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 83 FTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp EECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 988753 44556667777777766 8887664
No 482
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=83.23 E-value=9.7 Score=31.19 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=34.2
Q ss_pred hHHHHHHHHH--hcCCCccEEEecCCCCHHHHHHHHHhCCCEE
Q 012517 380 SNNILKEMYL--LTRGKIPLIGCGGISSGEDAYRKIRAGATLV 420 (462)
Q Consensus 380 al~~v~~i~~--~~~~~ipIIg~GGI~s~~dA~e~i~aGAd~V 420 (462)
.+++++++++ .. ..+|||...+-.+.+.+.+.+++||+.+
T Consensus 66 g~~~~~~lr~~~~~-~~~pii~~s~~~~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 66 GFEVMSAVRKPGAN-QHTPIVILTDNVSDDRAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHHHSSSTT-TTCCEEEEETTCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhcccc-cCCCEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 3678888887 33 3799999999999999999999999875
No 483
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=83.21 E-value=36 Score=33.31 Aligned_cols=165 Identities=11% Similarity=-0.012 Sum_probs=84.6
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcc-cCcEEEEec-cCCCCCCcc---cccCchHHHHHHHHHHHHHHhhccCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQ-YADYLVINV-SSPNTPGLR---MLQGRKQLKDLVKKVQAARDEMQWGEEG 314 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~-~aD~leiNv-SsPnt~glr---~lq~~~~l~~ll~aV~~~~~~~~~~~~~ 314 (462)
||.+.+-- .. +++ ...+.++++.+ .++++.|-= ..|..+|+. .+-..+...+-+++.++++++.
T Consensus 90 PviaD~d~Gyg-~~~---~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~------ 159 (307)
T 3lye_A 90 PLIADMDTGYG-GPI---MVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRL------ 159 (307)
T ss_dssp CEEEECTTCSS-SHH---HHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHT------
T ss_pred cEEEECCCCCC-CHH---HHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhc------
Confidence 57677621 11 344 33344444443 378777631 123333332 2333344444455555554332
Q ss_pred CCCEEEEecCCC----ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHh
Q 012517 315 PPPLLVKIAPDL----SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLL 390 (462)
Q Consensus 315 ~~Pv~vKispdl----~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~ 390 (462)
+.+++|--+.|. ..++..+=+++..++|+|+|.+-.. .+.+.++++.+.
T Consensus 160 ~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~---------------------------~~~~~~~~i~~~ 212 (307)
T 3lye_A 160 RSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGF---------------------------RSKEQAAAAVAA 212 (307)
T ss_dssp TCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC---------------------------SCHHHHHHHHHH
T ss_pred CCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC---------------------------CCHHHHHHHHHH
Confidence 334444444442 2345666677778999999976421 134667788887
Q ss_pred cCCCccEEE---ecCCCCHHHHHHHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHH
Q 012517 391 TRGKIPLIG---CGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLE 446 (462)
Q Consensus 391 ~~~~ipIIg---~GGI~s~~dA~e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~ 446 (462)
++ .+|+.. .||-+..-.+.++-+.|.+.|.....++. ....-+++.+.++++
T Consensus 213 ~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~r---aa~~a~~~~~~~l~~ 267 (307)
T 3lye_A 213 LA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLA---PAYAAIRETLVRLRD 267 (307)
T ss_dssp HT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHH---HHHHHHHHHHHHHHH
T ss_pred cc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHH---HHHHHHHHHHHHHHH
Confidence 74 367654 34432222355667789999976665543 123344444444443
No 484
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.19 E-value=34 Score=33.02 Aligned_cols=79 Identities=13% Similarity=0.016 Sum_probs=52.3
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCC--CccEEEecCC
Q 012517 326 LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRG--KIPLIGCGGI 403 (462)
Q Consensus 326 l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~--~ipIIg~GGI 403 (462)
.+.+.+.++++.+.+.|++-|.+..|.- .. ......++++.+++.+++ ++||-.=.==
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G----------------~~----~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hn 206 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVG----------------YT----NPTEFGQLFQDLRREIKQFDDIIFASHCHD 206 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSS----------------CC----CHHHHHHHHHHHHHHCTTGGGSEEEEECBC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC----------------CC----CHHHHHHHHHHHHHhcCCccCceEEEEeCC
Confidence 4556789999999999999999887751 11 112345788888888753 2444332211
Q ss_pred C---CHHHHHHHHHhCCCEEEEch
Q 012517 404 S---SGEDAYRKIRAGATLVQLYT 424 (462)
Q Consensus 404 ~---s~~dA~e~i~aGAd~Vqv~T 424 (462)
+ --.-++..+++||+.|...-
T Consensus 207 d~Gla~AN~laA~~aGa~~vd~sv 230 (293)
T 3ewb_X 207 DLGMATANALAAIENGARRVEGTI 230 (293)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred CcChHHHHHHHHHHhCCCEEEeec
Confidence 1 24467788899999887653
No 485
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=82.94 E-value=21 Score=35.06 Aligned_cols=87 Identities=23% Similarity=0.221 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCcEEEEecCCcc------CCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEe-----
Q 012517 332 EDIAAVAVALRLDGLIISNTTIS------RPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGC----- 400 (462)
Q Consensus 332 ~~ia~~~~~~GvdgIivsNTt~~------r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~----- 400 (462)
.+-|+.+.++|+|||-+.-.--. .+ .. +....++|| |=..-....+++++.+++.+ ++||..=
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp--~~-n~R~d~yGG-slenr~r~~~eiv~avr~~v--~~pv~vris~~~ 220 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSP--LS-NHRTDEYGG-SPENRYRFLREIIDEVKQVW--DGPLFVRVSASD 220 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCT--TT-CCCCSTTSS-SHHHHHHHHHHHHHHHHHHC--CSCEEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCC--Cc-CCcCcccCc-chhhhHHHHHHHHHHHHHHc--CCcEEEEecCcc
Confidence 44456667899999987532100 00 00 001124555 10001123578899999988 5676532
Q ss_pred ---cCCCCHHHHHHHH----HhCCCEEEEchh
Q 012517 401 ---GGISSGEDAYRKI----RAGATLVQLYTA 425 (462)
Q Consensus 401 ---GGI~s~~dA~e~i----~aGAd~Vqv~Ta 425 (462)
||. +.+++.++. ++|+|.+.+..+
T Consensus 221 ~~~~g~-~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 221 YTDKGL-DIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp CSTTSC-CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCCC-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 244 455544333 589999998754
No 486
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=82.85 E-value=22 Score=36.02 Aligned_cols=143 Identities=13% Similarity=0.166 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCC----CCEEEEecCC
Q 012517 250 KTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGP----PPLLVKIAPD 325 (462)
Q Consensus 250 k~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~----~Pv~vKispd 325 (462)
..|++ ++.+.-+.++ +|.+..==-|+..+--+. ...+.+..-+++.++..+... +..+ ..++-=+-..
T Consensus 134 ~ltpe---~~~~iq~~lg--~DI~m~lDe~~~~~~~~~-~~~~sv~rT~rW~~r~~~~~~--~~~~~~~~~~lfgiVQGg 205 (386)
T 3bld_A 134 MLSPE---RSIEIQHLLG--SDIVMAFDECTPYPATPS-RAASSMERSMRWAKRSRDAFD--SRKEQAENAALFGIQQGS 205 (386)
T ss_dssp -CCHH---HHHHHHHHHT--CSEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHH--TSHHHHHHCEEEEEECCT
T ss_pred ecCHH---HHHHHHHHhC--CCEEEecCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhh--ccCcccccccEEEEEcCC
Confidence 35777 6777777777 887643112333221111 011223333333332222110 0001 2344434443
Q ss_pred CChhhHH-HHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCC
Q 012517 326 LSKEDLE-DIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGIS 404 (462)
Q Consensus 326 l~~~~~~-~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~ 404 (462)
... ++. +-++.+.+.+++|+.+.+ +|..--.+...++|..+...++.+.|.... ||.
T Consensus 206 ~~~-dLR~~sa~~l~~~~~~GyaIGG--------------------lsvge~~~~~~~~l~~~~~~LP~~kPRylm-Gvg 263 (386)
T 3bld_A 206 VFE-NLRQQSADALAEIGFDGYAVGG--------------------LAGGEGQDEMFRVLDFSVPMLPDDKPHYLM-GVG 263 (386)
T ss_dssp TCH-HHHHHHHHHHHHHCCSEEEECS--------------------CSSSSCHHHHHHHHHHHGGGSCTTSCEEET-TCC
T ss_pred CCH-HHHHHHHHHHHhcCCCCeeEcC--------------------cccCCCHHHHHHHHHHHHhhCCCCCcEEEe-CCC
Confidence 333 443 556777888999987653 332111344567888888889888998765 778
Q ss_pred CHHHHHHHHHhCCCEEEE
Q 012517 405 SGEDAYRKIRAGATLVQL 422 (462)
Q Consensus 405 s~~dA~e~i~aGAd~Vqv 422 (462)
+|+|..+.+..|+|+.-.
T Consensus 264 ~P~~il~~V~~GvDmFDc 281 (386)
T 3bld_A 264 KPDDIVGAVERGIDMFDC 281 (386)
T ss_dssp CHHHHHHHHTTTCCEEC-
T ss_pred CHHHHHHHHHcCCCEEeC
Confidence 999999999999998643
No 487
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=82.71 E-value=7.6 Score=36.68 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=57.6
Q ss_pred CEEEEe-cCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcc------cccCCCCCCcCccchHHHHHHHHH
Q 012517 317 PLLVKI-APDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVA------KETGGLSGKPLLSLSNNILKEMYL 389 (462)
Q Consensus 317 Pv~vKi-spdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~------~~~GGlSG~~l~~~al~~v~~i~~ 389 (462)
.+..=+ +.|.+.++..++++.+.+.|+|.|.+..... +++...+.. ...+|++ .....+.++++++
T Consensus 19 ~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~---dp~~dg~~i~~a~~~al~~g~~----~~~~~~~i~~ir~ 91 (262)
T 1rd5_A 19 AFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCS---DPYIDGPIIQASVARALASGTT----MDAVLEMLREVTP 91 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCS---CCTTSCHHHHHHHHHHHTTTCC----HHHHHHHHHHHGG
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC---CcccCCHHHHHHHHHHHHcCCC----HHHHHHHHHHHHh
Confidence 343333 4455557889999999999999999865432 111110100 0123321 1234678888888
Q ss_pred hcCCCccEEEecCCCCHHH---HHHHHHhCCCEEEEc
Q 012517 390 LTRGKIPLIGCGGISSGED---AYRKIRAGATLVQLY 423 (462)
Q Consensus 390 ~~~~~ipIIg~GGI~s~~d---A~e~i~aGAd~Vqv~ 423 (462)
.+ ++||+..+ -.++.. ..++.++|||.|-+.
T Consensus 92 ~~--~~Pv~~m~-~~~~~~~~~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 92 EL--SCPVVLLS-YYKPIMFRSLAKMKEAGVHGLIVP 125 (262)
T ss_dssp GC--SSCEEEEC-CSHHHHSCCTHHHHHTTCCEEECT
T ss_pred cC--CCCEEEEe-cCcHHHHHHHHHHHHcCCCEEEEc
Confidence 86 79988764 122221 224788999988764
No 488
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=82.50 E-value=2.6 Score=40.36 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHH-HHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCC----CC
Q 012517 253 EDAAADYVQGVH-TLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPD----LS 327 (462)
Q Consensus 253 ~~~~~dy~~~~~-~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispd----l~ 327 (462)
+...+.|++.+- .+. +|++.||-+. |. +.++...+.. +..+-|++..|.. +.
T Consensus 89 ~nTv~~~a~~~~~~lg--~d~vTvh~~~----G~----------~~l~~~~~~~-------~~gv~vL~~tS~~~~~~~q 145 (255)
T 3qw3_A 89 ADTADAYATSAFKHLN--AHAITASPYM----GS----------DSLQPFMRYP-------DKAVFVLCKTSNKGSNDLQ 145 (255)
T ss_dssp HHHHHHHHHHHHTTSC--CSEEEECCTT----CH----------HHHHHHHTCT-------TSEEEEEEECCSGGGGTTT
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEcccC----CH----------HHHHHHHHhh-------CCceEEEEeCCCccHHHHH
Confidence 444556766653 333 9999997532 21 2233332211 2235666677643 21
Q ss_pred h-----hh-HHHHHHHHH----HcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccE
Q 012517 328 K-----ED-LEDIAAVAV----ALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPL 397 (462)
Q Consensus 328 ~-----~~-~~~ia~~~~----~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipI 397 (462)
+ .. .+.+++.+. +.|.+|++++-|. -+-++.+|+.++. .++
T Consensus 146 ~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at~----------------------------~~e~~~ir~~~~~-~~~ 196 (255)
T 3qw3_A 146 CLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATD----------------------------PVALARVRARAPT-LWF 196 (255)
T ss_dssp TSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSSC----------------------------HHHHHHHHHHCSS-CCE
T ss_pred hcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCCC----------------------------HHHHHHHHHHCCC-CeE
Confidence 1 00 234444444 4899999987552 1235678888764 455
Q ss_pred EEecCCC-CHHHHHHHHHhCCC------EEEEchhhhhcCCC---hHHHHHHHHHHH
Q 012517 398 IGCGGIS-SGEDAYRKIRAGAT------LVQLYTAFAYGGPA---LIPQIKAELAEC 444 (462)
Q Consensus 398 Ig~GGI~-s~~dA~e~i~aGAd------~Vqv~Tali~~GP~---~i~~i~~~L~~~ 444 (462)
+ +=||. .+.+..+.+++|+| ++-++|++.+ -++ ..++|++++.+.
T Consensus 197 l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~-A~dp~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 197 L-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLAR-AADPRAAAKELCEEINAI 251 (255)
T ss_dssp E-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHT-SSCHHHHHHHHHHHHHHH
T ss_pred E-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcC-CCCHHHHHHHHHHHHHHH
Confidence 4 55554 12356667779999 5999999976 344 344555555443
No 489
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=82.41 E-value=38 Score=32.93 Aligned_cols=155 Identities=9% Similarity=0.031 Sum_probs=80.8
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcc-cCcEEEEecc-CCCCCCcccc--cCchHHHHHHHHHHHHHHhhccCCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQ-YADYLVINVS-SPNTPGLRML--QGRKQLKDLVKKVQAARDEMQWGEEGP 315 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~-~aD~leiNvS-sPnt~glr~l--q~~~~l~~ll~aV~~~~~~~~~~~~~~ 315 (462)
||.+.+-- .. +++ ...+.++++.+ .++++.|-=. .|-.+|+... +.-....+.+..|+.+++.. ...+
T Consensus 81 PviaD~d~Gyg-~~~---~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~---~~~~ 153 (295)
T 1s2w_A 81 PILLDADTGYG-NFN---NARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQ---TDPD 153 (295)
T ss_dssp CEEEECCSSCS-SHH---HHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHC---SSTT
T ss_pred CEEecCCCCCC-CHH---HHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhc---ccCC
Confidence 56676621 11 333 34444444443 3788776422 1333333221 11122334444444443321 1223
Q ss_pred CCEEEEecCCC---ChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC
Q 012517 316 PPLLVKIAPDL---SKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 316 ~Pv~vKispdl---~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~ 392 (462)
.-|..|.-..+ ..++..+=+++..++|+|+|.+-... .+.+.++++.+.++
T Consensus 154 ~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~--------------------------~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 154 FCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK--------------------------ADPSDIEAFMKAWN 207 (295)
T ss_dssp CEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS--------------------------SSSHHHHHHHHHHT
T ss_pred cEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC--------------------------CCHHHHHHHHHHcC
Confidence 44445553321 13677778888999999999874211 02356678888875
Q ss_pred CCccEEEecCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 393 GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 393 ~~ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
+.+|+|.+-+-...-++.++-+.|...|-+..+++.
T Consensus 208 ~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~r 243 (295)
T 1s2w_A 208 NQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLR 243 (295)
T ss_dssp TCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHH
T ss_pred CCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHH
Confidence 559999873311111366777899999988877653
No 490
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=82.37 E-value=5 Score=41.66 Aligned_cols=98 Identities=9% Similarity=0.029 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCC
Q 012517 295 KDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGK 374 (462)
Q Consensus 295 ~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~ 374 (462)
.+.+++|+++. +.+.+|+|-....++.++..++++.+.+.++..|- .
T Consensus 203 i~rv~avRea~-------G~d~~L~vDaN~~wt~~~Ai~~~~~Le~~~l~~iE-------E------------------- 249 (455)
T 3fxg_A 203 VEFLRKHREAV-------GPDFPIMVDCYMSLNVSYTIELVKACLDLNINWWE-------E------------------- 249 (455)
T ss_dssp HHHHHHHHHHH-------CSSSCEEEECTTCCCHHHHHHHHHHTGGGCCSEEE-------C-------------------
T ss_pred HHHHHHHHHHh-------CCCCeEEEeCCCCCCHHHHHHHHHhcccCCcceec-------C-------------------
Confidence 34555665554 45789999888888888888999999988776541 1
Q ss_pred cCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHHHHHHhC-CCEEEEchhh
Q 012517 375 PLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAG-ATLVQLYTAF 426 (462)
Q Consensus 375 ~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~e~i~aG-Ad~Vqv~Tal 426 (462)
|+.+...+..+++++.++ .+||.+-=-+.+..|+.++++.| +|.||+--..
T Consensus 250 Pl~~dd~~~la~L~~~~~-~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~ 301 (455)
T 3fxg_A 250 CLSPDDTDGFALIKRAHP-TVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMW 301 (455)
T ss_dssp CSCGGGGGGHHHHHHHCT-TSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTT
T ss_pred CCCcchHHHHHHHHHhCC-CCeEECCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 122223455677887763 37777776799999999999877 8999886655
No 491
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=82.36 E-value=9.9 Score=33.45 Aligned_cols=68 Identities=21% Similarity=0.172 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
.+++++.+.+.++|.|.+|-+.... .+...++++.+++.-..+++|+..| .-..+|..
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~~---------------------~~~~~~~i~~L~~~g~~~i~v~vGG-~~~~~~~~ 115 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGAH---------------------LHLMKRLMAKLRELGADDIPVVLGG-TIPIPDLE 115 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCH---------------------HHHHHHHHHHHHHTTCTTSCEEEEE-CCCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeechhh---------------------HHHHHHHHHHHHhcCCCCCEEEEeC-CCchhcHH
Confidence 3567788888889988887543110 1234567777777633357776555 44556665
Q ss_pred HHHHhCCCEE
Q 012517 411 RKIRAGATLV 420 (462)
Q Consensus 411 e~i~aGAd~V 420 (462)
.+-+.|+|.+
T Consensus 116 ~l~~~G~d~v 125 (161)
T 2yxb_A 116 PLRSLGIREI 125 (161)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHCCCcEE
Confidence 5667999965
No 492
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=82.32 E-value=16 Score=30.25 Aligned_cols=88 Identities=9% Similarity=0.074 Sum_probs=62.5
Q ss_pred HHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHHH
Q 012517 331 LEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDAY 410 (462)
Q Consensus 331 ~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA~ 410 (462)
..+..+.+.+...|-|++.-... +.+ ..++++++++..+ .+|||...+-.+.+.+.
T Consensus 50 ~~~a~~~l~~~~~dlii~d~~l~----------------~~~-------g~~~~~~l~~~~~-~~~ii~~s~~~~~~~~~ 105 (152)
T 3eul_A 50 GAAALELIKAHLPDVALLDYRMP----------------GMD-------GAQVAAAVRSYEL-PTRVLLISAHDEPAIVY 105 (152)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCS----------------SSC-------HHHHHHHHHHTTC-SCEEEEEESCCCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCC----------------CCC-------HHHHHHHHHhcCC-CCeEEEEEccCCHHHHH
Confidence 34555666677788877653221 111 3578888888754 79999999999999999
Q ss_pred HHHHhCCCEEEEchhhhhcCCChHHHHHHHHHHHHHHcC
Q 012517 411 RKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLERDG 449 (462)
Q Consensus 411 e~i~aGAd~Vqv~Tali~~GP~~i~~i~~~L~~~l~~~G 449 (462)
+.+++||+.+ +. -|.-..++.+.+...+...-
T Consensus 106 ~~~~~g~~~~------l~-Kp~~~~~l~~~i~~~~~~~~ 137 (152)
T 3eul_A 106 QALQQGAAGF------LL-KDSTRTEIVKAVLDCAKGRD 137 (152)
T ss_dssp HHHHTTCSEE------EE-TTCCHHHHHHHHHHHHHCC-
T ss_pred HHHHcCCCEE------Ee-cCCCHHHHHHHHHHHHcCCe
Confidence 9999998865 23 36667788887777776543
No 493
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=82.18 E-value=44 Score=33.69 Aligned_cols=162 Identities=17% Similarity=0.192 Sum_probs=96.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEE
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLV 320 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~v 320 (462)
.+|+||--++.+.++..+|++.+.+.+ +..|=..+-+|.... -+-.+.+.++++..++ + ..-|++
T Consensus 4 mlGiSvY~~~~~~~~~~~yi~~a~~~G--f~~IFTSL~~~e~~~---~~~~~~~~~l~~~a~~----~------g~~vi~ 68 (372)
T 2p0o_A 4 MYGISVFLGEEITNDTIIYIKKMKALG--FDGIFTSLHIPEDDT---SLYRQRLTDLGAIAKA----E------KMKIMV 68 (372)
T ss_dssp EEEEECCTTSCCCHHHHHHHHHHHHTT--CCEEEEEECCC--------CHHHHHHHHHHHHHH----H------TCEEEE
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHCC--CCEEEccCCccCCCh---HHHHHHHHHHHHHHHH----C------CCEEEE
Confidence 589999665555566668988888877 888877777764321 0111344455554443 2 688999
Q ss_pred EecCC------CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCC
Q 012517 321 KIAPD------LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGK 394 (462)
Q Consensus 321 Kispd------l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ 394 (462)
-|+|. .+.+++ +.+.+.|++||=+ | -|+++ +.++++.+ +
T Consensus 69 DIsp~~l~~Lg~s~~dl----~~~~~lGi~glRL--------D-----------~Gf~~--------~eia~ls~----n 113 (372)
T 2p0o_A 69 DISGEALKRAGFSFDEL----EPLIELGVTGLRM--------D-----------YGITI--------EQMAHASH----K 113 (372)
T ss_dssp EECHHHHHTTTCBTTBC----HHHHHHTCCEEEE--------C-----------SSCCH--------HHHHHHHT----T
T ss_pred ECCHHHHHHcCCCHHHH----HHHHHcCCCEEEE--------c-----------CCCCH--------HHHHHHhc----C
Confidence 99985 222333 3456679999833 2 24432 33444444 3
Q ss_pred ccEEEecCCCCHHHHHHHHHhCCCEEEEchhhh-h--cCCChHHHHHHHHHHHHHHcCCCC
Q 012517 395 IPLIGCGGISSGEDAYRKIRAGATLVQLYTAFA-Y--GGPALIPQIKAELAECLERDGFKS 452 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~aGAd~Vqv~Tali-~--~GP~~i~~i~~~L~~~l~~~G~~s 452 (462)
+.|.-+--.-+.++..+.+..|++.=++...-= | ..-++-.+.-.+..+++++.|+++
T Consensus 114 lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t 174 (372)
T 2p0o_A 114 IDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQV 174 (372)
T ss_dssp SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcE
Confidence 677777777789999999999999554422111 1 011233344444556777777654
No 494
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=82.08 E-value=9.4 Score=37.17 Aligned_cols=80 Identities=24% Similarity=0.272 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCH-HH
Q 012517 330 DLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSG-ED 408 (462)
Q Consensus 330 ~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~-~d 408 (462)
+.++..+.+++.|+|.+-++-.| ..|-|.|.| .+..+.++++++.+ ++|++-=||=..+ ++
T Consensus 156 ~Peea~~Fv~~TgvD~LAvaiGt--------------~HG~Y~~~p--~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~ 217 (286)
T 1gvf_A 156 DPQEAKRFVELTGVDSLAVAIGT--------------AHGLYSKTP--KIDFQRLAEIREVV--DVPLVLHGASDVPDEF 217 (286)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSC--------------CSSCCSSCC--CCCHHHHHHHHHHC--CSCEEECCCTTCCHHH
T ss_pred CHHHHHHHHHHHCCCEEEeecCc--------------cccCcCCCC--ccCHHHHHHHHHhc--CCCEEEECCCCCCHHH
Confidence 55677777788999999887554 234455543 25678899999999 6999988876554 55
Q ss_pred HHHHHHhCCCEEEEchhhh
Q 012517 409 AYRKIRAGATLVQLYTAFA 427 (462)
Q Consensus 409 A~e~i~aGAd~Vqv~Tali 427 (462)
..++++.|..=|-++|-+.
T Consensus 218 i~~ai~~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 218 VRRTIELGVTKVNVATELK 236 (286)
T ss_dssp HHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHCCCeEEEEChHHH
Confidence 7888999999999999884
No 495
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=81.98 E-value=13 Score=35.75 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=55.4
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|+|.++=|+ |.-.....+.-.++++.+++.. .. |++=+..+ +-++..++++
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~--------~g--vi~Gvg~~-~t~~ai~la~ 84 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGTT----GLGPALSLQEKMELTDAATSAA--------RR--VIVQVASL-NADEAIALAK 84 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTT----TTGGGSCHHHHHHHHHHHHHHC--------SS--EEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHh--------CC--EEEeeCCC-CHHHHHHHHH
Confidence 44555555443 59999987543 3333334455667777777653 12 88888764 3457789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+++.|+|++.+....+.+
T Consensus 85 ~A~~~Gadavlv~~P~y~~ 103 (286)
T 2r91_A 85 YAESRGAEAVASLPPYYFP 103 (286)
T ss_dssp HHHHTTCSEEEECCSCSST
T ss_pred HHHhcCCCEEEEcCCcCCC
Confidence 9999999999988655434
No 496
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=81.76 E-value=7.8 Score=39.94 Aligned_cols=121 Identities=13% Similarity=0.127 Sum_probs=78.1
Q ss_pred CcccccCCCCchhHHHHHHHHHHhhccCcccccccCCCCCCCcccCCCCCCCceEEEEecCC--CCCHHHHHHHHHHHHH
Q 012517 188 GAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSRTSSSPNDEVKAGGKAGPGILGVNIGKN--KTSEDAAADYVQGVHT 265 (462)
Q Consensus 188 ~a~iN~~G~nn~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lgvnig~n--k~t~~~~~dy~~~~~~ 265 (462)
.+++..+.=+.-|++-+-+.|... ..|+...+-|. ..+++ +|.+.+.+
T Consensus 136 ~~~~~~f~GP~~GI~g~R~~lg~~---------------------------~RPl~gtiiKPklGLs~~---~~a~~~ye 185 (432)
T 3nwr_A 136 ASYRARFELPRHGVAGTRALTDVK---------------------------DRPMIGTIIKPNVGLSAA---ETAALVRE 185 (432)
T ss_dssp HHHHTTSBCCSSHHHHHHHHHTCC---------------------------SSCEEEEECSSSSCCCHH---HHHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHHhCCC---------------------------CCceEEEeeccccCCCHH---HHHHHHHH
Confidence 457777766778888776666422 12555566565 34677 88888887
Q ss_pred Hcc-cCcEEEE--eccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHHHHHHcC
Q 012517 266 LSQ-YADYLVI--NVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAVALR 342 (462)
Q Consensus 266 l~~-~aD~lei--NvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~~~~~~G 342 (462)
+.. ..|++-= |+.++-.. .-++.+..+.++++++.+++ +..+-..+=|+ + +.+++.+-++.+.+.|
T Consensus 186 ~~~GGlDfiKDDE~~~~q~f~-----p~~eRv~~v~eai~rA~~eT----Ge~k~y~~NiT-~-~~~em~~Ra~~a~e~G 254 (432)
T 3nwr_A 186 LCEAGVDFIKDDEVCANPAHA-----PLAERVRAVMSEVRRYRERS----GRPVMVAFNIT-D-DLDAMRRHAELVEREG 254 (432)
T ss_dssp HHHHTCSEEECCTTCSSCTTS-----CHHHHHHHHHHHHHHHHHHH----SCCCEEEEECC-S-CHHHHHHHHHHHHHTT
T ss_pred HHhcCCceeECCCCCCCCCcc-----cHHHHHHHHHHHHHHHHHHh----CCcceEEeecC-C-CHHHHHHHHHHHHHcC
Confidence 776 4799843 34332211 12255666777777776665 34455667777 3 3458888899999999
Q ss_pred CcEEEEe
Q 012517 343 LDGLIIS 349 (462)
Q Consensus 343 vdgIivs 349 (462)
.+.+.+.
T Consensus 255 ~~~~mvd 261 (432)
T 3nwr_A 255 GSCVMAS 261 (432)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 9987654
No 497
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=81.53 E-value=48 Score=33.50 Aligned_cols=143 Identities=14% Similarity=0.088 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHHcccCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhh
Q 012517 251 TSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKED 330 (462)
Q Consensus 251 ~t~~~~~dy~~~~~~l~~~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~ 330 (462)
.|++ ++.+.-+.++ +|.+..==-||..+--+. ...+.+..-+++..+..+... ..+..++-=+-.... .+
T Consensus 133 ltpe---~~~~iQ~~lg--sDI~m~lDe~~~~~~~~~-~~~~sv~rT~rWa~r~~~~~~---~~~~~lfgiVQGg~~-~d 202 (381)
T 2ash_A 133 LNPE---ISMEVQIALG--SDICMVFDHCPVPDADYE-EVKEATERTYRWALRSKKAFK---TENQALFGIVQGGIY-PD 202 (381)
T ss_dssp ECHH---HHHHHHHHHT--CSEEECCCCCCC--CCHH-HHHHHHHHHHHHHHHHHHHCC---CSSCEEEEEECCTTC-HH
T ss_pred cCHH---HHHHHHHHhC--CCEEEECCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhh---CCCCcEEEEEcCCCC-HH
Confidence 3677 6777777777 887643112333221111 111233444444443332211 112233333433333 34
Q ss_pred HH-HHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcCCCccEEEecCCCCHHHH
Q 012517 331 LE-DIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTRGKIPLIGCGGISSGEDA 409 (462)
Q Consensus 331 ~~-~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~~~ipIIg~GGI~s~~dA 409 (462)
+. +-++.+.+.+++|+.+. |+|..--.+...+++..+...++.+.|.... ||.+|+|.
T Consensus 203 LR~~sa~~l~~~~~~GyaIG--------------------GlsvGe~~~~~~~~l~~~~~~LP~~kPRyLm-GvG~P~~i 261 (381)
T 2ash_A 203 LRRESALQLTSIGFDGYAIG--------------------GLSIGEERSLTLEMTEVTVEFLPEDKPRYFM-GGGSPELI 261 (381)
T ss_dssp HHHHHHHHHHTTCCSEEEEC--------------------SCSSSSCHHHHHHHHHHHHTTSCTTSCEEEC-SCCCHHHH
T ss_pred HHHHHHHHHHhcCCceEEec--------------------CcccCCCHHHHHHHHHHHHhhCCCCCcEEEc-CCCCHHHH
Confidence 44 44577888899998654 3332111334567888888899888998765 66899999
Q ss_pred HHHHHhCCCEEEEch
Q 012517 410 YRKIRAGATLVQLYT 424 (462)
Q Consensus 410 ~e~i~aGAd~Vqv~T 424 (462)
.+.+..|+|+.-...
T Consensus 262 l~~V~~GvDmFDcv~ 276 (381)
T 2ash_A 262 LELVDRGVDMFDSVF 276 (381)
T ss_dssp HHHHTTTCCEEEESH
T ss_pred HHHHHcCCCEEeCCh
Confidence 999999999876543
No 498
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=81.50 E-value=3.8 Score=38.03 Aligned_cols=132 Identities=9% Similarity=0.062 Sum_probs=70.7
Q ss_pred eEEEEecCCCCCHHHHHHHHHHHHHHcc-cCcEEEEecc----CCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCC
Q 012517 241 ILGVNIGKNKTSEDAAADYVQGVHTLSQ-YADYLVINVS----SPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGP 315 (462)
Q Consensus 241 ~lgvnig~nk~t~~~~~dy~~~~~~l~~-~aD~leiNvS----sPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~ 315 (462)
.+..+|-.- ... ++.+.++.+.+ .+|++++.+- .||. ..-.++++.+++. .+
T Consensus 8 ~i~psi~a~--d~~---~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~---------~~~~~~~~~lr~~---------~~ 64 (228)
T 1h1y_A 8 KIAPSMLSS--DFA---NLAAEADRMVRLGADWLHMDIMDGHFVPNL---------TIGAPVIQSLRKH---------TK 64 (228)
T ss_dssp EEEEBGGGS--CGG---GHHHHHHHHHHTTCSEEEEEEEBSSSSSCB---------CBCHHHHHHHHTT---------CC
T ss_pred eEEEEeeeC--CHH---HHHHHHHHHHHcCCCEEEEEEecCCcCcch---------hhCHHHHHHHHhh---------cC
Confidence 466676431 122 33444444443 3999988752 2321 1112555566543 23
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccch-HHHHHHHHHhcCCC
Q 012517 316 PPLLVKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLS-NNILKEMYLLTRGK 394 (462)
Q Consensus 316 ~Pv~vKispdl~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~a-l~~v~~i~~~~~~~ 394 (462)
.|+.|-+--+-+ .+.++.+.+.|+|+|+++-... +.. .+.++++++.- .
T Consensus 65 ~~~~v~lmv~d~----~~~i~~~~~agad~v~vH~~~~------------------------~~~~~~~~~~i~~~g--~ 114 (228)
T 1h1y_A 65 AYLDCHLMVTNP----SDYVEPLAKAGASGFTFHIEVS------------------------RDNWQELIQSIKAKG--M 114 (228)
T ss_dssp SEEEEEEESSCG----GGGHHHHHHHTCSEEEEEGGGC------------------------TTTHHHHHHHHHHTT--C
T ss_pred CcEEEEEEecCH----HHHHHHHHHcCCCEEEECCCCc------------------------ccHHHHHHHHHHHcC--C
Confidence 466633322211 2346667779999999874320 012 45667776641 2
Q ss_pred ccEEEecCCCCHHHHHHHHHh---CCCEEEEchhh
Q 012517 395 IPLIGCGGISSGEDAYRKIRA---GATLVQLYTAF 426 (462)
Q Consensus 395 ipIIg~GGI~s~~dA~e~i~a---GAd~Vqv~Tal 426 (462)
..++.+ .-.++.+..+.+.. ++|.|.+.+-.
T Consensus 115 ~igv~~-~p~t~~e~~~~~~~~~~~~d~vl~~sv~ 148 (228)
T 1h1y_A 115 RPGVSL-RPGTPVEEVFPLVEAENPVELVLVMTVE 148 (228)
T ss_dssp EEEEEE-CTTSCGGGGHHHHHSSSCCSEEEEESSC
T ss_pred CEEEEE-eCCCCHHHHHHHHhcCCCCCEEEEEeec
Confidence 333444 44566666666655 99999996543
No 499
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=81.45 E-value=14 Score=36.83 Aligned_cols=83 Identities=19% Similarity=0.129 Sum_probs=54.1
Q ss_pred HHHHHHHHHcc-cCcEEEEeccCCCCCCcccccCchHHHHHHHHHHHHHHhhccCCCCCCCEEEEecCCCChhhHHHHHH
Q 012517 258 DYVQGVHTLSQ-YADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAA 336 (462)
Q Consensus 258 dy~~~~~~l~~-~aD~leiNvSsPnt~glr~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~Pv~vKispdl~~~~~~~ia~ 336 (462)
.+.+.++.+.+ .+|.|.++=++ |.-.....+.-.++++. ... .++||++=+... +-++..++++
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~--~~~--------grvpViaGvg~~-st~eai~la~ 112 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSM----GDWPLLTDEQRMEGVER--LVK--------AGIPVIVGTGAV-NTASAVAHAV 112 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGG----GTGGGSCHHHHHHHHHH--HHH--------TTCCEEEECCCS-SHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccC----cChhhCCHHHHHHHHHH--HhC--------CCCcEEEecCCC-CHHHHHHHHH
Confidence 45555555543 59999998653 22222233444455555 221 378999999764 3357789999
Q ss_pred HHHHcCCcEEEEecCCccC
Q 012517 337 VAVALRLDGLIISNTTISR 355 (462)
Q Consensus 337 ~~~~~GvdgIivsNTt~~r 355 (462)
.+.+.|+|++.+....+.+
T Consensus 113 ~A~~~Gadavlv~~P~y~~ 131 (344)
T 2hmc_A 113 HAQKVGAKGLMVIPRVLSR 131 (344)
T ss_dssp HHHHHTCSEEEECCCCSSS
T ss_pred HHHhcCCCEEEECCCccCC
Confidence 9999999999988655444
No 500
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=81.41 E-value=27 Score=34.16 Aligned_cols=152 Identities=11% Similarity=0.004 Sum_probs=79.7
Q ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHHcc-cCcEEEEecc-CCCCCCcc---cccCchHHHHHHHHHHHHHHhhccCCCC
Q 012517 241 ILGVNIGK-NKTSEDAAADYVQGVHTLSQ-YADYLVINVS-SPNTPGLR---MLQGRKQLKDLVKKVQAARDEMQWGEEG 314 (462)
Q Consensus 241 ~lgvnig~-nk~t~~~~~dy~~~~~~l~~-~aD~leiNvS-sPnt~glr---~lq~~~~l~~ll~aV~~~~~~~~~~~~~ 314 (462)
||.+.+-- .. +++ ...+.++++.+ .++++.|-=. .|..+|+. .+-..+...+-+++.++++++. +.
T Consensus 82 PviaD~d~Gyg-~~~---~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~----~~ 153 (302)
T 3fa4_A 82 PVIADADTGYG-GPI---MVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRI----GS 153 (302)
T ss_dssp CEEEECTTTTS-SHH---HHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHH----TC
T ss_pred CEEEECCCCCC-CHH---HHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhc----CC
Confidence 57777621 11 344 34444554443 3888777321 23322322 2333343444444455444332 22
Q ss_pred CCCEEEEecCC--CChhhHHHHHHHHHHcCCcEEEEecCCccCCCCCCCCCcccccCCCCCCcCccchHHHHHHHHHhcC
Q 012517 315 PPPLLVKIAPD--LSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSKNPVAKETGGLSGKPLLSLSNNILKEMYLLTR 392 (462)
Q Consensus 315 ~~Pv~vKispd--l~~~~~~~ia~~~~~~GvdgIivsNTt~~r~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~i~~~~~ 392 (462)
++-|+.+.-.- ...++..+=+++..++|+|+|.+-.- .+.+.++++.+.++
T Consensus 154 d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~---------------------------~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 154 DIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI---------------------------TSREMARQVIQDLA 206 (302)
T ss_dssp CCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC---------------------------CCHHHHHHHHHHTT
T ss_pred CEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC---------------------------CCHHHHHHHHHHhc
Confidence 34444455321 12345666677778999999976421 13466788888874
Q ss_pred CCccEEEe---cCCCCHHHHHHHHHhCCCEEEEchhhhh
Q 012517 393 GKIPLIGC---GGISSGEDAYRKIRAGATLVQLYTAFAY 428 (462)
Q Consensus 393 ~~ipIIg~---GGI~s~~dA~e~i~aGAd~Vqv~Tali~ 428 (462)
..|+..+ +|-+..-.+.++-+.|.+.|-....++.
T Consensus 207 -~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~r 244 (302)
T 3fa4_A 207 -GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALG 244 (302)
T ss_dssp -TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHH
T ss_pred -CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHH
Confidence 3677553 3332222455666789999988777653
Done!