Query 012519
Match_columns 461
No_of_seqs 442 out of 2359
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 03:29:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2E-39 4.4E-44 290.5 28.5 358 93-461 23-386 (448)
2 COG2814 AraJ Arabinose efflux 100.0 9.7E-38 2.1E-42 284.1 31.6 329 95-460 9-338 (394)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.4E-37 1.4E-41 293.8 34.4 293 95-390 4-309 (412)
4 KOG2532 Permease of the major 100.0 4.1E-36 8.8E-41 285.7 32.7 329 126-460 65-396 (466)
5 PRK09556 uhpT sugar phosphate 100.0 2.1E-36 4.6E-41 295.4 28.9 292 94-390 24-324 (467)
6 PRK03545 putative arabinose tr 100.0 1.5E-35 3.2E-40 283.3 33.7 327 95-460 5-332 (390)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 2.5E-35 5.4E-40 288.3 34.0 362 93-460 13-399 (465)
8 PRK14995 methyl viologen resis 100.0 4.8E-35 1E-39 287.5 35.2 353 96-460 3-390 (495)
9 TIGR00903 2A0129 major facilit 100.0 6.7E-35 1.4E-39 274.1 32.6 317 111-461 3-320 (368)
10 PLN00028 nitrate transmembrane 100.0 4.8E-34 1E-38 278.5 36.9 344 98-461 35-387 (476)
11 PRK10406 alpha-ketoglutarate t 100.0 4E-34 8.7E-39 276.7 35.2 331 96-461 19-376 (432)
12 PRK11663 regulatory protein Uh 100.0 3.9E-34 8.5E-39 276.8 33.5 287 96-389 20-308 (434)
13 TIGR01299 synapt_SV2 synaptic 100.0 1E-33 2.2E-38 282.9 37.2 356 94-461 162-688 (742)
14 TIGR00893 2A0114 d-galactonate 100.0 2.9E-34 6.2E-39 275.5 31.1 347 108-460 3-350 (399)
15 PRK10213 nepI ribonucleoside t 100.0 2.4E-33 5.2E-38 267.5 35.7 322 97-457 18-340 (394)
16 PRK11551 putative 3-hydroxyphe 100.0 2.9E-33 6.2E-38 269.4 34.5 334 95-461 11-348 (406)
17 TIGR00886 2A0108 nitrite extru 100.0 2.1E-33 4.5E-38 266.7 30.9 339 102-461 4-357 (366)
18 TIGR00711 efflux_EmrB drug res 100.0 5.1E-33 1.1E-37 274.1 32.7 349 100-460 3-387 (485)
19 TIGR00891 2A0112 putative sial 100.0 6E-33 1.3E-37 267.3 32.5 355 94-461 7-368 (405)
20 PRK15034 nitrate/nitrite trans 100.0 1.2E-32 2.5E-37 260.2 33.5 322 94-453 29-376 (462)
21 PRK10642 proline/glycine betai 100.0 8.3E-33 1.8E-37 271.4 33.7 339 99-460 16-381 (490)
22 COG2223 NarK Nitrate/nitrite t 100.0 1.4E-33 3.1E-38 253.6 25.6 335 94-461 9-353 (417)
23 TIGR00710 efflux_Bcr_CflA drug 100.0 1.3E-32 2.9E-37 263.0 33.4 326 102-460 8-338 (385)
24 PRK03699 putative transporter; 100.0 2.3E-32 5E-37 261.5 32.5 324 96-456 4-328 (394)
25 PRK11273 glpT sn-glycerol-3-ph 100.0 6E-32 1.3E-36 263.0 35.8 293 93-390 23-319 (452)
26 PRK15402 multidrug efflux syst 100.0 4E-32 8.7E-37 261.2 34.2 335 94-460 8-347 (406)
27 PF07690 MFS_1: Major Facilita 100.0 1.3E-33 2.8E-38 266.5 22.9 332 105-460 2-338 (352)
28 TIGR00890 2A0111 Oxalate/Forma 100.0 8.5E-33 1.8E-37 263.5 28.1 323 105-460 9-334 (377)
29 PRK12307 putative sialic acid 100.0 3.4E-32 7.4E-37 263.6 32.3 342 95-461 14-361 (426)
30 PRK10133 L-fucose transporter; 100.0 1.1E-31 2.4E-36 258.7 35.4 331 97-460 24-385 (438)
31 TIGR00900 2A0121 H+ Antiporter 100.0 7.6E-32 1.7E-36 255.8 33.0 329 104-460 4-340 (365)
32 PRK09705 cynX putative cyanate 100.0 4.1E-32 8.8E-37 259.2 29.8 261 98-390 9-270 (393)
33 TIGR00881 2A0104 phosphoglycer 100.0 8.8E-33 1.9E-37 263.6 24.9 280 106-390 2-282 (379)
34 PRK15403 multidrug efflux syst 100.0 1.4E-31 3.1E-36 256.7 33.2 263 102-387 19-281 (413)
35 PRK09952 shikimate transporter 100.0 2.9E-31 6.3E-36 256.8 35.1 336 94-460 17-382 (438)
36 PRK10091 MFS transport protein 100.0 2.1E-31 4.5E-36 253.8 33.3 262 100-390 4-265 (382)
37 TIGR00892 2A0113 monocarboxyla 100.0 4.4E-32 9.5E-37 263.4 29.0 355 95-460 15-372 (455)
38 PRK15075 citrate-proton sympor 100.0 3.2E-31 7E-36 256.6 33.8 331 97-460 13-370 (434)
39 TIGR00895 2A0115 benzoate tran 100.0 1.2E-31 2.7E-36 257.4 30.7 354 95-460 13-377 (398)
40 KOG1330 Sugar transporter/spin 100.0 9.5E-34 2.1E-38 256.5 13.3 352 94-460 28-388 (493)
41 PRK10504 putative transporter; 100.0 9.1E-31 2E-35 256.8 34.6 349 100-460 11-392 (471)
42 PRK11652 emrD multidrug resist 100.0 2.2E-30 4.9E-35 248.1 34.9 330 97-460 6-337 (394)
43 PRK11102 bicyclomycin/multidru 100.0 6.2E-31 1.3E-35 250.7 30.7 318 114-460 6-325 (377)
44 TIGR00712 glpT glycerol-3-phos 100.0 2.4E-30 5.2E-35 250.8 33.3 289 97-390 25-317 (438)
45 KOG2533 Permease of the major 100.0 6.7E-31 1.4E-35 250.5 28.0 296 89-388 35-337 (495)
46 PRK10473 multidrug efflux syst 100.0 3.9E-30 8.5E-35 246.3 33.6 264 102-390 6-269 (392)
47 PRK11043 putative transporter; 100.0 9.4E-30 2E-34 244.4 34.9 322 104-460 11-334 (401)
48 TIGR00899 2A0120 sugar efflux 100.0 3.8E-30 8.2E-35 245.1 31.8 319 106-460 4-326 (375)
49 TIGR00897 2A0118 polyol permea 100.0 5.3E-30 1.2E-34 245.7 32.7 267 103-390 17-287 (402)
50 TIGR00887 2A0109 phosphate:H+ 100.0 6.3E-30 1.4E-34 252.0 33.9 354 94-460 11-431 (502)
51 PRK03893 putative sialic acid 100.0 1.5E-29 3.3E-34 249.9 34.1 347 95-461 16-406 (496)
52 PRK10077 xylE D-xylose transpo 100.0 3.6E-30 7.9E-35 253.3 29.0 349 95-460 8-403 (479)
53 PRK05122 major facilitator sup 100.0 1E-29 2.2E-34 244.1 30.9 319 99-460 15-341 (399)
54 PRK11195 lysophospholipid tran 100.0 2E-29 4.2E-34 240.5 31.6 325 103-460 7-333 (393)
55 TIGR00879 SP MFS transporter, 100.0 2E-30 4.4E-35 255.3 25.0 294 95-390 24-349 (481)
56 TIGR00885 fucP L-fucose:H+ sym 100.0 6E-29 1.3E-33 237.7 33.8 322 101-455 5-354 (410)
57 PRK10489 enterobactin exporter 100.0 1E-29 2.2E-34 245.3 26.1 323 107-460 25-351 (417)
58 PRK11646 multidrug resistance 100.0 2.7E-28 5.9E-33 233.2 34.6 312 112-461 23-337 (400)
59 PRK03633 putative MFS family t 100.0 3.9E-28 8.4E-33 231.3 33.2 258 101-390 8-265 (381)
60 TIGR00805 oat sodium-independe 100.0 6.6E-30 1.4E-34 255.1 21.7 289 102-390 36-397 (633)
61 PRK12382 putative transporter; 100.0 1.8E-28 3.9E-33 234.8 29.9 317 101-460 17-341 (392)
62 TIGR00898 2A0119 cation transp 100.0 3.2E-29 6.9E-34 248.1 25.2 322 120-460 110-449 (505)
63 PRK09874 drug efflux system pr 100.0 9E-28 1.9E-32 231.5 34.6 323 103-460 18-350 (408)
64 cd06174 MFS The Major Facilita 100.0 2.3E-28 4.9E-33 230.6 29.2 301 103-460 3-304 (352)
65 TIGR00896 CynX cyanate transpo 100.0 1.2E-28 2.6E-33 232.8 27.1 244 116-390 17-262 (355)
66 TIGR00902 2A0127 phenyl propri 100.0 5.5E-28 1.2E-32 230.1 30.8 318 104-459 9-330 (382)
67 TIGR00883 2A0106 metabolite-pr 100.0 6.7E-28 1.4E-32 231.2 30.7 320 109-460 3-351 (394)
68 TIGR00901 2A0125 AmpG-related 100.0 1.2E-27 2.5E-32 226.2 31.7 313 116-460 5-348 (356)
69 PRK15011 sugar efflux transpor 100.0 1.4E-27 3E-32 228.2 32.6 315 107-460 23-343 (393)
70 PRK11128 putative 3-phenylprop 100.0 3E-27 6.4E-32 225.2 30.9 314 108-459 13-330 (382)
71 KOG2504 Monocarboxylate transp 100.0 1.2E-27 2.6E-32 230.7 26.5 347 94-452 41-418 (509)
72 PRK10054 putative transporter; 100.0 2.6E-27 5.7E-32 226.0 28.6 319 106-460 14-337 (395)
73 PRK11010 ampG muropeptide tran 100.0 2.1E-26 4.5E-31 225.3 33.8 327 102-459 15-354 (491)
74 TIGR00806 rfc RFC reduced fola 100.0 4.2E-26 9.1E-31 211.3 33.2 337 114-461 41-393 (511)
75 COG0738 FucP Fucose permease [ 100.0 8.3E-26 1.8E-30 202.2 32.5 327 99-458 13-360 (422)
76 PF06609 TRI12: Fungal trichot 100.0 3.6E-26 7.8E-31 220.5 30.9 350 98-460 43-444 (599)
77 PRK06814 acylglycerophosphoeth 100.0 3.3E-26 7.2E-31 247.4 31.9 330 102-460 18-373 (1140)
78 PRK08633 2-acyl-glycerophospho 100.0 3.1E-26 6.7E-31 248.6 30.8 319 116-460 27-361 (1146)
79 KOG0253 Synaptic vesicle trans 99.9 1.9E-25 4.2E-30 195.8 26.3 354 93-460 72-473 (528)
80 KOG0254 Predicted transporter 99.9 6E-26 1.3E-30 223.8 26.2 348 98-459 44-433 (513)
81 PF05977 MFS_3: Transmembrane 99.9 2E-25 4.2E-30 216.5 29.1 331 101-460 12-346 (524)
82 TIGR00882 2A0105 oligosacchari 99.9 7.5E-25 1.6E-29 209.9 31.5 328 102-457 5-343 (396)
83 KOG0569 Permease of the major 99.9 1.3E-25 2.8E-30 211.3 24.6 354 95-459 7-406 (485)
84 PRK11902 ampG muropeptide tran 99.9 2.1E-24 4.6E-29 207.0 33.7 264 104-390 4-276 (402)
85 PRK09528 lacY galactoside perm 99.9 8E-25 1.7E-29 211.4 29.1 326 106-459 17-353 (420)
86 PTZ00207 hypothetical protein; 99.9 3.4E-24 7.5E-29 208.3 33.3 360 93-457 22-487 (591)
87 COG2807 CynX Cyanate permease 99.9 1.6E-24 3.4E-29 191.1 27.7 314 98-451 11-325 (395)
88 KOG3764 Vesicular amine transp 99.9 8E-26 1.7E-30 200.7 18.9 265 126-424 98-363 (464)
89 KOG2615 Permease of the major 99.9 3.7E-25 8.1E-30 195.3 20.2 315 128-461 62-392 (451)
90 PRK10207 dipeptide/tripeptide 99.9 7.8E-24 1.7E-28 206.1 31.7 350 101-460 16-418 (489)
91 TIGR00924 yjdL_sub1_fam amino 99.9 8.8E-24 1.9E-28 205.7 31.9 355 102-460 13-420 (475)
92 TIGR00792 gph sugar (Glycoside 99.9 1E-23 2.2E-28 205.1 25.1 301 120-452 21-341 (437)
93 TIGR00889 2A0110 nucleoside tr 99.9 6.6E-23 1.4E-27 196.9 28.1 317 105-460 8-347 (418)
94 TIGR02718 sider_RhtX_FptX side 99.9 6.2E-22 1.4E-26 189.3 33.1 265 101-390 3-274 (390)
95 KOG0255 Synaptic vesicle trans 99.9 1.7E-23 3.7E-28 207.6 22.3 315 126-459 110-444 (521)
96 KOG0252 Inorganic phosphate tr 99.9 5.2E-24 1.1E-28 192.6 13.1 357 93-461 35-446 (538)
97 PRK09584 tppB putative tripept 99.9 2.6E-21 5.7E-26 189.5 31.7 350 103-460 25-421 (500)
98 TIGR01301 GPH_sucrose GPH fami 99.9 6.8E-20 1.5E-24 175.0 32.6 326 112-460 17-421 (477)
99 PF00083 Sugar_tr: Sugar (and 99.9 1.3E-26 2.9E-31 226.2 -16.4 342 105-461 6-389 (451)
100 PRK15462 dipeptide/tripeptide 99.9 1.2E-19 2.5E-24 174.1 31.2 350 104-460 14-416 (493)
101 KOG2563 Permease of the major 99.9 1.2E-19 2.6E-24 164.8 25.8 280 92-390 38-331 (480)
102 KOG4686 Predicted sugar transp 99.9 1.1E-21 2.3E-26 166.4 8.8 341 94-460 39-391 (459)
103 PRK09669 putative symporter Ya 99.9 4.4E-19 9.4E-24 172.5 28.4 301 119-452 30-349 (444)
104 PF03825 Nuc_H_symport: Nucleo 99.9 1.3E-18 2.8E-23 164.3 29.6 322 105-460 8-340 (400)
105 PF13347 MFS_2: MFS/sugar tran 99.8 3.7E-19 8E-24 172.2 21.5 302 120-452 23-345 (428)
106 TIGR00788 fbt folate/biopterin 99.8 6.4E-19 1.4E-23 171.3 21.0 342 99-460 26-390 (468)
107 TIGR01272 gluP glucose/galacto 99.8 2.3E-18 4.9E-23 158.2 23.2 241 187-459 8-267 (310)
108 PRK10429 melibiose:sodium symp 99.8 5.7E-18 1.2E-22 165.7 27.1 306 121-452 29-354 (473)
109 PRK09848 glucuronide transport 99.8 1.6E-17 3.5E-22 161.8 26.2 299 121-452 31-349 (448)
110 PF01306 LacY_symp: LacY proto 99.8 1.1E-16 2.3E-21 148.5 27.7 322 105-454 13-344 (412)
111 KOG3626 Organic anion transpor 99.8 4.1E-18 8.9E-23 165.9 18.0 292 99-390 97-459 (735)
112 PF11700 ATG22: Vacuole efflux 99.8 1.1E-15 2.5E-20 147.1 34.8 305 134-460 70-419 (477)
113 PRK11462 putative transporter; 99.8 5.2E-16 1.1E-20 150.9 31.4 245 121-390 32-293 (460)
114 COG2211 MelB Na+/melibiose sym 99.8 4.3E-16 9.4E-21 145.8 28.2 304 121-452 35-357 (467)
115 PF03137 OATP: Organic Anion T 99.7 1.3E-19 2.8E-24 176.7 -0.3 288 103-390 7-372 (539)
116 COG3104 PTR2 Dipeptide/tripept 99.7 2.4E-15 5.2E-20 139.5 25.6 347 104-454 26-426 (498)
117 PF05631 DUF791: Protein of un 99.7 1.1E-14 2.4E-19 130.6 27.8 245 117-386 52-304 (354)
118 TIGR00889 2A0110 nucleoside tr 99.7 6.1E-16 1.3E-20 148.8 19.6 161 120-280 229-406 (418)
119 TIGR00880 2_A_01_02 Multidrug 99.7 1.9E-16 4.2E-21 128.0 12.3 137 140-278 4-140 (141)
120 PF03209 PUCC: PUCC protein; 99.7 2.8E-14 6E-19 130.0 26.4 307 125-460 6-340 (403)
121 COG2270 Permeases of the major 99.7 2.6E-14 5.7E-19 129.8 23.9 305 132-461 56-381 (438)
122 PRK05122 major facilitator sup 99.7 1.3E-14 2.8E-19 139.5 22.8 157 121-281 238-394 (399)
123 KOG2816 Predicted transporter 99.7 1.1E-14 2.4E-19 138.6 21.5 339 99-461 22-370 (463)
124 TIGR00890 2A0111 Oxalate/Forma 99.7 3.2E-15 7E-20 142.3 17.6 149 120-268 226-374 (377)
125 KOG2325 Predicted transporter/ 99.7 1.7E-14 3.7E-19 135.4 21.9 256 96-367 31-305 (488)
126 PRK09528 lacY galactoside perm 99.7 2.2E-15 4.7E-20 145.7 16.2 152 127-280 255-407 (420)
127 PRK10642 proline/glycine betai 99.6 3.3E-14 7.1E-19 140.0 23.3 163 117-282 268-435 (490)
128 PRK11551 putative 3-hydroxyphe 99.6 1.9E-14 4.2E-19 138.6 20.5 157 117-275 238-395 (406)
129 TIGR01299 synapt_SV2 synaptic 99.6 2.2E-14 4.8E-19 144.5 21.6 140 137-280 598-737 (742)
130 TIGR00902 2A0127 phenyl propri 99.6 3.9E-14 8.4E-19 135.1 21.9 154 115-272 221-375 (382)
131 PRK15011 sugar efflux transpor 99.6 2.9E-14 6.3E-19 136.5 20.8 153 120-275 237-390 (393)
132 PRK12382 putative transporter; 99.6 5.2E-14 1.1E-18 134.9 21.3 153 120-276 237-389 (392)
133 PRK10489 enterobactin exporter 99.6 6.4E-14 1.4E-18 135.4 20.6 162 118-281 242-404 (417)
134 PRK09874 drug efflux system pr 99.6 2.6E-14 5.7E-19 137.8 17.5 158 118-277 238-399 (408)
135 cd06174 MFS The Major Facilita 99.6 5.7E-14 1.2E-18 132.3 19.4 163 109-273 185-349 (352)
136 TIGR00899 2A0120 sugar efflux 99.6 1.3E-13 2.9E-18 131.2 20.3 148 124-274 225-372 (375)
137 PRK09556 uhpT sugar phosphate 99.6 9.6E-14 2.1E-18 136.0 19.7 171 103-275 262-448 (467)
138 PF01770 Folate_carrier: Reduc 99.6 1.1E-11 2.4E-16 114.6 31.4 330 120-460 25-379 (412)
139 PRK03633 putative MFS family t 99.6 4.4E-13 9.6E-18 127.8 22.7 151 120-275 221-371 (381)
140 PRK03545 putative arabinose tr 99.6 4.4E-13 9.6E-18 128.3 22.1 153 122-278 229-382 (390)
141 TIGR00893 2A0114 d-galactonate 99.6 2.3E-13 5.1E-18 130.4 19.8 166 106-274 222-397 (399)
142 PRK03893 putative sialic acid 99.6 7.1E-14 1.5E-18 138.3 16.6 152 118-269 294-446 (496)
143 TIGR00892 2A0113 monocarboxyla 99.6 1.4E-13 3.1E-18 134.0 17.2 153 117-271 259-416 (455)
144 TIGR00883 2A0106 metabolite-pr 99.5 1.4E-13 3E-18 131.9 16.2 159 108-266 228-391 (394)
145 PRK03699 putative transporter; 99.5 2.7E-13 5.9E-18 129.8 18.2 156 117-275 223-379 (394)
146 PRK09705 cynX putative cyanate 99.5 9.1E-13 2E-17 126.1 21.6 163 117-282 223-387 (393)
147 TIGR00897 2A0118 polyol permea 99.5 9.3E-13 2E-17 126.5 21.5 165 109-275 232-400 (402)
148 TIGR00879 SP MFS transporter, 99.5 3.2E-13 7E-18 132.9 18.0 181 100-280 285-474 (481)
149 PRK11663 regulatory protein Uh 99.5 1.4E-12 3E-17 126.5 21.5 160 116-278 260-426 (434)
150 PRK11273 glpT sn-glycerol-3-ph 99.5 8.9E-13 1.9E-17 128.6 20.2 160 117-276 271-435 (452)
151 PRK11128 putative 3-phenylprop 99.5 1.9E-12 4.1E-17 123.5 21.8 146 121-270 227-373 (382)
152 TIGR00891 2A0112 putative sial 99.5 5.5E-13 1.2E-17 128.4 15.6 136 124-261 264-401 (405)
153 PRK12307 putative sialic acid 99.5 1.7E-12 3.7E-17 125.9 19.0 143 118-260 250-392 (426)
154 PRK11010 ampG muropeptide tran 99.5 3.5E-11 7.6E-16 118.2 27.9 155 121-276 245-403 (491)
155 PRK10077 xylE D-xylose transpo 99.5 2E-12 4.4E-17 127.4 18.6 164 117-280 289-461 (479)
156 COG2814 AraJ Arabinose efflux 99.5 6.6E-12 1.4E-16 115.5 20.4 163 112-277 225-387 (394)
157 COG2271 UhpC Sugar phosphate p 99.5 1.4E-12 2.9E-17 118.6 15.4 181 99-279 252-437 (448)
158 PF05977 MFS_3: Transmembrane 99.5 6.9E-12 1.5E-16 122.4 21.1 154 118-273 237-391 (524)
159 PRK09952 shikimate transporter 99.5 1.1E-11 2.3E-16 120.4 21.8 152 124-275 276-432 (438)
160 TIGR00882 2A0105 oligosacchari 99.5 4E-12 8.6E-17 122.0 18.6 143 130-274 250-393 (396)
161 TIGR00900 2A0121 H+ Antiporter 99.5 2.9E-12 6.3E-17 121.4 17.4 132 120-253 232-365 (365)
162 TIGR02718 sider_RhtX_FptX side 99.4 1E-11 2.2E-16 118.9 20.0 151 121-271 230-386 (390)
163 TIGR00895 2A0115 benzoate tran 99.4 5.4E-12 1.2E-16 121.1 17.9 141 106-248 257-397 (398)
164 PF11700 ATG22: Vacuole efflux 99.4 1.7E-11 3.6E-16 118.4 21.0 157 117-275 300-467 (477)
165 TIGR00792 gph sugar (Glycoside 99.4 8.9E-12 1.9E-16 121.3 18.3 132 122-255 245-384 (437)
166 PRK15075 citrate-proton sympor 99.4 3.5E-11 7.5E-16 116.8 20.6 141 115-255 254-398 (434)
167 PRK10504 putative transporter; 99.4 1.6E-11 3.5E-16 120.6 18.5 139 116-254 278-418 (471)
168 KOG2504 Monocarboxylate transp 99.4 9.9E-12 2.1E-16 120.7 16.4 176 99-276 298-476 (509)
169 PRK10054 putative transporter; 99.4 1.3E-11 2.8E-16 118.1 16.8 152 127-280 237-388 (395)
170 PF01306 LacY_symp: LacY proto 99.4 4.6E-11 1E-15 111.2 19.6 152 128-281 253-405 (412)
171 TIGR00712 glpT glycerol-3-phos 99.4 2.5E-11 5.4E-16 118.0 18.6 162 118-279 270-436 (438)
172 PF06813 Nodulin-like: Nodulin 99.4 2.3E-11 5E-16 105.9 16.0 179 98-280 2-185 (250)
173 TIGR01272 gluP glucose/galacto 99.4 9.3E-11 2E-15 107.9 21.0 156 104-264 145-303 (310)
174 TIGR00881 2A0104 phosphoglycer 99.4 1.9E-11 4.2E-16 116.4 17.1 142 117-258 234-379 (379)
175 TIGR00887 2A0109 phosphate:H+ 99.4 7E-12 1.5E-16 124.0 14.5 163 118-281 307-493 (502)
176 PRK15402 multidrug efflux syst 99.4 4.7E-11 1E-15 115.0 19.6 156 122-278 238-397 (406)
177 PRK10213 nepI ribonucleoside t 99.4 1.4E-10 3E-15 111.0 21.8 148 121-271 239-386 (394)
178 PRK11902 ampG muropeptide tran 99.3 1.6E-10 3.4E-15 111.1 20.8 148 123-275 234-389 (402)
179 PRK11646 multidrug resistance 99.3 5.1E-11 1.1E-15 114.2 17.0 152 120-273 229-385 (400)
180 PRK10406 alpha-ketoglutarate t 99.3 2E-10 4.4E-15 111.4 21.3 156 118-274 262-422 (432)
181 PF03825 Nuc_H_symport: Nucleo 99.3 2.8E-10 6.1E-15 107.9 20.9 168 110-278 218-397 (400)
182 PRK10091 MFS transport protein 99.3 2.6E-10 5.6E-15 108.9 20.8 151 121-275 222-375 (382)
183 TIGR00926 2A1704 Peptide:H+ sy 99.3 4.4E-09 9.6E-14 105.2 30.0 157 120-276 9-182 (654)
184 PLN00028 nitrate transmembrane 99.3 5.9E-11 1.3E-15 116.4 16.4 148 124-275 278-432 (476)
185 TIGR00896 CynX cyanate transpo 99.3 1.5E-10 3.2E-15 109.4 17.9 136 117-255 215-353 (355)
186 TIGR02332 HpaX 4-hydroxyphenyl 99.3 4.7E-11 1E-15 115.0 14.7 161 103-265 246-410 (412)
187 PF03092 BT1: BT1 family; Int 99.3 3.5E-11 7.5E-16 115.7 13.7 161 117-278 8-177 (433)
188 TIGR00898 2A0119 cation transp 99.3 2E-10 4.2E-15 114.1 19.3 148 126-279 350-497 (505)
189 PRK15034 nitrate/nitrite trans 99.3 4.1E-10 9E-15 107.5 19.0 175 103-278 256-456 (462)
190 PRK09848 glucuronide transport 99.3 4.5E-10 9.7E-15 109.6 19.6 138 117-254 246-391 (448)
191 COG2270 Permeases of the major 99.3 1.7E-10 3.6E-15 105.3 15.1 172 100-274 255-427 (438)
192 COG2223 NarK Nitrate/nitrite t 99.2 2.4E-10 5.2E-15 104.3 15.5 175 101-276 220-401 (417)
193 KOG0569 Permease of the major 99.2 3.5E-10 7.7E-15 107.5 16.6 182 101-283 272-461 (485)
194 PRK08633 2-acyl-glycerophospho 99.2 2.8E-10 6.1E-15 124.4 18.1 143 123-267 257-401 (1146)
195 TIGR00711 efflux_EmrB drug res 99.2 3.6E-10 7.8E-15 111.6 16.8 134 119-252 275-411 (485)
196 PRK10133 L-fucose transporter; 99.2 1.6E-09 3.5E-14 104.9 20.2 141 126-271 287-428 (438)
197 TIGR00710 efflux_Bcr_CflA drug 99.2 1.2E-09 2.6E-14 104.4 18.6 139 120-260 227-370 (385)
198 PRK10473 multidrug efflux syst 99.2 2.3E-09 5E-14 102.8 20.3 135 125-266 230-364 (392)
199 TIGR00894 2A0114euk Na(+)-depe 99.2 4.7E-10 1E-14 110.1 15.6 172 102-275 264-449 (465)
200 PRK09669 putative symporter Ya 99.2 1.5E-09 3.2E-14 105.8 18.3 133 123-255 253-392 (444)
201 PRK10429 melibiose:sodium symp 99.2 2.5E-09 5.4E-14 104.9 19.4 139 116-254 248-396 (473)
202 PF07690 MFS_1: Major Facilita 99.2 4.9E-10 1.1E-14 105.6 14.0 126 117-242 224-352 (352)
203 PRK11195 lysophospholipid tran 99.2 2.2E-09 4.8E-14 102.7 18.2 143 124-270 231-374 (393)
204 TIGR00769 AAA ADP/ATP carrier 99.2 2.5E-07 5.5E-12 88.6 31.7 275 99-390 7-333 (472)
205 PRK14995 methyl viologen resis 99.2 1.2E-09 2.6E-14 107.9 16.6 132 120-251 280-413 (495)
206 TIGR00901 2A0125 AmpG-related 99.2 4.7E-10 1E-14 106.0 13.2 119 117-235 227-355 (356)
207 PRK06814 acylglycerophosphoeth 99.1 9.7E-10 2.1E-14 119.8 17.3 149 120-268 246-414 (1140)
208 KOG0637 Sucrose transporter an 99.1 1.4E-09 2.9E-14 100.0 15.3 261 113-392 46-364 (498)
209 TIGR00903 2A0129 major facilit 99.1 3.6E-09 7.8E-14 99.9 18.7 162 104-273 197-362 (368)
210 PRK11043 putative transporter; 99.1 5.9E-09 1.3E-13 100.2 20.5 136 120-256 224-362 (401)
211 KOG0253 Synaptic vesicle trans 99.1 4.9E-10 1.1E-14 99.8 11.0 131 143-279 390-522 (528)
212 PRK11102 bicyclomycin/multidru 99.1 6.6E-09 1.4E-13 99.0 19.1 121 124-246 220-344 (377)
213 COG0477 ProP Permeases of the 99.1 6.5E-09 1.4E-13 95.9 18.6 158 109-268 12-177 (338)
214 KOG4686 Predicted sugar transp 99.1 1.6E-09 3.4E-14 93.1 12.6 160 99-264 267-430 (459)
215 PF13347 MFS_2: MFS/sugar tran 99.1 2.6E-09 5.6E-14 103.6 15.6 149 107-255 233-388 (428)
216 TIGR00924 yjdL_sub1_fam amino 99.1 1.7E-08 3.8E-13 98.7 19.8 140 136-275 314-467 (475)
217 KOG4332 Predicted sugar transp 99.0 1.3E-08 2.8E-13 86.8 15.3 313 113-458 51-381 (454)
218 PF06963 FPN1: Ferroportin1 (F 99.0 2E-07 4.3E-12 88.3 24.1 288 101-390 4-323 (432)
219 PF02487 CLN3: CLN3 protein; 99.0 4.6E-07 9.9E-12 84.3 25.2 136 137-280 62-199 (402)
220 COG2807 CynX Cyanate permease 99.0 5.3E-08 1.2E-12 87.3 18.0 178 92-276 205-385 (395)
221 TIGR00788 fbt folate/biopterin 99.0 1.8E-08 3.9E-13 98.4 15.8 153 126-278 280-447 (468)
222 TIGR00885 fucP L-fucose:H+ sym 99.0 7E-08 1.5E-12 92.7 19.5 140 120-264 253-400 (410)
223 PRK11462 putative transporter; 99.0 9E-08 1.9E-12 93.4 20.2 123 132-254 261-390 (460)
224 PRK11652 emrD multidrug resist 98.9 9.2E-08 2E-12 91.8 19.9 126 125-251 234-360 (394)
225 KOG3098 Uncharacterized conser 98.9 1.1E-07 2.3E-12 90.0 19.6 294 140-458 56-389 (461)
226 KOG3762 Predicted transporter 98.9 4.2E-09 9E-14 98.7 9.5 149 125-275 397-546 (618)
227 COG2211 MelB Na+/melibiose sym 98.9 1.8E-07 3.8E-12 88.5 18.7 158 94-254 234-399 (467)
228 KOG3764 Vesicular amine transp 98.9 8.3E-09 1.8E-13 93.3 8.7 163 111-275 282-453 (464)
229 PRK09584 tppB putative tripept 98.9 1.1E-07 2.3E-12 93.8 17.3 139 136-274 318-477 (500)
230 COG0738 FucP Fucose permease [ 98.8 2.1E-07 4.6E-12 84.8 16.7 164 101-269 238-402 (422)
231 KOG3810 Micronutrient transpor 98.8 8.2E-08 1.8E-12 85.1 13.0 318 128-461 35-366 (433)
232 PF03209 PUCC: PUCC protein; 98.8 8.7E-07 1.9E-11 81.6 19.7 158 117-274 226-396 (403)
233 TIGR00886 2A0108 nitrite extru 98.8 6.2E-08 1.4E-12 91.9 12.9 113 124-237 251-365 (366)
234 KOG2532 Permease of the major 98.8 9.6E-08 2.1E-12 92.0 13.1 177 99-277 258-448 (466)
235 PRK15403 multidrug efflux syst 98.7 9.4E-07 2E-11 85.2 19.1 153 116-271 235-392 (413)
236 KOG3574 Acetyl-CoA transporter 98.7 4.3E-06 9.4E-11 75.4 20.8 264 97-387 29-323 (510)
237 PRK10207 dipeptide/tripeptide 98.7 1.3E-06 2.9E-11 85.6 18.4 140 136-275 311-475 (489)
238 PF06779 DUF1228: Protein of u 98.7 1.2E-07 2.6E-12 66.8 7.7 80 111-192 4-83 (85)
239 PF05978 UNC-93: Ion channel r 98.7 2.5E-06 5.4E-11 68.8 16.1 108 139-249 42-149 (156)
240 KOG0252 Inorganic phosphate tr 98.6 1.2E-07 2.6E-12 87.5 8.6 176 99-280 304-501 (538)
241 PF03219 TLC: TLC ATP/ADP tran 98.6 0.0002 4.3E-09 69.4 30.7 281 96-390 21-349 (491)
242 KOG3762 Predicted transporter 98.6 3.7E-07 8E-12 86.0 11.6 137 314-460 361-498 (618)
243 TIGR01301 GPH_sucrose GPH fami 98.6 7.3E-06 1.6E-10 79.2 20.9 142 138-281 309-476 (477)
244 PF00083 Sugar_tr: Sugar (and 98.6 3.9E-10 8.4E-15 110.3 -9.5 163 117-282 271-442 (451)
245 PRK15462 dipeptide/tripeptide 98.5 1.1E-06 2.4E-11 85.2 12.1 129 323-460 8-141 (493)
246 KOG0254 Predicted transporter 98.5 7E-06 1.5E-10 81.5 17.3 181 100-281 296-488 (513)
247 PF06609 TRI12: Fungal trichot 98.5 1.4E-05 3.1E-10 78.6 18.6 148 101-248 312-464 (599)
248 PTZ00207 hypothetical protein; 98.5 9.2E-06 2E-10 80.3 17.1 174 99-276 353-552 (591)
249 KOG2533 Permease of the major 98.4 1.7E-06 3.7E-11 83.7 10.1 164 98-263 272-443 (495)
250 PF12832 MFS_1_like: MFS_1 lik 98.4 2.6E-06 5.6E-11 59.7 8.2 71 104-174 5-75 (77)
251 PF00854 PTR2: POT family; In 98.3 1.6E-05 3.5E-10 75.5 13.8 111 165-275 2-122 (372)
252 KOG2615 Permease of the major 98.2 2.2E-05 4.8E-10 71.2 12.4 123 126-250 289-413 (451)
253 KOG0255 Synaptic vesicle trans 98.2 0.00015 3.2E-09 72.4 19.6 159 122-284 341-500 (521)
254 KOG2816 Predicted transporter 98.2 7.1E-05 1.5E-09 72.1 16.2 126 122-250 265-391 (463)
255 PF13000 Acatn: Acetyl-coenzym 98.2 0.00031 6.6E-09 66.4 19.1 282 102-390 3-339 (544)
256 PF12832 MFS_1_like: MFS_1 lik 98.1 2E-05 4.3E-10 55.3 7.1 62 328-390 4-65 (77)
257 TIGR00806 rfc RFC reduced fola 98.0 3.8E-05 8.3E-10 72.9 10.6 108 343-460 44-153 (511)
258 COG3202 ATP/ADP translocase [E 98.0 0.014 3.1E-07 55.4 30.9 279 97-390 25-352 (509)
259 PF02487 CLN3: CLN3 protein; 97.9 0.0007 1.5E-08 63.4 17.0 116 129-248 276-394 (402)
260 COG3104 PTR2 Dipeptide/tripept 97.7 0.0015 3.3E-08 62.0 15.7 142 134-275 324-486 (498)
261 KOG3097 Predicted membrane pro 97.7 0.007 1.5E-07 54.1 18.6 70 146-218 70-139 (390)
262 PRK03612 spermidine synthase; 97.7 0.003 6.5E-08 62.3 18.5 142 126-269 42-190 (521)
263 KOG1330 Sugar transporter/spin 97.7 8E-05 1.7E-09 69.5 6.8 124 328-461 37-161 (493)
264 KOG1237 H+/oligopeptide sympor 97.6 0.0014 3.1E-08 65.0 14.6 159 117-275 56-244 (571)
265 PF06813 Nodulin-like: Nodulin 97.5 0.00039 8.5E-09 61.0 8.1 114 337-461 15-135 (250)
266 TIGR00880 2_A_01_02 Multidrug 97.5 0.00025 5.3E-09 56.5 6.0 88 364-460 2-90 (141)
267 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0027 5.9E-08 55.0 12.1 100 221-336 2-106 (267)
268 KOG3880 Predicted small molecu 97.4 0.0011 2.3E-08 58.6 8.9 139 136-281 64-204 (409)
269 PF06963 FPN1: Ferroportin1 (F 97.4 0.014 3E-07 55.8 17.2 148 101-248 260-415 (432)
270 KOG1479 Nucleoside transporter 97.4 0.0048 1E-07 57.5 13.4 122 100-224 19-151 (406)
271 KOG2563 Permease of the major 97.4 0.00063 1.4E-08 63.5 7.4 175 104-278 271-452 (480)
272 TIGR00805 oat sodium-independe 97.4 0.00034 7.3E-09 71.0 6.3 52 339-390 47-98 (633)
273 PF03092 BT1: BT1 family; Int 97.3 0.0033 7.2E-08 60.8 12.6 123 131-253 252-382 (433)
274 KOG3098 Uncharacterized conser 97.2 0.029 6.3E-07 53.8 17.0 111 137-248 282-411 (461)
275 TIGR00939 2a57 Equilibrative N 97.1 0.029 6.3E-07 54.2 16.7 52 188-244 105-156 (437)
276 TIGR00939 2a57 Equilibrative N 97.0 0.06 1.3E-06 52.0 16.9 112 136-248 309-431 (437)
277 PF06779 DUF1228: Protein of u 96.6 0.012 2.5E-07 41.8 6.7 76 337-422 5-80 (85)
278 KOG2325 Predicted transporter/ 96.3 0.012 2.6E-07 56.5 7.4 179 96-274 259-473 (488)
279 PF01770 Folate_carrier: Reduc 96.0 0.19 4.2E-06 47.5 13.2 100 132-233 283-384 (412)
280 PF05631 DUF791: Protein of un 95.8 0.29 6.4E-06 45.0 13.2 38 353-390 62-99 (354)
281 PF03137 OATP: Organic Anion T 95.7 0.0027 5.8E-08 63.0 0.0 153 99-251 305-514 (539)
282 KOG4332 Predicted sugar transp 94.0 1.5 3.3E-05 38.7 11.9 136 136-271 284-426 (454)
283 PF13000 Acatn: Acetyl-coenzym 94.0 1.3 2.9E-05 42.7 12.7 64 192-255 408-471 (544)
284 PF05978 UNC-93: Ion channel r 93.6 1.2 2.5E-05 36.2 10.2 116 333-458 5-126 (156)
285 PF01733 Nucleoside_tran: Nucl 93.3 0.029 6.3E-07 51.6 0.6 108 138-246 186-305 (309)
286 KOG1479 Nucleoside transporter 93.0 1.1 2.3E-05 42.3 10.2 113 132-246 280-400 (406)
287 KOG2601 Iron transporter [Inor 92.4 2.3 4.9E-05 39.5 11.1 167 101-267 29-217 (503)
288 KOG3880 Predicted small molecu 92.4 1.1 2.5E-05 40.2 8.9 118 127-248 280-401 (409)
289 TIGR00769 AAA ADP/ATP carrier 91.7 14 0.00031 36.1 19.8 73 196-268 273-346 (472)
290 COG0477 ProP Permeases of the 91.2 1.5 3.2E-05 39.6 9.2 106 338-453 16-125 (338)
291 PRK00293 dipZ thiol:disulfide 91.1 19 0.0004 36.5 21.5 32 358-389 323-354 (571)
292 KOG0637 Sucrose transporter an 90.6 0.2 4.4E-06 47.4 2.8 129 137-267 335-487 (498)
293 PF07672 MFS_Mycoplasma: Mycop 90.6 4.6 9.9E-05 35.6 10.7 103 137-240 144-254 (267)
294 TIGR00926 2A1704 Peptide:H+ sy 90.0 1.2 2.7E-05 45.5 8.0 52 339-390 2-53 (654)
295 KOG4830 Predicted sugar transp 89.3 0.097 2.1E-06 45.4 -0.4 63 316-378 193-255 (412)
296 PF06912 DUF1275: Protein of u 88.0 16 0.00035 31.3 17.6 43 221-264 158-200 (209)
297 PF01733 Nucleoside_tran: Nucl 87.8 0.17 3.7E-06 46.6 0.2 41 197-242 5-45 (309)
298 COG4262 Predicted spermidine s 87.0 25 0.00055 32.5 21.6 148 122-271 30-186 (508)
299 PRK03612 spermidine synthase; 85.4 16 0.00034 36.5 12.4 58 329-386 19-76 (521)
300 KOG3626 Organic anion transpor 84.8 3.8 8.2E-05 42.0 7.7 79 100-178 393-475 (735)
301 PF02990 EMP70: Endomembrane p 82.8 21 0.00046 35.6 12.1 71 318-389 252-322 (521)
302 KOG3810 Micronutrient transpor 82.4 14 0.00031 34.2 9.6 95 137-233 274-370 (433)
303 PF03219 TLC: TLC ATP/ADP tran 80.6 62 0.0014 32.0 19.6 75 196-270 289-364 (491)
304 PRK10263 DNA translocase FtsK; 79.4 30 0.00066 38.1 12.2 25 236-260 142-166 (1355)
305 COG1230 CzcD Co/Zn/Cd efflux s 78.5 52 0.0011 29.9 16.0 158 94-263 20-193 (296)
306 KOG3574 Acetyl-CoA transporter 74.8 24 0.00051 33.3 8.7 136 122-257 288-437 (510)
307 TIGR00844 c_cpa1 na(+)/h(+) an 74.0 1.2E+02 0.0026 31.9 23.8 40 227-266 103-142 (810)
308 COG5336 Uncharacterized protei 73.6 13 0.00029 27.4 5.5 24 138-161 46-69 (116)
309 KOG2881 Predicted membrane pro 72.6 68 0.0015 28.3 13.7 19 372-390 252-270 (294)
310 PF12805 FUSC-like: FUSC-like 70.9 32 0.00069 31.2 8.9 37 168-205 3-39 (284)
311 PF07857 DUF1632: CEO family ( 70.8 76 0.0017 28.1 11.7 48 330-377 184-235 (254)
312 COG3619 Predicted membrane pro 68.2 81 0.0017 27.4 20.0 157 97-253 10-196 (226)
313 PF05255 UPF0220: Uncharacteri 66.7 61 0.0013 26.6 8.7 58 217-274 14-77 (166)
314 TIGR01667 YCCS_YHJK integral m 66.2 78 0.0017 33.0 11.3 51 154-205 43-97 (701)
315 PF13386 DsbD_2: Cytochrome C 65.2 85 0.0018 26.6 16.0 35 356-390 146-180 (199)
316 TIGR01666 YCCS hypothetical me 64.9 63 0.0014 33.6 10.4 50 155-205 44-97 (704)
317 PF11299 DUF3100: Protein of u 63.2 10 0.00022 32.6 3.7 53 195-248 177-229 (241)
318 PF02535 Zip: ZIP Zinc transpo 59.8 1.4E+02 0.0031 27.3 15.9 32 188-219 259-291 (317)
319 KOG1237 H+/oligopeptide sympor 59.3 2.1E+02 0.0045 29.1 15.5 65 188-252 457-521 (571)
320 PF02632 BioY: BioY family; I 53.9 51 0.0011 26.4 6.1 25 141-165 60-84 (148)
321 PF11947 DUF3464: Protein of u 53.5 45 0.00098 26.8 5.6 51 187-240 95-145 (153)
322 PF07760 DUF1616: Protein of u 52.1 1.9E+02 0.004 26.3 10.5 61 192-254 22-82 (287)
323 PF02694 UPF0060: Uncharacteri 51.5 42 0.0009 24.9 4.7 51 134-184 54-104 (107)
324 PRK10263 DNA translocase FtsK; 46.6 3.5E+02 0.0075 30.5 12.3 21 370-390 141-161 (1355)
325 COG5336 Uncharacterized protei 46.2 58 0.0013 24.2 4.7 21 370-390 52-72 (116)
326 PRK02237 hypothetical protein; 45.6 70 0.0015 23.9 5.1 51 134-184 56-106 (109)
327 PF03596 Cad: Cadmium resistan 43.8 82 0.0018 26.5 6.0 32 242-273 43-74 (191)
328 COG1268 BioY Uncharacterized c 43.3 67 0.0015 26.8 5.4 23 141-163 89-111 (184)
329 COG4769 Predicted membrane pro 40.1 46 0.00099 26.9 3.7 53 142-202 81-133 (181)
330 PF10183 ESSS: ESSS subunit of 39.8 46 0.00099 24.9 3.6 31 250-280 55-85 (105)
331 KOG3814 Signaling protein van 39.6 3.3E+02 0.0071 25.6 13.8 13 187-199 203-215 (531)
332 KOG2601 Iron transporter [Inor 38.9 2.9E+02 0.0062 26.4 9.0 68 324-391 27-94 (503)
333 PF11947 DUF3464: Protein of u 38.9 2.1E+02 0.0045 23.1 9.0 32 133-164 95-126 (153)
334 KOG2765 Predicted membrane pro 38.5 3.5E+02 0.0075 25.6 12.9 16 158-173 208-223 (416)
335 PF06638 Strabismus: Strabismu 37.9 1.3E+02 0.0029 29.3 7.1 12 187-198 179-190 (505)
336 PRK13743 conjugal transfer pro 37.6 1.3E+02 0.0028 23.1 5.5 55 104-158 48-102 (141)
337 PF04226 Transgly_assoc: Trans 36.6 1.1E+02 0.0023 19.1 5.2 33 240-272 6-42 (48)
338 PF07556 DUF1538: Protein of u 36.2 2.8E+02 0.0061 23.8 8.2 77 187-266 60-138 (212)
339 PF03547 Mem_trans: Membrane t 35.6 3.9E+02 0.0084 25.3 16.9 19 318-336 239-257 (385)
340 PLN02332 membrane bound O-acyl 34.5 4.6E+02 0.01 25.8 10.8 30 162-193 339-368 (465)
341 TIGR02230 ATPase_gene1 F0F1-AT 33.9 1.9E+02 0.0041 21.4 5.9 25 150-174 58-83 (100)
342 COG1457 CodB Purine-cytosine p 33.2 4.7E+02 0.01 25.5 17.0 147 215-390 11-158 (442)
343 TIGR02230 ATPase_gene1 F0F1-AT 32.9 2E+02 0.0044 21.2 7.1 27 227-253 45-71 (100)
344 PF11151 DUF2929: Protein of u 31.9 1.5E+02 0.0032 19.3 5.7 40 235-274 12-51 (57)
345 COG2233 UraA Xanthine/uracil p 31.6 3.4E+02 0.0074 26.5 8.8 118 103-222 20-138 (451)
346 KOG1278 Endosomal membrane pro 31.1 1.8E+02 0.0038 29.0 6.7 34 356-389 355-388 (628)
347 PF00909 Ammonium_transp: Ammo 30.7 4.9E+02 0.011 25.0 11.1 48 197-244 278-325 (399)
348 COG3559 TnrB3 Putative exporte 30.2 5.1E+02 0.011 25.1 14.1 29 204-232 176-206 (536)
349 PF11833 DUF3353: Protein of u 29.7 3.5E+02 0.0076 22.9 9.1 31 220-250 136-166 (194)
350 KOG3097 Predicted membrane pro 29.5 57 0.0012 30.1 3.1 75 131-205 307-383 (390)
351 PF12273 RCR: Chitin synthesis 29.4 26 0.00056 27.4 0.9 16 255-270 1-16 (130)
352 PF06123 CreD: Inner membrane 29.0 5.5E+02 0.012 25.0 13.9 44 124-171 316-359 (430)
353 PF04281 Tom22: Mitochondrial 28.5 3E+02 0.0065 21.8 6.6 27 214-240 60-86 (137)
354 COG2076 EmrE Membrane transpor 27.9 2.6E+02 0.0057 20.9 8.9 65 151-216 17-81 (106)
355 PF10639 UPF0546: Uncharacteri 27.7 1.4E+02 0.003 22.7 4.4 26 314-339 32-57 (113)
356 TIGR00927 2A1904 K+-dependent 27.7 5.3E+02 0.011 28.0 9.8 52 119-172 953-1004(1096)
357 PF04024 PspC: PspC domain; I 27.5 1.8E+02 0.0038 19.2 4.4 33 248-280 20-60 (61)
358 PF04341 DUF485: Protein of un 27.3 2.4E+02 0.0052 20.3 7.2 70 316-388 6-77 (91)
359 TIGR03644 marine_trans_1 proba 27.2 5.8E+02 0.012 24.6 13.1 47 198-245 298-344 (404)
360 PF03741 TerC: Integral membra 27.0 3.8E+02 0.0081 22.4 18.8 61 204-266 11-71 (183)
361 PF11368 DUF3169: Protein of u 27.0 4.4E+02 0.0096 23.2 11.0 25 224-248 9-33 (248)
362 PRK10599 calcium/sodium:proton 26.3 5.7E+02 0.012 24.3 9.8 27 115-141 238-264 (366)
363 PF07099 DUF1361: Protein of u 25.8 3.8E+02 0.0082 22.1 7.6 37 120-156 40-83 (168)
364 PRK11017 codB cytosine permeas 25.8 6E+02 0.013 24.4 17.0 52 216-267 2-54 (404)
365 PTZ00370 STEVOR; Provisional 25.7 2.4E+02 0.0052 25.4 6.1 27 252-278 255-281 (296)
366 TIGR00836 amt ammonium transpo 25.6 6.1E+02 0.013 24.4 11.3 49 197-245 283-331 (403)
367 COG0387 ChaA Ca2+/H+ antiporte 25.3 5.8E+02 0.013 24.1 9.7 27 115-141 237-263 (368)
368 PF10785 NADH-u_ox-rdase: NADH 25.3 1.8E+02 0.0039 20.8 4.5 38 147-184 31-75 (86)
369 PF02990 EMP70: Endomembrane p 25.1 4E+02 0.0087 26.7 8.5 40 219-258 291-333 (521)
370 PF13937 DUF4212: Domain of un 25.0 2.5E+02 0.0055 19.8 6.5 49 223-271 11-61 (81)
371 PF04474 DUF554: Protein of un 25.0 3.4E+02 0.0073 23.7 6.8 52 372-432 14-65 (226)
372 PF06645 SPC12: Microsomal sig 24.7 1.8E+02 0.0039 20.2 4.3 39 226-267 9-47 (76)
373 TIGR00986 3a0801s05tom22 mitoc 24.5 2.3E+02 0.0049 22.5 5.1 25 213-237 57-81 (145)
374 PF12670 DUF3792: Protein of u 24.1 3.2E+02 0.007 20.7 11.3 57 127-183 30-87 (116)
375 PRK10692 hypothetical protein; 23.9 1.8E+02 0.0039 20.6 4.0 10 209-218 25-34 (92)
376 COG1811 Uncharacterized membra 23.8 3.8E+02 0.0082 23.1 6.6 33 400-432 34-66 (228)
377 PRK15049 L-asparagine permease 23.5 7.4E+02 0.016 24.6 10.7 20 253-272 446-465 (499)
378 PF10101 DUF2339: Predicted me 23.4 5.5E+02 0.012 27.1 9.7 109 161-274 1-110 (745)
379 KOG1307 K+-dependent Ca2+/Na+ 23.2 3.9E+02 0.0085 26.0 7.3 42 122-165 447-488 (588)
380 PF11023 DUF2614: Protein of u 22.5 3.5E+02 0.0075 20.5 6.0 17 416-432 30-46 (114)
381 PRK03818 putative transporter; 22.0 7.4E+02 0.016 25.1 9.7 81 135-217 436-516 (552)
382 PF14362 DUF4407: Domain of un 21.7 4.3E+02 0.0094 24.1 7.5 17 220-236 9-25 (301)
383 PF15061 DUF4538: Domain of un 21.6 1.2E+02 0.0026 19.7 2.6 24 252-275 3-26 (58)
384 PF02694 UPF0060: Uncharacteri 20.9 1.4E+02 0.0031 22.2 3.3 31 360-390 54-84 (107)
385 KOG4830 Predicted sugar transp 20.9 2.9E+02 0.0062 24.8 5.6 122 99-221 201-325 (412)
386 PF00854 PTR2: POT family; In 20.6 6.2E+02 0.013 23.8 8.7 63 122-184 55-122 (372)
387 PF06826 Asp-Al_Ex: Predicted 20.4 4.9E+02 0.011 21.4 9.7 85 134-222 56-141 (169)
388 COG2962 RarD Predicted permeas 20.3 6.6E+02 0.014 22.8 11.0 33 316-348 61-93 (293)
389 PF10762 DUF2583: Protein of u 20.2 2.1E+02 0.0045 20.2 3.7 16 163-178 3-18 (89)
390 PRK02935 hypothetical protein; 20.1 3.8E+02 0.0082 20.0 6.5 23 404-426 19-41 (110)
391 TIGR03173 pbuX xanthine permea 20.1 7.8E+02 0.017 23.6 11.5 97 127-225 21-117 (406)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-39 Score=290.49 Aligned_cols=358 Identities=20% Similarity=0.245 Sum_probs=289.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
-++.|+.+++.+++++...++.+..++.+.|.+.++.++|.+|+|++.+++.+.+.++.++.|.++||.+.|+.+..+++
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHH--HHHHh
Q 012519 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS--PILMS 250 (461)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~l~~ 250 (461)
+.++..++.+++ ++++.+.+..+++|+.+|.-+|.+...++.|+|+++||+..++++++.++|..+.|++. +++..
T Consensus 103 lsai~nil~Gfs--~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 103 LSAIVNILFGFS--PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999999999999999999999999999 89998
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCC-CCCCChhHHHHhcchhhHHH
Q 012519 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK-PATVIPPFRRLLSKMPTWSI 329 (461)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 329 (461)
+.+||..|++.++++++..++.++..+|+|++..-.+.++......+..+ .+++.+ -.....-++.+++||.+|.+
T Consensus 181 ~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~---~~~~~~~ls~~~i~~~YVL~Nk~iW~l 257 (448)
T COG2271 181 HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYE---EEKENEGLTAWQIFVKYVLKNKLIWLL 257 (448)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhh---hhccCCCccHHHHHHHHHHcChHHHHH
Confidence 99999999999999999999999999999987643332222110000000 001111 01111235678999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHH
Q 012519 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (461)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (461)
++..++.+..-+++..|.|.|+.|..|+|...+++..+.+-.++++|.+++||++||+.+.+ |.....+.+++.
T Consensus 258 a~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i 331 (448)
T COG2271 258 ALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLI 331 (448)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987442 234444555555
Q ss_pred HHHHHHHhccChh-HHHHHHHHHHHHHHhhhh-hchhHhhhhhcccc-cccccCC
Q 012519 410 GIALIGLTAAKSP-VMASAWLTLAIGMKSFSH-SGFLVNLQEIAPQY-SGVLHGI 461 (461)
Q Consensus 410 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~-~g~~~gl 461 (461)
.++++.+...++. ......++...++.-.+. -..-....|..|++ .|++.|+
T Consensus 332 ~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf 386 (448)
T COG2271 332 TASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGF 386 (448)
T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhch
Confidence 5555555444433 222222222222222222 23344556888865 8999885
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.7e-38 Score=284.11 Aligned_cols=329 Identities=22% Similarity=0.239 Sum_probs=271.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+..+..+..+.++.|..+.........+|++.+|+|+|..++|++.+.|.++.++++++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34466778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.++.++++++ +||+.++++|++.|+..|..++...++..+..|++||++++++...+..++.++|.+++.++.+.+||
T Consensus 89 i~~n~l~alA--p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALA--PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|++|++.+.++++..+..+...| |++.+ .+++....+..+++|+|.++...+..+
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~-----------------------~~~~~~~~~~~~~l~~p~v~~~l~~t~ 221 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEIS-----------------------GSLPGPLRTLLRLLRRPGVLLGLLATF 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCC-----------------------CCCCcchhHHHHHhcCchHHHHHHHHH
Confidence 99999999999999988888888 22111 111112223458899999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHH
Q 012519 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (461)
+...+.+..++|+..++++..|++....++.+..+++++++|..++|++.|| +.+ ..+.....+.++.++
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~---------~~l~~~~~l~a~~~l 291 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR---------RALIAALLLLALALL 291 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch---------hHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 544 122333333333333
Q ss_pred HHhcc-ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 415 GLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 415 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
.+.+. .+.+...+..++.++..............+..|+.++.+.+
T Consensus 292 ~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~s 338 (394)
T COG2814 292 ALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGS 338 (394)
T ss_pred HHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHH
Confidence 33333 33433333344433333333334444455555676665543
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.4e-37 Score=293.81 Aligned_cols=293 Identities=20% Similarity=0.242 Sum_probs=243.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+.+|..+.++++.+++++++....+...|.+.+|+|++..++|++.+++.+++++++++.|++.||+|||+++..++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---- 250 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---- 250 (461)
+++.++++++ +|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++++++++.+
T Consensus 84 ~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 84 GIASTATMFA--TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHh--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999998874
Q ss_pred --hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCc---cccCCCC--CCC-CCChhHHHHhc
Q 012519 251 --QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKP---LLMGNKH--KPA-TVIPPFRRLLS 322 (461)
Q Consensus 251 --~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~-~~~~~~~~~~~ 322 (461)
..|||+.|++.+++.++..++.+++.||+|++.+...+++.+...+..... ....... +.+ .....+++++
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF- 240 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-
Confidence 369999999999888877777777788888765443333322221111100 0000000 000 1112344444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHh-hCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFV-YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
+|.+|...+..++....++.+.+|+|.|+++. .+++..+++.+.....++.+++.++.|+++||+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 68888888888888888999999999999883 367888889999999999999999999999999877
No 4
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=285.71 Aligned_cols=329 Identities=35% Similarity=0.659 Sum_probs=297.3
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
..+++.+..+.+++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++..++...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688899999999999999999999999999999999999999999999999999888556778889999999999999
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (461)
.+|+...+.++|.|++||++..++..++..+|.+++-+++|++.+. +||+++|++.++++++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccch
Q 012519 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (461)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 364 (461)
...++|.++..+...+.. .++....|++++++++.+|.+++..++.....+.+..|.|.|+++++|++..+.|+
T Consensus 225 ~is~~El~~I~~~k~~~~------~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAH------VKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred CCCHHHHHHHHhcccccc------cCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH
Confidence 999999988876554321 11115679999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh--hHHHHHHHHHHHHHHhhhhhc
Q 012519 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS--PVMASAWLTLAIGMKSFSHSG 442 (461)
Q Consensus 365 ~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 442 (461)
+.++..+...+..+++|.++||+.+|....+..||..-.++....+++++.+.+.+. .+..+.++.+..++.++..+.
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~G 378 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISG 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhh
Confidence 999999999999999999999998877778888899999999999999988887763 344566666677888888888
Q ss_pred hhHhhhhhcccccccccC
Q 012519 443 FLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 443 ~~~~~~~~~p~~~g~~~g 460 (461)
......+..|++.+.++|
T Consensus 379 f~~~~~~~apq~a~~l~g 396 (466)
T KOG2532|consen 379 FYKNHQDIAPQHAGFVMG 396 (466)
T ss_pred hHhhhhhccchHHHHHHH
Confidence 888888889998887765
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.1e-36 Score=295.40 Aligned_cols=292 Identities=16% Similarity=0.098 Sum_probs=238.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
.+..+.++.++++++++.+.++..+++..|.+.+|+|++..+.|++.+++.+++.+++++.|+++||+|||+++.+++++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 44467778888999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhc-----cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 174 WSLATFLTPW-----AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 174 ~~i~~~~~~~-----~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
++++.++.++ + ++++.+++.|+++|++.+...+...++++||+|+++||+++|++..+.++|.++++++..++
T Consensus 104 ~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 104 SAICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 7777665443 6 89999999999999999999999999999999999999999999999999999999998877
Q ss_pred Hhhc---CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh-HHHHhcch
Q 012519 249 MSQA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKM 324 (461)
Q Consensus 249 ~~~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 324 (461)
.+.. +||..|.+.+++.++..++.+++.+++|++.+..++++. ..+..... ....+.++...... .+..+++|
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEI--FGEPISEE-DKETESTDMTKWQIFVEYVLKNP 258 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhc--ccCccchh-hhccccccCcHHHHHHHHHHcCh
Confidence 7653 699999998888887777777777777765433222210 00000000 00000000011111 23478999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+|...+..++....++....|+|.|+++.+|++..++++......++.+++.++.|+++||+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r 324 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR 324 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999998888888999999999988999999999999999999999999999999999987
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.5e-35 Score=283.30 Aligned_cols=327 Identities=15% Similarity=0.128 Sum_probs=252.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
.++|..+..+.++.+..........+.+|.+.+++|.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34455555555555554444445666789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
++++++++++ +|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+++||
T Consensus 85 ~~~~~~~~~~--~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 85 IASHVLSALA--WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 9999999999 99999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|+.|++.++++++..+..+...|+.+++++ ...++.++.+|+|.++...+..+
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~ 215 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIKLLPLLPSEHS---------------------------GSLKSLPLLFRRPALVSLYLLTV 215 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------------------------chHHHHHHHHhCcHHHHHHHHHH
Confidence 999999998887776666665555432110 01124567889999887777666
Q ss_pred HHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHH
Q 012519 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (461)
+.....+....+.+.|+++.+|++..+++.+.....+++++++++.|++.||+++| .... +....+....
T Consensus 216 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~--------~~~~--~~~~~~~~~~ 285 (390)
T PRK03545 216 VVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG--------FLLI--AIALLLVCLL 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh--------HHHH--HHHHHHHHHH
Confidence 66666676778888888887899999999999999999999999999999999866 1222 2222222222
Q ss_pred -HHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 415 -GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 415 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
.....++.+......++.+.......+.......+..|+.+|+++|
T Consensus 286 ~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 332 (390)
T PRK03545 286 LLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMA 332 (390)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHH
Confidence 2222333333333333333333333344556667778887777654
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.5e-35 Score=288.31 Aligned_cols=362 Identities=27% Similarity=0.499 Sum_probs=281.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhh----------------------hcCCCchhHHHHHHHHHHHHHHh
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL----------------------AHGWSRSFSGIVQSSFLWGYLVS 150 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~~~~~s~~~~~~~~~ 150 (461)
..+.++.+..+++++..+++.++..++...+.+.+ |++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34567888888999999999999999999888876 78999999999999999999999
Q ss_pred HhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHH
Q 012519 151 PIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA 230 (461)
Q Consensus 151 ~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 230 (461)
+++.|+++||+|||+++.++.++++++.+++.++...+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999988875442257889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCC
Q 012519 231 MGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (461)
Q Consensus 231 ~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (461)
..+..+|..+++++++.+.+. .|||+.|++.+++.++..++++...+|+|+++++..+++.+...+... ..++
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~------~~~~ 246 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQ------GQKG 246 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcc------cccC
Confidence 999999999999999999988 499999999999988887777777777776555444444333322111 1111
Q ss_pred CCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 310 PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
+.....+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.++..++..++..++.++.|+++||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 247 STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11123468899999999999999999999999999999999999899999999999999999999999999999999987
Q ss_pred cCcchhh-hHHHHHHHhhHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 390 RGTSVTL-TRKILQSIGFIAPGIALIGLTA-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 390 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
|+..... .++.....+..+.++..+.... .......+..+.+.+++.+...+.......+..|+.+|.+.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 399 (465)
T TIGR00894 327 SKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKG 399 (465)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHH
Confidence 6533222 2223333333222322222222 223333333444444444444455556666777887777655
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.8e-35 Score=287.45 Aligned_cols=353 Identities=17% Similarity=0.144 Sum_probs=272.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 175 (461)
++|..+..++++.++...|...++..+|.+.+++|.+..+.+|+.+.|.++..++.+++|+++||+|||++++++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhc-CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+++++++++ +|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++.+.+++||
T Consensus 83 ~~~~~~~~a--~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFS--PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 999999999 99999999999999999998898888887776 678999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-cchhHHH----------HHHHhhcCcc-cc------------------
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELE----------YILREKQKPL-LM------------------ 304 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~-~~------------------ 304 (461)
||.|++...+.++..++.++..|+++++..+ .+..... .......+.. ..
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999888887777777777776543221 1111100 0000000000 00
Q ss_pred CCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhh
Q 012519 305 GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLS 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~ 384 (461)
..+.+.+.+..++ +++|+|.++...+..++.....+....++|.|+++.+|+++.++|....+..++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMIDM-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcCH-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011122233343 788999999888888888888888889999999999999999999999999999999999999999
Q ss_pred hhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh---ccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 385 DMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 385 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
||+++| ..+..+.++.+++...+. ..++.+......++.+.+.+...+.......+..| +++|.+.|
T Consensus 320 ~r~g~~---------~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 320 SRLGLR---------LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred HHcCch---------HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 999977 233334444433333222 12233333334445555555555555555555555 56776654
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.7e-35 Score=274.06 Aligned_cols=317 Identities=13% Similarity=0.059 Sum_probs=237.6
Q ss_pred HHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHH
Q 012519 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (461)
Q Consensus 111 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 190 (461)
+......+++.+|.+.+|+|++..+.|++.+.+.+++.+++++.|+++||+|||++++.+......+.+..... ++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP--FNYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh--ccHH
Confidence 45566788999999999999999999999999999999999999999999999998776665555554434444 6899
Q ss_pred HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 191 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
.++++|+++|++.+. .......++|++|+++|++++++.+.+..+|..+++++++.+.+++|||+.|++.++++++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999985 5566677799999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHH
Q 012519 271 VWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIY 350 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (461)
+.++..||+|+++++..+ . ++..+++++++++|.+|...+..++....++.+.+|+|.|
T Consensus 160 ~~~~~lp~~p~~~~~~~~--~-------------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFG--F-------------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred HHHHHcCCCCCCCCCCcc--h-------------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888887754321000 0 0011246789999999999999999999999999999999
Q ss_pred HHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHH
Q 012519 351 FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLT 430 (461)
Q Consensus 351 ~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (461)
+++ .|++.. .+....+..+.+. +..++++||..|++.+ +.......+..++.+.......+....+.+..
T Consensus 219 L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~~r~~~r-----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 219 LRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRVARAGLR-----SIYIRAAALLIAAFFLALAFELNRLALFAFIG 288 (368)
T ss_pred HHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHhhhhhhH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 987 578764 5555555544444 4457888888765321 11122122222333333333333333333444
Q ss_pred HHHHHHhhhhhchhHhhhhhccc-ccccccCC
Q 012519 431 LAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
+..++.....+..+.+.+|.+|+ .||++.|+
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~ 320 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGA 320 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccch
Confidence 44444555556677888999986 69999875
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=4.8e-34 Score=278.54 Aligned_cols=344 Identities=18% Similarity=0.155 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
++.+...+...+........+.+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44555566666777777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS------- 250 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~------- 250 (461)
.++.+++ ++++.++++|+++|++.+.. .....+++|++|+++||+++++.....++|..+++.+.+.+..
T Consensus 115 ~~~~~~~--~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 115 VFCMSLV--SSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHh--cCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 99999999999999998864 4456789999999999999999988877887777666655432
Q ss_pred --hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHH
Q 012519 251 --QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWS 328 (461)
Q Consensus 251 --~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (461)
..|||+.|++.+++.++..++.+++.++.|+... ++.+ ++ ...++......+++.++++++|.
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~----~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~ 256 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY----RELK---KS--------GTMPKDSFSKVLRYGVTNYRTWI 256 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch----hhHH---hc--------CccccccHHHHHHHHHcCchhHH
Confidence 2489999999999888777776666555543220 1100 00 00001111234567788999998
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHH
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (461)
+.+..++.....+....++|.|+.+.+|++..+++.+.++..++++++++++|+++||+++|.... .|+.+.....++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~l 334 (476)
T PLN00028 257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQTL 334 (476)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHHH
Confidence 888777777777778889999998888999999999999999999999999999999999863211 123333333333
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccCC
Q 012519 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGI 461 (461)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 461 (461)
.++..+.+...++.......+++...+.+...+..+.+..++.|+++|++.|+
T Consensus 335 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 387 (476)
T PLN00028 335 GGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGL 387 (476)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhh
Confidence 44433334334443333333444444444455556666777888888888774
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4e-34 Score=276.72 Aligned_cols=331 Identities=16% Similarity=0.112 Sum_probs=239.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcC---CCchhHHHHH---HHHHHHHHHhHhhhhhhhhhhcchHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHG---WSRSFSGIVQ---SSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~~~~~---s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 169 (461)
+++..+...+++.+++++|...++...|.+.++++ .+..+.+... +...++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45556777788999999999999999999999985 4555444444 44455555999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccHH--------HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHH
Q 012519 170 GVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (461)
Q Consensus 170 ~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 241 (461)
+.+++++++++++++ +++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+...|..++
T Consensus 99 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACL--PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999998 7764 688999999999999999999999999999999999999999988998888
Q ss_pred HHHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCC
Q 012519 242 LVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (461)
Q Consensus 242 ~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (461)
+.+...+. ..+|||++|++.++++++... .....||+++. +.++ . + .
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~-------~~~~------------~--~---~ 231 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ-------ETRA------------L--K---E 231 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH-------HHhh------------h--c---c
Confidence 87765553 257999999988777665432 22233443321 0000 0 0 0
Q ss_pred ChhHHHHhcchhhHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCc
Q 012519 314 IPPFRRLLSKMPTWSIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (461)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (461)
..++++++++++.+...+..++ ....++.+..|+|.|+++.+|++..+.+....+..++..++.++.|+++||++||
T Consensus 232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-- 309 (432)
T PRK10406 232 AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-- 309 (432)
T ss_pred cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--
Confidence 1256788889888876665554 3667788889999999887899988888888888888888899999999999988
Q ss_pred chhhhHHHHHHHhhHHHHHH--HHH-HhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccCC
Q 012519 393 SVTLTRKILQSIGFIAPGIA--LIG-LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
+ .+.....+..... ... .....+....+..+.+..+..+...+....+.+|.+|+ .||++.|+
T Consensus 310 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 310 -----T-SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred -----H-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhH
Confidence 2 2222222111111 111 11122222222223333333444445567778899985 69998874
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.9e-34 Score=276.79 Aligned_cols=287 Identities=18% Similarity=0.172 Sum_probs=234.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 175 (461)
.++.+.....+.+++.+++...++..+|.+.+++|.+..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 44566667778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
++.++++++ ++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+.+|||
T Consensus 100 ~~~~~~~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 100 IINILFGFS--SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHH--hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh-H-HHHhcchhhHHHHHHH
Q 012519 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-F-RRLLSKMPTWSIIVAN 333 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ 333 (461)
+.|++.+++.++..++..+..+|+|++......++.+...++.. . +.+.++....+ + ...+++|.+|.+.+..
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELA----Q-QQEGAGLSRKEILTKYVLLNPYIWLLSFSY 252 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccc----h-hccccCCChhhhHHHHHhcChHHHHHHHHH
Confidence 99999888877665555555666654321111000000000000 0 00000111111 2 2367789999988888
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
++.......+..|+|.|+++.+|++..+++...+...+++++++++.|+++||+.+
T Consensus 253 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~ 308 (434)
T PRK11663 253 VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN 308 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 88888888888999999987789999999999999999999999999999999943
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1e-33 Score=282.87 Aligned_cols=356 Identities=15% Similarity=0.142 Sum_probs=262.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
.+++|.+++++.++.+..+++...++.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45678888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 012519 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA- 252 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~- 252 (461)
.+++.++++++ ++++.++++|++.|++.|+..+...+++.|++|+++|++.++++.+++.+|.++++.++..+...+
T Consensus 242 ~~i~~ll~afa--~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFV--QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999 999999999999999999999999999999999999999999999999999999999887776543
Q ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CcchhHHHHHHHhhcCcc-----------------
Q 012519 253 ------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPL----------------- 302 (461)
Q Consensus 253 ------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------------- 302 (461)
+||+.+++.++++++. ++.+++.||+|+... +.+.++..+..++.....
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 5899888877766554 445566788886421 112222222211110000
Q ss_pred ---ccC---C-CCCCC---------------CCChhHHHHhcc---hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHh---
Q 012519 303 ---LMG---N-KHKPA---------------TVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFV--- 354 (461)
Q Consensus 303 ---~~~---~-~~~~~---------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 354 (461)
..+ + ..... ..+.+++++|+. ++.+.+++.+++..+.++++..|+|.++.+.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000 001134555544 3467788888999999999999999886541
Q ss_pred -h-----------------CCCcc--------------------------------------------------------
Q 012519 355 -Y-----------------HIDLR-------------------------------------------------------- 360 (461)
Q Consensus 355 -~-----------------g~s~~-------------------------------------------------------- 360 (461)
+ +++..
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00000
Q ss_pred -------------------------------------ccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHH
Q 012519 361 -------------------------------------QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (461)
Q Consensus 361 -------------------------------------~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (461)
.......+..++.+++.+++|+++||+||| .++.
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr---------~~l~ 629 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL---------RMLA 629 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHH
Confidence 011224455678899999999999999988 3445
Q ss_pred HhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccCC
Q 012519 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
+++++.+++.+++.+.++....+++.++..++.+...+....++.|++|. .||+++|+
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi 688 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGF 688 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 55666666655555555444444444454555555667788889999985 58887763
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.9e-34 Score=275.51 Aligned_cols=347 Identities=25% Similarity=0.391 Sum_probs=265.4
Q ss_pred HHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccc
Q 012519 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT 187 (461)
Q Consensus 108 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 187 (461)
+++..++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 012519 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 188 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 267 (461)
+++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhH
Q 012519 268 WVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWM 347 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (461)
..++.++..++++++.+...+++.+...+....+ .+..++++......++.+++|+++...+..++..........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAE--QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWF 238 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccc--cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7777776667766544333222222111111100 01111222334457788999999999999999999999999999
Q ss_pred HHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHH
Q 012519 348 PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASA 427 (461)
Q Consensus 348 ~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (461)
|.|+++.+|++..+.+.......++++++.++.|++.||+++|+...... ......+.+...+........+..+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (399)
T TIGR00893 239 PTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA-RKTAIIAGLVLSLLMFATNYVNIPYAALA 317 (399)
T ss_pred HHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 99999988999999999999999999999999999999999884211111 01111111111222222211223333333
Q ss_pred HHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 428 WLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
...+..+..+ ..+....+..|..|+ ++|++.|
T Consensus 318 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~ 350 (399)
T TIGR00893 318 LVALGFFGLG-AGAIGWALISDNAPGNIAGLTGG 350 (399)
T ss_pred HHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHH
Confidence 3333333333 466777888888874 6887765
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.4e-33 Score=267.46 Aligned_cols=322 Identities=15% Similarity=0.134 Sum_probs=246.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 176 (461)
.|..+..+.+..+............+|.+.+++|.++++.++..+.+.++..+++++.|+++||+|||++++.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 45555555555555555555666778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchh
Q 012519 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 256 (461)
+.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+++|||+
T Consensus 98 ~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFA--NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHH--ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 99999998 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
.|++.++++++..+......||.+++++ +.....++.+++|.++...+..++.
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~---------------------------~~~~~~~~~l~~~~~~~~~~~~~~~ 228 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPS---------------------------HQKQNTFRLLQRPGVMAGMIAIFMS 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcccc---------------------------cchhHHHHHhcCHHHHHHHHHHHHH
Confidence 9999887776655555444555432110 0011345788899998877776776
Q ss_pred HHHHHHHHHhH-HHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHH
Q 012519 337 SWGFFVILSWM-PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (461)
Q Consensus 337 ~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (461)
....+....++ |.|. +.+|+++.+.+......+++.+++.++.+++.||.+++ .+.....+.....+++
T Consensus 229 ~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~---------~l~~~~~~~~~~~~~l 298 (394)
T PRK10213 229 FAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL---------ALAGAPLVLAVSALVL 298 (394)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh---------HHHHHHHHHHHHHHHH
Confidence 66666666776 5555 45699999999999999999999999999999985433 2222222222222222
Q ss_pred HhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccccccc
Q 012519 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGV 457 (461)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 457 (461)
....++.+......++.+...+...+.....+++..|++.+.
T Consensus 299 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 340 (394)
T PRK10213 299 TLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEK 340 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHH
Confidence 223333444444444455555666666666677666765443
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.9e-33 Score=269.37 Aligned_cols=334 Identities=22% Similarity=0.182 Sum_probs=258.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+++|.++.++++..++++++....+...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 36788888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|
T Consensus 91 ~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQA--WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhc---chhhHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS---KMPTWSIIV 331 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 331 (461)
|+.|++.+++.++..++.....||+++..++...++ +++ ...+..++ .+..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~---~~~~~~~~~~~~~~~~~~~~ 227 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK------------------QRA---PVLRALFGEGRATATLLLWI 227 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch------------------hhh---hhHHHHhhhhhhhHHHHHHH
Confidence 999999887777666666666677654221100000 000 01111222 223344445
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH
Q 012519 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (461)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (461)
..++.....+....|+|.|+++ .|+++.+.+.......++.++++++.|++.||+++| + .+..+.+..++
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-------~--~~~~~~~~~~~ 297 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-------R--VVLLIYAGILA 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-------H--HHHHHHHHHHH
Confidence 5555556667778899999988 599999999999999999999999999999999987 2 22223333344
Q ss_pred HHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccCC
Q 012519 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI 461 (461)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl 461 (461)
+++.+...++.+......++.+.+.+...+.......+..| +++|++.|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 348 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGA 348 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhH
Confidence 44444444444333333333333334445666777788877 468887763
No 17
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=2.1e-33 Score=266.68 Aligned_cols=339 Identities=18% Similarity=0.202 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
...+++.++.......+.+..|. +.+++|++..+.+++.+++.+++.+++++.|+++||+|||++++++.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34667777777788889999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccc-cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Q 012519 181 TPWAADT-SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--------- 250 (461)
Q Consensus 181 ~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--------- 250 (461)
++++ + +++.+++.|+++|++.+ ..+...+++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 84 ~~~~--~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 84 AGLA--VQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHH--hhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999 8 99999999999999966 456678999999999999999999998888888888888777665
Q ss_pred -hcCchhHH-HHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHH
Q 012519 251 -QAGIFGPF-VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWS 328 (461)
Q Consensus 251 -~~gwr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (461)
+.+||+.| +..+++..+..++.+...++.|++.++.++.+. .. .....++......++.+++|+++.
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSF-------KG----ARWSVGTGALGDQLKVFRDRHTWI 229 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccc-------cc----ccccccchhHHHHHHHHhccchhh
Confidence 24899999 444555555555555555555533211100000 00 000001111124567888999998
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHH
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (461)
..+..++.....+....+.|.|+++.+|+++.+++.+..+..+.+++++++.|++.||+++| +..........
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~ 302 (366)
T TIGR00886 230 LALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVA 302 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHH
Confidence 88888888888888899999999998999999999999999999999999999999999987 33333333333
Q ss_pred HHHHHHHHhccC--hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccCC
Q 012519 409 PGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGI 461 (461)
Q Consensus 409 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 461 (461)
.+..++...... +....+....+.....+...+..+....++.|+++|+++|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~ 357 (366)
T TIGR00886 303 MGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGL 357 (366)
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHH
Confidence 333333333332 33333444455566667777778888889999999988774
No 18
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=5.1e-33 Score=274.14 Aligned_cols=349 Identities=17% Similarity=0.114 Sum_probs=266.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+..++++.++..++....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
+++++ ++++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.+||+.|+
T Consensus 83 ~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVA--PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCc--CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCC-cchhHH----------HHHHHhhcC-ccccC-------------------CCC
Q 012519 260 IFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYEL----------EYILREKQK-PLLMG-------------------NKH 308 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~-~~~~~-------------------~~~ 308 (461)
+.+.++++..++.++..|+++++.++ .+.... ........+ .+... .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877776666666654432211 111100 000000000 00000 000
Q ss_pred CCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHh
Q 012519 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (461)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (461)
..+++..+ .+++++|+++...+..++..+..+....++|.|+++.+|+++.++++...+..++.+++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 11112222 26789999999988888888888999999999999989999999999999999999999999999999999
Q ss_pred hcCcchhhhHHHHHHHhhHHHHHHHHHHh--cc--ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 389 QRGTSVTLTRKILQSIGFIAPGIALIGLT--AA--KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+| .....+..+.+++...+. .. .+.+......++.+.+.+...+.......+..| +++|+++|
T Consensus 320 ~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 320 PR---------KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred cH---------HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 87 233444444444444333 11 222333333344444444444444444444444 67887765
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6e-33 Score=267.26 Aligned_cols=355 Identities=14% Similarity=0.108 Sum_probs=250.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
++++|+.+..++++++.+.++....++..|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||++++++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
.+++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 87 FSAGTLACGFA--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHh--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred --chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcch-hHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcc--hhhHH
Q 012519 254 --IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISK-YELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK--MPTWS 328 (461)
Q Consensus 254 --wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 328 (461)
||+.|++.++..++.. +.....||+++..+..++ ++.....++..+.... .....+......++..+. +.+..
T Consensus 165 ~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T TIGR00891 165 DGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHR-IANIVMTLAAAMVQSAGKRWPTFVY 242 (405)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchh-hhhhhhhhhHHhhhhhhhhhHHHHH
Confidence 9999988665555443 333444554432111100 0000000000000000 000000000111111111 11223
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHH
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (461)
..+...+..........++|.|+.+.+|++..+.+.+.+...++.+++.++.|++.||+++|+ .+ ..+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~--------~~-~~~~~~ 313 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK--------AY-VCSLLA 313 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh--------hh-HHHHHH
Confidence 333344444555566788999998888999999999999999999999999999999999882 22 222222
Q ss_pred H-HHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccCC
Q 012519 409 P-GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI 461 (461)
Q Consensus 409 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl 461 (461)
. ...+.......+.+......++..++.....+.......+..| +++|+++|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 368 (405)
T TIGR00891 314 GQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGF 368 (405)
T ss_pred HHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhH
Confidence 2 1122222222333322222233333333444556677788887 468887763
No 20
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.2e-32 Score=260.24 Aligned_cols=322 Identities=12% Similarity=0.088 Sum_probs=243.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
++-.++.+.+.+++.++.+.....++++.+.+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.+
T Consensus 29 ~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~l 108 (462)
T PRK15034 29 KHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTA 108 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 3344577888888999999999999999999877 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccc---cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 173 LWSLATFLTPWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (461)
Q Consensus 173 ~~~i~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 249 (461)
+.++.+++.+++. .++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..++++++..+.
T Consensus 109 l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 109 ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999888641 26999999999999998 6688999999999999999999999998777777776666665433
Q ss_pred -----h-------------hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCC
Q 012519 250 -----S-------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPA 311 (461)
Q Consensus 250 -----~-------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (461)
. ..+||.++++.+++.++..++.++..++.++.+
T Consensus 188 ~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~---------------------------- 239 (462)
T PRK15034 188 FVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSR---------------------------- 239 (462)
T ss_pred HHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc----------------------------
Confidence 2 234788888888888777777776655443211
Q ss_pred CCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcC
Q 012519 312 TVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRG 391 (461)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~ 391 (461)
....+.++++|+|+.|.+++.+++.+..+.++..++|+|+++.+ +.........+..+...+.++++|+++||+|++
T Consensus 240 ~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~- 316 (462)
T PRK15034 240 ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV- 316 (462)
T ss_pred cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-
Confidence 11235568999999999999999999999999999999998854 332222233444577888999999999999988
Q ss_pred cchhhhHHHHHHHhhHHHHH-HHHHHhcc---ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc
Q 012519 392 TSVTLTRKILQSIGFIAPGI-ALIGLTAA---KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ 453 (461)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 453 (461)
+........+.... ........ .+.+.....++......+++++..+-++..++|+
T Consensus 317 ------~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 317 ------RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 22222221111111 11111111 1233344444445566777888888777777774
No 21
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=8.3e-33 Score=271.44 Aligned_cols=339 Identities=18% Similarity=0.130 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchh-HHH-----HHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-SGI-----VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~~~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
..+...+++.+++++|...++...|.+.++++.+..+ .++ +.++..++..++++++|+++||+|||+++.++++
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 4667778899999999999999999999998644322 222 2477889999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccHHH--------HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHH
Q 012519 173 LWSLATFLTPWAADTSLLA--------LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (461)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 244 (461)
++++++++++++ +|++. ++++|+++|++.|..++...+++.|++|+++||++.++...+..+|..+|+.+
T Consensus 96 l~~i~~~~~a~~--~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 96 IMSISTFCIGLI--PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 99874 88999999999999999999999999999999999999999988998888877
Q ss_pred HHHHH--------hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh
Q 012519 245 SPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP 316 (461)
Q Consensus 245 ~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (461)
...+. ..+|||+.|++.++++++. ++.....||+|+..... ++..+...+ . ..+....+
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~-----~~~~~~~~~-----~--~~~~~~~~ 240 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHV-----DKLEQGDRE-----G--LQDGPKVS 240 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHH-----Hhhhhhccc-----c--ccccccCC
Confidence 65543 2579999999977655543 33344556665421110 000000000 0 00011234
Q ss_pred HHHHhcc-hhh-HHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcch
Q 012519 317 FRRLLSK-MPT-WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSV 394 (461)
Q Consensus 317 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~ 394 (461)
+++++++ ++. .......++....++....|+|.|+++.+|++..+.++......++.+++.++.|+++||+|||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---- 316 (490)
T PRK10642 241 FKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR---- 316 (490)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH----
Confidence 5566653 232 2233334455677888889999999887899888777777777888899999999999999988
Q ss_pred hhhHHHHHHHhhHHH--HHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 395 TLTRKILQSIGFIAP--GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 395 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
+ .+........ ++.++.....++....+...++...+.+...+....+..+.+|+ .||++.|
T Consensus 317 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g 381 (490)
T PRK10642 317 ---P-FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALA 381 (490)
T ss_pred ---H-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHH
Confidence 2 2222211111 11112222222233333333333344444555566677788875 5887654
No 22
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=253.56 Aligned_cols=335 Identities=18% Similarity=0.207 Sum_probs=280.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
++.+.+.+.+..+...+.++.+.+++++.+.+.+++++|+.|.+++.++..+..++..++.|.+.||||.|++..+++++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 34456677777888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 174 WSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 174 ~~i~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
..+.++..+++. .+++|++++++++.|++.+ ...+....+++|||||++|.++|+.. ..++|..+...++..++...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 999999988882 2456799999999999855 78889999999999999999999999 99999999999999999999
Q ss_pred C---chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCC-hhHHHHhcchhhHH
Q 012519 253 G---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI-PPFRRLLSKMPTWS 328 (461)
Q Consensus 253 g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (461)
+ ||....+..+..++..+..++...|.|+.+...+ +.. .+++.++++++.|.
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~------------------------~~~~~~~~~v~~~~~~W~ 222 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK------------------------PQLPAQLKAVFSNKDTWL 222 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc------------------------ccchhHHHHHhcCcchHH
Confidence 9 9999999999999988888888888776422111 011 45678899999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHH
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (461)
+++.++..+.++.++..++|.|++++||.++.++|.......+.+.+.++++|+++||+|.+ |..+.......
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-------rv~~~~f~~~~ 295 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-------RVTLAVFVGMA 295 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-------hHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988 33333332222
Q ss_pred HHHHHHHHhcc-----ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccCC
Q 012519 409 PGIALIGLTAA-----KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGI 461 (461)
Q Consensus 409 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 461 (461)
.+...+.+... .+....+..++....+.+.+.+..+-.+..++|++.|.+.|+
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~ 353 (417)
T COG2223 296 LAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGI 353 (417)
T ss_pred HHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHH
Confidence 22222222221 234445555666777888889999999999999988887763
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.3e-32 Score=262.97 Aligned_cols=326 Identities=17% Similarity=0.197 Sum_probs=254.4
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 181 (461)
..+....++.......+.+..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33444445566677788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
+++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.
T Consensus 88 ~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 88 ALS--NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred HHH--ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+++.++..+..++..||++++.++.+. +.....+++.+++|+++...+...+.....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR00710 166 SLAGILLSALIFFILPETLPYEARIQI----------------------STYFETFLLLLKSKMFWGYALIYGASFGGFF 223 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcccCCH----------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 888877776666666655432211000 0112345678889999888887777777778
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhc---
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA--- 418 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 418 (461)
....+.|.++++.+|+++.+.+.+.....++.+++.++.|++.||+++| +.... +.....+..+....
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~ 294 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-------SLLRM--GLILFAVSAVLLEITAI 294 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHH--HHHHHHHHHHHHHHHHH
Confidence 8888899999888899999999999999999999999999999999987 22222 22222222211111
Q ss_pred c--ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 419 A--KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 419 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
. ..........++.+...+...+.......|..|+++|++.|
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~ 338 (385)
T TIGR00710 295 LGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASA 338 (385)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHH
Confidence 1 11222222233333444555566666667777877777654
No 24
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.3e-32 Score=261.46 Aligned_cols=324 Identities=15% Similarity=0.122 Sum_probs=246.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 175 (461)
++++..+.+++..++.+......++.+|.+.+++|++.++.+++.+.+.+++.++.++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45567777888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCc
Q 012519 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGI 254 (461)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gw 254 (461)
++.++.+++ ++++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.. ..||
T Consensus 84 i~~~l~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFS--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHc--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 999999999 9999999999999999998889999999999999999999999999999999999999888765 5799
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|+.|++.+++.++..++.++. +.|+..++.+++ ..+.. ++ ..++.++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~----------------~~~~~-------~~-~~~~~~~~~~~~~~ 215 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPKA----------------DKPVA-------KE-KWGIGVLFLAIAAL 215 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCccc----------------cCccc-------cc-cCChHHHHHHHHHH
Confidence 999999888777665544432 222211100000 00000 01 12456777777777
Q ss_pred HHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHH
Q 012519 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (461)
+....++.+..|+|.|+++.+|+++.+++.+.+...++..+++++.|+++||+++|+ .+. .......+.+.
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~--------~l~-~~~~~~~~~~~ 286 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR--------ILT-VLAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh--------HHH-HHHHHHHHHHH
Confidence 777788888999999998888999999999999999999999999999999999882 222 22222333333
Q ss_pred HHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccc
Q 012519 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSG 456 (461)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g 456 (461)
.+...++........+..+++.+..++.......+..|+.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 328 (394)
T PRK03699 287 LFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASP 328 (394)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCH
Confidence 333333333333333333333444445555555566665443
No 25
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=6e-32 Score=262.98 Aligned_cols=293 Identities=18% Similarity=0.222 Sum_probs=226.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
.++++|.++..+.+.....+.+...++...|.+.++ |++..+.+++.+.+.+++++++++.|+++||+|||++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 344556666666677777777777778888999888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccc--cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 012519 173 LWSLATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILM 249 (461)
Q Consensus 173 ~~~i~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~ 249 (461)
+.+++.+++++.. ..+++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|.. .+|+++..+.
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999998887751 137888999999999999998888888999999999999999999999999874 4555544444
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh-HHHHhcchhhHH
Q 012519 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWS 328 (461)
Q Consensus 250 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 328 (461)
...|||+.|++.+++.++..++.+++.||+|++....++++.+ ++..+.... ...++...... .+.++|++.+|.
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 257 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK---NDYPDDYNE-KHEQELTAKQIFMQYVLPNKLLWY 257 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh---hcccccccc-ccCCCccHHHHHHHHHHcChHHHH
Confidence 4459999999998888877777777777776543221111110 000000000 00011111111 234778999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
..+..++.+...+....|+|.|+++..|++..+++....+..++.+++.++.|+++||++++
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 98888888888888899999999998899988888888888899999999999999999543
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4e-32 Score=261.17 Aligned_cols=335 Identities=13% Similarity=0.076 Sum_probs=257.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
+++.+.....+.+..++..+....+.+.+|.+.+++|.+..+.++..+.+.+++.++.++.|+++||+|||++++++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35556777778888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
.+++.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.++.+
T Consensus 88 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLA--QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHH--ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999998 9999999999999999998889999999999999999999999999899999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHH
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (461)
||+.|++.+++.++..+..++..||++++.++.. +.++...++++++++|.++...+..
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL---------------------SLKELGRDYKLVLKNRRFVAGALAL 224 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc---------------------cHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 9999999888887776666555565543211100 0011123556889999999888877
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHH
Q 012519 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (461)
++..........+.|.++.+.+|+++.+.+.......++.+++.++.+++.||+++| + .+.++.+..++++
T Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-------~--~~~~~~~~~~~g~ 295 (406)
T PRK15402 225 GLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR-------S--LIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------H--HHHHHHHHHHHHH
Confidence 777776677777889998888899998888887777788899999999999999887 2 2223333333322
Q ss_pred HHHhc-----cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 414 IGLTA-----AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 414 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
..... ..+.++.....++.+.+.+...+..........|+++|++.|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~ 347 (406)
T PRK15402 296 LLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSA 347 (406)
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHH
Confidence 22211 122333333333344444444444444444445567777654
No 27
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.3e-33 Score=266.54 Aligned_cols=332 Identities=27% Similarity=0.387 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHhhhHhhhh-hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc
Q 012519 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 183 (461)
+++.++...+.....+.+| .+.+++|.+..+++++.+++.++..++.++.|+++||+|||++++++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 5667777888888889999 899999999999999999999999999999999999999999999999999999777767
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 263 (461)
+ ++++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+.++.+||+.|++.++
T Consensus 82 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 A--SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred h--hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 7 78889999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh-HHHHhcchhhHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWSIIVANAMHSWGFFV 342 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (461)
+.++..++.....++++++++..++++.+ ++.+....+ ++.++++|.+|...+..++..+....
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE---------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG 224 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT-----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc---------------cccccccccccccccccchhhhhhhhhhHHHHHHHH
Confidence 99888775555555544433322111110 001111122 55777888887666666666678888
Q ss_pred HHHhHHHHHHHhhCCC-ccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHh-hHHHHHHHHHHhccC
Q 012519 343 ILSWMPIYFNFVYHID-LRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG-FIAPGIALIGLTAAK 420 (461)
Q Consensus 343 ~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 420 (461)
...++|.|+++.+|++ ..+.+.+..+..+.+.++.++.|++.||++++ +....... .....+.+......+
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSS 297 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHC
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988888999 78889899999999999999999999999876 22222222 222222222222223
Q ss_pred hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+....+...++.+.+.+...+.......+..| +++|++.|
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 338 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFG 338 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34444444555555777778888888888887 56887765
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=8.5e-33 Score=263.47 Aligned_cols=323 Identities=18% Similarity=0.173 Sum_probs=244.8
Q ss_pred HHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc
Q 012519 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 184 (461)
.+...+.......+++..|.+.+++|++.++.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 9 TVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 33333344446678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 012519 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 185 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
++++.++++|++.|++.+..++.....+.+++| ++|+++.++...+..+|..+++++.+.+.+..|||+.|++.+++
T Consensus 89 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 89 --DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred --HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999999999888888889999997 68999999999999999988887888888888999999999998
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHH
Q 012519 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (461)
.++..+..++..++++++..+.+ .+.+....+.++.++++.++...+..++.........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTN--------------------IEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLI 225 (377)
T ss_pred HHHHHHHHHHheecCchhccccC--------------------cccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHH
Confidence 88877776666655443211100 0000111245678889998888777777766666666
Q ss_pred HhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh--h
Q 012519 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS--P 422 (461)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 422 (461)
.+.+.|.++ +|.+..+.+.+.....++.++++++.|++.||++||+ .+..+.+..+++.+.....+. .
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 295 (377)
T TIGR00890 226 GLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK---------TMSIVFGISAVGMAAMLFIPMLND 295 (377)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hhhHHHHHHHHHHHHHHHcccchh
Confidence 777777766 6888888889999999999999999999999999882 223333344444333333332 1
Q ss_pred HHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
...+...++.+...+...+....+..|..| +++|++.|
T Consensus 296 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g 334 (377)
T TIGR00890 296 VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYG 334 (377)
T ss_pred HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhH
Confidence 222222233333444444555667778776 56888766
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.4e-32 Score=263.59 Aligned_cols=342 Identities=15% Similarity=0.153 Sum_probs=245.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+.++..+..+.++++.+.++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||++++++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34556677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+++.++++++ ++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..+|
T Consensus 94 ~~~~~~~~~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLA--SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|+.|++.++..++ .+......||+++.. + ++..+. .+ ......+....+++++++++.++.......
T Consensus 172 ~~~f~i~~~~~~~-~~~~~~~~p~~~~~~------~-~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
T PRK12307 172 RAAFFVGLLPVLL-VIYIRARAPESKEWE------E-AKLSGK-GK----HSQSAWSVFSLSMKGLFNRAQFPLTLCVFI 238 (426)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCCCChHHH------H-hhhhcc-cc----ccccchhhhhHHHHHHHhhchHHHHHHHHH
Confidence 9999885443322 221111222221100 0 000000 00 000011111235678888887765443322
Q ss_pred ---HHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH
Q 012519 335 ---MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (461)
Q Consensus 335 ---~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (461)
......+.+..++|.|+++ .|+++...+.......++.+++.++.|++.||+++| + ....+.+..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-------~--~~~~~~~~~~~ 308 (426)
T PRK12307 239 VLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-------K--TFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-------H--HHHHHHHHHHH
Confidence 2233334467789999988 499988889888999999999999999999999987 2 22233333333
Q ss_pred HHHHHhc-cChhHHHHHHHHHHHHHHh-hhhhchhHhhhhhccc-ccccccCC
Q 012519 412 ALIGLTA-AKSPVMASAWLTLAIGMKS-FSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 412 ~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
..+.... .......+...+++.+... ...+.......|..|+ .+|+++|+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 361 (426)
T PRK12307 309 FIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGL 361 (426)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhH
Confidence 3222221 2222222222222222211 1223445666788875 58888763
No 30
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=258.68 Aligned_cols=331 Identities=15% Similarity=0.114 Sum_probs=249.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 176 (461)
....+..+.+..++..+.....++..|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34456667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-h-
Q 012519 177 ATFLT---PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-Q- 251 (461)
Q Consensus 177 ~~~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~- 251 (461)
+.+++ .++ ++++.++++|+++|+|.|...+..++++.|+.|+++|+..+++.+..+.+|..+|+.+++.+.. .
T Consensus 104 ~~~l~~~~~~a--~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEI--MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875 456 8999999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred ------------------------cCchhHHHHHHHHHH-HHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCC
Q 012519 252 ------------------------AGIFGPFVIFGLSGF-LWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN 306 (461)
Q Consensus 252 ------------------------~gwr~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (461)
.+||++|+....+.. +..++.....||.+++++ .
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~---------------------~ 240 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---------------------S 240 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---------------------c
Confidence 256666765443333 322222222233211100 0
Q ss_pred CCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHH-HHhhCCCccccchhhhhhHHHHHHHHHHHHHhhh
Q 012519 307 KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF-NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (461)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (461)
.++........++++++|.++...+..++..........|.+.|+ ++.+|+++.++++.+....++.++++++++++.|
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~ 320 (438)
T PRK10133 241 DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS 320 (438)
T ss_pred cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111223456889999988887777888888888888999885 5667999999999999999999999999999999
Q ss_pred hHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
|+++| + .+ ..+.++....+++....+.. ..+..+.+.+++.+..++..++...+..|++.+++.|
T Consensus 321 r~g~~-------~-~l-~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~ 385 (438)
T PRK10133 321 RFAPH-------K-VL-AAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSS 385 (438)
T ss_pred HcCHH-------H-HH-HHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchh
Confidence 99988 2 22 22222222222222222222 2344555667777788888888888888877666654
No 31
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=7.6e-32 Score=255.78 Aligned_cols=329 Identities=14% Similarity=0.098 Sum_probs=256.0
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 183 (461)
+.++.++.........+.+|.+..+++.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++..++.++.++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34566667777778888889999999999999999999999999999999999999999999999999999988888877
Q ss_pred cccc-----cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHH
Q 012519 184 AADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (461)
Q Consensus 184 ~~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 258 (461)
. + +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||.+++.+.+..|||+.|
T Consensus 84 ~--~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 84 V--ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred H--HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 7 6 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHH
Q 012519 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (461)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (461)
++.++..++..++.+...++++++.+..+.++ + . .++....++.++++|.++...+..++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPELAASEIQALSN-A-V---------------LRDTREGIKFVLKNPLLRTLLLLALLFNL 224 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCccccccch-h-H---------------HHHHHhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99887766655544443322221111100000 0 0 00011345678889999988888888777
Q ss_pred HHHHHH-HhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh
Q 012519 339 GFFVIL-SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (461)
Q Consensus 339 ~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (461)
...... .+.|.|.++.+|.+..+.+.+.....++.+++.++.+++.||.+++ .....+....++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 225 VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHH
Confidence 777666 8899999887899999999999999999999999999999999877 233333444444444444
Q ss_pred ccCh-hHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 418 AAKS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 418 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
..++ .+...+..++.+.+.+...+....+..+..| +++|++.|
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (365)
T TIGR00900 296 LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFG 340 (365)
T ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4432 4444444455555566666777778888876 46887765
No 32
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.1e-32 Score=259.24 Aligned_cols=261 Identities=13% Similarity=0.196 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
|.....++.+.+.... ....++.+|.+++|+|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..++.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 9 FMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 3444444444443322 257789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-Cchh
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFG 256 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~ 256 (461)
.++++++ ++++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++.+.++. +||+
T Consensus 88 ~~~~~~a--~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 88 ALMRELY--PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHC--cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 9999999 999999999999999999999999999999997 88999999999999999999999999998875 8999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
.+.+.++..++..+..+...++.|++++ + ++. ..++.+++++.|...+..++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~--~~~----~~~~~l~~~~~~~l~~~~~~~ 217 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVASSH---------------------K--TTT----TPVRVVFTPRAWTLGVYFGLI 217 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccc---------------------C--CCc----CCcccccCHhHHHHHHHHHHH
Confidence 9887766655444433333232222110 0 000 112455678888887777778
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
...++....|+|.|+++ +|++..+++...++..++.++++++.+++.||.++|
T Consensus 218 ~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 218 NGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred HHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 88888899999999988 699999999999999999999999999999999887
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=8.8e-33 Score=263.57 Aligned_cols=280 Identities=19% Similarity=0.228 Sum_probs=231.3
Q ss_pred HHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 012519 106 LALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 185 (461)
+.++..+.+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~- 80 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS- 80 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-
Confidence 3466777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCchhHHHHHHHH
Q 012519 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL-VLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 186 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++
T Consensus 81 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (379)
T TIGR00881 81 -TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGII 159 (379)
T ss_pred -hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 5777777888999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHH
Q 012519 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (461)
.++..++.++..+|++++.+..+.++.. ..+ .+....+.+++........++++++|.++...+..++.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMP-NEE--PDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL 236 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCc-ccc--cccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 8777776666667665433211111100 000 0000000111111222345678899999999988888888888999
Q ss_pred HhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+.|.|+++.+|+++.+.+.......++.+++.++.+++.||..++
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 9999999988899999999999999999999999999999987544
No 34
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.4e-31 Score=256.73 Aligned_cols=263 Identities=16% Similarity=0.119 Sum_probs=222.7
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 181 (461)
..+.+..+...+....+.+.+|.+.++++.+..+.++..+++.++++++++++|+++||+|||++++.+.++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 33455556677777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
+++ ++++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||++++.+.++.|||+.|++.
T Consensus 99 ~~a--~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~ 176 (413)
T PRK15403 99 LFT--TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAII 176 (413)
T ss_pred HHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 999 999999999999999988777788889999999999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+++.++..+..++..||++++.++. ...+....++++++|||.++...+..++.....+
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~~~~~~---------------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 235 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVKRGAVP---------------------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMM 235 (413)
T ss_pred HHHHHHHHHHHHHhCCCCccccCCC---------------------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 9888877666565566654321100 0001112466788999999998888888888888
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhH
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 387 (461)
.+..+.|.++++.+|+++.+.++.......+.+++..+.+.+.++.
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8888999999998899999999988777777788777777665443
No 35
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.9e-31 Score=256.78 Aligned_cols=336 Identities=14% Similarity=0.061 Sum_probs=233.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhh-hhhhc--CCCchhHHHHH-----HHHHHHHHHhHhhhhhhhhhhcchH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVP-LSLAH--GWSRSFSGIVQ-----SSFLWGYLVSPIAGGTLVDYYGGKI 165 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~ 165 (461)
-.++++.+....++.+++++|...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 3444567788888999999999999988775 55555 66665 45554 3455667899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccHH--------HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHH
Q 012519 166 IMAWGVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (461)
Q Consensus 166 ~~~~~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 237 (461)
+++++.+++++++++++++ ++++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+|
T Consensus 96 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999 8877 58889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--------hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCC
Q 012519 238 NAIGLVLSPILMS--------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (461)
Q Consensus 238 ~~~g~~~~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (461)
..++..+...+.. .+|||+.|++.+++.++. +......||+|+..+ .+ .+. + +
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~------~~---~~~-------~--~ 234 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQ------QQ---HEQ-------A--A 234 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHH------HH---hhc-------c--c
Confidence 9999887776653 579999999887765442 222223344432110 00 000 0 0
Q ss_pred CCCCChhHHHHhcchhhHHHHH-HHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHh
Q 012519 310 PATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (461)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (461)
.+......+.++++|+.+...+ ..++..+..+....|.|.|+++.+|++...........++...++.++.|+++||++
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~g 314 (438)
T PRK09952 235 AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFG 314 (438)
T ss_pred ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0001112334667777666544 455556677788899999998888888765555555666777888899999999999
Q ss_pred hcCcchhhhHHHHHHHhhHHHHHHHH--HH-hcc-ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 389 QRGTSVTLTRKILQSIGFIAPGIALI--GL-TAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
|| + .+. .+.+...+..+ .. ... +.....+...++..+..+...+..+.+..|.+|. .|+++.|
T Consensus 315 rr-------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g 382 (438)
T PRK09952 315 RR-------R-VYI-TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAG 382 (438)
T ss_pred ch-------H-HHH-HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHh
Confidence 88 2 222 22222222211 11 112 2222222233334445555566778888998885 5766554
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.1e-31 Score=253.77 Aligned_cols=262 Identities=19% Similarity=0.186 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+....+..+..........+.+|.+.+|+|.+..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34555667777777777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
+++++ +|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+..|||+.|+
T Consensus 84 l~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 84 MFTLS--SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHHh--CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 99999 9999999999999999998888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHH
Q 012519 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (461)
+.+++.++..+..++..||.+++.+. + .... .+.++++..|...+..++....
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~~~~----~----------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~ 214 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDEAKG----G----------------------LREQ-FHFLRSPAPWLIFAATMFGNAG 214 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccc----C----------------------HHHH-HHHhcChHHHHHHHHHHHHHHH
Confidence 99988777666656556664321110 0 0011 2456777777766666655555
Q ss_pred HHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+....+++.++.+.+|+++.+.+++.....++.++++++.+++.||++++
T Consensus 215 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~ 265 (382)
T PRK10091 215 VFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL 265 (382)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch
Confidence 566667778888877899999999999999999999999999999999887
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.4e-32 Score=263.44 Aligned_cols=355 Identities=16% Similarity=0.117 Sum_probs=255.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
.++|.++..+.+...........++..+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 34577777777777766666677888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHH-HHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 175 SLATFLTPWAADTSLLALLA-MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
+++.++++++ ++++.+++ .|+++|++.+...+...+++.++++ ++|++++++...+..+|..++|++++.+.+.+|
T Consensus 95 ~~~~~~~~~~--~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 95 SLGMILASFS--SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 9999999999 99998875 5799999999777788888999995 789999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCcc-ccCCCCCCCCCChhHHHHhcchhhHHHHHH
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL-LMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (461)
||+.|++.+++.++..+..++..++.+.++....+++ +.......... ......++.....++ +++++|+++...+.
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 249 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-EGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSG 249 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-ccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHH
Confidence 9999999998887666555555443221110000000 00000000000 000000000011122 57889999988888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHH
Q 012519 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (461)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (461)
.++.....+....++|.|+++ .|++..+++.+.++.+++.++++++.|++.||...++. ++..+..+.+..++.
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~ 323 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLT 323 (455)
T ss_pred HHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHH
Confidence 888888888888899999987 69999999999999999999999999999997422100 223333333333443
Q ss_pred HHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 413 LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
++.....++.+..+...++.+...+...+.......+..| +++|++.|
T Consensus 324 ~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g 372 (455)
T TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVG 372 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHh
Confidence 3333334444444444444445555555666677777765 46787765
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.2e-31 Score=256.62 Aligned_cols=331 Identities=15% Similarity=0.102 Sum_probs=230.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHH-HHH-----HHHHHHhHhhhhhhhhhhcchHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQ-SSF-----LWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~-s~~-----~~~~~~~~~~~g~l~dr~Grr~~~~~~ 170 (461)
+++....++++.+++++|...+++..|.+.++++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45578888999999999999999999999999998887765443 322 233347889999999999999999999
Q ss_pred HHHHHHHHHHhhccccccHH--------HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHH
Q 012519 171 VALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (461)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 242 (461)
.++++++.++++++ ++++ .++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++
T Consensus 93 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFV--PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8877 4688999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCC
Q 012519 243 VLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI 314 (461)
Q Consensus 243 ~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (461)
.+++.+. +.+|||+.|++..+...+ . ++. ++.+++.+ +..++ . +. .+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~---~~~-~~~~~e~~----~~~~~---~--------~~---~~~~ 227 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-I---FLI-RRSLEETE----EFLAR---K--------HR---PSMR 227 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-H---HHH-HHhcCCCH----HHHHh---h--------hc---cccc
Confidence 8887763 467999999875443211 1 111 11111110 00000 0 00 0011
Q ss_pred hhHHHHhcchhhHHH-HHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcc
Q 012519 315 PPFRRLLSKMPTWSI-IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (461)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (461)
..++...++++.+.. ++..++....++....|.|.|+++.+|++..+.++...+..++++++.++.|+++||++||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-- 305 (434)
T PRK15075 228 EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP-- 305 (434)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--
Confidence 224444556555543 33344455667778899999999888999888888888888999999999999999999882
Q ss_pred hhhhHHHHHHHhhHHHHHHHH---HHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 394 VTLTRKILQSIGFIAPGIALI---GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
............... .....++........++...+.+...+....+..|..|+ +||++.|
T Consensus 306 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g 370 (434)
T PRK15075 306 ------VLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFS 370 (434)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhee
Confidence 222221111111111 111122222222222233334445555566777888875 5888765
No 39
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.2e-31 Score=257.44 Aligned_cols=354 Identities=20% Similarity=0.232 Sum_probs=258.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
++++..+..+.+..+...++.....+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34566667777778888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+++.++.++. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALA--TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHc--cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHh----hcCccc--cCCCCCCCCCChh-HHHHhcc---h
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILRE----KQKPLL--MGNKHKPATVIPP-FRRLLSK---M 324 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~-~~~~~~~---~ 324 (461)
|+.|++.+++.++..++.+...|++++.....++++..+..++ ...... ..+.+.+...... .+.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 9999998777776666666666776542211111111111110 000000 0000011111111 2223332 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHH
Q 012519 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (461)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (461)
..+.+.+..++.....+....+.|.+.++ +|+++.+.+.......++.+++.++.+++.||+++| .....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~ 320 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALL 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHH
Confidence 44455555666666777778888855554 699999999999999999999999999999999876 12122
Q ss_pred hhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 405 GFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
..+.............+........++.+.+.+...+....+..+..|+ ++|++.|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 377 (398)
T TIGR00895 321 LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVG 377 (398)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2222222222222233444444455555566666677788888888874 5887765
No 40
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-34 Score=256.49 Aligned_cols=352 Identities=17% Similarity=0.191 Sum_probs=271.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
.+..++.+.++++...++..|.+.+....+.+++.||++++..|++.+.+.+.+++++|++|+++|||.||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34556788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
+.++.++++++ ..||+++++|.+.|+|.+...++++++++|.+|..+|++++++++.+..+|..+|.+.+..+.+..+
T Consensus 108 W~~Av~~~~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 108 WTLAVFASGFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred -chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHH
Q 012519 254 -IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (461)
Q Consensus 254 -wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (461)
|||.|++.+++++++.++.+++.+|+++..+...+.+ .+........+++.+...+++.+....+.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~-------------~~~~~~~ts~~kDl~~l~~~~v~v~~sl~ 252 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGE-------------NKMVKPFTSVWKDLKVLAKIKVFVLSSLG 252 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccC-------------CcCCCCccchHHHHHHHHccCceeeehHH
Confidence 9999999999999999999998888765422111100 00112334456778888888888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHh---hCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhh--hHHHHHHHhhH
Q 012519 333 NAMHSWGFFVILSWMPIYFNFV---YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTL--TRKILQSIGFI 407 (461)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~--~~~~~~~~~~~ 407 (461)
.....+...++..|.|.++..- .|++..+..++..+...++.+|.+++|.++||+.++.++.-. ........+..
T Consensus 253 ~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~ 332 (493)
T KOG1330|consen 253 IIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAP 332 (493)
T ss_pred HHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhh
Confidence 8888877777777777766543 356666777788888899999999999999998764322111 11122233333
Q ss_pred HHHHHHHHHhccCh--hHHHHHHHHHHHHHHhhhhhchhHhhhhhc-ccccccccC
Q 012519 408 APGIALIGLTAAKS--PVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHG 460 (461)
Q Consensus 408 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g 460 (461)
.....+.++..... .+..+++++++....-+..+.......++. |++|.++..
T Consensus 333 ~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a 388 (493)
T KOG1330|consen 333 LSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYA 388 (493)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHH
Confidence 33334443333322 233333334444444444445455555555 466776643
No 41
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=9.1e-31 Score=256.78 Aligned_cols=349 Identities=13% Similarity=0.081 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+++++++.++..++...+.+.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34566777888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
+++++ ++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|+
T Consensus 91 ~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALS--GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHh--CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 99888 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHH----------HHhhcC-ccc------------------cCCCCCC
Q 012519 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI----------LREKQK-PLL------------------MGNKHKP 310 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~------------------~~~~~~~ 310 (461)
+......+..+......|+.+...++.+....... ...... .+. ..+++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98887777666666665554433222221110000 000000 000 0000111
Q ss_pred CCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
+.+..+. +++|||+++...+..++..........+.|.|++..+|.++.++++......++.+++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1222333 588999999988888888888777788899999987899999999999888888888889999999999987
Q ss_pred CcchhhhHHHHHHHhhHHHHHHHHHHhcc--Ch-hHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 391 GTSVTLTRKILQSIGFIAPGIALIGLTAA--KS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+ ++..+..+.++....+... .. .+......++.+.+.+...+.......+..| +.+|.++|
T Consensus 328 -------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 328 -------R--VLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred -------H--HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHH
Confidence 2 2233333333332222221 12 2212222233334445555566666666666 55777654
No 42
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=2.2e-30 Score=248.10 Aligned_cols=330 Identities=16% Similarity=0.141 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 176 (461)
.++.+.+..+..++..+....+.+.+|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34455555555556666777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchh
Q 012519 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 256 (461)
+.+++.++ ++++.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFA--HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHH--ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 99999888 9999999999999999998888888999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
.|++.++..++..++..+..||++++.++. .....++++.+++|+++...+..+..
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARR------------------------TRVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccch------------------------hHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 999988877766655555566654321110 00123566788898888776666666
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
.........+.+.++++.+|+++.+.+++.....++.+++.++.+++.||.+++ ............+.+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~ 291 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIP 291 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Confidence 666666677788899888899998888888887788888888888888888743 122112222222222211
Q ss_pred hc--cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 417 TA--AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 417 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
.. ..+.+......++.+.+.+...+.......+..|+++|++.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (394)
T PRK11652 292 GWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGA 337 (394)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 11 123333344444555555666777777778888887777654
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=6.2e-31 Score=250.68 Aligned_cols=318 Identities=15% Similarity=0.185 Sum_probs=244.5
Q ss_pred HHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHH
Q 012519 114 DRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALL 193 (461)
Q Consensus 114 ~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 193 (461)
...++.+.+|.+.+++|+++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++ ++++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (461)
+.|+++|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..++..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888877766666
Q ss_pred HhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 012519 274 SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
+..||++++.++.+ .+.+....++++.+++|.++...+..++.....+....+.|.++.+
T Consensus 164 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (377)
T PRK11102 164 FFIPETLPKERRQP--------------------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIE 223 (377)
T ss_pred HhCCccCcccccCC--------------------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 66666543211100 0001112355678889988888777777777777778888888888
Q ss_pred hhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhh-HHHHHHHHHHhccC-hhHHHHHHHHH
Q 012519 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPGIALIGLTAAK-SPVMASAWLTL 431 (461)
Q Consensus 354 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 431 (461)
.+|+++.+.+.+.....++.+++.++.|++.||+++| +........ ...++.+......+ ..+.......+
T Consensus 224 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T PRK11102 224 LNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-------NMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAA 296 (377)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 8899999999999999999999999999999999988 222221111 11222222221111 22222222223
Q ss_pred HHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 432 AIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
..+..+...........+..|+++|++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 325 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPHMAGTASS 325 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccccchHHHH
Confidence 33333333444455566777877777654
No 44
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.4e-30 Score=250.83 Aligned_cols=289 Identities=19% Similarity=0.243 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 176 (461)
++..+..+.+.+...+.+...+....|.+.+ +|.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4566677777777777777777888888776 599999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccc--cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC
Q 012519 177 ATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAG 253 (461)
Q Consensus 177 ~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~g 253 (461)
+.++.++.+ .++++.+++.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+.+.+.+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 988876641 14678888999999999999999999999999999999999999999999999999888776544 578
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh-HHHHhcchhhHHHHHH
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWSIIVA 332 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 332 (461)
||+.|++.++++++..+..+++.||+|++.+..+.++.+ ++..... .++.+.+...... .+.+++++.+|...+.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR---NDYPDDY-NEKAEQELTAKEIFMQYVLPNKLLWYIAIA 259 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc---ccccccc-ccccccccchHHHHHHHHccCchHHHHHHH
Confidence 999999999988887776667777765432111100000 0000000 0000000011111 2347889999998888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.++.....+....|+|.|+++..|+++.++++...+..+.++++.+++|++.||++++
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8888888888899999999998899999999999999999999999999999999755
No 45
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-31 Score=250.47 Aligned_cols=296 Identities=19% Similarity=0.237 Sum_probs=254.8
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHhhhH-hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHH
Q 012519 89 FLEFITSERVKVVSMLALALALCNADRVVMS-VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM 167 (461)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 167 (461)
.+...++-.+.++..++..++....+...++ ..+..+.+|.+....+.+++.+++.++++++.+++|.+.||++..+.+
T Consensus 35 ~~~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l 114 (495)
T KOG2533|consen 35 ERKLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL 114 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH
Confidence 3344455567777788888888888876664 345557899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 168 AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (461)
Q Consensus 168 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 247 (461)
....+++++..++.... +|++.+++.|++.|+..+..+|....+++.|+.+++|+..++++.+..++|.++|.+++..
T Consensus 115 ~~~~~~w~~~~~~~~~~--~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 115 SVSGILWGLFGFLTAAV--HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred HHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 99999999988888778 9999999999999999999999999999999999999999999999999999999999988
Q ss_pred HH------hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHh
Q 012519 248 LM------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLL 321 (461)
Q Consensus 248 l~------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (461)
+. ...||||.|++.++++++..++.++.+|+.|++.+-..++|.....++.++.. ....+++..+..+++.+
T Consensus 193 ~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~--~~~~~~~~~~~~~~~a~ 270 (495)
T KOG2533|consen 193 VFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESP--SGGIENKFKWKGFKEAL 270 (495)
T ss_pred hhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhcc--CCCcccccCHHHHHHHH
Confidence 63 35689999999999999999999999999999876666666443333222211 11111225667889999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHh
Q 012519 322 SKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (461)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (461)
++|.+|...+..++.....+++.+|+|.|+++..|++..+++.+..+..++++++.+++|+++||++
T Consensus 271 ~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 271 KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999965799999999999999999999999999999963
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=3.9e-30 Score=246.26 Aligned_cols=264 Identities=16% Similarity=0.112 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 181 (461)
.+..+..+........+.+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||++++.+.++..++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 34444555555555666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
.++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..|||+.|++.
T Consensus 86 ~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 86 SLA--ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred HHh--CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+++.++..++.+...||+++++++. +....+..++.+++++++...+...+......
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPARAPA-----------------------ASSKPRENSESLLNRFFLSRLVITTLSVTVIL 220 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCC-----------------------ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 9888877776666666654321100 00111234567788887776665555555555
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
....+.|.++++.+|+++.+.+.+.....++.+++.++.+++.||+++|
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~ 269 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR 269 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 6667778888888899998999999999999999999999999999987
No 47
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=9.4e-30 Score=244.39 Aligned_cols=322 Identities=19% Similarity=0.125 Sum_probs=243.2
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 183 (461)
+.+...+..+....+.+.+|.+.+++|.++++.+++.+++.++..++.+++|+++||+|||+++..+.++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 33334445566677888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 263 (461)
+ ++++.+++.|+++|++.+...+...+++.|++|+++++++.+.......+|..++|.+++.+.++.|||+.|++.++
T Consensus 91 ~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~ 168 (401)
T PRK11043 91 V--ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFA 168 (401)
T ss_pred h--cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 9 99999999999999998888888889999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
+.++..+..++..++++++ ++ +....++++++++|+++...+...+....++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (401)
T PRK11043 169 ITLLLILPTLRLKPSKKAR-KQ-------------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAW 222 (401)
T ss_pred HHHHHHHHHHHcCCCCCcc-cc-------------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 8877666555543332211 10 001135668888988887666666666667777
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh--ccCh
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT--AAKS 421 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 421 (461)
..+.|.++++ +|+++.+.++......++.+++.++.+++.||+++|+. .........+....+.... ..+.
T Consensus 223 ~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (401)
T PRK11043 223 LTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL------LPWLLVLFAVSVIAIWLASLLSHPS 295 (401)
T ss_pred HHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH------HHHHHHHHHHHHHHHHHHHHhccCc
Confidence 8889998877 69999889988888788889999999999999987721 0111111112222221111 1223
Q ss_pred hHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
....+....+..+..+...+.......+..|+++|++.|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 334 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAA 334 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHH
Confidence 333333333444455555566566666667888887765
No 48
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.8e-30 Score=245.15 Aligned_cols=319 Identities=17% Similarity=0.094 Sum_probs=237.2
Q ss_pred HHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHH-HHHHHHHHHHHhhc
Q 012519 106 LALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPW 183 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~ 183 (461)
+.+++..+......+.+|. +.+++|.+..+.|++.+++.+...+.+++.|+++||+||||.+++ +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456666666777777776 578899999999999999999999999999999999999887654 56666677788888
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA--VAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
+ ++++.+++.|+++|.+.+...|...+++.|+.|+++|+++ .++...+.++|..+||++++.+.+..|||+.|++.
T Consensus 84 ~--~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 N--RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred c--chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 8 9999999999999988888888888999999887777654 67888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+++.++..++.++..||.|++.++.. ...+.++.+++|+++...+..++......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGAL-------------------------TRLEVRGLLASRDTRLLFVACTLMWGCNI 216 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCccccc-------------------------CcchhhhhhcCcchHHHHHHHHHHHHHHH
Confidence 98888777777766776554321100 00123346677777766666666555556
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (461)
....++|.|+++.+|.++.+.+.+.....+..+++.++.|++.||+++|+ .+ ..+.+...+........++
T Consensus 217 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~--------~~-~~~~~~~~~~~~~~~~~~~ 287 (375)
T TIGR00899 217 LYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR--------LM-LLAALAGVAFYTGLAADNS 287 (375)
T ss_pred HHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh--------HH-HHHHHHHHHHHHHHHHHHH
Confidence 66778899998888999999988887777778888999999999999882 22 2222333333333333334
Q ss_pred hHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
.+......++.+.+.+...+....+.++..|+++++++|
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATT 326 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Confidence 443333334444445555666677788888887776654
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=5.3e-30 Score=245.69 Aligned_cols=267 Identities=12% Similarity=0.044 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
...++.++...........++.+.+++|.++.+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++.
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~ 96 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI 96 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 33444444444433444456667789999999999999999999999999999999999999999999999998876543
Q ss_pred ---ccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCchhHH
Q 012519 183 ---WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN-AIGLVLSPILMSQAGIFGPF 258 (461)
Q Consensus 183 ---~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~gwr~~f 258 (461)
+. .++++.+++.|+++|++.+...+...+.+.+++|+++|++++|+.+++.++|. .++|++++.+.+.+||+..+
T Consensus 97 ~~~~~-~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~ 175 (402)
T TIGR00897 97 VFGLG-HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTL 175 (402)
T ss_pred HHhcc-CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 22 15788999999999999988888888889999999999999999999999997 68999999998888987776
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHH
Q 012519 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (461)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (461)
+......++..++.++..++.+++.+..++ .+.++....+++++|+|.++...+..++...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T TIGR00897 176 WSALAFVLTGGVIALFSNKDIFTPQHMQTR-------------------EKFSELGKAATILFTNPNVLLGGMVRIINTI 236 (402)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcccccCC-------------------cchhhHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 665544444444444444443221110000 0001112346678999999988888888888
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
..+...++.|.|+++ +|++..+.+.......++..++.++.|+++||+++|
T Consensus 237 ~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 287 (402)
T TIGR00897 237 GLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 888899999999977 799999988888888999999999999999999977
No 50
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.3e-30 Score=252.00 Aligned_cols=354 Identities=14% Similarity=0.097 Sum_probs=237.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhc-----CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-----GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 168 (461)
.+.++.++.++.++.+.++++....+.+.|.+.+++ +.+..+.+++.+.+.++..++.+++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 456777888899999999999999999988887652 345667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccc------HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHH
Q 012519 169 WGVALWSLATFLTPWAADTS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (461)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 242 (461)
+++++..++.++++++ ++ ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|.++++
T Consensus 91 ~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 91 MELIIMIIATVASGLS--PGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHc--cCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887 54 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-----------------------hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC--CcchhHHHH-HHH
Q 012519 243 VLSPILMS-----------------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP--QISKYELEY-ILR 296 (461)
Q Consensus 243 ~~~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~ 296 (461)
.++..+.. ..+||+.|.+.++++++..+ ..+..||+|+... ..++++..+ ..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 98876542 23799999887777665444 4556799987421 111111111 111
Q ss_pred hhcCcc--ccCC----CCCCCCCChhHHHHhcc---hh----hHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccc
Q 012519 297 EKQKPL--LMGN----KHKPATVIPPFRRLLSK---MP----TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQAS 363 (461)
Q Consensus 297 ~~~~~~--~~~~----~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 363 (461)
...... ..++ .++++....++++++++ ++ ++......+...+.+++...|.|.++++ .|++....+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~ 326 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAAT 326 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccc
Confidence 111000 0000 00011112356666653 22 1222233444455666777889999976 588765432
Q ss_pred h------------hhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc--C-hhHHHHHH
Q 012519 364 W------------FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA--K-SPVMASAW 428 (461)
Q Consensus 364 ~------------~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~ 428 (461)
. ...+..++.+++.++.++++||+||| + ++..+..+.++++.++... . ........
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-------~--~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 397 (502)
T TIGR00887 327 NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-------P--IQLMGFFILTVLFFVLGFAYNHLSTHGFLAI 397 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-------h--HHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 2 12333456677889999999999998 2 2222333333322222211 1 11111111
Q ss_pred HHHHHHHHhh-hhhchhHhhhhhccc-ccccccC
Q 012519 429 LTLAIGMKSF-SHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 429 ~~~~~~~~~~-~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
.++..++.+. ..+..+.+..|++|. .|+++.|
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g 431 (502)
T TIGR00887 398 YVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHG 431 (502)
T ss_pred HHHHHHHHhcCCCchhhhhhhccCchhHHHHHHH
Confidence 1122222222 234566778899985 4888766
No 51
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=1.5e-29 Score=249.93 Aligned_cols=347 Identities=15% Similarity=0.135 Sum_probs=237.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+++++.+..++++.+++.++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45667888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+++.++.+++ ++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.++.+|
T Consensus 96 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFA--PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc-chhHHHHHHHhhcCccccCCCCCCCCCChh---------HHHHh---
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPP---------FRRLL--- 321 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--- 321 (461)
|+.|++.++..++ .++.....|+.++..++. ..++.+...+.... .++..... ....+
T Consensus 174 ~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T PRK03893 174 RALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYR--------GEHRIINILLTLAAAAALWFCFAGN 244 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHhc--------chhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999875443332 223333334433211100 00000000000000 00000000 00000
Q ss_pred ----------------------------cchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHH
Q 012519 322 ----------------------------SKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (461)
Q Consensus 322 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (461)
+.+......+..+......+....++|.|+++.+|++..+++.+.+...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~ 324 (496)
T PRK03893 245 LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGA 324 (496)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 0000111111111111111235578999998778999999999999999999
Q ss_pred HHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh-ccChhHHHH-HHHHHHHHHHhhhhhchhHhhhhhc
Q 012519 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-AAKSPVMAS-AWLTLAIGMKSFSHSGFLVNLQEIA 451 (461)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (461)
+++.++.|++.||+++| + .+ ..+.+..++..+... ......... ...++..+......+....+..+..
T Consensus 325 ~~g~~~~g~l~dr~g~~-------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (496)
T PRK03893 325 AVGCCVGGFLGDWLGTR-------K-AY-VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF 395 (496)
T ss_pred HHHHHHHHHHHHHhcch-------H-HH-HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC
Confidence 99999999999999987 2 22 222222222222222 122222111 1112111222222344556677777
Q ss_pred c-cccccccCC
Q 012519 452 P-QYSGVLHGI 461 (461)
Q Consensus 452 p-~~~g~~~gl 461 (461)
| +++|+++|+
T Consensus 396 ~~~~~g~~~~~ 406 (496)
T PRK03893 396 DTEQRAAGLGF 406 (496)
T ss_pred CHHHhhcccch
Confidence 7 468888764
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.98 E-value=3.6e-30 Score=253.32 Aligned_cols=349 Identities=17% Similarity=0.182 Sum_probs=234.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhc--------CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAH--------GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 166 (461)
+...+.+++..++.+..+++...+++..|.+++++ +.+..+.+++.+++.++.+++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34566777778889999999999999999888877 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc----------cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHH
Q 012519 167 MAWGVALWSLATFLTPWAA----------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS 236 (461)
Q Consensus 167 ~~~~~~~~~i~~~~~~~~~----------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 236 (461)
++++.++.+++.++++++. .++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 9999999999888776530 123567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CcchhHHHHHHHhhcCccccCCC
Q 012519 237 GNAIGLVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLLMGNK 307 (461)
Q Consensus 237 G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (461)
|..+++.+++.+. +..|||+.|++.+++.++..+. .++.||+|+... +.+.++.+...++....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~------ 240 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGN------ 240 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCC------
Confidence 9999988776654 3568999999988877776544 455677764321 11122221111111100
Q ss_pred CCCCCCChhHHHHhc-----chhhH-----H----HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHH
Q 012519 308 HKPATVIPPFRRLLS-----KMPTW-----S----IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~-----~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (461)
.+.+....+.++.++ .+.++ . .....+......+...++.|.+.++ .|++.....+.....++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~ 319 (479)
T PRK10077 241 TLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVIN 319 (479)
T ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHH
Confidence 000000001111111 00100 0 0111111122233445667777766 5888777777777888889
Q ss_pred HHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh--c-cChh-HHHHHHHHHHHHHHhh-hhhchhHhhh
Q 012519 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT--A-AKSP-VMASAWLTLAIGMKSF-SHSGFLVNLQ 448 (461)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~ 448 (461)
+++.+++++++||++|| .++..+.++.+++.+.+. . .+.. ......+++..+..+. ..+..+.+..
T Consensus 320 ~i~~~~~g~l~dr~g~r---------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (479)
T PRK10077 320 LTFTVLAIMTVDKFGRK---------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 390 (479)
T ss_pred HHHHHHHHHHHHHhcCh---------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhH
Confidence 99999999999999988 233344444444333322 1 1111 1222222222222222 2356678888
Q ss_pred hhcc-cccccccC
Q 012519 449 EIAP-QYSGVLHG 460 (461)
Q Consensus 449 ~~~p-~~~g~~~g 460 (461)
|..| ++||++.|
T Consensus 391 e~~p~~~r~~~~g 403 (479)
T PRK10077 391 EIFPNAIRGKALA 403 (479)
T ss_pred hhCChhHHHHHHH
Confidence 9987 46888765
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.98 E-value=1e-29 Score=244.12 Aligned_cols=319 Identities=21% Similarity=0.174 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
+.+..+.+..++..++..+..+.+|. +.+++|.++.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 44555677777777777788888886 67889999999999999999999999999999999999999999999988887
Q ss_pred HHHhhccc------cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012519 178 TFLTPWAA------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 178 ~~~~~~~~------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 251 (461)
.++++++. ..+++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+|+.+++.+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 66654431 025678999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHH
Q 012519 252 AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIV 331 (461)
Q Consensus 252 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (461)
+||++.+++.+++.++..+.. ...|+.+++. + + ..++++.++ +++....
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~-------------------~----~~~~~~~~~--~~~~~~~ 223 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLA-RPRPAVPPVK-----G-------------------E----RLPFRRVLG--RVWPYGM 223 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-hcCCCCCCCC-----c-------------------c----chhHHHHHH--HHHHHHH
Confidence 999999887666554433222 1112111100 0 0 012223332 2222233
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH
Q 012519 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (461)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (461)
...+..+.+.....+++.|+.+. |+ ...+.......++.+++.++.|++.||+++| + ....+..+.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-------~--~~~~~~~~~~~ 291 (399)
T PRK05122 224 GLALASIGFGTIATFITLYYAAR-GW--DGAALALTLFGVAFVGARLLFGNLINRLGGL-------R--VAIVSLLVEIL 291 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-cc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccH-------H--HHHHHHHHHHH
Confidence 33344455666777888888763 65 3456667778888899999999999999877 2 22333344444
Q ss_pred HHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+.......++.+..+...++.+.+.+...+.......+..| +++|++.|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g 341 (399)
T PRK05122 292 GLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALG 341 (399)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 44444444444444333344444444444444455555555 56887765
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=2e-29 Score=240.50 Aligned_cols=325 Identities=15% Similarity=0.118 Sum_probs=234.5
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
.++++.++..+.........+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34566666666555556666677889999999999999999999999999999999999999999999999999988877
Q ss_pred ccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 012519 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (461)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 262 (461)
++ .+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++.+.+.. |+..+.+.+
T Consensus 87 ~~--~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~ 160 (393)
T PRK11195 87 FG--IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCA 160 (393)
T ss_pred HH--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 77 554 778999999999999999999999999999999999999999999999999999998864 777777766
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHH
Q 012519 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (461)
...++.. +..+..||++++.+..+.+..... ++ ....++.++++|.+.......++.......
T Consensus 161 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (393)
T PRK11195 161 LIYLLAA-LFNLFIPRLGARRPGQSWNPIALL-RD---------------FFHACRVLWRDKLGRFSLAGTTLFWGAGAT 223 (393)
T ss_pred HHHHHHH-HHHhcCCCCcccccccCCCHHHHH-HH---------------HHHHHHHHHhCchhHHHHHHHHHHHHHHHH
Confidence 5544433 334455655433221111110000 00 012345678888877665555555555666
Q ss_pred HHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChh
Q 012519 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (461)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (461)
....+|.|+++.+|.++.+.|++.....++.+++.++.+++.||.+++ + .+..+. ..+...+.+...++.
T Consensus 224 ~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-------~--~~~~g~-~~~~~~~~~~~~~~~ 293 (393)
T PRK11195 224 LRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-------R--VLPAGI-LMGLVVLLMALQHSL 293 (393)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-------c--hHHHHH-HHHHHHHHHHHHhHH
Confidence 677788888888999999999999999999999999999999887665 1 222232 223333333333344
Q ss_pred HHHHHHHHHHHHHHhhhhhchhHhhhhhcccc--cccccC
Q 012519 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAPQY--SGVLHG 460 (461)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~g~~~g 460 (461)
+......++.+.+.+...+...+..++..|++ +|++.|
T Consensus 294 ~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a 333 (393)
T PRK11195 294 LPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIA 333 (393)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHH
Confidence 43333444444555555566667777777764 466543
No 55
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=2e-30 Score=255.30 Aligned_cols=294 Identities=17% Similarity=0.115 Sum_probs=210.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCC--------chhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHH
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 166 (461)
++.+....++.++.++..++...+....+.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33445555666677778888888999999998888777 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 012519 167 MAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (461)
Q Consensus 167 ~~~~~~~~~i~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 245 (461)
++++.++..++.+++.+.. ..+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999885541 145678999999999999999999999999999999999999999999999999999998
Q ss_pred ---HHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CcchhHHHHHHHhhcCcccc----------------C
Q 012519 246 ---PILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLLM----------------G 305 (461)
Q Consensus 246 ---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------------~ 305 (461)
..+.+..+||+.|++.++..++.. +..++.||+|+... +.+.++.++..++....... .
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 665567899999999666555544 34445566653211 01111111111000000000 0
Q ss_pred CCCCCCCCChhHHHHhc---chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHH
Q 012519 306 NKHKPATVIPPFRRLLS---KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGL 382 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~ 382 (461)
+.+..+.....+.+.++ .+.++...+..+...........+.|.++++ .|++..+.+....+..++.+++.++.|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 341 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIF 341 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011112222222 2223333333333333344556677777766 5999888888888999999999999999
Q ss_pred hhhhHhhc
Q 012519 383 LSDMLIQR 390 (461)
Q Consensus 383 l~dr~~~~ 390 (461)
+.||+++|
T Consensus 342 l~d~~~~~ 349 (481)
T TIGR00879 342 LVDRFGRR 349 (481)
T ss_pred HHHHhcch
Confidence 99999988
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=6e-29 Score=237.67 Aligned_cols=322 Identities=17% Similarity=0.140 Sum_probs=242.0
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
+.++++..++.++.....++..|.+++++|.+..+.|++.+.+.+++.+++++.|++.||+|||++++++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45667777777888888899999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhcc-ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------
Q 012519 181 TPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------- 251 (461)
Q Consensus 181 ~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------- 251 (461)
+..+ ..++++.+++.|++.|+|.|...+..+.++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 5443 1268999999999999999999999999999999999999999999999999999999999887532
Q ss_pred ------------------cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCC
Q 012519 252 ------------------AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (461)
Q Consensus 252 ------------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (461)
.+||++|++.+++.++..++..+. +. |+..+. + + ++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~-~-~-------------------~~~~~ 221 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHS-D-A-------------------KQISF 221 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCcc-c-c-------------------ccccc
Confidence 369999999888777655444322 21 111100 0 0 00011
Q ss_pred ChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhh-CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCc
Q 012519 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (461)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (461)
..+.++++|+|.++...+..+++.........+++.|.++.. +.+...++...+....+..+|+++++++.||+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-- 299 (410)
T TIGR00885 222 SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-- 299 (410)
T ss_pred hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--
Confidence 124457889999999888888888888888899999997632 33333445566666678899999999999999887
Q ss_pred chhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccccc
Q 012519 393 SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYS 455 (461)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 455 (461)
+. +.+..+...+..++....++... ...+.+.+++.+..++..++...+..+++.
T Consensus 300 ------~~-l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~ 354 (410)
T TIGR00885 300 ------KV-LMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDT 354 (410)
T ss_pred ------HH-HHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 23 33333333333343444444333 333444445555555777777777776653
No 57
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=1e-29 Score=245.33 Aligned_cols=323 Identities=17% Similarity=0.130 Sum_probs=238.9
Q ss_pred HHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc---
Q 012519 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--- 183 (461)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--- 183 (461)
..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34555556667788889999999999999999999999999999999999999999999999888887777665432
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 263 (461)
...++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 11278899999999999999988899999999999999999999999999999999999999999998999999998877
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
..++..++.+ ..|+.++++++.+ +..+.....++.++++|.++...+..++... ....
T Consensus 185 ~~~~~~~~~~-~l~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (417)
T PRK10489 185 GTFITLLPLL-RLPALPPPPQPRE--------------------HPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAV 242 (417)
T ss_pred HHHHHHHHHH-hCCCCCCCCcccc--------------------cchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhH
Confidence 7666555444 3444332211000 0000112245567788887766555544333 4567
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhH
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (461)
..++|.|+++.+|.++...+++.+...++.+++.++.+++.||.+++ ..+..+.++.++.++.+...++..
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 313 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGLMPMWI 313 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHccchHH
Confidence 78899999997899999999999999999999999999999885444 223334444444444444444444
Q ss_pred HHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
......++.+.+.+...+....+.++..|+ +||+++|
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 351 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRING 351 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 333444444444455555666778888875 5888765
No 58
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=2.7e-28 Score=233.18 Aligned_cols=312 Identities=14% Similarity=0.072 Sum_probs=229.1
Q ss_pred HHHHhhhHhh-hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHH
Q 012519 112 NADRVVMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (461)
Q Consensus 112 ~~~~~~~~~~-~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 190 (461)
........+. .+.+.+++|.+..++|++.+.+.++..+.+++.|+++||+|||++++++.++.+++.+++.+. ++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~~ 100 (400)
T PRK11646 23 VLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--HEPW 100 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--ccHH
Confidence 3333344444 445678999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 191 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||++++.+. .+|||+.|++.++..++..+
T Consensus 101 ~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i 179 (400)
T PRK11646 101 LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAA 179 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999888999999999999999999999999999999999999999998 67999999998887776655
Q ss_pred HHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHH
Q 012519 271 VWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIY 350 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (461)
+..+..|+.++++. +++...++++.+++|+++...+..+...........++|.|
T Consensus 180 ~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 234 (400)
T PRK11646 180 FNAWLLPAYKLSTV-------------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIM 234 (400)
T ss_pred HHHHhCCccccccc-------------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 55555444211100 00112356678889988876666555554445556788999
Q ss_pred HHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhh-HhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHH
Q 012519 351 FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL 429 (461)
Q Consensus 351 ~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (461)
+++. +.++.+.+++.+...++...+....+++.|| ++.+ + .+..+.+..+++.+.+...++.+......
T Consensus 235 ~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 304 (400)
T PRK11646 235 VNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-------H--RLMAGLLIMSLSMFPIGMVSNLQQLFTLI 304 (400)
T ss_pred HHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-------H--HHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9886 4467778888777776666555555555554 4333 1 22334444444444444444444333333
Q ss_pred HHHHHHHhhhhhchhHhhhhhcc-cccccccCC
Q 012519 430 TLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI 461 (461)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl 461 (461)
++...+.+...+.......+..| +++|++.|+
T Consensus 305 ~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~ 337 (400)
T PRK11646 305 CLFYIGSIIAEPARETLSASLADARARGSYMGF 337 (400)
T ss_pred HHHHHHHHHHHccHHHHHHhcCCcccchhhhhH
Confidence 34444445555666777778776 578988763
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=3.9e-28 Score=231.32 Aligned_cols=258 Identities=16% Similarity=0.130 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
+..+.++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHH
Q 012519 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (461)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 260 (461)
++++ ++++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+...|...+ .
T Consensus 88 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~ 164 (381)
T PRK03633 88 LGLM--VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-V 164 (381)
T ss_pred HHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-H
Confidence 9999 999999999999999999988988888889999999999999999999999999999999987754343333 3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHH
Q 012519 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (461)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (461)
.+........+ ++. +.++++.+ + + ...+.++.+++|.++......+.....+
T Consensus 165 ~~~~~~~~~~~-~~~-~~~~~~~~---------------------~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
T PRK03633 165 TGLVLAAILPL-LFT-RILNQQAE---------------------N--H---DSTSIWPMLKLRQARLGVNGCIISGIVL 216 (381)
T ss_pred HHHHHHHHHHH-HHh-cccCCCCC---------------------C--C---CCCCHHHHHHhcchHHHHHHHHHHHHHH
Confidence 22222221111 221 11111100 0 0 0123456788888776655555555556
Q ss_pred HHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.....++|.|+++ .|.++...+.+.+...++.+++++..|++.||+++|
T Consensus 217 ~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 217 GSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH
Confidence 6677889999987 599988899988899899999999999999999987
No 60
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=6.6e-30 Score=255.14 Aligned_cols=289 Identities=17% Similarity=0.181 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 181 (461)
+...+..+.........+..++.+.++|+++..+.|++.+.+.++++++.++.|+++||+|||+++.+++++++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44455677777777888999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccc-------------------------------------------------cccHHHHHHHHHHHhhhhhchhhHHHH
Q 012519 182 PWAA-------------------------------------------------DTSLLALLAMRAVVGLAEGVALPAMNN 212 (461)
Q Consensus 182 ~~~~-------------------------------------------------~~~~~~l~~~r~l~G~~~g~~~~~~~~ 212 (461)
++.+ ...+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7752 002567889999999999999999999
Q ss_pred HHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------------------CchhHHHHHHHHHHHHHH
Q 012519 213 MVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------------------GIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 213 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~ 270 (461)
++.|++|+++|+++++++..+..+|..+|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988643 277778888888877766
Q ss_pred HHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCC-CCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q 012519 271 VWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN-KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
.++++.++.|+...+.+.+..+.......+...... ....+.....++++++||.++...+..++.....+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655554444432211111100000000000000000 0001112345778999999999999999999999999999999
Q ss_pred HHHHhhCCCccccchhhhhhHH-HHHHHHHHHHHhhhhHhhc
Q 012519 350 YFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~ 390 (461)
|+++.+|+++.+++++..+..+ +.+++.+++|+++||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 5688999999999999865
No 61
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.8e-28 Score=234.80 Aligned_cols=317 Identities=17% Similarity=0.144 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
+..+.++.++.........+.+|. +.+++|.|..++|++.+++.++..++++++|+++||+||||+++.+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444555566666677777775 6789999999999999999999999999999999999999999999888776654
Q ss_pred Hh---hccc---cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 180 LT---PWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 180 ~~---~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
.. +... .++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||++++.+.++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 2210 15789999999999999998899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHH
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (461)
||+.+.+..+..++.... ....|+.+++.+ ++ .+.++.++ .++...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------------~~----~~~~~~~~--~~~~~~~~~ 225 (392)
T PRK12382 177 FAALALTTMVLPLLAWAF-NGTVRKVPAHAG------------------------ER----PSLWSVVG--LIWKPGLGL 225 (392)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhccCCCCCcc------------------------cC----chHHHHHH--HHHHhHHHH
Confidence 998877655443332221 111122111000 00 01112221 122222223
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHH
Q 012519 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (461)
++..........+.|.|+++. +++ ..+.......++.++++++.|++.||+++|+ .. ..+....++..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~--~~~~~~~~~~~ 293 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFASK-GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-------VA--IVSLLVETVGL 293 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhc-CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-------eh--HHHHHHHHHHH
Confidence 333445556677888888774 665 3556666677778899999999999999873 12 22333333333
Q ss_pred HHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+.....++.+..+...++.+...+...+.......+..| +++|++.|
T Consensus 294 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 341 (392)
T PRK12382 294 LLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALG 341 (392)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHH
Confidence 333334444433333344444444445555555566555 67888765
No 62
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=3.2e-29 Score=248.06 Aligned_cols=322 Identities=16% Similarity=0.102 Sum_probs=228.5
Q ss_pred hhhhhhhhhcCCC---chhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 120 VAIVPLSLAHGWS---RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 120 ~~~~~i~~~~~~s---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
+..+.+.+|++++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++ ++++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence 5678899999999 8999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhc
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877653 9999999998887766655 566
Q ss_pred CCCCCCCC-CcchhHHHHHHHh----hcCccc-----c--CCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHH
Q 012519 277 SSTPDRHP-QISKYELEYILRE----KQKPLL-----M--GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (461)
Q Consensus 277 ~~~~~~~~-~~~~~~~~~~~~~----~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (461)
||+|+... +.+.++..+..++ ...... . ++....+.....+++++++|.++...+...+..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 88775321 1111221111111 100000 0 0000011112467789999988777666555444433333
Q ss_pred HhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChh--
Q 012519 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP-- 422 (461)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 422 (461)
..++.+..+ .+.+. .......++..+++.++.+++.||+||| ..+..+.++.+++.+.....++.
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 333333333 34432 2334455677788999999999999988 23334444444444444333322
Q ss_pred HHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
+......++..++.+..++..+.+..|..|. .|+++.|
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g 449 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVG 449 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHh
Confidence 3333444445555555667778888999985 5887766
No 63
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=9e-28 Score=231.47 Aligned_cols=323 Identities=18% Similarity=0.127 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchh-----HHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSF-----SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
.++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..++.++.|+++||+|||++++.+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 445556666777778888999999999988654 488999999999999999999999999999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhH
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~ 257 (461)
.+++++. ++++.+++.|++.|++.+ ..+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.
T Consensus 98 ~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 174 (408)
T PRK09874 98 MVLMGLA--QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPV 174 (408)
T ss_pred HHHHHHH--hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 9988888 999999999999999865 5677888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHH-HHHHHH
Q 012519 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII-VANAMH 336 (461)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 336 (461)
|++.+++.++..+..++..+|+++..++.+.. ...+..+.+++++++... ...++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
T PRK09874 175 FFITASVLFLCFLVTLFCIRENFQPVSKKEML-----------------------HMREVVTSLKNPKLVLSLFVTTLII 231 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccccchhhh-----------------------HHHHHHHhCcCCchHHHHHHHHHHH
Confidence 99999888777766666666543221110000 001223456677665433 333444
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCcc---ccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (461)
.........+++.|..+..+.... ..+.+..+.+++.+++.+..|++.||+++|+ .+..+....++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~ 302 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK---------ILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch---------hHHHHHHHHHHHH
Confidence 444555667788888875332221 2345556667778888999999999999882 2223333333333
Q ss_pred HHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+.....++.+...+..++.+.+.+...+.......+..| +++|++.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 303 IPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFS 350 (408)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeeh
Confidence 333333444444444444455555555666666666665 56787765
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=2.3e-28 Score=230.57 Aligned_cols=301 Identities=30% Similarity=0.457 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
.+.+..+....+.....+..|.+.++++.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 44566777778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 012519 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (461)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 262 (461)
+. ++++.++++|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+..+||+.|++.+
T Consensus 83 ~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FA--SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hh--ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHH
Q 012519 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (461)
++.++..+...+.. |.++...+..++.......
T Consensus 161 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~ 193 (352)
T cd06174 161 ILGLLLALLLLFLL-----------------------------------------------RLLLLLALAFFLLSFGYYG 193 (352)
T ss_pred HHHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHHHHHHhHHHH
Confidence 88777666555431 5577788888888888999
Q ss_pred HHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChh
Q 012519 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (461)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (461)
...+.|.+.++.+|.+..+.+.......++..++.++.+++.||+++| ++ .+..+.....++.+.....++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~i~~~~~~~~~~~ 265 (352)
T cd06174 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-------RL-LLLIGLLLAALGLLLLALAPSL 265 (352)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hH-HHHHHHHHHHHHHHHHHHhccH
Confidence 999999999997799999999999999999999999999999999988 21 3444555555555555555555
Q ss_pred HHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+......++...+.+...+.......+..| +++|+.+|
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASG 304 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHH
Confidence 555556666667777777888888888888 56887665
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.2e-28 Score=232.77 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=201.8
Q ss_pred hhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Q 012519 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (461)
Q Consensus 116 ~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (461)
..+++.+|.+.+++|.+.++.+++.+++.++..++.++.|+++||+|||+++.++.++..++.+.+ .. ++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~--~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA--PGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh--ccHHHHHHH
Confidence 466789999999999999999999999999999999999999999999999999999988888877 67 899999999
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~ 273 (461)
|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+++.+.++. +||+.|.+.+++.++..+..
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~- 171 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW- 171 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-
Confidence 999999999888888889999996 68999999999999999999999999888765 39999988776544433222
Q ss_pred HhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 012519 274 SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
.++.+++.++ + ++......++++|+|.++...+..++....++....|+|.|+++
T Consensus 172 --~~~~~~~~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 172 --IPQVRRRVAA--------------------N---QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred --hhhhccccCC--------------------C---CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211100 0 00001123467888988887777777778888888999999987
Q ss_pred hhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 354 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.|++..+.+.+.+...++.++++++.|++.||+++|
T Consensus 227 -~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 227 -HGASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 599999999999999999999999999999999655
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=5.5e-28 Score=230.14 Aligned_cols=318 Identities=13% Similarity=0.039 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHH----HHHHHHHHHHHH
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM----AWGVALWSLATF 179 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~~i~~~ 179 (461)
+.+.++..+.......|.+|.+.+++|.+..++|++.+++.+...++++++|+++||+||++.. .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4566666667777888999999999999999999999999999999999999999999985433 233222222 2
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
.+..+ ++++.+++.|+++|.+.+...|...++..++ +++|+++.|......++|.+++|++++.+.+++|||..|+
T Consensus 87 ~~~~~--~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGA--HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhh--hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 34466 8999999999999999888889988887765 4789999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHH
Q 012519 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (461)
+.+...++ .+..+...|+.+++.+. + +++.....++++++|+|+++...+..++....
T Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~ 220 (382)
T TIGR00902 163 ILTAGLAF-MLIGFLIKPTIPPKDAI-P--------------------EDESQGDSAFIALLKNPMNLRFLAAVCLIQGA 220 (382)
T ss_pred HHHHHHHH-HHHHHHcCCCCCCCccc-c--------------------ccccccchhHHHHHcChHHHHHHHHHHHHHHH
Confidence 87655333 22233333322221110 0 00001123567899999999999999998899
Q ss_pred HHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc
Q 012519 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (461)
......+.|.|+++ .|.++.+.|.+..+..++.+++.++.+++.||++.| .++.++.+..++........
T Consensus 221 ~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 221 HAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH
Confidence 99999999999988 699999999999988888899999999999999887 34456666777666666666
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccccccccc
Q 012519 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLH 459 (461)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~ 459 (461)
++.+..+...++-+...+...+....++++..++++++..
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q 330 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQ 330 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHH
Confidence 6666666666666677777777777788877334565543
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=6.7e-28 Score=231.17 Aligned_cols=320 Identities=17% Similarity=0.113 Sum_probs=232.4
Q ss_pred HHHHHHHhhhHhhhhhhhhhcC--CCchhHHHHHHH-----HHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh
Q 012519 109 ALCNADRVVMSVAIVPLSLAHG--WSRSFSGIVQSS-----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 109 ~~~~~~~~~~~~~~~~i~~~~~--~s~~~~~~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 181 (461)
+.++++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||++++++.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888877754 455666665543 333445688999999999999999999999999999999
Q ss_pred hccccccHH--------HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 012519 182 PWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM---- 249 (461)
Q Consensus 182 ~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~---- 249 (461)
+++ ++++ .++++|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+.
T Consensus 83 ~~~--~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLL--PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhC--CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999 7765 48889999999999999999999999999999999999999999999999999887664
Q ss_pred ----hhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchh
Q 012519 250 ----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP 325 (461)
Q Consensus 250 ----~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (461)
+..+||+.|++.+++.++..++ ....+|+++..++ . .+++....+.++.+++++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~----------------~~~~~~~~~~~~~~~~~~ 218 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKA-----Q----------------EKHKKKRGPIRETLTKHR 218 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHH-----H----------------hccccccCCHHHHHHhch
Confidence 3568999999877666554333 2233443321100 0 000111234556676665
Q ss_pred --hHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHH
Q 012519 326 --TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (461)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (461)
++...+..++.....+....++|.|+++.+|.+..+.+.......++..++.++.|++.||+++| + .+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-------~-~~~~ 290 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-------P-VLII 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-------H-HHHH
Confidence 77777777777788888889999999887899999999999999999999999999999999988 2 2222
Q ss_pred HhhHHHHHH--HHH-HhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 404 IGFIAPGIA--LIG-LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 404 ~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
.+.+..... .+. ....++.+......++.....+...+.......|..|+ +|+++.|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 351 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGAS 351 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEee
Confidence 222222211 111 11223333333444445555566667778888898885 5887765
No 68
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1.2e-27 Score=226.18 Aligned_cols=313 Identities=13% Similarity=0.092 Sum_probs=231.2
Q ss_pred hhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-----cchHH-HHHHHHHHHHHHHHhhccc-ccc
Q 012519 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWSLATFLTPWAA-DTS 188 (461)
Q Consensus 116 ~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~~~~~~~~~-~~~ 188 (461)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.. ..+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999766 555555 99999999998 89986 5667777777766666652 135
Q ss_pred HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------chhHHHH
Q 012519 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--------IFGPFVI 260 (461)
Q Consensus 189 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--------wr~~f~~ 260 (461)
++.+....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.++.+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66777788888999898999999999999999999999999999999999999999999998888 9999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchh---hHHHHHHHHHHH
Q 012519 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP---TWSIIVANAMHS 337 (461)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 337 (461)
.++..++..+..++..||+.++.+. ++++. ++...++++++++|. ++...+..++..
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLT-------------------QAVLKPIREFFQRKNMIQALLLLLLIVLYK 222 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHH-------------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9988777665555555654322111 00000 001134567777775 777777777778
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccchhhhhhH-HHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
..++....+.|.|+++ +|+++.+.+.+....+ +..+++.+++|++.||+++| +... .+.++.++.....
T Consensus 223 ~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~~l~--~~~~~~~~~~~~~ 292 (356)
T TIGR00901 223 LGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-------YALL--LFGIVQALTNAGF 292 (356)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-------HHHH--HHHHHHHHHHHHH
Confidence 8888889999999998 7999999888877666 56788999999999999987 2222 2223333322222
Q ss_pred hcc-----------ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 417 TAA-----------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 417 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
... ++.+......++..+..+...+...++..+..| +++|+..|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g 348 (356)
T TIGR00901 293 VWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMA 348 (356)
T ss_pred HHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 111 223333444445566677788888899998887 56888765
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=1.4e-27 Score=228.24 Aligned_cols=315 Identities=15% Similarity=0.093 Sum_probs=212.4
Q ss_pred HHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhcchHHH-HHHHHHHHHHHHHhhc
Q 012519 107 ALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIM-AWGVALWSLATFLTPW 183 (461)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~~ 183 (461)
..++.........+.++. +.+++|.+.+++|++.+...+ +..++.++.++ .||+||||.+ +.+.++.+++.++.++
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~ 101 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 344555555555565555 678999999999999876655 55555655555 9999999875 5566666677778888
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
+ ++++.+++.+.+.|...+...+...+++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.
T Consensus 102 ~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~ 179 (393)
T PRK15011 102 N--RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSA 179 (393)
T ss_pred h--hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHH
Confidence 8 8999887665555544556788888999998876555 34568889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcc-hhhHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGF 340 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 340 (461)
++..++..+..++..||.+++++... + .. .. ..++ +..+......++.....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~-------~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK15011 180 AVAFIVCGVMVWLFLPSMRKELPLAT-G----------------TL-------EA---PRRNRRDTLLLFVICTLMWGTN 232 (393)
T ss_pred HHHHHHHHHHHHhhcCccCCCCcccc-c----------------cc-------cc---cccccccHHHHHHHHHHHHHHH
Confidence 98888777776766676653322100 0 00 00 0011 22233333344444555
Q ss_pred HHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccC
Q 012519 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (461)
..+..+.|.|+++.+|+++.+.+.+.....++.+++.++.|+++||+++| + .+ ..+.....+........+
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~-~~-~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-------F-LM-RVAAVAGVCFYAGMLMAH 303 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HH-HHHHHHHHHHHHHHHHHh
Confidence 56677899999888899998888888877788888999999999999988 2 22 222222222222222233
Q ss_pred hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccC
Q 012519 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (461)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g 460 (461)
+.+..+...++.....+...+....+.+|..|+++|+++|
T Consensus 304 ~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~ 343 (393)
T PRK15011 304 SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATT 343 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHH
Confidence 3333333334444444554555566778888988887654
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=3e-27 Score=225.23 Aligned_cols=314 Identities=12% Similarity=0.022 Sum_probs=231.8
Q ss_pred HHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcch----HHHHHHHHHHHHHHHHhhc
Q 012519 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK----IIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 108 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~~~~ 183 (461)
++........+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 444445556888889999999999999999999999999999999999999999984 3333332222 2233344
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 263 (461)
. +++|.+++.|++.|++.+...+...+++.++ +++|+++.+......++|..+||++++++.+++|||..|++.++
T Consensus 91 ~--~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 A--HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred c--ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 5 8899999999999999998999888888877 46788999999999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
..++..+. .+..||++++.++ +++.++...++++++|+|+++...+..++........
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 224 (382)
T PRK11128 167 GVASMLLG-QLLRPTIMPQGES---------------------RQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAY 224 (382)
T ss_pred HHHHHHHH-HHccCCCCCcccc---------------------ccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhH
Confidence 55544333 3333332111100 0000111246789999999999888888887777788
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhH
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (461)
..+.|.|+++ .|++..+.|.+.+...++.++..++.+++.||++++ ..+..+.+..++..+.....++.+
T Consensus 225 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 225 YGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHH
Confidence 8889999977 699998899998888888899999999999999887 233445555555555555556655
Q ss_pred HHHHHHHHHHHHHhhhhhchhHhhhhhccccccccc
Q 012519 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLH 459 (461)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~ 459 (461)
..+...++.+...+...+....+..+..+++++++.
T Consensus 295 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (382)
T PRK11128 295 WLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQ 330 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHH
Confidence 555555555555666666666666666555555543
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-27 Score=230.72 Aligned_cols=347 Identities=20% Similarity=0.162 Sum_probs=280.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
..+.|.+++..++...........++...+.++++++.+.++++|+.++......+..++.+.+.||||.|.+.++|.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 45668888888888888877788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHH-HHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 174 WSLATFLTPWAADTSLLALLAM-RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
.+++.++.+++ +++|++++. -++.|+|.|+.+.....++..|| +++|+.+.|+..++.++|.++-|.+..++.+.+
T Consensus 121 ~~~g~~lssF~--~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 121 AALGLLLSSFA--TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 99999999999 999998775 68999999999999999999998 589999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHH------------Hh--hcCccc----------cCCCC
Q 012519 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL------------RE--KQKPLL----------MGNKH 308 (461)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--~~~~~~----------~~~~~ 308 (461)
|||+.+++.+.+.+..++......|..++..+. .+++.+... .. ...... .+..+
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 999999999999988777777777744443222 000000000 00 000000 00000
Q ss_pred CCC--CCChhH----HHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHH
Q 012519 309 KPA--TVIPPF----RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGL 382 (461)
Q Consensus 309 ~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~ 382 (461)
+.. ...... .+++++|.++.+.+...+...+++....++|.|..+ .|++..+++.++++.++..++++++.|+
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~ 355 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhh
Confidence 000 111111 488999999999999999999999999999999996 6999999999999999999999999999
Q ss_pred hhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 383 LSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 383 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
+.|+...+ ++.+..++++..++..+.....++.+..+.+.++.+...+.........+.++.+
T Consensus 356 laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g 418 (509)
T KOG2504|consen 356 LADKPGIR-------ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVG 418 (509)
T ss_pred hcCccccc-------hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99998865 4577778888888888777777777777777777777777776666666666664
No 72
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=2.6e-27 Score=226.01 Aligned_cols=319 Identities=14% Similarity=0.088 Sum_probs=231.0
Q ss_pred HHHHHHHHHHhhhHhhhh-hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc
Q 012519 106 LALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 184 (461)
...++.........+.++ .+.+++|.+..++|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 344444555555555554 5667899999999999999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 012519 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 185 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
++++.++++|++.|.+.+...+...++..|.+|+++|++++++.....++|..+||++++.+.+ .+|+..|++.+++
T Consensus 94 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 94 --NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAIC 170 (395)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHH
Confidence 9999999999999988888888899999999999999999999999999999999999998875 7999999998888
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHH
Q 012519 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (461)
.++..++..+..|+.++++++ +++ ...+.++.+|+|+++...+..++..+......
T Consensus 171 ~~i~~i~~~~~~~~~~~~~~~--~~~----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 226 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKAIAT--ETG----------------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFA 226 (395)
T ss_pred HHHHHHHHHHHHhcccccccc--chh----------------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhh
Confidence 777655555544443221110 000 00122577889999888888887777776666
Q ss_pred HhHHHHHHHhh--CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc-Ch
Q 012519 345 SWMPIYFNFVY--HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA-KS 421 (461)
Q Consensus 345 ~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 421 (461)
.+.+.|+.... +.+....+.+.....+..+......|++.||.++| ..+..++...++....+... ++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~ 297 (395)
T PRK10054 227 SCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNS 297 (395)
T ss_pred hhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchH
Confidence 77777775532 44445566666666666666677888899988777 23333444444444333332 33
Q ss_pred hHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
.+...+...+...+.+...+.....+.+..|+ .+|+..|
T Consensus 298 ~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~ 337 (395)
T PRK10054 298 LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFS 337 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHh
Confidence 33333333444444445455666777777774 5776543
No 73
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=2.1e-26 Score=225.26 Aligned_cols=327 Identities=16% Similarity=0.148 Sum_probs=231.5
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-----cchHH-HHHHHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWS 175 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~ 175 (461)
..+.+.++..+.........+|...++.|.+..+++.+ +.....+ ++.+++|+++||+ ||||. ++++.++.+
T Consensus 15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 34455555666666688888999999999999999997 4444444 5899999999999 99985 667777777
Q ss_pred HHHHHhhccc-cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC
Q 012519 176 LATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAG 253 (461)
Q Consensus 176 i~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~g 253 (461)
++..+.++.. .++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ..|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 7777766652 25788999999999999999999999999999999999999999999999999999999999998 579
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHH
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (461)
||..|++.+++.++..+..++ .||+++..+. + ++ .++....+++++++++..|...+..
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~-~~------------------~~~~~~~~l~~~~~~~~~~~~ll~~ 231 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATLL-APEPTDTIPV-P-KT------------------LEQAVVAPLRDFFGRNNAWLILLLI 231 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCCcccccc-c-cc------------------hhhhHHHHHHHHHcCcCHHHHHHHH
Confidence 999999999887776555444 4654322110 0 00 0001123567788888887777666
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhCCCccccchhhh-hhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhH--HHH
Q 012519 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA-VPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI--APG 410 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~~~ 410 (461)
++..........+.+.|+.+..|++..+.+.... ...++.+++.+++|+++||+++| + .+...+.+ ...
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-------~-~l~i~~~l~~l~~ 303 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-------R-ALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-------H-HHHHHHHHHHHHH
Confidence 7766676677778888887778999999999874 55578899999999999999987 2 22222211 111
Q ss_pred HHHHHHhcc-ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-cccccc
Q 012519 411 IALIGLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLH 459 (461)
Q Consensus 411 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~ 459 (461)
+........ ++........++.....++..+...+...+..++ ..++..
T Consensus 304 l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~ 354 (491)
T PRK11010 304 AGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQF 354 (491)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 111112222 2322222233333334455555566777777764 355443
No 74
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=4.2e-26 Score=211.31 Aligned_cols=337 Identities=11% Similarity=0.053 Sum_probs=242.8
Q ss_pred HHhhhHhhhhhhhhhcCCCchh-HHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHH
Q 012519 114 DRVVMSVAIVPLSLAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (461)
Q Consensus 114 ~~~~~~~~~~~i~~~~~~s~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l 192 (461)
.+...+.+.|.+.+++|+|..| .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++.+++ ++++.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 4667888899999999999999 9999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH--HHHHHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF--GLSGFLWVL 270 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~--~~~~~~~~~ 270 (461)
.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++. ...+|||+-+.+. ...+....+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999999 5578999866543 223333344
Q ss_pred HHHHhcCCCCCCCCCcchhHHH-HHHHh--hcCcccc-CCCC-CC-------CCCChhHHHHhcchhhHHHHHHHHHHHH
Q 012519 271 VWLSATSSTPDRHPQISKYELE-YILRE--KQKPLLM-GNKH-KP-------ATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~-~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (461)
++-+++|..++..-..++++.+ ....+ ....... ...+ .+ ...+..++...+||.++.-.+-+.+...
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 4445556433321100000000 00000 0000000 0000 00 1123355667888988888888888888
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhc
Q 012519 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (461)
+++.+.+|......+..+-+....|.+-++..+.+.+..+..|++-.++.+. ....+.+..++.+..++++..
T Consensus 277 g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 277 GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhc
Confidence 8888888887777665332223567777777788888889999885554332 234455555566666777778
Q ss_pred cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhc-ccccccccCC
Q 012519 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGI 461 (461)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gl 461 (461)
.++.+...+..+++...+.+..+....-+.... .+.-|.+.|+
T Consensus 350 t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGi 393 (511)
T TIGR00806 350 SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGI 393 (511)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEec
Confidence 888888887777777777777665554444333 3445666653
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.3e-26 Score=202.19 Aligned_cols=327 Identities=17% Similarity=0.131 Sum_probs=261.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 178 (461)
..+..++...++.++......+.+|.+++.|+++..|++++...+..++.+.+++.|++.+|+|+|+.++.|+.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45666777778888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcc-ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh------
Q 012519 179 FLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ------ 251 (461)
Q Consensus 179 ~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------ 251 (461)
.+..-+ ...+|..++++-++.|.|.+...+.++.+++...++++-.+-+++.+...++|.++||++++.++.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 987422 2278999999999999999999999999999999998899999999999999999999999998762
Q ss_pred -------------cCchhHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhH
Q 012519 252 -------------AGIFGPFVIFGLSGFLWVLVWLSAT-SSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (461)
Q Consensus 252 -------------~gwr~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (461)
-.|+++|...+...++..+...... |+.++..+ +..+......
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~-----------------------~~~~~~~~~~ 229 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP-----------------------SLGASGSAGL 229 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc-----------------------cccccccchH
Confidence 2488888888877766655544432 22221111 0111111145
Q ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhh
Q 012519 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT 397 (461)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~ 397 (461)
.+++++|.++...+..|++.....+...|++.|+.+..|.+..+++...+..+.+.++|++++.++..|+...
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~------- 302 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE------- 302 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------
Confidence 6899999999999999999999999999999999997799999999999999999999999999999998776
Q ss_pred HHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccc
Q 012519 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVL 458 (461)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~ 458 (461)
|.+...+.+...++.. ....++ .+.+....+.+.+.+..+|..++...+..|++...+
T Consensus 303 -k~Laf~a~~~ill~~~-~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~ 360 (422)
T COG0738 303 -KYLAFYALIAILLLLA-VALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVG 360 (422)
T ss_pred -HHHHHHHHHHHHHHHH-HHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccc
Confidence 3444444333333332 333333 334445556667777777888888887777654443
No 76
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=3.6e-26 Score=220.48 Aligned_cols=350 Identities=18% Similarity=0.137 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
...+..+++.....++.....+..++.+.+|+| +.....|+.+.+.++.++..++.|+++|.||||.+++.+.++..+|
T Consensus 43 i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG 121 (599)
T PF06609_consen 43 IASFAAFSLAVIAAYFVLVLPASILPYINADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVG 121 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhH
Confidence 333444555555555555666778899999999 4578899999999999999999999999999999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhH
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~ 257 (461)
.++++.+ +|...++++..+.|+|.|... .....++|..|.|.|+...++......+...+++.++..+..+.+|||.
T Consensus 122 ~Iv~atA--~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~ 198 (599)
T PF06609_consen 122 SIVCATA--QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWI 198 (599)
T ss_pred HHHhhcC--CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchH
Confidence 9999999 999999999999999987655 4566689999999999888888777767677888888887777799999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCC--C-Ccch-hHHHHH------------------HHhhcC---cccc--------
Q 012519 258 FVIFGLSGFLWVLVWLSATSSTPDRH--P-QISK-YELEYI------------------LREKQK---PLLM-------- 304 (461)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~------------------~~~~~~---~~~~-------- 304 (461)
|++.+++..+.+++.+++..++++.+ . +... ++..+. ...... ++..
T Consensus 199 ~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lv 278 (599)
T PF06609_consen 199 FYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLV 278 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHH
Confidence 99998887776655444443333221 1 1111 111111 000000 0000
Q ss_pred -----------CCC-CCCCCCChhHHHHhcc-hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCcc---ccchhhhh
Q 012519 305 -----------GNK-HKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAV 368 (461)
Q Consensus 305 -----------~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~ 368 (461)
.+. ...+.+..|. +++|+ |.+...++..++....++....+.|+.....++-++. ..++....
T Consensus 279 iG~~~Lv~F~~wE~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~ 357 (599)
T PF06609_consen 279 IGFVLLVAFVVWEWFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSP 357 (599)
T ss_pred HHHHHHHHHHHhhhhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhh
Confidence 011 1122334444 67787 5566667788888888889889999998888877663 56788888
Q ss_pred hHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH--HHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHh
Q 012519 369 PWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI--ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVN 446 (461)
Q Consensus 369 ~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (461)
.+++..++.++.|.+..++++- |+.+.++.+.+.. +.+.....++....+.+.++.+.+.+.........
T Consensus 358 ~~fg~~~g~~i~g~l~~~ir~~--------Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 358 VGFGSCAGAVILGLLFSKIRHI--------KWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred HHHHHHHHHHHHHHHHHHccch--------hHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 8888899999999999888754 3444444433332 33333333444444455555555555554444555
Q ss_pred hhhhcc-cccccccC
Q 012519 447 LQEIAP-QYSGVLHG 460 (461)
Q Consensus 447 ~~~~~p-~~~g~~~g 460 (461)
.+-..| ++.|++.|
T Consensus 430 ~ql~~p~~~ig~a~g 444 (599)
T PF06609_consen 430 AQLIVPDEDIGTATG 444 (599)
T ss_pred eEeeeCchHHHHHHH
Confidence 555555 45776655
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=3.3e-26 Score=247.41 Aligned_cols=330 Identities=15% Similarity=0.061 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHHhhhHhhh-hhhhhhcCCCc-hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHH---HHHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAI-VPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW---GVALWSL 176 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~-~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~i 176 (461)
...++..+.+.+....+.... ..+..+.+.+. ...++..+++.++++++++++|+++||+|||+++.. +.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 333444444444443433332 34444444433 457888999999999999999999999999997633 2223333
Q ss_pred HHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchh
Q 012519 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 256 (461)
..+.+... +++++++++|+++|++.+...|+..+++.+++|+++|++++++.+++.++|.++||++++++....+|++
T Consensus 98 ~~~~~~~~--~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 98 LAIYGFHL--NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHH--hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 33334445 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
.|+..++..++..++. +..++.++.......+.. ..+.....++.+.++|.++...+..++.
T Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1140)
T PRK06814 176 LVALLMGIAVLGWLAS-LFIPKTGNAAPDLKIDRN-----------------IIRSTITLLKYAKADKRIWLAILGISWF 237 (1140)
T ss_pred HHHHHHHHHHHHHHHH-hhCCCCCCCCCCCeeccc-----------------hHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 9955555444444433 344444322111100000 0000123567888999999999988888
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
++....+..++|.|+++.+|.++...+++.+...++.+++.++.|++.++..+++. .. .+.++.+++.+.+
T Consensus 238 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~-------~~--~~~~~~~~~~~~l 308 (1140)
T PRK06814 238 WLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLY-------VP--IGALLMGLFGLDL 308 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeee-------eh--HHHHHHHHHHHHH
Confidence 88888888999999999899999999999999999999999999999987665521 11 1111111111111
Q ss_pred hc--------------------cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 417 TA--------------------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 417 ~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
.. ..+.+..++..++.+.+.++..+...+..++..| +++|+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g 373 (1140)
T PRK06814 309 AFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIA 373 (1140)
T ss_pred HhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeH
Confidence 11 1333434444444555556666667788888877 46998876
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=3.1e-26 Score=248.56 Aligned_cols=319 Identities=18% Similarity=0.140 Sum_probs=230.7
Q ss_pred hhhHhhhhhhhhhcCCCc--hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH---hhccccccHH
Q 012519 116 VVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL---TPWAADTSLL 190 (461)
Q Consensus 116 ~~~~~~~~~i~~~~~~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~~~ 190 (461)
.....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++ +... ++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~ 104 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--GWFW 104 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--ccHH
Confidence 344455556666666554 44799999999999999999999999999999999988776655544 3345 7899
Q ss_pred HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------c-CchhHHHHH
Q 012519 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------A-GIFGPFVIF 261 (461)
Q Consensus 191 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~-gwr~~f~~~ 261 (461)
.++++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++.+. + +|++.+.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV 184 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 2 345555444
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
++...+..++..+..|+.++......+.+ .....+.....++.+++++.++...+..++..+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAAPEVFDKK---------------KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCccccccc---------------ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 44443333344444555543322110000 000001112356678888988888887777777777
Q ss_pred HHHHhHHHHHHHhhCCCcc-ccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccC
Q 012519 342 VILSWMPIYFNFVYHIDLR-QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (461)
....++|.|+++.+|++.. ..+++.+...++.+++.++.+++.||+++++ ++.++.++.+++++++....
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~---------~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG---------LVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc---------chhHHHHHHHHHHHHHHHhh
Confidence 8888999999998999988 8899999999999999999999999988762 22233344444444444444
Q ss_pred hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
+.+..++..++.+++.++..+...+++.+..| +++|+++|
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~ 361 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLA 361 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhH
Confidence 44444444455555556666667777777776 56888765
No 79
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.9e-25 Score=195.77 Aligned_cols=354 Identities=16% Similarity=0.098 Sum_probs=263.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
..+.+|........+...+.+.......+.|.+.+..+.+..|..++......+..+++..+|.++|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 45677888888888998888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
..++..++.+.+ +|+..+++.|.+.|+|.|+ .|...++-.|..|..+|+..+-.. ..+.+|.+....++..++.++
T Consensus 152 ~t~v~~~is~~s--pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGAS--PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCC--CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999999999998 899999999999999998887777 999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CcchhH----HHHHHHhhcCcccc--------------------CCC
Q 012519 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYE----LEYILREKQKPLLM--------------------GNK 307 (461)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~--------------------~~~ 307 (461)
||||.......+..+.+.+ .+..+|+|+..- +.++.+ .+++.+..++.... .+.
T Consensus 228 gwr~~l~~~~~pl~~~a~f-~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARF-LVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHHHHHH-HhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 9999988888665555544 444578776431 112221 22222222221000 000
Q ss_pred CCCCCCChhHHHHhcc---hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhh--CC-----------------Cccccchh
Q 012519 308 HKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVY--HI-----------------DLRQASWF 365 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~-----------------s~~~~~~~ 365 (461)
...+....+...++.. ++.+..+..+|...+.+++.........+... +. +...--.=
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 1112233334444422 34445566666667777776555555544321 00 00110111
Q ss_pred hhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhH
Q 012519 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (461)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (461)
..+..+....|.++.+++.||+||| ..+...++..+++++.+...........+.+.+-.+....+...+.
T Consensus 387 llitslaefPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 2344567889999999999999988 3556677777787777777766666777778888888888889999
Q ss_pred hhhhhccc-ccccccC
Q 012519 446 NLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 446 ~~~~~~p~-~~g~~~g 460 (461)
+..|++|. .|+++.|
T Consensus 458 YtPEVyPTavRatgvG 473 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVG 473 (528)
T ss_pred ecCcccchhhhhcchh
Confidence 99999996 4877766
No 80
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=6e-26 Score=223.78 Aligned_cols=348 Identities=19% Similarity=0.112 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHHHHHH--HhhhHhhhhhhhhhc-----CCCc--hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHH
Q 012519 98 VKVVSMLALALALCNAD--RVVMSVAIVPLSLAH-----GWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~-----~~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 168 (461)
........+..+..+++ ......+...+.++. ..+. .+.+|+.+.+.++.+++++++|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33444445555555554 344555555555532 1122 35599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 169 WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
++.+++.++.++++++ +|+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++...
T Consensus 124 ~~~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999995555444
Q ss_pred Hhh-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-cchhHHHHHHHhhcC--ccccCC-----------CCCCCCC
Q 012519 249 MSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQK--PLLMGN-----------KHKPATV 313 (461)
Q Consensus 249 ~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~-----------~~~~~~~ 313 (461)
.+. .+||..+.+..+++++..+. .++.||+|+..-+ .+.++.+........ ....+. .......
T Consensus 202 ~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 202 SKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred ccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 332 48999999999999888888 7778888865422 222333322222111 000000 0000000
Q ss_pred ChhHHHHhc----chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 314 IPPFRRLLS----KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 314 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
...++++++ ++.++.+.+..+.+..+......|.+.+++.. |.+... .....+.++..+++.+++.++.||+||
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gR 358 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGR 358 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 012233332 23344555555666666677778888888875 766443 556667777888888999999999998
Q ss_pred cCcchhhhHHHHHHHhhHHHHHHHHHHhcc------------ChhHHHHHHHHHHHHHHhhh-hhchhHhhhhhccc-cc
Q 012519 390 RGTSVTLTRKILQSIGFIAPGIALIGLTAA------------KSPVMASAWLTLAIGMKSFS-HSGFLVNLQEIAPQ-YS 455 (461)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~-~~ 455 (461)
| .++..+...+.++.+++... ...+..+...++....+... .+..+.+..|++|. .|
T Consensus 359 r---------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r 429 (513)
T KOG0254|consen 359 R---------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLR 429 (513)
T ss_pred H---------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHH
Confidence 8 34444444444444433211 11223333333333333333 34666788999984 46
Q ss_pred cccc
Q 012519 456 GVLH 459 (461)
Q Consensus 456 g~~~ 459 (461)
+.+.
T Consensus 430 ~~~~ 433 (513)
T KOG0254|consen 430 SKGA 433 (513)
T ss_pred hhhH
Confidence 6554
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=2e-25 Score=216.53 Aligned_cols=331 Identities=19% Similarity=0.159 Sum_probs=258.4
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
+..++.+.+++.++..+....++-+..++.-|+...+++..+..+...+.++++|.++||++|||+++.+.++.++..++
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 34456677777777777888888888788889999999999999999999999999999999999999999887665444
Q ss_pred hhc---cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhH
Q 012519 181 TPW---AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (461)
Q Consensus 181 ~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~ 257 (461)
.++ ....+.|.+++.-++.|++.+...|+..+++.|.+|+++...++++.+...++..++||.++|.+...+|-.+.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 332 22357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHH
Q 012519 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (461)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (461)
|.+.++..++..+......++.+++ + ..++. ..+.....++.+.++|.+...++..++.+
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~-~-~~~e~------------------~~~~l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPS-S-LPRER------------------FFSALREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccccccc-c-cchhh------------------hhhhHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9988876665544444433222111 1 11000 01112235666677787777777666666
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh
Q 012519 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (461)
+....+...+|.+.++.+|.++...|++.+..+++.++|.++.+++.+|++++ .++..+.+..+++++.+.
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLA 302 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHh
Confidence 66667778899999999999999999999999999999999999998887766 234455666677777777
Q ss_pred ccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
..++.+...+.+++.+.+.........+..++..|+ .+|++++
T Consensus 303 l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~s 346 (524)
T PF05977_consen 303 LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFS 346 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHH
Confidence 777777766666676777677777777888888885 5988765
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=7.5e-25 Score=209.94 Aligned_cols=328 Identities=13% Similarity=0.043 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
+.+...+++.+.....+.+.+|.+ .+++|.+..+.|++.+++.++..+++++.|+++||+|||+.++.++...+++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 344555566666666777777654 5678999999999999999999999999999999999999998877766654432
Q ss_pred h---hccc---cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 181 T---PWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 181 ~---~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
. .+.. .+.++.+++.+++.|++.+...+....+..|.. ++++..++......++|..+||++++.+.+ .+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~ 161 (396)
T TIGR00882 85 FFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDP 161 (396)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCc
Confidence 2 2220 012344567789999998888888888877754 344567788888899999999999998865 599
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|..|++.+++.++..++.+...+++|++++. +++ . +.++++....++++++|+|+++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 225 (396)
T TIGR00882 162 QIVFWLGSGFALILMLLLMFAKPKAPSSATV--ANA--------L------GANASAFSLKLALELFRQRKFWMFVLYVV 225 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCchhhhh--hcc--------c------ccccCCCCHHHHHHHHcCCcHHHHHHHHH
Confidence 9999999888887766665554444321100 000 0 00111222346788999999888777776
Q ss_pred HHHHHHHHHHHhHHHHHHHhh---CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH
Q 012519 335 MHSWGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (461)
+....+.....+.+.|+++.+ +.+....+...++..+...++.+..+++.||+++|+ ...++.++.++
T Consensus 226 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~---------~l~~~~~l~~l 296 (396)
T TIGR00882 226 GVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN---------ALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHH
Confidence 666666667778888888764 344556677888888888889999999999999882 23344444444
Q ss_pred HHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-cccc
Q 012519 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGV 457 (461)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~ 457 (461)
........++.+......++.+............+..+..|+ .+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at 343 (396)
T TIGR00882 297 RIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSAT 343 (396)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEE
Confidence 444444444544443333333333322222333344444443 3444
No 83
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.3e-25 Score=211.27 Aligned_cols=354 Identities=18% Similarity=0.112 Sum_probs=243.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhh--------hhcC--CCchh----HHHHHHHHHHHHHHhHhhhhhhhhh
Q 012519 95 SERVKVVSMLALALALCNADRVVMSVAIVPLS--------LAHG--WSRSF----SGIVQSSFLWGYLVSPIAGGTLVDY 160 (461)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~--~s~~~----~~~~~s~~~~~~~~~~~~~g~l~dr 160 (461)
++.........++.+-.++....+++..+.+. +.+| .++++ .+.+.+++.+|.++|++..|+++||
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~ 86 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR 86 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444555555666666666666665544433 3445 34433 4677789999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHhhcc-ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHH
Q 012519 161 YGGKIIMAWGVALWSLATFLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA 239 (461)
Q Consensus 161 ~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 239 (461)
+|||..+.++.++..++.++..++ ..+++.+++++|++.|+..|........++.|..|++.||..-.+.+.+..+|.+
T Consensus 87 ~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l 166 (485)
T KOG0569|consen 87 FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGIL 166 (485)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHH
Confidence 999999999999888887775554 1278999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-H-HHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC--CcchhHHHHHHHhhcCc-----------ccc
Q 012519 240 IGLVLSP-I-LMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP--QISKYELEYILREKQKP-----------LLM 304 (461)
Q Consensus 240 ~g~~~~~-~-l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~ 304 (461)
++..++. . +.+...|++.+.+..+++++..+. +.+.||+|+..- +.+++++++..+..... ...
T Consensus 167 l~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 167 LGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 9976653 2 334456999999888887775554 445699997542 33444444333221111 001
Q ss_pred CCCCCCCCCChhHHHHhcchhhHHH-----HHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHH
Q 012519 305 GNKHKPATVIPPFRRLLSKMPTWSI-----IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYL 379 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~ 379 (461)
++.+..+....+++++++++....- .+.......+.+....|...++++. |++..++.+.....++..++..++
T Consensus 246 ~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~ 324 (485)
T KOG0569|consen 246 EEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLV 324 (485)
T ss_pred HHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222345578899988654443 2233333344566777888888875 999999999999999999999999
Q ss_pred HHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc---C--h-hH---HHHHHHHHHHHHHhhh-hhchhHhhhh
Q 012519 380 GGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA---K--S-PV---MASAWLTLAIGMKSFS-HSGFLVNLQE 449 (461)
Q Consensus 380 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~-~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~ 449 (461)
+.++.||.||| .++..+..++.+..+++... . . .+ ..++..++....++++ .+..+-..+|
T Consensus 325 ~~~lid~~gRR---------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aE 395 (485)
T KOG0569|consen 325 SPFLIDRLGRR---------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAE 395 (485)
T ss_pred HHHHHHhcCCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHH
Confidence 99999999998 34444444444433332221 1 1 11 2234444455555555 4567788899
Q ss_pred hccc-cccccc
Q 012519 450 IAPQ-YSGVLH 459 (461)
Q Consensus 450 ~~p~-~~g~~~ 459 (461)
++|+ .|..+.
T Consensus 396 Lf~~~~R~aa~ 406 (485)
T KOG0569|consen 396 LFPQSARSAAQ 406 (485)
T ss_pred hCCccchHHHH
Confidence 9985 476654
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=2.1e-24 Score=207.04 Aligned_cols=264 Identities=12% Similarity=0.066 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-----cchH-HHHHHHHHHHHH
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKI-IMAWGVALWSLA 177 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~i~ 177 (461)
....++..+.........+|.+.++.|.+.+++|++..+... .+..+++|+++||+ |||| .+.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345566677777788889999999999999999999777765 58999999999999 8875 788888888888
Q ss_pred HHHhhccc-cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCch
Q 012519 178 TFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIF 255 (461)
Q Consensus 178 ~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr 255 (461)
..+.++.. ..+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|..+++.++..+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 77777762 245788888888889888999999999999999999999999999999999999999999999885 5999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHH
Q 012519 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (461)
..|++.+++.++..+.. +..||+++..++. + +. +++...++++++|+|.++..++..++
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~-~-~~------------------~~~~~~~~~~l~~~~~~~~~l~~~~l 220 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPP-R-SL------------------GEAVVGPLRDFFSRRGAWALLLLIVL 220 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCccccccc-c-hh------------------HHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 99999888776655443 3445543321110 0 00 00122356788999999887777777
Q ss_pred HHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhH-HHHHHHHHHHHHhhhhHhhc
Q 012519 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~ 390 (461)
..........+.+.++.+.+|+++.+.+++....+ ++.+++.+++|++.||+++|
T Consensus 221 ~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 221 YKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 66554444445556676768999999998876655 45788999999999999987
No 85
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=8e-25 Score=211.35 Aligned_cols=326 Identities=14% Similarity=0.051 Sum_probs=205.6
Q ss_pred HHHHHHHHHHhhhHhhhh-hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh--
Q 012519 106 LALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP-- 182 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-- 182 (461)
+..++.........+.++ .+.+++|++..++|++.+++.++..++++++|+++||+|||++++++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 344444444445555555 45566999999999999999999999999999999999999999887766655433211
Q ss_pred -ccc--c-ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHH
Q 012519 183 -WAA--D-TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (461)
Q Consensus 183 -~~~--~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 258 (461)
.+. . ..+...++++++.|.+.....+....+..+. .+++++.++......++|..++|++++.+.+ .+|++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 110 0 0111123334444444333334444443322 3467888899999999999999999999876 4899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHH
Q 012519 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (461)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (461)
++.+++.++..++.++..++++++.+..+ ++ +.++++....+.++.+|+|+++...+..++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~ 237 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAKVAN-AL---------------GANASAVSLKDALALLKLPKFWFLVLYVIGVAC 237 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhhcc-ch---------------hcccccccHHHHHHHccCCCeEeehHHHHHHHH
Confidence 99888887766666655544433211000 00 000111223456678899988877666655555
Q ss_pred HHHHHHHhHHHHHHHhh---CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHH
Q 012519 339 GFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (461)
.+.....+.|.|+.+.+ +.+..+.+.+.++..++..++.++.|++.||+++|+ .+..+.++.++...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~l~~~~~~l 308 (420)
T PRK09528 238 FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN---------ALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch---------hhHHHHHHHHHHHHH
Confidence 55566667788877653 455566788888888888999999999999999882 223333444444444
Q ss_pred HhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-ccccccc
Q 012519 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLH 459 (461)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~ 459 (461)
....++.+..+...++.+...+........+..+..| +.+++..
T Consensus 309 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~ 353 (420)
T PRK09528 309 SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIY 353 (420)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeee
Confidence 4445555544433333333444444444556666665 4566553
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=3.4e-24 Score=208.33 Aligned_cols=360 Identities=12% Similarity=0.040 Sum_probs=250.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
.+.++|..+.+......+. ...+.++...+.+++++|++..+++++.++. ....+++++.|++.||+|+|++++++.+
T Consensus 22 ~e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred cccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3455666555554444433 3345677888999999999999999998874 4456778889999999999999999999
Q ss_pred HHHHHHHHhhcccc----ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 173 LWSLATFLTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 173 ~~~i~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
+++++.++++++.+ ++++.+++.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|..+.+.+...+
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888621 589999999999999999999999999999996 7899999999999999997644444444
Q ss_pred HhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC---C--cchhHHH-HH-HHh----hcCc----------------
Q 012519 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP---Q--ISKYELE-YI-LRE----KQKP---------------- 301 (461)
Q Consensus 249 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~-~~-~~~----~~~~---------------- 301 (461)
.. .+|+..|++.+++.++..++.+.+.+++|.... + .++++.. +. .+. .+.+
T Consensus 179 ~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 179 FS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred HH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 33 368999999999988888877777766653221 1 1121111 00 000 0000
Q ss_pred --------------------------------cc--------------c-C-----------------CC--------C-
Q 012519 302 --------------------------------LL--------------M-G-----------------NK--------H- 308 (461)
Q Consensus 302 --------------------------------~~--------------~-~-----------------~~--------~- 308 (461)
.. . + .+ +
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 00 0 0 00 0
Q ss_pred CCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccc--cchhhhhhHHHHHHHHHHHHHhhhh
Q 012519 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ--ASWFSAVPWSVMAFTGYLGGLLSDM 386 (461)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--~~~~~~~~~~~~~i~~~~~g~l~dr 386 (461)
..+.....+++.+++..+|.+++..++.......+...+.++.+..-|.+.+. ...+.++.++++.+|++..|.+...
T Consensus 338 ~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~ 417 (591)
T PTZ00207 338 IAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW 417 (591)
T ss_pred CCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH
Confidence 00111126788889999999999999999999999999999888853663333 3347889999999999999999855
Q ss_pred HhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccccccc
Q 012519 387 LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGV 457 (461)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 457 (461)
..+|+......|...+.+..+ +.++.+++....+.....+..++.+.++|+.++.......|++.++-|+
T Consensus 418 ~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~ 487 (591)
T PTZ00207 418 SQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAK 487 (591)
T ss_pred HHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHH
Confidence 544432111223334444444 3333333333222234556667778888888888899999988766554
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.6e-24 Score=191.05 Aligned_cols=314 Identities=15% Similarity=0.170 Sum_probs=245.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
+..+..+.+..+----.....++.++++++|+|+|.+.+|+++++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34444444444433344567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-Cchh
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFG 256 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~ 256 (461)
.++-... +.+.++.+-.+.|.|.+......+.++.+.|| |+-+..+|+|.+...+|..+++.+...+.++. |||.
T Consensus 91 ~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 9997664 77888999999999999999999999999996 78899999999999999999999999998887 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
...+.+.++++.++.++.-. .+++ .. ..+....+-..++|+|.-|.+.+.+.++
T Consensus 167 aL~~WAl~allAl~~WlPq~-~r~~-~~------------------------~~~~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 167 ALGFWALLALLALLIWLPQA-LREQ-AA------------------------SIATKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhc-cccc-cc------------------------ccccccccccccccCchhHHHHHHHHhh
Confidence 99999999999888877652 1110 00 0000111223689999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
.+.+|....|+|.++.|. |+|+.++|.+.+...+.+++..+....+.+|..++ +.+......++.++++.+
T Consensus 221 S~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~--------r~~~~~~~~~~l~G~~G~ 291 (395)
T COG2807 221 SLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ--------RPLVVLALLLMLVGLVGL 291 (395)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc--------chHHHHHHHHHHHHHHHH
Confidence 999999999999999996 99999999999999999999999999999996665 233344444455555544
Q ss_pred hccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhc
Q 012519 417 TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA 451 (461)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (461)
.+.+....... .++.+...+..++.......+..
T Consensus 292 ~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs 325 (395)
T COG2807 292 LLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRS 325 (395)
T ss_pred HHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhc
Confidence 44443332222 34444444444454444444433
No 88
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=8e-26 Score=200.74 Aligned_cols=265 Identities=20% Similarity=0.162 Sum_probs=224.2
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
.++++-.++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+.++..+++++++. +++++++++|.+||+|.++
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg--~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG--NSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHhhhhHHH
Confidence 34556688899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHHhhcCchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 012519 206 ALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (461)
.+.+..++++|.+|+++ |++++|+...+.++|..+||++||.+.+..|.+.+|++.++++++-..+.++..++...+.+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 99999999999998664 89999999999999999999999999999999999999999999988888877655432211
Q ss_pred CcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccch
Q 012519 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (461)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 364 (461)
......++++++++|.++.........+.........++.+..+.+..+.-+.|.
T Consensus 256 -------------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~ 310 (464)
T KOG3764|consen 256 -------------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGL 310 (464)
T ss_pred -------------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceee
Confidence 1112246789999999998888777777777777888889888877744448899
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHH
Q 012519 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVM 424 (461)
Q Consensus 365 ~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
.+....+..+++..+.|.+.||++.. |......+++..+++.....+.++...
T Consensus 311 ~fLp~~~~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~ 363 (464)
T KOG3764|consen 311 AFLPASLSYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQ 363 (464)
T ss_pred eecccccchhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHH
Confidence 99999999999999999999999955 334555666666666655555555443
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=3.7e-25 Score=195.33 Aligned_cols=315 Identities=16% Similarity=0.073 Sum_probs=209.8
Q ss_pred hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchh
Q 012519 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (461)
Q Consensus 128 ~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 207 (461)
..+.+..-.|.+.+.+.+.+.+.++.+|.++||+|||+++++|++..++...+.+++ .|+..++++|++.|+.-| ..
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--~~F~afv~aR~l~Gi~kg-nl 138 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--RNFAAFVLARFLGGIFKG-NL 138 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhhhccC-ch
Confidence 334455678999999999999999999999999999999999999999999999999 999777778999999988 56
Q ss_pred hHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCchhHHHH----HHHHHHHHHHHHHHhcCCCC
Q 012519 208 PAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---QAGIFGPFVI----FGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 208 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---~~gwr~~f~~----~~~~~~~~~~~~~~~~~~~~ 280 (461)
..+.++++|.+++|+|+++++..+..+++|.++||.+|+++.+ ..|- .+|.. ..++...-.....++.||+-
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~-~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS-YPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc-CchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 7889999999999999999999999999999999999999987 3332 22222 11222221233445567765
Q ss_pred CCCCCcch-hHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchh-------hHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 012519 281 DRHPQISK-YELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP-------TWSIIVANAMHSWGFFVILSWMPIYFN 352 (461)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (461)
+.+++.++ .+..+..+...+. .+.....-...+||+. ...+.+..+++...+..+.++.+.+..
T Consensus 218 ~~rk~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~ 289 (451)
T KOG2615|consen 218 PLRKRNDEHSTLQEAADDRLAL--------LKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTH 289 (451)
T ss_pred cchhhcccccchhhhhhhhhhh--------cchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhc
Confidence 44433311 1111111110000 0000000112233332 223444455555555555566666656
Q ss_pred HhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHH
Q 012519 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (461)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (461)
..+|+++.+.|.+++..++...+.+.......+|.+.. .+..+...+..+.-.++.+..............+.
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLK 362 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHH
Confidence 77899999999999988877777776666666665522 12333344444444444555555555455555555
Q ss_pred HHHHhhhhhchhHhhhhhcc-cccccccCC
Q 012519 433 IGMKSFSHSGFLVNLQEIAP-QYSGVLHGI 461 (461)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl 461 (461)
.+......+....++....| ++||+++|+
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi 392 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGI 392 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHH
Confidence 55566666677777777777 579999874
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=7.8e-24 Score=206.07 Aligned_cols=350 Identities=12% Similarity=0.103 Sum_probs=222.1
Q ss_pred HHHHHHHHHHHHHHHhhhH-hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMS-VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLAT 178 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~ 178 (461)
+..+++..+...+..+.+. ....++.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 3444444444545444443 44556778899999999999999998898999999999999 999999999999999999
Q ss_pred HHhhccccccHHH-HHHHHHHHhhhhhchhhHHHHHHHhhcCch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 179 FLTPWAADTSLLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 179 ~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
++++++ ++... ++++|+++|+|.|...+...++++|.+|++ +|+++++++..+.++|..+||.+++++.++.|||
T Consensus 96 ~~~~~~--~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 96 FMTGMS--LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHh--ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 999988 65444 558999999999999999999999999877 4588999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCC----CCCcchhHHHHH------------HHhhcCccccCC-------------
Q 012519 256 GPFVIFGLSGFLWVLVWLSATSSTPDR----HPQISKYELEYI------------LREKQKPLLMGN------------- 306 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------~~~~~~~~~~~~------------- 306 (461)
+.|++.++..++ .++.+...++..++ .++.+.+..... .....+......
T Consensus 174 ~~F~i~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 252 (489)
T PRK10207 174 VTYNLCGAGLII-ALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTII 252 (489)
T ss_pred HHHHHHHHHHHH-HHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 999996553333 33333222321111 101011100000 000000000000
Q ss_pred --CCCCCCCChhHHHHhcchhhHHHHH--HHHHHHHHHHHHHHhHHHHHHHhhCCCcc----ccchhhhhhHHHHHHHHH
Q 012519 307 --KHKPATVIPPFRRLLSKMPTWSIIV--ANAMHSWGFFVILSWMPIYFNFVYHIDLR----QASWFSAVPWSVMAFTGY 378 (461)
Q Consensus 307 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~i~~~ 378 (461)
.++.+. .+.+|+|.+....+ ...+.+..+....+.++.+.++..+.+.. ....+.+...+..++..+
T Consensus 253 f~~~~~~~-----~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~p 327 (489)
T PRK10207 253 FFREAFKL-----DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASP 327 (489)
T ss_pred HHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHH
Confidence 000000 14555665444332 24444555556667788888753333210 122333344456667888
Q ss_pred HHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHH-------Hhcc---ChhHHHHHHHHHHHHHHhhhhhchhHhhh
Q 012519 379 LGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG-------LTAA---KSPVMASAWLTLAIGMKSFSHSGFLVNLQ 448 (461)
Q Consensus 379 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (461)
+.+++.||+++|+.......|... ++++.+++++. .... .+.++.+...++.+.+.++..+.......
T Consensus 328 l~~~l~~rl~~r~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~ 405 (489)
T PRK10207 328 ILAGIYTHLGSKGKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIA 405 (489)
T ss_pred HHHHHHHHHhhCCCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 889999999988654444434333 33333332221 1111 23344455555666667777777777777
Q ss_pred hhccc-ccccccC
Q 012519 449 EIAPQ-YSGVLHG 460 (461)
Q Consensus 449 ~~~p~-~~g~~~g 460 (461)
+..|+ .+|.++|
T Consensus 406 ~~aP~~~~g~~~g 418 (489)
T PRK10207 406 ALVPQHLMGFILG 418 (489)
T ss_pred HhChHHHHHHHHH
Confidence 77774 5777765
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=8.8e-24 Score=205.72 Aligned_cols=355 Identities=13% Similarity=0.082 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhh-hhh--cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVPL-SLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~--~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~ 177 (461)
..+.+..++..+..+...+.+|.+ .++ +|.+..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 334445555555555566666655 445 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE---RARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.++.+++ ++++.++++|++.|+|.|...+...++++|++|+++ |+.++++...+.++|..+||++++++.++.||
T Consensus 93 ~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMS--IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred HHHHHhc--ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 9999998 889999999999999999999999999999998754 88999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCcchhHHHHHHHhh----------cCccccCCCCC------------
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATS---STPDRHPQISKYELEYILREK----------QKPLLMGNKHK------------ 309 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~------------ 309 (461)
++.|++.++..++..+..+...+ +.|++.+..++++.+...... .......+...
T Consensus 171 ~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 171 HVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999988655554443333222 222111111111111000000 00000000000
Q ss_pred -------CCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccc----cchhhhhhHHHHHHHHH
Q 012519 310 -------PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAVPWSVMAFTGY 378 (461)
Q Consensus 310 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~i~~~ 378 (461)
..++.....+..|...+..+++...+.+..+....+.++.+.++..+.+... .+++.++..+..++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 0000000011122234455566666667777777777888877754443222 56777777777777777
Q ss_pred HHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhc---------cChhHHHHHHHHHHHHHHhhhhhchhHhhhh
Q 012519 379 LGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA---------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQE 449 (461)
Q Consensus 379 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (461)
+..++..|+.||+.......| +.+++++.++++..... ..+.++.+...++...+..+..+.......+
T Consensus 331 ~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~ 408 (475)
T TIGR00924 331 VLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTK 408 (475)
T ss_pred HHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 766666677665332222222 24445555444443331 2456666667777777888888899999999
Q ss_pred hccc-ccccccC
Q 012519 450 IAPQ-YSGVLHG 460 (461)
Q Consensus 450 ~~p~-~~g~~~g 460 (461)
..|+ .||+.+|
T Consensus 409 ~aP~~~~g~~~g 420 (475)
T TIGR00924 409 IAPQRLMGQMLG 420 (475)
T ss_pred hCCHHHHHHHHH
Confidence 9886 5888765
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=1e-23 Score=205.14 Aligned_cols=301 Identities=16% Similarity=0.106 Sum_probs=217.0
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcchH-HHHHHHHHHHHHHHHhhcccccc------
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAADTS------ 188 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~~~------ 188 (461)
...+.+.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++.+....+++.+++.+. ++
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~--~~~~~~~~ 98 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT--PDFSATGK 98 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC--CCCCcchH
Confidence 45566778899999999999999999999999999999997 67744 6778888888888877766 33
Q ss_pred HHHHHHHHHHHhhhhhchhhHHHHHHHhhc-CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCchhHHHH
Q 012519 189 LLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVI 260 (461)
Q Consensus 189 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~ 260 (461)
++.+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 456777888899988888888888899987 57899999999999999998888777665543 4579999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHH
Q 012519 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (461)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (461)
.+++.++..++.++..+|++++.+. +++++......+++++++|.++..++..++.....
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~~~~--------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSEIPK--------------------NIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAF 238 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCCCCc--------------------ccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9998888777766666665422110 00011122345678899999999888888888777
Q ss_pred HHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc-
Q 012519 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA- 419 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (461)
+....+.+.|.+...+ +....+.+.....++.+++.++.+++.||+|+| + ....+.++.+++.+.....
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-------~--~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 239 NIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-------I--LFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-------H--HHHHHHHHHHHHHHHHHHcc
Confidence 7776677777766555 445566677777888999999999999999987 2 2233333333333333322
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
++.+...+..++.+++.+...+..++...|..+
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTGLVWALVADTVD 341 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 233333444444555555566667777776643
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=6.6e-23 Score=196.91 Aligned_cols=317 Identities=11% Similarity=-0.038 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHhhh-HhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcc-hHHHHHHHHHHHHHHHHhh
Q 012519 105 ALALALCNADRVVM-SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~ 182 (461)
++..++.+.....+ ++..+.+.+++|.+.+|+|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555 555666778899999999999999999999999999999999965 7788988988888888888
Q ss_pred ccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhh--------cCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW--------FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+. ++++.+++.|++.|++.+...+...++..++ .....|.+..| .+|..+||.+++.+....+|
T Consensus 88 ~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 88 QV--TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred Hh--cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 88 8999999999999998877777666554222 22223444444 46888888888877433335
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
+ +|++.+++.++..++ .+..||.|+..++.+.+ .++....+.++++|+|+++...+..+
T Consensus 160 ~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~-------------------~~~~~~~~~~~~~k~~~~~~~~~~~~ 218 (418)
T TIGR00889 160 I-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMS-------------------IKVMLGLDAFILFKNKRMAIFFFFSM 218 (418)
T ss_pred H-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccC-------------------HHHHhhhhHHHHhcCCCeeeHHHHHH
Confidence 5 455666655555544 34556654322110000 00000113456889999888888888
Q ss_pred HHHHHHHHHHHhHHHHHHHhhCCCc--------cccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhh
Q 012519 335 MHSWGFFVILSWMPIYFNFVYHIDL--------RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (461)
+..........+.+.|+++. |.++ ...+...++..+..+++.++.|++.||+++| .++..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~ 288 (418)
T TIGR00889 219 LLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSL 288 (418)
T ss_pred HHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHH
Confidence 87776666778888888774 6554 4568888888889999999999999999988 2344444
Q ss_pred HHHHHHHHHHhccC-hh---HHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 407 IAPGIALIGLTAAK-SP---VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 407 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
++.++......... .. +..+...++.+...+...+....++.+..| +++|+++|
T Consensus 289 ~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g 347 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQG 347 (418)
T ss_pred HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 45554443333322 11 222223334444445555666677788887 45887765
No 94
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=6.2e-22 Score=189.34 Aligned_cols=265 Identities=12% Similarity=0.009 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHH--HHHHHHHHHHhHhhhhh-hhhhhcchHHHHHHHHHH-HH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIV--QSSFLWGYLVSPIAGGT-LVDYYGGKIIMAWGVALW-SL 176 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~~~~~~~~~-~i 176 (461)
+..+...++..+.......+.+|.+.++.|.+.+++|++ .++..+...+.++++++ ..||+||||..++.+.+. .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 556677888888888899999999999999999999997 46678888888888855 799999999876655432 22
Q ss_pred HHHHhh-cccccc-HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 177 ATFLTP-WAADTS-LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 177 ~~~~~~-~~~~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.....+ +....+ ...++..-++.++..+...+...++..|..++++++...+....+..+|..+|+.+.+++.+++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 211122 334445556667777888888899999999988889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (461)
|..|++.+++.++..+..++..|+++++.+. ++....++++.+|+|.++...+..+
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA------------------------PLARRASLFRFFRRPLAWSLLALAL 218 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc------------------------chhhHHHHHHHHcCcCHHHHHHHHH
Confidence 9999999988877666665554443221110 0001235678899999988888888
Q ss_pred HHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHH-HHHHHHHHHHHhhhhHhhc
Q 012519 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~ 390 (461)
+..........+.+.|+++ .|+++.+.+.......+ ..+++.++.|++.||++++
T Consensus 219 l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8888888888899999988 59999999998887764 5567789999999999988
No 95
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=1.7e-23 Score=207.62 Aligned_cols=315 Identities=16% Similarity=0.087 Sum_probs=219.7
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
.+.+..+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.+++ +|++.+++.|+++|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence 35566788899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (461)
.......++.|++++++|+.+..+ ......|..++++.++++.. +||+.+++..++.++.+++ +++.+|+|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 88888888888888888887 8999999999998877666 5566688765422
Q ss_pred c-chhHHHHHHHhhcC------cc------c-cCC--CCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q 012519 286 I-SKYELEYILREKQK------PL------L-MGN--KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (461)
Q Consensus 286 ~-~~~~~~~~~~~~~~------~~------~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
. +.++..+..++..+ .. . ..+ ......+...+.++++.|++....+...+..+.+.....-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 2 22333333222110 00 0 000 0001112234667788876555444444444332222222222
Q ss_pred HHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhH---HHH
Q 012519 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV---MAS 426 (461)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 426 (461)
.... +|.+ ........+.....+....+...|+.||| .....+.+..+++++...+..... ...
T Consensus 344 ~~~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
T KOG0255|consen 344 NVSG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHW 410 (521)
T ss_pred hhhh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 2222 2332 22333444446677777778999999877 455555555555555554443222 355
Q ss_pred HHHHHHHHHHhhhhhchhHhhhhhccc-cccccc
Q 012519 427 AWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLH 459 (461)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~ 459 (461)
....++.++.+..+...+.+..|+.|. .|+.+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~ 444 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAV 444 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 566667777777777778889999985 355543
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=5.2e-24 Score=192.63 Aligned_cols=357 Identities=14% Similarity=0.148 Sum_probs=247.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhc-C-------CCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcch
Q 012519 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-G-------WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (461)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~-------~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 164 (461)
..+++...+.+..++.+.+.+|...++.+.|.+...+ + .++...+.+..+..+|..+|++++|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 4567788899999999999999999999988887655 2 3456778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccc-----ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHH
Q 012519 165 IIMAWGVALWSLATFLTPWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA 239 (461)
Q Consensus 165 ~~~~~~~~~~~i~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 239 (461)
+++...+++..++++++++... .-.+++.+.|++.|+|.|+.+|...++.+|...+++||...+...+.+++|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 9999999999999998887621 23678899999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhc---------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCcccc
Q 012519 240 IGLVLSPILMSQA---------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLM 304 (461)
Q Consensus 240 ~g~~~~~~l~~~~---------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (461)
.|.+++-.+..-+ =||..|.+.++++++....-+ ..||+++...-.. .+.+...++.++....
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~-~~~~~a~~d~~k~~~~ 272 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVS-KKLKQAAGDMKKVLSV 272 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhh-cCHhhhhhcccccccc
Confidence 8888776664311 299999888887776544433 3355554331111 1111111111111000
Q ss_pred ---------CCCCCCCCCChhHHHHhcc---hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccch--------
Q 012519 305 ---------GNKHKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW-------- 364 (461)
Q Consensus 305 ---------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~-------- 364 (461)
...+.++.....+...+.. +.+...+..+|+.-.++|....+....++. .|+.+.....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~ 351 (538)
T KOG0252|consen 273 DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAE 351 (538)
T ss_pred ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHH
Confidence 0000111111112222222 456677888899999999998888888887 4776665544
Q ss_pred hhhhhH-HHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChh----HHHHHHHHHHHHHHhhh
Q 012519 365 FSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP----VMASAWLTLAIGMKSFS 439 (461)
Q Consensus 365 ~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 439 (461)
...+.. .+.+.|..+...++|++||+ .+...+++++.+..+.+....+. ...++...+..++..++
T Consensus 352 ~~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG 422 (538)
T KOG0252|consen 352 GNLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG 422 (538)
T ss_pred HHHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC
Confidence 111111 22233556777889999988 66677888888877776665441 12233333444444444
Q ss_pred h-hchhHhhhhhccc-ccccccCC
Q 012519 440 H-SGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 440 ~-~~~~~~~~~~~p~-~~g~~~gl 461 (461)
. .....+..|++|. .||+..|+
T Consensus 423 Pn~ttfivpaE~FParvR~t~hGI 446 (538)
T KOG0252|consen 423 PNATTFIVPAEIFPARVRSTCHGI 446 (538)
T ss_pred CCceeEEeehhhchHHHhhhhhhH
Confidence 3 4566778899995 59998774
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91 E-value=2.6e-21 Score=189.50 Aligned_cols=350 Identities=15% Similarity=0.104 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHhhhHhh-hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHHHHH
Q 012519 103 MLALALALCNADRVVMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~ 180 (461)
.+++..+...+..+.+... ...+.+++|.+..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444 445668999999999999988887777777899999999 59999999999999999998
Q ss_pred hhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHH
Q 012519 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE--RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (461)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 258 (461)
++++. ++.+.++++|+++|+|.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|
T Consensus 105 ~~~~~-~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 105 VAWSG-HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred HHHhc-ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 88861 356677889999999999999999999999997543 556889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---HHhcCCCCCCCC--CcchhHHHHHH-----HhhcCccccCCCCCCCC---------------C
Q 012519 259 VIFGLSGFLWVLVW---LSATSSTPDRHP--QISKYELEYIL-----REKQKPLLMGNKHKPAT---------------V 313 (461)
Q Consensus 259 ~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------------~ 313 (461)
++.++..++..+.. ....++..++.. ..+........ -...........+.... .
T Consensus 184 ~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (500)
T PRK09584 184 ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE 263 (500)
T ss_pred HHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99776544433322 223333211111 11111100000 00000000000000000 0
Q ss_pred ChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHH--hhCCCcc------ccchhhhhhHHHHHHHHHHHHHhhh
Q 012519 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF--VYHIDLR------QASWFSAVPWSVMAFTGYLGGLLSD 385 (461)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~s~~------~~~~~~~~~~~~~~i~~~~~g~l~d 385 (461)
....++.-+ ++.+.. +..++....++......+.++.. ..+.+.. ..+++.++..+..++..++.+++.+
T Consensus 264 ~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~ 341 (500)
T PRK09584 264 AFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN 341 (500)
T ss_pred HhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 000001111 222222 22334444555566666666543 1122211 2445556666666777777767667
Q ss_pred hHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh---------hHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-cc
Q 012519 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS---------PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YS 455 (461)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~ 455 (461)
|.++|.. . ...+.+++++.+++++.+..... .++.+...++...+..+..+.....+.+..|+ .|
T Consensus 342 ~l~~r~~---~--~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 342 KMGDRLP---M--PHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HhCcCCC---c--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 7665521 1 12334555555555544332211 33455556666777777778888888888885 58
Q ss_pred ccccC
Q 012519 456 GVLHG 460 (461)
Q Consensus 456 g~~~g 460 (461)
|.++|
T Consensus 417 g~~~g 421 (500)
T PRK09584 417 GFIMG 421 (500)
T ss_pred HHHHH
Confidence 88776
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.89 E-value=6.8e-20 Score=174.95 Aligned_cols=326 Identities=15% Similarity=0.063 Sum_probs=216.7
Q ss_pred HHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh----hhcchHHHHHH-HHHHHHHHHHhhcccc
Q 012519 112 NADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKIIMAWG-VALWSLATFLTPWAAD 186 (461)
Q Consensus 112 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~~~~~~~~~~ 186 (461)
.+......+.++.+.+++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++.+++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~-- 94 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA-- 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC--
Confidence 444555566667788899999999999999999999999999999999 59999988774 66666676777776
Q ss_pred ccHH-----------------HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 187 TSLL-----------------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLVLSPI 247 (461)
Q Consensus 187 ~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~ 247 (461)
++.+ .++++-.+..++.....+...++++|.+|+++| +.+.++.+.+.++|.++|+.++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 233333445567778888999999999998765 689999999999999999999987
Q ss_pred H--Hhhc-------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCC
Q 012519 248 L--MSQA-------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPAT 312 (461)
Q Consensus 248 l--~~~~-------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (461)
. .+.+ +.|..|++.+++.++..+...+..+|.|....+...++ + . ++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~-----~-------~~~~~~~ 241 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-E-----A-------APPSKHG 241 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-h-----c-------ccccccc
Confidence 5 2222 56889999988888888888888887654221110000 0 0 0000001
Q ss_pred CChhHHHHhc---c--hhhHHHHHHHHHHHHHHHHHHHhHHHHHHH-hhCCCccc----------cchhhhhhHHHHHHH
Q 012519 313 VIPPFRRLLS---K--MPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------ASWFSAVPWSVMAFT 376 (461)
Q Consensus 313 ~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------~~~~~~~~~~~~~i~ 376 (461)
....++++++ + |.++.+++..++.+++++.+..|.+.|+.+ .|+-++.. ..+......+...+.
T Consensus 242 ~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~ 321 (477)
T TIGR01301 242 EEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGIT 321 (477)
T ss_pred hhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112333333 2 678999999999999999999999988874 45543321 122334444555566
Q ss_pred HHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh---------------------hHHHHHHHHHHHHH
Q 012519 377 GYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS---------------------PVMASAWLTLAIGM 435 (461)
Q Consensus 377 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~ 435 (461)
+++..++.+|+|+| |.+..++.++.++++....+.+. .+..+..+...+..
T Consensus 322 s~~l~~l~~~~g~~--------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~ 393 (477)
T TIGR01301 322 SIGMEKLCRGWGAG--------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIP 393 (477)
T ss_pred HHHHHHHHHHhccc--------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHH
Confidence 67777888888753 23334444444444433322111 13344444555555
Q ss_pred HhhhhhchhHhhhhhccc---ccccccC
Q 012519 436 KSFSHSGFLVNLQEIAPQ---YSGVLHG 460 (461)
Q Consensus 436 ~~~~~~~~~~~~~~~~p~---~~g~~~g 460 (461)
....+..-++++.+..|+ ..|..+|
T Consensus 394 ~A~~~siPfal~s~~~~~~~~~~G~~mg 421 (477)
T TIGR01301 394 LAITYSIPFALASIRSSNLGAGQGLSMG 421 (477)
T ss_pred HHHHHHHhHHHHHHHccccCCCCcchhh
Confidence 666667777777777763 3466555
No 99
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=1.3e-26 Score=226.17 Aligned_cols=342 Identities=19% Similarity=0.181 Sum_probs=221.8
Q ss_pred HHHHHHHHHHHhhhHhhhhhhh--hhcCC---------CchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 105 ALALALCNADRVVMSVAIVPLS--LAHGW---------SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~---------s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
.++.+..+++....+...+... ..+.. +..+.+++.+...+|..+|++++|.++||+|||++++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4555777777777766655544 22222 223578999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccc---cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 174 WSLATFLTPWAADT---SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 174 ~~i~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
..++.++.+++ + +++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+.+
T Consensus 86 ~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 86 MIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 8 999999999999999999999999999999999999999999999999999999888766644
Q ss_pred hc---CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc-chhHHHHHHHhhcCc-----cccCCC---CCCCCCChhHH
Q 012519 251 QA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKP-----LLMGNK---HKPATVIPPFR 318 (461)
Q Consensus 251 ~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~ 318 (461)
.. +||..+++.++++++..+.. .+.||+|+..-.. +.++.++..++.... ...+.. ++.......++
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWR 242 (451)
T ss_pred ccccccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeee
Confidence 34 49999999988887655544 5679998754222 222333322221100 000000 00000113355
Q ss_pred HHhcchh----hHHHHHHHHHH-HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcc
Q 012519 319 RLLSKMP----TWSIIVANAMH-SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (461)
Q Consensus 319 ~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (461)
++++++. +...+....+. ....+....+.+.++++ .+.+.. -.......+...++.+++.++.||+|||+
T Consensus 243 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~-- 317 (451)
T PF00083_consen 243 DLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK-- 317 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccc--
Confidence 6666532 33333333333 22334445566666655 466655 23334445566777888889999999983
Q ss_pred hhhhHHHHHHHhhHHHHHHHHHHh-----ccCh----hHHHHHHHHHHHHHHh-hhhhchhHhhhhhccc-ccccccCC
Q 012519 394 VTLTRKILQSIGFIAPGIALIGLT-----AAKS----PVMASAWLTLAIGMKS-FSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
+...+....+++.+.+. ..+. ....+....+.....+ ...+..+.+..|++|. .|+++.|+
T Consensus 318 -------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~ 389 (451)
T PF00083_consen 318 -------LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGL 389 (451)
T ss_pred -------ccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 22333333333332221 1111 1222222222323333 2235556888999995 58777663
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=1.2e-19 Score=174.10 Aligned_cols=350 Identities=12% Similarity=0.075 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-cchHHHHHHHHHHHHHHHHh
Q 012519 104 LALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLT 181 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~ 181 (461)
++...+...+..+.+...+|. +.+++|.+..+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++.
T Consensus 14 l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 14 VVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 333344444444445445554 4567899999999999999999999999999999999 99999999999999998777
Q ss_pred hccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
+... .+...++++..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+..||++.|.
T Consensus 94 ~~~~-~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~ 172 (493)
T PRK15462 94 GASE-IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFG 172 (493)
T ss_pred HHhh-cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHH
Confidence 6541 22233444445555666777777889999999875 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC----CCCCcchhHHHH---------------HHHhh-cCcccc--------------C
Q 012519 260 IFGLSGFLWVLVWLSATSSTPD----RHPQISKYELEY---------------ILREK-QKPLLM--------------G 305 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------~~~~~-~~~~~~--------------~ 305 (461)
+.++..++.++..+...+..++ +.+..++++... ..... ...... -
T Consensus 173 iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
T PRK15462 173 LAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLA 252 (493)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776554444433332211111 011111110000 00000 000000 0
Q ss_pred CCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----hCCCccccchhhhhhHHHHHHHHHHH
Q 012519 306 NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV-----YHIDLRQASWFSAVPWSVMAFTGYLG 380 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~i~~~~~ 380 (461)
.....+.... +--|-..+..+.+...+.+..+....+-+..|.++. +|++ ....++.++..+..++.+++.
T Consensus 253 ~~~~~~~~~~---er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~ 328 (493)
T PRK15462 253 KIYRKAENQK---QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFL 328 (493)
T ss_pred HHHHhcCCHH---HHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHH
Confidence 0000000000 000001223333444444445555556666666653 2332 235677788888888888888
Q ss_pred HHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh--c---c----ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhc
Q 012519 381 GLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT--A---A----KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA 451 (461)
Q Consensus 381 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (461)
+++-.|..+|+.......|.. ++++.++++.+.+. . . .+.++.+...++...+..+..|...+.+.++.
T Consensus 329 a~lw~~l~~~~~~~s~~~Kfa--~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~la 406 (493)
T PRK15462 329 AWVVKESVAGNRTVRIWGKFA--LGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIE 406 (493)
T ss_pred HHHHHHHhcCCCCCCcHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhC
Confidence 888777755433333334443 33344444333221 1 1 13344445555566666777888899999999
Q ss_pred cc-ccccccC
Q 012519 452 PQ-YSGVLHG 460 (461)
Q Consensus 452 p~-~~g~~~g 460 (461)
|+ .+|..+|
T Consensus 407 P~~~~g~~mg 416 (493)
T PRK15462 407 IPGVTGVLTG 416 (493)
T ss_pred hHHHHHHHHH
Confidence 96 4887765
No 101
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=1.2e-19 Score=164.79 Aligned_cols=280 Identities=15% Similarity=0.139 Sum_probs=228.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHH
Q 012519 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (461)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 171 (461)
...++||.++++.++..+.+.+.+..+++.......-|+ +...+-|+.-+|++.+....+++-|+.|++|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 356788999999999999999999999999999999999 8888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccc----ccHH--HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 012519 172 ALWSLATFLTPWAAD----TSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (461)
Q Consensus 172 ~~~~i~~~~~~~~~~----~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 245 (461)
.+.++|..+-..+.. +.++ ....+..+.+.+.-.....-..+..-|+++++|..+..+-..+..+|..+|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 999999998666521 4556 7778889999888877777778888999999999999999999999999999988
Q ss_pred HHHHhhc------Cchh--HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhH
Q 012519 246 PILMSQA------GIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (461)
Q Consensus 246 ~~l~~~~------gwr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (461)
..+..+- .|-. .|+..+.++.+.+++..+..+++|+..+....... .........
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~-----------------~~~~f~~si 259 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL-----------------QDASFPKSI 259 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh-----------------hcCcHHHHH
Confidence 8887643 3554 35555555555556666666665554432211111 122245678
Q ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
++.++|+++....+.+......+++..+.+-.-+... |++...+|+......+++++++++.|.+.||.++-
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPS-GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccc-cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 8999999999999999998888888888777666553 88888999999999999999999999999998765
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.1e-21 Score=166.36 Aligned_cols=341 Identities=15% Similarity=0.152 Sum_probs=237.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVA 172 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~ 172 (461)
..+|...+..+++..|-+++..-..+....++..|.+++.++..++.+.|.....+..+++|++.|| +|-|..-++-+.
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 3456677788888888888888888888899999999999999999999999999999999999996 788887777777
Q ss_pred HHHHHHHHhhccc-cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012519 173 LWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 173 ~~~i~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 251 (461)
+..+|.++++... .+.+|.+.++|++.|+|.-....+.++++.-|+..|+.+.++|+......+|..+--.+.+++.+.
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 7777777655431 278999999999999998888889999999999999999999999999999998887777777765
Q ss_pred cCc------hhHH---HHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhc
Q 012519 252 AGI------FGPF---VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS 322 (461)
Q Consensus 252 ~gw------r~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (461)
.+- +... +..+...+..-+...... ...++.+++..+..... ..+.....+.++ -
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l--------g~~D~rAerilh~e~g~------~Ge~pkLtdv~~--f 262 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL--------GLSDDRAERILHLEEGF------LGEEPKLTDVNT--F 262 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh--------hhhhhHHHHHHhhhcCc------ccCCcccccccc--c
Confidence 431 1111 111111111111111110 00111122221111100 000111111111 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHH
Q 012519 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ 402 (461)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~ 402 (461)
.|.+|.+.++.+++..+.+.+...-|.++++.+|+|+..++.+.+.......+..++.|.++||.|++ .+.+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n--------~~wv 334 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN--------LWWV 334 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce--------ehhH
Confidence 47899999999999999999999999999999999999999999999999999999999999999988 1222
Q ss_pred HHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 403 SIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
..+.+....+-..+.++ .+.....+.+.+..+.......|.++..+.|+ +-|++.|
T Consensus 335 ~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTayg 391 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYG 391 (459)
T ss_pred HHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHH
Confidence 22222222222222222 11122234444444555556678888888886 5888776
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.86 E-value=4.4e-19 Score=172.49 Aligned_cols=301 Identities=15% Similarity=0.074 Sum_probs=200.7
Q ss_pred HhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcch-HHHHHHHHHHHHHHHHhhcccc----ccH
Q 012519 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAAD----TSL 189 (461)
Q Consensus 119 ~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~----~~~ 189 (461)
......+.+++|++..++|++.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....+. ..+
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 345566778899999999999999999999999999999998 7875 5666777777777665544411 224
Q ss_pred HHHHHHHHHHhhhhhchhhHHHHHHHhhc-CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCchhHHHHH
Q 012519 190 LALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIF 261 (461)
Q Consensus 190 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~~ 261 (461)
+.+++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+|+..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 56666777777777777777889999988 56889999999888888888888766554433 24688888888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
++++++..+..++..+|+++..+ +++.+...+++.++|||.++..++..++......
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~ 246 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEV-----------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVV 246 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCC-----------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 88777766655555544322110 0111233567788999999988887777666665
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHH-HHHHHh-cc
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI-ALIGLT-AA 419 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 419 (461)
......++|.+...+ ++...+.+.....+..+++.++.+++.||+|+| +.... +.+...+ ...... ..
T Consensus 247 ~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-------~~~~~--~~~~~~~~~~~~~~~~~ 316 (444)
T PRK09669 247 TRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-------RAFKW--TIVAFVILSALIFFIPP 316 (444)
T ss_pred HHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------HHHHH--HHHHHHHHHHHHHHhCc
Confidence 555555555444333 223334445555567788888999999999987 22222 2222221 221222 22
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
++.+..++..++.+.+.+...+..+++..|+.+
T Consensus 317 ~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d 349 (444)
T PRK09669 317 SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVD 349 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344444444455566666667777888887764
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.85 E-value=1.3e-18 Score=164.27 Aligned_cols=322 Identities=15% Similarity=0.094 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc-chHHHHHHHHHHHHHHHHhhc
Q 012519 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKIIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~~ 183 (461)
...+++.+.....+.|.++.+-++.|.|..|+|.+.+...+...+.++++|.++||++ +||.+.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566667778888889999999999999999999999999999999999986 677887877877777777777
Q ss_pred cccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHH-HHHHHhhcC---chhHHH
Q 012519 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL-SPILMSQAG---IFGPFV 259 (461)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~~~g---wr~~f~ 259 (461)
. ++++.+++.-++..+......|...++.-+... +++.-.|-.-...++|.+++... +..+....+ ....++
T Consensus 88 ~--~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 88 S--SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred h--ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 7 889998888888888888888899998888874 44556666667777777776544 233333333 234566
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHH
Q 012519 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (461)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (461)
+.+...++.....+ ..|+.|.+++. +...++....+..+++|+|+++...+..++....
T Consensus 164 i~~~~~~ll~~~~l-~lp~~~~~~~~--------------------~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 164 IAAILSLLLAGFAL-FLPKTPPKRSA--------------------KESVKKLLGLDALKLLKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred HHHHHHHHHHHHHH-hCCCCcccccc--------------------CCCcccccchHHHHHhcCccHHHHHHHHHHHHHH
Confidence 66655544443333 34555422111 1111112223445899999999999999999999
Q ss_pred HHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc
Q 012519 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (461)
......+.+.|+++..|.+....+.+.++..+..++.-+..+++.+|+|.+ .++.++.+..++=..++...
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHh
Confidence 999999999999997447777778877787788888888888888888876 45566666666665555555
Q ss_pred -ChhHHHHHHHHH----HHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 420 -KSPVMASAWLTL----AIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 420 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
++.+..++...+ -+..++........++.+..|+ .++++.|
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~ 340 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQG 340 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHH
Confidence 333333333333 4555666677778888888885 4777655
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.83 E-value=3.7e-19 Score=172.15 Aligned_cols=302 Identities=18% Similarity=0.185 Sum_probs=229.1
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh----hhcchH-HHHHHHHHHHHHHHHhhcc-c-c----cc
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKI-IMAWGVALWSLATFLTPWA-A-D----TS 188 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~~~~~~~~~~i~~~~~~~~-~-~----~~ 188 (461)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||| .++++.+..+++.++.... + . ..
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456677788999999999999999999999999999999 899776 5567878888877776654 1 0 12
Q ss_pred HHHHHHHHHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CchhHHHH
Q 012519 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVI 260 (461)
Q Consensus 189 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------gwr~~f~~ 260 (461)
...+.+..++..++.........++..|..+ +++|.+..++-..+..+|..+...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345667777789989899999999999997 578999999999999999877777666665432 59999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHH
Q 012519 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (461)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (461)
.+++.++..++..+..+|.+++.+ +++++.+..+.++.+++||.++...+..++.....
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~---------------------~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVT---------------------EQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccc---------------------ccccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 999888888888887777221111 12223334556789999999999999999999998
Q ss_pred HHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc-
Q 012519 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA- 419 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (461)
.......++|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+ ....+.+..+++.+.....
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~---------~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK---------VYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee---------ehhhhHHHHHHHHHHHHHHH
Confidence 888889999999987776 55677777888899999999999999999983 2233333333333333322
Q ss_pred -ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 420 -KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 420 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
++.+..++..++.+.+.+......+++..|+.+
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id 345 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVID 345 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchh
Confidence 466666666667777777777777888887775
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.83 E-value=6.4e-19 Score=171.26 Aligned_cols=342 Identities=12% Similarity=-0.006 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc-----chHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVAL 173 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~ 173 (461)
..+.++...++..+..........+.+.+++|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 345556666777777644445566777778999999999999999999998655 999999998 77788888777
Q ss_pred HH-HHHHHhhccccccHH-HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHH---HHHHHHHHHHHHHHHHHHHHHH
Q 012519 174 WS-LATFLTPWAADTSLL-ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA---VAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 174 ~~-i~~~~~~~~~~~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~G~~~g~~~~~~l 248 (461)
.+ ++....+.. ++.. ...+..++.+++.+...+++-++..|..+ +++... .++......+|..+|+.+++.+
T Consensus 105 ~~~~~~~~l~~~--~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 105 GSAILYGLLPGK--VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 63 444444443 4544 44448899999999999999999999998 555443 3333444568999999999999
Q ss_pred HhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhH
Q 012519 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD-RHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (461)
Q Consensus 249 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (461)
.++++||..|++.+++.++..+. ..+.+|++. ..++..+++.......... .....++.....++.+++|.++
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~i~ 255 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFV-SNLSKERRAFVRPRIGTYLEMNMALLTLG-----VLANVKVQILGLRGAIQLLEIA 255 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHH-HHhcccccccccccccccchhhhhhhhhh-----HHHHHHHHHHHHHHHHhcHHHH
Confidence 99999999999998888776443 344455431 1111000000000000000 0000001123455667888888
Q ss_pred HHHHHHHH-HHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhh
Q 012519 328 SIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (461)
Q Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (461)
...+..++ +.........+. .+.++..|+++...|.+....+++.+++..+.+++.+|++.| .++.++.
T Consensus 256 ~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~~ 325 (468)
T TIGR00788 256 KPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVTT 325 (468)
T ss_pred HHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHH
Confidence 76665555 222211111111 122345799999999999999999999999998888888766 3334444
Q ss_pred HHHHHHHHHHh-c---------cChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 407 IAPGIALIGLT-A---------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 407 ~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
++.+++.+... . .++.+......++.....++.......++.+..|+ ++|+..|
T Consensus 326 ~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 326 LLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFA 390 (468)
T ss_pred HHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHH
Confidence 44444332211 0 12222233334445555666666778888888774 5777654
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.82 E-value=2.3e-18 Score=158.16 Aligned_cols=241 Identities=12% Similarity=0.052 Sum_probs=174.0
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------------- 251 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------------- 251 (461)
.+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+.++++|..+||.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 78999999999999999999999999999999999999999999999999999999999988732
Q ss_pred -cCchhHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHH
Q 012519 252 -AGIFGPFVIFGLSGFLWVLVWLSA-TSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSI 329 (461)
Q Consensus 252 -~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (461)
.+|+++|++.+.+.++..+++.+. .||.+++.. ++ ...++. ...++.+++|.++..
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~----~~---------------~~~~~~---~~~~~~~~~~~~~l~ 145 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV----AR---------------VSSGDT---TQKTSAFQFTHLVLG 145 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc----cc---------------cccccc---cchhhHHhhHHHHHH
Confidence 469999997777655555444333 222211100 00 000000 112256778889988
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHh--hCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhH
Q 012519 330 IVANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (461)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (461)
.+..+++.....+...|.+.|+.+. +|+++.+.+...+....+.++|+++++++.||++++ | .+ .++.+
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~-------~-~l-~~~~~ 216 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG-------R-YL-AFNAF 216 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------H-HH-HHHHH
Confidence 8888888889999999999999864 689999999999999999999999999999999977 2 22 23333
Q ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccccccccc
Q 012519 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLH 459 (461)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~ 459 (461)
+..++.++....+... ....+++.+++.+..+|...+...+..|++.+++.
T Consensus 217 l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~as 267 (310)
T TIGR01272 217 LAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGS 267 (310)
T ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 3333333332323322 22334455566666777777777776776555443
No 108
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=5.7e-18 Score=165.72 Aligned_cols=306 Identities=11% Similarity=-0.013 Sum_probs=199.9
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh----hhcc-hHHHHHHHHHHHHHHHHhhcccc--c--cHHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGG-KIIMAWGVALWSLATFLTPWAAD--T--SLLA 191 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~~~~i~~~~~~~~~~--~--~~~~ 191 (461)
....+.+.+|++..++|.+..+..+.-++..|+.|.++| |+|| |+.++++.+..+++.++....+. + .++.
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 445566778999999999999999999999999999999 6698 56777788887777666544310 1 1345
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhc-CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cCchhHHHHHHH
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------AGIFGPFVIFGL 263 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~ 263 (461)
+++..++.+++.........+++.|.. ++++|.+..++-..+.++|..+.+.+...+.+. .+|+....+.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 566677778888888888999999998 588999999997777787766666555443322 246666666666
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
+.++..+..++..+|.++..... .+.+++......++.+++||.++.+++..++........
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~------------------~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQV------------------SAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred HHHHHHHHHHcCceecCCccccc------------------cccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 66665555555555543211000 000111223345566779999998888888888777777
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH---hccC
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL---TAAK 420 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 420 (461)
..+.++|.+...+ +....+.+.....++.+++.++.+++.||+|+| +...........+...... ....
T Consensus 251 ~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (473)
T PRK10429 251 NGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-------ILWAGASIFPVLSCGVLLLMGLAAPH 322 (473)
T ss_pred hhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHhccCch
Confidence 7777766665433 444556666666688899999999999999988 2222222211111111111 1122
Q ss_pred hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
+.+..++..++.+...+...+..+++.+|..+
T Consensus 323 ~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id 354 (473)
T PRK10429 323 NALLIVIAGILLNIGTALFWVLQVIMVADTVD 354 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333333344445555566667777877755
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.81 E-value=1.6e-17 Score=161.76 Aligned_cols=299 Identities=11% Similarity=0.021 Sum_probs=183.7
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh----cchHHH-HHHHHHHHHHHHHhhccc---cc--cHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY----GGKIIM-AWGVALWSLATFLTPWAA---DT--SLL 190 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~~~~~~---~~--~~~ 190 (461)
....+.+.+|++..++|.+.+...+..++..++.|+++||. ||||.. +++.+...+..++....+ .+ ..+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 34567777899999999999999999999999999999996 777644 555554544444321111 01 233
Q ss_pred HHHHHHHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHH-----HHHHHHHHHHHHHHhhc--CchhHHHHHH
Q 012519 191 ALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFT-----SGNAIGLVLSPILMSQA--GIFGPFVIFG 262 (461)
Q Consensus 191 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~G~~~g~~~~~~l~~~~--gwr~~f~~~~ 262 (461)
.+++..++.+++.+...+...++..+..+ +++|.+..++-..+.+ +|..++|.+++...... +|.....+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 34555667788888888878888777664 4678887776654433 44555555554321111 1211112223
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHH
Q 012519 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (461)
+++++..+......||+++.+. ++......++.++|||.++...+..++.......
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~~------------------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~ 246 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRIV------------------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFA 246 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCCc------------------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 3333333333333333321110 1112234577899999999999988888888888
Q ss_pred HHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhcc--C
Q 012519 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA--K 420 (461)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 420 (461)
...+.|.|+++.+|.+....++......++.+++.++.+++.||+++| + .+.++.++..++.+.+... .
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-------~--~~~~g~~~~~i~~~~~~~~~~~ 317 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-------N--TFLIGALLGTCGYLLFFWVSVW 317 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-------H--HHHHHHHHHHHHHHHHHHcCch
Confidence 888888899888887766555544444566788889999999999987 2 2233333333333333232 2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
+.+......++...+.+...+...+...+..+
T Consensus 318 ~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~ 349 (448)
T PRK09848 318 SLPVALVALAIASIGQGVTMTVMWALEADTVE 349 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333333444445555666666777777665
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=1.1e-16 Score=148.45 Aligned_cols=322 Identities=16% Similarity=0.090 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHhhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH--HHH-HHH
Q 012519 105 ALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW--SLA-TFL 180 (461)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~--~i~-~~~ 180 (461)
.+.++..++.....-+..+...+ ..|++.+++|.+.++..+...+.+++.|.++||+|.||-++....+. ..+ .+.
T Consensus 13 s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 13 SLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 34444444545566666666555 48999999999999999999999999999999999666544333222 222 222
Q ss_pred hhccc--cccH-HHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhH
Q 012519 181 TPWAA--DTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (461)
Q Consensus 181 ~~~~~--~~~~-~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~ 257 (461)
..+.+ ..|+ ...+++-+..|++.....++.-+++.++. ++.+.-.|-.-+..++|.+++..++|.+.+. +-+..
T Consensus 93 ~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~ 169 (412)
T PF01306_consen 93 YVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNII 169 (412)
T ss_dssp HTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHH
Confidence 22220 0233 23344445556666666677777776664 5567777888889999999999999999873 55778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHH
Q 012519 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (461)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (461)
||+....+++..++.++..|+.+++....+.+ ..++++...++..+++|+|++|.+.+......
T Consensus 170 fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~ 233 (412)
T PF01306_consen 170 FWIASAAAIILLLLLLLLKPDVPPQAEVADAL----------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVA 233 (412)
T ss_dssp HHHHHHHHHHHHHHHHSS---SSSSS-SSTTS----------------SS------HHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCchhhhhhccc----------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHHH
Confidence 88777666666555555554444332111000 11112223345678999999999998888888
Q ss_pred HHHHHHHHhHHHHHHHhhC---CCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHH
Q 012519 338 WGFFVILSWMPIYFNFVYH---IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (461)
..+..+....+.|....+. .+....|++.++.-+..++.-.+.+++.+|+|.| ..+.++..++.+=..
T Consensus 234 ~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 234 AIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHH
Confidence 8888888888888876432 3345577888888888888889999999999988 344455566777777
Q ss_pred HHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccc
Q 012519 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQY 454 (461)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 454 (461)
+....++.+.....-.+-..-..+......-+..+..|++
T Consensus 305 ~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r 344 (412)
T PF01306_consen 305 GSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR 344 (412)
T ss_dssp HHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG
T ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh
Confidence 7777788776666666666666666666777777777654
No 111
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=4.1e-18 Score=165.88 Aligned_cols=292 Identities=16% Similarity=0.149 Sum_probs=230.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 178 (461)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45566677777777777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccc-------------------c----------------------------cc--HH-HHHHHHHHHhhhhhchhh
Q 012519 179 FLTPWAA-------------------D----------------------------TS--LL-ALLAMRAVVGLAEGVALP 208 (461)
Q Consensus 179 ~~~~~~~-------------------~----------------------------~~--~~-~l~~~r~l~G~~~g~~~~ 208 (461)
+++++-+ . .+ +| .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 9876430 0 00 33 567789999999999999
Q ss_pred HHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------C-chhHHHHHHHHHHHHH
Q 012519 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------------------G-IFGPFVIFGLSGFLWV 269 (461)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------------------g-wr~~f~~~~~~~~~~~ 269 (461)
...+|+-|...+++-+..+|+......+|.++|-++++++...+ | |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986522 2 6777888888888888
Q ss_pred HHHHHhcCCCCCCCCCcchhHHHHHHHhhc-CccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHH
Q 012519 270 LVWLSATSSTPDRHPQISKYELEYILREKQ-KPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (461)
+..+++.++.|+..++.+..+.+....+.. ........+.-+.....++++++||.+....+...+....+.++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 888888766666554322221111111110 0000000011123345678899999999999999999999999999999
Q ss_pred HHHHHhhCCCccccchhhhhhHHH-HHHHHHHHHHhhhhHhhc
Q 012519 349 IYFNFVYHIDLRQASWFSAVPWSV-MAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~~-~~i~~~~~g~l~dr~~~~ 390 (461)
-|++..||.++..+..++....+. ..+|.+++|++.+|+.-+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999988776664 477889999999998765
No 112
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.79 E-value=1.1e-15 Score=147.10 Aligned_cols=305 Identities=19% Similarity=0.103 Sum_probs=219.8
Q ss_pred hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHH-HHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHH
Q 012519 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM-AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (461)
Q Consensus 134 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 212 (461)
+..++..++..+..++..|+.|.++|+-|+||.+ .+..++..+++++..+....+++...+.-++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999999999877644 445555555666666653355666666667777788888999999
Q ss_pred HHHhhcCchhh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCchhHH
Q 012519 213 MVARWFPQTER--------------------------ARAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIFGPF 258 (461)
Q Consensus 213 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~gwr~~f 258 (461)
++.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999998888889988877776655432 2248888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCc-chhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHH
Q 012519 259 VIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (461)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (461)
.+.++.-++..+..++..|+.|+.++.. ...-..... ++....++++.|.|.+...++..+++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~l~~t~k~~~~~~~~~~fLia~~l~~ 294 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF---------------KRLWRTFKEIRKLRQLFLFLIAYFLYS 294 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH---------------HHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 8888888888888888888877632111 111111000 112235667778899999999999999
Q ss_pred HHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHH-HHHHHHH
Q 012519 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP-GIALIGL 416 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 416 (461)
-+...+......|.++.+|++..+...+..+..+.+++|+++.|++.||+|.|. +..+...++.. .+.+...
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~-------~~~l~~~l~~~~~i~~~g~ 367 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT-------KRTLLISLILWIIIPLYGL 367 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-------hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999882 22222222222 2222222
Q ss_pred h-------ccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 417 T-------AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 417 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
. ..++.+..+++.++.+.+.|...+..-++..++.|+ +.+..+|
T Consensus 368 ~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFg 419 (477)
T PF11700_consen 368 FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFG 419 (477)
T ss_pred HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHH
Confidence 1 134455555566667777777777778888888885 4554433
No 113
>PRK11462 putative transporter; Provisional
Probab=99.78 E-value=5.2e-16 Score=150.87 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=177.7
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcchH-HHHHHHHHHHHHHHHhhcccccc----HHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAADTS----LLA 191 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~~~----~~~ 191 (461)
....+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+..+++.+++...+..+ +..
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4455667889999999999999999999999999999995 78765 55567777777776655442111 445
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CchhHHHHHHH
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFGL 263 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------gwr~~f~~~~~ 263 (461)
+++.-++..++.......-.++..|..+ +++|.+..++...+..+|..+++.+...+.+.. +|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 6666777788888888888999999986 788999999999999999888887766555443 47777777777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
+.+++.++.+...+|+++..+ ++......++..++||.++.++...++........
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~ 247 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPP------------------------TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVR 247 (460)
T ss_pred HHHHHHHHHHhcceeccCCCc------------------------cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 766666555555555432110 01112345678889998888777766666665555
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.....+|.+...|. +...+.+.....++++++.++++++.||+++|
T Consensus 248 ~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 248 GGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 55555555554443 23344566677788889999999999999887
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.77 E-value=4.3e-16 Score=145.78 Aligned_cols=304 Identities=16% Similarity=0.125 Sum_probs=232.3
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcchH-HHHHHHHHHHHHHHHhhcccc----ccHHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAAD----TSLLA 191 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~----~~~~~ 191 (461)
++-.+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +||+| .++.+.+..++.+.++-.+++ .+...
T Consensus 35 Ll~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~y 114 (467)
T COG2211 35 LLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIY 114 (467)
T ss_pred HHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHH
Confidence 3445667789999999999999999999999999999995 78654 677787888888888877731 34566
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCchhHHHHHHH
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFGL 263 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~~~~ 263 (461)
.++...+.+++.........++.+|..+ ++||.+..++-+.+.++|..+...+...+.. ..||+...++.++
T Consensus 115 a~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~v 194 (467)
T COG2211 115 ALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGV 194 (467)
T ss_pred HHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHH
Confidence 7778889999999999999999999884 7899999999999999998777776666654 3478888888888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHH
Q 012519 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (461)
++++..+++++-.+|++.+.... +...+.+....+..+++||++...++..++...+....
T Consensus 195 i~~i~~l~~~~~v~ER~~~~~~~-------------------~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~ 255 (467)
T COG2211 195 IGVILLLFCFFNVKERVVETQPT-------------------KTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIR 255 (467)
T ss_pred HHHHHHHHHHHHhhcccCccccC-------------------cccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 88888888888877776532210 11122223344557889999999999888888888888
Q ss_pred HHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhc--cCh
Q 012519 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA--AKS 421 (461)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 421 (461)
.....+|.+...|.+.............+.+++.++..++.+|+|+| + +...+.++..++.+++.+ .++
T Consensus 256 ~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-------~--~~~~~~~~~~i~~~~~~f~~~~~ 326 (467)
T COG2211 256 GSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-------K--LFLIGLLLLAVGYLLLYFTPAGS 326 (467)
T ss_pred hhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-------H--HHHHHHHHHHHHHHHHHhhcCcc
Confidence 88889999888888887887787777778888899999999999998 2 333333333333333333 334
Q ss_pred hHHHHHHHHHHHHHHhhhhhchhHhhhhhcc
Q 012519 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP 452 (461)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 452 (461)
....+++.++...+.+...+..+++++|+..
T Consensus 327 ~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD 357 (467)
T COG2211 327 VVLIVVALIIAGVGTGIANPLPWAMVADTVD 357 (467)
T ss_pred hHHHHHHHHHHHHHhhccccccHHHhcchhh
Confidence 5555556677788888888999999988764
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.75 E-value=1.3e-19 Score=176.70 Aligned_cols=288 Identities=16% Similarity=0.159 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
.+++..++...........+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++++++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33444444566666777889999999999999999999999999999999999999998888899999999999998876
Q ss_pred ccc-----------c-------------------------------------ccHHHHHHHHHHHhhhhhchhhHHHHHH
Q 012519 183 WAA-----------D-------------------------------------TSLLALLAMRAVVGLAEGVALPAMNNMV 214 (461)
Q Consensus 183 ~~~-----------~-------------------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i 214 (461)
+-+ . .-++.++++.++.|+|....++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 420 0 0145688899999999999999999999
Q ss_pred HhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------C-chhHHHHHHHHHHHHHHHH
Q 012519 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---------------------G-IFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---------------------g-wr~~f~~~~~~~~~~~~~~ 272 (461)
-|..++++-+..+|+..+...+|.++|-++++.+.+.+ | |-.-|++.+.+.++..+..
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998775421 2 6666777777777777777
Q ss_pred HHhcCCCCCCCCCcchhHHHHHHHh--hcCccccC-----CCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHH
Q 012519 273 LSATSSTPDRHPQISKYELEYILRE--KQKPLLMG-----NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILS 345 (461)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (461)
+.+.++-|+..+..+..+.++..+. ..+..... .....+.....++++++||.+....+......+...++.+
T Consensus 247 ~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t 326 (539)
T PF03137_consen 247 FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT 326 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 7776555554211111111100000 00000000 0122344556778999999999999999999999999999
Q ss_pred hHHHHHHHhhCCCccccchhhhhhHH-HHHHHHHHHHHhhhhHhhc
Q 012519 346 WMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 346 ~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~ 390 (461)
++|.|++..++.++.+++++.....+ ++++|.+++|++.+|++-+
T Consensus 327 F~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 327 FLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ----------------------------------------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 99999999999999999998877666 5578889999999998755
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.73 E-value=2.4e-15 Score=139.53 Aligned_cols=347 Identities=14% Similarity=0.132 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHhhh-HhhhhhhhhhcC----CCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHH
Q 012519 104 LALALALCNADRVVM-SVAIVPLSLAHG----WSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~----~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~ 177 (461)
+....+..-+..+-+ .+..-++..+++ ++++++.-+.+.|..-.-+...++|+++|| +|+|++++.|.++..+|
T Consensus 26 if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iG 105 (498)
T COG3104 26 IFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIG 105 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 334444444433333 333444555555 999999999999988888999999999999 59999999999999999
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
.++.+.........++++-++.++|.|..-+...++++|.+|++ +|-..++++..+.++|..++|++.+++.+++||.
T Consensus 106 h~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~ 185 (498)
T COG3104 106 HLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWH 185 (498)
T ss_pred HHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHH
Confidence 99988871126888999999999999999999999999999865 4788899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCC-----CCCCcchhHHHHH---------HH----hh-cCc---------------
Q 012519 256 GPFVIFGLSGFLWVLVWLSATSSTPD-----RHPQISKYELEYI---------LR----EK-QKP--------------- 301 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---------~~----~~-~~~--------------- 301 (461)
..|...++-..+.++..+...+.-.. +.......+.... .. .. .+.
T Consensus 186 ~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~ 265 (498)
T COG3104 186 VGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAII 265 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887776666555422111 0000000000000 00 00 000
Q ss_pred cccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCC----ccccchhhhhhHHHHHHHH
Q 012519 302 LLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHID----LRQASWFSAVPWSVMAFTG 377 (461)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s----~~~~~~~~~~~~~~~~i~~ 377 (461)
...+..+.++.. ..-++++ ....+.+...+++..+....+.+..|..+..+.+ ....+++.+...+.-++..
T Consensus 266 ~~~~~~~~~~~~-~er~r~~---~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~ 341 (498)
T COG3104 266 YFAEAFRSPKVF-DERRRLL---AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFS 341 (498)
T ss_pred HHHHHhccCccH-HHHHHHH---HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHH
Confidence 000000001000 1111111 1222233333333333333444445544432222 1345677788888888888
Q ss_pred HHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHh---cc-----ChhHHHHHHHHHHHHHHhhhhhchhHhhhh
Q 012519 378 YLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AA-----KSPVMASAWLTLAIGMKSFSHSGFLVNLQE 449 (461)
Q Consensus 378 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (461)
++..++..|.++++.......|.-+...+..++...+... .. .+.++.+...++..+..-+..+.-..++..
T Consensus 342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~ 421 (498)
T COG3104 342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK 421 (498)
T ss_pred HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 8888998887776554444444443333333333333222 11 134455555556666666777777788888
Q ss_pred hcccc
Q 012519 450 IAPQY 454 (461)
Q Consensus 450 ~~p~~ 454 (461)
+.|+.
T Consensus 422 laP~~ 426 (498)
T COG3104 422 LAPPA 426 (498)
T ss_pred hChHH
Confidence 87753
No 117
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.72 E-value=1.1e-14 Score=130.56 Aligned_cols=245 Identities=15% Similarity=0.093 Sum_probs=176.0
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
..+|..-.+.+++|.+..|++.+........++..++.|.++||+|||+.-++-+++.+++++.- .. ++++.++++|
T Consensus 52 LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~--~~~~~L~~GR 128 (354)
T PF05631_consen 52 LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HS--SNYPVLLLGR 128 (354)
T ss_pred hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hc--cccHHHHHHH
Confidence 44444445567899999999999999999999999999999999999999999999999998753 44 8999999999
Q ss_pred HHHhhhhhchhhHHHHHH-Hhh----cCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCc--hhHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMV-ARW----FPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLW 268 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~ 268 (461)
++.|++......+--++. .|. +|++..+..++... ...++-.+++.+++..+.+..+. ..+|.....+.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 999999999988888775 443 23333444444443 23344456666667777776654 78898888888777
Q ss_pred HHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHH
Q 012519 269 VLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (461)
.+++...-+|+..+..+..+ ..+.....++.++++|+++.+.++..+.-...+.+....+
T Consensus 209 ~~~I~~~W~ENyg~~~~~~~--------------------~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWt 268 (354)
T PF05631_consen 209 AVLILKTWPENYGDTSSSSS--------------------LSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWT 268 (354)
T ss_pred HHHHHhcccccCCCcccccc--------------------hHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeee
Confidence 77666555555433211100 0111123456778899999999999998888887764444
Q ss_pred HHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhh
Q 012519 349 IYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (461)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr 386 (461)
.-++. +-....-|++++.+.++.++|+.+..++..+
T Consensus 269 PaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 269 PALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred ceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44442 2233457899999999999999888765543
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.71 E-value=6.1e-16 Score=148.76 Aligned_cols=161 Identities=14% Similarity=0.078 Sum_probs=135.2
Q ss_pred hhhhhhhhhcCCC--------chhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc--ccH
Q 012519 120 VAIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD--TSL 189 (461)
Q Consensus 120 ~~~~~i~~~~~~s--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~~~ 189 (461)
...+...++.+.+ ....+.+.++..++..++.++.|+++||+|+|+++.++.++.+++..+...... .++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 3345555555544 366799999999999999999999999999999999999999888776665310 134
Q ss_pred HHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhh------cCchhHHHHHH
Q 012519 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQ------AGIFGPFVIFG 262 (461)
Q Consensus 190 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~gwr~~f~~~~ 262 (461)
+.+++.+++.|++.+...+....++.|++|+++|++++++.+ ....+|..+||+++|.+.++ +||+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 677888999999999888999999999999999999999997 67889999999999999987 46999999999
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 012519 263 LSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~ 280 (461)
++.++..++.+++.+|+.
T Consensus 389 ~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHhCCcc
Confidence 998888888888877653
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.70 E-value=1.9e-16 Score=128.03 Aligned_cols=137 Identities=21% Similarity=0.366 Sum_probs=125.0
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcC
Q 012519 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (461)
Q Consensus 140 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 219 (461)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+. ++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 455678889999999999999999999999999999999988888 899999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCC
Q 012519 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 278 (461)
+++|+++.++......+|..+++.+++.+.+..+|++.|++.+.+.++..+..++..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999888887777766666543
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.69 E-value=2.8e-14 Score=130.01 Aligned_cols=307 Identities=15% Similarity=0.110 Sum_probs=210.1
Q ss_pred hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc-----chH-HHHHHHHHHHHHHHHhhcc----cc-------c
Q 012519 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKI-IMAWGVALWSLATFLTPWA----AD-------T 187 (461)
Q Consensus 125 i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~-~~~~~~~~~~i~~~~~~~~----~~-------~ 187 (461)
+..|++++..-.+.+.++..+... ..+.+|..+|+.+ ||. .+..|.+....+..+..++ .. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998888775 5889999999988 775 4455666666655544333 11 1
Q ss_pred c-HH--HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHH---H
Q 012519 188 S-LL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI---F 261 (461)
Q Consensus 188 ~-~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~---~ 261 (461)
. .+ ...+...+.|+|.+.......++++|..|+++|+++.++...+.-+|.+++..+.+.+.+.+.-.-..-+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 2 22 2344567889999999999999999999999999999999999999999999999999887663222222 2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+++.++..++..+- .|++..+.. ...++++......++++..+|+...+.+..++...+++
T Consensus 165 a~i~~~l~~ia~wg-~E~r~~~~~------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~ 225 (403)
T PF03209_consen 165 ALIALLLNLIALWG-QEPRRSRRA------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF 225 (403)
T ss_pred HHHHHHHHHHHHHh-cccCCcccc------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 22332222222222 222221111 01222333344567788889998888888888888888
Q ss_pred HHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhh-HhhcCcchhhhHHHHHHHhhHHHHHHHH---HHh
Q 012519 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGIALI---GLT 417 (461)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 417 (461)
.-...+-.|--+++|+++.+...+......+.+++-.+.|++..| .+++ + ....++.....++. ...
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~--~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------R--TAALGCLLGALAFALIILAG 296 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------H--HHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999987764 3333 1 22223232222222 233
Q ss_pred ccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhc-ccccccccC
Q 012519 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHG 460 (461)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g 460 (461)
...+.+......++.+...|.+.........+.. +++.|..+|
T Consensus 297 ~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 297 PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHH
Confidence 3445555666666666667777666666666666 466776655
No 121
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.67 E-value=2.6e-14 Score=129.76 Aligned_cols=305 Identities=14% Similarity=0.089 Sum_probs=213.8
Q ss_pred CchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchH-HHHHHHHHHHHHHHHhhcccc-ccHHHHHHHHHHHhhhhhchhhH
Q 012519 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAAD-TSLLALLAMRAVVGLAEGVALPA 209 (461)
Q Consensus 132 s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~ 209 (461)
+.+..+...++..+..++.+|+.|.++|+.|+|| .+-....+..++.++..+++. ++++..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3456788889999999999999999999999665 555566666666777777743 34556666788889999999999
Q ss_pred HHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH---H---------------hhcCchhHHHHHHHHHHHHHHH
Q 012519 210 MNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL---M---------------SQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~---------------~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
..+++.+..++++-++..++-.....+|..+.-++.-.. . +...-|..+.+.++.-++..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999988888887777776777766554443111 1 2224688899999988888888
Q ss_pred HHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 012519 272 WLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF 351 (461)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (461)
.++..++.++...... . ...+. -++....++++.+++++..++++.+++.=+..++......|.
T Consensus 216 m~~~v~~~~~~~~~~~-~---~l~~g------------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg 279 (438)
T COG2270 216 MILNVHDAEKISSPPP-T---ALRNG------------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG 279 (438)
T ss_pred HHhcccccccccccch-H---HHHHH------------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8888777664321100 0 00000 011234677888889999999999999999999999999999
Q ss_pred HHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHH
Q 012519 352 NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTL 431 (461)
Q Consensus 352 ~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (461)
...+|++..+...+.....+.+++|+++.|++.||++.|+ ++..+++...+..+...+.......+.+.++
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~---------vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll 350 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP---------VLMIGLVILSIAALYLIFLEGELDFWILGLL 350 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce---------eehHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 9889999999999999999999999999999999999882 2222322222222222223333333333344
Q ss_pred HHHHHhhhhhchhHhhhhhcc-cccccccCC
Q 012519 432 AIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI 461 (461)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl 461 (461)
.+...|-.....-++..+..| ++.++.+|+
T Consensus 351 ~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 351 VGTSLGGAQASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HHHhcchHHHHHHHHHHHhCCCccccceeeh
Confidence 444444445555666677776 456666653
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.67 E-value=1.3e-14 Score=139.46 Aligned_cols=157 Identities=18% Similarity=0.173 Sum_probs=133.7
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHh
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (461)
..+.+.++.+. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..++.|
T Consensus 238 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G 313 (399)
T PRK05122 238 FITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA--PSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 34444455555 345677788899999999999999999999999999999888888888887 88888888999999
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
++.+...+.....+.|.+|+++|+++.++++....+|..+++++.+.+.++.||++.|++.+++.++..+..++..++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99998888888888999999999999999999999999999999999999999999999988888877766666655444
Q ss_pred C
Q 012519 281 D 281 (461)
Q Consensus 281 ~ 281 (461)
+
T Consensus 394 ~ 394 (399)
T PRK05122 394 R 394 (399)
T ss_pred c
Confidence 3
No 123
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=1.1e-14 Score=138.64 Aligned_cols=339 Identities=18% Similarity=0.154 Sum_probs=225.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCc-hhHHHHHHH----HHHHHHHhHhhhhhhhhhhcchHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSR-SFSGIVQSS----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~~~~~s~----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 173 (461)
.......+-.+..++.........+...+.++.+. ...+..... ..+...+.++..|.++||+|||..+.+.+..
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 34444555555555555455555566555554322 222333333 3678888999999999999999999999999
Q ss_pred HHHHHHHhhccccccHHHHHHHHHHHhhhh--hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012519 174 WSLATFLTPWAADTSLLALLAMRAVVGLAE--GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~--g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 251 (461)
..+..+...+. . +|.++ +.|+.. +.....+.++++|....++|....|+.+.....+..++|.+++.+...
T Consensus 102 ~~l~~~~~~~~--~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 102 TILPALCLLFQ--G-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHhHHHHHHH--H-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 99998888776 4 44444 444432 356778899999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHH
Q 012519 252 AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIV 331 (461)
Q Consensus 252 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (461)
.|.-..|.+..+..++..+..++..||+..+......+..+ .... .....+........+..-.+|..+.+++
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE----LTPG---SLDSSHVADAFQSLTKVGPDRLLLLLLL 247 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc----cCCC---cccchhhhhhhhhhcccCCCccchHHHH
Confidence 99999999999999999998888888876544332100000 0000 0000001111111112223455555555
Q ss_pred HHHHHHHHHHHHHH-hHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHH-HhhhhHhhcCcchhhhHHHHHHHhhHHH
Q 012519 332 ANAMHSWGFFVILS-WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG-LLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (461)
Q Consensus 332 ~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (461)
..++.......-.. ..+.|+...++++..+.+.+.+.......++.++.. .+...++.+ .++..++..-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~---------~~i~lGl~~~ 318 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK---------RLISLGLLSE 318 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hHhhHHHHHH
Confidence 55554444433222 457788888999999999999999999999997776 677777776 3666777777
Q ss_pred HHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhc-ccccccccCC
Q 012519 410 GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGI 461 (461)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gl 461 (461)
.+..+...+....|..+....+.. +.....+..-+...... ++++|.+.++
T Consensus 319 ~~~~~~~af~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 319 FLQLLLFAFATETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred HHHHHHHHHhccchhhhHHHHHHH-hhcchhHHHHhHHHhhcccccccchhhH
Confidence 777777777776665554443333 33344444455555444 5778887763
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.66 E-value=3.2e-15 Score=142.34 Aligned_cols=149 Identities=15% Similarity=0.077 Sum_probs=128.8
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~ 199 (461)
...+.+.++++.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++..++.++..+.+..+...+++..++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34455667889999999999999999999999999999999999999999999998888877776212333455667888
Q ss_pred hhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 012519 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (461)
Q Consensus 200 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 268 (461)
|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|++.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 988888888888899999999999999999999999999999999999999999999999988776654
No 125
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.66 E-value=1.7e-14 Score=135.40 Aligned_cols=256 Identities=14% Similarity=0.150 Sum_probs=184.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhh--cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcc-hHHHHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVA 172 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~ 172 (461)
.+|+.+.++.+..++.......+.+..-++.++ .+.+.+..|++.++..++.+++++++|+...|.+. |+.++.+.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 356777788888888888777777766555555 77788999999999999999999999999999986 888999999
Q ss_pred HHHHHHHHh-hcc--ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 173 LWSLATFLT-PWA--ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (461)
Q Consensus 173 ~~~i~~~~~-~~~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 249 (461)
+..++.++. ++. +....+.++++|++.|+|.| .....-+|+++....++|.++++....+..+|.++||.++..+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999987 433 22368899999999999977 56778999999888899999999999999999999999888775
Q ss_pred hh--cC-----------chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChh
Q 012519 250 SQ--AG-----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP 316 (461)
Q Consensus 250 ~~--~g-----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (461)
.- .| +..+-|+.+++.++..+...++.+|.+++......++.++ .+ .+.++.+..+.+
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~d 260 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE----EK-----SDIEKVKKPKLD 260 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh----hc-----cchhhhccCChh
Confidence 41 12 2346678888888877777777777665442221111100 00 000001111111
Q ss_pred HHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhh
Q 012519 317 FRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA 367 (461)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 367 (461)
+ +..+.+.+..+...+.+....+..+.+....++++..++....+
T Consensus 261 ~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g 305 (488)
T KOG2325|consen 261 W------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG 305 (488)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence 1 22445666666667777777777777777778887766544443
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.66 E-value=2.2e-15 Score=145.66 Aligned_cols=152 Identities=13% Similarity=0.091 Sum_probs=133.4
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhch
Q 012519 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (461)
Q Consensus 127 ~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 206 (461)
.+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++ ++.+.+++.+++.|++.+..
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~ 332 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFL 332 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence 3346677889999999999999999999999999999999999999999998888888 89999999999999998888
Q ss_pred hhHHHHHHHhhcCchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 207 LPAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
.+....++.|.+|++.|+...+. ++....+|..+++.+.|++.+..||+..|.+.+++.++..++.++..++++
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88888999999999988887665 677888999999999999999999999999988888777666666655544
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=3.3e-14 Score=139.97 Aligned_cols=163 Identities=13% Similarity=0.123 Sum_probs=124.5
Q ss_pred hhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH---hhccccccHHHH
Q 012519 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL---TPWAADTSLLAL 192 (461)
Q Consensus 117 ~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~~~~l 192 (461)
.....+|.+. +++|.+..+.++..+...++..++.++.|+++||+|||++++++.++..++.+. ...+ ++...+
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 345 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS--NVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHH
Confidence 3444556544 567888888888888899999999999999999999999988887654433322 2223 567888
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~ 271 (461)
++++++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+..+ |+.++++..+++++.++.
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 8899999988877777888889999999999999998555556667889999998887654 787777766666665555
Q ss_pred HHHhcCCCCCC
Q 012519 272 WLSATSSTPDR 282 (461)
Q Consensus 272 ~~~~~~~~~~~ 282 (461)
.+ +.||+|+.
T Consensus 426 ~~-~~pes~~~ 435 (490)
T PRK10642 426 GV-TMKETANR 435 (490)
T ss_pred HH-HhccccCC
Confidence 44 44787764
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.64 E-value=1.9e-14 Score=138.58 Aligned_cols=157 Identities=19% Similarity=0.133 Sum_probs=132.3
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
......|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.+...++.++..+. ++.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA--PSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHH
Confidence 33445677778889999999999999999999999999999999999999988877777777777777 7888888888
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHh
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 275 (461)
++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+||.+++.+.++.+ |...++..+...++..++.++.
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 899998888888999999999999999999999999999999999999999988754 5666666665555555555544
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.64 E-value=2.2e-14 Score=144.51 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHh
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 216 (461)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.++. ++.+.+++++++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567778999999999999999999999999999999999999888 888888888999999888889999999999
Q ss_pred hcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
++|.++|++++|+..+...+|.++||++++.+.+. +...+|++.+++.++.+++.+++ ||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 99999999999999999999999999999988764 45677888777777766655544 6543
No 130
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.64 E-value=3.9e-14 Score=135.07 Aligned_cols=154 Identities=12% Similarity=0.018 Sum_probs=136.4
Q ss_pred HhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHH
Q 012519 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (461)
Q Consensus 115 ~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 194 (461)
...+....|.+.+++|.+..++|++.+...++..++.++.+++.||+|+|+.+.++.++..+..++.+++ ++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI--EAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH--hhHHHHHH
Confidence 3344445566667899999999999999999999999999999999999999999999999999999988 99999999
Q ss_pred HHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 012519 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 195 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (461)
.+++.|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|++.++++++..++.
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999986 57889999999999999999996 67888887777654443
No 131
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=2.9e-14 Score=136.47 Aligned_cols=153 Identities=11% Similarity=0.014 Sum_probs=128.0
Q ss_pred hhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHH
Q 012519 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (461)
Q Consensus 120 ~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 198 (461)
...|. +.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......+. ++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA--HSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHH
Confidence 34554 456789999999999888888888899999999999999998888777666655555556 788888889999
Q ss_pred HhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 199 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
.+++.|...+....+..|..| ++|++++++++....+|..+|+.+++.+.++.||+..|++.+++.++..+..++.
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 998888777788888899997 5699999999999999999999999999999999999998888777766655544
No 132
>PRK12382 putative transporter; Provisional
Probab=99.62 E-value=5.2e-14 Score=134.87 Aligned_cols=153 Identities=18% Similarity=0.216 Sum_probs=131.9
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~ 199 (461)
...+.+.++.+.+ +.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.++++.++.
T Consensus 237 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 312 (392)
T PRK12382 237 TFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA--PTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHH
Confidence 3344444555654 35666777888889999999999999999999999999999988888887 8888888899999
Q ss_pred hhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhc
Q 012519 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 200 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
|++.+...+...+.+.|.+|+++||++.++.+....+|..+||.+.+.+.++.||++.|++.+++.++..+..++..
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999888888889999999999999999999999999999999999999999999999999988887776666543
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=6.4e-14 Score=135.37 Aligned_cols=162 Identities=14% Similarity=0.063 Sum_probs=140.3
Q ss_pred hHhhhhhhhhh-cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 118 MSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 118 ~~~~~~~i~~~-~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
.....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+. ++.+.++++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--PMWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--chHHHHHHHH
Confidence 33455666666 89999999999999999999999999999999888888888888888888888887 8888888889
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhc
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
++.|++.+...+...+++.|..|+++||++++++.....+|..+|+.+.|.+.+..|++..+++.+.+.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988877888899999999999999999999999999999999999999999999999988887777666666665
Q ss_pred CCCCC
Q 012519 277 SSTPD 281 (461)
Q Consensus 277 ~~~~~ 281 (461)
++.++
T Consensus 400 ~~~~~ 404 (417)
T PRK10489 400 GELRR 404 (417)
T ss_pred ccccc
Confidence 55443
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.61 E-value=2.6e-14 Score=137.77 Aligned_cols=158 Identities=17% Similarity=0.152 Sum_probs=132.4
Q ss_pred hHhhhhhhhhhcCCCch----hHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHH
Q 012519 118 MSVAIVPLSLAHGWSRS----FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALL 193 (461)
Q Consensus 118 ~~~~~~~i~~~~~~s~~----~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 193 (461)
..+..+.+..+.+.+.. ..+.+.++..++..++.++.|++.||+|||+.+..+..+..++.+...+. ++.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 315 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHHH
Confidence 33444544444332322 34666677788888999999999999999999999998888888877777 8888899
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (461)
+.+++.|++.+...+...+++.+..|+++||+.+++......+|..+||.+++.+.++.||++.|++.+++.++..++.+
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888777666
Q ss_pred HhcC
Q 012519 274 SATS 277 (461)
Q Consensus 274 ~~~~ 277 (461)
+..+
T Consensus 396 ~~~~ 399 (408)
T PRK09874 396 NSLR 399 (408)
T ss_pred HHHH
Confidence 5443
No 135
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.61 E-value=5.7e-14 Score=132.31 Aligned_cols=163 Identities=25% Similarity=0.327 Sum_probs=145.4
Q ss_pred HHHHHHHhhhHhhhhhhhhhc-CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchH-HHHHHHHHHHHHHHHhhcccc
Q 012519 109 ALCNADRVVMSVAIVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAAD 186 (461)
Q Consensus 109 ~~~~~~~~~~~~~~~~i~~~~-~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~~ 186 (461)
+.............|.+.++. |.+..+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.++....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 262 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-- 262 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--
Confidence 333344444555566666654 899999999999999999999999999999999999 9999999999999999888
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 266 (461)
++.+.+++..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..|++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHH
Q 012519 267 LWVLVWL 273 (461)
Q Consensus 267 ~~~~~~~ 273 (461)
+..+..+
T Consensus 343 i~~i~~~ 349 (352)
T cd06174 343 LAALLLL 349 (352)
T ss_pred HHHHHhe
Confidence 7766544
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.59 E-value=1.3e-13 Score=131.21 Aligned_cols=148 Identities=13% Similarity=0.048 Sum_probs=127.4
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~ 203 (461)
.+.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+. ++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD--NSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 3457789999999999888888888889999999999999999988887776666666666 78888888999999999
Q ss_pred hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
+...+....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..+
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 98888888999999874 66799999999999999999999999999999999999988887776665543
No 137
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.59 E-value=9.6e-14 Score=135.97 Aligned_cols=171 Identities=18% Similarity=0.083 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH-
Q 012519 103 MLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL- 180 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~- 180 (461)
.+++..++............|. +.+++|.+..+.++..+...++..++.+++|+++||+|||+.++....+..++..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 3444444444444445555664 55679999999999999999999999999999999999998776655444443322
Q ss_pred -hhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHh--------
Q 012519 181 -TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMS-------- 250 (461)
Q Consensus 181 -~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~-------- 250 (461)
.... ++.+.+.+.+++.|++.............|.+|+++||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 342 ~~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 342 VYQHA--TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHhc--CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 2233 56777778888888654444444446777999999999999999988886 77999999999999
Q ss_pred ----hcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 251 ----QAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 251 ----~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
..||+..|++.++..++..+..++.
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877777765555443
No 138
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.59 E-value=1.1e-11 Score=114.61 Aligned_cols=330 Identities=13% Similarity=0.078 Sum_probs=220.5
Q ss_pred hhhhhhhhh-cCCCchhHH-HHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH
Q 012519 120 VAIVPLSLA-HGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (461)
Q Consensus 120 ~~~~~i~~~-~~~s~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (461)
...|.+.+. .|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+.-+. ++.+.+-+..+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHHH
Confidence 334555554 788888764 55566677778888999999999999999999999999999999999 99999999999
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHHHh
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
+.|++.+. ..+.++++-...|+++-.++.+...++.-+|..++.++|..+...- +.+...++......+..+..+ +
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~-f 180 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIAL-F 180 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-H
Confidence 99999884 7788899998999999999999999999999999999999887743 345454554443334344434 3
Q ss_pred cCCCCCCC---CCcch-h-----HHHHHHHhhcCc--cccCCCCCCC-------CCChhHHHHhcchhhHHHHHHHHHHH
Q 012519 276 TSSTPDRH---PQISK-Y-----ELEYILREKQKP--LLMGNKHKPA-------TVIPPFRRLLSKMPTWSIIVANAMHS 337 (461)
Q Consensus 276 ~~~~~~~~---~~~~~-~-----~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (461)
+|..++.. +.... . +.+...+..... .......... ..+.++++..++|.++...+-+.+..
T Consensus 181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 45444321 11100 0 000000000000 0000000000 12345567778899998888888888
Q ss_pred HHHHHHHHhHHHHHHHh--hCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHH
Q 012519 338 WGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (461)
.+++.+.+|......+. -+-+..-.|.+-+...+.+.++.+..|++..++.+. ....+....++.+..+++
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFL 333 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHH
Confidence 88888888887777764 123334567777888888888888888885555544 234444445556666667
Q ss_pred HhccChhHHHHHHHHHHHHHHhhhhhchhHhhh-hhcccccccccC
Q 012519 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHG 460 (461)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g~~~g 460 (461)
....++.+...+..++....+.+.......-++ .+..+.-|.+.|
T Consensus 334 m~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFG 379 (412)
T PF01770_consen 334 MSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFG 379 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee
Confidence 777778887777777666666665544333333 333345665555
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.58 E-value=4.4e-13 Score=127.83 Aligned_cols=151 Identities=15% Similarity=0.169 Sum_probs=126.2
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~ 199 (461)
..+|.+.++.|.+..+.+++.+.+.++..+++++.|++.||+|+|+++..+..+..++.+... +. +..+...++.
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~----~~-~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML----SQ-AAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh----hh-HHHHHHHHHH
Confidence 346667777899999999999999999999999999999999999999988888877665442 22 2334566778
Q ss_pred hhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 200 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
|++.+...|...+++.|..|+++++.+.+......++|..+||.++|.+.++.||++.|.+.+.+.++..+..++.
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 8877778899999999999988888888998899999999999999999999999999999888887665555543
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.57 E-value=4.4e-13 Score=128.28 Aligned_cols=153 Identities=17% Similarity=0.099 Sum_probs=126.9
Q ss_pred hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH-HhhccccccHHHHHHHHHHHh
Q 012519 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 122 ~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r~l~G 200 (461)
.+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.. .+..+..++.. +.... ++.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--NSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--chHHHHHHHHHHHH
Confidence 3445666899999999999999999999999999999999988754 44444444433 33455 77888888999999
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCC
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 278 (461)
++.+...+...+.+.+..| ++|+++++++.....+|..+||+++|.+.+++|++..|++.+++.++.++..+...++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 9988777777888888876 6889999999999999999999999999999999999999999888877777766543
No 141
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.57 E-value=2.3e-13 Score=130.37 Aligned_cols=166 Identities=17% Similarity=0.110 Sum_probs=121.7
Q ss_pred HHHHHHHHHHhhhHhhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchH--HH------HHHHHHHHH
Q 012519 106 LALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI--IM------AWGVALWSL 176 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~~------~~~~~~~~i 176 (461)
+..++............|.+ .++++.+..+.+++.+...++..++.++.|+++||+|||+ .. ..+.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSL 301 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Confidence 33333344444455555544 4568999999999999999999999999999999999996 11 111111222
Q ss_pred HHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-ch
Q 012519 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr 255 (461)
........ ++.+..+...++.+++.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+
T Consensus 302 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~ 378 (399)
T TIGR00893 302 LMFATNYV--NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFA 378 (399)
T ss_pred HHHHhccc--hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchh
Confidence 22222222 455555555555555555 789999999999999999999999999999999999999999999988 99
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012519 256 GPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~ 274 (461)
..|++.+++.++..+..+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 379 GALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988887776655443
No 142
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.57 E-value=7.1e-14 Score=138.32 Aligned_cols=152 Identities=13% Similarity=0.108 Sum_probs=120.6
Q ss_pred hHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 118 ~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
....+|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++.++.++..++.++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 345566666 5899999999999999999999999999999999999999998887777665544433224445555555
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 269 (461)
++.++......+...+++.|.+|+++|++++++......+|..+||.+++.+.+++||+..+.+.+....+..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVV 446 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHH
Confidence 5555444445567778899999999999999999999999999999999999999999988877665444433
No 143
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.55 E-value=1.4e-13 Score=134.04 Aligned_cols=153 Identities=14% Similarity=0.061 Sum_probs=126.8
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh--cchHHHHH--HHHHHHHHHHHhhccccccHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIMAW--GVALWSLATFLTPWAADTSLLAL 192 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~~~~i~~~~~~~~~~~~~~~l 192 (461)
.....++.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++.... ++++.+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--~~~~~~ 336 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA--GDYTGL 336 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh--chHHHH
Confidence 344455666678899999999999999999999999999999983 34443333 344444555566667 889999
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~ 271 (461)
++.+++.|++.+...+...+++.|.+|++++++++++++....+|..+||.+++.+.+.. +|++.|++.+++.++..+.
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999887 4999999988877665543
No 144
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.55 E-value=1.4e-13 Score=131.95 Aligned_cols=159 Identities=13% Similarity=0.120 Sum_probs=123.1
Q ss_pred HHHHHHHHhhhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHH--HHhhcc
Q 012519 108 LALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT--FLTPWA 184 (461)
Q Consensus 108 ~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~--~~~~~~ 184 (461)
.+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333344445556555 6789999999999999999999999999999999999998776555444332 222222
Q ss_pred ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHH
Q 012519 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFG 262 (461)
Q Consensus 185 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~ 262 (461)
..++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.++.| |++.++..+
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 1256777788889999999889999999999999999999999984 56677899999999999999988 988877766
Q ss_pred HHHH
Q 012519 263 LSGF 266 (461)
Q Consensus 263 ~~~~ 266 (461)
...+
T Consensus 388 ~~~l 391 (394)
T TIGR00883 388 ALAL 391 (394)
T ss_pred HHHH
Confidence 5544
No 145
>PRK03699 putative transporter; Provisional
Probab=99.55 E-value=2.7e-13 Score=129.85 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=130.9
Q ss_pred hhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Q 012519 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (461)
Q Consensus 117 ~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (461)
.+....|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|+|+.+.....+..+...+.... ++.+.+.+.
T Consensus 223 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (394)
T PRK03699 223 TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT--DDPSHLLYA 300 (394)
T ss_pred HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc--CCchHHHHH
Confidence 4444566555 6789999999999999999999999999999999999999998888777777776666 777777778
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
.++.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+..+..
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 889999888888888888888775 5567888999999999999999999999999999999998888777765544443
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.54 E-value=9.1e-13 Score=126.06 Aligned_cols=163 Identities=15% Similarity=0.106 Sum_probs=129.7
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
......|.+.+++|.+..+.++..+.+.++..++.++.|++.||+|||+.+.++..+..++.++....+ ++...+. -
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~ 299 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-LQLPVLW--A 299 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-chHHHHH--H
Confidence 444455666667899999999999999999999999999999999999999998888877776554431 3322222 2
Q ss_pred HHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 274 (461)
++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.++.| |...|++.++.+++..+..+.
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 46688888888887777777774 6789999999999999999999999999999886 888888888777777666666
Q ss_pred hcCCCCCC
Q 012519 275 ATSSTPDR 282 (461)
Q Consensus 275 ~~~~~~~~ 282 (461)
+.||++++
T Consensus 380 ~~~~~~~~ 387 (393)
T PRK09705 380 FAPARFPQ 387 (393)
T ss_pred hccccccc
Confidence 66665543
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.54 E-value=9.3e-13 Score=126.48 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=126.1
Q ss_pred HHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHH-HHHHHHHHHHHHhhcc---
Q 012519 109 ALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA-WGVALWSLATFLTPWA--- 184 (461)
Q Consensus 109 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~--- 184 (461)
++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+.
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~ 311 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH 311 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333333344455667777889999999999999999999999999999999999988764 3333333333332211
Q ss_pred ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 012519 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 185 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
..++.+.+++..++.|++.+...+ ....+.|.. +++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++
T Consensus 312 ~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 312 FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 115677778888999998886654 455667765 468999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh
Q 012519 265 GFLWVLVWLSA 275 (461)
Q Consensus 265 ~~~~~~~~~~~ 275 (461)
.++..++..+.
T Consensus 390 ~~i~~~~~~~~ 400 (402)
T TIGR00897 390 YVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHh
Confidence 87766665554
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.53 E-value=3.2e-13 Score=132.95 Aligned_cols=181 Identities=17% Similarity=0.108 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33333444443333334445566778888999998899999999999999999999999999999999999888888777
Q ss_pred Hhhc---cccc------cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 180 LTPW---AADT------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 180 ~~~~---~~~~------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
+.++ ...+ +...+....++.+.......+....++.|.+|+++|++++++......+|.+++|.+.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 365 VLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6652 1112 333333333333332233446667788999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
+.+|++.|++.++++++..+..+++.||.+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccCC
Confidence 999999999999888887777776666543
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.53 E-value=1.4e-12 Score=126.53 Aligned_cols=160 Identities=14% Similarity=0.023 Sum_probs=114.4
Q ss_pred hhhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh--cch-HHHHH---HHHHHHHHHHHhhcccccc
Q 012519 116 VVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGK-IIMAW---GVALWSLATFLTPWAADTS 188 (461)
Q Consensus 116 ~~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr-~~~~~---~~~~~~i~~~~~~~~~~~~ 188 (461)
......+|.+. +++|.+..+.++..+.+.++..++.++.|+++||+ ++| ..... +..+..++..... . .+
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~--~~ 336 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-F--AS 336 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-c--cc
Confidence 34444555554 67899999999999999999999999999999999 333 32222 2222222222222 2 34
Q ss_pred HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 012519 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (461)
Q Consensus 189 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 268 (461)
...+.+..+..|++..........++.|.+|+++|++++|+.+....+|..++|.+.+++.++.||+..|++.++++++.
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~ 416 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGIS 416 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHH
Confidence 44444444555554332333345567899999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHhcCC
Q 012519 269 VLVWLSATSS 278 (461)
Q Consensus 269 ~~~~~~~~~~ 278 (461)
.+..++..++
T Consensus 417 ~~~~~~~~~~ 426 (434)
T PRK11663 417 ALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHhh
Confidence 7766665443
No 150
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.53 E-value=8.9e-13 Score=128.60 Aligned_cols=160 Identities=11% Similarity=0.004 Sum_probs=113.4
Q ss_pred hhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh--cchHHH-HHHHHHHHHHHHHhhccccccHHHH
Q 012519 117 VMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWAADTSLLAL 192 (461)
Q Consensus 117 ~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~i~~~~~~~~~~~~~~~l 192 (461)
.....+|.+.+ ++|.+..+.++....+.++..++.++.|+++||+ |||+.. +....+..++.++..+....+.+.+
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 44455666554 5789999999999999999999999999999999 555432 2223333333333222211455555
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
+++.++.|.+..........+..|.+|+++||++.|+.+....+|.. ++|.+.+.+.+++||+..|++.++.+++.++.
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 55556666544333334455678999999999999999988888765 47999999999999999999988877776665
Q ss_pred HHHhc
Q 012519 272 WLSAT 276 (461)
Q Consensus 272 ~~~~~ 276 (461)
...+.
T Consensus 431 ~~~~~ 435 (452)
T PRK11273 431 LIVVM 435 (452)
T ss_pred HHHHh
Confidence 55443
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.52 E-value=1.9e-12 Score=123.52 Aligned_cols=146 Identities=19% Similarity=0.085 Sum_probs=125.4
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHh
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (461)
..|.+.++.|.+..+.|++.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.++. ++.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST--TALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHH
Confidence 3344556789999999999999999999999999999999999999999999999988888888 89999999999999
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
++.+...+....++.+. ++++++++.++.+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++.++
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 99998899999998887 5677889999886 56678889999999999999987 467766666654433
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.49 E-value=5.5e-13 Score=128.38 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=115.7
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH-HhhccccccHHHHHHHHHHHhhh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVVGLA 202 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r~l~G~~ 202 (461)
.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +.... ++.+.+.+..++.|++
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 341 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG--ANVAVLGLGLFFQQML 341 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999888776643332 33344 6777777777888887
Q ss_pred hhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHH
Q 012519 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIF 261 (461)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~ 261 (461)
.+...+....++.|.+|+++|++++|+.+....+|..++|++++.+.++.| |+..+...
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 342 VQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 777788888999999999999999999999999999999999999999998 88766653
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.49 E-value=1.7e-12 Score=125.89 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=108.5
Q ss_pred hHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH
Q 012519 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (461)
Q Consensus 118 ~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (461)
+...+|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..++......++...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777777899999999999999999999999999999999999999988887776665544331123332222222
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHH
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 260 (461)
..+++.....+..+.++.|.+|+++||+++|+......+|..++|.+.+++.++.|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 223332334456677889999999999999999999999999999999999998886654333
No 154
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.49 E-value=3.5e-11 Score=118.20 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=123.6
Q ss_pred hhhhhhhhcCCCchhHHHHHH-HHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh---hccccccHHHHHHHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQS-SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR 196 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r 196 (461)
..|.+.+++|.+..+.+++.. ...++..++.++.|+++||+|+|+.+.++.++.+++.++. +.. .++.+.+.+.-
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~l~~~~ 323 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHH
Confidence 344556679999999999974 6678999999999999999999998877666555544322 232 14565666666
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhc
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
+++.++.|...+...++..+..+++.+++..++.+....+|..+++.+.|.+.+..||+..|.+.++++++.++...+..
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666667777889999999999999999999999999999999999999999999999998888888776666553
No 155
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.48 E-value=2e-12 Score=127.39 Aligned_cols=164 Identities=18% Similarity=0.069 Sum_probs=124.8
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccc-H-HHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS-L-LALLA 194 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~-~-~~l~~ 194 (461)
......|.+.+++|.+.....+......+...++.++.|+++||+|||++++.+.++.+++.++.+.....+ . .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 344456888888998888788888888889999999999999999999999999999888877765431011 1 12233
Q ss_pred HHHHHhhhhhc-hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhhcCchhHHHHHHHHHHH
Q 012519 195 MRAVVGLAEGV-ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL------MSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 195 ~r~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l------~~~~gwr~~f~~~~~~~~~ 267 (461)
+-++.+++.+. ..+....++.|.+|+++|++++|+......+|..+++.+.+.+ .+..+|++.|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 34444444443 3467889999999999999999999999999999887666544 3578899999998888777
Q ss_pred HHHHHHHhcCCCC
Q 012519 268 WVLVWLSATSSTP 280 (461)
Q Consensus 268 ~~~~~~~~~~~~~ 280 (461)
..++.+++.||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 7777666666554
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=6.6e-12 Score=115.51 Aligned_cols=163 Identities=20% Similarity=0.205 Sum_probs=136.4
Q ss_pred HHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHH
Q 012519 112 NADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLA 191 (461)
Q Consensus 112 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 191 (461)
......+..+-|.+++..|++.+.++++.-.|.++..++..+.|+++|| +.|+.+.....+..+..+...+.. ++.+.
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-~~~~~ 302 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-ASPAL 302 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-chHHH
Confidence 3344567778899999999999999999999999999999999999999 999999988787777777665552 56667
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
.++.-++.|++.+.........+++. -++.+..+.++....+++|..+|..+||.+.+++|+....++.+++.++..++
T Consensus 303 ~~~~~~~wg~a~~~~~~~~~~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 303 ALALLFLWGFAFSPALQGLQTRLARL-APDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLL 381 (394)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHhccc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 77777778887776666666666663 35889999999999999999999999999999999999999999998888777
Q ss_pred HHHhcC
Q 012519 272 WLSATS 277 (461)
Q Consensus 272 ~~~~~~ 277 (461)
.+...+
T Consensus 382 ~~~~~~ 387 (394)
T COG2814 382 ALLSAR 387 (394)
T ss_pred HHHHHh
Confidence 666543
No 157
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1.4e-12 Score=118.59 Aligned_cols=181 Identities=19% Similarity=0.112 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh--cchH-HHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKI-IMAWGVALW 174 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~-~~~~~~~~~ 174 (461)
..++.+++++++.+..+..+.--.|. +.|..|.+..++++..+++-++...+.+++|+++||+ |||. +-++.++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 45677778888888777777666654 5567799999999999999999999999999999995 6775 445555555
Q ss_pred HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC
Q 012519 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG 253 (461)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~g 253 (461)
.++.+..-++++.|+++..++-++.|+..-+..-..-....|..|++--|.+.|+...+..+ |...+....+++.+.+|
T Consensus 332 ~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 332 TASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC
Confidence 55666666664456788999999999987777777777789999999999999999999999 99999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCC
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSST 279 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~ 279 (461)
|...|.+..+.+++..++.+.....+
T Consensus 412 W~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 412 WDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998888887777666554433
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.47 E-value=6.9e-12 Score=122.39 Aligned_cols=154 Identities=21% Similarity=0.205 Sum_probs=138.8
Q ss_pred hHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 118 ~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
+...+|.+. +++|.++..+|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..+++ ++.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~--~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS--PSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc--hHHHHHHHHH
Confidence 344567665 5689999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (461)
++.|++.........+.+.+..|++.||++++++.+....+..+|..+.|.+.+.+|-+..+.+.++..++..++.+
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888999999999999999999999999999999999999999999999999999887776655555444
No 159
>PRK09952 shikimate transporter; Provisional
Probab=99.46 E-value=1.1e-11 Score=120.38 Aligned_cols=152 Identities=11% Similarity=0.042 Sum_probs=115.0
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc--ccccHHHHHHHHHHHhh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMRAVVGL 201 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~~r~l~G~ 201 (461)
.+.+++|.+......+.....+...++.++.|+++||+|||++++.+.++..++.+..... ..++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 4456788888776666666777778889999999999999999988877665554332221 11345555566677788
Q ss_pred hhhchhhHHHHHHHhhcCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHHHh
Q 012519 202 AEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 202 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
+.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 888888889999999999999999999854 445589999999999998854 48888888777777766665543
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.46 E-value=4e-12 Score=121.98 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=124.3
Q ss_pred CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhH
Q 012519 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (461)
Q Consensus 130 ~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 209 (461)
+.+....|++.++..+...++.+..|++.||+|+|+.+.++.++.+++..+.+.+ ++.+.+++.+++.|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA--TTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHH
Confidence 5566778999999999999999999999999999999999999999888887777 89999999999999998777777
Q ss_pred HHHHHHhhcCchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 210 MNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
...++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|.+.+++.++..+...+
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888777766 678899999999999999999999999999999888776665543
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.46 E-value=2.9e-12 Score=121.44 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=119.8
Q ss_pred hhhhhhhhh-cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccc-cHHHHHHHHH
Q 012519 120 VAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT-SLLALLAMRA 197 (461)
Q Consensus 120 ~~~~~i~~~-~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~-~~~~l~~~r~ 197 (461)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++.++..+. + +++.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--PPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--chhHHHHHHHHH
Confidence 456666665 89999999999999999999999999999999999999999888888888888777 6 4888889999
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
+.|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+++.+.+++|
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999988754
No 162
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.44 E-value=1e-11 Score=118.85 Aligned_cols=151 Identities=18% Similarity=0.122 Sum_probs=117.2
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc-c---ccccHHHHHHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-A---ADTSLLALLAM 195 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~---~~~~~~~l~~~ 195 (461)
..+.+.+|.|.+++++|++.....+ ...++.++.|++.||+|+|+.+.++.++.++..+.... . ..++.+.++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 3455566789999999999888764 66677899999999999999998877666333322211 1 01344555556
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
.++.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.++.||+..|++.+++.++..+.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 6677777787788888888888766 789999999999999999999999999999999999999888776665443
No 163
>TIGR00895 2A0115 benzoate transport.
Probab=99.44 E-value=5.4e-12 Score=121.10 Aligned_cols=141 Identities=21% Similarity=0.220 Sum_probs=114.1
Q ss_pred HHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 012519 106 LALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (461)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 185 (461)
+..++............|.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+....+...+..++....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (398)
T TIGR00895 257 LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTL- 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh-
Confidence 3333333444445556678888999999999999999999999999999999999999955544444443333333334
Q ss_pred cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 186 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
++.+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 336 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 -FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 67788888899999999999999999999999999999999999999999999999998875
No 164
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.44 E-value=1.7e-11 Score=118.44 Aligned_cols=157 Identities=15% Similarity=0.161 Sum_probs=136.6
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcch--HHHHHHHHHHHHHHHHhhc--------ccc
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTPW--------AAD 186 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~--------~~~ 186 (461)
..........+++|++..+...+..+..+..+++++++|++.||+|.| ++++++++++.+..+...+ .
T Consensus 300 i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~-- 377 (477)
T PF11700_consen 300 IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL-- 377 (477)
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc--
Confidence 334444555668999999999999999999999999999999999999 8988888888665555444 4
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHH
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSG 265 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~ 265 (461)
++-+.+++.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||++.+.+.+..| -|+.++...++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999999999999887 888888888777
Q ss_pred HHHHHHHHHh
Q 012519 266 FLWVLVWLSA 275 (461)
Q Consensus 266 ~~~~~~~~~~ 275 (461)
++.+++.++.
T Consensus 458 ~~gl~ll~~v 467 (477)
T PF11700_consen 458 LIGLILLFFV 467 (477)
T ss_pred HHHHHHHhhc
Confidence 7766666544
No 165
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.42 E-value=8.9e-12 Score=121.33 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=110.5
Q ss_pred hhhhhhh-cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHh
Q 012519 122 IVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 122 ~~~i~~~-~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (461)
.+.+.++ ++ +..+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.|
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 322 (437)
T TIGR00792 245 QVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAG 322 (437)
T ss_pred hheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHH
Confidence 3444333 34 566778888888999999999999999999999999999998888877766652 46677778888999
Q ss_pred hhhhchhhHHHHHHHhhcC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 201 LAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
++.+...+...++++|..+ ++++|.+.++.+....+|..+++.+.+.+.+..||.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999899999999998865 456799999999999999999999999999887774
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=99.40 E-value=3.5e-11 Score=116.84 Aligned_cols=141 Identities=17% Similarity=0.091 Sum_probs=104.1
Q ss_pred HhhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH-Hh-hccccccHHH
Q 012519 115 RVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LT-PWAADTSLLA 191 (461)
Q Consensus 115 ~~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~-~~~~~~~~~~ 191 (461)
........|.+.+ .+|.+..+.++....+.++..++.++.|+++||+|||++++++.++..+... .. .....+++..
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFAR 333 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3344455666554 4799999999999999999999999999999999999988876554433221 11 1111145555
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcCch
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
+.+..++.|++.+...+....++.|.+|+++|+.++++... +..++..++|.+.+.+.++.|++
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 334 MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 55556666777777777777889999999999999999644 44456788999999999988865
No 167
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.6e-11 Score=120.64 Aligned_cols=139 Identities=13% Similarity=0.142 Sum_probs=115.9
Q ss_pred hhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc-cccHHHHH
Q 012519 116 VVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALL 193 (461)
Q Consensus 116 ~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~ 193 (461)
.......|.+.+ .+|.++.+.+++...+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.. .++.+.+.
T Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
T PRK10504 278 GMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 344555666555 5899999999999999999999999999999999999999999888888766655532 13445555
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
+..++.|++.+...+....++.+..|+++++.+.++.+....+|..+|+.+++.+.+..|+
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6678889998888889999999999999999999999999999999999999999877665
No 168
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=9.9e-12 Score=120.72 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc--chHHHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSL 176 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i 176 (461)
..+....+...+...........+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4556666667777777778888899999999999999999999999999999999999999988 55688888899999
Q ss_pred HHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-ch
Q 012519 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr 255 (461)
+.+.++++ ++++.++...++.|++.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..| |.
T Consensus 378 ~~~~~p~~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFA--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 99999999 9999999999999999999888888899999999999999999999999999999999999998887 99
Q ss_pred hHHHHHHHHHHHHHHHHHHhc
Q 012519 256 GPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~ 276 (461)
..|+..++..++..+++++..
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999998888776666553
No 169
>PRK10054 putative transporter; Provisional
Probab=99.39 E-value=1.3e-11 Score=118.11 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=125.9
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhch
Q 012519 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (461)
Q Consensus 127 ~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 206 (461)
++.+.+....+++.+.+.+......++.|++.||+++|+.+..++.+..++.+...+.. ++.+.+++..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG-NSLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888888888889999999999999999999988888887776541 56777788889999999888
Q ss_pred hhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
.|....++.+..|++.|+++.+..+ ...+|..+||.++|.+.++.|.+..|++.+....+..++.+.-.+|+|
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 8888999999999999999998765 566899999999999999999998998877777666666554444444
No 170
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.39 E-value=4.6e-11 Score=111.22 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=133.1
Q ss_pred hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchh
Q 012519 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (461)
Q Consensus 128 ~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 207 (461)
+-+.++..+|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=.++++++ ++.+.+.+.+.+.|+-.+...
T Consensus 253 ~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~--~~~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 253 SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA--TNPWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh--cchHHHHHHHHHHHHHHHHHH
Confidence 334456779999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred hHHHHHHHhhcCchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012519 208 PAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (461)
Q Consensus 208 ~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (461)
.....|+++.+|+|-.++...+. +...++|..+.+.++|.+.|+.|.+.+|++.+.+.+...++..+.++++++
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999999999988888888874 788999999999999999999999999999999988888888877765543
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.38 E-value=2.5e-11 Score=117.96 Aligned_cols=162 Identities=11% Similarity=-0.026 Sum_probs=112.3
Q ss_pred hHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH---HHHHHhhccccccHHHHH
Q 012519 118 MSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LATFLTPWAADTSLLALL 193 (461)
Q Consensus 118 ~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~~~~~~~~~~l~ 193 (461)
.....|.+.+ ..|.+..+.++....+.++..++.++.|+++||+|+++....+..+.. ++.+........+.+...
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDM 349 (438)
T ss_pred HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 3344555554 468999999999999999999999999999999975432222322221 222222222113444444
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG-NAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (461)
+.-++.|++.............|.+|+++|+.+.|+.+....+| ..+||.+.+.+.++.||...|++.++..++..+..
T Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 429 (438)
T TIGR00712 350 ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 429 (438)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 44555565433333333456789999999999999998887776 57899999999999999999999888877777777
Q ss_pred HHhcCCC
Q 012519 273 LSATSST 279 (461)
Q Consensus 273 ~~~~~~~ 279 (461)
+++.+|+
T Consensus 430 ~~~~~~~ 436 (438)
T TIGR00712 430 IVVMIGE 436 (438)
T ss_pred HHHHhhc
Confidence 7666654
No 172
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.38 E-value=2.3e-11 Score=105.91 Aligned_cols=179 Identities=17% Similarity=0.102 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 177 (461)
|..+........ .....+.++..-|++++.+|.|.+|...+.+...+|..+ .++.|.+.|++|++.++.+|.+...+|
T Consensus 2 W~~l~a~~~v~~-~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 2 WLSLVASIWVQL-CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred hhhHHHHHHHHH-hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 444444444333 334566788889999999999999999999999999986 588899999999999999999999999
Q ss_pred HHHhhcc-----ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 178 TFLTPWA-----ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 178 ~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
..+...+ ...++|.+.+..++.|.+.+....++.....+.|| ++||.+.|+.-...+++..+-..+...+.+.-
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 8876554 12578999998999999888777888787889997 68999999999999999888877777665542
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 253 GIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
.-+ .+++.+....+..+...++.+..|
T Consensus 159 ~~~-fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 159 PSS-FLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred hHH-HHHHHHHHHHHHHHHHhhheeccC
Confidence 233 333344433333333333344333
No 173
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.38 E-value=9.3e-11 Score=107.85 Aligned_cols=156 Identities=16% Similarity=0.133 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhh---hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 104 LALALALCNADRVVMSVAIVPLSL---AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
..++.++............+.+.+ .+|.++.+.++..+.+..+..++.++.+++.||+|+|+++.++..+..++.++
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 344444444334444444444443 36899999999999999999999999999999999999999888888887766
Q ss_pred hhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHH
Q 012519 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (461)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 260 (461)
.... ++...+ .+-++.|++.+..+|...+...+..|+ +.+.+.++. ....+|..++|++.|.+.+..|.+..|++
T Consensus 225 ~~~~--~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 225 AALT--HGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHc--CCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 6555 444333 355688999999999999999998864 456666775 56679999999999999999999998875
Q ss_pred HHHH
Q 012519 261 FGLS 264 (461)
Q Consensus 261 ~~~~ 264 (461)
..+.
T Consensus 300 ~~~~ 303 (310)
T TIGR01272 300 PVPC 303 (310)
T ss_pred HHHH
Confidence 4443
No 174
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.38 E-value=1.9e-11 Score=116.38 Aligned_cols=142 Identities=16% Similarity=0.050 Sum_probs=105.5
Q ss_pred hhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc-chHH-HHHH-HHHHHHHHHHhhccccccHHHH
Q 012519 117 VMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKII-MAWG-VALWSLATFLTPWAADTSLLAL 192 (461)
Q Consensus 117 ~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~-~~~~-~~~~~i~~~~~~~~~~~~~~~l 192 (461)
......|. +.+++|.+..+.+++.+.+.++..++.++.|++.||++ +|+. +... .....++..........+.+.+
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMD 313 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHH
Confidence 34444444 45668999999999999999999999999999999864 3332 2222 1222222222222211455666
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 258 (461)
++..++.|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 314 LICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 677778887666666677788999999999999999999999999999999999999999999764
No 175
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.38 E-value=7e-12 Score=123.97 Aligned_cols=163 Identities=20% Similarity=0.073 Sum_probs=109.4
Q ss_pred hHhhhhhhhhhcCCCchhHHH------------HHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 012519 118 MSVAIVPLSLAHGWSRSFSGI------------VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (461)
Q Consensus 118 ~~~~~~~i~~~~~~s~~~~~~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 185 (461)
.....|.+.++.|.+..+.+. ......++..++.++.++++||+|||++++++.++.+++.++.++..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 334467777777776543211 22344456667888999999999999999988888777766555431
Q ss_pred c--ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh----------cC
Q 012519 186 D--TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------AG 253 (461)
Q Consensus 186 ~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~g 253 (461)
. ++...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.+++|.+.+++.+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 0 11111111112222222234556777889999999999999999999999999999999998873 34
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (461)
+...|++.+++.++..+.. ++.||+..
T Consensus 467 ~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred chHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 5667888887777665544 45566543
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.37 E-value=4.7e-11 Score=114.96 Aligned_cols=156 Identities=13% Similarity=0.033 Sum_probs=122.2
Q ss_pred hhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc---cccHHHHHHHHH
Q 012519 122 IVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLAMRA 197 (461)
Q Consensus 122 ~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~---~~~~~~l~~~r~ 197 (461)
.|.+ .+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++..++.++.++.. .++++.++++-+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 4443 567899999999998888889999999999999999999999998888877776665431 146777788889
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcC
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 277 (461)
+.|++.+...+......... ++++||++.+..+....+|..+|+.+++.+.+..+|....+..++.+++.+++...+.+
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLK 396 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988777666665444 45899999999999999999999999999988888776666655555555454444443
Q ss_pred C
Q 012519 278 S 278 (461)
Q Consensus 278 ~ 278 (461)
+
T Consensus 397 ~ 397 (406)
T PRK15402 397 D 397 (406)
T ss_pred c
Confidence 3
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.36 E-value=1.4e-10 Score=110.96 Aligned_cols=148 Identities=15% Similarity=0.144 Sum_probs=119.1
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHh
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (461)
..|.+.+++|.+..+.+++...+.++..++.++.+++.||.+++..+....+...+..++.... ++.+.+.+..++.|
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~G 316 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWG--SDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHH
Confidence 3466777889999999999999999999999999999999654433443333344444444455 67888888899999
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
++.+...+...+++.+..| ++++++.++......+|..+|+.++|.+.+..|++..++..+.+.++..+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 9999999999989999887 567788888888999999999999999999999999998877766554443
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.34 E-value=1.6e-10 Score=111.13 Aligned_cols=148 Identities=18% Similarity=0.131 Sum_probs=109.4
Q ss_pred hhhhhhcCCCchhHHHHHHHH-HHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh---hccccccHHHHHHHHH-
Q 012519 123 VPLSLAHGWSRSFSGIVQSSF-LWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMRA- 197 (461)
Q Consensus 123 ~~i~~~~~~s~~~~~~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r~- 197 (461)
+.+.+++|.+..+++++.+.. .++..++.++.|++.||+|+|+.+.++.++..+..+.. ++.+ ++.+.+++.-+
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~~ 312 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIGI 312 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHH
Confidence 456677899999999998665 45688999999999999999998887777666554433 3331 45566655543
Q ss_pred ---HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 198 ---VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 198 ---l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+.+++||+..|.+.++++++..++.+.
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 45566666677777777777775554 45555567777777778999999999999999998888776665544
Q ss_pred h
Q 012519 275 A 275 (461)
Q Consensus 275 ~ 275 (461)
.
T Consensus 389 ~ 389 (402)
T PRK11902 389 M 389 (402)
T ss_pred H
Confidence 3
No 179
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.33 E-value=5.1e-11 Score=114.23 Aligned_cols=152 Identities=16% Similarity=0.136 Sum_probs=120.3
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh-hhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-YYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 198 (461)
...|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.++.+..+.++.+++.++.++. ++++.+++..++
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV--SNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 4466666666557888999988888777766666677776 4676777788888888888888788 888888888888
Q ss_pred HhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---Cc-hhHHHHHHHHHHHHHHHHH
Q 012519 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---GI-FGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 199 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gw-r~~f~~~~~~~~~~~~~~~ 273 (461)
.|++.+...+...+++.+..|+++||+++++.+....+|..+||.++|.+.++. ++ ...+++.++++++..+...
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 999988888899999999999999999999999999999999999999999874 33 4555555555555544433
No 180
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.33 E-value=2e-10 Score=111.43 Aligned_cols=156 Identities=17% Similarity=0.082 Sum_probs=101.8
Q ss_pred hHhhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh--ccccccHHHHHH
Q 012519 118 MSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--WAADTSLLALLA 194 (461)
Q Consensus 118 ~~~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~ 194 (461)
....+|.+ .+++|.+..+.++..++..++..++.++.|+++||+|||+.++++.++.++..+... ....++.+..+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 33445554 466899999999999988888899999999999999999988776665433332111 110133333222
Q ss_pred HHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHH
Q 012519 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 195 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~ 272 (461)
.-.+.+++.+...+....+++|++|++.|+.++|+.+....+ .....|.+.+.+ +..| |...++..++..++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 223333334444456678899999999999999998866554 344577777755 4456 5556666666665555554
Q ss_pred HH
Q 012519 273 LS 274 (461)
Q Consensus 273 ~~ 274 (461)
++
T Consensus 421 ~~ 422 (432)
T PRK10406 421 LM 422 (432)
T ss_pred HH
Confidence 44
No 181
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.32 E-value=2.8e-10 Score=107.86 Aligned_cols=168 Identities=17% Similarity=0.214 Sum_probs=129.4
Q ss_pred HHHHHHhhhHhhhhhhhhhcC-CCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccc
Q 012519 110 LCNADRVVMSVAIVPLSLAHG-WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (461)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~-~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 188 (461)
+.......+....+...++.| .+....+.+.++..++-...-...+++..|+|.|+++.++.+..++=..+.+... ++
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~-~~ 296 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS-DP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 333334445555566677777 6777888888888888899999999999999999999999999999888877762 23
Q ss_pred HHHH----HHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcCch------hH
Q 012519 189 LLAL----LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF------GP 257 (461)
Q Consensus 189 ~~~l----~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~gwr------~~ 257 (461)
.+.. +....++|+..+..+.++..++.+..|++.|+++.+++++ ..++|..+|..++|++.+++|-+ ..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 3332 3345679999999999999999999999999999999876 57899999999999999987744 44
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 012519 258 FVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~ 278 (461)
+.+.+++.++..++.+++.+|
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 555555555555554444444
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=2.6e-10 Score=108.86 Aligned_cols=151 Identities=14% Similarity=0.029 Sum_probs=113.1
Q ss_pred hhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc-cccccHHHHHHHHHHH
Q 012519 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-AADTSLLALLAMRAVV 199 (461)
Q Consensus 121 ~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~~r~l~ 199 (461)
..|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... . ++.+..++..++.
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~ 299 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG--GMKTASLIFAFIC 299 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHH
Confidence 345566678999999999999999999999999999999999999999988888887765543 4 5556666666777
Q ss_pred hhhhhchhhHHH-HHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHHh
Q 012519 200 GLAEGVALPAMN-NMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 200 G~~~g~~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
+++.....+... ....+..+++.++.+. .+....+|..+||.+++.+.+. .+|++.+.+.+++.++........
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 300 CAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 776554444434 3444444555555543 4667889999999999999985 689999999877766654444433
No 183
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.31 E-value=4.4e-09 Score=105.21 Aligned_cols=157 Identities=18% Similarity=0.243 Sum_probs=128.2
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHHHHHhhccccc------cHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLTPWAADT------SLLAL 192 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~------~~~~l 192 (461)
.....+.+.+|.+.+++..+...+....-+..+++|+++|+ +|+++.++++.++..+|.++.++...+ .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34445566789999999999999999999999999999996 799999999999999998887765211 12346
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcCch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CchhHHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFG 262 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------gwr~~f~~~~ 262 (461)
+++-.+..+|.|+.-+...+...|.++++ +|-..+.++..+.++|.++++++.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67778888999999999999999999753 4778899999999999999999999887543 6999999998
Q ss_pred HHHHHHHHHHHHhc
Q 012519 263 LSGFLWVLVWLSAT 276 (461)
Q Consensus 263 ~~~~~~~~~~~~~~ 276 (461)
++.++..++.+...
T Consensus 169 i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 169 ILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHhc
Confidence 88887776655443
No 184
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.31 E-value=5.9e-11 Score=116.37 Aligned_cols=148 Identities=17% Similarity=0.026 Sum_probs=106.9
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcch-------HHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK-------IIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (461)
.+.+++|.+..+.+++.+++.++..++.+++|+++||+||| ..+.+..++.++..++.+.. ++.+..++.-
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~--~~~~~~~~~~ 355 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA--NSLGAAIVVM 355 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc--chHHHHHHHH
Confidence 34567899999999999999999999999999999999865 23333444444444445555 6666666666
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
++.+++.+...+...+++.+.. +++||.+.|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++.
T Consensus 356 ~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 356 ILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6777766666666666677765 478999999988777777777766543 1123469999999988887776665554
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.30 E-value=1.5e-10 Score=109.43 Aligned_cols=136 Identities=17% Similarity=0.082 Sum_probs=109.8
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-cchHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (461)
.....+|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+ +||+.+.++.++.+++.++..+. ++.+... .
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA--PMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHH-H
Confidence 334456777778899999999999999999999999999999999 56777788888888887777766 4333222 4
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-ch
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr 255 (461)
-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.| |.
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 567899999888888887776554 5677999999999999999999999999999876 44
No 186
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.30 E-value=4.7e-11 Score=114.95 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhc--CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHH-HHHHHHHHHHHHH
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAH--GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-MAWGVALWSLATF 179 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~i~~~ 179 (461)
...+.+++.......+...+|.+.+++ +.+..+.++..+...++..++.++.|+++||+++|+. +....++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 334444444444445566677777765 5677889999999999999999999999999997774 4444444444433
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPF 258 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f 258 (461)
+.... ++....+++-++.++|.....+.......|.+|+++|+.++|+.+....+|..++|.+.+.+.+..| |++.|
T Consensus 326 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~ 403 (412)
T TIGR02332 326 LASAT--DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGL 403 (412)
T ss_pred HHHhc--CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhH
Confidence 32222 3322222222333344333334444555778899999999999999999999999999999999875 99999
Q ss_pred HHHHHHH
Q 012519 259 VIFGLSG 265 (461)
Q Consensus 259 ~~~~~~~ 265 (461)
++.++..
T Consensus 404 ~~~~~~~ 410 (412)
T TIGR02332 404 WFVAALL 410 (412)
T ss_pred HHHHHHH
Confidence 8776643
No 187
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.30 E-value=3.5e-11 Score=115.71 Aligned_cols=161 Identities=19% Similarity=0.137 Sum_probs=131.0
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh---c--chHHHHHHHHHHHHHHHHhhccc--cccH
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY---G--GKIIMAWGVALWSLATFLTPWAA--DTSL 189 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~---G--rr~~~~~~~~~~~i~~~~~~~~~--~~~~ 189 (461)
......+.+.+++|+++++.....+...+...+ .++.|.++|-+ | ||+-++++.++..++.+..+..+ ..+.
T Consensus 8 ~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 8 SRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 344567888999999999999999999998865 77889999975 3 55677777777766666555542 1356
Q ss_pred HHHHHHHHHHhhhhhchhhHHHHHHHhhcC--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 012519 190 LALLAMRAVVGLAEGVALPAMNNMVARWFP--QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 190 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 267 (461)
....+.-++..+|.+....++-+++.|... ++.||...+.......+|.+++..++|.+.+..+++..|.+.+++.++
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 677777788899999999999999999873 344888899999999999999999999999999999999999888888
Q ss_pred HHHHHHHhcCC
Q 012519 268 WVLVWLSATSS 278 (461)
Q Consensus 268 ~~~~~~~~~~~ 278 (461)
..+..++..+|
T Consensus 167 ~~~~~~~~~~e 177 (433)
T PF03092_consen 167 MLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhh
Confidence 77777777665
No 188
>TIGR00898 2A0119 cation transport protein.
Probab=99.29 E-value=2e-10 Score=114.07 Aligned_cols=148 Identities=19% Similarity=0.110 Sum_probs=114.4
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
.++++.+.. +......+....+.++.+++.||+|||+.+.++.++.+++.++..+.+..+.+..++.-++.+++.+.
T Consensus 350 ~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 350 LGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred ccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 344454432 33345566777888899999999999999999999999888887776222235556666777787787
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 279 (461)
.++..+.+..|.+|++.|+.++|+.+....+|.+++|.+.+ + ...++..++++.++..++..++.++ .||+
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 88889999999999999999999999999999999999988 4 4456778888888877776666554 4554
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.27 E-value=4.1e-10 Score=107.46 Aligned_cols=175 Identities=16% Similarity=0.105 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
.+++.+++.+.....++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.+...++.....
T Consensus 256 llslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 256 LLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 33444444444444455555555444 22333333334455677888999999999999999999999887777664322
Q ss_pred cc-c---cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCc---------------------hhhhHHHHHHHHHHHHH
Q 012519 183 WA-A---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ---------------------TERARAVAIAMGGFTSG 237 (461)
Q Consensus 183 ~~-~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~G 237 (461)
.. + ..+++.+.+.-+...++.|......+.++.+++|+ ++-|.+.|+..+...+|
T Consensus 335 l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~G 414 (462)
T PRK15034 335 LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVG 414 (462)
T ss_pred HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcc
Confidence 22 1 13567777766666666777777888888888874 25688999999999999
Q ss_pred HHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHhcCC
Q 012519 238 NAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 238 ~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~ 278 (461)
..+-|.+.+...+..| +...|++..+..+++.++.+...-+
T Consensus 415 gf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 415 GFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred cchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999988788777655 8888988888888777766665433
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=99.26 E-value=4.5e-10 Score=109.61 Aligned_cols=138 Identities=19% Similarity=0.151 Sum_probs=110.1
Q ss_pred hhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Q 012519 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (461)
Q Consensus 117 ~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (461)
......+.+. +.+|.+....++......++..++.++++++.||+|+|+++.++.++..++.++..+.+.++++.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 3333455443 446766555555555556778889999999999999999999999998888877766533467778888
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.++.|+|.+...+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999988754 359999999999999999999999998877665
No 191
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.26 E-value=1.7e-10 Score=105.33 Aligned_cols=172 Identities=16% Similarity=0.181 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
..+++.-..+.++.+. .....-..-.+++|++..+..++.....+..+++++++|++.||+|.|+++.++.++..+.++
T Consensus 255 ~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 255 VLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 3344444444444432 222223334459999999999999999999999999999999999999999999999999988
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPF 258 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f 258 (461)
...+. ..-..+.++..+.|+..|..+..+.++.++.+|++|-++.+|+++.....+..+||.+.+.+.+..| -|..+
T Consensus 334 ~~~~~--~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 334 YLIFL--EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHc--cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 87777 6666777788999999999999999999999999999999999999999999999999999988766 67776
Q ss_pred HHHHHHHHHHHHHHHH
Q 012519 259 VIFGLSGFLWVLVWLS 274 (461)
Q Consensus 259 ~~~~~~~~~~~~~~~~ 274 (461)
....++..+.++..+.
T Consensus 412 ~~i~vll~iGl~~L~~ 427 (438)
T COG2270 412 LSIIVLLLIGLLLLLR 427 (438)
T ss_pred HHHHHHHHhhHhhEEe
Confidence 6666655554444333
No 192
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.25 E-value=2.4e-10 Score=104.27 Aligned_cols=175 Identities=17% Similarity=0.110 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+.+++.++..+.....++..+|. +.++|+.+..++|.....+.+...+..+.+|+++||+|.+|++.+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 344555666655655566666665 5667999999999999999999999999999999999999999999999988888
Q ss_pred Hhhccc-----cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-
Q 012519 180 LTPWAA-----DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG- 253 (461)
Q Consensus 180 ~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g- 253 (461)
+..+.. ..+....++.-+..++..|.-...++.++..++| ++-|.+.|+.....++|...-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 877662 1234444444445555555555567788888885 688999999999999999999999999988888
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc
Q 012519 254 IFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
+...|++.....+++.+..+...
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888777655543
No 193
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.23 E-value=3.5e-10 Score=107.48 Aligned_cols=182 Identities=16% Similarity=0.117 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
...+.+.......+..........+-++-|++..++.+......+...+..+++..+.||+|||+.++.+..+..+..++
T Consensus 272 ~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 33333333334444455666667788888999999999999999999999999999999999999999999999888777
Q ss_pred hhccc--cccH--H---HHHHHHHHHhhhhh-chhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 181 TPWAA--DTSL--L---ALLAMRAVVGLAEG-VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 181 ~~~~~--~~~~--~---~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
..... .... | ..+++.++..++.+ +.-|...-+.+|.+|++.|+.++++......+..++-...-..+.+.+
T Consensus 352 ~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~ 431 (485)
T KOG0569|consen 352 MSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI 431 (485)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55441 0111 1 12334444433333 246788889999999999999999999999999888888777777777
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 012519 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRH 283 (461)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (461)
|- +.|+...+++++..+..++.+||++.+.
T Consensus 432 g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 432 GP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred cc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 75 7888889999999999999998886543
No 194
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.23 E-value=2.8e-10 Score=124.36 Aligned_cols=143 Identities=17% Similarity=0.193 Sum_probs=123.0
Q ss_pred hhhhhhcCCCch-hHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhh
Q 012519 123 VPLSLAHGWSRS-FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (461)
Q Consensus 123 ~~i~~~~~~s~~-~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~ 201 (461)
+.+.+.+|.+.. +.+++.+...++.+++.+++|++.||+++|+++.++.++.+++.++..+. .+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHH
Confidence 345567899998 99999999999999999999999999999999999999888888888888 888888899999999
Q ss_pred hhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCchhHHHHHHHHHHH
Q 012519 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 202 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~ 267 (461)
+.++..+...+++.+..|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888888877654 23455666665554443
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.22 E-value=3.6e-10 Score=111.63 Aligned_cols=134 Identities=15% Similarity=0.229 Sum_probs=114.8
Q ss_pred Hhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc--cccccHHHHHHH
Q 012519 119 SVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--AADTSLLALLAM 195 (461)
Q Consensus 119 ~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~~ 195 (461)
....|.+. +.+|.++.+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ .+..+++.++..
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 34455544 457999999999999999999999999999999999999999999988888877663 222467777788
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
.++.|+|.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++.
T Consensus 355 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 355 QFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999888888888888899999999999999999999999999999987753
No 196
>PRK10133 L-fucose transporter; Provisional
Probab=99.21 E-value=1.6e-09 Score=104.90 Aligned_cols=141 Identities=11% Similarity=0.100 Sum_probs=115.3
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+. ++.+ .+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA--GGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc--CChH-HHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999988887777766666 5543 34556789999999
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHH
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~ 271 (461)
.+|..++...+..| ++.+.+.++... ..+|..++|++.+.+.+..| -|..|++..+..+.....
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 99999999999986 456777777764 44788999999999999887 788888666555544433
No 197
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.20 E-value=1.2e-09 Score=104.41 Aligned_cols=139 Identities=14% Similarity=0.160 Sum_probs=103.8
Q ss_pred hhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc---cccHHHHHHH
Q 012519 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLAM 195 (461)
Q Consensus 120 ~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~---~~~~~~l~~~ 195 (461)
...|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+.. .++.+.+++.
T Consensus 227 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (385)
T TIGR00710 227 SGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGP 306 (385)
T ss_pred HcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 33454 4457899999999999999999999999999999999999999888888777766655431 1234556667
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCchhHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAGIFGPFVI 260 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~gwr~~f~~ 260 (461)
.++.|++.+...+.......|..| ++|+++.++.+..... |.+.++.+ +.+.+..+|...+..
T Consensus 307 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 307 MMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV-SLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH-HhccccChHHHHHHH
Confidence 788999999888998899999886 6899999998877655 55555554 444444344443333
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.19 E-value=2.3e-09 Score=102.77 Aligned_cols=135 Identities=16% Similarity=0.070 Sum_probs=97.8
Q ss_pred hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhh
Q 012519 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (461)
Q Consensus 125 i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g 204 (461)
+.+++|.+..+.+.+.+...++..++.++.+++.||+|||+++.++..+..++.++..+. ++.+..+..-++.++|.+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS--PSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999988888887776 555544444444444444
Q ss_pred chhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 012519 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (461)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 266 (461)
...+. ....+..|.++|+ +.......++..+|+.+++++.+..|+.....+.+.+.+
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 364 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILIA 364 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 33333 2334455555553 444455667888888888888888888765555554443
No 199
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.19 E-value=4.7e-10 Score=110.10 Aligned_cols=172 Identities=14% Similarity=0.075 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHH--------HHHHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII--------MAWGVA 172 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--------~~~~~~ 172 (461)
....+..+........+...+|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+. +..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 334444444444444444556654 56689999999999999999999999999999999875421 111111
Q ss_pred HH--HHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 173 LW--SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 173 ~~--~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
.. ++..+..... ..+.+..+++-++.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+
T Consensus 344 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 344 GLGPGIFAYALPYL-SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 11 1111112221 1344444555555566555555555555667775 589999999999999999999999998876
Q ss_pred hc---CchhHHHHHHHHHHHHHHHHHHh
Q 012519 251 QA---GIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 251 ~~---gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
.. +|+..|++.++..++..++..++
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 43 38889999888877766655544
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=99.17 E-value=1.5e-09 Score=105.79 Aligned_cols=133 Identities=8% Similarity=0.099 Sum_probs=101.3
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhh
Q 012519 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (461)
Q Consensus 123 ~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~ 202 (461)
..+.++.--+....+.+.....+...++.+++++++||+|+|+.+.++.++..++.+...+.+.++.+.+++..++.|++
T Consensus 253 ~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 332 (444)
T PRK09669 253 LYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFI 332 (444)
T ss_pred heeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHH
Confidence 34433332234444556667778888899999999999999999998887666544433332226788888888999999
Q ss_pred hhchhhHHHHHHHhhcCc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 203 EGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
.+...+...++++|..+. ++.|...+.......+|..+|+.+++.+.+..|+.
T Consensus 333 ~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 333 QNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999998852 23467788999999999999999999998877763
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.16 E-value=2.5e-09 Score=104.95 Aligned_cols=139 Identities=14% Similarity=-0.010 Sum_probs=108.0
Q ss_pred hhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc---cccccHHHH
Q 012519 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW---AADTSLLAL 192 (461)
Q Consensus 116 ~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~l 192 (461)
.......+.+.+....+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ....+.+.+
T Consensus 248 ~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (473)
T PRK10429 248 NIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLI 327 (473)
T ss_pred HHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHH
Confidence 34444445555554445667778888878899999999999999999999999888876666554332 222567778
Q ss_pred HHHHHHHhhhhhchhhHHHHHHHhhcC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 193 LAMRAVVGLAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
++.-++.|++.+...+...++++|..+ .++.|..++.......+|..+++.+.+.+.+..|+
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888889999999999999999999965 23346689999999999999999999999887665
No 202
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.16 E-value=4.9e-10 Score=105.58 Aligned_cols=126 Identities=19% Similarity=0.238 Sum_probs=108.3
Q ss_pred hhHhhhhhh-hhhcCCC-chhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc-cccHHHHH
Q 012519 117 VMSVAIVPL-SLAHGWS-RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALL 193 (461)
Q Consensus 117 ~~~~~~~~i-~~~~~~s-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~ 193 (461)
......|.+ .+++|.+ ..+.+++.+...++..++.++.|++.||+|+|+...+......++.+...+.. .++....+
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLI 303 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 355556664 8889999 79999999999999999999999999999998888887777777777666551 13557777
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 242 (461)
+.-++.|++.+...+....++.|.+|+++||++.++.+...++|..+||
T Consensus 304 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7889999999999999999999999999999999999999999999987
No 203
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.16 E-value=2.2e-09 Score=102.65 Aligned_cols=143 Identities=18% Similarity=0.143 Sum_probs=114.3
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~ 203 (461)
.+.+.+|.++.+.|++.+.+.++..++++..+++.||+++|+++..+.. .++..++.++. ++++..++..++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~--~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQ--HSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHH--hHHHHHHHHHHHHHHhh
Confidence 4556689999999999999999999999999999999999998888754 34444455556 77887788888999999
Q ss_pred hchhhHHHHHHHhhcCchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 204 GVALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
+...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ ...|-|..+.+.+...++...
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHH
Confidence 9888888888888766554 79999999999999999999998865 566766666664444444333
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.15 E-value=2.5e-07 Score=88.60 Aligned_cols=275 Identities=11% Similarity=-0.020 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCC-----CchhHHHHHHHHHHHHHHh-HhhhhhhhhhhcchHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGW-----SRSFSGIVQSSFLWGYLVS-PIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----s~~~~~~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
..++.+.+..|+..+..+.. -++++.+.+ +.+.+.++-+...+..++. .++.+++++|++|++++-+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 34444455555544444433 444555544 4478999999888887777 8999999999999999888887
Q ss_pred HHHHHHHHhhcccc--c---------------------------cHHHHHHHHHHHhhhhhchhh-HHHHHHHhhcCchh
Q 012519 173 LWSLATFLTPWAAD--T---------------------------SLLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTE 222 (461)
Q Consensus 173 ~~~i~~~~~~~~~~--~---------------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~ 222 (461)
.+....+++++... + +.|...+..+..-+-...... .-..+++|.++.++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 77777666555410 1 123333444444444444444 77888999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------c-Cch----hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhH
Q 012519 223 RARAVAIAMGGFTSGNAIGLVLSPILMSQ-------A-GIF----GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYE 290 (461)
Q Consensus 223 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~-gwr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (461)
-.|..++...+.++|.++++.+..++.+. . .|. ..+.+.++.+++...+.....++.. ..+.....+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVL-TDPRSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCccccchh
Confidence 99999999999999999999999888732 1 242 2333334343443333333322221 111100000
Q ss_pred HHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccc----cchhh
Q 012519 291 LEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFS 366 (461)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~ 366 (461)
. + .++++.+......++.++++|.++.+++...+++.....+..-.-..+.+.+- ++.+ .|.+.
T Consensus 242 ~-------~----~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~ 309 (472)
T TIGR00769 242 L-------K----EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFS 309 (472)
T ss_pred h-------c----cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH
Confidence 0 0 01112233445678899999999998888888877777776655555665442 3322 22333
Q ss_pred hhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 367 AVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 367 ~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
...++..++..++.+++.+|+|-+
T Consensus 310 ~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 310 TWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 444455555566668888888876
No 205
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.15 E-value=1.2e-09 Score=107.87 Aligned_cols=132 Identities=22% Similarity=0.279 Sum_probs=113.5
Q ss_pred hhhh-hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc-ccccHHHHHHHHH
Q 012519 120 VAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALLAMRA 197 (461)
Q Consensus 120 ~~~~-~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~~r~ 197 (461)
...| .+++.+|.++.+.|+....+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+. ..++.+...+..+
T Consensus 280 ~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 359 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMA 359 (495)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 3444 4555689999999999999999999999999999999999999999988888877655432 1246667777889
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 251 (461)
+.|+|.|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.++
T Consensus 360 l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 360 LLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998999999999999999999999999999999999999988653
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=4.7e-10 Score=106.03 Aligned_cols=119 Identities=14% Similarity=0.118 Sum_probs=97.6
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHH-HHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc--cc-------
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--AD------- 186 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~------- 186 (461)
......|.+.+++|.+..+++.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ..
T Consensus 227 ~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 227 AATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 4444556666669999999999888766 6788999999999999999999998888887776654432 11
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHH
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFT 235 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 235 (461)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2457788888999999999999999999999999999999999887654
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=9.7e-10 Score=119.83 Aligned_cols=149 Identities=15% Similarity=0.117 Sum_probs=118.7
Q ss_pred hhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc--------------
Q 012519 120 VAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA-------------- 184 (461)
Q Consensus 120 ~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-------------- 184 (461)
..+|.+ .+.+|.+..+.|++.+.+.++..++.++.|++.|+.++++.+..+.++.+++.+..++.
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 345554 45579999999999999999999999999999998887776666666555554433321
Q ss_pred ----ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCchhHHH
Q 012519 185 ----ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGIFGPFV 259 (461)
Q Consensus 185 ----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~ 259 (461)
..++.|.++++.++.|++.+...+...+++.+.+|+++||+++|+.+....+|..+|+++++.+.+ ..++...|+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 405 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIIL 405 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 115677788889999999999999999999999999999999999999999999999999998874 456677666
Q ss_pred HHHHHHHHH
Q 012519 260 IFGLSGFLW 268 (461)
Q Consensus 260 ~~~~~~~~~ 268 (461)
+.+++.++.
T Consensus 406 ~~~~~~~~~ 414 (1140)
T PRK06814 406 FIALANLIV 414 (1140)
T ss_pred HHHHHHHHH
Confidence 655544443
No 208
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.15 E-value=1.4e-09 Score=100.03 Aligned_cols=261 Identities=16% Similarity=0.151 Sum_probs=158.2
Q ss_pred HHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcchHHHH-HHHHHHHHHHHHhhccccc
Q 012519 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMA-WGVALWSLATFLTPWAADT 187 (461)
Q Consensus 113 ~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~-~~~~~~~i~~~~~~~~~~~ 187 (461)
+.+..--...+++.+++|++....+.+..+.-+...+.+++.|..+|| |||||.++ .+.+...++.++.+++ .
T Consensus 46 f~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~a--a 123 (498)
T KOG0637|consen 46 FGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYA--A 123 (498)
T ss_pred HHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhH--h
Confidence 333344456777888999999999999999999999999999999994 89887554 4556666777777776 3
Q ss_pred cH-----------------HHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 188 SL-----------------LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR-AVAIAMGGFTSGNAIGLVLSPILM 249 (461)
Q Consensus 188 ~~-----------------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l~ 249 (461)
++ .+++++--+.-++.-.....+-+++.|...++++.+ +++++....++|+.+|..+++++
T Consensus 124 Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~- 202 (498)
T KOG0637|consen 124 DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL- 202 (498)
T ss_pred hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc-
Confidence 32 233444445555666778889999999997766666 99999999999999999988744
Q ss_pred hhcCchhH--HHHHHHHHHHHHHHHH-------HhcCCC------CCCCCCcchh-HHHHHHHhhcCccccCCCCCCCCC
Q 012519 250 SQAGIFGP--FVIFGLSGFLWVLVWL-------SATSST------PDRHPQISKY-ELEYILREKQKPLLMGNKHKPATV 313 (461)
Q Consensus 250 ~~~gwr~~--f~~~~~~~~~~~~~~~-------~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 313 (461)
+|+-. |...-.+-+.+..+-. +...++ ++++++..+. +.+ ....+...
T Consensus 203 ---~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~-------------~~~~~~~~ 266 (498)
T KOG0637|consen 203 ---GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTAR-------------SKSSKLPF 266 (498)
T ss_pred ---CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCccccc-------------ccccCcch
Confidence 54432 2222221111111111 111111 1111100000 000 00000000
Q ss_pred ChhHHHHh--cchhhHHHHHHHHHHHHHHHHHHHhHHHHHHH-hhCCCccc----------------cchhhhhhHHHHH
Q 012519 314 IPPFRRLL--SKMPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------------ASWFSAVPWSVMA 374 (461)
Q Consensus 314 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------------~~~~~~~~~~~~~ 374 (461)
.......+ ..|..+.+++...+.+.+.+.+..|.+.++-+ .|+-++.. -.+=+.+..+...
T Consensus 267 ~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lg 346 (498)
T KOG0637|consen 267 LLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLG 346 (498)
T ss_pred HHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHH
Confidence 00111111 23678889999999999999888877777654 34333221 1223344555566
Q ss_pred HHHHHHHHhhhhHhhcCc
Q 012519 375 FTGYLGGLLSDMLIQRGT 392 (461)
Q Consensus 375 i~~~~~g~l~dr~~~~~~ 392 (461)
+.+.+.-++.+|+|-|++
T Consensus 347 i~S~~~~~l~~~~g~r~~ 364 (498)
T KOG0637|consen 347 IYSLLVEKLSRKFGTRKR 364 (498)
T ss_pred HHHHHHHHHHHhcCcceE
Confidence 777788888899985543
No 209
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.14 E-value=3.6e-09 Score=99.90 Aligned_cols=162 Identities=12% Similarity=0.044 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcc---hHHHH-HHHHHHHHHHH
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG---KIIMA-WGVALWSLATF 179 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr---r~~~~-~~~~~~~i~~~ 179 (461)
+.+..++.......+..-+|.+.++.|.+.. .+...++..+...++ .++++||.+| |+... ...++.++...
T Consensus 197 ~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 197 IGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3333444444444555567777777777754 555555555544444 4777777654 33333 24444444444
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
..++. .+.+..++.-++.|++....++...++.+|.+|++.|+++.|+.+....+|..++|++.+.+.. |-+..|.
T Consensus 273 ~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~ 348 (368)
T TIGR00903 273 ALAFE--LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFT 348 (368)
T ss_pred HHHHc--cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHH
Confidence 55555 4555555556677777777778888999999999999999999999999999999999887773 6777888
Q ss_pred HHHHHHHHHHHHHH
Q 012519 260 IFGLSGFLWVLVWL 273 (461)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (461)
+.+++.++..+..+
T Consensus 349 ~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 349 FLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777666554
No 210
>PRK11043 putative transporter; Provisional
Probab=99.14 E-value=5.9e-09 Score=100.24 Aligned_cols=136 Identities=18% Similarity=0.232 Sum_probs=104.4
Q ss_pred hhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH---hhccccccHHHHHHHH
Q 012519 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL---TPWAADTSLLALLAMR 196 (461)
Q Consensus 120 ~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~~r 196 (461)
...|.+.+++|.+..+.++....+.++..++.+..+++.||+|+|+.+....++.+++.+. ......++++.+++..
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPF 303 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 3456677788999999999988889999999999999999999998766655554444332 2221115666666777
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchh
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 256 (461)
.+.|++.+...+...+...|..| ++||++.++.+.....+..+++.+.+.+.+...-..
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 304 CVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 88899989889988888888875 689999999999888888888888888876433333
No 211
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=4.9e-10 Score=99.83 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=100.3
Q ss_pred HHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHH--HHHHHHHHHhhhhhchhhHHHHHHHhhcCc
Q 012519 143 FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQ 220 (461)
Q Consensus 143 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 220 (461)
..+.-.-|.++.+++.||+|||++|..+.+++++..++...+..+|.. ++..+|++.-. .+.+.+.|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEEEEecCcccch
Confidence 345556788899999999999999999999999999887776334433 34445665533 455678899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 012519 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (461)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 279 (461)
+-|+...|.-+.+.-+|+++.|+++ +.....-..+..+.+.+.++..+...++.-|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999998 43334455666777777777777666664343
No 212
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.11 E-value=6.6e-09 Score=99.02 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=88.7
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHh---hccccccHHHHHHHHHHHh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r~l~G 200 (461)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..+..+.. ... ..+++.+.++-.+.+
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL-DLGFWALVVGVAAFV 298 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHH
Confidence 3456689999999999999999999999999999999999999988887654433222 222 135566555555555
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHH-HHHHHHHHHHHHH
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGG-FTSGNAIGLVLSP 246 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~ 246 (461)
.+.+........++.|..| ++++++.++.... ..+|..+++.+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 299 GCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5556666667777888776 7899999987654 4567777776654
No 213
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.11 E-value=6.5e-09 Score=95.87 Aligned_cols=158 Identities=31% Similarity=0.493 Sum_probs=130.4
Q ss_pred HHHHHHHhhhHhhhhhhhhhcCCCc--hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 012519 109 ALCNADRVVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (461)
Q Consensus 109 ~~~~~~~~~~~~~~~~i~~~~~~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 186 (461)
+....+........+.+..+++.+. .+.++..+.+.++..++.++.|++.||+|||+.+..+.....++.++.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-- 89 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA-- 89 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC--
Confidence 3333555666777888888887666 589999999999999999999999999999998888887766666777777
Q ss_pred cc--HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCc-hhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhh--cCchhHHHH
Q 012519 187 TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMG-GFTSGNAIGLVLSPILMSQ--AGIFGPFVI 260 (461)
Q Consensus 187 ~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~gwr~~f~~ 260 (461)
.+ .+.+++.|+++|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.+
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 55 89999999999999999999999999999987 689999999888 6888999999888777654 579997776
Q ss_pred HHHHHHHH
Q 012519 261 FGLSGFLW 268 (461)
Q Consensus 261 ~~~~~~~~ 268 (461)
........
T Consensus 170 ~~~~~~~~ 177 (338)
T COG0477 170 AALLGLLL 177 (338)
T ss_pred HHHHHHHH
Confidence 66655443
No 214
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.6e-09 Score=93.11 Aligned_cols=160 Identities=14% Similarity=0.090 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH-HH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS-LA 177 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~-i~ 177 (461)
.++..++..+.+..+.....+ -..++++||+|+..++-+.+....-.++.+++.|.++||+|++...+.+..+.. ++
T Consensus 267 w~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 344555555555544433333 345788999999999999998888888999999999999999976666554444 44
Q ss_pred HHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---c
Q 012519 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---I 254 (461)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---w 254 (461)
-....+. ++.=+.+..+.|+............++...|+++.|++.|..+...++|..+-|++++.+.++-| |
T Consensus 345 H~~l~Ft----~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 345 HSGLFFT----FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred hhhHHhh----hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 4443333 33334566788888777766677888899999999999999999999999999999999988655 5
Q ss_pred hhHHHHHHHH
Q 012519 255 FGPFVIFGLS 264 (461)
Q Consensus 255 r~~f~~~~~~ 264 (461)
--.|.+....
T Consensus 421 le~ffl~~~~ 430 (459)
T KOG4686|consen 421 LEAFFLIIGL 430 (459)
T ss_pred HHHHHHHHHH
Confidence 4455544333
No 215
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=2.6e-09 Score=103.59 Aligned_cols=149 Identities=15% Similarity=0.090 Sum_probs=122.1
Q ss_pred HHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 012519 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (461)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 186 (461)
..++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~ 312 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP 312 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh
Confidence 33334444445555556555554334477888889999999999999999999999999999999999999999888832
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
+|.+.+++.-++.|++.+..+....++++|..+. ++.|..++..+....+|..+++.+.+.+.+..|+.
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 4999999999999999999999999999999863 33589999999999999999999999888766543
No 216
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.06 E-value=1.7e-08 Score=98.72 Aligned_cols=140 Identities=16% Similarity=0.039 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHhHhhhhh----hhhh-hcchHHH--HHHHHHHHHHHHHhhcc-------ccccHHHHHHHHHHHhh
Q 012519 136 SGIVQSSFLWGYLVSPIAGGT----LVDY-YGGKIIM--AWGVALWSLATFLTPWA-------ADTSLLALLAMRAVVGL 201 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~g~----l~dr-~Grr~~~--~~~~~~~~i~~~~~~~~-------~~~~~~~l~~~r~l~G~ 201 (461)
.+++.+...+...+.+++..+ +.+| .+.+... .+|+++.+++.+..++. ...|+|+++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 778889898888888888664 4444 2333333 77888888887776641 01689999999999999
Q ss_pred hhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 202 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
|.....|...+++.+..|++.||+++|++.....+|..+++.+.....+..+|...|...++..++..++.++.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777789998988888777766665554
No 217
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=86.83 Aligned_cols=313 Identities=14% Similarity=0.064 Sum_probs=172.2
Q ss_pred HHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHH
Q 012519 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (461)
Q Consensus 113 ~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l 192 (461)
.....-+|..-.+.+.++....++|.+..+..-..++...+.|-++|+-|||+.-+.-++...++++- -.+ ++|-.+
T Consensus 51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhS--pqYkVL 127 (454)
T KOG4332|consen 51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHS--PQYKVL 127 (454)
T ss_pred hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcC--CceEEE
Confidence 33445566777788889999999999998888889999999999999999999765555555444432 234 899999
Q ss_pred HHHHHHHhhhhhchhhHHHHH-HHhhcCchhhhHHHHHHH--------HHHHHHHHHHHHHHHHHHhhc--CchhHHHHH
Q 012519 193 LAMRAVVGLAEGVALPAMNNM-VARWFPQTERARAVAIAM--------GGFTSGNAIGLVLSPILMSQA--GIFGPFVIF 261 (461)
Q Consensus 193 ~~~r~l~G~~~g~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~ 261 (461)
+++|++.|+..+....+.-++ +.|.. ++|+.-.-+.. .+..+=.+++.+.+..+.+.+ |--.+|-..
T Consensus 128 mVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAA 205 (454)
T KOG4332|consen 128 MVGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAA 205 (454)
T ss_pred eehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHH
Confidence 999999999999888887776 45554 34443322222 223333445555556666654 345566544
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHH
Q 012519 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (461)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (461)
+.+..+...+.+.-..|.-.+. .+.+.... ......+.+..++++..+..+..+.-...+
T Consensus 206 acfLaigmAvil~~W~ENygdp-----s~~kdllt---------------qf~gaa~aiaSD~ki~LLG~iqsLFE~smy 265 (454)
T KOG4332|consen 206 ACFLAIGMAVILSSWSENYGDP-----SENKDLLT---------------QFKGAARAIASDEKIALLGAIQSLFEGSMY 265 (454)
T ss_pred HHHHHHHHHHHHhhhhhccCCh-----hhhHHHHH---------------HhhHhHHHHhcchHHHHHHHHHHHHhhhhh
Confidence 4433333333322211111110 00000000 011123345566666666555555555544
Q ss_pred HHH-HhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhc--
Q 012519 342 VIL-SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA-- 418 (461)
Q Consensus 342 ~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 418 (461)
.+. .|.|. +.. +-...--|.+++.+.+..++|+-+..++..|-..+ .-.. ..+.+.....++.+.+...
T Consensus 266 tFVFLWTPa-Lsp--n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve~y--mqivf~vs~a~l~Lpilt~~v 337 (454)
T KOG4332|consen 266 TFVFLWTPA-LSP--NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPK---VESY--MQIVFLVSIAALLLPILTSSV 337 (454)
T ss_pred eeeeeeccc-CCC--CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cchH--HHHHHHHHHHHHHHHHHHhcc
Confidence 443 33332 221 11122346777777677777666655554443322 1111 1111111122222222222
Q ss_pred c---ChhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccc-cccc
Q 012519 419 A---KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQY-SGVL 458 (461)
Q Consensus 419 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~ 458 (461)
. .+....++.+++.-.+.|..++...-+-....|+. |+++
T Consensus 338 sP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti 381 (454)
T KOG4332|consen 338 SPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI 381 (454)
T ss_pred CCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence 1 12333455566666777788887777777777753 5554
No 218
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.01 E-value=2e-07 Score=88.26 Aligned_cols=288 Identities=13% Similarity=-0.002 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCC-CchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGW-SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
...+....++...+.-++....+.+..+..- +---.+...-.-.+..++.++..|.+.||..|.+++..+.+.--++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 3456778888888888888888877777642 333344445555677778889999999999999987776554433222
Q ss_pred Hh----h--ccccc----cHHHHHHH---HHHHhhhhhc-hhhHHHHHHHhhc------CchhhhHHHHHHHHHHHHHHH
Q 012519 180 LT----P--WAADT----SLLALLAM---RAVVGLAEGV-ALPAMNNMVARWF------PQTERARAVAIAMGGFTSGNA 239 (461)
Q Consensus 180 ~~----~--~~~~~----~~~~l~~~---r~l~G~~~g~-~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~ 239 (461)
+. . +...+ +-+....+ -.+.|.-.-. ......++=.||. +++.+.+.++...-.=.+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 21 1 11101 11222222 1222211111 1111222223553 345566777777777778899
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh----cCCCCCCCCCcchhHHHHHHHhhcCccccCCC-------C
Q 012519 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA----TSSTPDRHPQISKYELEYILREKQKPLLMGNK-------H 308 (461)
Q Consensus 240 ~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 308 (461)
++|++.|.+.+..+.+...++.++..++..++=+++ .+..|+-+.+.++++.+...+........... +
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 999999999998898888888777777655532222 22222211111100000000000000000000 0
Q ss_pred CCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHh
Q 012519 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (461)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (461)
.-+....+++..+++|.+... +...+.++...++...+..|+... |+++...|.+-+...+.++.+.++..++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 001122345556666655444 444444445666778888999986 999999999999999999999999999999999
Q ss_pred hc
Q 012519 389 QR 390 (461)
Q Consensus 389 ~~ 390 (461)
..
T Consensus 322 lv 323 (432)
T PF06963_consen 322 LV 323 (432)
T ss_pred ch
Confidence 76
No 219
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.99 E-value=4.6e-07 Score=84.29 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHh
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 216 (461)
+.+.-+-.+...+..+.+.+..+|+..+.=+.++.++..++.++.+++ ++.+.-+++-++.+++.|........+ +.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~tfL~l-t~ 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVTFLSL-TH 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHHHHHH-HH
Confidence 446666677788888888999999886665666777888899999999 999999999999999999888877776 44
Q ss_pred hcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc--hhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
.+++ ..++-++.+.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++.+|.++
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 6653 46788999999999999987766666 564 77888877777666666666665443
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.99 E-value=5.3e-08 Score=87.29 Aligned_cols=178 Identities=16% Similarity=0.120 Sum_probs=137.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhh-cchHHHHHH
Q 012519 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWG 170 (461)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~ 170 (461)
|+++..|.+...+.+-.+ ..+..-.-+|.+..|-|+|..+.|++.+...+.....++....+++|. ++|+..+..
T Consensus 205 w~~~~aW~vtLfmGlqS~----~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSL----LYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred ccCchhHHHHHHHHhhHH----HHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 444445555444444333 334555668999999999999999999999999999999999999964 578888888
Q ss_pred HHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (461)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 249 (461)
.+++.++.+.+.+.+.++++.- -++.|+|.|..++.+..++.+-.+ +++-+.-.++.+....+=..+||.+.|++.
T Consensus 281 ~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 281 LLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred HHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 8888888888877732232222 489999999999999999998875 444566666777777777788999999999
Q ss_pred hhcC-chhHHHHHHHHHHHHHHHHHHhc
Q 012519 250 SQAG-IFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 250 ~~~g-wr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
|..| |+..+...+...+++.+.-+..-
T Consensus 358 Da~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 358 DATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 9775 99999998888888777766653
No 221
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.96 E-value=1.8e-08 Score=98.38 Aligned_cols=153 Identities=14% Similarity=0.139 Sum_probs=122.6
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccc--------cccHHHHHHHHH
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA--------DTSLLALLAMRA 197 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--------~~~~~~l~~~r~ 197 (461)
.+.+|.++.+.|++.....++..++....+++.+|++.|+++.++.++.+++.+...... .++.+.++..-+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 357899999999999999999999999999999999999999999999998876543210 033445666778
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----chhHHHHHHHHHH--HHHH
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-----IFGPFVIFGLSGF--LWVL 270 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-----wr~~f~~~~~~~~--~~~~ 270 (461)
+.+++.+........++.+..|++++|...++..+..++|..+++.+++.+.++.| ++..+....+..+ +..+
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l 439 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPL 439 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHH
Confidence 99999998999999999999999999999999999999999999999999998877 5544444333222 2233
Q ss_pred HHHHhcCC
Q 012519 271 VWLSATSS 278 (461)
Q Consensus 271 ~~~~~~~~ 278 (461)
..++++|+
T Consensus 440 ~~~~llP~ 447 (468)
T TIGR00788 440 PLLHLLPR 447 (468)
T ss_pred HHHHhCCC
Confidence 33346675
No 222
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.96 E-value=7e-08 Score=92.71 Aligned_cols=140 Identities=13% Similarity=0.174 Sum_probs=104.9
Q ss_pred hhhhhhhhhc--CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH
Q 012519 120 VAIVPLSLAH--GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (461)
Q Consensus 120 ~~~~~i~~~~--~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (461)
..++.+.++. +.+....+...+.+..+..++.++.+++.||+++|+++.++.++..+..++..+. ++... +.+-+
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~--~~~~~-~~~l~ 329 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA--GGHVG-LYCLT 329 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc--CChHH-HHHHH
Confidence 3444444443 4444555666777778889999999999999999999999999999888888887 66544 56667
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CchhHHHHHHHH
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIFGLS 264 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------gwr~~f~~~~~~ 264 (461)
+.|++.+..+|..+++..+..+++.+....++..+ .+|..++|++.|.+.|.. +.+..|++..++
T Consensus 330 ~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 330 LCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 88888888999999999999975543333333333 399999999999999954 477777764443
No 223
>PRK11462 putative transporter; Provisional
Probab=98.95 E-value=9e-08 Score=93.40 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=88.0
Q ss_pred CchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHH
Q 012519 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMN 211 (461)
Q Consensus 132 s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 211 (461)
++...+++.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+..+.+.+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677788889999999999999999999998776555544433433333213333445555677888777777777
Q ss_pred HHHHhhcC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 212 NMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 212 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
++++|..+ +++.|..++.......+|..+|+.+++.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78887765 23335666777788999999999999998876665
No 224
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.95 E-value=9.2e-08 Score=91.76 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=96.8
Q ss_pred hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHH-HHHHHHHHHHHhhccccccHHHHHHHHHHHhhhh
Q 012519 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (461)
Q Consensus 125 i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~ 203 (461)
+.+.+|.+..+.+++.....++..++.++.+++.||++++..... +..+..+...........+.+.+++..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 344489999999999999999999999999999999984433322 2222222222222221146677888889999999
Q ss_pred hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012519 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 251 (461)
+...+...++..|.+| +++|.+.++.+....+|..+++.+++.+...
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999986 6889999999999999999999998887654
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=1.1e-07 Score=89.96 Aligned_cols=294 Identities=16% Similarity=0.062 Sum_probs=172.6
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcC
Q 012519 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (461)
Q Consensus 140 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 219 (461)
.++....+.+..++.+.+.|+.|.|+.++++........+..-+ +|-+.++++-.+.|+|.+..|...-.+++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~---~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF---PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh---cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 67778888899999999999999999999999999888777655 578888999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------Cch-h-------HHHH---HHHHHHHHHHHHHHhcCCCC
Q 012519 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--------GIF-G-------PFVI---FGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--------gwr-~-------~f~~---~~~~~~~~~~~~~~~~~~~~ 280 (461)
++.+.+..++.-+....+.++|..+...+...- +-+ . .+.+ .+++..+..+...-.... |
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~-p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL-P 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec-C
Confidence 999999999999999998888876554442211 111 0 1111 111111111111111111 1
Q ss_pred CCCCCcchhHHHHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCc-
Q 012519 281 DRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDL- 359 (461)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~- 359 (461)
.+... .+.+. .+...........+++++|+...+....+..++.........|..+.-....+.
T Consensus 212 ~~~~~---~~~~~------------~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n 276 (461)
T KOG3098|consen 212 SKDVV---NCKSS------------SETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN 276 (461)
T ss_pred ccchh---hhhhh------------ccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc
Confidence 11000 00000 000000111233356677887777776666655555555555555443312221
Q ss_pred --cccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHH--HHHHhccC---------------
Q 012519 360 --RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA--LIGLTAAK--------------- 420 (461)
Q Consensus 360 --~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------------- 420 (461)
...+......+++.+++....+.+.+|.++.+.. ..+.++.++.... +..+....
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~------~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~ 350 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK------PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFT 350 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC------cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccc
Confidence 2234445555666777777777777777665432 2222332222222 22221111
Q ss_pred -hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccc
Q 012519 421 -SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVL 458 (461)
Q Consensus 421 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~ 458 (461)
......+..++.+..-.......+.....+.|+++..+
T Consensus 351 ~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~ 389 (461)
T KOG3098|consen 351 PSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQA 389 (461)
T ss_pred cchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHH
Confidence 12233344444555566666777778888888765543
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.93 E-value=4.2e-09 Score=98.72 Aligned_cols=149 Identities=16% Similarity=0.195 Sum_probs=134.0
Q ss_pred hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhh
Q 012519 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (461)
Q Consensus 125 i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g 204 (461)
-.||++..+...|.....-..+-.+.-++.+++.+|+|+-+++.+++.+..+=.+...+. +|.|+.+-..+++|+..+
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgit~a 474 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGITHA 474 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHHHHH
Confidence 356777777778888788888888899999999999999999999999999999999999 999999999999999999
Q ss_pred chhhHHHHHHHhhcCchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 205 VALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
..|.++.+|+++..||+-|..+.++.+ ...++|-.+|.++||.+.+.+|-|..|.+.++.+++.+++....
T Consensus 475 liWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 475 LIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999985 56789999999999999999999999999998888766655443
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.8e-07 Score=88.51 Aligned_cols=158 Identities=16% Similarity=0.118 Sum_probs=121.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
+.++++...+ ..++........+....++.+ -+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.+
T Consensus 234 ~Nrp~~~~l~---~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 234 KNRPLLLLLL---MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred ccchHHHHHH---HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 3344444443 333333444455555444443 356667777788888888888889999999999999999999999
Q ss_pred HHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCc-------hhhhHHHHHHHHHHHHHHHHHHHHH
Q 012519 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLS 245 (461)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~ 245 (461)
+..++.++..+.+.++.+.+++..++.++|.+...+...++++|..+- ++-|...+......-+|..++..+.
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888556899999999999999999999999999887642 2347788888888889999999888
Q ss_pred HHHHhhcCc
Q 012519 246 PILMSQAGI 254 (461)
Q Consensus 246 ~~l~~~~gw 254 (461)
+++....|+
T Consensus 391 g~~L~~~Gy 399 (467)
T COG2211 391 GWILGAIGY 399 (467)
T ss_pred HHHHHHcCC
Confidence 888776653
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.87 E-value=8.3e-09 Score=93.26 Aligned_cols=163 Identities=18% Similarity=0.159 Sum_probs=128.6
Q ss_pred HHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc--chHHHHHHHHHHHHHHHHhhccccc
Q 012519 111 CNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSLATFLTPWAADT 187 (461)
Q Consensus 111 ~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~ 187 (461)
........-|.++. +.+.+..+..+.|+..--..+.+.++..+.|.++||++ |-.....+++..+..+....++ +
T Consensus 282 ~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~--~ 359 (464)
T KOG3764|consen 282 SNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA--T 359 (464)
T ss_pred ccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh--h
Confidence 33333444555555 56677766679999999999999999999999999999 4344555666666666667778 9
Q ss_pred cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCch------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Q 012519 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (461)
Q Consensus 188 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 261 (461)
++.++++-++..|++.+..............+.+ -.|...++...++.+|..+||.++|.+.+..|++|...+.
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 9999999999999998887777666666666543 3478899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 012519 262 GLSGFLWVLVWLSA 275 (461)
Q Consensus 262 ~~~~~~~~~~~~~~ 275 (461)
++..++-..+...+
T Consensus 440 g~~n~iyapvl~ll 453 (464)
T KOG3764|consen 440 GILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 98888766554443
No 229
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.86 E-value=1.1e-07 Score=93.81 Aligned_cols=139 Identities=16% Similarity=0.047 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHhHhhh----hhhhhhhcchHHHHHHHHHHHHHHHHhhcccc-------ccHHHHHHHHHHHhhhhh
Q 012519 136 SGIVQSSFLWGYLVSPIAG----GTLVDYYGGKIIMAWGVALWSLATFLTPWAAD-------TSLLALLAMRAVVGLAEG 204 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~----g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g 204 (461)
.+++.++..+...+..++. +++.+|++..+.+.+|+++.+++.+..++... -|.++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5667777776666666665 77777777778999999999999888666510 125688889999999999
Q ss_pred chhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------hcCchhHHHHHHHHHHHHHHHHHH
Q 012519 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS----------QAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
...|...+++.+..|++.||+++|++.....+|..++..+...... ..+..+.|...++.+++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888877777777666543211 113567787777766654444443
No 230
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.1e-07 Score=84.81 Aligned_cols=164 Identities=20% Similarity=0.227 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhh-cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
+....++.|+...........++.+.++ .|.+..+.+...+.+..+.++|.++.-++..|+...|.+....++..+-++
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3444555666666666777777766666 788999999999999999999999999999999999999999988888888
Q ss_pred HhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 012519 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (461)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 259 (461)
..++. ++.+.++. -++.|+..+..+|...++..+..| +.....+..-....+|+.+-|.+.|++.|..|-...+.
T Consensus 318 ~~~l~--~g~v~~~~-l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 318 AVALI--GGVVALYA-LFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHh--cChHHHHH-HHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 88888 78655554 477889999999999999999998 44555666666778899999999999999999888887
Q ss_pred HHHHHHHHHH
Q 012519 260 IFGLSGFLWV 269 (461)
Q Consensus 260 ~~~~~~~~~~ 269 (461)
....++.+.+
T Consensus 393 ~~pllc~lyV 402 (422)
T COG0738 393 IVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHH
Confidence 6666665555
No 231
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.82 E-value=8.2e-08 Score=85.11 Aligned_cols=318 Identities=14% Similarity=0.063 Sum_probs=199.0
Q ss_pred hcCCCchhHH-HHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhch
Q 012519 128 AHGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (461)
Q Consensus 128 ~~~~s~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 206 (461)
+.+++..|.. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+...+...+.-+. ++.+.+-+.-++.|...+ .
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g--~sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG--PSVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc--CCchheeeehhhcChHHH-H
Confidence 3455555432 22223344445555666678999999999988888888888888888 999999999999999876 5
Q ss_pred hhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchh--HHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 012519 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (461)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (461)
..+.++++-+.++++++.++.+...+..-.|..+|..++..+++.-.+.. .=.+.-....+.. +...++|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCchhhh
Confidence 67889999999999999999999999999999999999999877543332 2222222222223 33334444442221
Q ss_pred CcchhHHHHHHHhhcCccccCCCCCCC---------CCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 012519 285 QISKYELEYILREKQKPLLMGNKHKPA---------TVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY 355 (461)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (461)
....++ +....+.++. ..+.+. ..+.++.+..+||++..-.+-+.+...+++.+..|....-.+..
T Consensus 191 f~~~~~-~~~v~~~e~~----~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~ 265 (433)
T KOG3810|consen 191 FHRLED-KISVGDLEEM----NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA 265 (433)
T ss_pred hhcccc-cceeccchhc----CccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC
Confidence 111111 0000110000 000000 11234556778898888888888888888888887776666642
Q ss_pred -CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHH
Q 012519 356 -HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (461)
Q Consensus 356 -g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (461)
+-.....|..=++..+.++++.+..|.+.-.+.|+ +..++.++.+..+-.++.+....+.++..+..++...
T Consensus 266 ~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~ 338 (433)
T KOG3810|consen 266 PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRV 338 (433)
T ss_pred CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHh
Confidence 11112245555666677788888888886665555 3566666666666667777777777776666666655
Q ss_pred HHhhhhhch-hHhhhhhcccccccccCC
Q 012519 435 MKSFSHSGF-LVNLQEIAPQYSGVLHGI 461 (461)
Q Consensus 435 ~~~~~~~~~-~~~~~~~~p~~~g~~~gl 461 (461)
.+.+..... .....++..+.-|.+.|+
T Consensus 339 ~y~l~itiA~~~iA~nL~~e~~gLvFGi 366 (433)
T KOG3810|consen 339 IYQLTITIATFQIARNLSSELFGLVFGI 366 (433)
T ss_pred hHhhhhhHHHHHHHHhhhhhhheeeeeh
Confidence 555554433 333344555556666553
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.81 E-value=8.7e-07 Score=81.60 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=127.4
Q ss_pred hhHhhhhhh-hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh-hhcchHHHHHHHHHHHHHHHHhhcc-ccccHHHHH
Q 012519 117 VMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-YYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALL 193 (461)
Q Consensus 117 ~~~~~~~~i-~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~ 193 (461)
+-.+++.++ .+-||.+..+..-+......|..++....|++.. |.++|+...+++....++..+..++ ...+.+.+.
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~ 305 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFR 305 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 334455444 4568999999999999999999999999999988 6788888888888888876664443 226889999
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CchhHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------GIFGPFVIFGL 263 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----------gwr~~f~~~~~ 263 (461)
..-++.|++.|.......+...+...+++-|..+|.+...+.++..+|..+++.+.|.. ++-..|.+-++
T Consensus 306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ 385 (403)
T PF03209_consen 306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAV 385 (403)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887631 35556666666
Q ss_pred HHHHHHHHHHH
Q 012519 264 SGFLWVLVWLS 274 (461)
Q Consensus 264 ~~~~~~~~~~~ 274 (461)
..++.+.+...
T Consensus 386 ll~~a~~ll~~ 396 (403)
T PF03209_consen 386 LLLAALVLLGR 396 (403)
T ss_pred HHHHHHHHHHH
Confidence 65555544443
No 233
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.80 E-value=6.2e-08 Score=91.89 Aligned_cols=113 Identities=15% Similarity=0.083 Sum_probs=87.7
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccc--cHHHHHHHHHHHhh
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT--SLLALLAMRAVVGL 201 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~l~~~r~l~G~ 201 (461)
.+.+.+|.+..+.+++.+...+...++.++.|++.||+|+|+.+..+.....++..+..+...+ +.+.+++.-.+.++
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFF 330 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 4455689999999999999999999999999999999999988887777766666555443112 56665555566666
Q ss_pred hhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHH
Q 012519 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (461)
Q Consensus 202 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 237 (461)
+.|.......+++.+..| +++|.+.|+.+...++|
T Consensus 331 ~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 331 FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666666677788888886 79999999998887776
No 234
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.77 E-value=9.6e-08 Score=91.97 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhh-hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcc---------hHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG---------KIIMA 168 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr---------r~~~~ 168 (461)
..++.++++.+........+....|.+. +-+|.+..+.|++.++..+...+..+++|.++||.-+ |..=.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 4556667777777776667777777654 5689999999999999999999999999999998744 33444
Q ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHH-HhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 169 WGVALWSLATFLTPWAADTSLLALLAMRAV-VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (461)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l-~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 247 (461)
++....+++.+..++....+.+.-+++..+ .++ .|...+..+.-..|.. +++-+..+|+.+....+..+++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 555566666666676632233222222222 222 2333333333344444 5889999999999999999999999999
Q ss_pred HHh---hcCchhHHHHHHHHHHHHHHHHHHhcC
Q 012519 248 LMS---QAGIFGPFVIFGLSGFLWVLVWLSATS 277 (461)
Q Consensus 248 l~~---~~gwr~~f~~~~~~~~~~~~~~~~~~~ 277 (461)
+.. ...||+.|++.+++.++..++..++-.
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 984 236999999999998887766655543
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.74 E-value=9.4e-07 Score=85.17 Aligned_cols=153 Identities=12% Similarity=0.008 Sum_probs=101.1
Q ss_pred hhhHhhhhhhhh-hcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh----ccccccHH
Q 012519 116 VVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP----WAADTSLL 190 (461)
Q Consensus 116 ~~~~~~~~~i~~-~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~----~~~~~~~~ 190 (461)
..+....|.+.+ .+|.+..+.++.......+..++..+.+++.++.++++.+.....+..++.++.. .. .++++
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-~~~~~ 313 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW-PHVWL 313 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc-cccHH
Confidence 344445665544 5689999999998888888888888888877555444443322222222322221 12 14555
Q ss_pred HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 191 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
.++++.++.|+|.+...+......-.- ....+|++.++.+.....+..+++.+++++..+ +=++.|...+++..+...
T Consensus 314 ~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 391 (413)
T PRK15403 314 WSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVV 391 (413)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHH
Confidence 567788888999888877777533211 223479999999999999999999999988766 557777666655554433
Q ss_pred H
Q 012519 271 V 271 (461)
Q Consensus 271 ~ 271 (461)
.
T Consensus 392 ~ 392 (413)
T PRK15403 392 F 392 (413)
T ss_pred H
Confidence 3
No 236
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.72 E-value=4.3e-06 Score=75.37 Aligned_cols=264 Identities=13% Similarity=0.033 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhh-----hhcchHHHHH-H
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAW-G 170 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~ 170 (461)
...-+..+.+.+.+.+.-..... .+|.+.+.-|.|.++.+...-++. .+ ..-+++.++.| |+||||..++ +
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P~-sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-PF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-HH-HHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 34455666677777777777777 889998888888887766543332 22 34678889999 9999985433 3
Q ss_pred HHHHHHHHHHhhcc---------ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHH
Q 012519 171 VALWSLATFLTPWA---------ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (461)
Q Consensus 171 ~~~~~i~~~~~~~~---------~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 241 (461)
..+.+..+.+.+.- ..++...+-..-++.-+..+.-..+.-.+.-....+++-|.+......+.+.|.+++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 33333333332222 113444444455667777787788888888888888888877777766666666666
Q ss_pred HHHHHHHHh-------hcCch---------hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHhhcCccccC
Q 012519 242 LVLSPILMS-------QAGIF---------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMG 305 (461)
Q Consensus 242 ~~~~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (461)
..+.-.+-+ ..+|. ..+++.+.+.++.-.+..+..+|.++... ++
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~---~e---------------- 246 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD---EE---------------- 246 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh---hh----------------
Confidence 544322211 11232 23444555555555555555444433211 00
Q ss_pred CCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhh
Q 012519 306 NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (461)
.+...+...+-++++++-|.+...++.....-.++.+-....+.-+.|. |++..+.++...+. +.-.+..++...
T Consensus 247 ~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~----~plqI~l~~~~g 321 (510)
T KOG3574|consen 247 LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPL----VPLQIALPLYIG 321 (510)
T ss_pred hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeeh----hhHHHhhhhhhe
Confidence 0011111223456788889988888888888888888888888888884 99988877765443 344444444444
Q ss_pred hH
Q 012519 386 ML 387 (461)
Q Consensus 386 r~ 387 (461)
|+
T Consensus 322 k~ 323 (510)
T KOG3574|consen 322 KW 323 (510)
T ss_pred ee
Confidence 44
No 237
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.69 E-value=1.3e-06 Score=85.65 Aligned_cols=140 Identities=16% Similarity=0.013 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhcchHH-------HHHHHHHHHHHHHHh-----hcc---ccccHHHHHHHHHHHh
Q 012519 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-------MAWGVALWSLATFLT-----PWA---ADTSLLALLAMRAVVG 200 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-------~~~~~~~~~i~~~~~-----~~~---~~~~~~~l~~~r~l~G 200 (461)
.+++.+...+...+..++.+++.||+|+|+. +.+|+++.+++.+.. .++ ...++|+++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4667777778888899999999999999873 777777777665432 121 1146788888999999
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------hcCchhHHHHHHHHHHHHHH
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS----------QAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr~~f~~~~~~~~~~~~ 270 (461)
+|.++..+....++.+..|++.++.++|++....++|..+|..++..... .-...+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 11245667767766665555
Q ss_pred HHHHh
Q 012519 271 VWLSA 275 (461)
Q Consensus 271 ~~~~~ 275 (461)
+.+..
T Consensus 471 ~~~~~ 475 (489)
T PRK10207 471 VMALM 475 (489)
T ss_pred HHHHH
Confidence 44443
No 238
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.67 E-value=1.2e-07 Score=66.76 Aligned_cols=80 Identities=20% Similarity=0.196 Sum_probs=73.9
Q ss_pred HHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHH
Q 012519 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (461)
Q Consensus 111 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 190 (461)
.+..++.+.+.+|.+++|.++|.++.|++.+...+|+.+|++...++.++..+++.+..+++...+..+.+++. ++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchH
Confidence 35678899999999999999999999999999999999999999999999889999999999999999999998 7766
Q ss_pred HH
Q 012519 191 AL 192 (461)
Q Consensus 191 ~l 192 (461)
..
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.67 E-value=2.5e-06 Score=68.79 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhc
Q 012519 139 VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (461)
Q Consensus 139 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 218 (461)
-.++......+..++.+.+.+++|.|+.++++.+...+-.... +- ++.+.++.+-++.|++.+..|++.-.++.+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FY--PNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 3455566677788888999999999999999999998665554 34 78899999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 219 PQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (461)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 249 (461)
++++|++..++.-.....+.++|.++.-.+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888887665553
No 240
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.63 E-value=1.2e-07 Score=87.50 Aligned_cols=176 Identities=15% Similarity=0.035 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHH--------HHH-HHHHHHHHhHhhhhhhhhhhcchHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGI--------VQS-SFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~--------~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 169 (461)
+.+...+..+|+.-...+..+.....+.+.+++.+.+... ... +..+++..+-.+...++|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5666677777776666667777777888877765554333 111 2223333466667889999999999999
Q ss_pred HHHHHHHHHHHhhcccccc----HH----HHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHH
Q 012519 170 GVALWSLATFLTPWAADTS----LL----ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (461)
Q Consensus 170 ~~~~~~i~~~~~~~~~~~~----~~----~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 241 (461)
+.+++.+..+..+.. .| -. ...+..++.-+| .......+-+|.+|.+-|+.+-|+..+..-+|+++|
T Consensus 384 GF~~~~i~~~~~~~~--y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg 458 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGP--YNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVG 458 (538)
T ss_pred hHHHHHHHHHHHcCC--cccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHH
Confidence 999999999988887 44 11 222333444443 233445567899999999999999999999999999
Q ss_pred HHHHHHHHh-----hcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 242 LVLSPILMS-----QAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 242 ~~~~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
......+.+ ..+.|+.|++.+.++++..+..+++ ||+.
T Consensus 459 ~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 459 AFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred HHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 999999988 7789999999999998877766665 4443
No 241
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.63 E-value=0.0002 Score=69.36 Aligned_cols=281 Identities=11% Similarity=-0.005 Sum_probs=164.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
..+..+..+.+..++..+.....-..-..+.-+-. .++.+..+-....+ ...+...+..++++++++.+++-+....+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~-gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ-GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 33455566666666666655444443333222212 67777777665555 44556778899999999999888877777
Q ss_pred HHHHHHhhccc-------ccc----------------------HHHHHHHHHHHhhhhhchhh-HHHHHHHhhcCchhhh
Q 012519 175 SLATFLTPWAA-------DTS----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTERA 224 (461)
Q Consensus 175 ~i~~~~~~~~~-------~~~----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~ 224 (461)
.....++++.- +++ .|.+.+..++.-+-.....+ .-..+..|.++.++-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 76666655530 111 11122222222222222222 4577889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---------hcCchhHHHHHH----HHHHHHHHHHHHhcCCCCCCCCCcchhHH
Q 012519 225 RAVAIAMGGFTSGNAIGLVLSPILMS---------QAGIFGPFVIFG----LSGFLWVLVWLSATSSTPDRHPQISKYEL 291 (461)
Q Consensus 225 ~~~~~~~~~~~~G~~~g~~~~~~l~~---------~~gwr~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (461)
+..++...+.++|.+++..+..++.+ ...|...+.... +.+++.........++..++.... +...
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~ 258 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAK 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhh
Confidence 99999999999999999999988887 123554332221 122222222222211111111100 0000
Q ss_pred HHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccc----cchhhh
Q 012519 292 EYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSA 367 (461)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~ 367 (461)
..++.+.+......++.++++|.+..+++...+++.....+....-..+++.+. ++.+ .|....
T Consensus 259 -----------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~ 326 (491)
T PF03219_consen 259 -----------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSS 326 (491)
T ss_pred -----------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHH
Confidence 011222233345677888999999999998888888888777766666666543 3322 233444
Q ss_pred hhHHHHHHHHHHHHHhhhhHhhc
Q 012519 368 VPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
..++..++..++++.+.+|+|.+
T Consensus 327 ~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 327 WTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHH
Confidence 55556666667788888888876
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.62 E-value=3.7e-07 Score=85.97 Aligned_cols=137 Identities=8% Similarity=0.024 Sum_probs=103.4
Q ss_pred ChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcc
Q 012519 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (461)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (461)
+.+..+++.++....+.+...+..++...+.+++=-++++. +-.+..-|........+.++.-++.+++.+|+|+-+
T Consensus 361 ~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~-- 437 (618)
T KOG3762|consen 361 LADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN-- 437 (618)
T ss_pred HHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc--
Confidence 33444678888877777777788888888888887888885 656666676666667777888889999999999873
Q ss_pred hhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccC
Q 012519 394 VTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g 460 (461)
++..++.+...=++.+....++|..+..-++-+...+..+....+++..+.|. .+.++.|
T Consensus 438 -------v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 438 -------VMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred -------eeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 44566666666667777778888888888888888888888888899988874 4655544
No 243
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.62 E-value=7.3e-06 Score=79.22 Aligned_cols=142 Identities=12% Similarity=0.001 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhcc-hHHHHHHHHHHHHHHHHhhcccccc---------------------HHHHHHH
Q 012519 138 IVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLTPWAADTS---------------------LLALLAM 195 (461)
Q Consensus 138 ~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~~~~---------------------~~~l~~~ 195 (461)
|....+.+...+.+++..++.+|+|+ |++..++.++.+++.+...+. ++ .+..++.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLV--TYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH--HhhhhccccccccccccCcchhhHHHHHHH
Confidence 44455666666777888999999994 777799988888887776654 22 3777888
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcCc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--chhHHHHHHHHHHHHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFPQ--TERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--IFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~ 271 (461)
-.+.|+..+..+..-++++++..++ ++.|..+|+.+.+..+.+++..+..|.+.+.+| -.+.+.+.++..++..++
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHH
Confidence 8999999999999999999999985 456999999999999999999988888666555 667888889999999999
Q ss_pred HHHhcCCCCC
Q 012519 272 WLSATSSTPD 281 (461)
Q Consensus 272 ~~~~~~~~~~ 281 (461)
.++.+|+++.
T Consensus 467 ~~~~~~~~~~ 476 (477)
T TIGR01301 467 ALILLPRPRV 476 (477)
T ss_pred HHHhCCCCCC
Confidence 8888887653
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.59 E-value=3.9e-10 Score=110.28 Aligned_cols=163 Identities=16% Similarity=0.181 Sum_probs=112.2
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh--c-c-ccc----c
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--W-A-ADT----S 188 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~-~-~~~----~ 188 (461)
......+.+.+..+.+.. -+......+...++.++...+.||+|||+.++.+..+.+++.+..+ . . ... +
T Consensus 271 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344455777777777666 2222334455556777778999999999999999999888877664 1 1 111 2
Q ss_pred HHHHHHHHHH-HhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 012519 189 LLALLAMRAV-VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 189 ~~~l~~~r~l-~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 267 (461)
+..+...... .+++. +..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...|++.+.++++
T Consensus 349 ~~~i~~~~l~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccceeeeeccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 2222222221 12222 344666688899999999999999999999999999998888887766634566677777777
Q ss_pred HHHHHHHhcCCCCCC
Q 012519 268 WVLVWLSATSSTPDR 282 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~ 282 (461)
..+..+++.||+..+
T Consensus 428 ~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 428 AIIFVYFFLPETKGK 442 (451)
T ss_pred HHhheeEEEeeCCCC
Confidence 777777888887543
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.51 E-value=1.1e-06 Score=85.16 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=89.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhH-hhcCcchhhhHHHH
Q 012519 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTSVTLTRKIL 401 (461)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-~~~~~~~~~~~~~~ 401 (461)
.+.++.++...+...+.++++..++|.|+++.+|++..+++.+.....+...++.+++|+++||+ ||| | .
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-------r--~ 78 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-------M--A 78 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-------H--H
Confidence 34567777788888889999999999999998899999999999999999999999999999999 887 2 3
Q ss_pred HHHhhHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc---ccccccC
Q 012519 402 QSIGFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ---YSGVLHG 460 (461)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~g 460 (461)
+.++.+..+++.+++.... ........+.+...+.+...+...++..|.+|+ +|+++.|
T Consensus 79 iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~ 141 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFS 141 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceeh
Confidence 3344444444433333221 112122222223333455556667788898874 4666554
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=7e-06 Score=81.54 Aligned_cols=181 Identities=16% Similarity=0.091 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+..+.+..+.............+.+-+..+.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.+
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 333444444444444445555566777777766544 5555666777777888889999999999999999999999988
Q ss_pred Hhhcccc--c---------cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 180 LTPWAAD--T---------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 180 ~~~~~~~--~---------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
+.+.... . .+..+...-+..........+....+.+|.+|.+-|+++.++......+...+-......+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765410 0 1122222223333333334556667889999999999999998877777665554444445
Q ss_pred HhhcCchhHHHHHHHHHHHHHH-HHHHhcCCCCC
Q 012519 249 MSQAGIFGPFVIFGLSGFLWVL-VWLSATSSTPD 281 (461)
Q Consensus 249 ~~~~gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~ 281 (461)
.+..++...|...+..+.+..+ +.+++.||+..
T Consensus 455 ~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 455 TEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 4444456777777777776666 67777777653
No 247
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.47 E-value=1.4e-05 Score=78.58 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhh-hcCCCc---hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchH-HHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSL-AHGWSR---SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWS 175 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~---~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~ 175 (461)
+.+..+..++.++.........|.... -|+-+. ...++....+.++..+++.+.|.+..+++|-| .++++.++..
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 344444555555555555556665443 344333 35788888899999999999999999887655 5567776766
Q ss_pred HHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
++..+.+....+|....+..-++.|+|.|...........-..|+++.|.+.++..+...+|+.+|..+...+
T Consensus 392 a~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 392 AFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 6555554443356666678889999999988888888888888999999999999999999999998776544
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=98.46 E-value=9.2e-06 Score=80.34 Aligned_cols=174 Identities=11% Similarity=0.009 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhhhhhhc-CC-CchhHHH-HHHHHHHHHHHhHhhhhhhhhh---------hcchHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVPLSLAH-GW-SRSFSGI-VQSSFLWGYLVSPIAGGTLVDY---------YGGKII 166 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~-s~~~~~~-~~s~~~~~~~~~~~~~g~l~dr---------~Grr~~ 166 (461)
.-++++++..++.......+..-+.+|.+.+ |. .+.+... +++++.++..+|-+..|.+... +.|--.
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~ 432 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIA 432 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHH
Confidence 3445556666665555556666677788888 65 2232233 7888889999999888887721 212223
Q ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHH-HHHH
Q 012519 167 MAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG-LVLS 245 (461)
Q Consensus 167 ~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g-~~~~ 245 (461)
+.+..+ +.++.++.++. -....+++.-++.|++.|..++.....++|.|- |+-|+-..+......+|..+- ..+.
T Consensus 433 l~~~~~-~~~~~lll~~~--~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~ 508 (591)
T PTZ00207 433 LFIPSV-CIITMLTLFLT--LPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLY 508 (591)
T ss_pred HHHHHH-HHHHHHHHHHH--CCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHH
Confidence 444444 66667766666 333689999999999999999999999999998 999999999999999998776 5667
Q ss_pred HHHHhhc----------C---chhHHHHHHHHHHHHHHHHHHhc
Q 012519 246 PILMSQA----------G---IFGPFVIFGLSGFLWVLVWLSAT 276 (461)
Q Consensus 246 ~~l~~~~----------g---wr~~f~~~~~~~~~~~~~~~~~~ 276 (461)
|.+.|+- | .|.+|++.+.++++..+....+.
T Consensus 509 G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 509 GEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 7776531 2 78899999988888777665543
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.39 E-value=1.7e-06 Score=83.74 Aligned_cols=164 Identities=13% Similarity=0.053 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhhhhhhh-cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh----hcchHHHHHHHH
Q 012519 98 VKVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMAWGVA 172 (461)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~ 172 (461)
-..++..++..++.....+.+...+|.+.++ .|.+..+.+.+...+.++.+++.+++|+++|| ..+|......+.
T Consensus 272 dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 272 DPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred chhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3455667777777777777788888888887 56899999999999999999999999999999 677776666666
Q ss_pred HHHHHH-HHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchh-hhHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 012519 173 LWSLAT-FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLV-LSPILM 249 (461)
Q Consensus 173 ~~~i~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~-~~~~l~ 249 (461)
+..+.. +..... ++......+-+..+.+.....+.....+.+...++. |-...+....+.+.+..++|. .-+...
T Consensus 352 ~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 352 LYAIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred HHHHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 665544 444444 445555554455555566667777788888775443 444445555555555544444 334444
Q ss_pred hhcCchhHHHHHHH
Q 012519 250 SQAGIFGPFVIFGL 263 (461)
Q Consensus 250 ~~~gwr~~f~~~~~ 263 (461)
..++|-+.|+....
T Consensus 430 p~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 430 PRYGWGAVFYMLVA 443 (495)
T ss_pred cchhhhhHHHHHHH
Confidence 55788888854333
No 250
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.39 E-value=2.6e-06 Score=59.70 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHH
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 174 (461)
+-..+++.+.......|.++...++.|+|+.++|.+.++..+...++++++|.++||+|+++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666666677788888888899999999999999999999999999999999999998877765543
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.28 E-value=1.6e-05 Score=75.52 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccc-cc------HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCch---hhhHHHHHHHHHH
Q 012519 165 IIMAWGVALWSLATFLTPWAAD-TS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGF 234 (461)
Q Consensus 165 ~~~~~~~~~~~i~~~~~~~~~~-~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 234 (461)
|+++++.++..+|.++..++.. +. .+.++++-++.++|.|+.-+...++.+|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 6788899999999888444311 22 367899999999999999999999999999765 5788999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 235 ~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
++|..++..+.+++-++.||.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998888776665544
No 252
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.23 E-value=2.2e-05 Score=71.16 Aligned_cols=123 Identities=20% Similarity=0.203 Sum_probs=111.9
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc--chHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhh
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~ 203 (461)
.+.||.++.|.|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++.+.+ .....++.+-.+--+..
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~--~~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA--RTPVVLYLGSTLKSFST 366 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc--ccchhhhHHHHHHHHHH
Confidence 3789999999999999999999999999999999988 7778888888888788888888 88888999999999999
Q ss_pred hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
+...+....++....|.++||.++|+......++-++||+++|.+..
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 98899999999999999999999999999999999999999988765
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.21 E-value=0.00015 Score=72.42 Aligned_cols=159 Identities=15% Similarity=0.107 Sum_probs=111.2
Q ss_pred hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccH-HHHHHHHHHHh
Q 012519 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL-LALLAMRAVVG 200 (461)
Q Consensus 122 ~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~~r~l~G 200 (461)
+......+|.+......+.. ..........+...|++|||..+..+..+..++.++.++...... +...+...+..
T Consensus 341 l~~~~~~lg~~~~~~~~~~~---~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIYLNFTLSG---LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHHHHHHHHH---HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 33344445544433333333 344555555589999999999999999999999999988832222 24555666666
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
++.+..+.....+.+|.+|...|+.+.+..+....+|.+++|.+...... ......+.+.+..+.+..++...+.||+.
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 66677777789999999999999999999999999999999988765544 22222333346666666666667777776
Q ss_pred CCCC
Q 012519 281 DRHP 284 (461)
Q Consensus 281 ~~~~ 284 (461)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 5543
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.20 E-value=7.1e-05 Score=72.08 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=112.4
Q ss_pred hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhh-hhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHh
Q 012519 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (461)
Q Consensus 122 ~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (461)
.-.+...++++..+.+...+...+...+++++.. .+...+|-|+++..|++.-.+...+.+++ ++.|+++...++.+
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--TETWMMFAAGVVVA 342 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--ccchhhhHHHHHHH
Confidence 4456678999999999888888888888888877 77788999999999999999999999999 99999999988888
Q ss_pred hhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 201 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
+. ....++..+.++.+..++++|+++++......+..+++|.+-+.+..
T Consensus 343 ~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 343 LA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 76 55789999999999999999999999999999999999998887754
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.17 E-value=0.00031 Score=66.44 Aligned_cols=282 Identities=10% Similarity=-0.015 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhhhh--cCCCchhHHHHHHHHHHHHHHhHhhhhhhhh-----hhcchHHHHH-HHHH
Q 012519 102 SMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAW-GVAL 173 (461)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~~ 173 (461)
.++.+.+++.+.-.+.....+|.+.++ -+.+.+|.+...-+ ...+. .-+++.++.| |+||||..++ .-.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 345566777766655555567888877 67788887755321 11221 3455556655 8999986544 3333
Q ss_pred HHHHHHHhhccc-----------------c---cc--HHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHH
Q 012519 174 WSLATFLTPWAA-----------------D---TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM 231 (461)
Q Consensus 174 ~~i~~~~~~~~~-----------------~---~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 231 (461)
.++..+..+... . ++ ...+....++.=+-.+.-..++-.+.-....+++++.|..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 333333322210 0 01 1122233333333445555666666666777788777776666
Q ss_pred HHHHHHHHHHHHHHHHHHhh-c---Cch------------hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHH
Q 012519 232 GGFTSGNAIGLVLSPILMSQ-A---GIF------------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (461)
Q Consensus 232 ~~~~~G~~~g~~~~~~l~~~-~---gwr------------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (461)
.+.++|..++-.+.-.+-+. + -+| .-..+.+.+.++.-+...++.+|.|......+.+..+...
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 66666666655444333210 0 011 1223344444455555566666655332111111000000
Q ss_pred HhhcCc--cccCCC----CC---CCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhh
Q 012519 296 REKQKP--LLMGNK----HK---PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFS 366 (461)
Q Consensus 296 ~~~~~~--~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 366 (461)
++.++. ...+.. ++ -+.....+.+++|-|++..+.+..+..-.++.+...-...=+.+ .|++.++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~ 319 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV 319 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH
Confidence 000000 000000 00 11122334567788999988888888888877777666666777 499988776554
Q ss_pred hhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 367 AVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 367 ~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
. ..+...++.|+++.|+-+.
T Consensus 320 l----i~~P~qii~~~~~~Kws~g 339 (544)
T PF13000_consen 320 L----IDFPFQIILPYYIGKWSAG 339 (544)
T ss_pred H----HhhhHHHHHHHHhhhhhcC
Confidence 3 3566666777776666543
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.07 E-value=2e-05 Score=55.25 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+-..+++.+.+...+..++|.|+++ .|+++.+.|.+.++..+..+++.++.|.++||.+++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 44566778888888999999999998 599999999999999999999999999999999988
No 257
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.04 E-value=3.8e-05 Score=72.89 Aligned_cols=108 Identities=10% Similarity=-0.097 Sum_probs=79.9
Q ss_pred HHHhHHHHHHHhhCCCccc-cchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccCh
Q 012519 343 ILSWMPIYFNFVYHIDLRQ-ASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (461)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (461)
...+...++.+.+|++..+ .|.+...+..+..+..+.+|+++||+|.| .++..+.+.-++..++..+.++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666678999999 99999999999999999999999999988 3445555555555555555555
Q ss_pred hHHHHHHHHHHHHHHhhhhhchhHhhhhhcc-cccccccC
Q 012519 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (461)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g 460 (461)
.....+.-++.+.+.+... ....++...+| ++|++++|
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~rats 153 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAA 153 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHH
Confidence 6555556566666666666 77777777776 56888765
No 258
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.02 E-value=0.014 Score=55.37 Aligned_cols=279 Identities=10% Similarity=-0.013 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhc---CCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAH---GWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
.+..++.+.+..++..+.....-. +.+.+ ...++.+.++-+..-+ +..+..++.+++.+++.+.+++-+.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 445555556666655554444433 34444 3457778888888888 678889999999999999999988888
Q ss_pred HHHHHHHHhhccc-------ccc-----------------------HHHHHHHHHHHhhhhhchhh-HHHHHHHhhcCch
Q 012519 173 LWSLATFLTPWAA-------DTS-----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQT 221 (461)
Q Consensus 173 ~~~i~~~~~~~~~-------~~~-----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~ 221 (461)
.+....+++++.- +++ .|..-+..++.=+=...... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 8888777777651 112 12222222222222222222 4556678899889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----------chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHH
Q 012519 222 ERARAVAIAMGGFTSGNAIGLVLSPILMSQAG----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYEL 291 (461)
Q Consensus 222 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (461)
+-.|..++++.+.+++..++..+..++..+.. -+..+.+.+..+++...+..+.-+...++.....+...
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 99999999999999999999988888866321 23344444444444444444432222222111100000
Q ss_pred HHHHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCcccc---chhhhh
Q 012519 292 EYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQA---SWFSAV 368 (461)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---~~~~~~ 368 (461)
+ .+..+.+......++.+.|+|.++.+.+...+++.....+....-.-.++.+-...+.. |.+...
T Consensus 261 -------k----k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~ 329 (509)
T COG3202 261 -------K----KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIW 329 (509)
T ss_pred -------c----cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHH
Confidence 0 00112222334567788888998888888888887777765444343444333222222 223333
Q ss_pred hHHH-HHHHHHHHHHhhhhHhhc
Q 012519 369 PWSV-MAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 369 ~~~~-~~i~~~~~g~l~dr~~~~ 390 (461)
.++. .++...+++.+.+|.|-.
T Consensus 330 tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 330 TGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHhhhHHHHHHhhHH
Confidence 3333 344556777777777754
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.95 E-value=0.0007 Score=63.41 Aligned_cols=116 Identities=12% Similarity=0.015 Sum_probs=83.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH---HHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 129 HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL---ATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 129 ~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i---~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
+.-...+..+...+|.+|..++.--...+ |+-+-+.+.+-..+..+ ...+.-+. ++.|.+++.-+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhH
Confidence 33346778888888888877764433222 33222222222222222 22234445 8899999999999999999
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
.+......+.|-.++++|..++|....+-++|..++.+++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887655
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.74 E-value=0.0015 Score=62.01 Aligned_cols=142 Identities=16% Similarity=0.080 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHHHhHhhhhhhhhhhcch-------HHHHHHHHHHHHHHHHhhcc--------ccccHHHHHHHHHH
Q 012519 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK-------IIMAWGVALWSLATFLTPWA--------ADTSLLALLAMRAV 198 (461)
Q Consensus 134 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~--------~~~~~~~l~~~r~l 198 (461)
-..+|..+...+...+.+++..++-.+.++| .=+-+++.+.+.+.++.... ...+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 4557888888888999999988888885554 23445555555555543322 12478999999999
Q ss_pred HhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHH------HHhhcCchhHHHHHHHHHHHHHHHH
Q 012519 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI------LMSQAGIFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 199 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (461)
+++|.=+..|...++++...|+.-.+.+++.+......|..++..+++. ..+...-...|+..+...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988887773 3334455667777777777666554
Q ss_pred HHh
Q 012519 273 LSA 275 (461)
Q Consensus 273 ~~~ 275 (461)
+..
T Consensus 484 ~~~ 486 (498)
T COG3104 484 LLL 486 (498)
T ss_pred HHh
Confidence 444
No 261
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.74 E-value=0.007 Score=54.14 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=52.3
Q ss_pred HHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhc
Q 012519 146 GYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (461)
Q Consensus 146 ~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 218 (461)
..+...++.+.+..++|-|++++++...........- - +.+..++-...+.|+|.+..+..--+|+++.-
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl-~--pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL-E--PRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc-c--hhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3344555555899999999999998888776544332 2 67888999999999999988877666665543
No 262
>PRK03612 spermidine synthase; Provisional
Probab=97.74 E-value=0.003 Score=62.34 Aligned_cols=142 Identities=20% Similarity=0.205 Sum_probs=87.0
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHH---HHH-HHhhccc-cccH-HHHHHHHHHH
Q 012519 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LAT-FLTPWAA-DTSL-LALLAMRAVV 199 (461)
Q Consensus 126 ~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~-~~~~~~~-~~~~-~~l~~~r~l~ 199 (461)
.--+|.+..+.+.+.+++.+|.++|+.+++++.++.-++.. .+-+.+.. ++. ++..... ...+ ..++..-++.
T Consensus 42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33468888899999999999999999999988744333322 11111111 111 1111110 0111 2233445567
Q ss_pred hhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCchhHHHHHHHHHHHHH
Q 012519 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWV 269 (461)
Q Consensus 200 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~ 269 (461)
|+..|+..|....+..+.. .++-+...|-......+|.++|+++.+++. ..+|-....++.+.+.++..
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 7888888887777666543 234567788899999999999999988764 46775444444444444433
No 263
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.72 E-value=8e-05 Score=69.51 Aligned_cols=124 Identities=12% Similarity=0.035 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhH
Q 012519 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (461)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (461)
.+++...+...--+.+-..++. .++.+|.+....|++...+.+...+..+++|++.||+.|+ .++.++..
T Consensus 37 il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~vG~~ 106 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAVGIF 106 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEeeHHH
Confidence 3444444444444444443332 3445899999999999999999999999999999999988 34455555
Q ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccccCC
Q 012519 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGI 461 (461)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gl 461 (461)
+-.++.++..+....|...++=.+.+.+.....+...+.++|.+|+ +|++++|+
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 5555555555556666666666667777777788999999999996 59887764
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.64 E-value=0.0014 Score=64.99 Aligned_cols=159 Identities=18% Similarity=0.117 Sum_probs=126.2
Q ss_pred hhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHHHHHHHHHHHHHHhhcc-------cc--
Q 012519 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLTPWA-------AD-- 186 (461)
Q Consensus 117 ~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~-------~~-- 186 (461)
.....+..+..+++.+...+.-..+.+.-......+..+.++|- +||-+++.++.++..++.++..+. +.
T Consensus 56 ~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred chhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 34667788888999888888888889988889999999999996 589999999999998886554332 00
Q ss_pred -----------cc---HHHHHHHHHHHhhhhhchhhHHHHHHHhhcC---c-hh--hhHHHHHHHHHHHHHHHHHHHHHH
Q 012519 187 -----------TS---LLALLAMRAVVGLAEGVALPAMNNMVARWFP---Q-TE--RARAVAIAMGGFTSGNAIGLVLSP 246 (461)
Q Consensus 187 -----------~~---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~-~~--r~~~~~~~~~~~~~G~~~g~~~~~ 246 (461)
++ ...++.+.-+..+|.|+.-+...++-+|-++ + ++ +...+.++....++|..++..+..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 01 2356677778888999999999999999997 2 22 347888999999999999988888
Q ss_pred HHHhhcCchhHHHHHHHHHHHHHHHHHHh
Q 012519 247 ILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 247 ~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
+.=++.+|.+.|.+..+...+..++.+..
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 87778899999999888777766655543
No 265
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.53 E-value=0.00039 Score=60.98 Aligned_cols=114 Identities=19% Similarity=0.122 Sum_probs=69.0
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
....|.+..|.|..- +.+|+|..+...+.....++..+ .++.|.+.|++|.+ ..+.++.+...++....
T Consensus 15 ~Gt~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLL 83 (250)
T ss_pred cCcccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH---------HHHHHHHHHHHHHHHHH
Confidence 334566666666655 45899999999888888888876 48889999999987 34444444444443322
Q ss_pred h--ccC-----hhHHHHHHHHHHHHHHhhhhhchhHhhhhhcccccccccCC
Q 012519 417 T--AAK-----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGI 461 (461)
Q Consensus 417 ~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 461 (461)
. ... +.+......+++................+.+|++||++.|+
T Consensus 84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgi 135 (250)
T PF06813_consen 84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGI 135 (250)
T ss_pred HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehh
Confidence 2 221 22222222222322223333344444556779999999875
No 266
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.49 E-value=0.00025 Score=56.50 Aligned_cols=88 Identities=16% Similarity=0.038 Sum_probs=56.8
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhch
Q 012519 364 WFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGF 443 (461)
Q Consensus 364 ~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (461)
++.+...++..++.++.|++.||++|| + ....+.....+..+.....++.+......++.+...+...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 72 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRK-------P--VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAG 72 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchh-------H--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhH
Confidence 345566778899999999999999988 2 2233333444444444444555555555555555666666777
Q ss_pred hHhhhhhccc-ccccccC
Q 012519 444 LVNLQEIAPQ-YSGVLHG 460 (461)
Q Consensus 444 ~~~~~~~~p~-~~g~~~g 460 (461)
.....|..|+ +++++.|
T Consensus 73 ~~~~~~~~~~~~~~~~~~ 90 (141)
T TIGR00880 73 AALIADIYPPEERGVALG 90 (141)
T ss_pred HHHHHHHCChhhhhHHHH
Confidence 7888888874 5776654
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.47 E-value=0.0027 Score=55.04 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=57.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH---Hh--hcCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHH
Q 012519 221 TERARAVAIAMGGFTSGNAIGLVLSPIL---MS--QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (461)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (461)
|+|+....+...++++|.++.-..--.- .+ ..+|++.+.+.+++.++.+++..++-.+-....++ ++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~----- 75 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQE----- 75 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccc-----
Confidence 4566666666777788877654332111 11 23599999999988887777666653321111111 0000
Q ss_pred HhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHH
Q 012519 296 REKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (461)
+.+..........+.+|++..|...+.+...
T Consensus 76 ----------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 76 ----------KENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred ----------cccccccccchHHHHHccchHHHHHHHHHHH
Confidence 1111222335678999999998877655543
No 268
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.40 E-value=0.0011 Score=58.62 Aligned_cols=139 Identities=17% Similarity=0.161 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHH
Q 012519 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 215 (461)
.|.+.-+-.+...+..+.+....||+---.=+.+..++.+.+.++.+++ ++.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 4555556667777778888888888653333445566778888899999 99999888888888888866555444433
Q ss_pred hhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCchhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012519 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--AGIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (461)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (461)
. ++ ....+.++.+.+.++++|..--..+.+. +.-|.+.++...+.++.+...++.+++++.
T Consensus 142 ~-Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 142 R-YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred c-CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 3 32 2455667777777788887766666653 447888888877777767666666655443
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.39 E-value=0.014 Score=55.84 Aligned_cols=148 Identities=19% Similarity=0.119 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 180 (461)
++...++..+-++....++..+..+...-|+++..+|..-+...+....+.+...++.+|+|..|.=+++...-.++..+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 44445555555555555566666666666999999999999999999999999999999999888777766644433332
Q ss_pred hh---cccc-c----cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 181 TP---WAAD-T----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 181 ~~---~~~~-~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
+. +.+. + +...++.+-++.=+|.=+..-...-++.|..|+++||...|.-.+..++--++-..++-.+
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 1211 2 3334444444444554466778888999999999999999999999988877766655433
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.37 E-value=0.0048 Score=57.48 Aligned_cols=122 Identities=13% Similarity=-0.005 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHH----HHhHhhhhhhhhhhcchHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGY----LVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~----~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 175 (461)
.....++..+-....+..+..+.+++.+++-.+.. .......+.+.. .+....-..+.-|. |+++.........
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~i 96 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAI 96 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 33444444444555666777777888877744433 333333333333 33444444444452 2222111111111
Q ss_pred HHHHHhhcc-------ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhh
Q 012519 176 LATFLTPWA-------ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERA 224 (461)
Q Consensus 176 i~~~~~~~~-------~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~ 224 (461)
+..+.+.++ ....++..++.-++.|++.|..+...+...++. |+|.-+
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytq 151 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQ 151 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHH
Confidence 111112221 123466677777888899888888877777766 555433
No 271
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.35 E-value=0.00063 Score=63.52 Aligned_cols=175 Identities=11% Similarity=0.033 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhc-chHHHHHHHHHHHHHHHHhh
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~ 182 (461)
+.+.+.......+.....+....+.-|.+....|++.....++.++++...|.+.||.. .|.++++......++.....
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344555555444555666688999999999999999999999999976 45566666666666632211
Q ss_pred -cc-ccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---chh-
Q 012519 183 -WA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---IFG- 256 (461)
Q Consensus 183 -~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~- 256 (461)
+. .....+.++....+.|++.....|...-+-.|..-|..-+.-.|+.....++=+++-..+-+.+.+..+ |..
T Consensus 351 ~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~ 430 (480)
T KOG2563|consen 351 TCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFP 430 (480)
T ss_pred HhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCcc
Confidence 11 112345566667788888888899888888876534444566677666666555555666666666554 333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q 012519 257 PFVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~ 278 (461)
.-+......++..++..++.|+
T Consensus 431 ~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 431 ANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred chhHhHHHHHHHHHHHhhhhhh
Confidence 3333444444444455555433
No 272
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.35 E-value=0.00034 Score=71.04 Aligned_cols=52 Identities=2% Similarity=-0.132 Sum_probs=41.8
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
...++....-.-+++.++++..+.|++.+...++.+++.++.+++.||.+||
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~ 98 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP 98 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc
Confidence 3333433333445566899999999999999999999999999999999988
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.33 E-value=0.0033 Score=60.83 Aligned_cols=123 Identities=15% Similarity=0.103 Sum_probs=99.5
Q ss_pred CCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc--------ccccHHHHHHHHHHHhhh
Q 012519 131 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--------ADTSLLALLAMRAVVGLA 202 (461)
Q Consensus 131 ~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--------~~~~~~~l~~~r~l~G~~ 202 (461)
.++...+.+..+..++..++..+.....-+..-|+++.++.++..+..+..... ..++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 889999999999999999999999888888899999988888877766542211 012333344455667777
Q ss_pred hhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
.+..+-....+++|..|+..-|...++..+..++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777777888999999999999999999999999999999999999988765
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.20 E-value=0.029 Score=53.77 Aligned_cols=111 Identities=15% Similarity=0.202 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhh---hhcchHHHHHHHHHHHHHHHHhhccc----------------cccHHHHHHHHH
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVD---YYGGKIIMAWGVALWSLATFLTPWAA----------------DTSLLALLAMRA 197 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~d---r~Grr~~~~~~~~~~~i~~~~~~~~~----------------~~~~~~l~~~r~ 197 (461)
+...-...++..++..+.+.+.+ ++||++.+.++..+..++.++.-... .+++...++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33334455555666666777765 58999999999999988888765441 124667788889
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
+.|++.+......+.++++.+ +++|..+.++.-.-..++..++-......
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999 58899999999888888887766554443
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.15 E-value=0.029 Score=54.16 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=35.6
Q ss_pred cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHH
Q 012519 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (461)
Q Consensus 188 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 244 (461)
.++..++.-++.|++.+..+....++.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4667777788899999988888888777 45544 3455555666666555543
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.95 E-value=0.06 Score=51.99 Aligned_cols=112 Identities=15% Similarity=0.054 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhcch-HHHHHHHHH---HHHHHHHhhccc-------cccHHHHHHHHHHHhhhhh
Q 012519 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGK-IIMAWGVAL---WSLATFLTPWAA-------DTSLLALLAMRAVVGLAEG 204 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-~~~~~~~~~---~~i~~~~~~~~~-------~~~~~~l~~~r~l~G~~~g 204 (461)
.-.....+.++-.+|..+..+.. .-++| +.+.+..+. +....++|..-+ -++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34556677777777776554321 11222 122222222 222233333210 1466777777999999999
Q ss_pred chhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
-....+..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998875444
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.59 E-value=0.012 Score=41.79 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=56.5
Q ss_pred HHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHH
Q 012519 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (461)
..+-+.+...+|...++ .++|..+.+++.+...++.++|.+...++.++.+++ .++..+++...+..+..
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR---------RLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHHHHHHHHHHHH
Confidence 34556677788888877 599999999999999999999999999988875444 34455556666655555
Q ss_pred hccChh
Q 012519 417 TAAKSP 422 (461)
Q Consensus 417 ~~~~~~ 422 (461)
...++.
T Consensus 75 a~~~~~ 80 (85)
T PF06779_consen 75 ALTHSF 80 (85)
T ss_pred HHHhch
Confidence 555443
No 278
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.34 E-value=0.012 Score=56.52 Aligned_cols=179 Identities=11% Similarity=0.095 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhh-hhhhhhhcCCCchhHHHHHH----HHHHHHHHhHhhhhhhh-hhhcchHHHHH
Q 012519 96 ERVKVVSMLALALALCNADRVVMSVA-IVPLSLAHGWSRSFSGIVQS----SFLWGYLVSPIAGGTLV-DYYGGKIIMAW 169 (461)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~s~~~~~~~~s----~~~~~~~~~~~~~g~l~-dr~Grr~~~~~ 169 (461)
..|....++.+..+............ -+.....++++.++.-+..+ +..+-.....+..+... -++..|+.++.
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~ 338 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILL 338 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeee
Confidence 34555555555555555544443333 33344456776666544433 22222222222222222 23344555555
Q ss_pred HHHHHHHHHHHhhcc----c-------------------------cccHHHHHHHH-HHHhhhhhchhhHHHHHHHhhcC
Q 012519 170 GVALWSLATFLTPWA----A-------------------------DTSLLALLAMR-AVVGLAEGVALPAMNNMVARWFP 219 (461)
Q Consensus 170 ~~~~~~i~~~~~~~~----~-------------------------~~~~~~l~~~r-~l~G~~~g~~~~~~~~~i~~~~~ 219 (461)
+.++......+.-+- . ..+++.++++. ++.|++.-.......++-+|...
T Consensus 339 g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLg 418 (488)
T KOG2325|consen 339 GFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILG 418 (488)
T ss_pred hHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhC
Confidence 544444333322111 0 01233344443 45677766777788899999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
+++++.+.++++....++..+||++........|.|+...+.+...++...++..
T Consensus 419 p~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~ 473 (488)
T KOG2325|consen 419 PRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIV 473 (488)
T ss_pred CccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877766665554444433
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.97 E-value=0.19 Score=47.49 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=75.0
Q ss_pred CchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHH--HHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhH
Q 012519 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA--WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (461)
Q Consensus 132 s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~--~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 209 (461)
...--|.+-++..+..+++++..|++-.++.+-.-+. +..++.+...++.++. +|.|..+++-++.+.......+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t--~~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT--GNIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344588888888999999999999977777654333 3334444555566777 99999999999988888888888
Q ss_pred HHHHHHhhcCchhhhHHHHHHHHH
Q 012519 210 MNNMVARWFPQTERARAVAIAMGG 233 (461)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~~~~~ 233 (461)
+..-++.....+.-|..+|+....
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHHH
Confidence 888888888777777777765543
No 280
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.78 E-value=0.29 Score=45.04 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=35.1
Q ss_pred HhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
+.+|++..+++.++....+.+++...+.|.+.||+|||
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 34799999999999999999999999999999999998
No 281
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.73 E-value=0.0027 Score=62.97 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhh-hhhhhcCCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhc--chHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYG--GKIIMAWGVALW 174 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~ 174 (461)
.++....++..........+....| +++.+|+.++++++++.++..+ +.++|.+++|++..|+. .|..+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 3455556666666665555666665 5666899999999999876666 66789999999999875 445544444444
Q ss_pred HHHHHH---hhcc------------cc-------------------------------------ccHHHHHHHHHHHhhh
Q 012519 175 SLATFL---TPWA------------AD-------------------------------------TSLLALLAMRAVVGLA 202 (461)
Q Consensus 175 ~i~~~~---~~~~------------~~-------------------------------------~~~~~l~~~r~l~G~~ 202 (461)
.++.++ ..+. +. +++..+++..++.-+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 433332 0000 00 0123344444444444
Q ss_pred hhchhhHHHHHHHhhcCchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 012519 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGF-TSGNAIGLVLSPILMSQ 251 (461)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~G~~~g~~~~~~l~~~ 251 (461)
.+........++-+.+|+++|..++|+..... -+|.+-||++.|.++|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------
T ss_pred HHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 55555556666678889999999999987554 56889999999999885
No 282
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.97 E-value=1.5 Score=38.66 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhcch--HHHHHHHHHHHHHHHHhh----cccc-ccHHHHHHHHHHHhhhhhchhh
Q 012519 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTP----WAAD-TSLLALLAMRAVVGLAEGVALP 208 (461)
Q Consensus 136 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~----~~~~-~~~~~l~~~r~l~G~~~g~~~~ 208 (461)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++..+...+.. .++. .+...-+++.++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999999998876655 345554444444433322 2210 1222334555566677888999
Q ss_pred HHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 012519 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
....+=+++.|++.|...+.++-.-.++=..++-..--.=....+-|..|-++.....+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999998766555433332111000001234678888877776665443
No 283
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.97 E-value=1.3 Score=42.68 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=51.9
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 255 (461)
+++..++.-+..-..+.+..++-+.+.+|.-=|+.|.+.++..++|+---..+.-++++++.++
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 4445677778778888999999999999999999999999999999876666666666665555
No 284
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.60 E-value=1.2 Score=36.16 Aligned_cols=116 Identities=9% Similarity=-0.065 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhC-----CCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhH
Q 012519 333 NAMHSWGFFVILSWMPIYFNFVYH-----IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (461)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g-----~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (461)
.++.+.++..........+++... .+....-.-.++......++.++.+.+.+++|.| +.+.++.+
T Consensus 5 f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~ 75 (156)
T PF05978_consen 5 FMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSL 75 (156)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHH
Confidence 334444444444444444443321 2222233345666677788889999999999987 45555555
Q ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHhhhhhchhHhhhhhccc-ccccc
Q 012519 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVL 458 (461)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~ 458 (461)
...+...... .++.+..+..-.+.+...+..+...-.++.+...+ .+++-
T Consensus 76 ~y~~y~~~~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~ 126 (156)
T PF05978_consen 76 GYAIYIASFF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRN 126 (156)
T ss_pred HHHHHHHHHH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhH
Confidence 5554444433 33455555555556666666666666666666543 35443
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.31 E-value=0.029 Score=51.63 Aligned_cols=108 Identities=16% Similarity=0.003 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhh-cchHHHHHHHHHHHH---HHHHhhccc--------cccHHHHHHHHHHHhhhhhc
Q 012519 138 IVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSL---ATFLTPWAA--------DTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 138 ~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i---~~~~~~~~~--------~~~~~~l~~~r~l~G~~~g~ 205 (461)
....++.++-.+|..+.++..-+- .+|++. +..+.-.+ ..++|..-+ -+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 345678888888888776642111 244433 32222222 122221110 14556777788999999999
Q ss_pred hhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012519 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSP 246 (461)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 246 (461)
....++.+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888888888877654
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.96 E-value=1.1 Score=42.28 Aligned_cols=113 Identities=17% Similarity=0.085 Sum_probs=77.1
Q ss_pred CchhHHHHHHH-HHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHH-h------hccccccHHHHHHHHHHHhhhh
Q 012519 132 SRSFSGIVQSS-FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL-T------PWAADTSLLALLAMRAVVGLAE 203 (461)
Q Consensus 132 s~~~~~~~~s~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~------~~~~~~~~~~l~~~r~l~G~~~ 203 (461)
+..-.-++..+ +.+.-.+|.+.+.++-+.=.|+......+=...+-.+. | .+- .+-+++++.-.+.|+..
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~--~~~~~~~~l~~~lglsn 357 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVF--ESDGWFIFLMSLLGLSN 357 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCcee--cCchHHHHHHHHHHhcc
Confidence 34444555566 88888888777777666533332322222222333332 1 122 56777888899999999
Q ss_pred hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012519 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSP 246 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 246 (461)
|=.....+.+..+-+|++++..+-.+.......|...|..++.
T Consensus 358 GYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 358 GYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred chHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9888889999999999999888888888888888888777653
No 287
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.44 E-value=2.3 Score=39.50 Aligned_cols=167 Identities=13% Similarity=0.070 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCc-hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHH
Q 012519 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (461)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 179 (461)
.+.+.+++++.....-++......++.+++-+. ...+.-...-.....+..++.|...|+..|+|++...+.+--++.+
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 345677888877777777777777777776433 2333333344455667788889999999999998877665433322
Q ss_pred ------Hhhcccc----ccHHHHHHHHHHHhhhhhc--hhhHHHHH--HHhhc----CchhhhHH---HHHHHHHHHHHH
Q 012519 180 ------LTPWAAD----TSLLALLAMRAVVGLAEGV--ALPAMNNM--VARWF----PQTERARA---VAIAMGGFTSGN 238 (461)
Q Consensus 180 ------~~~~~~~----~~~~~l~~~r~l~G~~~g~--~~~~~~~~--i~~~~----~~~~r~~~---~~~~~~~~~~G~ 238 (461)
+..+.+. .++..+..+-++.-...+. ....+.++ -.||. ..+.+... .+..-..=..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 2223321 2444444443333222221 11111111 12343 22333333 355555555667
Q ss_pred HHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 012519 239 AIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 239 ~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 267 (461)
.+.|.+.|.+.+..+-|..-.+.++..++
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 89999999999888888766666666555
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.36 E-value=1.1 Score=40.22 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=79.3
Q ss_pred hhcCCC-chhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHH---HHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhh
Q 012519 127 LAHGWS-RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII---MAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (461)
Q Consensus 127 ~~~~~s-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~---~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~ 202 (461)
+.+..+ ..|+-|....|.+|..+..--.-..--+ .-+. +-.-.+++.+...+..+. +++|..++.-+.-|+-
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ft--psi~ivf~lI~~EGLl 355 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFT--PSIWIVFALILFEGLL 355 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhc
Confidence 334433 3468899988888765432211111101 1112 222233344445556677 9999999999999998
Q ss_pred hhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
.|..+....--+.+-.++++|-.+++.....-++|..++..++-.+
T Consensus 356 GGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 356 GGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred CchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8888888888888878889999999999999888888877765433
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.68 E-value=14 Score=36.15 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=57.6
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 268 (461)
-++.|+.........-..+.+.+| +++|...+|-++...++..++..++++.+.+.+||.....+.-++.++.
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 345566666777777788888886 4578999999999888888777777799999999999888877666554
No 290
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.15 E-value=1.5 Score=39.63 Aligned_cols=106 Identities=12% Similarity=0.009 Sum_probs=59.0
Q ss_pred HHHHHHHHhHHHHHHHhhCCCc--cccchhhhhhHHHHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHH
Q 012519 338 WGFFVILSWMPIYFNFVYHIDL--RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (461)
..........+.+..+. +.+. ...++......+...++.++.|.+.||.||| +........ .....+.
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~--~~~~~~~ 85 (338)
T COG0477 16 LDLGLLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVLIIGLLL--FLLGTLL 85 (338)
T ss_pred HhcchHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHHHHHHHH--HHHHHHH
Confidence 33344445566665553 4444 3577888888888888889999999999777 222222221 1222222
Q ss_pred HhccCh--hHHHHHHHHHHHHHHhhhhhchhHhhhhhccc
Q 012519 416 LTAAKS--PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ 453 (461)
Q Consensus 416 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 453 (461)
...... ...........+...+...+....+..+..|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 125 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPE 125 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc
Confidence 222222 33333333333444455566777777777775
No 291
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=91.13 E-value=19 Score=36.45 Aligned_cols=32 Identities=16% Similarity=-0.020 Sum_probs=16.9
Q ss_pred CccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 358 DLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 358 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
++...+..+..++++..+--++.+....|+.+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lp 354 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLLP 354 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444555666666665555555555544433
No 292
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.63 E-value=0.2 Score=47.42 Aligned_cols=129 Identities=14% Similarity=0.017 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHh
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 216 (461)
.|-..++.+...+.++...++.||+|-|+.+..+...+.++..+.++. ++.+....-+-..|+-.+.....-+..+++
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~--~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLV--LNTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhh--hhHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 355567777888899999999999998777777777788888888888 888888888888886555555544444444
Q ss_pred hcCc-----------------------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHH
Q 012519 217 WFPQ-----------------------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFL 267 (461)
Q Consensus 217 ~~~~-----------------------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~ 267 (461)
+.-. ..+|...|+.++...+.+++.....|.+.+.+| =+.+-++.+.+++.
T Consensus 413 y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 413 YAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 3211 235777788888888888888888888877766 34444444444443
No 293
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.55 E-value=4.6 Score=35.60 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhh-hcchHHHH----HHHHHHHHHHHHhhcc-ccc--cHHHHHHHHHHHhhhhhchhh
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMA----WGVALWSLATFLTPWA-ADT--SLLALLAMRAVVGLAEGVALP 208 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~~~~i~~~~~~~~-~~~--~~~~l~~~r~l~G~~~g~~~~ 208 (461)
....-++..|..+|.+..|+.... +.||+.+. .+++++.+..+..+.. ..+ ++..+++.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444556667777777777888774 55666433 3455555554442122 112 366788888888877544444
Q ss_pred HHHHHHHhhcCchhhhHHHHHHHHHHHHHHHH
Q 012519 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (461)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 240 (461)
+...+ ..-++..++.+.--.++..+++|.++
T Consensus 224 ViL~l-PhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNL-PHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcC-hhhhcCCCcceehhHHHHHHHHHHHH
Confidence 33322 22222222223333334445555444
No 294
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=89.96 E-value=1.2 Score=45.47 Aligned_cols=52 Identities=10% Similarity=0.190 Sum_probs=42.2
Q ss_pred HHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+|++...+..|+.+.+|++...+..+...+....-+..+++|+++|++-.+
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~ 53 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK 53 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4566777788888888899988888888888888888889999999976544
No 295
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.26 E-value=0.097 Score=45.40 Aligned_cols=63 Identities=3% Similarity=0.075 Sum_probs=43.9
Q ss_pred hHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHH
Q 012519 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGY 378 (461)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~ 378 (461)
+|..-|++-.+.-+.+.+.+.-...+.-..|++.|..+..+++....+++-.+..++....+.
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 444556676777788888888888888888999998887777766655655555555444443
No 296
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=87.99 E-value=16 Score=31.29 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=24.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 012519 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
+++.+--.......-++..+|..+++.+.+..+.. ..++.+.+
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33333444455556666777777777777777743 44443333
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.80 E-value=0.17 Score=46.62 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 242 (461)
++.|++.+..+...+++.+. +|++. +.....+.++++++..
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s 45 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVS 45 (309)
T ss_dssp ----------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHH
Confidence 45677777777777777775 55544 3344444555554443
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=87.03 E-value=25 Score=32.54 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=86.7
Q ss_pred hhhhhhhc-CCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHH-------HHHHhhccccccHHHHH
Q 012519 122 IVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL-------ATFLTPWAADTSLLALL 193 (461)
Q Consensus 122 ~~~i~~~~-~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i-------~~~~~~~~~~~~~~~l~ 193 (461)
+..+...+ |-.--|.+++.+.|.....+|+...-++.|.--.-+.+.+-.++..+ ..+.+++-..++-+.++
T Consensus 30 l~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly 109 (508)
T COG4262 30 LGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLY 109 (508)
T ss_pred HHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHH
Confidence 33344433 55677899999999999999999988888753333222222222211 12223332235677888
Q ss_pred HHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCchhHHHHHHHHHHHHHHH
Q 012519 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL-MSQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 194 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l-~~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
+.-++.|.-.|...|..+.++..-. .+-....+.....-.+|...+.++-.++ ....|---.-...+++.++..+.
T Consensus 110 ~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv 186 (508)
T COG4262 110 ALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVV 186 (508)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999887732 1222222233333566766666665554 33445333333445555554433
No 299
>PRK03612 spermidine synthase; Provisional
Probab=85.39 E-value=16 Score=36.54 Aligned_cols=58 Identities=12% Similarity=-0.018 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhh
Q 012519 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (461)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr 386 (461)
+.+..++..++...........+...+|.+....+.+.+++.++..+|+.+++++.++
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3444555566666666666677777778888888888888888888888887776533
No 300
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.78 E-value=3.8 Score=41.96 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhh-hhhhhcCCCchhHHHHHHHHHH-HHHHhHhhhhhhhhhhc--chHHHHHHHHHHH
Q 012519 100 VVSMLALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYG--GKIIMAWGVALWS 175 (461)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~ 175 (461)
+..+..++..+......-+...+| ++.++|+.+.+.+..+.+...+ +.++|.+++|++..|+- .|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 455566666666665555666666 4666899999999999865555 45788889999999864 4555444444444
Q ss_pred HHH
Q 012519 176 LAT 178 (461)
Q Consensus 176 i~~ 178 (461)
+..
T Consensus 473 l~l 475 (735)
T KOG3626|consen 473 LSL 475 (735)
T ss_pred HHH
Confidence 433
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=82.81 E-value=21 Score=35.61 Aligned_cols=71 Identities=8% Similarity=0.200 Sum_probs=33.9
Q ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
.++||.|+- ...+..++...............+....-+++..-|.+.....+.-++.++++|+.+-|+-+
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 377877652 22222333333333333333333333222455555555555555556666666666665543
No 302
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=82.43 E-value=14 Score=34.18 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHH--HHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHH
Q 012519 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW--GVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (461)
Q Consensus 137 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~--~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 214 (461)
|..-++..+..+++.+..|.+--.+.|..-+++ +.+.-+...++++.. ++.|..+++.++-+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t--~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT--QHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc--cceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 555566777788889999999888877654444 434444444455555 8999999988888887787888888888
Q ss_pred HhhcCchhhhHHHHHHHHH
Q 012519 215 ARWFPQTERARAVAIAMGG 233 (461)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~ 233 (461)
++....+.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888888888888876543
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=80.65 E-value=62 Score=32.00 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=55.9
Q ss_pred HHHHhhhhhchhhHHHHHHHhhcC-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 012519 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (461)
Q Consensus 196 r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (461)
-+..|+.........-..+.+.+| ++++...+|-++...++-.++-..+++.+.+.+||+..-.+.-++.++..+
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 344566666666777777888886 456788888888888877777778889999999999988886655554443
No 304
>PRK10263 DNA translocase FtsK; Provisional
Probab=79.38 E-value=30 Score=38.05 Aligned_cols=25 Identities=32% Similarity=0.335 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHH
Q 012519 236 SGNAIGLVLSPILMSQAGIFGPFVI 260 (461)
Q Consensus 236 ~G~~~g~~~~~~l~~~~gwr~~f~~ 260 (461)
.|+++|..++.++...+|.-...++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHH
Confidence 4666666666666655554444333
No 305
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=78.52 E-value=52 Score=29.85 Aligned_cols=158 Identities=13% Similarity=0.054 Sum_probs=80.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh---hcchHHHHHH
Q 012519 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY---YGGKIIMAWG 170 (461)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~~~~~ 170 (461)
.+++....+++.+++++.-...+...-.+..+.+..+.-....++..++.... ++.+-.++ ||.||.=+++
T Consensus 20 ~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 20 NERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHH
Confidence 34455555666666666666556666667777777776666666655544333 23344443 8888866666
Q ss_pred HHHHHHHHHHhhcc-----------c--cccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHH
Q 012519 171 VALWSLATFLTPWA-----------A--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (461)
Q Consensus 171 ~~~~~i~~~~~~~~-----------~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 237 (461)
.+..++..+..++. + .++..++++ .+.|+..- ..+.-++.+- ..+....--++.....-.-
T Consensus 94 a~~nav~Li~~s~~I~~EAi~R~~~P~~i~~~~ml~v--a~~GL~vN---~~~a~ll~~~-~~~~lN~r~a~LHvl~D~L 167 (296)
T COG1230 94 AFLNALLLIVVSLLILWEAIQRLLAPPPIHYSGMLVV--AIIGLVVN---LVSALLLHKG-HEENLNMRGAYLHVLGDAL 167 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH--HHHHHHHH---HHHHHHhhCC-CcccchHHHHHHHHHHHHH
Confidence 55555544433222 1 112222222 22233211 1122222222 2223444445555544444
Q ss_pred HHHHHHHHHHHHhhcCchhHHHHHHH
Q 012519 238 NAIGLVLSPILMSQAGIFGPFVIFGL 263 (461)
Q Consensus 238 ~~~g~~~~~~l~~~~gwr~~f~~~~~ 263 (461)
+-+|.++++.+...+||.|.=-+.++
T Consensus 168 gsv~vIia~i~i~~~~w~~~Dpi~si 193 (296)
T COG1230 168 GSVGVIIAAIVIRFTGWSWLDPILSI 193 (296)
T ss_pred HHHHHHHHHHHHHHhCCCccchHHHH
Confidence 55566667777777899985444433
No 306
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=74.80 E-value=24 Score=33.33 Aligned_cols=136 Identities=11% Similarity=-0.018 Sum_probs=80.7
Q ss_pred hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhh------hcchHHHHHHHHHHHHHH-HHhhc-cc-----ccc
Q 012519 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY------YGGKIIMAWGVALWSLAT-FLTPW-AA-----DTS 188 (461)
Q Consensus 122 ~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr------~Grr~~~~~~~~~~~i~~-~~~~~-~~-----~~~ 188 (461)
.+.-.-|.|++..+.+++.-...-...+.+...|++... +-|+-.+-+......... .+... .+ ...
T Consensus 288 t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~ 367 (510)
T KOG3574|consen 288 TSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRG 367 (510)
T ss_pred cchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeec
Confidence 344455789999998887643333344444444554442 111111111111111111 11111 10 012
Q ss_pred HHH-HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhH
Q 012519 189 LLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (461)
Q Consensus 189 ~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~ 257 (461)
+.. .+....+.+...-..+...++..++..+|.--|+.|.+.++..++|.-.-..+...+.+.++|.-.
T Consensus 368 ~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 368 YYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 333 333456666666667788899999999999999999999999999988877778888887776643
No 307
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=74.05 E-value=1.2e+02 Score=31.86 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 012519 227 VAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (461)
Q Consensus 227 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 266 (461)
.-+...+..++.++..+++.++...++|..++++.++++-
T Consensus 103 ~rLl~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 103 TMLLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 3334444455555555555555455678877777766654
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.58 E-value=13 Score=27.40 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhh
Q 012519 138 IVQSSFLWGYLVSPIAGGTLVDYY 161 (461)
Q Consensus 138 ~~~s~~~~~~~~~~~~~g~l~dr~ 161 (461)
+-.+.-+++..+.....||+.|||
T Consensus 46 ~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455566666667779999996
No 309
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=72.56 E-value=68 Score=28.26 Aligned_cols=19 Identities=16% Similarity=0.142 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHhhhhHhhc
Q 012519 372 VMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 372 ~~~i~~~~~g~l~dr~~~~ 390 (461)
+..+..+.+-.++.|+..|
T Consensus 252 CT~lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVR 270 (294)
T ss_pred HHHHHHhhhHHHhhhheeE
Confidence 3344444444577777776
No 310
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=70.89 E-value=32 Score=31.22 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 168 AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 168 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
+.++++++++.++..+.. ++.|.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~-~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLF-PYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHH
Confidence 344455544444444431 5566666666666665553
No 311
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=70.77 E-value=76 Score=28.13 Aligned_cols=48 Identities=6% Similarity=-0.160 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhh----CCCccccchhhhhhHHHHHHHH
Q 012519 330 IVANAMHSWGFFVILSWMPIYFNFVY----HIDLRQASWFSAVPWSVMAFTG 377 (461)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~i~~ 377 (461)
.+...+.....++....=..|+++.. +-+.....++++-+....+.+.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt 235 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTST 235 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHH
Confidence 33444444555665555557777753 2344444445544433333333
No 312
>COG3619 Predicted membrane protein [Function unknown]
Probab=68.19 E-value=81 Score=27.39 Aligned_cols=157 Identities=9% Similarity=0.052 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhhh--------hhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcc-hH--
Q 012519 97 RVKVVSMLALALALCNADRVVMSVAIVP--------LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KI-- 165 (461)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-- 165 (461)
.+....++..+.+++.+.....+-.... +.-++.-.+...........+..+++......+..|..| ..
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~ 89 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPV 89 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 3445555666666666655333221111 111222234455566667777777776555555555554 12
Q ss_pred HHHHHHHHHHHHHHHhhccc--cccHHHHHHHHHHHh-----------hhhhchhh-----HHHHHHHhhcCch-hhhHH
Q 012519 166 IMAWGVALWSLATFLTPWAA--DTSLLALLAMRAVVG-----------LAEGVALP-----AMNNMVARWFPQT-ERARA 226 (461)
Q Consensus 166 ~~~~~~~~~~i~~~~~~~~~--~~~~~~l~~~r~l~G-----------~~~g~~~~-----~~~~~i~~~~~~~-~r~~~ 226 (461)
......++..+..+..++.+ .++....+..-+..| .+.+..+. ....-+.++...| +.-.-
T Consensus 90 l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~ 169 (226)
T COG3619 90 LLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFRKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLR 169 (226)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHH
Confidence 22223333333333344431 134444444444444 22221111 1222244444332 22223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 227 VAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 227 ~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
-.+.+...-++.++|...++++...+|
T Consensus 170 ~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 170 DWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445555666777777777666555
No 313
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=66.68 E-value=61 Score=26.56 Aligned_cols=58 Identities=17% Similarity=0.141 Sum_probs=34.6
Q ss_pred hcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CchhHHHHHHHHHHHHHHHHHH
Q 012519 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
.+|.+++.+..+.+.++.-.+...--.+-+.+.+.. .+...+++.++++.+..++.=.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 445555556666655555555444445555554432 4788888888888876665443
No 314
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=66.17 E-value=78 Score=32.99 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=33.5
Q ss_pred hhhhhhh----hcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 154 GGTLVDY----YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 154 ~g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
++-+.|. -||.+-++++.++++++++...+.. +..|.+..+-++.+++.++
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~-~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF-PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHH
Confidence 3445553 3667888888888888888766652 5555666666666665553
No 315
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=65.23 E-value=85 Score=26.59 Aligned_cols=35 Identities=17% Similarity=-0.048 Sum_probs=27.9
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.-|+......+..++++.++..++.+.+..+.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34667778888899999988888888888877665
No 316
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=64.95 E-value=63 Score=33.62 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=32.8
Q ss_pred hhhhhh----hcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhc
Q 012519 155 GTLVDY----YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 155 g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 205 (461)
+-++|. -||.+-++++.+++.++++...+.. +..|.+..+-++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~-~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF-GKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHH
Confidence 455553 4677788888888888877766552 5556666666666665543
No 317
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=63.20 E-value=10 Score=32.56 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=37.6
Q ss_pred HHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 195 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
.-.-.|+|.|..+.++..-+.+.+| +......++..+..-+..+.|-.+.-++
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455789999889999999999996 5666677777666666666655544433
No 318
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=59.76 E-value=1.4e+02 Score=27.32 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=15.8
Q ss_pred cHHHHHHHHHHHhhhhhchh-hHHHHHHHhhcC
Q 012519 188 SLLALLAMRAVVGLAEGVAL-PAMNNMVARWFP 219 (461)
Q Consensus 188 ~~~~l~~~r~l~G~~~g~~~-~~~~~~i~~~~~ 219 (461)
+.+.-.+--.+.+++.|... .+..-++.|...
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455566777766443 333334444443
No 319
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=59.30 E-value=2.1e+02 Score=29.10 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012519 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (461)
Q Consensus 188 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 252 (461)
|.++++--.++.|++.........=+.-+-+|++-|..+.+++....++|..+..++........
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57777888899999999998888888888999999999999999999999999999887765443
No 320
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=53.89 E-value=51 Score=26.43 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=21.7
Q ss_pred HHHHHHHHHhHhhhhhhhhhhcchH
Q 012519 141 SSFLWGYLVSPIAGGTLVDYYGGKI 165 (461)
Q Consensus 141 s~~~~~~~~~~~~~g~l~dr~Grr~ 165 (461)
.-|.+++.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4788899999999999999988764
No 321
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=53.55 E-value=45 Score=26.78 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=36.3
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHH
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 240 (461)
+++..++..-++.|+| .....|.+++...++++-|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4566666665555555 33456777777788888999999988888887654
No 322
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=52.13 E-value=1.9e+02 Score=26.34 Aligned_cols=61 Identities=15% Similarity=0.167 Sum_probs=33.6
Q ss_pred HHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 012519 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (461)
Q Consensus 192 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 254 (461)
.-..|.+.|+-.= .+...+++++-.||++++--..--.....++..++-|++ |.+.+...|
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhccC
Confidence 4556888877654 446688999999985543322222233333334444444 444454444
No 323
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=51.48 E-value=42 Score=24.93 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc
Q 012519 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 134 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 184 (461)
+..|=+.++|.-.+.+.++.+++..|+.-+.+-=.+|..+..++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 667888999999999999999999999988888888888888887776555
No 324
>PRK10263 DNA translocase FtsK; Provisional
Probab=46.58 E-value=3.5e+02 Score=30.49 Aligned_cols=21 Identities=19% Similarity=0.039 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhhhhHhhc
Q 012519 370 WSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 370 ~~~~~i~~~~~g~l~dr~~~~ 390 (461)
..++++|.++...+...+|.-
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHH
Confidence 457888888888888888765
No 325
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.18 E-value=58 Score=24.22 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHhhhhHhhc
Q 012519 370 WSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 370 ~~~~~i~~~~~g~l~dr~~~~ 390 (461)
.+.+++.....||+.||+-..
T Consensus 52 fIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 345666677888999998654
No 326
>PRK02237 hypothetical protein; Provisional
Probab=45.60 E-value=70 Score=23.87 Aligned_cols=51 Identities=16% Similarity=0.011 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc
Q 012519 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 134 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 184 (461)
+..|=+.++|.-.+.+.++++++..|+.-+-+-=.+|..+..+|..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 447888999999999999999999999988887788888888877666555
No 327
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=43.82 E-value=82 Score=26.54 Aligned_cols=32 Identities=13% Similarity=-0.072 Sum_probs=14.7
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 012519 242 LVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (461)
Q Consensus 242 ~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (461)
+++++.......-.|.....|.+.+...+-.+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~~l 74 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIKAL 74 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444454455555555444333
No 328
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=43.31 E-value=67 Score=26.84 Aligned_cols=23 Identities=17% Similarity=0.430 Sum_probs=20.2
Q ss_pred HHHHHHHHHhHhhhhhhhhhhcc
Q 012519 141 SSFLWGYLVSPIAGGTLVDYYGG 163 (461)
Q Consensus 141 s~~~~~~~~~~~~~g~l~dr~Gr 163 (461)
.-|.+++.+++.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 56788999999999999999875
No 329
>COG4769 Predicted membrane protein [Function unknown]
Probab=40.07 E-value=46 Score=26.93 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=34.8
Q ss_pred HHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhh
Q 012519 142 SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (461)
Q Consensus 142 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~ 202 (461)
++.+..++.+...-++..++|+|.+-.++.-.. .++. +|..++.+.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~--hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFT--HNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHH--HhHHHHHHHHHHHhcc
Confidence 344555566666677888899887644443322 2556 8888888888887643
No 330
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=39.84 E-value=46 Score=24.87 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=23.9
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 012519 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (461)
Q Consensus 250 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (461)
+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999988888877777777776654
No 331
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=39.59 E-value=3.3e+02 Score=25.62 Aligned_cols=13 Identities=8% Similarity=0.069 Sum_probs=10.8
Q ss_pred ccHHHHHHHHHHH
Q 012519 187 TSLLALLAMRAVV 199 (461)
Q Consensus 187 ~~~~~l~~~r~l~ 199 (461)
-.||++++.|++-
T Consensus 203 fayWLFYiVri~~ 215 (531)
T KOG3814|consen 203 FAYWLFYIVRILD 215 (531)
T ss_pred HHHHHHHhhhhhc
Confidence 4689999999876
No 332
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=38.92 E-value=2.9e+02 Score=26.43 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=43.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHhhcC
Q 012519 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRG 391 (461)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~ 391 (461)
+....+...+++....--...+-...|+.+..|-+....+..-.+-+...++...+.|-..|+..|.+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 34445566677777777777777778887766645444444444444555566666677778887763
No 333
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.87 E-value=2.1e+02 Score=23.12 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHHHHHhHhhhhhhhhhhcch
Q 012519 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (461)
Q Consensus 133 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 164 (461)
+..+.++.+...++..+..+-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 34567778888888888899999999888755
No 334
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=38.51 E-value=3.5e+02 Score=25.58 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=11.7
Q ss_pred hhhhcchHHHHHHHHH
Q 012519 158 VDYYGGKIIMAWGVAL 173 (461)
Q Consensus 158 ~dr~Grr~~~~~~~~~ 173 (461)
.||+.-.|++.+.+-+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999999976654433
No 335
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=37.87 E-value=1.3e+02 Score=29.30 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=10.0
Q ss_pred ccHHHHHHHHHH
Q 012519 187 TSLLALLAMRAV 198 (461)
Q Consensus 187 ~~~~~l~~~r~l 198 (461)
-.||+|++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 578999998886
No 336
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=37.57 E-value=1.3e+02 Score=23.11 Aligned_cols=55 Identities=15% Similarity=0.079 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhh
Q 012519 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLV 158 (461)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~ 158 (461)
+..+.++.......+..-+.....+=.++..+.-|=..+|.+.+++-++-+|.+.
T Consensus 48 l~AG~vLw~vM~~iFd~CIDsWkAdpeLnn~rymWNilMYaIPy~L~Ala~GFlv 102 (141)
T PRK13743 48 LTAGIVLWVIMHSIFDACIDSWKADPELNNFRYMWNILMYVIPYTLWALAAGFLV 102 (141)
T ss_pred HHhhHHHHHHHHHHHHHHHHhhhcChhhhhHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 3334444333344444555555555556667777888888888887777776654
No 337
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.62 E-value=1.1e+02 Score=19.06 Aligned_cols=33 Identities=21% Similarity=0.169 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhhcC----chhHHHHHHHHHHHHHHHH
Q 012519 240 IGLVLSPILMSQAG----IFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 240 ~g~~~~~~l~~~~g----wr~~f~~~~~~~~~~~~~~ 272 (461)
+|..+++++.+.++ +.+.-++.+++..+.++..
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 34444444444333 3444445555544444433
No 338
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=36.20 E-value=2.8e+02 Score=23.84 Aligned_cols=77 Identities=22% Similarity=0.178 Sum_probs=46.6
Q ss_pred ccHHHHHHHHHHHhhhhhchhhHHHHHHHhh--cCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 012519 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARW--FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (461)
Q Consensus 187 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~--~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 264 (461)
.+.|.++...++.|+......|....+..+. ..+.+..+..=++..+.++|..++--+...+ +||+..+++...-
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi---~g~~l~~~l~~~Y 136 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII---FGIPLWYFLIPGY 136 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHH
Confidence 6888888999999999999999888876543 2333333444444444455544443333333 3777655554443
Q ss_pred HH
Q 012519 265 GF 266 (461)
Q Consensus 265 ~~ 266 (461)
.+
T Consensus 137 ~l 138 (212)
T PF07556_consen 137 IL 138 (212)
T ss_pred HH
Confidence 33
No 339
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=35.59 E-value=3.9e+02 Score=25.30 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=11.0
Q ss_pred HHHhcchhhHHHHHHHHHH
Q 012519 318 RRLLSKMPTWSIIVANAMH 336 (461)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~ 336 (461)
++.+++|.++...++..+.
T Consensus 239 ~~~~~nP~~~a~~lgli~~ 257 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLIIG 257 (385)
T ss_pred HHHHhCcHHHHHHHHHHHH
Confidence 4566677766655544443
No 340
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=34.48 E-value=4.6e+02 Score=25.83 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=20.6
Q ss_pred cchHHHHHHHHHHHHHHHHhhccccccHHHHH
Q 012519 162 GGKIIMAWGVALWSLATFLTPWAADTSLLALL 193 (461)
Q Consensus 162 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 193 (461)
|.|+.....++.+.++.++-++. +++....
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~--~gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLY--PGYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCC--cHHHHHH
Confidence 44555666667777888888888 7766544
No 341
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.90 E-value=1.9e+02 Score=21.39 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=11.7
Q ss_pred hHhhhhhhhhh-hcchHHHHHHHHHH
Q 012519 150 SPIAGGTLVDY-YGGKIIMAWGVALW 174 (461)
Q Consensus 150 ~~~~~g~l~dr-~Grr~~~~~~~~~~ 174 (461)
.....|+..|+ ||-++.+.+.+++.
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 33444556664 55554444433333
No 342
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=33.21 E-value=4.7e+02 Score=25.53 Aligned_cols=147 Identities=10% Similarity=-0.081 Sum_probs=75.4
Q ss_pred HhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHH
Q 012519 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (461)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (461)
.|..|+++|-..........+.-..++....|.+... .+++...+...+-.++..++..+.--.-++..-
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Gl--------- 81 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGL--------- 81 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCC---------
Confidence 4567777785444665555555555555555554333 566666655444444433333332111111100
Q ss_pred HHHhhcCccccCCCCCCCCCChhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHH
Q 012519 294 ILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (461)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (461)
+....-|..|..+.-+...+...+.+.++++++.++.-.... -.+.....+...+.++..
T Consensus 82 ------------------pqmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~ 141 (442)
T COG1457 82 ------------------PQMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLM 141 (442)
T ss_pred ------------------ChheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHH
Confidence 000011233444444566666666677777777766554411 113333444555556666
Q ss_pred HHHHHHHHHhhhhHhhc
Q 012519 374 AFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 374 ~i~~~~~g~l~dr~~~~ 390 (461)
++..+++-+...++.|-
T Consensus 142 ~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 142 TLVTIFGYRALHKLERI 158 (442)
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 77777777777777654
No 343
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=32.86 E-value=2e+02 Score=21.24 Aligned_cols=27 Identities=7% Similarity=-0.005 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012519 227 VAIAMGGFTSGNAIGLVLSPILMSQAG 253 (461)
Q Consensus 227 ~~~~~~~~~~G~~~g~~~~~~l~~~~g 253 (461)
+|.......+..++|..+|-+|=.+++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334444445555666666666666665
No 344
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=31.91 E-value=1.5e+02 Score=19.28 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 235 ~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
-+|.++|.+.+......+++.....+..+.+++..++...
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~ 51 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAV 51 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3455565555554444566676666666666655554443
No 345
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=31.56 E-value=3.4e+02 Score=26.49 Aligned_cols=118 Identities=19% Similarity=0.124 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhh
Q 012519 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (461)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 182 (461)
+..+-..+..+......|. .+..+++++.++...+.+.-.+...++.++--....++|-|-....+.-...++.+...
T Consensus 20 ~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~ 97 (451)
T COG2233 20 LLGLQHLLAMFGATVLVPL--LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAI 97 (451)
T ss_pred HHHHHHHHHHHhcchHhhH--HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHH
Confidence 3444444444433232222 24567899999999999999999999999887755556656555555555555554433
Q ss_pred cccc-ccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchh
Q 012519 183 WAAD-TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE 222 (461)
Q Consensus 183 ~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 222 (461)
.... ......+.+-+..|+..-...+.....+.+.+||--
T Consensus 98 ~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvV 138 (451)
T COG2233 98 GGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVV 138 (451)
T ss_pred HhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 3310 124445555555555433332222226666666643
No 346
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.05 E-value=1.8e+02 Score=28.99 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=24.2
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHhhhhHhh
Q 012519 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (461)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (461)
-+++..=|.++....+.-++.++++|+.+.|+-+
T Consensus 355 flSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 355 FLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYK 388 (628)
T ss_pred cCCccccccHHHHHHHHHHHHHHhhhhhhhhhHh
Confidence 3577777777777777777777777877777654
No 347
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=30.73 E-value=4.9e+02 Score=24.99 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=27.9
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 244 (461)
++.|+..|.........+.+...-++---+.++...+.-+|.+..++.
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHH
Confidence 445555554444444456666655666667777776666666655544
No 348
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=30.21 E-value=5.1e+02 Score=25.06 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=17.0
Q ss_pred hchhhHHHHHHHhhcCchh--hhHHHHHHHH
Q 012519 204 GVALPAMNNMVARWFPQTE--RARAVAIAMG 232 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~ 232 (461)
|+.+.+..++.++.+|..+ |+..++....
T Consensus 176 g~~~~avaalf~qL~~~a~~t~g~~f~llG~ 206 (536)
T COG3559 176 GMVFTAVAALFAQLSPSARFTRGVAFALLGT 206 (536)
T ss_pred HHHHHHHHHHHHHhCccccccchhHHHHHHH
Confidence 4556677777888886544 3444444433
No 349
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=29.67 E-value=3.5e+02 Score=22.93 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=23.9
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012519 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (461)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 250 (461)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888888888777644
No 350
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=29.50 E-value=57 Score=30.15 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=54.4
Q ss_pred CCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc--ccccHHHHHHHHHHHhhhhhc
Q 012519 131 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMRAVVGLAEGV 205 (461)
Q Consensus 131 ~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~~r~l~G~~~g~ 205 (461)
+.-++++..+.++.++.++.+.+.|.+..++||-..+..+.+.-..-....-+. ...+.+.+++.-.+-|.|.+.
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~v 383 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDAV 383 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHHH
Confidence 345688999999999999999999999999999998888776654433322221 114566677777777776653
No 351
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=29.42 E-value=26 Score=27.37 Aligned_cols=16 Identities=13% Similarity=-0.008 Sum_probs=8.0
Q ss_pred hhHHHHHHHHHHHHHH
Q 012519 255 FGPFVIFGLSGFLWVL 270 (461)
Q Consensus 255 r~~f~~~~~~~~~~~~ 270 (461)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 5666555444444333
No 352
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.97 E-value=5.5e+02 Score=24.99 Aligned_cols=44 Identities=14% Similarity=-0.056 Sum_probs=24.5
Q ss_pred hhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHH
Q 012519 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (461)
Q Consensus 124 ~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 171 (461)
++.+...+.+-|+.++..+..+.+. +.=-+++++|--...+++.
T Consensus 316 E~~~~~~iHpiQY~LVGlAl~lFYl----LLLSlSEhi~F~~AYliAa 359 (430)
T PF06123_consen 316 ELLSKLRIHPIQYLLVGLALVLFYL----LLLSLSEHIGFNLAYLIAA 359 (430)
T ss_pred HHHhcCcccHHHHHHHHHHHHHHHH----HHHHHHhhhchHHHHHHHH
Confidence 3445556678887776554444333 2335677766555544443
No 353
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=28.51 E-value=3e+02 Score=21.78 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=20.4
Q ss_pred HHhhcCchhhhHHHHHHHHHHHHHHHH
Q 012519 214 VARWFPQTERARAVAIAMGGFTSGNAI 240 (461)
Q Consensus 214 i~~~~~~~~r~~~~~~~~~~~~~G~~~ 240 (461)
+.|++|++.|..+.+.+........-+
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~ 86 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSL 86 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999998888877665554433
No 354
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=27.85 E-value=2.6e+02 Score=20.93 Aligned_cols=65 Identities=9% Similarity=-0.068 Sum_probs=33.0
Q ss_pred HhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHh
Q 012519 151 PIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (461)
Q Consensus 151 ~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 216 (461)
.-..=..+|.|.|+...+...+...++..+.+.+. .+.+.=.+=-.-.|+|..........+..|
T Consensus 17 ~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al-k~ipvgvAYAiW~GiG~v~~~l~g~~~f~E 81 (106)
T COG2076 17 GTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL-KTIPLGVAYAIWTGIGIVGTALVGVLLFGE 81 (106)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33445677777777777666666666666655552 222222222334455544333333333333
No 355
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=27.72 E-value=1.4e+02 Score=22.73 Aligned_cols=26 Identities=15% Similarity=-0.051 Sum_probs=15.8
Q ss_pred ChhHHHHhcchhhHHHHHHHHHHHHH
Q 012519 314 IPPFRRLLSKMPTWSIIVANAMHSWG 339 (461)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (461)
....+.++++++++...+...+....
T Consensus 32 ~~~~~~Ll~n~~y~ipf~lNq~GSv~ 57 (113)
T PF10639_consen 32 LQEIKFLLLNPKYIIPFLLNQSGSVL 57 (113)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 34556778888877666555544433
No 356
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=27.68 E-value=5.3e+02 Score=28.01 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=31.1
Q ss_pred HhhhhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHH
Q 012519 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (461)
Q Consensus 119 ~~~~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 172 (461)
.-....+...+|++....|+...+. +..+.-++....+-|-|.-.+.+...+
T Consensus 953 V~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAVan~i 1004 (1096)
T TIGR00927 953 VWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAVSSSV 1004 (1096)
T ss_pred HHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcceeeecc
Confidence 3345566777888888777655433 555666666666666665554433333
No 357
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=27.47 E-value=1.8e+02 Score=19.22 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=16.4
Q ss_pred HHhhcC-----chhHHHHHHHHH---HHHHHHHHHhcCCCC
Q 012519 248 LMSQAG-----IFGPFVIFGLSG---FLWVLVWLSATSSTP 280 (461)
Q Consensus 248 l~~~~g-----wr~~f~~~~~~~---~~~~~~~~~~~~~~~ 280 (461)
+.+++| +|..|.+..++. ++.=++.+++.|+.|
T Consensus 20 lA~~~gid~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 20 LAEYFGIDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 445555 466666655543 233334455556654
No 358
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=27.34 E-value=2.4e+02 Score=20.32 Aligned_cols=70 Identities=10% Similarity=0.081 Sum_probs=37.8
Q ss_pred hHHHHhcc--hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccccchhhhhhHHHHHHHHHHHHHhhhhHh
Q 012519 316 PFRRLLSK--MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (461)
Q Consensus 316 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (461)
.++++.+. +-.+.+.+..+..++++.....+.|..+.....-+....|+.. +++..+...+..++.-+.-
T Consensus 6 ~f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~---g~~~~~~~~~l~~~Yv~~A 77 (91)
T PF04341_consen 6 EFQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVL---GLGQIVFAWVLTWLYVRRA 77 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 34444443 3455666677777777777888888887664321233333333 3344444444444443433
No 359
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=27.16 E-value=5.8e+02 Score=24.63 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=25.6
Q ss_pred HHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 012519 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (461)
Q Consensus 198 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 245 (461)
+.|+-.|........++ |...-++---+.++...+..+|.++.++..
T Consensus 298 iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 298 LIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 34444444444444444 445445555677777766666666655543
No 360
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=27.01 E-value=3.8e+02 Score=22.45 Aligned_cols=61 Identities=21% Similarity=0.157 Sum_probs=37.2
Q ss_pred hchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 012519 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (461)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 266 (461)
+.......+.+.+..|+++|.++.-+-..+..+--.+.-..+.++.+. |++..++.|+..+
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~Ll 71 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLFLL 71 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 446677788888889988877666554443334445555566666665 3555555554433
No 361
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=26.98 E-value=4.4e+02 Score=23.25 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 012519 224 ARAVAIAMGGFTSGNAIGLVLSPIL 248 (461)
Q Consensus 224 ~~~~~~~~~~~~~G~~~g~~~~~~l 248 (461)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566666666666554444
No 362
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=26.31 E-value=5.7e+02 Score=24.26 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=21.5
Q ss_pred HhhhHhhhhhhhhhcCCCchhHHHHHH
Q 012519 115 RVVMSVAIVPLSLAHGWSRSFSGIVQS 141 (461)
Q Consensus 115 ~~~~~~~~~~i~~~~~~s~~~~~~~~s 141 (461)
.-.+...+....+++|+++.-.|.+..
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvIIa 264 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLVA 264 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHHH
Confidence 445666778888999999999998863
No 363
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=25.84 E-value=3.8e+02 Score=22.06 Aligned_cols=37 Identities=8% Similarity=-0.115 Sum_probs=19.0
Q ss_pred hhhhhhhhhc-CCC------chhHHHHHHHHHHHHHHhHhhhhh
Q 012519 120 VAIVPLSLAH-GWS------RSFSGIVQSSFLWGYLVSPIAGGT 156 (461)
Q Consensus 120 ~~~~~i~~~~-~~s------~~~~~~~~s~~~~~~~~~~~~~g~ 156 (461)
|-.|++..|+ |++ .....|......+..+..++..|.
T Consensus 40 PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~ 83 (168)
T PF07099_consen 40 PNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGF 83 (168)
T ss_pred CCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555554 333 334455555555555555555553
No 364
>PRK11017 codB cytosine permease; Provisional
Probab=25.79 E-value=6e+02 Score=24.41 Aligned_cols=52 Identities=12% Similarity=0.052 Sum_probs=27.7
Q ss_pred hhcCchhhhHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCchhHHHHHHHHHHH
Q 012519 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSP-ILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~-~l~~~~gwr~~f~~~~~~~~~ 267 (461)
|-.|+++|.....+.......+........+ .+....+|+.......+-.++
T Consensus 2 ~pvp~~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i 54 (404)
T PRK11017 2 SPVPQSARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLL 54 (404)
T ss_pred CCCCHHHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 4467788865555544445555554444433 343446666666554444443
No 365
>PTZ00370 STEVOR; Provisional
Probab=25.71 E-value=2.4e+02 Score=25.37 Aligned_cols=27 Identities=0% Similarity=-0.041 Sum_probs=16.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCC
Q 012519 252 AGIFGPFVIFGLSGFLWVLVWLSATSS 278 (461)
Q Consensus 252 ~gwr~~f~~~~~~~~~~~~~~~~~~~~ 278 (461)
.+|-.+-++..+++++++++.+++.++
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrr 281 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRR 281 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356666666666666666666655443
No 366
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=25.63 E-value=6.1e+02 Score=24.44 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=28.4
Q ss_pred HHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 012519 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (461)
Q Consensus 197 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 245 (461)
++.|+..|........++.+...-++---+.++...+.-+|.++.++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 4445555545555555556665555555577777776666666665554
No 367
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=25.30 E-value=5.8e+02 Score=24.09 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=19.5
Q ss_pred HhhhHhhhhhhhhhcCCCchhHHHHHH
Q 012519 115 RVVMSVAIVPLSLAHGWSRSFSGIVQS 141 (461)
Q Consensus 115 ~~~~~~~~~~i~~~~~~s~~~~~~~~s 141 (461)
.-.....+....++++.++...|.+..
T Consensus 237 ae~lv~~le~~l~~~g~~~~F~G~iIa 263 (368)
T COG0387 237 AEILVGSLEAVLESLGAPPAFVGLIIA 263 (368)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 335555677788899999987777654
No 368
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=25.29 E-value=1.8e+02 Score=20.77 Aligned_cols=38 Identities=13% Similarity=0.046 Sum_probs=25.5
Q ss_pred HHHhHhhhhhhhhhhcc-------hHHHHHHHHHHHHHHHHhhcc
Q 012519 147 YLVSPIAGGTLVDYYGG-------KIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 147 ~~~~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~ 184 (461)
...+.+.++++.+|.-+ ++.+.++.++...+.+++++.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayq 75 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQ 75 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666544 677888888877777777765
No 369
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=25.14 E-value=4e+02 Score=26.74 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=26.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---chhHH
Q 012519 219 PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---IFGPF 258 (461)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~f 258 (461)
.+++||..+...-..+.+.+.++..+++.+...++ |+...
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~ 333 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKNS 333 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeehh
Confidence 35677777777777777777777777777665443 66543
No 370
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=24.98 E-value=2.5e+02 Score=19.80 Aligned_cols=49 Identities=10% Similarity=0.082 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH--hhcCchhHHHHHHHHHHHHHHH
Q 012519 223 RARAVAIAMGGFTSGNAIGLVLSPILM--SQAGIFGPFVIFGLSGFLWVLV 271 (461)
Q Consensus 223 r~~~~~~~~~~~~~G~~~g~~~~~~l~--~~~gwr~~f~~~~~~~~~~~~~ 271 (461)
+.....+......+...+|+.++..+. +-.||...|++.+=.+++..++
T Consensus 11 ~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fvi 61 (81)
T PF13937_consen 11 LRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVI 61 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHH
Confidence 334444444444444455566666663 2458999999976655554443
No 371
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=24.97 E-value=3.4e+02 Score=23.66 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhhhHhhcCcchhhhHHHHHHHhhHHHHHHHHHHhccChhHHHHHHHHHH
Q 012519 372 VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (461)
Q Consensus 372 ~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (461)
++.+|..+..++.||+.+. .....++....++.-.....++....+..+.++
T Consensus 14 G~~iG~~~~~~i~~~~~~~---------l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG 65 (226)
T PF04474_consen 14 GGLIGLLLGRRIPERIKDT---------LMQALGLCVLAIGISMALKGQNPLLVILSLVLG 65 (226)
T ss_pred HHHHHHHHcCCCCHHHHHH---------HHHHhhHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 3444444444455555433 455566666666655554455554444444443
No 372
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.74 E-value=1.8e+02 Score=20.21 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 012519 226 AVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (461)
Q Consensus 226 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 267 (461)
+--+.+....++.+++-++ |++.+. .+.++++.++..++
T Consensus 9 ae~l~~~il~~~~iisfi~-Gy~~q~--~~~~~~~~~~g~~~ 47 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIV-GYITQS--FSYTFYIYGAGVVL 47 (76)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHH
Confidence 3344455555555555444 444442 35556555544444
No 373
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=24.47 E-value=2.3e+02 Score=22.52 Aligned_cols=25 Identities=12% Similarity=-0.081 Sum_probs=19.1
Q ss_pred HHHhhcCchhhhHHHHHHHHHHHHH
Q 012519 213 MVARWFPQTERARAVAIAMGGFTSG 237 (461)
Q Consensus 213 ~i~~~~~~~~r~~~~~~~~~~~~~G 237 (461)
-+.|++|+..|..+.+.+.......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 3679999999988887776655543
No 374
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=24.10 E-value=3.2e+02 Score=20.71 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=27.7
Q ss_pred hhcCCCchhHHHHH-HHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhc
Q 012519 127 LAHGWSRSFSGIVQ-SSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (461)
Q Consensus 127 ~~~~~s~~~~~~~~-s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 183 (461)
...++++....+.. ..+.++..++....|+-.++-|--.-+..+.+-..+..++...
T Consensus 30 ~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~ 87 (116)
T PF12670_consen 30 YFTSLSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFL 87 (116)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666555543 3445555555555555544444444444454444444444333
No 375
>PRK10692 hypothetical protein; Provisional
Probab=23.94 E-value=1.8e+02 Score=20.64 Aligned_cols=10 Identities=0% Similarity=-0.094 Sum_probs=5.0
Q ss_pred HHHHHHHhhc
Q 012519 209 AMNNMVARWF 218 (461)
Q Consensus 209 ~~~~~i~~~~ 218 (461)
..++++++.+
T Consensus 25 igysi~~~i~ 34 (92)
T PRK10692 25 VGYSILNQLP 34 (92)
T ss_pred HHHHHHHhcc
Confidence 3445555554
No 376
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=23.81 E-value=3.8e+02 Score=23.07 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=17.7
Q ss_pred HHHHHhhHHHHHHHHHHhccChhHHHHHHHHHH
Q 012519 400 ILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (461)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (461)
.+-..++...+++.-......+....+...+++
T Consensus 34 l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G 66 (228)
T COG1811 34 LMQCLGLAILGIGIKMALQAKNDIMILLALVIG 66 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 444556666666655555556655444444443
No 377
>PRK15049 L-asparagine permease; Provisional
Probab=23.54 E-value=7.4e+02 Score=24.64 Aligned_cols=20 Identities=20% Similarity=0.326 Sum_probs=10.7
Q ss_pred CchhHHHHHHHHHHHHHHHH
Q 012519 253 GIFGPFVIFGLSGFLWVLVW 272 (461)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~ 272 (461)
+.|+...+.....++..+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~ 465 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGW 465 (499)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 46666666555544444444
No 378
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=23.44 E-value=5.5e+02 Score=27.09 Aligned_cols=109 Identities=19% Similarity=0.099 Sum_probs=58.6
Q ss_pred hcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHHHhhcCchhhhHHHHHHHHHHHHHHHH
Q 012519 161 YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (461)
Q Consensus 161 ~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 240 (461)
+|.|+..-+|.+...+|.+...--..++-+.=-..|+..|+..|. .....+|+..+|+ -+..+..-.+.+++...
T Consensus 1 ig~n~l~~iG~~~l~lG~~fl~kya~~~g~l~p~~Rv~~g~~~g~----~l~~~g~~l~~k~-~~~~~~~L~g~G~a~ly 75 (745)
T PF10101_consen 1 IGGNWLVRIGILVLLLGVVFLLKYAIDAGWLGPAVRVALGAALGL----ALLAAGERLRRKG-YRAFAQALAGGGIAVLY 75 (745)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHcCcCCHHHHHHHHHHHHH----HHHHHHHHHHHcc-cchHHHHHHHHHHHHHH
Confidence 366666667777776665543211114444445678888887664 3444667774332 14444444555555554
Q ss_pred HHHHHHH-HHhhcCchhHHHHHHHHHHHHHHHHHH
Q 012519 241 GLVLSPI-LMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (461)
Q Consensus 241 g~~~~~~-l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (461)
....++. +.+..+....|....++++....+...
T Consensus 76 ~t~~aa~~~y~l~~~~~af~~~~~v~~~~~~la~r 110 (745)
T PF10101_consen 76 LTVFAAYHLYGLIPPPVAFALLALVTAAAVALALR 110 (745)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 344455666666666655555544443
No 379
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=23.18 E-value=3.9e+02 Score=26.03 Aligned_cols=42 Identities=12% Similarity=0.073 Sum_probs=25.2
Q ss_pred hhhhhhhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchH
Q 012519 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI 165 (461)
Q Consensus 122 ~~~i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 165 (461)
...+-+.+|+++.-.|+.. ...|..+--++...+..|-|---
T Consensus 447 a~~iGeT~gIp~eIMGLTi--LAAGTSIPDlitSvIVARKGlGD 488 (588)
T KOG1307|consen 447 ANIIGETLGIPDEIMGLTI--LAAGTSIPDLITSVIVARKGLGD 488 (588)
T ss_pred HHHcccccCCCHHHhhhhh--hhcCCchHHhhHhhhhccccccc
Confidence 4556677888888777643 34455555556666666655433
No 380
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=22.47 E-value=3.5e+02 Score=20.46 Aligned_cols=17 Identities=18% Similarity=0.393 Sum_probs=6.6
Q ss_pred HhccChhHHHHHHHHHH
Q 012519 416 LTAAKSPVMASAWLTLA 432 (461)
Q Consensus 416 ~~~~~~~~~~~~~~~~~ 432 (461)
+.+.+..+....+++++
T Consensus 30 i~f~~~~~im~ifmllG 46 (114)
T PF11023_consen 30 IFFKASPIIMVIFMLLG 46 (114)
T ss_pred hhhcccHHHHHHHHHHH
Confidence 33334444333333333
No 381
>PRK03818 putative transporter; Validated
Probab=21.98 E-value=7.4e+02 Score=25.12 Aligned_cols=81 Identities=19% Similarity=0.057 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhchhhHHHHHH
Q 012519 135 FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (461)
Q Consensus 135 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 214 (461)
+.|+..-++.+|...+.-+..-+.+..|.+..+ ++.++..+..++..+.. ..+.-+=..+.+-.++.+...+...+++
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~G~~aG~~t~tp~l~~a 513 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILA-RMLAKMNYLTLCGMLAGSMTDPPALAFA 513 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHH-HHHHcCCHHHHHHHHhccCCCcHHHHHH
Confidence 467777777777777776666655555665544 44444433333222220 1111111223333455556677788888
Q ss_pred Hhh
Q 012519 215 ARW 217 (461)
Q Consensus 215 ~~~ 217 (461)
.|.
T Consensus 514 ~~~ 516 (552)
T PRK03818 514 NNL 516 (552)
T ss_pred hcc
Confidence 885
No 382
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=21.65 E-value=4.3e+02 Score=24.09 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=7.7
Q ss_pred chhhhHHHHHHHHHHHH
Q 012519 220 QTERARAVAIAMGGFTS 236 (461)
Q Consensus 220 ~~~r~~~~~~~~~~~~~ 236 (461)
+.+|.+..++-......
T Consensus 9 ~~er~k~~~~G~~vl~t 25 (301)
T PF14362_consen 9 PAERNKYAGIGAAVLFT 25 (301)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34555555444443333
No 383
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=21.60 E-value=1.2e+02 Score=19.71 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=18.2
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHh
Q 012519 252 AGIFGPFVIFGLSGFLWVLVWLSA 275 (461)
Q Consensus 252 ~gwr~~f~~~~~~~~~~~~~~~~~ 275 (461)
-|||...++.++++++.+.+.-..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~ 26 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIY 26 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhh
Confidence 379999999999888876654443
No 384
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=20.93 E-value=1.4e+02 Score=22.23 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=26.2
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhHhhc
Q 012519 360 RQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (461)
Q Consensus 360 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (461)
...|-.++..+...++.+++.++..|+....
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 4567788888888899999999999998765
No 385
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=20.93 E-value=2.9e+02 Score=24.83 Aligned_cols=122 Identities=10% Similarity=0.052 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhh-hhhhcCCCchhHHHHHHHHHHHHHHhHhhhh-hhhhhhcchHHHHHHHHHHHH
Q 012519 99 KVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALWSL 176 (461)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~i 176 (461)
....-+.+.+.+.-+-...-...++. +.+|++...+...++-.+..+.....+.+-. .--++...|.....|.+++..
T Consensus 201 v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwif 280 (412)
T KOG4830|consen 201 VQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIF 280 (412)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHH
Confidence 33344444455444433333334443 4456666666556655544444433333221 111122233345556666666
Q ss_pred HHHHhhccccccHH-HHHHHHHHHhhhhhchhhHHHHHHHhhcCch
Q 012519 177 ATFLTPWAADTSLL-ALLAMRAVVGLAEGVALPAMNNMVARWFPQT 221 (461)
Q Consensus 177 ~~~~~~~~~~~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 221 (461)
+....-+-+ +++- .+++..++.|++.+........+-++...++
T Consensus 281 cga~ilLlp-r~i~symyAisvfIGIAnAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 281 CGAVILLLP-RGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKN 325 (412)
T ss_pred hhhheeecc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 555544442 3332 3455678899999988877777777776543
No 386
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=20.55 E-value=6.2e+02 Score=23.77 Aligned_cols=63 Identities=14% Similarity=-0.141 Sum_probs=44.5
Q ss_pred hhhhhhhcCCC-chh----HHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcc
Q 012519 122 IVPLSLAHGWS-RSF----SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (461)
Q Consensus 122 ~~~i~~~~~~s-~~~----~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 184 (461)
.+...++++-+ +.+ ..|......+|..++..+.+++.|++|....+.++.+...++.+.+...
T Consensus 55 ~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 55 SPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 34444555433 333 3466777788888888888999999999998888888888887776655
No 387
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=20.41 E-value=4.9e+02 Score=21.43 Aligned_cols=85 Identities=15% Similarity=0.021 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccc-HHHHHHHHHHHhhhhhchhhHHHH
Q 012519 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS-LLALLAMRAVVGLAEGVALPAMNN 212 (461)
Q Consensus 134 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~-~~~l~~~r~l~G~~~g~~~~~~~~ 212 (461)
.+.|+..-++.+|...+.-+..-+.+. |-|. ++.+.++..++.+..... .. +--+=.....-.++.+...+....
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~--~~~~~~l~~~~~~G~~aGa~T~tp~L~ 131 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVI--GRYLFKLNPGIAAGILAGALTSTPALA 131 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHH--HHHHcCCCHHHHHHHHHccccCcHHHH
Confidence 467888888888888888777776665 5544 444444444444433222 11 000111122222334456677888
Q ss_pred HHHhhcCchh
Q 012519 213 MVARWFPQTE 222 (461)
Q Consensus 213 ~i~~~~~~~~ 222 (461)
...|...+.+
T Consensus 132 ~A~~~~~~~~ 141 (169)
T PF06826_consen 132 AAQEAISDSG 141 (169)
T ss_pred HHHHhhhcCC
Confidence 8888844333
No 388
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=20.31 E-value=6.6e+02 Score=22.84 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=19.7
Q ss_pred hHHHHhcchhhHHHHHHHHHHHHHHHHHHHhHH
Q 012519 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (461)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (461)
.++++.|+|+.+..................|.|
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 455788888777666655555444444444443
No 389
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=20.24 E-value=2.1e+02 Score=20.22 Aligned_cols=16 Identities=25% Similarity=0.212 Sum_probs=6.9
Q ss_pred chHHHHHHHHHHHHHH
Q 012519 163 GKIIMAWGVALWSLAT 178 (461)
Q Consensus 163 rr~~~~~~~~~~~i~~ 178 (461)
||...++|-.+++++.
T Consensus 3 Rk~a~~~GN~lMglGm 18 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGM 18 (89)
T ss_pred chhhHHHhhHHHHHhH
Confidence 3444444444444433
No 390
>PRK02935 hypothetical protein; Provisional
Probab=20.13 E-value=3.8e+02 Score=19.97 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=8.7
Q ss_pred HhhHHHHHHHHHHhccChhHHHH
Q 012519 404 IGFIAPGIALIGLTAAKSPVMAS 426 (461)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~ 426 (461)
..++...+..+...+..+.....
T Consensus 19 lvfiG~~vMy~Giff~~~~~~m~ 41 (110)
T PRK02935 19 LVFIGFIVMYLGIFFRESIIIMT 41 (110)
T ss_pred HHHHHHHHHHHHHHhcccHHHHH
Confidence 33333333333333433443333
No 391
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=20.06 E-value=7.8e+02 Score=23.63 Aligned_cols=97 Identities=18% Similarity=0.191 Sum_probs=58.7
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHhHhhhhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhhhhch
Q 012519 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (461)
Q Consensus 127 ~~~~~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 206 (461)
+..|.+.++...+.+...+...++.++-.+-.-++|.|..+..+.....++....... ...+...+.+-++.|+-.-..
T Consensus 21 ~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~-~~~~~~~~ga~~v~Gii~ill 99 (406)
T TIGR03173 21 GALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGA-GGGLGAIFGAVIVAGLFVILL 99 (406)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHH
Confidence 3468999988888888888888888887533335777766555554444443332222 134555555566666544332
Q ss_pred hhHHHHHHHhhcCchhhhH
Q 012519 207 LPAMNNMVARWFPQTERAR 225 (461)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~ 225 (461)
. .....+.+.+|+.-.|.
T Consensus 100 g-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 100 A-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred H-HHHHHHHHHCCcHHHHH
Confidence 2 34556778888655443
Done!