BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012520
(461 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0AAW4|YBHP_SHIFL Uncharacterized protein YbhP OS=Shigella flexneri GN=ybhP PE=4 SV=1
Length = 253
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 34/153 (22%)
Query: 194 IAEVLREVDADILSLQDVKAEEENDMKPL-------------------SDLAAALGMKYV 234
+ + +R V ADI+ LQ+V E + PL SD A G V
Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHE--VHPLHVENWPDTSHYEFLADTMWSDFA--YGRNAV 88
Query: 235 FAESWAPEYGNAILSKWPIKRWKVQKIA-DDKDFRNVLKATVDVPWAGE-VNVDSTQLDH 292
+ E +GNA+LS++PI+ ++ + ++ D + R VL + P G+ ++V L
Sbjct: 89 YPEG---HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG- 144
Query: 293 LNEKWRMKQICAIIQ-----SNDSPHILAGGLN 320
L E R Q+ + + + P ++AG N
Sbjct: 145 LREAHRQAQLAMLAEWVNELPDGEPVLVAGDFN 177
>sp|P0AAW1|YBHP_ECOLI Uncharacterized protein YbhP OS=Escherichia coli (strain K12)
GN=ybhP PE=4 SV=1
Length = 253
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 34/153 (22%)
Query: 194 IAEVLREVDADILSLQDVKAEEENDMKPL-------------------SDLAAALGMKYV 234
+ + +R V ADI+ LQ+V E + PL SD A G V
Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHE--VHPLHVENWPDTSHYEFLADTMWSDFA--YGRNAV 88
Query: 235 FAESWAPEYGNAILSKWPIKRWKVQKIA-DDKDFRNVLKATVDVPWAGE-VNVDSTQLDH 292
+ E +GNA+LS++PI+ ++ + ++ D + R VL + P G+ ++V L
Sbjct: 89 YPEG---HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG- 144
Query: 293 LNEKWRMKQICAIIQ-----SNDSPHILAGGLN 320
L E R Q+ + + + P ++AG N
Sbjct: 145 LREAHRQAQLAMLAEWVNELPDGEPVLVAGDFN 177
>sp|P0AAW2|YBHP_ECOL6 Uncharacterized protein YbhP OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ybhP PE=4 SV=1
Length = 253
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 34/153 (22%)
Query: 194 IAEVLREVDADILSLQDVKAEEENDMKPL-------------------SDLAAALGMKYV 234
+ + +R V ADI+ LQ+V E + PL SD A G V
Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHE--VHPLHVENWPDTSHYEFLADTMWSDFA--YGRNAV 88
Query: 235 FAESWAPEYGNAILSKWPIKRWKVQKIA-DDKDFRNVLKATVDVPWAGE-VNVDSTQLDH 292
+ E +GNA+LS++PI+ ++ + ++ D + R VL + P G+ ++V L
Sbjct: 89 YPEG---HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG- 144
Query: 293 LNEKWRMKQICAIIQ-----SNDSPHILAGGLN 320
L E R Q+ + + + P ++AG N
Sbjct: 145 LREAHRQAQLAMLAEWVNELPDGEPVLVAGDFN 177
>sp|P0AAW3|YBHP_ECO57 Uncharacterized protein YbhP OS=Escherichia coli O157:H7 GN=ybhP
PE=4 SV=1
Length = 253
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 34/153 (22%)
Query: 194 IAEVLREVDADILSLQDVKAEEENDMKPL-------------------SDLAAALGMKYV 234
+ + +R V ADI+ LQ+V E + PL SD A G V
Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHE--VHPLHVENWPDTSHYEFLADTMWSDFA--YGRNAV 88
Query: 235 FAESWAPEYGNAILSKWPIKRWKVQKIA-DDKDFRNVLKATVDVPWAGE-VNVDSTQLDH 292
+ E +GNA+LS++PI+ ++ + ++ D + R VL + P G+ ++V L
Sbjct: 89 YPEG---HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG- 144
Query: 293 LNEKWRMKQICAIIQ-----SNDSPHILAGGLN 320
L E R Q+ + + + P ++AG N
Sbjct: 145 LREAHRQAQLAMLAEWVNELPDGEPVLVAGDFN 177
>sp|Q46258|GP8D_CHLPS Virulence plasmid integrase pGP8-D OS=Chlamydophila psittaci PE=3
SV=1
Length = 335
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 152 VSINLPDNEISLANSNVLMRSPVCLPTSMMTWMEES----AKCSRSIAEVLREVDADILS 207
+S+ +P + +L N N+++ + +PT+++ W E + A C S+ + L V + I+S
Sbjct: 78 ISLKMPLQQFALLNHNIILDAIKQIPTTVVCWSEGTKQVRAACYISLTKFLNRVTSGIIS 137
Query: 208 LQDVKAEEEN-DMKPLSDLAAALGMKYV 234
+ +E N + DL M V
Sbjct: 138 IAQPSHQESNKTFYKIRDLVKTNAMNQV 165
>sp|P23176|AMYG_ASPKA Glucoamylase I OS=Aspergillus kawachii GN=gaI PE=1 SV=1
Length = 639
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 139 LSKQKTVSRSKLKVSINLPDNEISLANSNVLMRSPVC-LPTSMMTWMEESAKCSRSIAEV 197
LS + TV+R+ + +I +S A+S +++ SP P TW +S +++ ++
Sbjct: 31 LSNEATVARTAILNNIGADGAWVSGADSGIVVASPSTDNPDYFYTWTRDSGLVIKTLVDL 90
Query: 198 LREVDADILS 207
R D D+LS
Sbjct: 91 FRNGDTDLLS 100
>sp|P22832|AMYG_ASPSH Glucoamylase OS=Aspergillus shirousami GN=glaA PE=3 SV=1
Length = 639
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 139 LSKQKTVSRSKLKVSINLPDNEISLANSNVLMRSPVC-LPTSMMTWMEESAKCSRSIAEV 197
LS + TV+R+ + +I +S A+S +++ SP P TW +S +++ ++
Sbjct: 31 LSNEATVARTAILNNIGADGAWVSGADSGIVVASPSTDNPDYFYTWTRDSGIVLKTLVDL 90
Query: 198 LREVDADILS 207
R D D+LS
Sbjct: 91 FRNGDTDLLS 100
>sp|Q97PN8|Y1565_STRPN UPF0052 protein SP_1565 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=SP_1565 PE=1 SV=1
Length = 325
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 255 RWKVQKIADDKDFRNVLKATVDVPWAGEVNVDSTQLDHLNEKWRMKQICAIIQSNDSPHI 314
R +Q++ D RNVL A D+P E ++R + + ++
Sbjct: 46 RKNMQQLTPPGDLRNVLVAMSDMPKFYEKVF----------QYRFSEDAGAFAGHPLGNL 95
Query: 315 LAGGLNSLDGSDYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPV 373
+ GL+ + GS Y+A + + K++ GK P + L + + D E AGE V
Sbjct: 96 IIAGLSEMQGSTYNAMQLLS--KFFHTTGKIYPSSDHPLTLHAV-FQDGTEVAGESHIV 151
>sp|O94200|K6PF2_CANAX 6-phosphofructokinase subunit beta OS=Candida albicans GN=PFK2 PE=1
SV=1
Length = 946
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 281 GEVNVDSTQLDHLNEKW-RMKQICAIIQSNDSPHILAGGLNSLDGSDYSAERWMDIVKYY 339
G N+ + + E+W R+K +I + I+ GG SL G+D W +++
Sbjct: 248 GGTNIGTARCMEFKERWGRLKGCKNLIDAGIDGLIVCGGDGSLTGADLFRHEWPSLIQEL 307
Query: 340 EDIGKPT 346
+D G+ T
Sbjct: 308 KDKGEIT 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,415,162
Number of Sequences: 539616
Number of extensions: 6920477
Number of successful extensions: 17839
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 17830
Number of HSP's gapped (non-prelim): 23
length of query: 461
length of database: 191,569,459
effective HSP length: 121
effective length of query: 340
effective length of database: 126,275,923
effective search space: 42933813820
effective search space used: 42933813820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)