Query 012520
Match_columns 461
No_of_seqs 311 out of 1717
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:30:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012520.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012520hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11756 exonuclease III; Prov 100.0 4.5E-28 9.7E-33 238.8 17.3 232 188-430 12-268 (268)
2 COG3568 ElsH Metal-dependent h 99.9 1.6E-26 3.4E-31 222.9 18.0 214 187-431 26-258 (259)
3 COG0708 XthA Exonuclease III [ 99.9 1E-26 2.2E-31 224.7 12.0 231 183-430 7-261 (261)
4 PRK05421 hypothetical protein; 99.9 9.1E-24 2E-28 208.0 20.1 192 193-431 61-262 (263)
5 TIGR00633 xth exodeoxyribonucl 99.9 2.5E-23 5.5E-28 202.4 18.1 225 188-429 12-255 (255)
6 TIGR00195 exoDNase_III exodeox 99.9 4.3E-23 9.3E-28 201.7 18.6 223 188-428 12-254 (254)
7 PRK13911 exodeoxyribonuclease 99.9 1.1E-22 2.3E-27 198.7 18.9 219 189-428 13-249 (250)
8 TIGR03395 sphingomy sphingomye 99.9 3.2E-22 7E-27 198.8 19.4 138 187-326 21-193 (283)
9 PLN03144 Carbon catabolite rep 99.9 2.1E-21 4.5E-26 208.1 24.8 169 146-326 251-471 (606)
10 PTZ00297 pantothenate kinase; 99.8 1.2E-19 2.7E-24 211.6 24.8 223 191-432 30-316 (1452)
11 COG3021 Uncharacterized protei 99.8 9.7E-19 2.1E-23 171.8 11.7 202 187-431 99-308 (309)
12 PRK15251 cytolethal distending 99.8 3.4E-18 7.3E-23 166.5 14.1 206 176-426 28-268 (271)
13 KOG2756 Predicted Mg2+-depende 99.7 1.4E-17 2.9E-22 158.5 12.3 209 189-429 117-348 (349)
14 KOG3873 Sphingomyelinase famil 99.7 7.4E-18 1.6E-22 166.2 9.6 232 167-434 10-296 (422)
15 PF03372 Exo_endo_phos: Endonu 99.6 5.3E-16 1.1E-20 146.6 8.7 135 189-326 16-172 (249)
16 KOG2338 Transcriptional effect 99.6 1.3E-14 2.8E-19 149.4 16.2 168 149-326 116-308 (495)
17 smart00476 DNaseIc deoxyribonu 99.4 9.8E-12 2.1E-16 122.9 18.3 130 189-325 37-191 (276)
18 COG5239 CCR4 mRNA deadenylase, 99.3 1.6E-11 3.6E-16 122.0 12.9 259 149-435 30-370 (378)
19 smart00128 IPPc Inositol polyp 99.3 1.1E-10 2.3E-15 117.9 18.1 229 201-434 37-308 (310)
20 KOG0620 Glucose-repressible al 99.1 3.8E-10 8.2E-15 115.4 9.2 159 152-326 23-237 (361)
21 COG2374 Predicted extracellula 98.8 7.8E-08 1.7E-12 103.8 16.8 214 185-432 498-790 (798)
22 PF14529 Exo_endo_phos_2: Endo 98.7 8.4E-08 1.8E-12 82.0 9.4 117 283-425 1-119 (119)
23 KOG0566 Inositol-1,4,5-triphos 98.4 5.9E-06 1.3E-10 91.1 14.4 161 266-437 659-838 (1080)
24 KOG1294 Apurinic/apyrimidinic 98.2 5E-06 1.1E-10 84.2 9.3 221 194-430 82-335 (335)
25 PLN03191 Type I inositol-1,4,5 98.2 2E-05 4.2E-10 84.5 13.0 163 266-438 406-599 (621)
26 COG5411 Phosphatidylinositol 5 97.7 9.5E-05 2.1E-09 76.1 8.4 154 268-432 153-328 (460)
27 PTZ00312 inositol-1,4,5-tripho 92.2 0.39 8.5E-06 47.7 6.7 59 267-326 67-144 (356)
28 KOG1976 Inositol polyphosphate 81.5 2.1 4.6E-05 42.7 4.5 57 269-326 158-233 (391)
29 KOG0565 Inositol polyphosphate 61.1 23 0.0005 31.3 6.0 57 269-326 48-124 (145)
30 PF15451 DUF4632: Domain of un 26.4 46 0.001 25.2 1.7 23 7-29 33-57 (71)
31 KOG0808 Carbon-nitrogen hydrol 22.2 79 0.0017 31.2 2.9 27 188-214 99-125 (387)
No 1
>PRK11756 exonuclease III; Provisional
Probab=99.96 E-value=4.5e-28 Score=238.80 Aligned_cols=232 Identities=17% Similarity=0.142 Sum_probs=152.6
Q ss_pred HhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecCCCCeeEEEEEeccceeeEEEeccC--CC
Q 012520 188 AKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIAD--DK 265 (461)
Q Consensus 188 ~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~~~~~GvAIlSR~Pi~~~~~~~l~~--~~ 265 (461)
..+.++++++|++.+|||||||||+...... .+ .+....||.+.|. ...+.+|+|||||+|+...... ++. ..
T Consensus 12 ~~~~~~i~~~i~~~~pDIi~LQE~~~~~~~~--~~-~~~~~~gy~~~~~-~~~~~~GvailSr~p~~~~~~~-~~~~~~~ 86 (268)
T PRK11756 12 RARPHQLEAIIEKHQPDVIGLQETKVHDEMF--PL-EEVEALGYHVFYH-GQKGHYGVALLSKQTPIAVRKG-FPTDDEE 86 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecccccccC--CH-HHHHhcCCEEEEe-CCCCCCEEEEEECCChHHeEEC-CCCcccc
Confidence 4567889999999999999999997542211 12 2334578877665 3457899999999998755432 322 23
Q ss_pred CCceEEEEEEEcCCCcEEEEEEecCCCCC---H----HHHHHHHHHHH---h---cCCCCEEEEecCCCCCCCCChhh-H
Q 012520 266 DFRNVLKATVDVPWAGEVNVDSTQLDHLN---E----KWRMKQICAII---Q---SNDSPHILAGGLNSLDGSDYSAE-R 331 (461)
Q Consensus 266 ~~R~~i~a~i~l~gg~~v~v~ntHL~~~~---~----~~R~~Ql~~Ll---~---~~~~PvIL~GDFNs~~~s~~~~~-~ 331 (461)
+.+.++.+++..+++ .+.|+|+|++... . ..|.+++..|. + ..+.|+|||||||..+.+.+... .
T Consensus 87 ~~~r~l~~~i~~~~g-~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~ 165 (268)
T PRK11756 87 AQRRIIMATIPTPNG-NLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGE 165 (268)
T ss_pred ccCCEEEEEEEcCCC-CEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcc
Confidence 457799999998774 5999999996531 1 13445555443 2 23679999999999887542110 0
Q ss_pred HHHHHHhh--hhcCCCChhHHHHHHHhcCCceeeecccCCC---CceEeecCCccccCCCCCCCceEEEEECCCCCCcee
Q 012520 332 WMDIVKYY--EDIGKPTPRVEVMKLLKGIEYVDSKEFAGEC---EPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFV 406 (461)
Q Consensus 332 ~~~i~~~~--~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~---~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~ 406 (461)
+. ....+ ...+-..++++.++.|.+.||+|+|+..++. .+|+|.+.+.. ...+.++||||||+++.+. -.
T Consensus 166 ~~-~~~~~~~~~~~~~~~er~~~~~l~~~~l~D~~R~~~p~~~~~~T~~~~~~~~--~~~~~g~RIDyi~~s~~~~--~~ 240 (268)
T PRK11756 166 EN-RKRWLRTGKCSFLPEEREWLDRLMDWGLVDTFRQLNPDVNDRFSWFDYRSKG--FDDNRGLRIDLILATQPLA--ER 240 (268)
T ss_pred cC-hHHhcccCCccCCHHHHHHHHHHHhCCcEeehhhhCCCCCCcccCcCCcccc--cccCCceEEEEEEeCHHHH--hh
Confidence 00 00000 0111223346677777778999999988764 24656554421 1124689999999999854 23
Q ss_pred eeEEEEcCC----CCCCCccceEEEEEe
Q 012520 407 PGSYSVISS----KGTSDHHIVKVDVTK 430 (461)
Q Consensus 407 v~s~~vi~~----~~~SDH~PV~ad~~l 430 (461)
+.++.+... .++|||+||+++|.+
T Consensus 241 v~~~~i~~~~~~~~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 241 CVETGIDYDIRGMEKPSDHAPIWATFKL 268 (268)
T ss_pred heEeEEeHHHhCCCCCCCcccEEEEEeC
Confidence 667776532 247999999999974
No 2
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.94 E-value=1.6e-26 Score=222.88 Aligned_cols=214 Identities=24% Similarity=0.252 Sum_probs=154.7
Q ss_pred hHhhHHHHHHHHHccCCcEEEEcCccCCc----cCCcchHHHHHHHhCCcEEEEec------CCCCeeEEEEEeccceee
Q 012520 187 SAKCSRSIAEVLREVDADILSLQDVKAEE----ENDMKPLSDLAAALGMKYVFAES------WAPEYGNAILSKWPIKRW 256 (461)
Q Consensus 187 ~~~~~~~i~~~I~~~~pDVV~LQEv~~~~----~~~~~~l~~L~~~~g~~~~f~~~------~~~~~GvAIlSR~Pi~~~ 256 (461)
++.+.+++++.|++.++|||||||++... ....++...+.+..+.+|.+... ..+.+|++|||++|+...
T Consensus 26 ~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~GnaiLS~~pi~~v 105 (259)
T COG3568 26 RRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGLAPYWWSGAAFGAVYGEGQHGNAILSRLPIRDV 105 (259)
T ss_pred ceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcCCccccchhhhhhhcccceeeeEEEecCcccch
Confidence 45688999999999999999999999632 22233444555555555544322 236899999999999999
Q ss_pred EEEeccC--CCCCceEEEEEEEcCCCcEEEEEEecCCCCCHHHHHHHHHHHHhc----CCCCEEEEecCCCCCCCCChhh
Q 012520 257 KVQKIAD--DKDFRNVLKATVDVPWAGEVNVDSTQLDHLNEKWRMKQICAIIQS----NDSPHILAGGLNSLDGSDYSAE 330 (461)
Q Consensus 257 ~~~~l~~--~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~~~~R~~Ql~~Ll~~----~~~PvIL~GDFNs~~~s~~~~~ 330 (461)
....++. +.++|+++++.++.++|++|.|+|+||+ ..+..|.+|++.|++. ...|+|+|||||..+++.
T Consensus 106 ~~~~lp~~~~~~~Rgal~a~~~~~~g~~l~V~~~HL~-l~~~~R~~Q~~~L~~~~~l~~~~p~vl~GDFN~~p~s~---- 180 (259)
T COG3568 106 ENLALPDPTGLEPRGALLAEIELPGGKPLRVINAHLG-LSEESRLRQAAALLALAGLPALNPTVLMGDFNNEPGSA---- 180 (259)
T ss_pred hhccCCCCCCCCCceeEEEEEEcCCCCEEEEEEEecc-ccHHHHHHHHHHHHhhccCcccCceEEEccCCCCCCCc----
Confidence 8888875 5689999999999987689999999999 7999999999999873 235999999999999986
Q ss_pred HHHHHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCCCceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEE
Q 012520 331 RWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSY 410 (461)
Q Consensus 331 ~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~ 410 (461)
.|+...+.. +. ...++++.+.-+++..--+| +...+..+|||||++++ +.+.++
T Consensus 181 ~yr~~~~~~------------~~--~~~~~~~~~~~a~~~~~~tf--------ps~~p~lriD~Ifvs~~----~~i~~~ 234 (259)
T COG3568 181 EYRLAARSP------------LN--AQAALTGAFAPAVGRTIRTF--------PSNTPLLRLDRIFVSKE----LAIRSV 234 (259)
T ss_pred cceeccCCc------------hh--hccccccccCcccCcccCCC--------CCCCccccccEEEecCc----ccEEEE
Confidence 343211110 00 02234444432221100122 33345679999999998 677788
Q ss_pred EEcCCC---CCCCccceEEEEEec
Q 012520 411 SVISSK---GTSDHHIVKVDVTKV 431 (461)
Q Consensus 411 ~vi~~~---~~SDH~PV~ad~~l~ 431 (461)
+++... ..|||+||.+++.++
T Consensus 235 ~v~~~~~a~~aSDHlPl~aeL~~~ 258 (259)
T COG3568 235 HVLTDRLARVASDHLPLLAELRLK 258 (259)
T ss_pred EeecCCCccccccccceEEEEecC
Confidence 887654 389999999999875
No 3
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=99.94 E-value=1e-26 Score=224.67 Aligned_cols=231 Identities=22% Similarity=0.220 Sum_probs=156.9
Q ss_pred cccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecCCCCeeEEEEEeccceeeEEEecc
Q 012520 183 WMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIA 262 (461)
Q Consensus 183 ~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~~~~~GvAIlSR~Pi~~~~~~~l~ 262 (461)
|+++-+.++..+.+++.+.+||||||||++....... ...+ +..||+.++.....++.||||+||.++...... ++
T Consensus 7 NVNgiRar~~~~~~~l~~~~pDVlclQEtK~~~~~fp--~~~~-~~~GY~~~~~~gqKgysGVailsr~~~~~v~~g-~~ 82 (261)
T COG0708 7 NVNGLRARLKKLLDWLEEEQPDVLCLQETKAQDEQFP--REEL-EALGYHHVFNHGQKGYSGVAILSKKPPDDVRRG-FP 82 (261)
T ss_pred ehhhHHHHHHHHHHHHHHhCCCEEEEEecccCcccCC--HhHH-hhCCceEEEecCcCCcceEEEEEccCchhhhcC-CC
Confidence 3444567888899999999999999999988744332 1233 367996665555689999999999887744332 22
Q ss_pred C----CCCCceEEEEEEEcCCCcEEEEEEecCCCCCH--H----HHHHHHHHHHh------cCCCCEEEEecCCCCCCCC
Q 012520 263 D----DKDFRNVLKATVDVPWAGEVNVDSTQLDHLNE--K----WRMKQICAIIQ------SNDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 263 ~----~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~~--~----~R~~Ql~~Ll~------~~~~PvIL~GDFNs~~~s~ 326 (461)
. +.+.| +|.+++. .|.|+|++++...+ . .++.-+..+.. ..+.|+|+|||||..+...
T Consensus 83 ~~~~~d~e~R-~I~a~~~-----~~~v~~~Y~PnG~~~~~~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~i 156 (261)
T COG0708 83 GEEEDDEEGR-VIEAEFD-----GFRVINLYFPNGSSIGLEKFDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEI 156 (261)
T ss_pred CCccccccCc-EEEEEEC-----CEEEEEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcCCCEEEecccccCCchh
Confidence 2 33456 7777774 29999999876332 2 22222223321 2468999999999998875
Q ss_pred ChhhHHHHHHHh--hhhcCCCChhHHHHHHHhcCCceeeecccCC--CCceEeecCCccccCCCCCCCceEEEEECCCCC
Q 012520 327 YSAERWMDIVKY--YEDIGKPTPRVEVMKLLKGIEYVDSKEFAGE--CEPVVIIAKGQNVQGTCKYGTRVDYILASPDSP 402 (461)
Q Consensus 327 ~~~~~~~~i~~~--~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~--~~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~ 402 (461)
+.. .++ ..+ -...+...++++.++.|.+.||+|+++..++ ..+|+|++....+. . +.|+|||||++|+.+.
T Consensus 157 Dv~-~~~--~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p~~~~YTwW~YR~~~~~-~-n~G~RID~~l~S~~L~ 231 (261)
T COG0708 157 DVA-NPK--KRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHPEPEKYTWWDYRANAAR-R-NRGWRIDYILVSPALA 231 (261)
T ss_pred ccc-Cch--hhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhhCCCCCcccccccccchhh-h-cCceeEEEEEeCHHHH
Confidence 311 110 111 1222334456888998889999999998765 33788988765322 2 2799999999999875
Q ss_pred CceeeeEEEEcCCCC----CCCccceEEEEEe
Q 012520 403 YKFVPGSYSVISSKG----TSDHHIVKVDVTK 430 (461)
Q Consensus 403 ~~~~v~s~~vi~~~~----~SDH~PV~ad~~l 430 (461)
. .+.++.+..+.. +|||+||+++|.+
T Consensus 232 ~--~~~~a~I~~~~rg~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 232 D--RLKDAGIDREVRGWEKPSDHAPVWVELDL 261 (261)
T ss_pred H--HHHhcCccHHHhcCCCCCCcCcEEEEecC
Confidence 3 345767665444 4999999999864
No 4
>PRK05421 hypothetical protein; Provisional
Probab=99.92 E-value=9.1e-24 Score=207.97 Aligned_cols=192 Identities=18% Similarity=0.176 Sum_probs=127.7
Q ss_pred HHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEec---CCCCeeEEEEEeccceeeEEEeccC--CCCC
Q 012520 193 SIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAES---WAPEYGNAILSKWPIKRWKVQKIAD--DKDF 267 (461)
Q Consensus 193 ~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~---~~~~~GvAIlSR~Pi~~~~~~~l~~--~~~~ 267 (461)
...+.+ +.+|||||||||+... .+..+....++.+.|... .++.||++||||+|+.......... ...+
T Consensus 61 ~~l~~l-~~~~DiI~LQEv~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~GvaiLSR~pi~~~~~~~~~~~~~~~~ 134 (263)
T PRK05421 61 SVLKNL-GKDADLVLLQEAQTTP-----ELVQFATANYLAADQAPAFVLPQHPSGVMTLSKAHPVYCCPLREREPWLRLP 134 (263)
T ss_pred HHHHHh-ccCCCEEEEEecccCc-----chHHHhhcccchHHhccccccCCCccceeEeeecccceeeccCCCCccccCc
Confidence 444444 8999999999997642 123444455565545433 3468999999999998654432111 2356
Q ss_pred ceEEEEEEEcCCCcEEEEEEecCCCC--CHHHHHHHHHHHHh---cCCCCEEEEecCCCCCCCCChhhHHHHHHHhhhhc
Q 012520 268 RNVLKATVDVPWAGEVNVDSTQLDHL--NEKWRMKQICAIIQ---SNDSPHILAGGLNSLDGSDYSAERWMDIVKYYEDI 342 (461)
Q Consensus 268 R~~i~a~i~l~gg~~v~v~ntHL~~~--~~~~R~~Ql~~Ll~---~~~~PvIL~GDFNs~~~s~~~~~~~~~i~~~~~~~ 342 (461)
|.++.+++++++|+.+.|+|+|+.+. ....|..|++.|.+ ....|+|+|||||+.++... ..+.
T Consensus 135 r~~l~a~~~~~~g~~l~v~ntHl~~~~~~~~~r~~q~~~l~~~~~~~~~p~Il~GDFN~~~~~~~--~~l~--------- 203 (263)
T PRK05421 135 KSALITEYPLPNGRTLLVVNIHAINFSLGVDVYSKQLEPIGDQIAHHSGPVILAGDFNTWSRKRM--NALK--------- 203 (263)
T ss_pred ceeEEEEEEeCCCCEEEEEEECccccCcChHHHHHHHHHHHHHHHhCCCCEEEEcccccCcccch--HHHH---------
Confidence 88999999998878899999999753 45678888877754 34679999999998664320 0111
Q ss_pred CCCChhHHHHHHHhcCCceeeecccCCCCceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEEEEcCCCCCCCcc
Q 012520 343 GKPTPRVEVMKLLKGIEYVDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYSVISSKGTSDHH 422 (461)
Q Consensus 343 ~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi~~~~~SDH~ 422 (461)
+.+...|+.|+. |+...+ ......+|||||++ + +.+.++++++. ..|||+
T Consensus 204 ----------~~~~~~~l~~~~----------~~~~~~----~~~~~~~ID~I~~~-~----~~v~~~~v~~~-~~SDH~ 253 (263)
T PRK05421 204 ----------RFARELGLKEVR----------FTDDQR----RRAFGRPLDFVFYR-G----LNVSKASVLVT-RASDHN 253 (263)
T ss_pred ----------HHHHHcCCCccC----------cCCccc----ccccCCCcceEEEC-C----cEEEEEEcCCC-CCCCcc
Confidence 111223444321 111110 01125799999995 4 67888888864 799999
Q ss_pred ceEEEEEec
Q 012520 423 IVKVDVTKV 431 (461)
Q Consensus 423 PV~ad~~l~ 431 (461)
||+++|.+.
T Consensus 254 Pv~a~l~l~ 262 (263)
T PRK05421 254 PLLVEFSLK 262 (263)
T ss_pred CEEEEEEec
Confidence 999999875
No 5
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.91 E-value=2.5e-23 Score=202.38 Aligned_cols=225 Identities=20% Similarity=0.150 Sum_probs=137.5
Q ss_pred HhhHHHH-HHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecC-CCCeeEEEEEeccceeeEE-EeccC-
Q 012520 188 AKCSRSI-AEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESW-APEYGNAILSKWPIKRWKV-QKIAD- 263 (461)
Q Consensus 188 ~~~~~~i-~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~-~~~~GvAIlSR~Pi~~~~~-~~l~~- 263 (461)
..+.+++ +++|++.+||||||||++..... ....+....||.+.|.... .+.+|++|+||+|+..... .....
T Consensus 12 ~~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~G~ailsr~~~~~~~~~~~~~~~ 88 (255)
T TIGR00633 12 RARLHKLFLDWLKEEQPDVLCLQETKVADEQ---FPAELFEELGYHVFFHGAKSKGYSGVAILSKVEPLDVRYGFGGEEH 88 (255)
T ss_pred HHHhhccHHHHHHhcCCCEEEEEeccCchhh---CCHhHhccCCceEEEeecccCCcceEEEEEcCCcceEEECCCCCcc
Confidence 3455666 99999999999999999865311 1123444678877776444 3778999999999875543 11111
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEEecCCCCC------HHHHHHHHHHHHh------cCCCCEEEEecCCCCCCCCChhhH
Q 012520 264 DKDFRNVLKATVDVPWAGEVNVDSTQLDHLN------EKWRMKQICAIIQ------SNDSPHILAGGLNSLDGSDYSAER 331 (461)
Q Consensus 264 ~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~------~~~R~~Ql~~Ll~------~~~~PvIL~GDFNs~~~s~~~~~~ 331 (461)
+.+.| .+.+.+ +.+.|+++|+++.+ ...|..+++.+.+ ..+.|+|+|||||+.+...+
T Consensus 89 ~~~~r-~l~~~~-----~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~Il~GDFN~~~~~~d---- 158 (255)
T TIGR00633 89 DEEGR-VITAEF-----DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYEKELDAGKPVIICGDMNVAHTEID---- 158 (255)
T ss_pred cCCCc-EEEEEE-----CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChHH----
Confidence 23344 443333 35899999986533 1346666655532 13679999999999875421
Q ss_pred HHHHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCC---CceEeecCCccccCCCCCCCceEEEEECCCCCCceeee
Q 012520 332 WMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGEC---EPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPG 408 (461)
Q Consensus 332 ~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~---~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~ 408 (461)
+.......+..+...+....++.+.+.||.|+|+..++. .+|+|...+.. .....+.||||||+++++.. .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~~~~T~~~~~~~~--~~~~~~~rID~i~~s~~~~~--~~~ 234 (255)
T TIGR00633 159 LGNPKENKGNAGFTPEEREWFDELLEAGLVDTFRHFNPDTEGAYTWWDYRSGA--RDRNRGWRIDYFLVSEPLAE--RVV 234 (255)
T ss_pred ccChhhcCCCCCcCHHHHHHHHHHHHcCCEecchhhCCCCCCcCcCcCCccCc--cccCCceEEEEEEECHHHHh--hhc
Confidence 000000011111111223456655568999999877654 34555433210 12235789999999997432 245
Q ss_pred EEEEcCCCCCCCccceEEEEE
Q 012520 409 SYSVISSKGTSDHHIVKVDVT 429 (461)
Q Consensus 409 s~~vi~~~~~SDH~PV~ad~~ 429 (461)
++.+.....+|||+||+++|+
T Consensus 235 ~~~i~~~~~~SDH~pv~~~~~ 255 (255)
T TIGR00633 235 DSYIDSEIRGSDHCPIVLELD 255 (255)
T ss_pred EeEECCCCCCCCcccEEEEEC
Confidence 666654445799999999973
No 6
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=99.90 E-value=4.3e-23 Score=201.69 Aligned_cols=223 Identities=17% Similarity=0.102 Sum_probs=137.7
Q ss_pred HhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecCCCCeeEEEEEeccceeeEE-EeccC-CC
Q 012520 188 AKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESWAPEYGNAILSKWPIKRWKV-QKIAD-DK 265 (461)
Q Consensus 188 ~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~~~~~GvAIlSR~Pi~~~~~-~~l~~-~~ 265 (461)
..+..++.++|++.+||||||||++..... ....+....||.+.+... .+.+|++|+||.+...... ..... +.
T Consensus 12 ~~~~~~~~~~l~~~~~DIi~LQE~~~~~~~---~~~~~~~~~g~~~~~~~~-~g~~Gvailsr~~~~~~~~~~~~~~~~~ 87 (254)
T TIGR00195 12 RARLHKGLAWLKENQPDVLCLQETKVQDEQ---FPLEPFHKEGYHVFFSGQ-KGYSGVAIFSKEEPLSVRRGFGVEEEDA 87 (254)
T ss_pred HHhHHHHHHHHHhcCCCEEEEEecccchhh---CCHHHhhcCCcEEEEecC-CCcceEEEEEcCCcceEEECCCCccccc
Confidence 345667899999999999999999765221 123444557886666543 6788999999954433222 11111 23
Q ss_pred CCceEEEEEEEcCCCcEEEEEEecCCCCC------HHHHHHHHHHHHh---c---CCCCEEEEecCCCCCCCCChhhHHH
Q 012520 266 DFRNVLKATVDVPWAGEVNVDSTQLDHLN------EKWRMKQICAIIQ---S---NDSPHILAGGLNSLDGSDYSAERWM 333 (461)
Q Consensus 266 ~~R~~i~a~i~l~gg~~v~v~ntHL~~~~------~~~R~~Ql~~Ll~---~---~~~PvIL~GDFNs~~~s~~~~~~~~ 333 (461)
+.| ++.+.+ . .+.|+|+|.++.+ ...|..+++.|.+ . .+.|+|+|||||..+...+. +.
T Consensus 88 ~~r-~i~~~~--~---~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~---~~ 158 (254)
T TIGR00195 88 EGR-IIMAEF--D---SFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLEKLVDKDKPVLICGDMNIAPTEIDL---HS 158 (254)
T ss_pred CCC-EEEEEE--C---CEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccCCChhhc---cC
Confidence 455 555555 2 3889999998621 2345555555533 2 25799999999998875321 00
Q ss_pred HHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCC--CceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEEE
Q 012520 334 DIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGEC--EPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYS 411 (461)
Q Consensus 334 ~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~--~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~ 411 (461)
.....+..+...++.+.++.+.+.||+|+|+..++. .+|+|...... .....+.||||||+++++.. .+.++.
T Consensus 159 -~~~~~~~~~~~~~e~~~~~~l~~~~l~D~~r~~~~~~~~~T~~~~~~~~--~~~~~g~RID~i~~s~~~~~--~v~~~~ 233 (254)
T TIGR00195 159 -PDENRNHTGFLPEEREWLDRLLEAGLVDTFRKFNPDEGAYSWWDYRTKA--RDRNRGWRIDYFLVSEPLKE--RCVDCG 233 (254)
T ss_pred -hhhcCCCcCcChHHHHHHHHHHHcCCEeeecccCCCCCCCcccCCcCCc--cccCCceEEEEEEECHHHHh--hhhEEE
Confidence 011111112222344566666667899999866543 34555433221 12245789999999998532 256777
Q ss_pred EcC---C-CCCCCccceEEEE
Q 012520 412 VIS---S-KGTSDHHIVKVDV 428 (461)
Q Consensus 412 vi~---~-~~~SDH~PV~ad~ 428 (461)
+.. . .++|||+||+++|
T Consensus 234 i~~~~~~~~~~SDH~Pv~~~~ 254 (254)
T TIGR00195 234 IDYDIRGSEKPSDHCPVVLEF 254 (254)
T ss_pred EcHHHhcCCCCCCcccEEEeC
Confidence 654 2 3679999999985
No 7
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=99.90 E-value=1.1e-22 Score=198.75 Aligned_cols=219 Identities=17% Similarity=0.146 Sum_probs=140.5
Q ss_pred hhH-HHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEe-cCCCCeeEEEEEeccceeeEEEecc--C-
Q 012520 189 KCS-RSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAE-SWAPEYGNAILSKWPIKRWKVQKIA--D- 263 (461)
Q Consensus 189 ~~~-~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~-~~~~~~GvAIlSR~Pi~~~~~~~l~--~- 263 (461)
.+. ..+.++|.+++||||||||++...... .+ ...||..++.. ...++.|+||++|.++..... .+. .
T Consensus 13 ~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~-----~~-~~~gY~~~~~~~~~kgy~GVAi~~k~~~~~v~~-~~~~~~~ 85 (250)
T PRK13911 13 ACMTKGFMDFFNSVDADVFCIQESKMQQEQN-----TF-EFKGYFDFWNCAIKKGYSGVVTFTKKEPLSVSY-GINIEEH 85 (250)
T ss_pred HhhhhhHHHHHHhcCCCEEEEEeeccccccc-----cc-ccCCceEEEEecccCccceEEEEEcCCchheEE-cCCCCcc
Confidence 344 358999999999999999998764321 11 24577644432 245788999999977544322 222 1
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEEecCCCCC-HHHH----H---HHHHHHHhc--CCCCEEEEecCCCCCCCCChhhHHH
Q 012520 264 DKDFRNVLKATVDVPWAGEVNVDSTQLDHLN-EKWR----M---KQICAIIQS--NDSPHILAGGLNSLDGSDYSAERWM 333 (461)
Q Consensus 264 ~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~-~~~R----~---~Ql~~Ll~~--~~~PvIL~GDFNs~~~s~~~~~~~~ 333 (461)
+.++| +|.+.+ + .+.|+|++.++.. ..+| . ..+...++. .+.|+|+|||||..+...+.. .+.
T Consensus 86 d~eGR-~I~~~~--~---~~~l~nvY~Pn~~~~~~r~~~K~~~~~~~~~~l~~l~~~~~~Ii~GD~Nva~~~~D~~-~~~ 158 (250)
T PRK13911 86 DKEGR-VITCEF--E---SFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLE-NPK 158 (250)
T ss_pred cccCC-EEEEEE--C---CEEEEEEEecCCCCCCcchHHHHHHHHHHHHHHHhcccCCCEEEEccccCCCChhhcc-Chh
Confidence 34566 556655 2 4899999987632 1112 2 222233332 247999999999988764321 111
Q ss_pred HHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCC---CceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEE
Q 012520 334 DIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGEC---EPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSY 410 (461)
Q Consensus 334 ~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~---~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~ 410 (461)
..-...+...++++.++.+...||+|+++..++. .+|+|++.+.. .....++||||||+|+.+. ..+.++
T Consensus 159 ---~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~~~~~yTww~~~~~~--~~~n~g~RIDyilvs~~~~--~~~~~~ 231 (250)
T PRK13911 159 ---TNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQA--RDKNIGWRIDYFLCSNPLK--TRLKDA 231 (250)
T ss_pred ---hcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCCCCCCCccCCCcCCc--cccCCcceEEEEEEChHHh--hhEEEE
Confidence 1111223233456777777778999999987664 35777755432 2235689999999999865 345566
Q ss_pred EEcCCCCCCCccceEEEE
Q 012520 411 SVISSKGTSDHHIVKVDV 428 (461)
Q Consensus 411 ~vi~~~~~SDH~PV~ad~ 428 (461)
.+.....+|||+||+++|
T Consensus 232 ~i~~~~~~SDH~Pv~~~~ 249 (250)
T PRK13911 232 LIYKDILGSDHCPVGLEL 249 (250)
T ss_pred EECCCCCCCCcccEEEEe
Confidence 676666789999999987
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.89 E-value=3.2e-22 Score=198.83 Aligned_cols=138 Identities=20% Similarity=0.204 Sum_probs=99.8
Q ss_pred hHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEE-Eec--------------CCCCeeEEEEEec
Q 012520 187 SAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVF-AES--------------WAPEYGNAILSKW 251 (461)
Q Consensus 187 ~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f-~~~--------------~~~~~GvAIlSR~ 251 (461)
...|.+.|++.+...+|||||||||..... ...+++.|+..++|...+ +.. ....+|++||||+
T Consensus 21 ~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~-~~~l~~~L~~~yp~~~~~~g~~~~g~~~~~g~~~~~~~~~~G~~iLSr~ 99 (283)
T TIGR03395 21 QMERADLIASADYIKNQDVVILNEAFDTSA-SKRLLDNLREEYPYQTDVIGRSKKGWDKTLGNYSSSALEDGGVAIVSKW 99 (283)
T ss_pred HhHHHHHHHHhhcccCCCEEEEecccchHH-HHHHHHHHHhhCCceEeecccccccchhccccccccCccCCEEEEEECC
Confidence 357889999999999999999999965411 111334555544432211 110 1246799999999
Q ss_pred cceeeEEEeccCC-----CCCceEEEEEEEcCCCcEEEEEEecCCCCC--------HHHHHHHHHHHHhcC-------CC
Q 012520 252 PIKRWKVQKIADD-----KDFRNVLKATVDVPWAGEVNVDSTQLDHLN--------EKWRMKQICAIIQSN-------DS 311 (461)
Q Consensus 252 Pi~~~~~~~l~~~-----~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~--------~~~R~~Ql~~Ll~~~-------~~ 311 (461)
||.......++.. ...|+++.++++.+| ..+.|++|||.+.. ...|..|++.|.+.. +.
T Consensus 100 Pi~~~~~~~f~~~~~~d~~~~kg~l~a~i~~~g-~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~ 178 (283)
T TIGR03395 100 PIEEKIQYIFNKGCGADNLSNKGFAYVKINKNG-KKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDE 178 (283)
T ss_pred CccccEEEEccCCCCCccccCCceEEEEEecCC-eEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCc
Confidence 9988766655432 236889999999877 89999999998631 578999998886532 46
Q ss_pred CEEEEecCCCCCCCC
Q 012520 312 PHILAGGLNSLDGSD 326 (461)
Q Consensus 312 PvIL~GDFNs~~~s~ 326 (461)
|+||+||||..+++.
T Consensus 179 pvIl~GDfN~~~~s~ 193 (283)
T TIGR03395 179 TVLIGGDLNVNKGSN 193 (283)
T ss_pred eEEEEeeCCCCCCCH
Confidence 899999999998875
No 9
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.89 E-value=2.1e-21 Score=208.15 Aligned_cols=169 Identities=17% Similarity=0.201 Sum_probs=112.2
Q ss_pred CCCccE-EeeecCCCceeeeeccccccCCccCCccccccccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHH
Q 012520 146 SRSKLK-VSINLPDNEISLANSNVLMRSPVCLPTSMMTWMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSD 224 (461)
Q Consensus 146 ~~~~~~-vs~n~~~~~isl~~~~~~~~n~~c~~~~~~~~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~ 224 (461)
....++ +|||++++. ++.. ...++|.++.+. |..|.+.|+++|..++|||||||||.... ..+.+..
T Consensus 251 ~~~~frVmSYNILAd~--ya~~---dly~ycp~~aL~-----W~yRk~lIl~EI~~~~aDIICLQEV~~~~--~~d~~~p 318 (606)
T PLN03144 251 SAGTFTVLSYNILSDL--YATS---DMYSYCPPWALS-----WTYRRQNLLREIVGYRADILCLQEVQSDH--FEEFFAP 318 (606)
T ss_pred CCCCEEEEEeeecccc--ccCc---ccccCCCccccC-----HHHHHHHHHHHHHhcCCCEEEEeecCHHH--HHHHHHh
Confidence 345676 899998874 3322 234577776653 46789999999999999999999996541 1122232
Q ss_pred HHHHhCCcEEEEecCC--------CCeeEEEEEe---ccceeeEEEeccC-------C---------CCCc-----eEEE
Q 012520 225 LAAALGMKYVFAESWA--------PEYGNAILSK---WPIKRWKVQKIAD-------D---------KDFR-----NVLK 272 (461)
Q Consensus 225 L~~~~g~~~~f~~~~~--------~~~GvAIlSR---~Pi~~~~~~~l~~-------~---------~~~R-----~~i~ 272 (461)
.....||...|....+ ...|+||+.| |.+.....+.+.. . ...| .+++
T Consensus 319 ~L~~~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAli 398 (606)
T PLN03144 319 ELDKHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALI 398 (606)
T ss_pred hhhhcCceEEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEE
Confidence 2245688777764321 3569999976 6666544332210 0 1123 4566
Q ss_pred EEEEcC---------C-CcEEEEEEecCCCC--CHHHHHHHHHHHHhc-------CCCCEEEEecCCCCCCCC
Q 012520 273 ATVDVP---------W-AGEVNVDSTQLDHL--NEKWRMKQICAIIQS-------NDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 273 a~i~l~---------g-g~~v~v~ntHL~~~--~~~~R~~Ql~~Ll~~-------~~~PvIL~GDFNs~~~s~ 326 (461)
+.++.. + ++.|.|+||||.+. ..+.|..|+..|++. .+.|+|||||||+.|++.
T Consensus 399 v~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~dvRl~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S~ 471 (606)
T PLN03144 399 VVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSA 471 (606)
T ss_pred EEEEEecccccccCCCCccEEEEEEeeeccCCccchhHHHHHHHHHHHHHHHhhcCCCceEEeccCCCCCCCh
Confidence 767653 2 25799999999642 456888898887642 368999999999999886
No 10
>PTZ00297 pantothenate kinase; Provisional
Probab=99.84 E-value=1.2e-19 Score=211.64 Aligned_cols=223 Identities=20% Similarity=0.195 Sum_probs=135.2
Q ss_pred HHHHHHHHHcc-CCcEEEEcCccCCccC-C--------cchHHHHHHHhCCcE-EEEecC---C-------CCeeEEEEE
Q 012520 191 SRSIAEVLREV-DADILSLQDVKAEEEN-D--------MKPLSDLAAALGMKY-VFAESW---A-------PEYGNAILS 249 (461)
Q Consensus 191 ~~~i~~~I~~~-~pDVV~LQEv~~~~~~-~--------~~~l~~L~~~~g~~~-~f~~~~---~-------~~~GvAIlS 249 (461)
.+++..+|++. +||||||||+...... + ...+.++.+..||.| .++... . ..+|+||+|
T Consensus 30 ~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~AILS 109 (1452)
T PTZ00297 30 HERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVDELKARGFHHYVISKQPSYLTMLRYNVCSDNGLIIAS 109 (1452)
T ss_pred HHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHHHHHhcCCceeEeecCccccccccCccccCCEEEEEE
Confidence 47788888884 7899999999865210 1 112222333457654 454332 1 578999999
Q ss_pred eccceeeEEEeccCC-----CCCceEEEEEEEcCC----CcEEEEEEecCCCC-CHHHHHHHHHHH---Hhc--------
Q 012520 250 KWPIKRWKVQKIADD-----KDFRNVLKATVDVPW----AGEVNVDSTQLDHL-NEKWRMKQICAI---IQS-------- 308 (461)
Q Consensus 250 R~Pi~~~~~~~l~~~-----~~~R~~i~a~i~l~g----g~~v~v~ntHL~~~-~~~~R~~Ql~~L---l~~-------- 308 (461)
||||...+...++.. ...|+++++++++++ ++.+.|+||||... ++..|..|+..+ ++.
T Consensus 110 R~PI~~~~~~~l~~~~~~~~~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~~~~R~~Q~~ql~~~i~~~i~~~~~~ 189 (1452)
T PTZ00297 110 RFPIWQRGSYTFRNHERGEQSVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDSLPSTSSQVQETRRFVESVIANVYEQ 189 (1452)
T ss_pred CCChhhceeeecCcccccccccccceEEEEEEccccCCCCceEEEEEeCCCCCCCcchHHHHHHHHHHHHHHhhhhhccc
Confidence 999999988888742 248999999999972 25899999999964 334566666554 332
Q ss_pred ----CCCCEEEEecCCCCC--CC--CChhhHHHHHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCCCceE------
Q 012520 309 ----NDSPHILAGGLNSLD--GS--DYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPVV------ 374 (461)
Q Consensus 309 ----~~~PvIL~GDFNs~~--~s--~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt------ 374 (461)
.+.|+||+||||... |. ......+..+...+... +.++.|++.......+.|
T Consensus 190 ~~~~~~~PvILaGDFN~~~~~~~~~~~~s~e~~~ml~~l~~~--------------~~~l~dv~~~~~~~~~~T~p~~~~ 255 (1452)
T PTZ00297 190 NNDGAEIPFVIAGDFNINGIDPHNGGHPTKRFQELLNELQDL--------------GSGVREVIYDETGQHPPTRPPILF 255 (1452)
T ss_pred ccCCCCCCEEEEeeCCCccccccccCCccHHHHHHHHHhhhc--------------cccHhHHhHhhcCCCCCCCCcccc
Confidence 345899999999761 11 00112232222222111 223444433222222222
Q ss_pred eecCCccccCCCCCCCceEEEEECCCCCCceeeeEEEEcCC--------CCCCCccceEEEEEecC
Q 012520 375 IIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYSVISS--------KGTSDHHIVKVDVTKVS 432 (461)
Q Consensus 375 ~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi~~--------~~~SDH~PV~ad~~l~~ 432 (461)
|+...+.. .+.....||||||+++. +.+.++.++.. .+.|||+||.++|.+..
T Consensus 256 fP~~~p~~-~~~~~~~riD~Ifv~~~----v~v~~~~v~~~~~~~~~~~~~~SDH~Pv~a~l~l~~ 316 (1452)
T PTZ00297 256 FPEQSKLE-RYSSTPQRQDYFFVTPC----VQVEKPRIEKFVVSSRRPYTYLSDHFGVSARLTLPL 316 (1452)
T ss_pred ccccCccc-cccCCCcceeEEEEeCC----ceEEEEEEecccccCCCCCCCcCcCccEEEEEEeCC
Confidence 22221110 11122369999999987 66777777321 25899999999999843
No 11
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.78 E-value=9.7e-19 Score=171.78 Aligned_cols=202 Identities=16% Similarity=0.127 Sum_probs=130.0
Q ss_pred hHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEE-EEecCCCCeeEEEEEecc-ceeeEEEeccCC
Q 012520 187 SAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYV-FAESWAPEYGNAILSKWP-IKRWKVQKIADD 264 (461)
Q Consensus 187 ~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~-f~~~~~~~~GvAIlSR~P-i~~~~~~~l~~~ 264 (461)
++....++...+...++|+|.+||+... +......+.. .|.|. +.....+.++++++|+.+ +...+. -+--
T Consensus 99 ~n~~~~k~Lsl~~~~~~D~v~~~E~~~~---~~~~~~~l~~--~yP~~~~~~~~~~~~~~a~~sr~~~~~~~~~--e~~~ 171 (309)
T COG3021 99 DNASVAKLLSLIQQLDADAVTTPEGVQL---WTAKVGALAA--QYPAFILCQHPTGVFTLAILSRRPCCPLTEA--EPWL 171 (309)
T ss_pred cCcCHHHHHHHHhhhCcchhhhHHHHHH---hHhHHHHHHH--hCCceeecCCCCCeeeeeecccccccccccc--Cccc
Confidence 3467888999999999999999999765 2222333443 34433 333334788999999976 321111 1112
Q ss_pred CCCceEEEEEEEcCCCcEEEEEEecCCC-C--CHHHHHHHHHHHHh---cCCCCEEEEecCCCCCCCCChhhHHHHHHHh
Q 012520 265 KDFRNVLKATVDVPWAGEVNVDSTQLDH-L--NEKWRMKQICAIIQ---SNDSPHILAGGLNSLDGSDYSAERWMDIVKY 338 (461)
Q Consensus 265 ~~~R~~i~a~i~l~gg~~v~v~ntHL~~-~--~~~~R~~Ql~~Ll~---~~~~PvIL~GDFNs~~~s~~~~~~~~~i~~~ 338 (461)
..++..+.......+|+++.|++.|... + .+..| +|+..|.+ ...+|+|++||||++||+.. .+.
T Consensus 172 ~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~~~~-~ql~~l~~~i~~~~gpvIlaGDfNa~pWS~~----~~R---- 242 (309)
T COG3021 172 RLPKSALATAYPLPDGTELTVVALHAVNFPVGTDPQR-AQLLELGDQIAGHSGPVILAGDFNAPPWSRT----AKR---- 242 (309)
T ss_pred cCCccceeEEEEcCCCCEEEEEeeccccccCCccHHH-HHHHHHHHHHHcCCCCeEEeecCCCcchhHH----HHH----
Confidence 4556677777777777999999999983 2 34444 67666644 45799999999999999851 111
Q ss_pred hhhcCCCChhHHHHHHHhcCCceeeecccCCCCceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEEEEcCCCCC
Q 012520 339 YEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYSVISSKGT 418 (461)
Q Consensus 339 ~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi~~~~~ 418 (461)
+...+-.+++..+|..++.+++.... ...+.+|||||+++ +.+.+.+++.. .+
T Consensus 243 ----------------~~~l~~~~~~~~aG~~~~~~~p~~~~-----r~~g~PIDhvf~rg-----l~~~ka~rl~~-~g 295 (309)
T COG3021 243 ----------------MAALGGLRAAPRAGLWEVRFTPDERR-----RAFGLPIDHVFYRG-----LTVMKARRLPD-RG 295 (309)
T ss_pred ----------------HHHhcccccchhccCCccccCHHHHh-----hccCCCcceeeecC-----cchhhhhhccc-cC
Confidence 11112223333334333333332211 13578999999998 35566677665 89
Q ss_pred CCccceEEEEEec
Q 012520 419 SDHHIVKVDVTKV 431 (461)
Q Consensus 419 SDH~PV~ad~~l~ 431 (461)
|||+||+++|.+-
T Consensus 296 SDH~PLLveF~~~ 308 (309)
T COG3021 296 SDHRPLLVEFSYG 308 (309)
T ss_pred CCCCceEEEEEec
Confidence 9999999999864
No 12
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.77 E-value=3.4e-18 Score=166.47 Aligned_cols=206 Identities=16% Similarity=0.106 Sum_probs=130.1
Q ss_pred CCccccccccchHhhHH-HHHHHHHcc-CCcEEEEcCccCCccC--------Ccc----hHHH----HH--HHhCCcEEE
Q 012520 176 LPTSMMTWMEESAKCSR-SIAEVLREV-DADILSLQDVKAEEEN--------DMK----PLSD----LA--AALGMKYVF 235 (461)
Q Consensus 176 ~~~~~~~~~~~~~~~~~-~i~~~I~~~-~pDVV~LQEv~~~~~~--------~~~----~l~~----L~--~~~g~~~~f 235 (461)
.+|||+|-......+.. .+.++|... ++|||++||+...... ... ...+ +. .+-++.|.|
T Consensus 28 ~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v~ey~w~l~~~srpgm~YiY 107 (271)
T PRK15251 28 ATWNLQGSSASTESKWNVNVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPIDEYTWNLGTRSRPNQVYIY 107 (271)
T ss_pred EEeecCCCCCCChhhhhhhHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCcccEEEEccCccCCCceEEE
Confidence 46777666544444555 577777775 5999999999865321 000 0000 11 122455666
Q ss_pred EecC---CCCeeEEEEEeccceeeEEEeccCCCCCceEEEEEEEcCCCcEEEEEEecCCCCCHHHHHHHHHHHHhcC---
Q 012520 236 AESW---APEYGNAILSKWPIKRWKVQKIADDKDFRNVLKATVDVPWAGEVNVDSTQLDHLNEKWRMKQICAIIQSN--- 309 (461)
Q Consensus 236 ~~~~---~~~~GvAIlSR~Pi~~~~~~~l~~~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~~~~R~~Ql~~Ll~~~--- 309 (461)
.... ++.+|+||+||+|..+.....++ ..+.|.++.++++ + +.|+++|+.+....++.++++.+.+..
T Consensus 108 ~~aiD~~ggr~glAIlSr~~a~~~~~l~~p-~~~~Rpilgi~i~--~---~~ffstH~~a~~~~da~aiV~~I~~~f~~~ 181 (271)
T PRK15251 108 YSRVDVGANRVNLAIVSRRRADEVIVLRPP-TVASRPIIGIRIG--N---DVFFSIHALANGGTDAGAIVRAVHNFFRPN 181 (271)
T ss_pred EecccCCCCceeEEEEecccccceEEecCC-CCcccceEEEEec--C---eEEEEeeecCCCCccHHHHHHHHHHHHhhc
Confidence 6543 47899999999998877776655 5678889988873 2 789999999864566888888876532
Q ss_pred --CCCEEEEecCCCCCCCCChhhHHHHHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCCCceEeecCCccccCCCC
Q 012520 310 --DSPHILAGGLNSLDGSDYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPVVIIAKGQNVQGTCK 387 (461)
Q Consensus 310 --~~PvIL~GDFNs~~~s~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt~~~~g~~~~~t~~ 387 (461)
..|++||||||..|++... . |....+.+..+...++. +|+.
T Consensus 182 ~~~~pw~I~GDFNr~P~sl~~------------------------~-l~~~~~~~~~~iv~p~~------------pT~~ 224 (271)
T PRK15251 182 MRHINWMIAGDFNRSPDRLES------------------------T-LDTEHLRNRVNIVAPTE------------PTQR 224 (271)
T ss_pred cCCCCEEEeccCCCCCcchhh------------------------h-hcchhcccccEEeCCCC------------CCCC
Confidence 3699999999999987510 0 00001221111112222 3344
Q ss_pred CCCceEEEEECCCCCCcee----eeEEEEc---CCCCCCCccceEE
Q 012520 388 YGTRVDYILASPDSPYKFV----PGSYSVI---SSKGTSDHHIVKV 426 (461)
Q Consensus 388 ~~~RIDyIf~S~~~~~~~~----v~s~~vi---~~~~~SDH~PV~a 426 (461)
++.+|||+++.+... +. +....++ .....|||+||..
T Consensus 225 s~~~IDYiv~~~s~~--~~~~~~i~a~l~~~~~~~~~aSDH~PV~f 268 (271)
T PRK15251 225 SGGTLDYAVTGNSNQ--TFGPPLLAASLMLASLRSQLASDHFPVNF 268 (271)
T ss_pred CCCeeEEEEecCccc--cccccchheeeeecccccccccCcccccc
Confidence 678999999976533 33 2333333 3557999999975
No 13
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.74 E-value=1.4e-17 Score=158.52 Aligned_cols=209 Identities=20% Similarity=0.197 Sum_probs=142.4
Q ss_pred hhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecCCCCeeEEE--EEeccceeeEEEeccCCCC
Q 012520 189 KCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESWAPEYGNAI--LSKWPIKRWKVQKIADDKD 266 (461)
Q Consensus 189 ~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~~~~~GvAI--lSR~Pi~~~~~~~l~~~~~ 266 (461)
.+..++..+|+-++|||||||||-.. .++.+.....++..+....+.++|.++ +|++.++..+...++...+
T Consensus 117 ~RMrAv~H~i~l~sPdiiflQEV~p~------~y~~~~K~~s~y~i~~~~~~~~~~~~~l~~s~~~Vks~~~i~F~NS~M 190 (349)
T KOG2756|consen 117 ERMRAVCHYLALYSPDVIFLQEVIPP------YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKVKSQEIIPFPNSKM 190 (349)
T ss_pred HHHHHHHHHHHhcCCCEEEEeecCch------hhHHHHHhhhheeEEEeccceeeeeeeeehhhcCccccceeccCcchh
Confidence 57889999999999999999999655 344454433333334444455666554 4778888888888888888
Q ss_pred CceEEEEEEEcCCCcEEEEEEecCCCC--CHHHHHHHHHHH-------Hhc-CCCCEEEEecCCCCCCCCChhhHHHHHH
Q 012520 267 FRNVLKATVDVPWAGEVNVDSTQLDHL--NEKWRMKQICAI-------IQS-NDSPHILAGGLNSLDGSDYSAERWMDIV 336 (461)
Q Consensus 267 ~R~~i~a~i~l~gg~~v~v~ntHL~~~--~~~~R~~Ql~~L-------l~~-~~~PvIL~GDFNs~~~s~~~~~~~~~i~ 336 (461)
.|....++++++| .++.+.++||.+. ...+|+.|+... ++. .+..||++||+|-..... .
T Consensus 191 ~R~L~I~Ev~v~G-~Kl~l~tsHLEStr~h~P~r~~qF~~~~~k~~EaIe~lPnA~ViFGGD~NlrD~ev---------~ 260 (349)
T KOG2756|consen 191 MRNLLIVEVNVSG-NKLCLMTSHLESTRGHAPERMNQFKMVLKKMQEAIESLPNATVIFGGDTNLRDREV---------T 260 (349)
T ss_pred hheeEEEEEeecC-ceEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEcCcccchhhhc---------c
Confidence 9999999999998 7799999999874 455666665544 333 356699999999764432 1
Q ss_pred HhhhhcCCCChhHHHHHHHhcCCceeeecccC-CCC-ceEee-cCCccccCCCCCCCceEEEEECC-----CC-CCceee
Q 012520 337 KYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAG-ECE-PVVII-AKGQNVQGTCKYGTRVDYILASP-----DS-PYKFVP 407 (461)
Q Consensus 337 ~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~-~~~-~tt~~-~~g~~~~~t~~~~~RIDyIf~S~-----~~-~~~~~v 407 (461)
+ .+- -.+++|+|.+.| ++. .+||. ..|++.++++....|+|.||++- .. ..++..
T Consensus 261 r----~~l------------PD~~vDvWE~lg~p~~~~FTwDT~~N~nl~G~~a~k~RfDRi~~r~~~~~G~~~~~~l~l 324 (349)
T KOG2756|consen 261 R----CGL------------PDNIVDVWEFLGKPKHCQFTWDTQMNSNLGGTAACKLRFDRIFFRAAAEEGHIIPRSLDL 324 (349)
T ss_pred c----CCC------------CchHHHHHHHhCCCCcCceeeecccCcccchhHHHHHHHHHHhhhhhhhcCCcCccccch
Confidence 1 111 237889998887 333 35555 45566666666679999999943 31 112222
Q ss_pred eEEEEcCC--CCCCCccceEEEEE
Q 012520 408 GSYSVISS--KGTSDHHIVKVDVT 429 (461)
Q Consensus 408 ~s~~vi~~--~~~SDH~PV~ad~~ 429 (461)
..-+.+.. ..+|||+++.++|.
T Consensus 325 ~g~~kiRgc~~fPSDHwgll~Tl~ 348 (349)
T KOG2756|consen 325 LGLEKLRGCGRFPSDHWGLLCTLD 348 (349)
T ss_pred hhhhhhccCCCCCcccceeeeecc
Confidence 22222221 26899999999985
No 14
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.73 E-value=7.4e-18 Score=166.20 Aligned_cols=232 Identities=21% Similarity=0.145 Sum_probs=145.8
Q ss_pred cccccCCccCCccccccccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhC----CcEEEEecCCCC
Q 012520 167 NVLMRSPVCLPTSMMTWMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALG----MKYVFAESWAPE 242 (461)
Q Consensus 167 ~~~~~n~~c~~~~~~~~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g----~~~~f~~~~~~~ 242 (461)
++...|..|+|+. ......++..+-+.+.....||+.|||++... ..+.|.+... |...|.... -+
T Consensus 10 riltlN~Wgip~~----Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~e-----D~~~L~~~~ss~yPysh~FHSGi-mG 79 (422)
T KOG3873|consen 10 RILTLNIWGIPYV----SKDRRHRMDAIGDELASEKYDIVSLQEVWSQE-----DFEYLQSGCSSVYPYSHYFHSGI-MG 79 (422)
T ss_pred eeeEeeccccccc----cchhHHHHHHHhHHHhhcccchhhHHHHHHHH-----HHHHHHHhccccCchHHhhhccc-cc
Confidence 3445565666533 23334678899999999999999999997652 2345554333 222343222 36
Q ss_pred eeEEEEEeccceeeEEEeccC-----------CCCCceEEEEEEEcCCCcEEEEEEecCCCCC-------HHHHHHHHHH
Q 012520 243 YGNAILSKWPIKRWKVQKIAD-----------DKDFRNVLKATVDVPWAGEVNVDSTQLDHLN-------EKWRMKQICA 304 (461)
Q Consensus 243 ~GvAIlSR~Pi~~~~~~~l~~-----------~~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~-------~~~R~~Ql~~ 304 (461)
.|++++||+||.+......+- -..++++..+.+.++| ..|.++|+||...- -..|..|+-.
T Consensus 80 aGL~vfSK~PI~~t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~~l~~~g-~~v~~yntHLHAeY~rq~D~YL~HR~~QAwd 158 (422)
T KOG3873|consen 80 AGLCVFSKHPILETLFHRYSLNGYPHAIHRGDWFGGKGVGLTVLLVGG-RMVNLYNTHLHAEYDRQNDEYLCHRVAQAWD 158 (422)
T ss_pred CceEEeecCchhhhhhhccccCCccceeeeccccccceeEEEEEeeCC-EEeeeeehhccccccccCchhhhHHHHHHHH
Confidence 799999999999775544432 1235667788888888 99999999997631 2467788766
Q ss_pred HHh------cCCCCEEEEecCCCCCCCCChhhHHHHHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCCC--c----
Q 012520 305 IIQ------SNDSPHILAGGLNSLDGSDYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECE--P---- 372 (461)
Q Consensus 305 Ll~------~~~~PvIL~GDFNs~~~s~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~--~---- 372 (461)
+.+ ..+.-||++||||+.|.+-. .+.|...|++|+|...++.+ .
T Consensus 159 laqfi~~t~q~~~vVI~~GDLN~~P~dl~------------------------~~ll~~a~l~daw~~~h~~q~e~~~~r 214 (422)
T KOG3873|consen 159 LAQFIRATRQNADVVILAGDLNMQPQDLG------------------------HKLLLSAGLVDAWTSLHLDQCESDSFR 214 (422)
T ss_pred HHHHHHHHhcCCcEEEEecCCCCCccccc------------------------eeeeeccchhhhHhhhchhhhcCcccc
Confidence 654 23567899999999998751 12233556677766443211 0
Q ss_pred -----------eEeecCCcc--c--cCCCCCCCceEEEEECCCCCCceeeeEEEEcC------CCCCCCccceEEEEEec
Q 012520 373 -----------VVIIAKGQN--V--QGTCKYGTRVDYILASPDSPYKFVPGSYSVIS------SKGTSDHHIVKVDVTKV 431 (461)
Q Consensus 373 -----------tt~~~~g~~--~--~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi~------~~~~SDH~PV~ad~~l~ 431 (461)
|+-+..|-. . ......+.||||||++++. ......+++... .-..|||+++.++|.+.
T Consensus 215 ~s~~~~l~~g~tcd~~~N~y~~aqk~~ddp~~~RiDYvl~k~~~-~~~~~a~~~~t~~rvP~~d~s~SDH~Al~a~L~I~ 293 (422)
T KOG3873|consen 215 LSEDKELVEGNTCDSPLNCYTSAQKREDDPLGKRIDYVLVKPGD-CNAKIAEVEFTEPRVPGEDCSYSDHEALMATLKIF 293 (422)
T ss_pred cchhhhhhcCCcccCcchhhhHHHhCCCCccceeeeEEEEcCcc-eEEEeeeEEecCCCCCCCCCCccchhhheeEEEee
Confidence 000000000 0 0112347999999999985 223333444332 12579999999999987
Q ss_pred Ccc
Q 012520 432 SEN 434 (461)
Q Consensus 432 ~e~ 434 (461)
+.+
T Consensus 294 ~~~ 296 (422)
T KOG3873|consen 294 KQP 296 (422)
T ss_pred cCC
Confidence 754
No 15
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.63 E-value=5.3e-16 Score=146.60 Aligned_cols=135 Identities=26% Similarity=0.287 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEEEecCC-----CCeeEEEEEeccceeeEEEeccC
Q 012520 189 KCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVFAESWA-----PEYGNAILSKWPIKRWKVQKIAD 263 (461)
Q Consensus 189 ~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f~~~~~-----~~~GvAIlSR~Pi~~~~~~~l~~ 263 (461)
.+...|+++|.+.+||||||||+...... ......+....++.+.+..... +.+|++|++|.|+.......+..
T Consensus 16 ~~~~~i~~~i~~~~~Dii~LQEv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~ 94 (249)
T PF03372_consen 16 RKRREIAQWIAELDPDIIALQEVRNDDLS-ELLEEQLRGYLGYYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSL 94 (249)
T ss_dssp HHHHHHHHHHHHHT-SEEEEEEEESHHHH-HHHHHHHHTCTTHEEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCEEEEecchhhhhh-hhhhhhcccccccccceeccccccccccCceEEEEEcccccccccccccc
Confidence 45566999999999999999999753100 0011233322222233332222 35899999999987655544321
Q ss_pred --CCCCce-------EEEEEEEcCCCcEEEEEEecCCCCCHHHHHHHHHHHH---hc-----CCCCEEEEecCCCCCCCC
Q 012520 264 --DKDFRN-------VLKATVDVPWAGEVNVDSTQLDHLNEKWRMKQICAII---QS-----NDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 264 --~~~~R~-------~i~a~i~l~gg~~v~v~ntHL~~~~~~~R~~Ql~~Ll---~~-----~~~PvIL~GDFNs~~~s~ 326 (461)
...... ...+.+.+. +.+|.|+++|+.+ ....|..+...++ .. ...|+|||||||+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~ 172 (249)
T PF03372_consen 95 FSKPGIRIFRRSSKSKGIVPVSIN-GKPITVVNVHLPS-SNDERQEQWRELLARIQKIYADNPNEPVIVMGDFNSRPDSR 172 (249)
T ss_dssp ESSSTTCEEEEEEEEEEEEEEEEE-TEEEEEEEEETTS-HHHHHHHHHHHHHHHHHHHHHTSSCCEEEEEEE-SS-BSSG
T ss_pred cccccccccccccccccccccccc-ceEEEeeeccccc-cchhhhhhhhhhhhhhhhcccccccceEEEEeecccCCccc
Confidence 111110 111111122 3799999999986 3333333333332 21 123799999999998764
No 16
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.61 E-value=1.3e-14 Score=149.35 Aligned_cols=168 Identities=20% Similarity=0.186 Sum_probs=108.5
Q ss_pred ccE-EeeecCCCceeeeeccccccCCccCCccccccccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHH
Q 012520 149 KLK-VSINLPDNEISLANSNVLMRSPVCLPTSMMTWMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAA 227 (461)
Q Consensus 149 ~~~-vs~n~~~~~isl~~~~~~~~n~~c~~~~~~~~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~ 227 (461)
++. +|||+++...... -...+. + | .+....|..|...|+.+|..++|||+|||||+.... ......+..
T Consensus 116 ~ftvmSYNILAQ~l~~~-~~r~~~-~-~-----s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~--~~~~~~~~~ 185 (495)
T KOG2338|consen 116 DFTVMSYNILAQDLLRD-IRRLYF-P-E-----SGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHY--PEFWQPLLG 185 (495)
T ss_pred ceEEEEehHhHHHHHHH-hHHhhc-c-C-----ChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhh--HHHHHHHHh
Confidence 565 8999987763211 111111 1 2 233445668899999999999999999999987632 223455666
Q ss_pred HhCCcEEEEecC-CCCeeEEEEEe---ccceeeEEEeccCC---CC--CceEEEEEEEc--CC--CcEEEEEEecCCCC-
Q 012520 228 ALGMKYVFAESW-APEYGNAILSK---WPIKRWKVQKIADD---KD--FRNVLKATVDV--PW--AGEVNVDSTQLDHL- 293 (461)
Q Consensus 228 ~~g~~~~f~~~~-~~~~GvAIlSR---~Pi~~~~~~~l~~~---~~--~R~~i~a~i~l--~g--g~~v~v~ntHL~~~- 293 (461)
.+||...|.... ....|+||+++ |.+.......+.+. .. ....+.+.+++ .. ++.+.|+||||-+.
T Consensus 186 ~lGy~~~~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np 265 (495)
T KOG2338|consen 186 KLGYTGFFKRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNP 265 (495)
T ss_pred hcCceEEEEeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecC
Confidence 789887665444 57889999976 44443322222111 11 11233333333 21 46899999999763
Q ss_pred -CHHHHHHHHHHHHhc---------CCCCEEEEecCCCCCCCC
Q 012520 294 -NEKWRMKQICAIIQS---------NDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 294 -~~~~R~~Ql~~Ll~~---------~~~PvIL~GDFNs~~~s~ 326 (461)
...+|.+|...|++. ...|+|+|||||+.|.+.
T Consensus 266 ~~~~vrL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~~ 308 (495)
T KOG2338|consen 266 SRSDVRLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDSP 308 (495)
T ss_pred cccchhhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCCC
Confidence 567899999988752 145999999999999876
No 17
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.41 E-value=9.8e-12 Score=122.89 Aligned_cols=130 Identities=16% Similarity=0.113 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHccCCcEEEEcCccCCccCC-cchHHHHHHHhCCcEEEE--ecCC---CCeeEEEEEe---ccceeeEEE
Q 012520 189 KCSRSIAEVLREVDADILSLQDVKAEEEND-MKPLSDLAAALGMKYVFA--ESWA---PEYGNAILSK---WPIKRWKVQ 259 (461)
Q Consensus 189 ~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~-~~~l~~L~~~~g~~~~f~--~~~~---~~~GvAIlSR---~Pi~~~~~~ 259 (461)
.+.+.|++.|+ ++|||++||+....... ...+..|.+..+..|.|. ...+ ...-.+++.| +.+....
T Consensus 37 ~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~-- 112 (276)
T smart00476 37 TLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPLGRNSYKEQYLFLYRSDLVSVLDSY-- 112 (276)
T ss_pred HHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCCCCCCCCCEEEEEEEecceEEEcccc--
Confidence 46777888888 78999999997642111 111223332222234432 2222 2234567766 3333322
Q ss_pred eccC------CCCCceEEEEEEEcCC--CcEEEEEEecCCCCCHHHHHHHHHHHH--------hcCCCCEEEEecCCCCC
Q 012520 260 KIAD------DKDFRNVLKATVDVPW--AGEVNVDSTQLDHLNEKWRMKQICAII--------QSNDSPHILAGGLNSLD 323 (461)
Q Consensus 260 ~l~~------~~~~R~~i~a~i~l~g--g~~v~v~ntHL~~~~~~~R~~Ql~~Ll--------~~~~~PvIL~GDFNs~~ 323 (461)
.+++ ....|...++.|+.+. +..|.++++|+++. .+.++++.|. ++...|+||+||||+..
T Consensus 113 ~f~d~~~~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H~~p~---~~~~e~~aL~~v~~~~~~~~~~~~villGDFNa~~ 189 (276)
T smart00476 113 LYDDGCECGNDVFSREPFVVKFSSPSTAVKEFVIVPLHTTPE---AAVAEIDALYDVYLDVRQKWGTEDVIFMGDFNAGC 189 (276)
T ss_pred eecCCCCCccccccccceEEEEEeCCCCCccEEEEEecCChH---HHHHHHHHHHHHHHHHHHhhccCCEEEEccCCCCC
Confidence 2232 2347888999998765 35899999999963 3344444432 23578999999999976
Q ss_pred CC
Q 012520 324 GS 325 (461)
Q Consensus 324 ~s 325 (461)
..
T Consensus 190 ~y 191 (276)
T smart00476 190 SY 191 (276)
T ss_pred Cc
Confidence 54
No 18
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=99.32 E-value=1.6e-11 Score=122.02 Aligned_cols=259 Identities=20% Similarity=0.175 Sum_probs=140.4
Q ss_pred ccE-EeeecCCCceeeeeccccccCCccCCccccccccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHH
Q 012520 149 KLK-VSINLPDNEISLANSNVLMRSPVCLPTSMMTWMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAA 227 (461)
Q Consensus 149 ~~~-vs~n~~~~~isl~~~~~~~~n~~c~~~~~~~~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~ 227 (461)
++. ++||.+++. ++...+.- + +++...|..|.+.|+++|..++|||+|||||+... ..+...+...
T Consensus 30 ~ftimTYN~Laq~--y~~r~~y~---~------s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~--~~~fw~~~l~ 96 (378)
T COG5239 30 DFTIMTYNVLAQT--YATRKMYP---Y------SGWALKWSYRSRLLLQELLYYNADILCLQEVDAED--FEDFWKDQLG 96 (378)
T ss_pred eeEEEehhhhhhh--hccccccC---C------chhhhhhHHHHHHHHHHHhccCCceeeeehhhhhH--HHHHHHHHhc
Confidence 465 788876554 33222211 1 24445566888999999999999999999998763 2223444445
Q ss_pred HhCCcEEEEecCC-----------CCeeEEEEEeccceeeE-------EE--eccCC-----------------CCCce-
Q 012520 228 ALGMKYVFAESWA-----------PEYGNAILSKWPIKRWK-------VQ--KIADD-----------------KDFRN- 269 (461)
Q Consensus 228 ~~g~~~~f~~~~~-----------~~~GvAIlSR~Pi~~~~-------~~--~l~~~-----------------~~~R~- 269 (461)
.+||...|.+... .-.|++|+.++-+.... ++ +.+.+ .....
T Consensus 97 ~~gY~~if~~k~~k~~~m~~~d~t~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~w 176 (378)
T COG5239 97 KLGYDGIFIPKERKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIAW 176 (378)
T ss_pred ccccceEEecCCCcccccccccccccceEEEEEEeccccchhhhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcch
Confidence 7788877754322 35789998776211111 00 00100 11111
Q ss_pred --EEEEEEEcCCCcEEEEEEecCCCC--CHHHHHHHHHHH-------HhcC--------------CCCEEEEecCCCCCC
Q 012520 270 --VLKATVDVPWAGEVNVDSTQLDHL--NEKWRMKQICAI-------IQSN--------------DSPHILAGGLNSLDG 324 (461)
Q Consensus 270 --~i~a~i~l~gg~~v~v~ntHL~~~--~~~~R~~Ql~~L-------l~~~--------------~~PvIL~GDFNs~~~ 324 (461)
.+...+..+.|..+.+++||+.+. .++...-|...+ +... ..++.++||||+...
T Consensus 177 ~~l~~~l~n~e~gd~~~va~Th~~w~~~~~dvk~iq~s~l~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~~ 256 (378)
T COG5239 177 VCLFVGLFNKEPGDTPYVANTHLPWDPKYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRA 256 (378)
T ss_pred hheeeeeccCCCCCceeEEeccccccCCCCchheehhhHHHHHHHHHhhhcCCcchhccccccCcccccccCCCccceec
Confidence 345555666678999999999862 233333333332 2110 126799999999988
Q ss_pred CCChhhHHHHHHHhhhhcCCCChhHHHHHHHh-cCCceeeecc--cCC-CCc--eEeecCCccccCCCCCCCceEEEEEC
Q 012520 325 SDYSAERWMDIVKYYEDIGKPTPRVEVMKLLK-GIEYVDSKEF--AGE-CEP--VVIIAKGQNVQGTCKYGTRVDYILAS 398 (461)
Q Consensus 325 s~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~-~~gl~Da~~~--~~~-~~~--tt~~~~g~~~~~t~~~~~RIDyIf~S 398 (461)
+.........+..+.+.... ..+..+. +.++.+.... .+. +++ |.| +.....-|||||+.
T Consensus 257 s~vy~~l~~~~~q~H~~~~~-----~~~~lysvg~~~~h~~n~~~~~~~~~~~fTN~---------t~~~kG~iDYIfy~ 322 (378)
T COG5239 257 SLVYKFLVTSQIQLHESLNG-----RDFSLYSVGYKFVHPENLKSDNSKGELGFTNW---------TPGFKGVIDYIFYH 322 (378)
T ss_pred ceehhhhhhHHHHhhhcccc-----cchhhhcccccccChhhcccCCCcCCcccccc---------cccccceeEEEEEe
Confidence 76322222212222221110 0122221 3455554432 111 111 222 23456789999999
Q ss_pred CCCCCceeeeEEEEcC------------CCCCCCccceEEEEEecCccc
Q 012520 399 PDSPYKFVPGSYSVIS------------SKGTSDHHIVKVDVTKVSENA 435 (461)
Q Consensus 399 ~~~~~~~~v~s~~vi~------------~~~~SDH~PV~ad~~l~~e~~ 435 (461)
+++..+. ....++++ .+.+|||-|+.++|.+.....
T Consensus 323 ~~~~~~~-~~~l~~ve~e~~~k~~G~pn~~~pSdhipl~~ef~~~~~~~ 370 (378)
T COG5239 323 GGLLTRQ-TGLLGVVEGEYASKVIGLPNMPFPSDHIPLLAEFASDHKNL 370 (378)
T ss_pred cCcceee-eccccccccchhhhhcccCCCCCccccccchhccccccccc
Confidence 9832111 11111221 236899999999998776553
No 19
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=99.30 E-value=1.1e-10 Score=117.88 Aligned_cols=229 Identities=15% Similarity=0.052 Sum_probs=117.5
Q ss_pred cCCcE--EEEcCccCCcc------CC---cchHHHHHHHhC--CcEEEEec-CCCCeeEEEEEeccc----eeeEEEecc
Q 012520 201 VDADI--LSLQDVKAEEE------ND---MKPLSDLAAALG--MKYVFAES-WAPEYGNAILSKWPI----KRWKVQKIA 262 (461)
Q Consensus 201 ~~pDV--V~LQEv~~~~~------~~---~~~l~~L~~~~g--~~~~f~~~-~~~~~GvAIlSR~Pi----~~~~~~~l~ 262 (461)
.+||| |+|||+..... .. ..-...+...++ ..|..... .-++.++.|+.+..+ .........
T Consensus 37 ~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~~l~~~~~Y~~v~~~~l~gi~l~vf~~~~~~~~i~~v~~~~v~ 116 (310)
T smart00128 37 EKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIESSLNGDGQYNVLAKVRLVGILVLVFVKANHLVYIKDVETFTVK 116 (310)
T ss_pred CCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHHhcCCCCceEEEeeeeecceEEEEEEehhhcCccceeEeeeee
Confidence 67999 77999932100 00 001223334444 44554322 235566778887443 222222222
Q ss_pred CC----CCCceEEEEEEEcCCCcEEEEEEecCCCCC--HHHHHHHHHHHHhcC------------CCCEEEEecCCCCCC
Q 012520 263 DD----KDFRNVLKATVDVPWAGEVNVDSTQLDHLN--EKWRMKQICAIIQSN------------DSPHILAGGLNSLDG 324 (461)
Q Consensus 263 ~~----~~~R~~i~a~i~l~gg~~v~v~ntHL~~~~--~~~R~~Ql~~Ll~~~------------~~PvIL~GDFNs~~~ 324 (461)
.+ ...++++.+.+++.+ ..+.++++||.+.. -..|..+...+++.. ...+|++||||...+
T Consensus 117 ~G~~~~~~nKG~v~i~~~~~~-~~~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~ 195 (310)
T smart00128 117 TGMGGLWGNKGAVAVRFKLSD-TSFCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD 195 (310)
T ss_pred ccccceeecCceEEEEEEEcC-cEEEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence 11 235778889999877 89999999999743 357888888886421 467999999998887
Q ss_pred CCChhhHHHHHHH-hhhhcCCCChhHHHHHHHhcCCceeeecccCCCCceEeecC--CccccCCC-CCCCc--eEEEEEC
Q 012520 325 SDYSAERWMDIVK-YYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEPVVIIAK--GQNVQGTC-KYGTR--VDYILAS 398 (461)
Q Consensus 325 s~~~~~~~~~i~~-~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~tt~~~~--g~~~~~t~-~~~~R--IDyIf~S 398 (461)
..........+.. .+..+. ..+++.........+.-|....-.-+-||.+. |.....+. +.+.+ -|.||++
T Consensus 196 ~~~~~~v~~~i~~~~~~~Ll---~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~~t~~Yd~~~k~R~PsWcDRIL~~ 272 (310)
T smart00128 196 SPSYEEVRRKISKKEFDDLL---EKDQLNRQKEAGKVFKGFQEGPITFPPTYKYDSVGTETYDTSEKKRVPAWCDRILYR 272 (310)
T ss_pred CCCHHHHHHHHhhCcHHHHh---hhhhHHHHhhcccccCcCccCCcCCCCCeeecCCCCccccCcccccCcchhheehhh
Confidence 6532222121111 111111 11222222221111111211111112233332 22111111 11111 5999998
Q ss_pred CCCCCceeee-EEEEcCCCCCCCccceEEEEEecCcc
Q 012520 399 PDSPYKFVPG-SYSVISSKGTSDHHIVKVDVTKVSEN 434 (461)
Q Consensus 399 ~~~~~~~~v~-s~~vi~~~~~SDH~PV~ad~~l~~e~ 434 (461)
.... .+... .|........|||.||.+.|.+....
T Consensus 273 ~~~~-~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~~~ 308 (310)
T smart00128 273 SNGP-NLIQLSEYHSGMELTTSDHKPVFATFRLKVTA 308 (310)
T ss_pred ccCC-CceecccccCCCccCCcCcccccEEEEEEEEe
Confidence 6322 12222 25555556789999999999886543
No 20
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=99.07 E-value=3.8e-10 Score=115.41 Aligned_cols=159 Identities=22% Similarity=0.238 Sum_probs=88.3
Q ss_pred EeeecCCCceeeeeccccccCCccCCccccccccchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCC
Q 012520 152 VSINLPDNEISLANSNVLMRSPVCLPTSMMTWMEESAKCSRSIAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGM 231 (461)
Q Consensus 152 vs~n~~~~~isl~~~~~~~~n~~c~~~~~~~~~~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~ 231 (461)
.+||+.... ++.+...+ +|..|.. .+..+...+.+.|..++||++|||||+... +.........||
T Consensus 23 ~s~n~l~~~--~~~~~~~~---~~~~~~~-----~w~~r~~~~~~ei~~~~ad~icLqev~~~~----~~~~p~l~~~gY 88 (361)
T KOG0620|consen 23 LSYNILSQL--YATSKLYM---YCPSWAL-----SWEYRRQLLLEEILNYNADILCLQEVDRYH----DFFSPELEASGY 88 (361)
T ss_pred echhhhhhh--hcccCCCc---ccchhhc-----cHHHHHHHHHHHHhCCCcceeecchhhHHH----HHccchhhhcCC
Confidence 466654333 33333333 5655554 346788899999999999999999993321 222222234488
Q ss_pred cEEEEec-------CCCCeeEEEEEe---ccceeeEEEeccC-------------------CCCCceEEEEEEEcCCCcE
Q 012520 232 KYVFAES-------WAPEYGNAILSK---WPIKRWKVQKIAD-------------------DKDFRNVLKATVDVPWAGE 282 (461)
Q Consensus 232 ~~~f~~~-------~~~~~GvAIlSR---~Pi~~~~~~~l~~-------------------~~~~R~~i~a~i~l~gg~~ 282 (461)
...|.+. .....|.||+.| +.+.......+.. +..... ...++-..+..
T Consensus 89 ~g~~~~k~~~~~~~~~~~dGcaiffk~s~f~li~~~~i~~n~~~~~~~~~~~~~~~~~~~~d~~~~~--l~~L~~~~~~~ 166 (361)
T KOG0620|consen 89 SGIFIEKTRMGEVELEKIDGCAIFFKPSLFQLIHSSAIELNQLALSRLPPNIAQLNRLTTLDNSGNK--LVSLKAELGNM 166 (361)
T ss_pred cceeecccccchhhcccCceeeeeecchHHhhhhhhhhhhHHHHHhhcchhHHHHHhhhccccccch--hhhhhhhcCCc
Confidence 8777763 335789999855 4443222211110 111111 11111111223
Q ss_pred EE----EEEec--CCCCCHHHHHHHHHHHHhc---------------------CCCCEEEEecCCCCCCCC
Q 012520 283 VN----VDSTQ--LDHLNEKWRMKQICAIIQS---------------------NDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 283 v~----v~ntH--L~~~~~~~R~~Ql~~Ll~~---------------------~~~PvIL~GDFNs~~~s~ 326 (461)
+. ++|+| +++..+..+.-|+..++.. ...|+++|||||+.+.++
T Consensus 167 ~~~~~~~~n~h~~~~~~~~~vkl~qv~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~gdfNs~p~~~ 237 (361)
T KOG0620|consen 167 VSLPHLLLNTHILWDLPYEDVKLFQVLTLLLELAPLSPEILKIYREGNLATRIASFPLLLCGDFNSTPLSP 237 (361)
T ss_pred eeeccccccceeccCCCccchHHHHHHHHhhcccccchhhhhhhccccccccccccceeeeccccCCCCcc
Confidence 33 24555 4444566677676665432 147999999999998876
No 21
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=98.85 E-value=7.8e-08 Score=103.77 Aligned_cols=214 Identities=20% Similarity=0.233 Sum_probs=126.6
Q ss_pred cchHhhHHHHHHHHHccCCcEEEEcCccCCccCCcc--hH----HHHHHHhCC--cEEEEecC------CCCeeEEEEEe
Q 012520 185 EESAKCSRSIAEVLREVDADILSLQDVKAEEENDMK--PL----SDLAAALGM--KYVFAESW------APEYGNAILSK 250 (461)
Q Consensus 185 ~~~~~~~~~i~~~I~~~~pDVV~LQEv~~~~~~~~~--~l----~~L~~~~g~--~~~f~~~~------~~~~GvAIlSR 250 (461)
.+..+...++...|...++||++|.|+........+ ++ ..|.+..|- .|.|.... ....+++++.|
T Consensus 498 ~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~ 577 (798)
T COG2374 498 EEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAIAQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYK 577 (798)
T ss_pred hHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHHHHHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEec
Confidence 444566778999999999999999999876332222 33 344444443 35554322 13456666655
Q ss_pred ccce-eeEEEeccC-----------CCCCceEEEEEEEc-CCCcEEEEEEecCCCCC----------------HHHHHHH
Q 012520 251 WPIK-RWKVQKIAD-----------DKDFRNVLKATVDV-PWAGEVNVDSTQLDHLN----------------EKWRMKQ 301 (461)
Q Consensus 251 ~Pi~-~~~~~~l~~-----------~~~~R~~i~a~i~l-~gg~~v~v~ntHL~~~~----------------~~~R~~Q 301 (461)
-.-. ......+.. ....|..+..+|.. .++.+|.++.-|+.++. ...|.+|
T Consensus 578 ~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF~~~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~ 657 (798)
T COG2374 578 PSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTFQDLSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRA 657 (798)
T ss_pred cceEEecccccccccccccccccccccccCcchhhhhhhccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHH
Confidence 2111 001111110 11235556666653 33578999999997631 3467788
Q ss_pred HHHHHhc--------CCCCEEEEecCCCCCCCCChhhHHHHHHHhhhhcCCCChhHHHHHHHhcCCceeeec-ccCCCCc
Q 012520 302 ICAIIQS--------NDSPHILAGGLNSLDGSDYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKE-FAGECEP 372 (461)
Q Consensus 302 l~~Ll~~--------~~~PvIL~GDFNs~~~s~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~-~~~~~~~ 372 (461)
+.+|+.+ .+.+++|+||||+...++ .++.|.+.||.+... +....+.
T Consensus 658 AqaL~~~la~~~~~~~d~~~viLGD~N~y~~ed------------------------pI~~l~~aGy~~l~~~~~~~~~~ 713 (798)
T COG2374 658 AQALAAFLATNPTGKADADIVILGDFNDYAFED------------------------PIQALEGAGYMNLAARFHDAGDR 713 (798)
T ss_pred HHHHHHHHhhCcccccCCCEEEEeccchhhhcc------------------------HHHHHhhcCchhhhhhccCCCCc
Confidence 8888653 367999999999976654 455666767655432 2223344
Q ss_pred eEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEEEEc---------------------------CCCCCCCccceE
Q 012520 373 VVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYSVI---------------------------SSKGTSDHHIVK 425 (461)
Q Consensus 373 tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi---------------------------~~~~~SDH~PV~ 425 (461)
++|-..|. ..-|||+|+|..+..+ +..+..+ .....|||-||+
T Consensus 714 YSY~f~G~--------~gtLDhaLas~sl~~~--v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvv 783 (798)
T COG2374 714 YSYVFNGQ--------SGTLDHALASASLAAQ--VSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVV 783 (798)
T ss_pred eEEEECCc--------cchHhhhhhhhhhhhh--ccCceeeeecccccchhhhhhhhccccccccccCCccccCCCCCeE
Confidence 44544543 3679999998765311 1111110 011479999999
Q ss_pred EEEEecC
Q 012520 426 VDVTKVS 432 (461)
Q Consensus 426 ad~~l~~ 432 (461)
+.|.|..
T Consensus 784 vglnL~~ 790 (798)
T COG2374 784 VGLNLLG 790 (798)
T ss_pred EEEEecc
Confidence 9998865
No 22
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=98.70 E-value=8.4e-08 Score=81.97 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=55.8
Q ss_pred EEEEEecCCCCC-HHHHHHHHHHHHhcCCC-CEEEEecCCCCCCCCChhhHHHHHHHhhhhcCCCChhHHHHHHHhcCCc
Q 012520 283 VNVDSTQLDHLN-EKWRMKQICAIIQSNDS-PHILAGGLNSLDGSDYSAERWMDIVKYYEDIGKPTPRVEVMKLLKGIEY 360 (461)
Q Consensus 283 v~v~ntHL~~~~-~~~R~~Ql~~Ll~~~~~-PvIL~GDFNs~~~s~~~~~~~~~i~~~~~~~~~~~p~~~v~~~L~~~gl 360 (461)
|.|++++..+.. ...-..++..++..... ++||+||||.... .|...... . ....++.+.+...++
T Consensus 1 i~i~~vY~pp~~~~~~~~~~l~~~~~~~~~~~~Ii~GDFN~~~~------~w~~~~~~--~----~~~~~l~~~~~~~~l 68 (119)
T PF14529_consen 1 ITIISVYAPPSSEREEFFDQLRQLLKNLPPAPIIIGGDFNAHHP------NWDSSNTN--S----RRGEQLLDWLDSHNL 68 (119)
T ss_dssp EEEEEEE--TTS-CHHHHHHHHHHHHCCTTSSEEEEEE-----G------GGT-SCHH--H----HHHHHHHHHHHHCTE
T ss_pred CEEEEEECCCCccHHHHHHHHHHHHHhCCCCCEEEEeECCCCch------hhhhcccc--c----hhHHHHHHHhhhcee
Confidence 467888877544 13334566666665443 9999999998422 12110000 0 112345667777888
Q ss_pred eeeecccCCCCceEeecCCccccCCCCCCCceEEEEECCCCCCceeeeEEEEcCCCCCCCccceE
Q 012520 361 VDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPDSPYKFVPGSYSVISSKGTSDHHIVK 425 (461)
Q Consensus 361 ~Da~~~~~~~~~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~~~~~~v~s~~vi~~~~~SDH~PV~ 425 (461)
.++.. ....+|++...+ ..+||+||++...... ...........|||+||+
T Consensus 69 ~~~~~--~~~~~T~~~~~~---------~s~iD~~~~s~~~~~~---~~~~~~~~~~~SDH~~I~ 119 (119)
T PF14529_consen 69 VDLNP--PGRPPTFISNSH---------GSRIDLILTSDNLLSW---CVWVISSDDSGSDHCPIT 119 (119)
T ss_dssp EE-----TT---SEEECCC---------EE--EEEEEECCGCCC---EEEEEETTSSSSSB--EE
T ss_pred eeeec--CCCCCcccCCCC---------CceEEEEEECChHHhc---CcEEEeCCCCCCCccCCC
Confidence 87632 112334332211 5799999999986422 223333445799999985
No 23
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=5.9e-06 Score=91.07 Aligned_cols=161 Identities=14% Similarity=-0.047 Sum_probs=88.4
Q ss_pred CCceEEEEEEEcCCCcEEEEEEecCCCC--CHHHHHHHHHHHHhc----------CCCCEEEEecCCCCCCCCChhhHHH
Q 012520 266 DFRNVLKATVDVPWAGEVNVDSTQLDHL--NEKWRMKQICAIIQS----------NDSPHILAGGLNSLDGSDYSAERWM 333 (461)
Q Consensus 266 ~~R~~i~a~i~l~gg~~v~v~ntHL~~~--~~~~R~~Ql~~Ll~~----------~~~PvIL~GDFNs~~~s~~~~~~~~ 333 (461)
..++++..++.+.+ ..+.|+|.||.+. .-.+|......+.+. ...-+++|||||...+..+ .+...
T Consensus 659 gNKGAVAIrf~~~~-TsfCFv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI~l~n-EEVr~ 736 (1080)
T KOG0566|consen 659 GNKGAVAIRFVYHA-TSFCFVCSHLAAGQSNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRIDLSN-EEVRR 736 (1080)
T ss_pred CCCceEEEEEEecc-ccEEEEecccccccchHhhhhhhHHHHHHhccccCCccccCCceEEEecccceeecCCH-HHHHH
Confidence 35678888998877 8899999999874 456888888888653 2456999999998887652 22222
Q ss_pred HHHHhhhhcCCCChhHHHHHHHhcCCceeeecccCCCCc---eEeecCCcc-ccCC-CCC--CCceEEEEECCCCCCcee
Q 012520 334 DIVKYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGECEP---VVIIAKGQN-VQGT-CKY--GTRVDYILASPDSPYKFV 406 (461)
Q Consensus 334 ~i~~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~~~---tt~~~~g~~-~~~t-~~~--~~RIDyIf~S~~~~~~~~ 406 (461)
.+.. +++....+.+++.+.+. .| .+|....++.- -||-++... ..-| .+. ..=-|.|+..+.. +.
T Consensus 737 ~v~~--~d~~kL~e~DQL~~q~~-~G--~vF~gF~E~~ltF~PTYKyD~gTd~YDTSeK~R~PAWTDRIL~r~e~---~~ 808 (1080)
T KOG0566|consen 737 LVRN--QDLDKLLEYDQLTQQMN-AG--QVFPGFHEGQLTFPPTYKYDPGTDDYDTSEKCRTPAWTDRILWRGEK---LE 808 (1080)
T ss_pred HHHh--ccHHHHhhHHHHHHHHh-cC--cccccccccccccCCcccccCCCCccccchhccCccchhhheecccc---cc
Confidence 2111 00101111122222221 11 11211122211 122222111 0001 011 1224999999984 33
Q ss_pred eeEEEEcCCCCCCCccceEEEEEecCccccc
Q 012520 407 PGSYSVISSKGTSDHHIVKVDVTKVSENAFR 437 (461)
Q Consensus 407 v~s~~vi~~~~~SDH~PV~ad~~l~~e~~~~ 437 (461)
+.+|..-+ ...|||.||+|.|...--.|++
T Consensus 809 ~l~Y~~~e-l~~SDHRPV~A~~~a~i~~Vd~ 838 (1080)
T KOG0566|consen 809 LLSYKRAE-LKTSDHRPVYAIFRAEIFEVDE 838 (1080)
T ss_pred cccccccc-ccccCCCceEEEEEEEEEEEcH
Confidence 55666554 4789999999999876543333
No 24
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=98.21 E-value=5e-06 Score=84.23 Aligned_cols=221 Identities=17% Similarity=0.098 Sum_probs=117.4
Q ss_pred HHHHHHccCCcEEEEcCccCCccCCcchHHHHHHHhCCcEEE-Eec--CCCCeeEEEEEec-cceeeEEEe--ccC-CCC
Q 012520 194 IAEVLREVDADILSLQDVKAEEENDMKPLSDLAAALGMKYVF-AES--WAPEYGNAILSKW-PIKRWKVQK--IAD-DKD 266 (461)
Q Consensus 194 i~~~I~~~~pDVV~LQEv~~~~~~~~~~l~~L~~~~g~~~~f-~~~--~~~~~GvAIlSR~-Pi~~~~~~~--l~~-~~~ 266 (461)
-..++....+|++|+||+........-.... ..+|...+ ... ..+..|+..+++. |+....... .++ ...
T Consensus 82 ~~~~~~~~l~d~~~~~~t~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~y~~~~~~~~~~p~~v~~~~~~~~s~h~~~ 158 (335)
T KOG1294|consen 82 GDPEISSELRDLQCLLETKCTIDSGPCSHPT---EKGYTHSLLSCASKKDGYSGEIDYSKFKPLKVHYGFGAMGSDHRPV 158 (335)
T ss_pred cchhccccchhhhhhhhccceeccCcceecc---cCCcccceeecccccCCccceeeeeecccceeeecccccCCccCcc
Confidence 4455666789999999997652111111111 22342222 222 2467788888884 333222222 111 122
Q ss_pred CceEEEEEEEcCCCcEEEEEEecCCCCC-----HHHH-----HHHHHHHHh-c-----CCCCEEEEecCCCCCCCCChhh
Q 012520 267 FRNVLKATVDVPWAGEVNVDSTQLDHLN-----EKWR-----MKQICAIIQ-S-----NDSPHILAGGLNSLDGSDYSAE 330 (461)
Q Consensus 267 ~R~~i~a~i~l~gg~~v~v~ntHL~~~~-----~~~R-----~~Ql~~Ll~-~-----~~~PvIL~GDFNs~~~s~~~~~ 330 (461)
.| ++.++++ .+.++++|..... ..-+ ...++..+. . ...|+++|||+|..+.......
T Consensus 159 g~-~i~~e~e-----~~~l~~~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~ 232 (335)
T KOG1294|consen 159 GR-VIIAEFE-----IFILINTYVPNIGGGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSK 232 (335)
T ss_pred ce-EEEEeec-----ceeeccccCcccccccchhhhhhhhhhHHHHHHHhhhccccccccCcceeccccccchhhccccc
Confidence 22 4444443 4667777765421 1111 122222222 1 2458999999998765532100
Q ss_pred HHHHHHHhhh-hc---CCCChhHHHH-HHHhcCC-ceeeecccCCCC---ceEeecCCccccCCCCCCCceEEEEECCCC
Q 012520 331 RWMDIVKYYE-DI---GKPTPRVEVM-KLLKGIE-YVDSKEFAGECE---PVVIIAKGQNVQGTCKYGTRVDYILASPDS 401 (461)
Q Consensus 331 ~~~~i~~~~~-~~---~~~~p~~~v~-~~L~~~g-l~Da~~~~~~~~---~tt~~~~g~~~~~t~~~~~RIDyIf~S~~~ 401 (461)
.+....+ .. +-....+..+ ..+.+.| ++|+++...... +++|.+.- .......++|+||++++...
T Consensus 233 ---~~~~~~~~~~~~~~~t~e~R~~~~~~~~~~~~~iDt~r~~~~~~~~~~t~Wk~~~--~~r~~~~~~r~dy~~Vsk~~ 307 (335)
T KOG1294|consen 233 ---PLVSPAGNTLSNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMP--NGRQRGHGERCDYILVSKPG 307 (335)
T ss_pred ---cccccccCCcCCCCCCHHHhhhHHHhhccCCcceeehhhhcCCccccccchhhcc--ccccCCCCCceeEEEecCcC
Confidence 0111111 11 1122234455 4566666 999998765433 35564211 11233568999999999986
Q ss_pred CCceeeeEEEEcCC-CCCCCccceEEEEEe
Q 012520 402 PYKFVPGSYSVISS-KGTSDHHIVKVDVTK 430 (461)
Q Consensus 402 ~~~~~v~s~~vi~~-~~~SDH~PV~ad~~l 430 (461)
.. ...++.+-.. ..+|||.|+.+.|.+
T Consensus 308 ~n--~~r~~~Ic~r~~~gsdh~pi~~~~~~ 335 (335)
T KOG1294|consen 308 PN--NGRRFYICSRPIHGSDHCPITLEFFL 335 (335)
T ss_pred CC--CCceeeeecCccCCCCCCCeeeeecC
Confidence 53 2356666665 679999999998853
No 25
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=98.17 E-value=2e-05 Score=84.53 Aligned_cols=163 Identities=15% Similarity=0.039 Sum_probs=87.2
Q ss_pred CCceEEEEEEEcCCCcEEEEEEecCCCCC----HHHHHHHHHHHHhcC----------------CCCEEEEecCCCCCCC
Q 012520 266 DFRNVLKATVDVPWAGEVNVDSTQLDHLN----EKWRMKQICAIIQSN----------------DSPHILAGGLNSLDGS 325 (461)
Q Consensus 266 ~~R~~i~a~i~l~gg~~v~v~ntHL~~~~----~~~R~~Ql~~Ll~~~----------------~~PvIL~GDFNs~~~s 325 (461)
..++++.+.+.+.+ ..|.|+|+||.+.. ...|..++..|+... ...+|++||||...+.
T Consensus 406 GNKGAVaIr~~l~~-Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl 484 (621)
T PLN03191 406 GNKGSVSISMSLFQ-SRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNM 484 (621)
T ss_pred ccceeEEEEEEEcC-cEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccC
Confidence 35778999999887 89999999998632 345777777775421 2468999999988765
Q ss_pred CChhhHHHHHH-HhhhhcCCCChhHHHHHHHhcCCceeeecccCCC-CceEeecC-CccccCC----CCCCCc----eEE
Q 012520 326 DYSAERWMDIV-KYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAGEC-EPVVIIAK-GQNVQGT----CKYGTR----VDY 394 (461)
Q Consensus 326 ~~~~~~~~~i~-~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~~~-~~tt~~~~-g~~~~~t----~~~~~R----IDy 394 (461)
.+. ..-..+. +.|..+. ...++...+.....+.-|.. ++- -+-||-+. |...... .....| -|.
T Consensus 485 ~~~-ev~~lI~~~~~~~LL---~~DQL~~e~~~g~vF~GF~E-g~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDR 559 (621)
T PLN03191 485 LDT-EVRKLVAQKRWDELI---NSDQLIKELRSGHVFDGWKE-GPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDR 559 (621)
T ss_pred CHH-HHHHHHhhccHHHHH---HHhHHHHHHHcCCccCCccc-CCccCCCCcccccCCccccccccccccCccccchhhe
Confidence 421 1111110 1111110 11233333332222222221 111 11122111 1000000 001122 499
Q ss_pred EEECCCCCCceeeeEEEEcCCCCCCCccceEEEEEecCcccccc
Q 012520 395 ILASPDSPYKFVPGSYSVISSKGTSDHHIVKVDVTKVSENAFRL 438 (461)
Q Consensus 395 If~S~~~~~~~~v~s~~vi~~~~~SDH~PV~ad~~l~~e~~~~~ 438 (461)
||+.+.. +....|... +...|||.||.+.|.+.-+.+++.
T Consensus 560 ILykg~~---i~~l~Y~s~-ei~~SDHRPV~A~F~v~V~~id~~ 599 (621)
T PLN03191 560 ILWLGKG---IKQLCYKRS-EIRLSDHRPVSSMFLVEVEVFDHR 599 (621)
T ss_pred EeecCCC---ceEeEeccC-CcccCCchhcceEEEEEEEecCHH
Confidence 9997642 566677664 357899999999999876554433
No 26
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=97.74 E-value=9.5e-05 Score=76.10 Aligned_cols=154 Identities=14% Similarity=0.025 Sum_probs=83.6
Q ss_pred ceEEEEEEEcCCCcEEEEEEecCCCC--CHHHHHHHHHHHHhc----------CCCCEEEEecCCCCCCCCChhhHHHH-
Q 012520 268 RNVLKATVDVPWAGEVNVDSTQLDHL--NEKWRMKQICAIIQS----------NDSPHILAGGLNSLDGSDYSAERWMD- 334 (461)
Q Consensus 268 R~~i~a~i~l~gg~~v~v~ntHL~~~--~~~~R~~Ql~~Ll~~----------~~~PvIL~GDFNs~~~s~~~~~~~~~- 334 (461)
++++.+++.... ..+.|++.|+.+. +-++|..+.+.+... ....++++||||....+.+.......
T Consensus 153 KGav~i~~~~~~-t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRVts~~e~v~~~~~ 231 (460)
T COG5411 153 KGAVAIRFNYER-TSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRVTSTNEEVRPEIA 231 (460)
T ss_pred ccccceeEEeec-CCcEEEecchhcccccHHHHHHHHHHHHHheecCCCceecccceEEEecccCceeecCchhcchhhh
Confidence 446666776655 6799999999874 567888887777542 13459999999977665421100000
Q ss_pred HH-HhhhhcCCCChhHHHHHHHhcCCceeeecccC----CCCceE-eecCCccccCC---CCCCCceEEEEECCCCCCce
Q 012520 335 IV-KYYEDIGKPTPRVEVMKLLKGIEYVDSKEFAG----ECEPVV-IIAKGQNVQGT---CKYGTRVDYILASPDSPYKF 405 (461)
Q Consensus 335 i~-~~~~~~~~~~p~~~v~~~L~~~gl~Da~~~~~----~~~~tt-~~~~g~~~~~t---~~~~~RIDyIf~S~~~~~~~ 405 (461)
.. +++..+ ...+++...+. .-.++.... .+.+|+ |......+... ..+.|. |.||+++.. +
T Consensus 232 ~~~g~~~~l---~~~DqL~~e~~---~g~~f~~f~E~~i~FpPTYKfd~gt~~ydtsdk~RiPsWt-DRIl~~s~~---~ 301 (460)
T COG5411 232 SDDGRLDKL---FEYDQLLWEME---VGNVFPGFKEPVITFPPTYKFDYGTDEYDTSDKGRIPSWT-DRILYKSEQ---L 301 (460)
T ss_pred CCcchhhhh---hhhhhHhhhhc---ccccccceecccccCCCceEeecCCccccccccccCCchh-hhhhhhccc---c
Confidence 00 000000 00111111111 111111111 122222 22221111111 134566 999999974 5
Q ss_pred eeeEEEEcCCCCCCCccceEEEEEecC
Q 012520 406 VPGSYSVISSKGTSDHHIVKVDVTKVS 432 (461)
Q Consensus 406 ~v~s~~vi~~~~~SDH~PV~ad~~l~~ 432 (461)
+..+|..++....|||.||++.|.+.-
T Consensus 302 ~p~sY~sip~l~~SDHrPV~a~~~~~i 328 (460)
T COG5411 302 TPHSYSSIPHLMISDHRPVYATFRAKI 328 (460)
T ss_pred ccccccccCceeecCCCeEEEEEecce
Confidence 667887777668999999999998764
No 27
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=92.15 E-value=0.39 Score=47.72 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=43.0
Q ss_pred CceEEEEEEEcCCCcEEEEEEecCCCC-------------CHHHHHHHHHHHHhc------CCCCEEEEecCCCCCCCC
Q 012520 267 FRNVLKATVDVPWAGEVNVDSTQLDHL-------------NEKWRMKQICAIIQS------NDSPHILAGGLNSLDGSD 326 (461)
Q Consensus 267 ~R~~i~a~i~l~gg~~v~v~ntHL~~~-------------~~~~R~~Ql~~Ll~~------~~~PvIL~GDFNs~~~s~ 326 (461)
-++.+.+...+.+ ..|.++|+||-+- ....|.+.+..++.. ...|+++.||||...+..
T Consensus 67 RKGfmrtrw~i~~-t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld~~ 144 (356)
T PTZ00312 67 RKGFLLLSLRLGT-VVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLDGH 144 (356)
T ss_pred ccceEEEEEEECC-EEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeeccc
Confidence 3568889999888 8899999999752 123455566666532 367899999999776643
No 28
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=81.46 E-value=2.1 Score=42.75 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=42.8
Q ss_pred eEEEEEEEcCCCcEEEEEEecCCCC-------------CHHHHHHHHHHHHhcC------CCCEEEEecCCCCCCCC
Q 012520 269 NVLKATVDVPWAGEVNVDSTQLDHL-------------NEKWRMKQICAIIQSN------DSPHILAGGLNSLDGSD 326 (461)
Q Consensus 269 ~~i~a~i~l~gg~~v~v~ntHL~~~-------------~~~~R~~Ql~~Ll~~~------~~PvIL~GDFNs~~~s~ 326 (461)
+.+.+++.+.+ +.+.++|.||-+- -...|.+++..+++.. ...+++.||||...++.
T Consensus 158 g~~~~r~~I~~-k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~ 233 (391)
T KOG1976|consen 158 GFLLARFRIHG-KEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDST 233 (391)
T ss_pred cccceeEEEcC-ceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchH
Confidence 46778888888 9999999999531 1346778888887532 34678899999888764
No 29
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=61.12 E-value=23 Score=31.33 Aligned_cols=57 Identities=12% Similarity=-0.031 Sum_probs=37.3
Q ss_pred eEEEEEEEcCCCcEEEEEEecCCCCC--HHH-HHHHHHHHHhcC-----------------CCCEEEEecCCCCCCCC
Q 012520 269 NVLKATVDVPWAGEVNVDSTQLDHLN--EKW-RMKQICAIIQSN-----------------DSPHILAGGLNSLDGSD 326 (461)
Q Consensus 269 ~~i~a~i~l~gg~~v~v~ntHL~~~~--~~~-R~~Ql~~Ll~~~-----------------~~PvIL~GDFNs~~~s~ 326 (461)
+.+...+.+.+ ..+.+++.|+.+.. ..+ |......+.+.. ..-||+.||||......
T Consensus 48 g~v~is~~~~~-~~~~~v~~hl~~~~~~~~~~r~~d~~~i~~~~~~~~~~~~~~~~~~~~~~D~v~w~GDlN~Rl~~~ 124 (145)
T KOG0565|consen 48 GGVAISFVLSQ-TSFCFVISHLTSGVHKVYERRNEDYQEILNGLRFPSVSPASEPVISDGEHDTVIWLGDLNYRLSGP 124 (145)
T ss_pred CeEEEEEEEcC-ceEEEEEecccccchhhHHHhhccHHHHHhhccccccCcccccccccccccEEEEecceeeeecCc
Confidence 35666666655 78999999998743 233 555555554310 13588999999887654
No 30
>PF15451 DUF4632: Domain of unknown function (DUF4632)
Probab=26.41 E-value=46 Score=25.23 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=16.5
Q ss_pred HHHHHHHhhhccc--cccCCCCcee
Q 012520 7 RKLWRFCSRIQCL--IRRRPRNKVI 29 (461)
Q Consensus 7 ~~~~~~~~~~~~~--~~~~~~~~~~ 29 (461)
|.||||.+|.-.+ +||||-|-.|
T Consensus 33 ralrrlwdrvl~parrwrrplpsnv 57 (71)
T PF15451_consen 33 RALRRLWDRVLAPARRWRRPLPSNV 57 (71)
T ss_pred HHHHHHHHHHHhHHHHhccCCCccc
Confidence 6788888888766 5667766544
No 31
>KOG0808 consensus Carbon-nitrogen hydrolase [Amino acid transport and metabolism]
Probab=22.16 E-value=79 Score=31.23 Aligned_cols=27 Identities=19% Similarity=0.204 Sum_probs=22.5
Q ss_pred HhhHHHHHHHHHccCCcEEEEcCccCC
Q 012520 188 AKCSRSIAEVLREVDADILSLQDVKAE 214 (461)
Q Consensus 188 ~~~~~~i~~~I~~~~pDVV~LQEv~~~ 214 (461)
..++..|++...-.+..||||||.+-.
T Consensus 99 h~r~kaiieaaa~agvniiclqeawtm 125 (387)
T KOG0808|consen 99 HDRLKAIIEAAAVAGVNIICLQEAWTM 125 (387)
T ss_pred HHHHHHHHHHHHhcCccEEEeehhhcC
Confidence 467778888888889999999999743
Done!