Query 012522
Match_columns 461
No_of_seqs 257 out of 1824
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:04:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012522hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wu9_A 3-ketoacyl-COA thiolase 100.0 8.4E-75 2.9E-79 601.1 39.7 424 36-461 17-442 (442)
2 4dd5_A Acetyl-COA acetyltransf 100.0 2.2E-70 7.4E-75 562.4 42.0 382 46-437 4-396 (396)
3 2iik_A 3-ketoacyl-COA thiolase 100.0 1.3E-70 4.5E-75 567.3 39.9 387 48-438 29-416 (418)
4 3goa_A 3-ketoacyl-COA thiolase 100.0 1.8E-70 6.2E-75 561.2 40.2 381 48-437 1-386 (387)
5 1ulq_A Putative acetyl-COA ace 100.0 1.5E-69 5.1E-74 557.2 42.2 380 49-437 2-399 (401)
6 3ss6_A Acetyl-COA acetyltransf 100.0 1.1E-69 3.8E-74 556.9 40.5 380 48-437 4-393 (394)
7 1afw_A 3-ketoacetyl-COA thiola 100.0 6.7E-70 2.3E-74 558.0 38.1 376 48-437 9-392 (393)
8 3svk_A Acetyl-COA acetyltransf 100.0 1.9E-69 6.4E-74 556.6 37.8 378 48-437 6-406 (407)
9 1wl4_A Acetyl-coenzyme A acety 100.0 1.7E-68 5.9E-73 548.7 42.6 381 48-438 5-397 (397)
10 4e1l_A Acetoacetyl-COA thiolas 100.0 1.1E-68 3.7E-73 549.9 40.1 381 48-437 4-395 (395)
11 2vu1_A Acetyl-COA acetyltransf 100.0 3.2E-68 1.1E-72 545.9 40.9 380 48-437 2-391 (392)
12 1wdk_C 3-ketoacyl-COA thiolase 100.0 5.7E-68 2E-72 543.5 39.6 382 46-437 2-389 (390)
13 2ib8_A Acetyl-COA acetyltransf 100.0 2.1E-64 7E-69 518.2 37.7 378 48-437 7-394 (395)
14 4egv_A Acetyl-COA acetyltransf 100.0 3.3E-55 1.1E-59 462.5 22.0 381 48-439 17-424 (520)
15 1e5m_A KAS II, beta ketoacyl a 100.0 2.8E-32 9.4E-37 281.3 28.1 270 76-438 79-415 (416)
16 3o04_A LMO2201 protein, beta-k 100.0 4.2E-32 1.4E-36 279.7 27.7 272 74-438 74-411 (413)
17 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 6E-33 2E-37 287.1 20.4 273 74-438 87-426 (428)
18 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 1.9E-32 6.5E-37 283.4 21.1 272 74-437 88-426 (427)
19 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 3.8E-32 1.3E-36 279.7 21.1 272 74-437 71-407 (408)
20 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 2.1E-30 7.3E-35 268.7 26.9 272 74-438 98-435 (437)
21 2wge_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-30 4.3E-35 268.8 22.9 267 75-437 84-415 (416)
22 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 2.7E-30 9.1E-35 267.6 25.1 271 75-437 100-433 (434)
23 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 5E-30 1.7E-34 266.0 25.0 271 74-437 97-437 (438)
24 3mqd_A Beta-ketoacyl synthase; 100.0 5.2E-30 1.8E-34 265.2 24.6 270 74-438 92-426 (428)
25 1tqy_B Actinorhodin polyketide 100.0 2.1E-29 7.3E-34 259.7 28.8 266 74-439 79-412 (415)
26 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 4.8E-30 1.7E-34 267.0 23.8 274 74-439 102-443 (451)
27 1tqy_A Beta-ketoacyl synthase/ 100.0 8.3E-30 2.8E-34 263.4 24.5 274 74-439 73-418 (424)
28 1ox0_A Beta ketoacyl-acyl carr 100.0 1.8E-29 6.1E-34 261.3 25.8 268 75-438 94-427 (430)
29 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 8.7E-30 3E-34 263.7 23.2 273 74-437 88-430 (431)
30 4ewg_A Beta-ketoacyl synthase; 100.0 3.3E-29 1.1E-33 258.0 25.1 269 74-438 77-411 (412)
31 2vba_A 3-oxoacyl-[acyl-carrier 100.0 3.9E-28 1.3E-32 249.5 22.7 268 74-438 71-404 (406)
32 1zow_A 3-oxoacyl-[acyl-carrier 100.0 4.6E-28 1.6E-32 240.2 21.5 256 58-436 36-310 (313)
33 2qo3_A Eryaii erythromycin pol 100.0 2E-27 6.9E-32 265.7 24.4 269 74-439 95-432 (915)
34 2hg4_A DEBS, 6-deoxyerythronol 100.0 3E-27 1E-31 264.3 23.9 268 75-439 117-454 (917)
35 1ub7_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-26 4E-31 231.1 21.7 245 70-437 46-319 (322)
36 2ebd_A 3-oxoacyl-[acyl-carrier 99.9 1.7E-26 5.7E-31 228.5 22.4 241 72-435 48-307 (309)
37 1u6e_A 3-oxoacyl-[acyl-carrier 99.9 1.8E-26 6.3E-31 230.8 21.4 248 68-437 55-332 (335)
38 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 5.2E-26 1.8E-30 227.7 23.9 254 58-435 50-330 (333)
39 3il3_A 3-oxoacyl-[acyl-carrier 99.9 1E-24 3.5E-29 217.3 26.9 243 69-435 53-320 (323)
40 1hnj_A Beta-ketoacyl-acyl carr 99.9 4.5E-25 1.6E-29 219.1 23.3 242 70-435 47-314 (317)
41 3hhd_A Fatty acid synthase; tr 99.9 6.6E-25 2.3E-29 246.4 27.2 264 75-439 81-410 (965)
42 1mzj_A Beta-ketoacylsynthase I 99.9 4.3E-25 1.5E-29 221.4 22.0 245 70-437 56-331 (339)
43 3s3l_A CERJ; acyltransferase, 99.9 3.2E-25 1.1E-29 223.9 17.0 277 57-456 36-355 (357)
44 4efi_A 3-oxoacyl-(acyl-carrier 99.9 3.1E-24 1.1E-28 216.5 23.7 247 70-438 62-344 (354)
45 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-24 3.8E-29 217.7 19.4 244 72-437 51-323 (331)
46 1u0m_A Putative polyketide syn 99.9 3.5E-25 1.2E-29 225.7 15.3 248 71-437 81-354 (382)
47 3h78_A PQS biosynthetic enzyme 99.9 4.6E-24 1.6E-28 215.5 23.2 248 70-438 70-352 (359)
48 3zen_D Fatty acid synthase; tr 99.9 7E-25 2.4E-29 265.3 19.7 279 74-441 2647-3014(3089)
49 3gwa_A 3-oxoacyl-(acyl-carrier 99.9 5.2E-24 1.8E-28 215.7 22.5 246 70-435 76-362 (365)
50 3s21_A 3-oxoacyl-[ACP] synthas 99.9 1.2E-23 4.1E-28 211.5 24.9 262 70-436 64-343 (345)
51 2h84_A Steely1; thiolase-fold, 99.9 1.3E-24 4.5E-29 220.8 13.4 247 72-437 93-371 (374)
52 4ewp_A 3-oxoacyl-[acyl-carrier 99.9 6.1E-23 2.1E-27 206.7 24.3 247 69-437 57-348 (350)
53 1ted_A PKS18; thiolase fold, s 99.9 2.6E-24 9E-29 220.1 12.5 252 72-436 111-389 (393)
54 3led_A 3-oxoacyl-acyl carrier 99.9 1.2E-22 4E-27 207.3 21.5 242 73-436 116-390 (392)
55 3oit_A OS07G0271500 protein; t 99.9 1.4E-22 4.6E-27 206.7 19.0 250 73-437 95-381 (387)
56 3il6_A 3-oxoacyl-[acyl-carrier 99.9 5.9E-22 2E-26 197.2 22.5 94 74-169 52-145 (321)
57 2uv8_A Fatty acid synthase sub 99.9 6.7E-22 2.3E-26 229.4 23.7 278 75-439 1212-1659(1887)
58 2d3m_A Pentaketide chromone sy 99.9 1.7E-21 5.9E-26 200.0 23.9 252 72-437 113-402 (406)
59 3lma_A Stage V sporulation pro 99.9 1.6E-22 5.6E-27 199.3 14.8 250 71-440 52-336 (347)
60 3ov2_A Curcumin synthase; type 99.9 1.3E-21 4.4E-26 199.9 21.7 255 73-438 101-387 (393)
61 2uv9_A Fatty acid synthase alp 99.9 1.8E-21 6.2E-26 225.3 23.4 278 75-439 1187-1640(1878)
62 3tsy_A Fusion protein 4-coumar 99.9 3.1E-21 1.1E-25 218.8 24.9 256 74-437 689-972 (979)
63 2pff_A Fatty acid synthase sub 99.9 9.4E-23 3.2E-27 229.4 9.7 276 75-439 1013-1460(1688)
64 3a5r_A Benzalacetone synthase; 99.9 9E-21 3.1E-25 193.4 22.7 254 72-440 96-385 (387)
65 1i88_A CHS2, chalcone synthase 99.9 1.5E-20 5.2E-25 191.9 23.3 253 72-437 100-386 (389)
66 3awk_A Chalcone synthase-like 99.9 1.8E-20 6.2E-25 192.1 23.2 253 72-437 113-399 (402)
67 3v7i_A Putative polyketide syn 99.9 6.7E-20 2.3E-24 187.7 26.7 257 57-437 122-411 (413)
68 2p0u_A Stilbenecarboxylate syn 99.9 1.5E-20 5.2E-25 193.2 21.5 253 72-437 118-404 (413)
69 3euo_A Type III pentaketide sy 99.9 8.1E-21 2.8E-25 193.1 18.4 257 73-436 80-376 (379)
70 1ee0_A 2-pyrone synthase; poly 99.9 3.1E-20 1.1E-24 190.4 22.5 251 72-437 105-391 (402)
71 1xes_A Dihydropinosylvin synth 99.9 2E-20 6.7E-25 192.4 21.0 250 73-437 124-409 (413)
72 3e1h_A PKSIIINC, putative unch 99.8 1.2E-20 4.2E-25 195.7 18.0 253 75-438 111-407 (465)
73 1xpm_A 3-hydroxy-3-methylgluta 99.8 9E-21 3.1E-25 193.9 15.3 243 70-441 47-322 (396)
74 2v4w_A Hydroxymethylglutaryl-C 99.8 1.8E-20 6.1E-25 193.3 16.6 112 52-168 36-151 (460)
75 2f82_A HMG-COA synthase; HMGS1 99.8 9.7E-20 3.3E-24 189.1 20.4 98 70-168 48-149 (450)
76 2vz8_A Fatty acid synthase; tr 99.8 1.7E-19 5.9E-24 219.1 20.4 264 75-439 79-408 (2512)
77 3v4n_A HMG-COA synthase; hydro 99.8 1.6E-19 5.5E-24 183.8 14.4 233 70-431 52-317 (388)
78 3sqz_A Putative hydroxymethylg 99.8 2.7E-19 9.3E-24 183.8 15.2 97 70-169 81-177 (425)
79 2p8u_A Hydroxymethylglutaryl-C 99.8 7.5E-18 2.6E-22 175.8 17.4 111 50-166 53-168 (478)
80 2wya_A Hydroxymethylglutaryl-C 99.7 4.9E-16 1.7E-20 161.8 13.6 94 70-164 50-145 (460)
81 3lma_A Stage V sporulation pro 91.7 0.39 1.3E-05 47.1 7.8 88 77-167 208-310 (347)
82 4ewp_A 3-oxoacyl-[acyl-carrier 91.1 0.99 3.4E-05 44.1 10.1 77 337-422 67-148 (350)
83 3s21_A 3-oxoacyl-[ACP] synthas 88.4 0.83 2.8E-05 44.7 7.1 82 77-166 247-334 (345)
84 3h78_A PQS biosynthetic enzyme 87.5 0.75 2.6E-05 45.4 6.2 82 76-165 254-339 (359)
85 1zow_A 3-oxoacyl-[acyl-carrier 87.0 1.3 4.3E-05 42.5 7.3 80 77-165 213-299 (313)
86 3gwa_A 3-oxoacyl-(acyl-carrier 86.8 1.5 5.3E-05 43.2 8.0 81 76-165 266-353 (365)
87 2x3e_A 3-oxoacyl-[acyl-carrier 86.8 1.2 4.1E-05 43.2 7.1 82 76-166 224-312 (331)
88 1u6e_A 3-oxoacyl-[acyl-carrier 86.2 1.4 4.8E-05 42.6 7.3 84 76-165 232-320 (335)
89 1mzj_A Beta-ketoacylsynthase I 85.6 1.6 5.4E-05 42.4 7.3 82 76-166 231-320 (339)
90 3il6_A 3-oxoacyl-[acyl-carrier 85.5 2.4 8.1E-05 41.0 8.4 69 337-412 57-130 (321)
91 3euo_A Type III pentaketide sy 84.4 2.6 8.9E-05 41.8 8.3 44 337-380 86-133 (379)
92 2ebd_A 3-oxoacyl-[acyl-carrier 84.3 2 6.8E-05 40.9 7.3 80 77-165 211-297 (309)
93 3v7i_A Putative polyketide syn 83.3 3.4 0.00012 41.6 8.7 42 337-378 142-187 (413)
94 4dfe_A 3-oxoacyl-[acyl-carrier 83.2 2.5 8.6E-05 40.9 7.5 80 76-164 234-320 (333)
95 3il3_A 3-oxoacyl-[acyl-carrier 82.9 2.7 9.1E-05 40.7 7.5 81 76-165 224-311 (323)
96 1ted_A PKS18; thiolase fold, s 82.6 1.8 6E-05 43.2 6.3 85 76-166 287-379 (393)
97 1hnj_A Beta-ketoacyl-acyl carr 82.6 4.5 0.00015 38.6 9.0 77 337-422 56-137 (317)
98 3ov2_A Curcumin synthase; type 82.3 3.1 0.00011 41.4 8.0 44 337-380 107-154 (393)
99 4efi_A 3-oxoacyl-(acyl-carrier 82.3 2.4 8E-05 41.6 7.0 83 76-166 244-332 (354)
100 4e1l_A Acetoacetyl-COA thiolas 82.2 5 0.00017 39.9 9.4 78 337-423 34-117 (395)
101 1i88_A CHS2, chalcone synthase 81.6 3.5 0.00012 40.9 8.0 76 337-421 107-188 (389)
102 3e1h_A PKSIIINC, putative unch 81.0 4 0.00014 41.7 8.3 44 337-380 115-162 (465)
103 3awk_A Chalcone synthase-like 80.9 4.5 0.00015 40.4 8.6 69 337-412 120-194 (402)
104 3a5r_A Benzalacetone synthase; 80.8 3.6 0.00012 40.8 7.7 76 337-421 103-184 (387)
105 2p0u_A Stilbenecarboxylate syn 80.6 3.6 0.00012 41.3 7.8 43 337-379 125-171 (413)
106 1ee0_A 2-pyrone synthase; poly 80.5 3.4 0.00012 41.2 7.5 69 337-412 112-186 (402)
107 3oit_A OS07G0271500 protein; t 79.9 4.5 0.00015 40.2 8.2 43 337-379 101-147 (387)
108 4dd5_A Acetyl-COA acetyltransf 79.8 6.5 0.00022 39.1 9.3 77 337-422 36-118 (396)
109 1u0m_A Putative polyketide syn 79.8 5.7 0.0002 39.2 8.9 78 337-422 89-171 (382)
110 3led_A 3-oxoacyl-acyl carrier 79.6 3.5 0.00012 41.1 7.2 75 337-422 122-202 (392)
111 2gel_A Putative GRAM negative 79.6 1.6 5.3E-05 40.3 4.3 62 73-135 33-94 (231)
112 1xes_A Dihydropinosylvin synth 79.0 3.8 0.00013 41.1 7.3 69 337-412 130-204 (413)
113 3s3l_A CERJ; acyltransferase, 78.7 6 0.0002 38.8 8.5 68 337-412 59-133 (357)
114 2d3m_A Pentaketide chromone sy 78.5 4.5 0.00015 40.4 7.7 69 337-412 120-194 (406)
115 3ss6_A Acetyl-COA acetyltransf 77.8 6.3 0.00021 39.1 8.5 77 337-422 34-116 (394)
116 2h84_A Steely1; thiolase-fold, 77.7 6.1 0.00021 38.7 8.3 78 337-422 100-182 (374)
117 3r6m_A YEAZ, resuscitation pro 77.5 1.6 5.5E-05 39.8 3.7 57 74-135 35-95 (213)
118 2f82_A HMG-COA synthase; HMGS1 77.2 8.5 0.00029 39.0 9.4 77 337-422 57-143 (450)
119 1ub7_A 3-oxoacyl-[acyl-carrier 77.1 7.2 0.00025 37.2 8.5 76 337-422 55-135 (322)
120 3tsy_A Fusion protein 4-coumar 76.9 4.9 0.00017 44.9 8.1 83 76-164 864-960 (979)
121 2a6a_A Hypothetical protein TM 75.8 1.6 5.6E-05 39.9 3.2 58 73-135 44-105 (218)
122 4egv_A Acetyl-COA acetyltransf 75.2 13 0.00046 38.4 10.3 81 77-163 318-407 (520)
123 2p8u_A Hydroxymethylglutaryl-C 74.1 9.1 0.00031 39.2 8.6 24 337-360 78-101 (478)
124 3goa_A 3-ketoacyl-COA thiolase 72.7 13 0.00045 36.7 9.3 77 337-422 32-116 (387)
125 2v4w_A Hydroxymethylglutaryl-C 70.8 7 0.00024 39.9 6.7 41 337-377 59-104 (460)
126 3svk_A Acetyl-COA acetyltransf 70.6 7.8 0.00027 38.7 7.1 75 79-161 308-390 (407)
127 1ulq_A Putative acetyl-COA ace 69.3 14 0.00048 36.7 8.6 77 337-422 31-114 (401)
128 2iik_A 3-ketoacyl-COA thiolase 66.3 18 0.00063 36.1 8.8 77 337-422 60-142 (418)
129 2wu9_A 3-ketoacyl-COA thiolase 65.4 19 0.00064 36.4 8.7 77 337-422 60-143 (442)
130 1wl4_A Acetyl-coenzyme A acety 65.0 22 0.00077 35.1 9.1 77 337-422 35-117 (397)
131 3kzu_A 3-oxoacyl-(acyl-carrier 63.2 16 0.00055 36.6 7.7 75 76-155 293-376 (428)
132 2vu1_A Acetyl-COA acetyltransf 62.2 18 0.00061 35.7 7.8 77 337-422 32-114 (392)
133 2wya_A Hydroxymethylglutaryl-C 62.2 18 0.0006 36.7 7.8 41 337-377 59-104 (460)
134 3ho9_A 3-oxoacyl-[acyl-carrier 62.0 7.1 0.00024 39.2 4.8 78 76-155 292-376 (427)
135 1j3n_A 3-oxoacyl-(acyl-carrier 58.7 8.9 0.0003 38.1 4.8 77 76-155 275-359 (408)
136 2ivn_A O-sialoglycoprotein end 58.3 7.8 0.00027 37.5 4.2 117 76-211 49-170 (330)
137 2ib8_A Acetyl-COA acetyltransf 58.2 30 0.001 34.0 8.7 77 337-422 37-119 (395)
138 1wdk_C 3-ketoacyl-COA thiolase 56.5 29 0.00098 34.2 8.1 78 337-422 35-119 (390)
139 1afw_A 3-ketoacetyl-COA thiola 55.8 40 0.0014 33.2 9.0 77 337-422 40-126 (393)
140 3eno_A Putative O-sialoglycopr 54.2 6.6 0.00023 38.2 2.9 55 75-134 53-111 (334)
141 4ewg_A Beta-ketoacyl synthase; 51.8 14 0.00049 36.7 5.0 96 51-155 259-360 (412)
142 2w6k_A COBE; biosynthetic prot 50.6 41 0.0014 28.3 7.0 61 50-125 10-70 (145)
143 2gqd_A 3-oxoacyl-[acyl-carrier 48.0 88 0.003 31.1 10.2 77 337-423 103-214 (437)
144 1e5m_A KAS II, beta ketoacyl a 47.4 95 0.0033 30.6 10.3 76 337-422 82-192 (416)
145 1tqy_A Beta-ketoacyl synthase/ 47.2 32 0.0011 34.2 6.8 79 76-155 283-367 (424)
146 1tqy_B Actinorhodin polyketide 46.3 26 0.00088 34.8 5.9 77 77-156 280-362 (415)
147 1xpm_A 3-hydroxy-3-methylgluta 46.0 9.6 0.00033 37.8 2.6 24 78-101 209-232 (396)
148 1ox0_A Beta ketoacyl-acyl carr 45.4 1.2E+02 0.0041 30.1 10.7 76 337-422 98-208 (430)
149 3o04_A LMO2201 protein, beta-k 40.9 1.5E+02 0.005 29.1 10.5 76 337-422 79-189 (413)
150 2qo3_A Eryaii erythromycin pol 40.1 1.1E+02 0.0037 33.9 10.1 100 51-155 264-373 (915)
151 4ddo_A 3-oxoacyl-[acyl-carrier 39.0 16 0.00054 36.9 3.0 78 77-155 309-391 (451)
152 3hhd_A Fatty acid synthase; tr 38.8 85 0.0029 35.0 9.1 101 51-155 246-354 (965)
153 2hg4_A DEBS, 6-deoxyerythronol 31.3 1.4E+02 0.0049 32.9 9.3 100 51-155 286-395 (917)
154 3nq4_A 6,7-dimethyl-8-ribityll 30.9 1.6E+02 0.0054 25.1 7.5 29 73-101 25-54 (156)
155 2obx_A DMRL synthase 1, 6,7-di 30.2 91 0.0031 26.6 5.9 29 73-101 24-52 (157)
156 3sqz_A Putative hydroxymethylg 29.9 28 0.00097 34.9 3.1 94 337-441 90-202 (425)
157 1kz1_A 6,7-dimethyl-8-ribityll 29.5 1.5E+02 0.0052 25.3 7.2 29 73-101 30-59 (159)
158 3ven_A O-carbamoyltransferase 29.5 21 0.00072 37.3 2.1 28 335-362 51-78 (576)
159 2ix4_A 3-oxoacyl-[acyl-carrier 28.8 2E+02 0.007 28.3 9.3 77 337-423 93-205 (431)
160 1di0_A Lumazine synthase; tran 27.9 1E+02 0.0034 26.4 5.7 29 73-101 23-51 (158)
161 1xho_A Chorismate mutase; sout 27.3 1.4E+02 0.0049 25.0 6.3 49 82-134 57-105 (148)
162 2gp6_A 3-oxoacyl-[acyl-carrier 26.4 62 0.0021 32.3 4.9 78 76-156 302-385 (434)
163 1rvv_A Riboflavin synthase; tr 26.1 1.9E+02 0.0064 24.6 7.1 29 73-101 25-53 (154)
164 2iwz_A 3-oxoacyl-[acyl-carrier 26.0 2.2E+02 0.0074 28.2 8.9 77 337-423 102-214 (438)
165 3mqd_A Beta-ketoacyl synthase; 25.5 2E+02 0.0067 28.4 8.4 77 337-423 97-208 (428)
166 1hqk_A 6,7-dimethyl-8-ribityll 23.7 1.8E+02 0.0062 24.6 6.6 29 73-101 25-53 (154)
167 3by5_A Cobalamin biosynthesis 22.6 1.3E+02 0.0044 25.6 5.4 63 45-125 4-66 (155)
168 2d0o_A DIOL dehydratase-reacti 22.4 34 0.0012 35.6 2.0 33 335-367 49-81 (610)
169 2wge_A 3-oxoacyl-[acyl-carrier 21.7 44 0.0015 33.2 2.6 26 76-101 285-310 (416)
170 3ven_A O-carbamoyltransferase 21.1 51 0.0018 34.4 3.1 47 51-103 31-77 (576)
171 1ufy_A Chorismate mutase; shik 20.7 2.4E+02 0.0082 22.9 6.3 50 82-135 27-77 (122)
172 1dbf_A Protein (chorismate mut 20.4 2E+02 0.007 23.5 5.9 50 82-135 28-78 (127)
No 1
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=8.4e-75 Score=601.06 Aligned_cols=424 Identities=79% Similarity=1.210 Sum_probs=357.3
Q ss_pred cccccCCCCCCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHH
Q 012522 36 GEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMEC 115 (461)
Q Consensus 36 ~~~~~~~~~~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a 115 (461)
|.+..++|..++|++|||||++||||++.++|+++++++.+|+.+|+++||+++|+++++||.|++|+..++...+++++
T Consensus 17 ~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a 96 (442)
T 2wu9_A 17 GDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASEC 96 (442)
T ss_dssp ---------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHH
T ss_pred CCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHH
Confidence 44455666666788999999999999984348899999999999999999999999999999999999876542246788
Q ss_pred HHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccH
Q 012522 116 RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPM 195 (461)
Q Consensus 116 ~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (461)
+.++..+|+|..+|+++|+++|+|+++||..|++.|++|++|++|++|+|.++..|+.......+.+......+....+|
T Consensus 97 ~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~m 176 (442)
T 2wu9_A 97 RMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPM 176 (442)
T ss_dssp HHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCH
T ss_pred HHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHH
Confidence 99999999976799999999999999999999999999999999999999999866532111111111111122234579
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhcc
Q 012522 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (461)
Q Consensus 196 g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~ 275 (461)
++++++|+++||+|||+||+|++++|++|..||++|+|++||+|++++.++.+.+.+...+++.||.+|+++|+|+|.++
T Consensus 177 g~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~ 256 (442)
T 2wu9_A 177 GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKL 256 (442)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcC
Confidence 99999999999999999999999999999999999999999999987533322222234679999999999999999999
Q ss_pred CCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 276 ~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
||+|+++|++|.+|||+++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||
T Consensus 257 rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 257 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp CCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred CCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999998888888888899999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCC--CCEEEEEecccCcceeEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKD--CRFGVISMCIGSGMGAAA 433 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~--~~~gl~~~~~g~G~g~A~ 433 (461)
+||+||+|+.+++.++|.||++..|+|++||++++|||.||||+++++++++||+++ + .+++|+++|.|||++.++
T Consensus 337 ~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~--~~~~~~glas~~~GGG~~~a~ 414 (442)
T 2wu9_A 337 LFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRR--GKDCRFGVVSMCIGTGMGAAA 414 (442)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--CTTCCEEEEEEEETTTEEEEE
T ss_pred EEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhcc--CCCCCEEEEEeecccchheEE
Confidence 999999999999999999999999999999999999999999999999999999998 6 899999999999999999
Q ss_pred EEEEccchhhhhcCCCCCcccccCCCCC
Q 012522 434 VFERGDCVDELCNARMVPTHTHLSKDAK 461 (461)
Q Consensus 434 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (461)
+|++.+.++.+.+++.+-.+--||||++
T Consensus 415 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (442)
T 2wu9_A 415 VFERGDGVDELRNARKVEAQGLLSKDAR 442 (442)
T ss_dssp EEEECSHHHHHHTC--------------
T ss_pred EEEeccccccCCCccchhhcccccccCC
Confidence 9999998999999999999999999984
No 2
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=2.2e-70 Score=562.45 Aligned_cols=382 Identities=41% Similarity=0.617 Sum_probs=347.1
Q ss_pred CCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC
Q 012522 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (461)
Q Consensus 46 ~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~ 125 (461)
|+|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++++++. .++.++.++..+|++
T Consensus 4 m~m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~ 81 (396)
T 4dd5_A 4 MNMREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIP 81 (396)
T ss_dssp --CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCC
T ss_pred CcCCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCC
Confidence 557899999999999998 568889999999999999999999999999999999999988876 788999999999998
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-----h-hhhhhcccccCcc
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-----K-VEIFTQARDCLLP 194 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-----~-~~~~~~~~~~~~~ 194 (461)
..+|+++|+++|+|++++|..|++.|++|++|++||+|+|++|+.|+.. +..+.. . +.....++.....
T Consensus 82 ~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
T 4dd5_A 82 VEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYH 161 (396)
T ss_dssp TTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEE
T ss_pred CCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccch
Confidence 7799999999999999999999999999999999999999999877632 111111 1 1111222333468
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhc
Q 012522 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (461)
Q Consensus 195 ~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~ 274 (461)
|++++++|+++||+|||+||+|++++|++|.+|+++|+|++||+|++++.++ ...++++|+.+|+++|+|++.+
T Consensus 162 ~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~~ 235 (396)
T 4dd5_A 162 MGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLAK 235 (396)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHhh
Confidence 9999999999999999999999999999999999999999999999875432 1357999999999999999999
Q ss_pred cCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCc
Q 012522 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 275 ~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DI 354 (461)
+||+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++.....|..++.++..+++++|+++|++++||
T Consensus 236 ~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dI 315 (396)
T 4dd5_A 236 LRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDI 315 (396)
T ss_dssp CCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999888888888889999999999999999999
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEE
Q 012522 355 NLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434 (461)
Q Consensus 355 D~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v 434 (461)
|+||+||+|+...+.+.|.||+++.|+|++||++++|||.|++|+++++++++||+++ +.++||+++|+|||+|.|++
T Consensus 316 d~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~ 393 (396)
T 4dd5_A 316 DLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--DAKTGLATLCIGGGMGTTLI 393 (396)
T ss_dssp SEEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCSEEEEEEEETTTEEEEEE
T ss_pred CEEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEEcccCCceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred EEE
Q 012522 435 FER 437 (461)
Q Consensus 435 ~~~ 437 (461)
||+
T Consensus 394 ~e~ 396 (396)
T 4dd5_A 394 VKR 396 (396)
T ss_dssp EEC
T ss_pred EeC
Confidence 985
No 3
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-70 Score=567.25 Aligned_cols=387 Identities=60% Similarity=0.970 Sum_probs=346.7
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++++|||++||||++.++|.+++.++.+|+.+|+++||+++|+++++||.|++|+.+++.. +++.++.++..+|++.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999986567889999999999999999999999999999999999887655 56788999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
+|+++|+++|+|+++||..|+++|++|++|++|++|+|.++..|+.....+.+.+.......+++.+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876532212212222111223445679999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCcccc
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~ 287 (461)
+|||+||+|++++|++|.+||++++|++||+|+++..++++ +.++..++++|+.+|+.+|+|++.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987543332 33345689999999999999999999999999999999
Q ss_pred CCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 288 ~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
+|+++++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+||+|+.+.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999998888888888899999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCC-EEEEEecccCcceeEEEEEEc
Q 012522 368 VYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR-FGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~-~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.++|.||+++.|||++||++++|||.|+||+++++++++||+++ +.+ +||+++|+|||+|.|++|++.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~--~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR--GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--CCCeeeEEEEeeccchhheEEEecc
Confidence 999999999999999999999999999999999999999999999 887 999999999999999999975
No 4
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=1.8e-70 Score=561.25 Aligned_cols=381 Identities=43% Similarity=0.642 Sum_probs=345.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
|++|+|||++||||+|..+|++++.++.+|+.+|+++||+++ |+++++||.+++|++.+++.++++.++.++..+|+|.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 468999999999999854488999999999999999999999 9999999999999988876546789999999999987
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
.+|+++|+++|+|++++|.+|++.|++|++|++|++|+|+||+.|+.....+.+.+ ..+.++. ...|++++++|+++|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~a~~~~~~~ 158 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGL-SRNVAKA-AGMMGLTAEMLSRLH 158 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTC-C--------CCCHHHHHHHHHHT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCccc-ccccccc-cccHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999987764211122211 1111222 567999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCcc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTT 285 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~l 285 (461)
|++||+||+|++++|++|.+|+++|+|++||+|++++.++ .+..+++.|+.+|+++|+|+|.++||+|+| +|++
T Consensus 159 g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~-----~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 159 GISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD-----GVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT-----SCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc-----CcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 9999999999999999999999999999999999875432 223579999999999999999999999999 9999
Q ss_pred ccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 286 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
|.+|||+++|||+++||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||+||+||+|+.
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~ 313 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA 313 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH
Confidence 99999999999999999999999999999999999999998889888899999999999999999999999999999999
Q ss_pred HHHHHHHHcCC---CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 366 QYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 366 ~~~~~~e~LGl---~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+.+.|.||+ +..|+|++||++++|||.|+||+++++++++||+++ +.++||+++|+|||+|.|++||+
T Consensus 314 ~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 314 QILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK--DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc--CCCEEEEEeccCcCceEEEEEEe
Confidence 99999999999 557899999999999999999999999999999999 99999999999999999999986
No 5
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.5e-69 Score=557.22 Aligned_cols=380 Identities=41% Similarity=0.629 Sum_probs=340.2
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.|++|+..+++.++++.++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rT~~~~-~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp -CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CceEEEEcccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 589999999999998 6688899999999999999999999999999999999998776543578899999999997678
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-hhhhh------hcc--cc--cC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-KVEIF------TQA--RD--CL 192 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-~~~~~------~~~--~~--~~ 192 (461)
|+++++++|+|+++||..|++.|++|++|++|++|+|+++..|+.. +..+.. .+.+. +.. ++ ..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999999866521 111110 01000 000 01 12
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
.+|++++++|+++||+|||++|+|++++|++|.+||++|+|++||+|++++.++ + +.++++||.+|+++|+|++
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~---~---~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGK---E---EILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHHH
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCC---C---ceeeccccccCCCCCHHHH
Confidence 458999999999999999999999999999999999999999999999874321 1 2579999999999999999
Q ss_pred hccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCC
Q 012522 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID 352 (461)
Q Consensus 273 ~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~ 352 (461)
.++||+|+++|++|.+|||+++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++
T Consensus 235 ~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 314 (401)
T 1ulq_A 235 AALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFS 314 (401)
T ss_dssp HHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGG
T ss_pred hhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999888888888999999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcce
Q 012522 353 DINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 430 (461)
Q Consensus 353 DID~~eiheafa~~~~~~~e~LGl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g 430 (461)
|||+||+||+|+.+++.++|.||+ +..|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++
T Consensus 315 dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 315 DLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--KVQFGLATMCIGVGQG 392 (401)
T ss_dssp GCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEE
T ss_pred HcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc--CCCEEEEEeecCCccc
Confidence 999999999999999999999999 457899999999999999999999999999999999 8999999999999999
Q ss_pred eEEEEEE
Q 012522 431 AAAVFER 437 (461)
Q Consensus 431 ~A~v~~~ 437 (461)
.+++|++
T Consensus 393 ~a~v~~~ 399 (401)
T 1ulq_A 393 IAVVVEG 399 (401)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999987
No 6
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-69 Score=556.94 Aligned_cols=380 Identities=41% Similarity=0.644 Sum_probs=348.7
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. ++++++.++..+|++.+
T Consensus 4 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~~ 81 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGT-FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPDT 81 (394)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCTT
T ss_pred CceEEEEEcccCCccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCCC
Confidence 6799999999999998 568889999999999999999999999999999999999988775 78899999999999877
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCC-----hhhhhhhcccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN-----PKVEIFTQARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~g~ 197 (461)
+|+++|+++|+|++++|.+|++.|++|++|++|++|+|++|..|+.. +..+. +.+.....++.....|++
T Consensus 82 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 161 (394)
T 3ss6_A 82 VTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGE 161 (394)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHH
Confidence 99999999999999999999999999999999999999999877632 21111 111111223344568999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||++||+||+|++++|++|.+||++|+|++||+|++++.++ .+.++++|+.+|+++|+|++.+++|
T Consensus 162 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~------~~~~~~~d~~~R~~~t~e~~~~~~p 235 (394)
T 3ss6_A 162 TAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR------KEVVFSKDEHPRADITAEKLAGLKP 235 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS------CEEEECSCCCCCTTCCHHHHHTCCB
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC------CceeecccccccCCCCHHHHhhCCC
Confidence 9999999999999999999999999999999999999999999875432 1257999999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+|+|++|.+|+|+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+|
T Consensus 236 vf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~v 315 (394)
T 3ss6_A 236 AFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLL 315 (394)
T ss_dssp SSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999888888888889999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+...+.+.|.||++++|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||+|.|++||+
T Consensus 316 e~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 316 EINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR--GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEETTTEEEEEEEEE
T ss_pred EeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccCcCceeEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999997
No 7
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=6.7e-70 Score=557.96 Aligned_cols=376 Identities=51% Similarity=0.804 Sum_probs=338.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcC----CCcCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR----LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~ag----l~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
|++|+|||++||||+|.++|.+++.++.+|+.+|+++||+++| +++++||.|++|+..++.. ++++++.++..+|
T Consensus 9 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va~~lG 87 (393)
T 1afw_A 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASG 87 (393)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHcC
Confidence 7899999999999998325889999999999999999999999 9999999999999887665 6788999999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC---CChhhhhhhcccccCccHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEIFTQARDCLLPMGITSE 200 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~a~ 200 (461)
++..+|+++|+++|+|+++||..|++.|++|++|++|++|+|.++..|+..... ..+.+......+..+..|++.++
T Consensus 88 l~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 167 (393)
T 1afw_A 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNE 167 (393)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHH
T ss_pred CCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHH
Confidence 976789999999999999999999999999999999999999998766531111 11111111111223467999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+|+++||+|||+||+|++++|++|.+||++|+|++||+|++++. | + ++++||.+|+++|+|++.++||+|+
T Consensus 168 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~--~--~~~~d~~~r~~~t~e~~~~~rpvf~ 238 (393)
T 1afw_A 168 NVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G--S--ICQSDEGPRPNVTAESLSSIRPAFI 238 (393)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S--C--EECSCSSCCSCCCHHHHHHCCBSCC
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C--c--eeccccccCCCCCHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999997632 2 1 7899999999999999999999998
Q ss_pred CC-CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 281 KD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 281 ~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
++ |++|.+|||+++|||+++||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+
T Consensus 239 ~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~ 318 (393)
T 1afw_A 239 KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEI 318 (393)
T ss_dssp ---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 88 99999999999999999999999999999999999999999998888888888999999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
||+|+.+++.++|.||++..|+|++||++++|||.|+||+++++++++||+++ +. |++++|+|||++.|++|++
T Consensus 319 h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--~~--gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 319 NEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD--QI--GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp CCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT--CE--EEEEEEETTTEEEEEEEEE
T ss_pred eccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc--CC--cEEEEeecccceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999998 55 9999999999999999997
No 8
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=1.9e-69 Score=556.63 Aligned_cols=378 Identities=37% Similarity=0.574 Sum_probs=322.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
+++|+|||++||||+|.+.|++++.++.+|+.+|+++||++ +|++++|||.+++|++.++..+++++++.++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 46899999999999976789999999999999999999999 99999999999999988765435789999999999987
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-CCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
.+|+++|+++|+|++++|..|+++|++|++|++|++|+|+||+.|+.... .+. .......+....+|++++++++++
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~--~~~~~~~~~~~~~~g~~Ae~~a~~ 163 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWA--TDPETNYRIGFVPQGIGADLIATL 163 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CC--CCTTTCCCCCCHHHHHHHHHHHHH
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccc--cCchhhccccccCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999987763211 110 000112234456899999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCcc
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT 285 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~l 285 (461)
|+++||+||+|++.+|++|..+.+.|+|.+||+|++.+. | ..++++|+.+|+++|+|++.++||+|+|+|.+
T Consensus 164 ~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~-----g---~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v 235 (407)
T 3svk_A 164 EGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQN-----G---LVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235 (407)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTT-----S---CEEECSCTTCCTTCCHHHHHTSCBSCC-----
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCC-----C---ceeeCCccccCCCCCHHHHhhCCCeecCCCcc
Confidence 999999999999999999999999999999999997421 1 24689999999999999999999999987765
Q ss_pred ---------------------ccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHH
Q 012522 286 ---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344 (461)
Q Consensus 286 ---------------------t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL 344 (461)
|.+|||+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|
T Consensus 236 ~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al 315 (407)
T 3svk_A 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVL 315 (407)
T ss_dssp --------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888888899999999999
Q ss_pred HHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEec
Q 012522 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424 (461)
Q Consensus 345 ~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~ 424 (461)
+++|++++|||+||+||+|+.+++.+.|.||++++|||++||++++|||+|+||+++++++++||+++ +.++||+++|
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~--~~~~gl~~~c 393 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR--NARRALITLC 393 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH--TCCEEEEEEE
T ss_pred HHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred ccCcceeEEEEEE
Q 012522 425 IGSGMGAAAVFER 437 (461)
Q Consensus 425 ~g~G~g~A~v~~~ 437 (461)
+|||++.|++||+
T Consensus 394 ~ggG~g~a~~~e~ 406 (407)
T 3svk_A 394 IGGGMGVATIIER 406 (407)
T ss_dssp CSSSCEEEEEEEE
T ss_pred ccCcceEEEEEEc
Confidence 9999999999997
No 9
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=1.7e-68 Score=548.66 Aligned_cols=381 Identities=41% Similarity=0.638 Sum_probs=343.2
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|||||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. +++.++.++..+|++..
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 5689999999999998 678899999999999999999999999999999999999887665 67899999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc----cCCCh-h-hhhh--hcccccC--ccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQVNP-K-VEIF--TQARDCL--LPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~----~~~~~-~-~~~~--~~~~~~~--~~~g~ 197 (461)
+|+++|+++|+|++.||..|++.|++|++|++|++|+|+|+..|+... ..+.. . +... ....+++ ..|++
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 999999999999999999999999999999999999999997665321 11110 0 1000 0011222 56999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||+|||+||+|++++|++|.+||..|+|++||+|++++.++ .+.++++|+.+|+++|+|++.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK------GLIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT------EEEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC------CceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875431 1257889999999999999999999
Q ss_pred CCCCC--CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 278 AFKKD--GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 278 vf~~~--g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
+|+++ |++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99984 9999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
+||+||+|+.+.+.+.|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--GRSRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc--CCCEEEEEEecccchheEEEE
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred EEc
Q 012522 436 ERG 438 (461)
Q Consensus 436 ~~~ 438 (461)
+++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 973
No 10
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=1.1e-68 Score=549.94 Aligned_cols=381 Identities=43% Similarity=0.618 Sum_probs=347.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. ++++++.++..+|++..
T Consensus 4 m~~v~Ivg~~rT~~g~-~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~~ 81 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGS-FGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPNS 81 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCTT
T ss_pred CCeEEEEECccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCCC
Confidence 6799999999999998 568889999999999999999999999999999999999987765 78899999999999878
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-----hh-hhhhcccccCccHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-----KV-EIFTQARDCLLPMG 196 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-----~~-~~~~~~~~~~~~~g 196 (461)
+|+++|+++|+|++++|..|++.|++|++|++||+|+|+||+.|+.. +..+.. .+ .....++.....|+
T Consensus 82 ~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (395)
T 4e1l_A 82 VPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMG 161 (395)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHH
T ss_pred ceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHH
Confidence 99999999999999999999999999999999999999999866521 111111 00 11112223335799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
+.+++|+++||++||++|+|++++|++|.+|+++|+|++||+|++++.++ .+..++++|+.+|+++|+|++.+++
T Consensus 162 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~-----g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 162 ITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR-----GKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET-----TEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC-----CcceEECCccccCCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875432 1235789999999999999999999
Q ss_pred CCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 277 pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
|+|+++|++|.+|||+++|||+++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDL 316 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888888889999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
||+||+|+...+.+.|.||++++|+|++||++++|||.|+||+++++++++||+++ +.+++++++|+|||+|.|++||
T Consensus 317 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 317 IEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR--KVETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--TCSEEEEEEESSTTEEEEEEEE
T ss_pred EEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccCCCceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999 8999999999999999999998
Q ss_pred E
Q 012522 437 R 437 (461)
Q Consensus 437 ~ 437 (461)
+
T Consensus 395 ~ 395 (395)
T 4e1l_A 395 R 395 (395)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=3.2e-68 Score=545.90 Aligned_cols=380 Identities=43% Similarity=0.638 Sum_probs=342.4
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... +++.++.++..+|++..
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 5689999999999998 678899999999999999999999999999999999999887665 67899999999999655
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc----cccCCC-----hh-hhhhhcccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVGQVN-----PK-VEIFTQARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~----~~~~~~-----~~-~~~~~~~~~~~~~~g~ 197 (461)
+|+++++++|+|++.||..|++.|++|++|++|++|+|+|+..|+. .+..+. +. +......+.....|++
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 8999999999999999999999999999999999999999886652 111111 00 0000111122346999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||+|||++|+|++++|++|.+||++|+|++||+|++.+.++ | ...+++||.+|+++|+|++.++||
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~---~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRK---G---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTT---C---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCC---C---ceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999864221 1 257899999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+++|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999888888888899999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+.+.|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR--GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc--CCCEEEEEEecccchheEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999999999986
No 12
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=5.7e-68 Score=543.54 Aligned_cols=382 Identities=41% Similarity=0.614 Sum_probs=343.1
Q ss_pred CCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC
Q 012522 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (461)
Q Consensus 46 ~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl 124 (461)
|+|++|+|||++||||+|.++|.+++.++.+|+.+|+++||+++ |+++++||.+++|+..+++..+++.++.++..+|+
T Consensus 2 ~~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl 81 (390)
T 1wdk_C 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (390)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC
Confidence 34679999999999999832688999999999999999999999 99999999999999877654357789999999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCC-ChhhhhhhcccccCccHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-NPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+.++|.++++++|+|++.||..|++.|++|++|++|++|+|.++..|+... .+ ...+... .++.+.+|++++++|+
T Consensus 82 ~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~-~~~~~~~~~~--~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG-VDPNPHMSLY--AAKASGMMGLTAEMLG 158 (390)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTT-BCCCGGGGGT--SCGGGGSHHHHHHHHH
T ss_pred CCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccc-cccCcccccc--CCcchhHHHHHHHHHH
Confidence 778999999999999999999999999999999999999999987665321 11 1112111 1333456999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-C
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-D 282 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~ 282 (461)
++||+|||++|+|++++|++|.+|+++|+|.+||+|++.+.+. .+...+++||++|+++|+|++.++||+|+| +
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~-----~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~ 233 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDEN-----GFLKIFDYDETIRPDTTLESLAALKPAFNPKG 233 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTT-----CCEEEECSCTTCCTTCCHHHHHTSCCSSCTTT
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCC-----CcceeeccccccCCCCCHHHHhcCCCcccCCC
Confidence 9999999999999999999999999999999999998752110 011468999999999999999999999999 9
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
|++|++|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+||+
T Consensus 234 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 234 GTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp CCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred CcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 99999999999999999999999999999999999999999988888888888999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 363 FASQYVYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 363 fa~~~~~~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+.+.+.+.|.||++ ..|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|++
T Consensus 314 f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 314 FAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp BHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc--CCCEEEEEecccchheEEEEEEe
Confidence 999999999999999 67999999999999999999999999999999999 89999999999999999999986
No 13
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=2.1e-64 Score=518.18 Aligned_cols=378 Identities=34% Similarity=0.522 Sum_probs=337.3
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|++.+
T Consensus 7 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~~ 84 (395)
T 2ib8_A 7 LKEVVIVSATRTPIGS-FLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPIS 84 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCeEEEecccccccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCCC
Confidence 5789999999999998 568888999999999999999999999999999999999887766 78899999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc---CCC-----hh-hhhhhcccccCccHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---QVN-----PK-VEIFTQARDCLLPMGIT 198 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~---~~~-----~~-~~~~~~~~~~~~~~g~~ 198 (461)
+|+++++++|+|++.||..|++.|++|++|++|++|+|.++..|+.... .+. +. ......+.....+|+++
T Consensus 85 ~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ 164 (395)
T 2ib8_A 85 TPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSC 164 (395)
T ss_dssp CCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHH
T ss_pred ceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHH
Confidence 9999999999999999999999999999999999999999986652110 010 00 00111122234579999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
+++|+++||+|||++++|++++|+||.+|+++++|++||.|+++..+. .++.+++.||.+| ++++|++.++||+
T Consensus 165 a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~-----~p~~~~~~D~~~r-~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 165 AENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKG-----QPDVVVKEDEEYK-RVDFSKVPKLKTV 238 (395)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTT-----SCCEEECSCSGGG-SCCTTTGGGSCCT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccC-----Ccceeeccccccc-cCCHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999874320 1135789999999 5899999999999
Q ss_pred CCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 279 FKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 279 f~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|.+ +|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+|
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~i 318 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 318 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEE
Confidence 954 8999999999999999999999999999999999999999998877887777888999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+..+|.||+++.|+|++||++++|||.|+||+++++++++|||+ +++|++++|+|||++.|++|++
T Consensus 319 e~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~----~~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 319 EVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ----GEYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT----TCEEEEEEEETTTEEEEEEEEE
T ss_pred EEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh----CCceEEEEecccCHhheEEEEc
Confidence 999999999999999999999999999999999999999999999999999985 4789999999999999999997
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.3e-55 Score=462.53 Aligned_cols=381 Identities=14% Similarity=0.125 Sum_probs=296.5
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCC-----------ccchHHH
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-----------TRAMECR 116 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~-----------~~~~~a~ 116 (461)
++++||||+++||+.+ .+|.+++.++.||+.+|+++||+|+||++++||.+|.|++..... ...+.++
T Consensus 17 PRtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~ 95 (520)
T 4egv_A 17 PRTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPR 95 (520)
T ss_dssp TTCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHH
T ss_pred CCCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHH
Confidence 6789999999999975 568889999999999999999999999999999888776543221 1346788
Q ss_pred HHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc--CCChhhhhhhcccccCcc
Q 012522 117 MAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG--QVNPKVEIFTQARDCLLP 194 (461)
Q Consensus 117 ~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (461)
.++..+|++ ..+.++++.+|+|++++|..|++.|++|++|++|++|+|+||+.|+.... .............+....
T Consensus 96 ~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (520)
T 4egv_A 96 SVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYG 174 (520)
T ss_dssp HHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------
T ss_pred HHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccc
Confidence 999999996 47889999999999999999999999999999999999999997763211 111111111112233446
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhc
Q 012522 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (461)
Q Consensus 195 ~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~ 274 (461)
++..++.+..+||+++++++.++..++.++......+.|++||.|+.++.. +....++|+.+|+++|+|++.+
T Consensus 175 ~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~-------~~a~~np~a~~r~~~t~E~l~~ 247 (520)
T 4egv_A 175 YDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFS-------KVAAKNPYSSAPTERSVEELLT 247 (520)
T ss_dssp ------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-------HHHHHCTTSSSCCCCCHHHHHS
T ss_pred cchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecc-------cccccCccccccCCCCHHHhcc
Confidence 777788899999999999999999999999988888889999999877542 2234677889999999999999
Q ss_pred cCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC--------CCcHHHHHHHHH
Q 012522 275 LKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM--------GIGPAVAIPAAV 344 (461)
Q Consensus 275 ~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~--------~~~~~~ai~~aL 344 (461)
++|.|.+ +++.|.+|||+++|||+|+||++++.|+++|++|+++|.+++....++..+ +.++..+++++|
T Consensus 248 l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al 327 (520)
T 4egv_A 248 VTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEAL 327 (520)
T ss_dssp CCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHH
T ss_pred cCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHH
Confidence 9998865 788899999999999999999999999999999998888888776554433 335678999999
Q ss_pred HHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEE
Q 012522 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVI 421 (461)
Q Consensus 345 ~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~ 421 (461)
+++||+++|||+||+||||+++.+.++|.|||+. .|+|++||++++|||.+++|++.++++++|||++ ..+++|+
T Consensus 328 ~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~--~~~~~L~ 405 (520)
T 4egv_A 328 RVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDK--PGQFALV 405 (520)
T ss_dssp HHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHS--TTCEEEE
T ss_pred HHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcC--CCCceEE
Confidence 9999999999999999999999999999999964 5899999999999999999999999999999999 8899999
Q ss_pred EecccCcc-eeEEEEEEcc
Q 012522 422 SMCIGSGM-GAAAVFERGD 439 (461)
Q Consensus 422 ~~~~g~G~-g~A~v~~~~~ 439 (461)
+.++|-.. ..+++|.++.
T Consensus 406 ~~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 406 GANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp EEEETTTTEEEEEEEESSC
T ss_pred eCCCCeeeeeeEEEEcCCC
Confidence 86544433 3556666553
No 15
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=2.8e-32 Score=281.31 Aligned_cols=270 Identities=19% Similarity=0.253 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcCCCC
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lGl~~ 126 (461)
+|+.+++++||+++|+++++|| .|++|+..++.. . ....+..++..+|+
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-- 156 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC--
Confidence 8999999999999999999999 799998765410 0 12468889999999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccc-cccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM-TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+ +...+ .+
T Consensus 157 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~----------------------~~--------- 205 (416)
T 1e5m_A 157 KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY----------------------AG--------- 205 (416)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH----------------------HH---------
T ss_pred CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH----------------------HH---------
Confidence 57999999999999999999999999999999999999985 43110 00
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
+. ..+.+.. ++. ++++ .++| |+. +|
T Consensus 206 ---------------~~------~~~~ls~-------~~~------------~p~~------------~~rp-fd~~~~G 232 (416)
T 1e5m_A 206 ---------------FA------SARALSF-------RND------------DPLH------------ASRP-FDKDRDG 232 (416)
T ss_dssp ---------------HH------HTTCBCC-------CTT------------CGGG------------TCCT-TBTTCCS
T ss_pred ---------------HH------HcCCccC-------CCC------------CCcc------------cccc-CccCCCC
Confidence 00 0011100 000 0111 3455 664 56
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+++||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+||
T Consensus 233 ~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 305 (416)
T 1e5m_A 233 FV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYIN 305 (416)
T ss_dssp BC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEE
Confidence 66 999999999999999999999999999999887643 444556678999999999999999999999
Q ss_pred ecCCChHH----HHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 359 INEAFASQ----YVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 359 iheafa~~----~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
+|++++.. +.. ..+.+|....++++++.+..+|||.||+|+.++++++++|+++ ++
T Consensus 306 ~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~ 385 (416)
T 1e5m_A 306 AHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP 385 (416)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB
T ss_pred EECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence 99998862 222 2344555445678888888899999999999999999999986 11
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++++.||.+.++||++.
T Consensus 386 ~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 386 GQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 347889988877888889998763
No 16
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=4.2e-32 Score=279.69 Aligned_cols=272 Identities=20% Similarity=0.253 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCC-----------------C--------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG-----------------S--------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~-----------------~--------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| .|++|+..+.. . .....+..++..+|+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 356999999999999999999999 99999864211 0 011247789999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|+++||..|+++|++|++|++||+|+|.+..... .
T Consensus 154 --~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~------------------------~------- 200 (413)
T 3o04_A 154 --KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS------------------------L------- 200 (413)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH------------------------H-------
T ss_pred --CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH------------------------H-------
Confidence 5799999999999999999999999999999999999999655100 0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+.+.. . .+++. .++| |+. +
T Consensus 201 --------------~~~~------~~~~ls~--------~------------~~p~~------------~~~p-fd~~~~ 227 (413)
T 3o04_A 201 --------------AGFT------ANKALSL--------N------------PDPET------------ACRP-FDKDRD 227 (413)
T ss_dssp --------------HHHH------HTTCBCC--------C------------CCTTT------------SCCT-TBTTCC
T ss_pred --------------HHHH------hcccccC--------C------------CCCCC------------CcCC-CcCCCC
Confidence 0000 0001100 0 00111 2445 554 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|++++.+++++|.+++.... .|...+.++..+++++|+++|++++|||+|
T Consensus 228 g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v 300 (413)
T 3o04_A 228 GFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYI 300 (413)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 666 99999999999999999999999999999987653 344445567899999999999999999999
Q ss_pred EecCCChH----HHHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EINEAFAS----QYVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eiheafa~----~~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+|..++. .+...+ +.++....++|+++++..+|||.||+|+.++++++++|+++ +
T Consensus 301 e~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 380 (413)
T 3o04_A 301 NAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYV 380 (413)
T ss_dssp ECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCC
T ss_pred EEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccC
Confidence 99999886 222222 23455556899999999999999999999999999999976 1
Q ss_pred ------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 ------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++.||.+.++||++.
T Consensus 381 ~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 381 PNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp BSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 1357899999888999999999875
No 17
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=6e-33 Score=287.12 Aligned_cols=273 Identities=20% Similarity=0.273 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-cC----eEEEEeecCC--------------------------CCccchHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAP--------------------------GSTRAMECRMAAFYA 122 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~-Id----~vi~g~~~~~--------------------------~~~~~~~a~~ia~~l 122 (461)
..+|+.+|+++||+++|+++++ || .+++|+..+. .. ....+..++..+
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~is~~l 165 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL-INLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC-TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch-hhhHHHHHHHHc
Confidence 4689999999999999999998 88 6888875321 11 234677899999
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHH
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV 202 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 202 (461)
|+ ++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+.... .
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~------------------------~------ 213 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRI------------------------S------ 213 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH------------------------H------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHH------------------------H------
Confidence 99 579999999999999999999999999999999999999854400 0
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-
Q 012522 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK- 281 (461)
Q Consensus 203 ~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~- 281 (461)
+..|. + .+.+. .+. ..+.-..++| |+.
T Consensus 214 ----------~~~~~---------~--~~~ls------------------------~~~------~~~~~~~~~p-fd~~ 241 (428)
T 3kzu_A 214 ----------LAGFA---------A--CKALS------------------------TER------NDDPTAASRP-YDED 241 (428)
T ss_dssp ----------HHHHH---------H--TTCBC------------------------CSC------TTSGGGTCCT-TBTT
T ss_pred ----------HHHHH---------H--ccccc------------------------cCc------cCCcccccCC-cccC
Confidence 00000 0 00010 000 0001123455 543
Q ss_pred -CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 282 -~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
+|++ ++|||+|+||++.+.|++++.+++++|.+++... ..|...+.++..+++++|+++|++++|||
T Consensus 242 ~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 314 (428)
T 3kzu_A 242 RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEID 314 (428)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHee
Confidence 5666 8999999999999999999999999999998876 34555666788999999999999999999
Q ss_pred EEEecCCChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------
Q 012522 356 LFEINEAFAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------- 413 (461)
Q Consensus 356 ~~eiheafa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------- 413 (461)
++|.|++++. ......+.++.+..++|++|++.++|||.||+|+.++++++++|+++ +
T Consensus 315 ~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 394 (428)
T 3kzu_A 315 YINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDL 394 (428)
T ss_dssp EEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBC
T ss_pred EEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCccc
Confidence 9999966663 33344455677778999999999999999999999999999999986 1
Q ss_pred -------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 -------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 -------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++.||.+.++||++-
T Consensus 395 ~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 395 VPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp CBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 1347889988888888999999864
No 18
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=1.9e-32 Score=283.42 Aligned_cols=272 Identities=19% Similarity=0.266 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 357899999999999999999999 588887643210 012367789999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++... ..
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~------------------------~~------- 214 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPL------------------------GV------- 214 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH------------------------HH-------
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHH------------------------HH-------
Confidence 579999999999999999999999999999999999999997510 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+.+. .+ ..+. -..++| |+. +
T Consensus 215 --------------~~~~------~~~~ls------------------------~~-----~~~~--~~~~~p-fd~~~~ 242 (427)
T 3ho9_A 215 --------------GGFG------AARALS------------------------TR-----NDNP--QAASRP-WDKERD 242 (427)
T ss_dssp --------------HHHH------HTTCBC------------------------CC-----TTCH--HHHCCT-TBTTCC
T ss_pred --------------HHHH------hccCcc------------------------cC-----CCCC--CcccCC-ccCCCC
Confidence 0000 000010 00 0001 114566 543 6
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||+|
T Consensus 243 G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 315 (427)
T 3ho9_A 243 GFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYV 315 (427)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEE
Confidence 777 99999999999999999999999999999987652 445556678899999999999999999999
Q ss_pred Eec-----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EIN-----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eih-----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+| +.+........+.++....++|+++++.++|||.||+|+.++++++++|+++ +
T Consensus 316 e~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 395 (427)
T 3ho9_A 316 NAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV 395 (427)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCC
T ss_pred EecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccc
Confidence 999 5555566666777888888999999999999999999999999999999976 1
Q ss_pred -------CCCCEEEEEecccCcceeEEEEEE
Q 012522 414 -------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 -------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++.+++++++++.||.+.++||++
T Consensus 396 ~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 396 PHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp BSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 145789999988889899999875
No 19
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=3.8e-32 Score=279.66 Aligned_cols=272 Identities=22% Similarity=0.325 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++||. +++|+..+++. .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (408)
T 1j3n_A 71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF 150 (408)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC
Confidence 4789999999999999999999995 77776654321 011467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+... +...
T Consensus 151 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~~~~------ 198 (408)
T 1j3n_A 151 --TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITP------------------------MAIG------ 198 (408)
T ss_dssp --CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHHH------
T ss_pred --CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCH------------------------HHHH------
Confidence 46999999999999999999999999999999999999986540 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
.+. . .+.+. +. ..+.+ ..++| ||. +
T Consensus 199 ---------------~~~----~--~~~ls------------------------~~-----~~~p~--~~~~p-fd~~~d 225 (408)
T 1j3n_A 199 ---------------AFA----V--MRALS------------------------TR-----NEEPE--KASRP-FTLSRD 225 (408)
T ss_dssp ---------------HHH----H--TTCBC------------------------CC-----TTCHH--HHCCT-TBTTCC
T ss_pred ---------------HHH----h--ccccc------------------------CC-----CCCCC--cCccc-CcCCCC
Confidence 000 0 00110 00 00111 24566 653 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+++||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+|
T Consensus 226 g~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 298 (408)
T 1j3n_A 226 GFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYI 298 (408)
T ss_dssp CBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 666 8999999999999999999999999999988765 2344455677899999999999999999999
Q ss_pred EecCCChHH-----HHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------C
Q 012522 358 EINEAFASQ-----YVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------G 413 (461)
Q Consensus 358 eiheafa~~-----~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~ 413 (461)
|.|++++.. .....+.+|.+..++|+++++..+||+.||+|+.++++++++|+++ +
T Consensus 299 e~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v 378 (408)
T 1j3n_A 299 NAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFV 378 (408)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCC
T ss_pred EEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccC
Confidence 999999874 3445566777777899999999999999999999999999999986 1
Q ss_pred C-----CCCEEEEEecccCcceeEEEEEE
Q 012522 414 K-----DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 ~-----~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+ +.+++++++++-||.+.++||++
T Consensus 379 ~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 379 PEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp SSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 1 34788888887788899999875
No 20
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.97 E-value=2.1e-30 Score=268.69 Aligned_cols=272 Identities=20% Similarity=0.292 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| .|++|+..++.. .....+..++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 368999999999999999999999 999998765410 012467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
+.|+++|+++|+|++.||..|++.|++|++|++||+|+|.+.. |. ..
T Consensus 178 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~-----------------------~~------- 224 (437)
T 2gqd_A 178 --KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HM-----------------------AI------- 224 (437)
T ss_dssp --CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH-----------------------HH-------
T ss_pred --CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH-----------------------HH-------
Confidence 5699999999999999999999999999999999999998654 10 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+. ++.++.+. ..++| ||. +
T Consensus 225 --------------~~~~------~~~~------------------------ls~~~~p~--------~~~~p-fd~~~~ 251 (437)
T 2gqd_A 225 --------------AGFS------ASRA------------------------LSTNDDIE--------TACRP-FQEGRD 251 (437)
T ss_dssp --------------HHHH------HTTC------------------------BCCCCCTT--------TSSCT-TCTTCC
T ss_pred --------------HHHH------hccC------------------------ccCCCCCc--------cccCC-CCCCCC
Confidence 0000 0111 11111110 13556 764 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+|
T Consensus 252 G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~v 324 (437)
T 2gqd_A 252 GFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYL 324 (437)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEE
Confidence 666 999999999999999999999999999999887643 33334566789999999999999999999
Q ss_pred EecCCChHH----HHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EINEAFASQ----YVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eiheafa~~----~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+|++++.. +.. ..+.+|....++++++.+..+||+.||+|+.++++++++|+++ +
T Consensus 325 e~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v 404 (437)
T 2gqd_A 325 NAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 404 (437)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCC
T ss_pred EEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccC
Confidence 999999874 332 2344555556788888888899999999999999999999986 1
Q ss_pred C------CCCEEEEEecccCcceeEEEEEEc
Q 012522 414 K------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ~------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+ +.+++++++++-||.+.++||++.
T Consensus 405 ~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 405 PNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp BSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 1 347888888877888899998864
No 21
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.97 E-value=1.3e-30 Score=268.78 Aligned_cols=267 Identities=21% Similarity=0.248 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------cchHHHHHHHHcCCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAGFP 125 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl~ 125 (461)
.+|+.+++++||+++|+ +++| +|++|+..+++.. ....+..++..+|+
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 160 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA- 160 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc-
Confidence 47999999999999998 4555 3999987665410 01357789999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++++++|+|++.||..|+++|++|++|++|++|+|.++.... ..++
T Consensus 161 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~---------------------~~~~-------- 210 (416)
T 2wge_A 161 -RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP---------------------IAAF-------- 210 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH---------------------HHHH--------
T ss_pred -CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH---------------------HHHH--------
Confidence 5799999999999999999999999999999999999999876100 0000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
.. .+.+.. .. .+++. .++| |+. +|
T Consensus 211 --------------------~~--~~~l~~-------~~------------~~~~~------------~~~p-fd~~~dg 236 (416)
T 2wge_A 211 --------------------SM--MRAMST-------RN------------DEPER------------ASRP-FDKDRDG 236 (416)
T ss_dssp --------------------HT--TTCBCC-------CT------------TSGGG------------SCCT-TBTTCCC
T ss_pred --------------------Hh--cchhhc-------cc------------cCCcc------------cccc-cccCCCC
Confidence 00 001100 00 00111 2345 653 55
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.++..+++++|+++|++++|||+||
T Consensus 237 ~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 309 (416)
T 2wge_A 237 FV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVN 309 (416)
T ss_dssp BC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred cc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 55 9999999999999999999999999999988765 34555566788999999999999999999999
Q ss_pred ecCCChHH----HHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------------------
Q 012522 359 INEAFASQ----YVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------------- 413 (461)
Q Consensus 359 iheafa~~----~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------------- 413 (461)
+|.+++.. +...++.++. .++++++++..+|||.||+|+.++++++++|+++ +
T Consensus 310 ~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~ 387 (416)
T 2wge_A 310 AHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAG 387 (416)
T ss_dssp CCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCS
T ss_pred ECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCC
Confidence 99998874 6666666643 3678888889999999999999999999999986 1
Q ss_pred ----CCCCEEEEEecccCcceeEEEEEE
Q 012522 414 ----KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 ----~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
.+.+++++++++.||.+.++||++
T Consensus 388 ~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 388 EPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp SCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 134788888887788888888875
No 22
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.7e-30 Score=267.57 Aligned_cols=271 Identities=21% Similarity=0.234 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHcCCC---cCCcCeEEEEeecCCCCc-------------------------cchHHHHHHHHcCCCC
Q 012522 75 DDLLAPVLKAVIEKTRLN---PSEVGDIVVGTVLAPGST-------------------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~---~~~Id~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl~~ 126 (461)
.+|+.+++++||+++|++ +++| .|++|+..+++.. ....+..++..+|+
T Consensus 100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl-- 176 (434)
T 2gp6_A 100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA-- 176 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC--
Confidence 679999999999999983 3334 5888887654310 01357789999999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
++|+++|+++|+|++.||..|+++|++|++|++|++|+|.++...
T Consensus 177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------------------------- 221 (434)
T 2gp6_A 177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAV----------------------------------- 221 (434)
T ss_dssp CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHH-----------------------------------
T ss_pred CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHH-----------------------------------
Confidence 579999999999999999999999999999999999999987610
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 284 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~ 284 (461)
.++..++.+ + .+. ....+ +++ .++| |+. +|+
T Consensus 222 --------~~~~~~~~~------~-~ls-------~~~~~------------p~~------------~~~p-fd~~~~g~ 254 (434)
T 2gp6_A 222 --------PIAGFAQMR------I-VMS-------TNNDD------------PAG------------ACRP-FDRDRDGF 254 (434)
T ss_dssp --------HHHHHHTTT------S-SCC-------CCTTC------------TTT------------SCCS-SBTTCCCC
T ss_pred --------HHHHHHHHH------H-Hhc-------CCCCC------------CCC------------ceec-ccccCCCc
Confidence 000000000 0 000 00000 111 3455 553 555
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+||+
T Consensus 255 v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 327 (434)
T 2gp6_A 255 V-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNA 327 (434)
T ss_dssp C-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEEC
T ss_pred c-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 5 9999999999999999999999999999988765 234445567789999999999999999999999
Q ss_pred cCCChHH-HHHHHHHcC--CCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC---------------------
Q 012522 360 NEAFASQ-YVYCIKKLG--LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK--------------------- 414 (461)
Q Consensus 360 heafa~~-~~~~~e~LG--l~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~--------------------- 414 (461)
|...+.. .....+.|+ +...++|++|++.++|||.||+|+.++++++++|+++ +|
T Consensus 328 Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 407 (434)
T 2gp6_A 328 HATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEP 407 (434)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSC
T ss_pred eCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCc
Confidence 9544322 122222222 1233899999999999999999999999999999987 11
Q ss_pred ---CCCEEEEEecccCcceeEEEEEE
Q 012522 415 ---DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ---~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+++++++++.||.+.++||++
T Consensus 408 ~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 408 RPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 34788998888888889999875
No 23
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.97 E-value=5e-30 Score=265.95 Aligned_cols=271 Identities=21% Similarity=0.264 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHcCCCc-CCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~-~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+++ ++|| .|++|+..++.. .....+..++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 46799999999999999998 8888 699998765420 01247888999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ +.|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 177 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-----------------------~~------ 224 (438)
T 2iwz_A 177 L--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PL-----------------------SL------ 224 (438)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH-----------------------HH------
T ss_pred C--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HH-----------------------HH------
Confidence 9 5699999999999999999999999999999999999998543 10 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
..+. ..+.+... .+| + ..++| |+.
T Consensus 225 ---------------~~~~------~~~~ls~~--------~~p------------~------------~~~~p-fd~~~ 250 (438)
T 2iwz_A 225 ---------------AGFS------RARALSTN--------SDP------------K------------LACRP-FHPKR 250 (438)
T ss_dssp ---------------HHHH------HTTCBCCC--------SCT------------T------------TSCCT-TCTTC
T ss_pred ---------------HHHH------hcCCcCCC--------CCC------------C------------ccccc-CCCCC
Confidence 0000 01111100 000 1 13456 665
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+
T Consensus 251 ~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ 323 (438)
T 2iwz_A 251 DGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISY 323 (438)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 6666 999999999999999999999999999999886543 4445567789999999999999999999
Q ss_pred EEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------
Q 012522 357 FEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------- 414 (461)
Q Consensus 357 ~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------- 414 (461)
||+|++++.. +...+ +.+|....++++++.+..+|||.||+|+.++++++++|+++ +|
T Consensus 324 ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~ 403 (438)
T 2iwz_A 324 INAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNY 403 (438)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBC
T ss_pred EEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc
Confidence 9999999863 33322 34454445677888888899999999999999999999986 11
Q ss_pred -----------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 -----------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 -----------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+++++++++.||.+.++||++
T Consensus 404 v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 404 VPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp CBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 15788988887788889999875
No 24
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.97 E-value=5.2e-30 Score=265.18 Aligned_cols=270 Identities=17% Similarity=0.184 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| +|++|+..+++. ....++..++..+|+
T Consensus 92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 171 (428)
T 3mqd_A 92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI 171 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence 467999999999999999999999 688887654311 012467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|+++||..|+++|++|++|++|++|+|.++..+.. +
T Consensus 172 --~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~----------------------~-------- 219 (428)
T 3mqd_A 172 --KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV----------------------L-------- 219 (428)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH----------------------H--------
T ss_pred --CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH----------------------H--------
Confidence 57999999999999999999999999999999999999998862110 0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
+. ..+.+. .+. ..+.-..++| |+. +
T Consensus 220 ----------------~~------~~~~ls------------------------~~~------~~~p~~~~rp-fd~~~~ 246 (428)
T 3mqd_A 220 ----------------FD------AMGAMS------------------------SKY------NDTPSTASRA-YDKNRD 246 (428)
T ss_dssp ----------------HH------HTTCBC------------------------CTT------TTSGGGSCCT-TBTTCC
T ss_pred ----------------HH------Hhhhhc------------------------ccc------cCCcccccCc-ccCCCC
Confidence 00 000000 000 0000113456 654 6
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
|++ ++|||+++||++.+.|+++|.+|+++|.+++....... ..+.++..+++++|+ |++ +||||||.
T Consensus 247 G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~ 316 (428)
T 3mqd_A 247 GFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINP 316 (428)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEEC
T ss_pred Ccc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEE
Confidence 777 89999999999999999999999999999998763322 245678899999999 999 99999999
Q ss_pred cCCChH----HHHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------------------
Q 012522 360 NEAFAS----QYVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------------- 413 (461)
Q Consensus 360 heafa~----~~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------------- 413 (461)
|...+. .+.. ..+.++....++++++.+..+|||.||+|+++++.++++|+++ +
T Consensus 317 HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~ 396 (428)
T 3mqd_A 317 HATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR 396 (428)
T ss_dssp CCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS
T ss_pred eCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC
Confidence 988775 2222 2344564445578888899999999999999999999999976 1
Q ss_pred -----CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 -----KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 -----~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++-||.+.++||++.
T Consensus 397 ~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 397 KRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp SCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 1346788888888888999999864
No 25
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=2.1e-29 Score=259.67 Aligned_cols=266 Identities=19% Similarity=0.221 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+++++||+++|+++++|| .|++|+..++.. .....+..++..+|+
T Consensus 79 ~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 158 (415)
T 1tqy_B 79 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 158 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCC
Confidence 478999999999999999999999 899998754321 024578899999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccc-cccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM-TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
++|+++|+++|+|++.||..|+++|++| +|++||+|+|.+ +...+ .+
T Consensus 159 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~----------------------~~------- 206 (415)
T 1tqy_B 159 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW----------------------VS------- 206 (415)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH----------------------HH-------
T ss_pred --CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH----------------------HH-------
Confidence 5799999999999999999999999999 999999999994 43110 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeee----ccCCCCCCCCHHHHhccCCCC
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS----VDDGIRPNTTIADLAKLKPAF 279 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~----~de~~r~~~t~e~l~~~~pvf 279 (461)
+. ..+ .++ +++ .++| |
T Consensus 207 -----------------~~------~~~------------------------~ls~~~~~~~------------~~~p-f 226 (415)
T 1tqy_B 207 -----------------QI------ASG------------------------RISTATDPDR------------AYLP-F 226 (415)
T ss_dssp -----------------HH------TTS------------------------CBCCCSCGGG------------SCCT-T
T ss_pred -----------------HH------hcc------------------------CccCCCCCCC------------CcCC-C
Confidence 00 000 011 122 3345 6
Q ss_pred CC--CCccccCCCCcccccceEEEEcchhHHHhcCC-CeeEEEEEeeeeccCCCCCCC--cHHHHHHHHHHHcCCCCCCc
Q 012522 280 KK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPSVMGI--GPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 280 ~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~-~~~a~i~g~~~~~~~p~~~~~--~~~~ai~~aL~~AGl~~~DI 354 (461)
+. +|++ ++|||+++||++.+.|+++|. +++++|.+++........... +...+++++|+++|++++||
T Consensus 227 d~~~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 227 DERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp STTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 54 4555 999999999999999999999 999999999887542221111 78899999999999999999
Q ss_pred cEEEecCCChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc------------------
Q 012522 355 NLFEINEAFAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR------------------ 412 (461)
Q Consensus 355 D~~eiheafa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~------------------ 412 (461)
|++|.|..++. .+...++.+ +...++.++..+..+|||.||+|+.+++.++++|+++
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~-~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~ 378 (415)
T 1tqy_B 300 DVVFADGAGVPELDAAEARAIGRV-FGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID 378 (415)
T ss_dssp CEEECCCCCSHHHHHHHHHHHHHH-HCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCE
T ss_pred CEEEEeCCCCcCcCHHHHHHHHHH-hCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999884 455555444 2222344445556689999999999999999999985
Q ss_pred -CC------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 -GK------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 -~~------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
++ +.+++++++++.||.+.++||++.+
T Consensus 379 ~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 379 LVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp ECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred ccCCCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 11 4578999988888889999998753
No 26
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.97 E-value=4.8e-30 Score=267.04 Aligned_cols=274 Identities=16% Similarity=0.221 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-C----eEEEEeecCCC-------------------------CccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPG-------------------------STRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~I-d----~vi~g~~~~~~-------------------------~~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+++++| | .|++|+..+.. ...+..+..++..+|
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 46799999999999999999999 7 68888764321 001335778999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... +.
T Consensus 182 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~----------------------~~------- 230 (451)
T 4ddo_A 182 F--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVS----------------------LG------- 230 (451)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH----------------------HH-------
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHH----------------------HH-------
Confidence 9 5799999999999999999999999999999999999999875100 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
.+. + .+.+.. ..+.+....++| |+.
T Consensus 231 ----------------~~~-~-----~~~ls~------------------------------~~~~~~~~~~~p-fd~~~ 257 (451)
T 4ddo_A 231 ----------------GFA-A-----ARALST------------------------------GFSEEPVRASRP-FDRDR 257 (451)
T ss_dssp ----------------HHH-H-----TTCBCC------------------------------SCTTSGGGSCCT-TBTTC
T ss_pred ----------------HHH-H-----Hhhhcc------------------------------CCCcCccccccc-cccCC
Confidence 000 0 000000 011112234556 543
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+|+||++.+.|++++.+|+++|.+++..... +...+.+...+++++|+++|++++|||+
T Consensus 258 ~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ 330 (451)
T 4ddo_A 258 DGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDY 330 (451)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 5666 899999999999999999999999999999887622 1112235678999999999999999999
Q ss_pred EEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------
Q 012522 357 FEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------- 413 (461)
Q Consensus 357 ~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------- 413 (461)
||+|.+++.. +...+ +.++. ..++++++.+..+|||.||+|+.++++++++|+++ +
T Consensus 331 ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 409 (451)
T 4ddo_A 331 VNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLD 409 (451)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSE
T ss_pred EEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccccc
Confidence 9999999862 23333 33444 34677788888899999999999999999999976 1
Q ss_pred --------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 414 --------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 414 --------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
.+.+++++++++.||.+.++||++..
T Consensus 410 ~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 410 LIGPAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp ECCSSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred ccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 03467889888888999999999764
No 27
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=8.3e-30 Score=263.45 Aligned_cols=274 Identities=19% Similarity=0.256 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------c-------------cchH-HH----HH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------T-------------RAME-CR----MA 118 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------~-------------~~~~-a~----~i 118 (461)
..+|+.+++++||+++|+++++|| .|++|+..+++. . .++. +. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 367999999999999999999999 699998765420 0 0111 33 88
Q ss_pred HHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHH
Q 012522 119 AFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198 (461)
Q Consensus 119 a~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (461)
+..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~-----------------------~~- 205 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI-----------------------VV- 205 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH-----------------------HH-
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH-----------------------HH-
Confidence 899999 5799999999999999999999999999999999999999654 10 00
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
..+. ..+.+.. +. .++|+ .+||
T Consensus 206 --------------------~~~~------~~~~ls~-------~~------------~~p~~------------~~rp- 227 (424)
T 1tqy_A 206 --------------------ACFD------AIRATTA-------RN------------DDPEH------------ASRP- 227 (424)
T ss_dssp --------------------HHHH------HTTCBCC-------CC------------SCGGG------------CCCT-
T ss_pred --------------------HHHH------hhccccC-------CC------------CCCCC------------CccC-
Confidence 0000 0111110 00 01122 3455
Q ss_pred CCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCC
Q 012522 279 FKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQI 351 (461)
Q Consensus 279 f~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~ 351 (461)
|+. +|++ ++|||+++||++.+.|+++|.+++++|.|++..... |...+.+...+++++|+++|+++
T Consensus 228 fd~~~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~ 300 (424)
T 1tqy_A 228 FDGTRDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA 300 (424)
T ss_dssp TBTTCCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred CCCCCCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 664 5666 999999999999999999999999999998876532 33444567899999999999999
Q ss_pred CCccEEEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------
Q 012522 352 DDINLFEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------- 414 (461)
Q Consensus 352 ~DID~~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------- 414 (461)
+|||++|.|++++.. +...+ +.++....++++++.+..+||+.+|+|+.++++++++|+++ +|
T Consensus 301 ~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~ 380 (424)
T 1tqy_A 301 TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPE 380 (424)
T ss_dssp GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTT
T ss_pred HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Confidence 999999999998863 33333 34444444677777777899999999999999999999987 21
Q ss_pred -------------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 -------------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 -------------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+.+++++++++.||.+.++||++.+
T Consensus 381 ~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 381 CDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp BCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 4578999988888888999998753
No 28
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.97 E-value=1.8e-29 Score=261.33 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGFP 125 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl~ 125 (461)
.+|+.+|+++||+++|+++++|| +|++|+..++.. .....+..++..+|+
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 172 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA- 172 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC-
Confidence 47999999999999999999999 588887755410 001367789999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 173 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-----------------------~~-------- 219 (430)
T 1ox0_A 173 -NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF-----------------------AI-------- 219 (430)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH-----------------------HH--------
T ss_pred -CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH-----------------------HH--------
Confidence 5799999999999999999999999999999999999998754 00 00
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
..+. ..+. ++.++.++. .++| ||. +|
T Consensus 220 -------------~~~~------~~~~------------------------ls~~~~p~~--------~~~p-Fd~~~~g 247 (430)
T 1ox0_A 220 -------------AGFQ------ALTA------------------------LSTTEDPTR--------ASIP-FDKDRNG 247 (430)
T ss_dssp -------------HHHH------HTTC------------------------BCCCSSTTS--------SSCT-TBTTCCS
T ss_pred -------------HHHH------hCCC------------------------ccCCCCCCC--------CCCC-CCCCCCC
Confidence 0000 0011 111111111 3455 654 45
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+++||++.+.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||+||
T Consensus 248 ~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve 320 (430)
T 1ox0_A 248 FV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVN 320 (430)
T ss_dssp BC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEE
T ss_pred cc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEE
Confidence 55 99999999999999999999999999999876542 3444456778999999999999999999999
Q ss_pred ecCCChHHHH-----HHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 359 INEAFASQYV-----YCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 359 iheafa~~~~-----~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
.|++++...- ...+.+|- ..+||..++. +|||.||+|+.++++++++|+++ ++
T Consensus 321 ~Hgtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~ 397 (430)
T 1ox0_A 321 AHGTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY 397 (430)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB
T ss_pred EeCCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC
Confidence 9999987531 12233343 3467777665 79999999999999999999987 11
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++++.||.+.++||++.
T Consensus 398 ~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 398 GQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 357889988877888899999864
No 29
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.97 E-value=8.7e-30 Score=263.71 Aligned_cols=273 Identities=19% Similarity=0.257 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl-~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+ ++++|| .|++|+..+... . ....+..++..+|
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 468999999999999999 999898 699998755310 0 1246788999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... ..+
T Consensus 168 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------------~~~------- 217 (431)
T 2ix4_A 168 F--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS---------------------VAG------- 217 (431)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHH-------
T ss_pred C--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH-------
Confidence 9 5799999999999999999999999999999999999999876110 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
+. ..+.+... . -.++++ .++| |+.
T Consensus 218 -----------------~~------~~~~ls~~------------~------~~~~~~------------~~~p-fd~~~ 243 (431)
T 2ix4_A 218 -----------------FS------RSRALSTK------------F------NSSPQE------------ASRP-FDCDR 243 (431)
T ss_dssp -----------------HH------HTTCBCCT------------T------TTCGGG------------SCCT-TBTTC
T ss_pred -----------------HH------hccccCcc------------c------cCCccc------------cccc-CCCCC
Confidence 00 00111000 0 001111 2345 543
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+
T Consensus 244 ~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (431)
T 2ix4_A 244 DGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDY 316 (431)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 5555 9999999999999999999999999999998765 334445567789999999999999999999
Q ss_pred EEecCCChHH----HHHHHHH-cCCC--CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----------------
Q 012522 357 FEINEAFASQ----YVYCIKK-LGLD--PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR----------------- 412 (461)
Q Consensus 357 ~eiheafa~~----~~~~~e~-LGl~--~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~----------------- 412 (461)
||.|..++.. +...+.. ++.. ..++++++++.++|||.||+|+.++++++++|+++
T Consensus 317 ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~ 396 (431)
T 2ix4_A 317 VNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDK 396 (431)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 9999877642 2222222 2211 24678888889999999999999999999999986
Q ss_pred --CC-------CCCEEEEEecccCcceeEEEEEE
Q 012522 413 --GK-------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 413 --~~-------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++ +.+++++++++.||.+.++||++
T Consensus 397 ~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 397 RFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp SSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 11 45788998887788888998875
No 30
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.97 E-value=3.3e-29 Score=257.98 Aligned_cols=269 Identities=17% Similarity=0.214 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl-~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+ ++++|| .+++|+..+... .....+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 788899 888887653200 01346788999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|+++||..|+++|++|++|++||+|+|.++..+..
T Consensus 157 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~------------------------------ 204 (412)
T 4ewg_A 157 L--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA------------------------------ 204 (412)
T ss_dssp C--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------------------
T ss_pred C--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH------------------------------
Confidence 9 57999999999999999999999999999999999999997762110
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
.+ .. .+.+. .. ..+++. .++| ||.
T Consensus 205 ----------------~~----~~--~~~l~-------~~------------~~~p~~------------~~rp-fd~~~ 230 (412)
T 4ewg_A 205 ----------------VF----DT--LYATS-------TR------------NDEPHL------------TPRP-FDAKR 230 (412)
T ss_dssp ----------------HH----HT--TTCBC-------CC------------TTCGGG------------CCCT-TBTTC
T ss_pred ----------------HH----HH--hhccc-------cC------------CCCCCC------------CCCC-CCCCC
Confidence 00 00 00000 00 001111 3455 654
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.+++....... ..+.+...+++++|+++|++++|||+||
T Consensus 231 ~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 303 (412)
T 4ewg_A 231 DGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVN 303 (412)
T ss_dssp CCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5666 89999999999999999999999999999988764221 1244677999999999999999999999
Q ss_pred ecCCChH----HHHHHHHHc-CCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--------------------C
Q 012522 359 INEAFAS----QYVYCIKKL-GLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------------------G 413 (461)
Q Consensus 359 iheafa~----~~~~~~e~L-Gl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------------~ 413 (461)
.|...+. .+...++.+ + .+++++..+..+|||.||+|+.+++.++++|+++ +
T Consensus 304 ~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v 380 (412)
T 4ewg_A 304 AHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYI 380 (412)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEEC
T ss_pred ccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccc
Confidence 9998886 333333332 2 2355555677789999999999999999999976 1
Q ss_pred C------CCCEEEEEecccCcceeEEEEEEc
Q 012522 414 K------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ~------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+ +.+++++++++.||.+.++||++.
T Consensus 381 ~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 381 RGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp CSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 1 346788888888888999999864
No 31
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.96 E-value=3.9e-28 Score=249.49 Aligned_cols=268 Identities=16% Similarity=0.183 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe-----EEEEeecCCC------------Cc--------------cchHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD-----IVVGTVLAPG------------ST--------------RAMECRMAAFYA 122 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~-----vi~g~~~~~~------------~~--------------~~~~a~~ia~~l 122 (461)
..+|+.+++++||+++|+++++||. |++|+..++. .. ....+..++..+
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 4689999999999999999998986 9999876542 00 124678899999
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHH
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV 202 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 202 (461)
|+ ++|+++|+++|+|++.||..|++.|++|++|++||+|+|.++.. +..
T Consensus 151 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~------------------------~~~----- 199 (406)
T 2vba_A 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE------------------------MAC----- 199 (406)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH------------------------HHH-----
T ss_pred cC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh------------------------HHH-----
Confidence 99 57999999999999999999999999999999999999998761 000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-
Q 012522 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK- 281 (461)
Q Consensus 203 ~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~- 281 (461)
. +. ..+.+..+ ++.+ ++ ..++| ||.
T Consensus 200 ----------------~-~~------~~~~ls~~------~~~~------------p~------------~~~~p-fd~~ 225 (406)
T 2vba_A 200 ----------------E-FD------AMGALSTK------YNDT------------PE------------KASRT-YDAH 225 (406)
T ss_dssp ----------------H-HH------HTTCBCCS------CTTS------------GG------------GSCCT-TBTT
T ss_pred ----------------H-Hh------hccccccc------cCCC------------Cc------------cccCc-CcCC
Confidence 0 00 01111000 0000 11 13455 664
Q ss_pred -CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 282 -~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.|++....... ..+.+...+++++|+++| +||||+
T Consensus 226 ~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~v 295 (406)
T 2vba_A 226 RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYL 295 (406)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEE
T ss_pred CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEE
Confidence 6666 89999999999999999999999999999988654211 114567899999999999 999999
Q ss_pred EecCCChHH----HHHH-HHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC--------------C----
Q 012522 358 EINEAFASQ----YVYC-IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG--------------K---- 414 (461)
Q Consensus 358 eiheafa~~----~~~~-~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~--------------~---- 414 (461)
|.|++++.. +... .+.+|... +++++.+..+|||.||+|+.++++++++|+++. +
T Consensus 296 e~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~ 373 (406)
T 2vba_A 296 NSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNI 373 (406)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEE
T ss_pred EeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCcccccc
Confidence 999999863 2222 23344332 444555566899999999999999999999871 1
Q ss_pred -------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++.+.||.+.++||++.
T Consensus 374 v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 374 VTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp CCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 346788888877888889998864
No 32
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.96 E-value=4.6e-28 Score=240.16 Aligned_cols=256 Identities=20% Similarity=0.163 Sum_probs=192.0
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
+|++.+ +....++.++.+|+.+|+++||+++|+++++||.|++++.++++. .+..+..++..+|++ .+|+++++++|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC 112 (313)
T 1zow_A 36 MTGIKE-RHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAAC 112 (313)
T ss_dssp HHCCSE-EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECGG
T ss_pred hhCceE-EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCcC
Confidence 566665 345567889999999999999999999999999999999887765 567889999999995 38999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|+++|++|.+|++|++|+|.++...
T Consensus 113 as~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------- 146 (313)
T 1zow_A 113 SGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT---------------------------------------------- 146 (313)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc----------------------------------------------
Confidence 9999999999999999999999999999987610
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDG 296 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DG 296 (461)
+| +++ ++++ ++||
T Consensus 147 ----------------------------------------------------------~~-~d~~~~~~-------~gdG 160 (313)
T 1zow_A 147 ----------------------------------------------------------DL-TDRSTAVL-------FGDG 160 (313)
T ss_dssp ----------------------------------------------------------CT-TCHHHHTT-------BCEE
T ss_pred ----------------------------------------------------------Cc-ccccceee-------eccc
Confidence 00 110 1223 8999
Q ss_pred ceEEEEcchhHHHhcCCCeeEE-EEEeeeecc---CCC-----CC-C--------CcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 297 AGAVLLMKRSLAVQKGLPILGV-FRSFSAVGV---DPS-----VM-G--------IGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 297 AaAvvL~s~~~A~~~g~~~~a~-i~g~~~~~~---~p~-----~~-~--------~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
|+|+||++.+.. ..+++. +.+.+.... .|. .+ + .....+++++|+++|++++|||+|+
T Consensus 161 a~A~vl~~~~~~----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~ 236 (313)
T 1zow_A 161 AGAVIIGEVSEG----RGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFI 236 (313)
T ss_dssp EEEEEEEECSTT----CEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred eEEEEEEecCCC----CceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999876531 223332 222221110 011 00 1 1345789999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 359 INEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+|+++........+.||++.+++..+ +..+||+.++++...+.+++++- +++.+++.++...++|....+++|+
T Consensus 237 ~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~--~~~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 237 PHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNG--KLKDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTT--CCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEchhhhheEEEEE
Confidence 99999998888899999998776543 56799999999998888876652 2335566666665444433455554
No 33
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.95 E-value=2e-27 Score=265.65 Aligned_cols=269 Identities=20% Similarity=0.259 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCCc-----------------cchHHHHHHHHcCCCCCCCeEE
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST-----------------RAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~~-----------------~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|+++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEEE
Confidence 4689999999999999999999995 999987766420 11467889999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||..|++.|++|++|++|++|+|.++.... ..+
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~---------------------~~~---------------- 215 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV---------------------FVD---------------- 215 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH---------------------HHH----------------
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999876100 000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+. ..+ .+++|.. ++| ||. +|++
T Consensus 216 --------~~------~~~------------------------~ls~~g~------------~~~-Fd~~adG~v----- 239 (915)
T 2qo3_A 216 --------FS------RQR------------------------ALAADGR------------SKA-FGAGADGFG----- 239 (915)
T ss_dssp --------HH------TTT------------------------CBCSSCC------------CCT-TBTTCCCBC-----
T ss_pred --------Hh------hhc------------------------ccCCCCC------------ccc-ccCCCCcee-----
Confidence 00 000 1222322 344 654 5666
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
+|||++++||++.+.|.+.|.+++++|.|++....... ..+.+...+++++|+++|++++|||+||.|++++.
T Consensus 240 --~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~ 317 (915)
T 2qo3_A 240 --FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTA 317 (915)
T ss_dssp --BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCT
T ss_pred --ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCc
Confidence 99999999999999999999999999999988653221 12235678999999999999999999999988764
Q ss_pred H----H-HHHHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------------
Q 012522 366 Q----Y-VYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------------- 414 (461)
Q Consensus 366 ~----~-~~~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------------- 414 (461)
. + ....+.++.. ..++|+++++.++||+.||+|+.++++++.+|+++ +|
T Consensus 318 ~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~ 397 (915)
T 2qo3_A 318 LGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALL 397 (915)
T ss_dssp TTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEEC
T ss_pred cCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeee
Confidence 2 2 2234566654 35799999999999999999999999999999986 10
Q ss_pred ----------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ----------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ----------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+.+++++++++-||.+.++||++..
T Consensus 398 ~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 398 AGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 2368888888778889999998764
No 34
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.95 E-value=3e-27 Score=264.35 Aligned_cols=268 Identities=21% Similarity=0.302 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCCc------------------cchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST------------------RAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~~------------------~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
.+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeEe
Confidence 578999999999999999999995 899988766431 01367789999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||.+|++.|++|++|++|++|+|.++..... .+
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~---------------------~~---------------- 237 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAF---------------------TE---------------- 237 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHH---------------------HH----------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhh---------------------Hh----------------
Confidence 99999999999999999999999999999999998761100 00
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+ ... -.+++|. .++| ||. ||++
T Consensus 238 --------~------~~~------------------------~~ls~~g------------~~~p-Fd~~adG~~----- 261 (917)
T 2hg4_A 238 --------F------RSQ------------------------GGLAADG------------RCKP-FSKAADGFG----- 261 (917)
T ss_dssp --------H------TTS------------------------SCBCTTS------------CCCT-TBTTCCCBC-----
T ss_pred --------h------hhc------------------------cCcCCcc------------ccCc-ccccccCCC-----
Confidence 0 000 0133333 3445 653 5555
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC-----CCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM-----GIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~-----~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
++||++++||++.+.|.+.|.+++++|.|++......... +.+...+++++|+++|++++|||++|.|++++.
T Consensus 262 --~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~ 339 (917)
T 2hg4_A 262 --LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTR 339 (917)
T ss_dssp --BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCT
T ss_pred --CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCc
Confidence 9999999999999999999999999999998876433221 234568999999999999999999999999985
Q ss_pred H----HHH-HHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------------
Q 012522 366 Q----YVY-CIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------------- 413 (461)
Q Consensus 366 ~----~~~-~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------------- 413 (461)
. +.. ..+.+|.. ..++|+++++..+||+.+|+|+..+++++++|+++ +
T Consensus 340 ~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~ 419 (917)
T 2hg4_A 340 LGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVV 419 (917)
T ss_dssp THHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEEC
T ss_pred cCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeec
Confidence 2 222 22334542 35789999999999999999999999999999976 0
Q ss_pred ------C---CCCEEEEEecccCcceeEEEEEEcc
Q 012522 414 ------K---DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 414 ------~---~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
| +.+++++++++-||.+.++||++..
T Consensus 420 ~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 420 SQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 1 2367888888778889999998754
No 35
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.95 E-value=1.2e-26 Score=231.09 Aligned_cols=245 Identities=20% Similarity=0.154 Sum_probs=188.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.+++.. .+..+..++..+|+ ++|+++++++|+|++.||..|++
T Consensus 46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~ 122 (322)
T 1ub7_A 46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 122 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHH
Confidence 4678999999999999999999999999999999887654 56688999999999 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++|++|+|.++...
T Consensus 123 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 144 (322)
T 1ub7_A 123 LVEAGLAQKVLAVGAEALSKII---------------------------------------------------------- 144 (322)
T ss_dssp HHHTTSCSEEEEEEEECGGGTS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEechhcccc----------------------------------------------------------
Confidence 9999999999999999987510
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
. | +|+ ++++ +||||+|+||++.+.
T Consensus 145 ----~------------------------------------------~-~d~~~~~~-------~GdGA~A~vL~~~~~- 169 (322)
T 1ub7_A 145 ----D------------------------------------------W-NDRATAVL-------FGDGGGAAVVGKVRE- 169 (322)
T ss_dssp ----C------------------------------------------T-TCHHHHTT-------BCCEEEEEEEECCCT-
T ss_pred ----C------------------------------------------h-hhccccee-------eccccEEEEEEecCC-
Confidence 0 0 110 1223 899999999987653
Q ss_pred HhcCCCeeEEEEE-eeeecc----------CCCC---------CC--------CcHHHHHHHHHHHcCCCCCCccEEEec
Q 012522 309 VQKGLPILGVFRS-FSAVGV----------DPSV---------MG--------IGPAVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 309 ~~~g~~~~a~i~g-~~~~~~----------~p~~---------~~--------~~~~~ai~~aL~~AGl~~~DID~~eih 360 (461)
+..+++.... .+.... .|.. .+ .....+++++|+++|++++|||+|+.|
T Consensus 170 ---~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 170 ---GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp ---TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred ---CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 1234443322 111100 0221 01 234678999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+........+.||++.+++..+ +..+||+.++++...+.+++++- +++.+++.++...+.|+...+++|+.
T Consensus 247 ~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g--~~~~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 247 QANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAG--RIREGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp CSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHT--SSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhC--CCCCCCEEEEEEEChhheeEEEEEEe
Confidence 999988888889999998877543 45799999999998887776542 23356677777766666666777764
No 36
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.95 E-value=1.7e-26 Score=228.46 Aligned_cols=241 Identities=17% Similarity=0.162 Sum_probs=183.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
.+..+|+.+|+++||+++|+++++||.|++++.+++.. .++.+..++..+|++. .|+++++++|+|++.||..|+++|
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i 125 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFI 125 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999887765 5678999999999953 699999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+|++|++|+|.++..
T Consensus 126 ~~g~~~~vlv~g~e~~s~~------------------------------------------------------------- 144 (309)
T 2ebd_A 126 KSGKAKNVLVIGAEKLSEA------------------------------------------------------------- 144 (309)
T ss_dssp HTTSCSEEEEEEEEEGGGT-------------------------------------------------------------
T ss_pred HCCCCCEEEEEEecccccc-------------------------------------------------------------
Confidence 9999999999999998761
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHh
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++ | .+. ++++ ++|||+|+||++.+.++
T Consensus 145 -~~------------~-------------------------------~~~~~~~~-------~gdGaaA~vL~~~~~~~- 172 (309)
T 2ebd_A 145 -VD------------W-------------------------------EDRSTCVL-------FGDGAGAVVVTRSEDKS- 172 (309)
T ss_dssp -CC------------T-------------------------------TCTTTTTT-------BCEEEEEEEEEECSSSC-
T ss_pred -cC------------c-------------------------------cchhhccc-------cccccEEEEEEecCCCC-
Confidence 00 0 000 1233 89999999999876431
Q ss_pred cCCCeeEEEEEeeeec----cCC-----CCCCC--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH
Q 012522 311 KGLPILGVFRSFSAVG----VDP-----SVMGI--------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK 373 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~----~~p-----~~~~~--------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~ 373 (461)
.+++...+..... ..| ...+. ....+++++|+++|++++|||+|++|+++........+.
T Consensus 173 ---~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~ 249 (309)
T 2ebd_A 173 ---DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEK 249 (309)
T ss_dssp ---EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHH
T ss_pred ---ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHH
Confidence 2333333322111 011 10111 345789999999999999999999999999888888899
Q ss_pred cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEE
Q 012522 374 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 374 LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~ 435 (461)
||++++++..+ +..+||+.++++...+.+++++ ++++.+++.++... |.|..+ +++|
T Consensus 250 lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~--g~~~~G~~~l~~~~-G~G~~~~~~~l 307 (309)
T 2ebd_A 250 LNIPKEKVFVN--IQKYGNTSAASIPIALHEAIKE--GKVKRGDLILMTAM-GGGLTWGAVLL 307 (309)
T ss_dssp TTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TCCCTTCEEEEEEE-ETTTEEEEEEE
T ss_pred hCCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE-chhhhhEEEEE
Confidence 99998776543 4679999999999999888765 23334555666554 445444 4444
No 37
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.95 E-value=1.8e-26 Score=230.82 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=182.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHH
Q 012522 68 GFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 68 ~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A 147 (461)
..++.+..+|+.+|+++||+++|+++++||.|++++.++++. .+..+..++..+|++ ++|+++++++|+|++.||..|
T Consensus 55 ~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A 132 (335)
T 1u6e_A 55 AADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAA 132 (335)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHH
Confidence 345789999999999999999999999999999999887765 577899999999995 589999999999999999999
Q ss_pred HHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Q 012522 148 ATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAA 227 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a 227 (461)
+++|++|.+|++||+|+|.++..
T Consensus 133 ~~~i~~g~~~~vLv~g~e~~s~~--------------------------------------------------------- 155 (335)
T 1u6e_A 133 ADMIRGGGAATMLVVGTEKLSPT--------------------------------------------------------- 155 (335)
T ss_dssp HHHHHHTSCSSEEEEEEEECGGG---------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEEEEcccccc---------------------------------------------------------
Confidence 99999999999999999998761
Q ss_pred hhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhH
Q 012522 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 307 (461)
Q Consensus 228 ~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~ 307 (461)
+ +| +++ .++..++|||+|+||++.+.
T Consensus 156 -----~------------------------------------------~~-~d~------~~~~~~gDGA~A~vl~~~~~ 181 (335)
T 1u6e_A 156 -----I------------------------------------------DM-YDR------GNCFIFADGAAAVVVGETPF 181 (335)
T ss_dssp -----C------------------------------------------CT-TCT------TTTTTBCEEEEEEEEEECSS
T ss_pred -----c------------------------------------------Cc-ccc------ccceEeccccEEEEEEecCC
Confidence 0 00 111 12233899999999987653
Q ss_pred HHhcCCCeeEEEEEe-eeec----c---------CCC------CC-C--------CcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 308 AVQKGLPILGVFRSF-SAVG----V---------DPS------VM-G--------IGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 308 A~~~g~~~~a~i~g~-~~~~----~---------~p~------~~-~--------~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
.+ ++..+.+. +... . .|. .+ + .....+++++|+++|++++|||+|+
T Consensus 182 ---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~ 256 (335)
T 1u6e_A 182 ---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFV 256 (335)
T ss_dssp ---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 12 22222221 1100 0 110 00 1 1335789999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 359 INEAFASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+|+++........+.||++++ ++..+ ...+||+.+++....+.+++.+- +++.++++++...++|+...+++|+.
T Consensus 257 ~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~--~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 257 PHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTG--AAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp ECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHT--SSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999999999999988 66544 35689999999654443333321 22345677776654444444555543
No 38
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.94 E-value=5.2e-26 Score=227.65 Aligned_cols=254 Identities=20% Similarity=0.190 Sum_probs=183.5
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
||++.+ +....++++..+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|
T Consensus 50 rtgi~~-r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C 127 (333)
T 4dfe_A 50 RTGIHA-RYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGAAFDVQAVC 127 (333)
T ss_dssp HHCCSE-EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCEEEEEECGG
T ss_pred hcCceE-EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCcEEEeCccc
Confidence 455554 234456889999999999999999999999999999999988776 678899999999997689999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|+++|++|.++++||+|+|.+|..
T Consensus 128 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~----------------------------------------------- 160 (333)
T 4dfe_A 128 SGFAYAVATADSFIRSGQHRTALVIGAETFSRI----------------------------------------------- 160 (333)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEeeccccc-----------------------------------------------
Confidence 999999999999999999999999999999871
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGA 297 (461)
++ .+ ++ .++..+||||
T Consensus 161 ---------------~~------------------------~~-------------------d~------~~~~lfGDGA 176 (333)
T 4dfe_A 161 ---------------LD------------------------FK-------------------DR------TTCVLFGDGA 176 (333)
T ss_dssp ---------------CC------------------------TT-------------------CT------TTTTTBCEEE
T ss_pred ---------------cC------------------------cc-------------------cc------cceeeecccc
Confidence 00 00 00 0122389999
Q ss_pred eEEEEcchhHHHhcCCCeeEEEEEeeeecc----CC-----------C--CC-C--------CcHHHHHHHHHHHcCCCC
Q 012522 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGV----DP-----------S--VM-G--------IGPAVAIPAAVKSAGLQI 351 (461)
Q Consensus 298 aAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----~p-----------~--~~-~--------~~~~~ai~~aL~~AGl~~ 351 (461)
+|+||.+.+. ..++........... .| . .+ + .....+++++|+++|+++
T Consensus 177 ~A~vl~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 251 (333)
T 4dfe_A 177 GAVILQASDE-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA 251 (333)
T ss_dssp EEEEEEEESS-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEEEEEcCC-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999987651 122222211111100 00 0 00 0 123467899999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcce
Q 012522 352 DDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMG 430 (461)
Q Consensus 352 ~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g 430 (461)
+|||+|.+|+++........+.||++++++..+ .--+||...++-...+.+++.+ +++ ++.++.++.+ |.|+.
T Consensus 252 ~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~t 325 (333)
T 4dfe_A 252 EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRD--GRIKRGQNVLIEGV--GGGFT 325 (333)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TCSCTTCEEEEEEE--ETTTE
T ss_pred HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--chhhe
Confidence 999999999999999999999999999987654 3457888888754444443332 122 2344444443 66666
Q ss_pred eEEEE
Q 012522 431 AAAVF 435 (461)
Q Consensus 431 ~A~v~ 435 (461)
++.++
T Consensus 326 ~~~~l 330 (333)
T 4dfe_A 326 WGASV 330 (333)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 54443
No 39
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.94 E-value=1e-24 Score=217.30 Aligned_cols=243 Identities=16% Similarity=0.145 Sum_probs=177.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHH
Q 012522 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (461)
Q Consensus 69 ~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~ 148 (461)
.+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 53 ~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~ 130 (323)
T 3il3_A 53 AEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVAD 130 (323)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHH
Confidence 35789999999999999999999999999999999988766 677899999999995 6899999999999999999999
Q ss_pred HHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Q 012522 149 TAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAAT 228 (461)
Q Consensus 149 ~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~ 228 (461)
++|++|.++++||+|+|.+|..
T Consensus 131 ~~i~~g~~~~vLvvg~e~~s~~---------------------------------------------------------- 152 (323)
T 3il3_A 131 QFIRAGKVKKALVIGSDLNSRK---------------------------------------------------------- 152 (323)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGS----------------------------------------------------------
T ss_pred HHHHCCCCCEEEEEEeeccccc----------------------------------------------------------
Confidence 9999999999999999999871
Q ss_pred hCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHH
Q 012522 229 ASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 229 ~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ .+ ++ ..+..+||||+|+||...+.
T Consensus 153 ----~~------------------------~~-------------------d~------~~~~lfGDGA~A~vl~~~~~- 178 (323)
T 3il3_A 153 ----LD------------------------ET-------------------DR------STVVLFGDGAGAVILEASEQ- 178 (323)
T ss_dssp ----CC------------------------TT-------------------CT------TTTTTBCEEEEEEEEEEESS-
T ss_pred ----cC------------------------cc-------------------cc------ccccccccceEEEEEEEcCC-
Confidence 00 00 00 01223799999999987641
Q ss_pred HhcCCCeeEEEEEeeeecc----CCC---------CC-CCc----------HHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 309 VQKGLPILGVFRSFSAVGV----DPS---------VM-GIG----------PAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~~----~p~---------~~-~~~----------~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
..++........... -|. .+ ..+ ...+++++|+++|++++|||+|.+|+++.
T Consensus 179 ----~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~ 254 (323)
T 3il3_A 179 ----EGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANL 254 (323)
T ss_dssp ----CCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCH
T ss_pred ----CCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 122222222111000 010 00 001 23578899999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeEEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
.......+.||++++++..+ .--+||...++-...+.+++.+ +++ +|.++.++.+ |.|+.++..+
T Consensus 255 ~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~t~~~~~ 320 (323)
T 3il3_A 255 RIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRD--GRIQRGQLLLLEAF--GGGWTWGSAL 320 (323)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TSSCTTCEEEEEEE--ETTTEEEEEE
T ss_pred HHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--ehhheeEEEE
Confidence 99999999999999987654 3457888888754444443332 122 2344444443 5565554433
No 40
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.93 E-value=4.5e-25 Score=219.08 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=182.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.+++.. .+..+..++..+|++ .+|+++++++|+|++.||..|++
T Consensus 47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~ 124 (317)
T 1hnj_A 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (317)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999888765 567899999999995 38999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++|++|+|.++...
T Consensus 125 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 146 (317)
T 1hnj_A 125 YVKSGAVKYALVVGSDVLARTC---------------------------------------------------------- 146 (317)
T ss_dssp HHHTTSCSEEEEEEEECHHHHS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999987510
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
+ | .++ ++++ +||||+|+||++.+.
T Consensus 147 ----~------------~-------------------------------~d~~~~~~-------~GdGA~A~vL~~~~~- 171 (317)
T 1hnj_A 147 ----D------------P-------------------------------TDRGTIII-------FGDGAGAAVLAASEE- 171 (317)
T ss_dssp ----C------------T-------------------------------TCHHHHTT-------BCCEEEEEEEEEESS-
T ss_pred ----C------------c-------------------------------hhccccee-------eccccEEEEEEecCC-
Confidence 0 0 000 1223 799999999987652
Q ss_pred HhcCCCeeEEEEEeeeec----cCCC-------------CCCC--------cHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012522 309 VQKGLPILGVFRSFSAVG----VDPS-------------VMGI--------GPAVAIPAAVKSAGLQIDDINLFEINEAF 363 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~----~~p~-------------~~~~--------~~~~ai~~aL~~AGl~~~DID~~eiheaf 363 (461)
..+++.+.+..... ..|. ..+. ....+++++|+++|++++|||+|+.|..+
T Consensus 172 ----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~ 247 (317)
T 1hnj_A 172 ----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQAN 247 (317)
T ss_dssp ----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSC
T ss_pred ----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 23555554422111 0111 0111 34578999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEE
Q 012522 364 ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 364 a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
........+.||++.+++..+ +-.+||..++++...+.+++.+- +.+.++..++... |.|+.++.++
T Consensus 248 ~~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~~L~~~~~~~--~~~~G~~vll~~~-G~G~t~~~~~ 314 (317)
T 1hnj_A 248 LRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDG--RIKPGQLVLLEAF-GGGFTWGSAL 314 (317)
T ss_dssp HHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTT--CSCTTCEEEEEEE-ETTTEEEEEE
T ss_pred HHHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHHHHHHHHHhC--CCCCCCEEEEEEE-chhheeEEEE
Confidence 998888889999998877432 45689999999887776665431 2223444455443 4555544433
No 41
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.93 E-value=6.6e-25 Score=246.39 Aligned_cols=264 Identities=23% Similarity=0.253 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------------ccchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------------~~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.+++++||+++|++++++| +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCeee
Confidence 56999999999999999999999 788887655431 023467889999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||.+|++.|++|++|++|++|+|.++.... ..+
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~---------------------~~~---------------- 201 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT---------------------SVQ---------------- 201 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH---------------------HHH----------------
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999886110 000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+.+ .+ .+++|. .++| ||. +|++
T Consensus 202 --------~~~------~~------------------------~ls~~g------------~~~~-Fd~~adG~~----- 225 (965)
T 3hhd_A 202 --------FLR------LG------------------------MLSPEG------------TCKA-FDTAGNGYC----- 225 (965)
T ss_dssp --------HHH------HT------------------------CBCTTC------------CCCT-TBTTCCSBC-----
T ss_pred --------HHh------cc------------------------CcCCCC------------cccc-chhccCCcc-----
Confidence 000 00 122232 2344 664 7887
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC------CCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~------~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
++||++++||++.+.|+ ++++.|.|++.+....... +.+...+++++|+++|++++||||||.|..++
T Consensus 226 --~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT 299 (965)
T 3hhd_A 226 --RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT 299 (965)
T ss_dssp --BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred --ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence 89999999999998875 4789999998876543322 23467899999999999999999999999988
Q ss_pred H----HHHHHH-HHcCCC-CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------C---------------
Q 012522 365 S----QYVYCI-KKLGLD-PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G--------K--------------- 414 (461)
Q Consensus 365 ~----~~~~~~-e~LGl~-~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~--------~--------------- 414 (461)
. .+...+ +.++-. ..++.+++-+..+||+.||+|+.+++.++.+|+.+ + |
T Consensus 300 ~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~ 379 (965)
T 3hhd_A 300 KVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVV 379 (965)
T ss_dssp TTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeec
Confidence 3 344333 333322 34567777778889999999999999999999986 1 1
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
..+++.+++++-||.+.++||+...
T Consensus 380 ~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 380 DQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 1124566777778889999998764
No 42
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=4.3e-25 Score=221.43 Aligned_cols=245 Identities=18% Similarity=0.099 Sum_probs=182.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.++++. .++.+..++..+|++ .+|+++++++|+|++.||..|++
T Consensus 56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999888765 567889999999995 38999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++||+|+|.++..
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~----------------------------------------------------------- 154 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDV----------------------------------------------------------- 154 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGG-----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEcccccc-----------------------------------------------------------
Confidence 999999999999999998751
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ . .++ ++++ +||||+|+||++.+.
T Consensus 155 ---~~------------------------~-------------------~d~~~~~~-------~GdGA~A~vL~~~~~- 180 (339)
T 1mzj_A 155 ---ID------------------------L-------------------ADRSLSFL-------FGDGAGAAVVGPSDV- 180 (339)
T ss_dssp ---SC------------------------S-------------------SCTTTTTT-------BCEEEEEEEEEEESS-
T ss_pred ---cC------------------------c-------------------cccccceE-------eccCceEEEEEecCC-
Confidence 00 0 011 2334 899999999987642
Q ss_pred HhcCCCeeEEEE-Eeeeec----cC---CCC-------------CC--------CcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 309 VQKGLPILGVFR-SFSAVG----VD---PSV-------------MG--------IGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 309 ~~~g~~~~a~i~-g~~~~~----~~---p~~-------------~~--------~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
..+++... +.+... .. |.. .+ .....+++++|+++|++++|||+|+.
T Consensus 181 ----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~ 256 (339)
T 1mzj_A 181 ----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVP 256 (339)
T ss_dssp ----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEE
T ss_pred ----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 12322222 211110 00 110 01 23457899999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+.+....-...+.||++.+ ++..+ .-.+||..++++...+.+++.+-+ ++.+++.++..++.|....+++|+.
T Consensus 257 H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~--~~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 257 HQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGA--VPGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp CCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTS--SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCC--CCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999888888899999988 76432 356899999998887776665422 2244555555544444344555543
No 43
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.93 E-value=3.2e-25 Score=223.90 Aligned_cols=277 Identities=16% Similarity=0.115 Sum_probs=172.8
Q ss_pred eeccccccCCCCCCCC--CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC
Q 012522 57 YRTAICKAKRGGFKDT--LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN 134 (461)
Q Consensus 57 ~~Tp~~r~~~G~~~~~--~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~ 134 (461)
.+|.+.+. .-...++ ++.+|+.+|+++||+++|++|++||.|++++++....+.+.++..++..+|++ ++++++++
T Consensus 36 ~~tGi~~r-~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~ 113 (357)
T 3s3l_A 36 KLRGIESV-TVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA 113 (357)
T ss_dssp HHHCCCEE-ECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE
T ss_pred HHcCceEE-EecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc
Confidence 44555442 2222344 89999999999999999999999999999998421111335788999999995 68999999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCC--EEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 135 RQCSSGLQAVADVATAIKAGLYD--IGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 135 ~~CaSgl~Al~~A~~~I~sG~~d--~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
.+|+|+++||..|+.+|++|.++ ++||+|+|.+|...
T Consensus 114 ~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------------------------------------- 152 (357)
T 3s3l_A 114 QRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------------------------------------- 152 (357)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT-----------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc-----------------------------------------
Confidence 99999999999999999999999 99999999998400
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCc
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQ 292 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~ 292 (461)
+.+ ++. .++..
T Consensus 153 --------------------~~~-------------------------------------------~~~------~~~~l 163 (357)
T 3s3l_A 153 --------------------IDR-------------------------------------------WNS------VDVTM 163 (357)
T ss_dssp --------------------CCT-------------------------------------------TTS------SSSCC
T ss_pred --------------------ccc-------------------------------------------ccc------cCCcc
Confidence 000 000 01223
Q ss_pred ccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc----------CCC-----CC---C----------------C---c
Q 012522 293 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV----------DPS-----VM---G----------------I---G 335 (461)
Q Consensus 293 ~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----------~p~-----~~---~----------------~---~ 335 (461)
+||||+|+||+..+.. ..++........... ++. .. + . .
T Consensus 164 fGDGA~A~vl~~~~~~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 239 (357)
T 3s3l_A 164 YGDGAAALVLSTRDGF----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDL 239 (357)
T ss_dssp BCCEEEEEEEESSCCS----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHH
T ss_pred cccccEEEEEecCCCC----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHH
Confidence 8999999999875420 112221121111100 000 00 0 0 1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEe-cCCChHHHHHHHHHcCCCCCCcCCCCCcc-cccCchhhHHHHHHHHHHHHHHccC
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEI-NEAFASQYVYCIKKLGLDPEKVNVNGGAV-ALGHPLGATGARCVATLLSEMKRRG 413 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~ei-heafa~~~~~~~e~LGl~~~~vn~~GG~~-~~Ghp~gatG~~~~~~~~~~L~~~~ 413 (461)
...+++++|+++|++++|||+|.+ |+++.. .....+.||++++++..+ .. .+||...++-...+.+++.+ +++
T Consensus 240 ~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~--g~l 314 (357)
T 3s3l_A 240 LVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN--ALV 314 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT--TCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc--CCC
Confidence 235788999999999999999996 999888 777889999999986531 01 24666666533333333221 123
Q ss_pred CCCCEEEEEecccCcceeEEEEEEccchhhhhcCCCCCccccc
Q 012522 414 KDCRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHL 456 (461)
Q Consensus 414 ~~~~~gl~~~~~g~G~g~A~v~~~~~~~~~~~~~~~~~~~~~~ 456 (461)
+.+...++.. .|.|+.++.++.+......|+. ...++|||-
T Consensus 315 ~~Gd~vll~~-fG~G~t~~a~ll~~~~~p~~~~-~~~~~~~~~ 355 (357)
T 3s3l_A 315 QPGDRVLLFG-GGAGYTCTAAVVEILRMPAQCM-RGSRSHHHH 355 (357)
T ss_dssp CTTCEEEEEC-CBTTTEEEEEEEEECCCC--------------
T ss_pred CCCCEEEEEE-EchhhhheeeeEEeccCCCCCC-CCccccccc
Confidence 3344445544 3556665444444434455555 566677663
No 44
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.93 E-value=3.1e-24 Score=216.48 Aligned_cols=247 Identities=16% Similarity=0.123 Sum_probs=181.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|+|++.||..|++
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 140 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN 140 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999988766 678899999999997679999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|...
T Consensus 141 ~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------------------- 162 (354)
T 4efi_A 141 LIQTGAAKRVLLAVGDTISKMI---------------------------------------------------------- 162 (354)
T ss_dssp HHHTTSCSEEEEEEEECGGGGC----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ ++ |+ ..+..+||||+|+||+..+..
T Consensus 163 ----~------------------------~~-------------------d~------~~~~lfGDGA~A~vl~~~~~~- 188 (354)
T 4efi_A 163 ----D------------------------PT-------------------DR------STSLLFGDAGTMTALETSNGD- 188 (354)
T ss_dssp ----C------------------------TT-------------------CH------HHHTTBCCEEEEEEEEECCSC-
T ss_pred ----C------------------------cc-------------------cc------ccccccccceeEEEEeecCCC-
Confidence 0 00 00 001127999999999875421
Q ss_pred hcCCCeeEEEEEeeeec----------cCCC--------------CCC-C----------cHHHHHHHHHHHcCCCCCCc
Q 012522 310 QKGLPILGVFRSFSAVG----------VDPS--------------VMG-I----------GPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~----------~~p~--------------~~~-~----------~~~~ai~~aL~~AGl~~~DI 354 (461)
..+.......... ..|. .+. . ....+++++|+++|++++||
T Consensus 189 ----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~di 264 (354)
T 4efi_A 189 ----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSY 264 (354)
T ss_dssp ----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1221111111100 0010 000 0 12357889999999999999
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EE
Q 012522 355 NLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AA 433 (461)
Q Consensus 355 D~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~ 433 (461)
|+|.+|+++........+.||++++++..+ .--+||...++-...+.+++.+-+-+ +|.++.++.+ |.|+.+ ++
T Consensus 265 d~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~-~Gd~vll~~f--G~G~t~~~~ 339 (354)
T 4efi_A 265 DAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKE-ETLQLGMFGF--GVGYSWASA 339 (354)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHH-SCEEEEEEEE--ETTTEEEEE
T ss_pred CEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCC-CCCEEEEEEE--chhhhheee
Confidence 999999999999999999999999987543 35689998888766666665542222 1334444443 556555 44
Q ss_pred EEEEc
Q 012522 434 VFERG 438 (461)
Q Consensus 434 v~~~~ 438 (461)
+|+-.
T Consensus 340 ll~~~ 344 (354)
T 4efi_A 340 ALAVG 344 (354)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 45443
No 45
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.92 E-value=1.1e-24 Score=217.74 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=179.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
.+..+|+.+|+++||+++|+ ++||.|++++.++++. .+..+..++..+|++ .+|+++++++|+|++.||..|+++|
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i 126 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLI 126 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHH
Confidence 67899999999999999999 8999999999887764 466788999999996 3899999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+|++||+|+|.++...
T Consensus 127 ~~g~~~~vLv~g~e~~s~~~------------------------------------------------------------ 146 (331)
T 2x3e_A 127 SAGLADSALLVGVDTFSHTL------------------------------------------------------------ 146 (331)
T ss_dssp HTTSCSEEEEEEEECGGGGS------------------------------------------------------------
T ss_pred HcCCCCEEEEEEeeccccCC------------------------------------------------------------
Confidence 99999999999999987510
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHh
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
+ .+ |+ ++++ +||||+|+||++.+.+
T Consensus 147 --~------------------------~~-------------------d~~~~~~-------~GdGA~A~vL~~~~~a-- 172 (331)
T 2x3e_A 147 --D------------------------PA-------------------DRSTRAL-------FGDGAGAVVLRAGDAE-- 172 (331)
T ss_dssp --C------------------------TT-------------------CHHHHHH-------BCCEEEEEEEEEECTT--
T ss_pred --C------------------------cc-------------------cccccee-------eccccEEEEEEecCCC--
Confidence 0 00 00 1223 7999999999876543
Q ss_pred cCCCeeEEEEEeeeeccC----CC-------------C---CC--------CcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 311 KGLPILGVFRSFSAVGVD----PS-------------V---MG--------IGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~----p~-------------~---~~--------~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
.+..+++..........+ |. . .+ .....+++++|+++|++++|||+|.+|+.
T Consensus 173 ~~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~ 252 (331)
T 2x3e_A 173 EEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQA 252 (331)
T ss_dssp STTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCC
T ss_pred CCCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 122343333221111000 10 0 01 23457899999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+........+.||++.+++..+ .-.+||+.+++....+.+++.+-+ .+.+++.++...++|....+++|+-
T Consensus 253 ~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~--~~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 253 NTRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGI--LRDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTC--SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCC--CCCCCEEEEEEEeHHhhheeeEEEE
Confidence 9998888999999998876543 356999999998877766654422 2245556665544444344555544
No 46
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.92 E-value=3.5e-25 Score=225.75 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=176.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVAT 149 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~ 149 (461)
+.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +++|+|++.||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-M-MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-C-SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 4466899999999999999999999999999998773 3 57788999999999655799999 9999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.++...
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------------------- 180 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCY---------------------------------------------------------- 180 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGC----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEeccchhc----------------------------------------------------------
Confidence 9999999999999999987610
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ | ++ .+.+.. + ++++ +||||+|+||++.+.
T Consensus 181 ----~------------~------------~d-----~~~~~~------~--~~~l-------fGDGA~A~vL~~~~~-- 210 (382)
T 1u0m_A 181 ----Q------------P------------TD-----LGVGSL------L--CNGL-------FGDGIAAAVVRGRGG-- 210 (382)
T ss_dssp ----C------------T------------TC-----CSHHHH------H--HHHH-------BCEEEEEEEEETTTC--
T ss_pred ----C------------c------------cc-----CCHHHh------h--ccch-------hcCCcEEEEEeccCC--
Confidence 0 0 00 000000 0 0223 799999999987642
Q ss_pred hcCCCeeEEEEEeeee----ccC----------------CCCC---CCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 012522 310 QKGLPILGVFRSFSAV----GVD----------------PSVM---GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ 366 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~----~~~----------------p~~~---~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~ 366 (461)
.+. +|.++... +.+ +..+ ..... +++++|+++|++++|||+|++|+++...
T Consensus 211 -~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i 284 (382)
T 1u0m_A 211 -TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRI 284 (382)
T ss_dssp -SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHH
T ss_pred -CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence 121 33332221 000 0001 12345 8999999999999999999999999998
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEEE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.....+.||+++++++++ --.-.+||+.+++....+.+++.+-+ ++.++..++..+ |.|+.+ +++|+.
T Consensus 285 ~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~--~~~Gd~vll~~~-G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 285 LDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGG--VEEGARGLLAGF-GPGITAEMSLGCW 354 (382)
T ss_dssp HHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCC--CCSSCCCEEEEE-ETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcC--CCCCCEEEEEEE-cccceeEEEEEEE
Confidence 888999999999987642 11345899998887766666655422 223344444333 555554 455554
No 47
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.92 E-value=4.6e-24 Score=215.52 Aligned_cols=248 Identities=18% Similarity=0.190 Sum_probs=180.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|++++++++.. .+..+..++..+|++ ++++++++.+|+|++.||..|+.
T Consensus 70 ~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~ 147 (359)
T 3h78_A 70 PEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARG 147 (359)
T ss_dssp TTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999988766 677899999999996 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|..-
T Consensus 148 ~i~sG~~~~vLvvg~e~~S~~~---------------------------------------------------------- 169 (359)
T 3h78_A 148 QILAGLARHVLVVCGEVLSKRM---------------------------------------------------------- 169 (359)
T ss_dssp HHHTTSCSEEEEEEEEECGGGC----------------------------------------------------------
T ss_pred HHHCCCcCEEEEEEEchhcccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ .++. .+.++..+||||+|+||+..+.
T Consensus 170 ----~------------------------~~d~-----------------------~~~t~~lfGDGAaA~vl~~~~~-- 196 (359)
T 3h78_A 170 ----D------------------------CSDR-----------------------GRNLSILLGDGAGAVVVSAGES-- 196 (359)
T ss_dssp ----C------------------------CSTT-----------------------THHHHTTBCEEEEEEEEECCSC--
T ss_pred ----C------------------------cccc-----------------------cccccceecceeEEEEEEecCC--
Confidence 0 0000 0001122799999999987642
Q ss_pred hcCCCeeEEEEEeeeec-----cC-------C--------C---CCC-C----------cHHHHHHHHHHHcCCCCCCcc
Q 012522 310 QKGLPILGVFRSFSAVG-----VD-------P--------S---VMG-I----------GPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----~~-------p--------~---~~~-~----------~~~~ai~~aL~~AGl~~~DID 355 (461)
.+..++.......... .+ + . .+. . ....+++++|+++|++++|||
T Consensus 197 -~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did 275 (359)
T 3h78_A 197 -LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDID 275 (359)
T ss_dssp -SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred -CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 0111222222211110 00 0 0 000 0 123578899999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAV 434 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v 434 (461)
+|.+|+++..+.....+.||++++++..+ .--+||...++-...+.+++.++ +. |.++.++.+ |.|+.+ +++
T Consensus 276 ~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~l-~~--Gd~vll~~f--G~G~t~~~~l 348 (359)
T 3h78_A 276 HVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPDI-QP--GQRVLVLTY--GSGATWGAAL 348 (359)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGGS-CT--TCEEEEEEE--ETTTEEEEEE
T ss_pred EEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHhC-CC--CCEEEEEEE--chhhhheeee
Confidence 99999999999999999999999987654 34579988888666665555552 12 444444443 566555 455
Q ss_pred EEEc
Q 012522 435 FERG 438 (461)
Q Consensus 435 ~~~~ 438 (461)
|+-.
T Consensus 349 l~~~ 352 (359)
T 3h78_A 349 YRKP 352 (359)
T ss_dssp EECC
T ss_pred EEeh
Confidence 5543
No 48
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.92 E-value=7e-25 Score=265.25 Aligned_cols=279 Identities=16% Similarity=0.194 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC--------eEEEEeecCCCCc-----------------------cchHHHHHH-HH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG--------DIVVGTVLAPGST-----------------------RAMECRMAA-FY 121 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id--------~vi~g~~~~~~~~-----------------------~~~~a~~ia-~~ 121 (461)
..+|+.+++++||+++|+++++|+ +|++|+..+.... ....+..++ ..
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 6888876432100 011333344 45
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHH-H
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITS-E 200 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a-~ 200 (461)
+|+ ++|+++|+++|+|++.||..|++.|++|++|++|++|+|.++..++. .+..|+..+ .
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~-----------------~f~~~~als~~ 2787 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAII-----------------GFGDMAATADT 2787 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------HHHHHTCBCCH
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHH-----------------HHHHhhhhhcc
Confidence 699 68999999999999999999999999999999999999998762210 000000000 0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
.++..++ .+++. .++| ||
T Consensus 2788 ~~~~~~~-------------------------------------------------~sp~~------------~crp-Fd 2805 (3089)
T 3zen_D 2788 EMMRAKG-------------------------------------------------ISDSK------------FSRA-ND 2805 (3089)
T ss_dssp HHHHHTT-------------------------------------------------CCTTT------------SCCS-SB
T ss_pred hhhhhcc-------------------------------------------------CCccc------------ccCc-cc
Confidence 0000000 01111 3455 65
Q ss_pred C--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC-------------CCcHHHHHHHHHH
Q 012522 281 K--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM-------------GIGPAVAIPAAVK 345 (461)
Q Consensus 281 ~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~-------------~~~~~~ai~~aL~ 345 (461)
. +|++ +||||+++||++.+.|.++|.++++.|.+...... ...+ ..+...+++++|+
T Consensus 2806 ~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~D-g~~~~~~aP~~g~~~a~~~~q~~ai~~AL~ 2877 (3089)
T 3zen_D 2806 RRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFAD-GVHTSIPAPGLGALGAARGGRESTLARSLA 2877 (3089)
T ss_dssp TTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC-CCCCCSSCCCCGGGGGSTTGGGSHHHHHHH
T ss_pred cCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecC-CcccCccCCchhHHhHhhhhHHHHHHHHHH
Confidence 4 7888 89999999999999999999999997766665432 1111 1133468999999
Q ss_pred HcCCCCCCccEEEecCCChH----HHH----HHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-
Q 012522 346 SAGLQIDDINLFEINEAFAS----QYV----YCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK- 414 (461)
Q Consensus 346 ~AGl~~~DID~~eiheafa~----~~~----~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~- 414 (461)
++|++++||||+|.|.+++. .+. ...+.+|... .++|+++++.++|||.||+|+.+++.++++|+.+ +|
T Consensus 2878 ~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPp 2957 (3089)
T 3zen_D 2878 QLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPP 2957 (3089)
T ss_dssp TTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCC
T ss_pred HcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCC
Confidence 99999999999999988775 222 2456778765 6799999999999999999999999999999976 10
Q ss_pred ------------------------------CCCEEEEEecccCcceeEEEEEEccch
Q 012522 415 ------------------------------DCRFGVISMCIGSGMGAAAVFERGDCV 441 (461)
Q Consensus 415 ------------------------------~~~~gl~~~~~g~G~g~A~v~~~~~~~ 441 (461)
+.+++++++.+-||.+.++||+..+..
T Consensus 2958 t~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2958 NRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp CTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred CCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 146788888888888999999987644
No 49
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.92 E-value=5.2e-24 Score=215.71 Aligned_cols=246 Identities=15% Similarity=0.113 Sum_probs=176.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|++|++||.|++++++++.. .+..++.++..+|++.++++++++.+|+|+++||..|++
T Consensus 76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~ 154 (365)
T 3gwa_A 76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKG 154 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHH
Confidence 5789999999999999999999999999999999988776 678899999999997679999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|...
T Consensus 155 ~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------------------- 176 (365)
T 3gwa_A 155 LVETGAARCVLLLTADTYSKYL---------------------------------------------------------- 176 (365)
T ss_dssp HHHTTSCSEEEEEEEECGGGGS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEchhhccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ +++ +..+..+||||+|+||+..+...
T Consensus 177 ----~------------------------~~d-------------------------r~~~~lfGDGAaA~vl~~~~~~~ 203 (365)
T 3gwa_A 177 ----H------------------------PLD-------------------------KSVRTLFGDGASATAVIAEHGEL 203 (365)
T ss_dssp ----C------------------------TTC-------------------------HHHHTTBCCEEEEEEEEEECSSS
T ss_pred ----C------------------------ccc-------------------------ccccccccceeEEEEEEecCCCC
Confidence 0 000 00111279999999998764210
Q ss_pred hcCCCeeEEEEEeeeec-----------cCCC-------------------CC---C--------CcHHHHHHHHHHHcC
Q 012522 310 QKGLPILGVFRSFSAVG-----------VDPS-------------------VM---G--------IGPAVAIPAAVKSAG 348 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----------~~p~-------------------~~---~--------~~~~~ai~~aL~~AG 348 (461)
. .++.......... ..|. .+ + .....+++++|+++|
T Consensus 204 -~--~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~g 280 (365)
T 3gwa_A 204 -E--RIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAG 280 (365)
T ss_dssp -C--SEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -C--ceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 1222222211110 0010 00 0 011357889999999
Q ss_pred CCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCc
Q 012522 349 LQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSG 428 (461)
Q Consensus 349 l~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G 428 (461)
++++|||+|.+|+++........+.||++++++..+ .--+||..+++-...+.+++.+ ++++.+...+... .|.|
T Consensus 281 l~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~--g~~~~Gd~vll~~-fG~G 355 (365)
T 3gwa_A 281 EPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRAN--GTLARGMRLMLLG-FGVG 355 (365)
T ss_dssp CCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHT--TCCCTTCEEEEEE-EETT
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHc--CCCCCCCEEEEEE-Eehh
Confidence 999999999999999999999999999999987644 3457888877744333333322 1122344444443 3666
Q ss_pred ceeEEEE
Q 012522 429 MGAAAVF 435 (461)
Q Consensus 429 ~g~A~v~ 435 (461)
+.++.++
T Consensus 356 ~t~~~~l 362 (365)
T 3gwa_A 356 YSWAGCL 362 (365)
T ss_dssp TEEEEEE
T ss_pred heeEEEE
Confidence 6654443
No 50
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.92 E-value=1.2e-23 Score=211.54 Aligned_cols=262 Identities=17% Similarity=0.147 Sum_probs=180.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|+|++.||..|++
T Consensus 64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 142 (345)
T 3s21_A 64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAAR 142 (345)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999888766 677899999999997678999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|... . .. ..+
T Consensus 143 ~i~~g~~~~vLvvg~e~~s~~~-~-----------------------~~----------------------~~~------ 170 (345)
T 3s21_A 143 MLERGEIDYALVVDGETANLVY-E-----------------------KT----------------------LER------ 170 (345)
T ss_dssp HHHHTSCSEEEEEEEECCHHHH-H-----------------------HH----------------------HHH------
T ss_pred HHHCCCCCEEEEEEEcccchhh-c-----------------------cc----------------------ccc------
Confidence 9999999999999999998610 0 00 000
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCCCcccccceEEEEcchhH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSL 307 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~ 307 (461)
++. |+ .+.+ + |+. .+.+ +||||+|+||.+.+.
T Consensus 171 --~~~-------------------------~~-----~~~~------~-f~~~~~~~~-------~GdGA~A~vl~~~~~ 204 (345)
T 3s21_A 171 --MTS-------------------------PD-----VTEE------E-FRNELAALT-------LGCGAAAMVMARSEL 204 (345)
T ss_dssp --HTC-------------------------TT-----CCHH------H-HHHHHGGGG-------BCCEEEEEEEEEGGG
T ss_pred --ccC-------------------------Cc-----cchh------h-hhhhcccee-------eccceeEEEEecCCC
Confidence 000 00 0000 0 110 1223 899999999998653
Q ss_pred HHhcCCCeeEEEEEeeeeccC---C--C--CC-CC--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH
Q 012522 308 AVQKGLPILGVFRSFSAVGVD---P--S--VM-GI--------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371 (461)
Q Consensus 308 A~~~g~~~~a~i~g~~~~~~~---p--~--~~-~~--------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~ 371 (461)
.. -+..++...........+ + . .+ +. ....+++++|+++|++++|||+|.+|+++........
T Consensus 205 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~ 283 (345)
T 3s21_A 205 VP-DAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFV 283 (345)
T ss_dssp ST-TSCEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHH
T ss_pred CC-CCcceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHH
Confidence 21 011122111111110000 0 0 00 10 1235678999999999999999999999999999999
Q ss_pred HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 372 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 372 e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+.||++++++..+ .--+||...++-...+.+++.+- +++.++..+... .|.|+.++.++-
T Consensus 284 ~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g--~~~~Gd~vll~~-~G~G~t~~~~~l 343 (345)
T 3s21_A 284 KSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELG--RLKKGDRIALLG-IGSGLNCSMAEV 343 (345)
T ss_dssp HHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHT--CCCTTCEEEEEE-EETTTEEEEEEE
T ss_pred HHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcC--CCCCCCEEEEEE-EChhhhheEEEE
Confidence 9999999886533 24579988888666665555441 122334444433 266666544443
No 51
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.91 E-value=1.3e-24 Score=220.80 Aligned_cols=247 Identities=13% Similarity=0.117 Sum_probs=172.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..+++++++ ++|+|++.||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999987643 467889999999996557999996 8999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.++++||+|+|.++.....
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~~--------------------------------------------------------- 193 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFSN--------------------------------------------------------- 193 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEEecchhhcC---------------------------------------------------------
Confidence 99999999999999998861100
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
| .+.+.+ + .+++ +||||+|+||++.+.+..
T Consensus 194 ----------------~-------------------~dr~~~------~--~~~l-------fGDGA~A~vL~~~~~~~~ 223 (374)
T 2h84_A 194 ----------------T-------------------DGGDQM------V--ASSI-------FADGSAAYIIGCNPRIEE 223 (374)
T ss_dssp ----------------S-------------------SSHHHH------H--HHHH-------BCCEEEEEEEESSCCTTC
T ss_pred ----------------C-------------------CCHHHH------h--hhhh-------hccCcEEEEEecCCCccc
Confidence 0 000000 0 0123 799999999998765432
Q ss_pred cCCCeeEEEEEeeeecc-----------CCCC----CC--------CcHHHHHHHHHHHcC------CCCCCccEEEecC
Q 012522 311 KGLPILGVFRSFSAVGV-----------DPSV----MG--------IGPAVAIPAAVKSAG------LQIDDINLFEINE 361 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~-----------~p~~----~~--------~~~~~ai~~aL~~AG------l~~~DID~~eihe 361 (461)
.+ ++ ++.+.+.... ...- .+ .....+++++|+++| ++++|||+| +|+
T Consensus 224 ~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~ 299 (374)
T 2h84_A 224 TP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHT 299 (374)
T ss_dssp CC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECC
T ss_pred CC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECC
Confidence 22 22 4554433210 0000 00 123568899999999 999999999 999
Q ss_pred CChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHcc-CCCCCEEEEEecccCcceeEEEEEE
Q 012522 362 AFASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRR-GKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 362 afa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++........+.||++++++.++ --.-.+||+..++-.. ++.++.++ .++.++.++. .|+|+.++.++-+
T Consensus 300 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~----~L~~~~~~~~~Gd~vll~~--~G~G~t~~~~ll~ 371 (374)
T 2h84_A 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIF----VMDHARKSKSLPTYSISLA--FGPGLAFEGCFLK 371 (374)
T ss_dssp CCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHH----HHHHHHTCSCCCSEEEEEE--EETTTEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH----HHHHHHhhcCCCCeEEEEE--eccchhhhhhhhe
Confidence 99998888999999999987532 1123466666666444 44444333 1233444443 3666666544433
No 52
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.91 E-value=6.1e-23 Score=206.67 Aligned_cols=247 Identities=20% Similarity=0.222 Sum_probs=176.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHH
Q 012522 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (461)
Q Consensus 69 ~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~ 148 (461)
.++++..+|+.+|+++||+++|++|+|||.||++++++++. .|..+.+++..||++ +.++++++.+|++++.||..|.
T Consensus 57 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~ 134 (350)
T 4ewp_A 57 TAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQAD 134 (350)
T ss_dssp CSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhh
Confidence 35789999999999999999999999999999999999876 688899999999996 5789999999999999999999
Q ss_pred HHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Q 012522 149 TAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAAT 228 (461)
Q Consensus 149 ~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~ 228 (461)
.+|++|..+.+||+++|.+|...
T Consensus 135 ~~i~~g~~~~~Lvv~~E~~s~~~--------------------------------------------------------- 157 (350)
T 4ewp_A 135 ALVRSGTARHVLVVGVERLSDVV--------------------------------------------------------- 157 (350)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGGC---------------------------------------------------------
T ss_pred hhhhCCCccceeEeeeeeceecc---------------------------------------------------------
Confidence 99999999999999999988610
Q ss_pred hCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHH
Q 012522 229 ASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 229 ~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
+ + .++ ..+..+||||+|+||...+..
T Consensus 158 -----d------------~-------------------------------~~~------~~~~lfgDGA~A~vl~~~~~~ 183 (350)
T 4ewp_A 158 -----D------------P-------------------------------TDR------SISFLLGDGAGAVIVAASDEP 183 (350)
T ss_dssp -----C------------T-------------------------------TCT------TTGGGBCEEEEEEEEEEESSC
T ss_pred -----c------------c-------------------------------ccc------ccccccccchheeeeecccCC
Confidence 0 0 000 001127999999999865421
Q ss_pred HhcCCCeeEEEEEeeeec-----------------------cCCC------------C-C-C--------CcHHHHHHHH
Q 012522 309 VQKGLPILGVFRSFSAVG-----------------------VDPS------------V-M-G--------IGPAVAIPAA 343 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~-----------------------~~p~------------~-~-~--------~~~~~ai~~a 343 (461)
+... ...+..... .+.. . + + .....+++++
T Consensus 184 ---~~~~--~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~ 258 (350)
T 4ewp_A 184 ---GISP--SVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREA 258 (350)
T ss_dssp ---CBCC--CEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHH
T ss_pred ---Cccc--eeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHH
Confidence 1111 111111000 0000 0 0 0 0124688999
Q ss_pred HHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 344 VKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 344 L~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
|+++|++++|||+|.+|+++..+.....+.||++++++-+. -.--+||...+|=...+.+++.+-+- .+|.++.++.+
T Consensus 259 L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g~~-~~Gd~vll~~f 336 (350)
T 4ewp_A 259 LDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEENPE-LSGGLALQIGF 336 (350)
T ss_dssp HHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHCGG-GTTSEEEEEEE
T ss_pred HHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhCCC-CCcCEEEEEEE
Confidence 99999999999999999999999999999999999885331 12346888877755444444443221 22344444443
Q ss_pred cccCcceeEEEEEE
Q 012522 424 CIGSGMGAAAVFER 437 (461)
Q Consensus 424 ~~g~G~g~A~v~~~ 437 (461)
|.|+.++.++-|
T Consensus 337 --G~G~t~~~~vlr 348 (350)
T 4ewp_A 337 --GAGLVYGAQVVR 348 (350)
T ss_dssp --ETTTEEEEEEEE
T ss_pred --chhhEeEEEEEE
Confidence 667766554444
No 53
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.91 E-value=2.6e-24 Score=220.05 Aligned_cols=252 Identities=18% Similarity=0.194 Sum_probs=175.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +.+|+|++.||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF-I-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998873 3 57788999999999655678888 99999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+|++||+|+|.++... + |+.+|
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~-~--------------------------------~~~~r-------------------- 215 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNA-V--------------------------------FADDI-------------------- 215 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGC-C--------------------------------CCSSH--------------------
T ss_pred HHcCCCCEEEEEEEEeccccC-C--------------------------------CCCCH--------------------
Confidence 999999999999999988610 0 00000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++.. .+++ +||||+|+||++.+.+..
T Consensus 216 ---------------------------------------~~~~--------~~~l-------fGDGA~A~vL~~~~~~~~ 241 (393)
T 1ted_A 216 ---------------------------------------NDVV--------IHSL-------FGDGCAALVIGASQVQEK 241 (393)
T ss_dssp ---------------------------------------HHHH--------HHHH-------BCEEEEEEEEEEECTTSC
T ss_pred ---------------------------------------HHhh--------hhhh-------hcCccEEEEEecCCCccc
Confidence 0000 0123 799999999987654311
Q ss_pred cCCCeeEEEEEeeeec-cCC-C------------C-CC--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 311 KGLPILGVFRSFSAVG-VDP-S------------V-MG--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~-~~p-~------------~-~~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
.+. .+.++.+++... .+. . . .+ .....+++++|+++|++++|||+|.+|+++..+.
T Consensus 242 ~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~ 320 (393)
T 1ted_A 242 LEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 320 (393)
T ss_dssp CCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHH
Confidence 122 334566653321 110 0 0 11 1234688999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeE-EEEE
Q 012522 368 VYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAA-AVFE 436 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A-~v~~ 436 (461)
....+.||++++++.++ --.--+||+.+++-...+.+++.+- +. +.++..++.. .|+|+.++ ++|+
T Consensus 321 d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g--~~~~~Gd~vll~~-~G~G~t~~~~~l~ 389 (393)
T 1ted_A 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQA--ESAKAISTGVAFA-FGPGVTVEGMLFD 389 (393)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSC--SSSSSSEEEEEEE-EETTTEEEEEEEE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcC--ccCCCCCeEEEEE-eccchhhhhhhee
Confidence 88999999999987431 1123478877777554444443321 12 1234444443 35555554 4444
No 54
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.90 E-value=1.2e-22 Score=207.32 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=169.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|+ ++++++++.+|+|+++||..|+++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999988776 67789999999999 47999999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|.++++||+|+|.+|...
T Consensus 193 ~g~~~~vLvvg~E~~S~~~------------------------------------------------------------- 211 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHL------------------------------------------------------------- 211 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGC-------------------------------------------------------------
T ss_pred CCCCCEEEEEeehhcCCcC-------------------------------------------------------------
Confidence 9999999999999998710
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
+ . .|+ ..+..+||||+|+||...+... -+
T Consensus 212 -d------------------------~-------------------~dr------~t~~lFGDGA~A~vl~~~~~~~-~~ 240 (392)
T 3led_A 212 -N------------------------F-------------------RDR------DSHFIFGDVATAAIVERADDAQ-GG 240 (392)
T ss_dssp -C------------------------T-------------------TCT------TTTTTBCEEEEEEEEEEGGGCC-SS
T ss_pred -C------------------------c-------------------Ccc------cCCcccccccEEEEEEecCCCC-CC
Confidence 0 0 000 0122389999999998765310 01
Q ss_pred CCeeEEEEEeeee-------c-c---CCCC-------C-CCc----------HHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012522 313 LPILGVFRSFSAV-------G-V---DPSV-------M-GIG----------PAVAIPAAVKSAGLQIDDINLFEINEAF 363 (461)
Q Consensus 313 ~~~~a~i~g~~~~-------~-~---~p~~-------~-~~~----------~~~ai~~aL~~AGl~~~DID~~eiheaf 363 (461)
..++......... + . .+.. + ..+ ...+++++|+++|++++|||+|.+|+++
T Consensus 241 ~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan 320 (392)
T 3led_A 241 WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQAN 320 (392)
T ss_dssp EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSC
T ss_pred CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCC
Confidence 1122111111000 0 0 0000 0 011 2357889999999999999999999999
Q ss_pred hHHHHHHHHHc-CC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEE
Q 012522 364 ASQYVYCIKKL-GL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 364 a~~~~~~~e~L-Gl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
..+.....+.| |+ +.+++..+ .--+||...||-. -++.++.++++.+...++... |+|+.+ +++|+
T Consensus 321 ~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsip----l~L~~~~~~~~~Gd~vll~gf-G~G~t~~~~ll~ 390 (392)
T 3led_A 321 INMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSI----IAFHKHQDDMAQGDLGLICSF-GAGYSAGTVFVQ 390 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHH----HHHHHCCTTCCTTCEEEEEEE-ETTTEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHH----HHHHHHhCCCCCCCEEEEEEE-ChhhEeEEEEEE
Confidence 99888888886 64 55665332 3457888777643 334444444434455555443 556665 44444
No 55
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.89 E-value=1.4e-22 Score=206.70 Aligned_cols=250 Identities=17% Similarity=0.130 Sum_probs=166.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++...+ +++++.+|+++++||..|..+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999887 44 6788999999999975443 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.++.+||+|+|.+|..
T Consensus 173 ~sg~~~~vLvvg~E~~s~~------------------------------------------------------------- 191 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMY------------------------------------------------------------- 191 (387)
T ss_dssp HSSTTCEEEEEEEECGGGT-------------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchh-------------------------------------------------------------
Confidence 9999999999999999840
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|.+ | ++ .+.+++ ..+..+||||+|+||+..+. .
T Consensus 192 -~~~-----------~------------~d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~--~- 224 (387)
T 3oit_A 192 -FTG-----------P------------DE-----GCFRTL---------------LVQGLFGDGAAAVIVGADAD--D- 224 (387)
T ss_dssp -CCC-----------C------------CS-----SSCHHH---------------HHHHHBCCEEEEEEEESSCC--S-
T ss_pred -ccC-----------c------------cc-----cchHhh---------------hcccccccceEEEEEecCCC--c-
Confidence 000 0 00 000110 01222799999999987641 1
Q ss_pred CCCeeEEEEEeeeeccC--CC-------C------CCC--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCC
Q 012522 312 GLPILGVFRSFSAVGVD--PS-------V------MGI--------GPAVAIPAAVKSA----GLQIDDIN--LFEINEA 362 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~--p~-------~------~~~--------~~~~ai~~aL~~A----Gl~~~DID--~~eihea 362 (461)
...+...+.+......+ .. . +.. ....+++++|+++ |++ |+| +|.+|++
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~ 302 (387)
T 3oit_A 225 VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPG 302 (387)
T ss_dssp SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCC
T ss_pred ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCC
Confidence 11222244433221100 00 0 001 1235678888888 987 555 9999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-----CCEEEEEecccCccee-EEEE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-----CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-----~~~gl~~~~~g~G~g~-A~v~ 435 (461)
+..+.....+.|||+++++..+ --.--+||...+|-...+.++..+ +- .+| ...+++.. .|.|+.+ +++|
T Consensus 303 n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~-~~G~~g~~~d~vll~~-fG~G~t~~~~ll 379 (387)
T 3oit_A 303 SSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RK-EAAAAGEWPELGVMMA-FGPGMTVDAMLL 379 (387)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC------------CCEEEEEE-EETTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hh-ccCCCCCCCCEEEEEE-ecccceeeeeee
Confidence 9999999999999999986421 001347888888765555554333 10 112 14555554 3666665 4555
Q ss_pred EE
Q 012522 436 ER 437 (461)
Q Consensus 436 ~~ 437 (461)
++
T Consensus 380 ~~ 381 (387)
T 3oit_A 380 HA 381 (387)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 56
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.89 E-value=5.9e-22 Score=197.19 Aligned_cols=94 Identities=23% Similarity=0.240 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA 153 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~s 153 (461)
+.+|+.+|+++||+++|+++++||.|++++++++.. .+..+..++..+|++. +++++++.+|+|+++||..|+.+|++
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGATE-AFAFDISAACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCTT-CEEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCCC-ceEEEeCcccHHHHHHHHHHHHHHHC
Confidence 899999999999999999999999999999987776 6788999999999964 89999999999999999999999999
Q ss_pred CCCCEEEEEeeccccc
Q 012522 154 GLYDIGIAAGLESMTV 169 (461)
Q Consensus 154 G~~d~vLv~G~E~~s~ 169 (461)
|.++++|++|+|.+|.
T Consensus 130 g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 130 GRYQTGLVIGGETFSK 145 (321)
T ss_dssp SSCCCEEEEEEECGGG
T ss_pred CCCCEEEEEEEccccc
Confidence 9999999999999986
No 57
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.89 E-value=6.7e-22 Score=229.38 Aligned_cols=278 Identities=19% Similarity=0.217 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCC-----------------------ccchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS-----------------------TRAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~-----------------------~~~~~a~~ia~-~ 121 (461)
..|+.+++.+||+++|++ |.+ |+ ++++|+..+... -....+.+++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 568899999999999994 766 44 566676543310 01224567776 4
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++...+. .+
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~-----------------~f--------- 1343 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-----------------EF--------- 1343 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------HH---------
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-----------------HH---------
Confidence 888 68999999999999999999999999999999999999998652110 00
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
...+..-+..++++ .| .++++ .+|| |+.
T Consensus 1344 --~~m~als~~~~e~~------------~g-------------------------~~p~~------------~~RP-fd~ 1371 (1887)
T 2uv8_A 1344 --GNMKATSNTLEEFE------------HG-------------------------RTPAE------------MSRP-ATT 1371 (1887)
T ss_dssp --HHTTCBCCHHHHHH------------TT-------------------------CCGGG------------SCCT-TBT
T ss_pred --HHhhhhccchhhhc------------cc-------------------------CCCcc------------CcCC-Ccc
Confidence 00010000000000 00 11222 3455 664
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC------CC-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GI------------------- 334 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~------~~------------------- 334 (461)
+|++ ++||++++||++.+.|.++|.++++.|.+++.+....... +.
T Consensus 1372 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld 1444 (1887)
T 2uv8_A 1372 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1444 (1887)
T ss_dssp TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGC
T ss_pred cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccc
Confidence 7888 8999999999999999999999999999998876422110 00
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012522 335 ------------------------------------------------------------------------GPAVAIPA 342 (461)
Q Consensus 335 ------------------------------------------------------------------------~~~~ai~~ 342 (461)
+...++++
T Consensus 1445 ~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ 1524 (1887)
T 2uv8_A 1445 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1524 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHH
Confidence 00258999
Q ss_pred HHHHcCCCCCCccEEEecCCChHH----HHH----HHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-
Q 012522 343 AVKSAGLQIDDINLFEINEAFASQ----YVY----CIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR- 412 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~~----~~~----~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~- 412 (461)
+|+++||+++|||++|.|..++.. +.. ....++-.. .++.++.-+..+|||.||+|+.+++.++.+|+.+
T Consensus 1525 ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~ 1604 (1887)
T 2uv8_A 1525 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGI 1604 (1887)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCC
Confidence 999999999999999999998832 111 112334432 2344444455679999999999999999999976
Q ss_pred -------------C---------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 -------------G---------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 -------------~---------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ .+.+++++++++-||.+..+|++..+
T Consensus 1605 iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1605 IPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp ECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred cCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 0 13467888887777788888888654
No 58
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.88 E-value=1.7e-21 Score=199.97 Aligned_cols=252 Identities=13% Similarity=0.064 Sum_probs=179.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++...+ +++++.+|+|++.||..|+++
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV-D-MPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDL 190 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 3 5778999999999965455 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.++++||+|+|.++..-..
T Consensus 191 i~~g~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 213 (406)
T 2d3m_A 191 AENNRGARVLVVCAELTIMMLRA--------------------------------------------------------- 213 (406)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEEecchheeC---------------------------------------------------------
Confidence 99999999999999998761000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++| .+.++. ..+..+||||+|+||++.+..
T Consensus 214 ----------------------------~~d-----~~~~~~---------------~~~~lfGDGAaA~vL~~~~~~-- 243 (406)
T 2d3m_A 214 ----------------------------PNE-----THLDNA---------------IGISLFGDGAAALIIGSDPII-- 243 (406)
T ss_dssp ----------------------------CCS-----TTHHHH---------------HHHTTBCCEEEEEEEESSCCT--
T ss_pred ----------------------------Ccc-----cchhhh---------------hccceeccceEEEEEecCCCC--
Confidence 000 000000 011127999999999876431
Q ss_pred cC-CCeeEEEEEeeeeccCC--C-------------CCC--------CcHHHHHHHHHHHcCCCCCCccE----EEecCC
Q 012522 311 KG-LPILGVFRSFSAVGVDP--S-------------VMG--------IGPAVAIPAAVKSAGLQIDDINL----FEINEA 362 (461)
Q Consensus 311 ~g-~~~~a~i~g~~~~~~~p--~-------------~~~--------~~~~~ai~~aL~~AGl~~~DID~----~eihea 362 (461)
+ ..+..++.+.+....+. . .++ .....+++++|+++|++++ ||+ |.+|++
T Consensus 244 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~ 321 (406)
T 2d3m_A 244 -GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG 321 (406)
T ss_dssp -TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS
T ss_pred -ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC
Confidence 2 11122444443321100 0 001 1234688999999999999 999 999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AA 433 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~ 433 (461)
+........+.||++++++..+ --.--+||..+++-...+.+++.+-++. | ...+++... |.|+.+ ++
T Consensus 322 ~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~~g~~~--G~~~~g~~~d~vll~~f-G~G~t~~~~ 398 (406)
T 2d3m_A 322 GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAK--GLETYGEGLEWGVLLGF-GPGITVETI 398 (406)
T ss_dssp CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHhcccc--CCCccCCCcceEEEEEe-ccchhhhhH
Confidence 9998888899999999886432 1124589999999888888887665422 3 145555443 555554 45
Q ss_pred EEEE
Q 012522 434 VFER 437 (461)
Q Consensus 434 v~~~ 437 (461)
+|+.
T Consensus 399 ll~~ 402 (406)
T 2d3m_A 399 LLHS 402 (406)
T ss_dssp EEEE
T ss_pred Hhhh
Confidence 5554
No 59
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.88 E-value=1.6e-22 Score=199.33 Aligned_cols=250 Identities=17% Similarity=0.239 Sum_probs=171.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~ 150 (461)
+....+|+.+|+++||+++|++++|||.|++|+.++. . . .+..++..+|+ |+++++.+|+|+++||..|+.+
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q-~--~-~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~ 123 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ-N--V-TANYVARHLKI----PFLCLFGACSTSMESIAISSAL 123 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS-S--T-THHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc-h--h-HHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHH
Confidence 3356789999999999999999999999999998873 2 2 56777888865 6999999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|+.+..
T Consensus 124 I~sG~~~~VLVVGaE~~S~aerq--------------------------------------------------------- 146 (347)
T 3lma_A 124 IDGGFAKRALAATSSHNATAERQ--------------------------------------------------------- 146 (347)
T ss_dssp HHTTSCSEEEEEEEECGGGTTCC---------------------------------------------------------
T ss_pred HhcCCCCEEEEEEeccccchhhh---------------------------------------------------------
Confidence 99999999999999999973210
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|+ .|. ++...+|.+.. + .+|||+|+||.....
T Consensus 147 --~r---~p~------------------------------e~g~q~p~ta~---~-------t~dGAGA~VL~~~g~--- 178 (347)
T 3lma_A 147 --FR---YPT------------------------------EYGGQKPGTAT---S-------TVTGSGAVVLSQQPG--- 178 (347)
T ss_dssp --C-----------------------------------------------------------CCCEEEEEEEESSCC---
T ss_pred --cc---Ccc------------------------------hhcccCCchhc---E-------EccceeEEEEEecCC---
Confidence 00 000 01111222211 2 479999999996531
Q ss_pred cCCCeeEEEEEeeee------ccCCCCCCCcH----HHHHHHHHHHcCCCCCCccEEE---ecCCChHHHHHHHHHcCCC
Q 012522 311 KGLPILGVFRSFSAV------GVDPSVMGIGP----AVAIPAAVKSAGLQIDDINLFE---INEAFASQYVYCIKKLGLD 377 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~------~~~p~~~~~~~----~~ai~~aL~~AGl~~~DID~~e---iheafa~~~~~~~e~LGl~ 377 (461)
.| +|.+.... ..+|..|+.++ ...+.+.|+++|++++|+|+|. +|+....+....++++|++
T Consensus 179 ---~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~ 253 (347)
T 3lma_A 179 ---GI--KITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGIN 253 (347)
T ss_dssp ---SE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCC
T ss_pred ---CC--ceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCC
Confidence 22 23322211 13555555433 3567899999999999999999 7788887788889999999
Q ss_pred CCCcCCCCCcccccCc-h--------hhHHHHHHHHHHHHHHccCCCCCEEEEEeccc-------------CcceeEEEE
Q 012522 378 PEKVNVNGGAVALGHP-L--------GATGARCVATLLSEMKRRGKDCRFGVISMCIG-------------SGMGAAAVF 435 (461)
Q Consensus 378 ~~~vn~~GG~~~~Ghp-~--------gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g-------------~G~g~A~v~ 435 (461)
.+++...=|..-|+.. . ||+.......++.+|++. ..++.|+...+. -++.-|+++
T Consensus 254 ~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g--~~~ril~~~tGalls~~~~~q~~sip~iah~v~~ 331 (347)
T 3lma_A 254 VGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAG--RLNRVLVVATGALLSPTIIQQKESIPCIAHGVVF 331 (347)
T ss_dssp CGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTT--SCSEEEEEEEEECCCHHHHHTTCCCCEEEEEEEE
T ss_pred hhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcC--cccEEEEEecccccCcchhccCCccChhhEEEEE
Confidence 8665443233334432 2 677777777888899855 445444443322 133468889
Q ss_pred EEccc
Q 012522 436 ERGDC 440 (461)
Q Consensus 436 ~~~~~ 440 (461)
|+.++
T Consensus 332 e~~~~ 336 (347)
T 3lma_A 332 ERAER 336 (347)
T ss_dssp EEC--
T ss_pred Eeecc
Confidence 88763
No 60
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.88 E-value=1.3e-21 Score=199.86 Aligned_cols=255 Identities=16% Similarity=0.138 Sum_probs=175.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++...+ +++++.+|+++++||..|+.+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988 44 6889999999999975443 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+++|||+|+|.+|..
T Consensus 179 ~sg~~~~vLvvg~E~~s~~------------------------------------------------------------- 197 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLS------------------------------------------------------------- 197 (393)
T ss_dssp HHSTTCEEEEEEEECGGGT-------------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchh-------------------------------------------------------------
Confidence 9999999999999999740
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|. ++++ .+.+++ ..+..+||||+|+||+..+... .
T Consensus 198 -~~-----------------------~~~d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~~-~ 232 (393)
T 3ov2_A 198 -FR-----------------------GPNE-----GDFEAL---------------AGQAGFGDGAGAVVVGADPLEG-I 232 (393)
T ss_dssp -CC-----------------------CCCT-----TCHHHH---------------HHHHHBCCEEEEEEEESSCCTT-T
T ss_pred -cc-----------------------CCcc-----cchhhh---------------cccccccCccEEEEEEecCCCc-c
Confidence 00 0000 001111 0112279999999998764321 1
Q ss_pred CCCeeEEEEEeeeeccCC--C-------------CCCC--------cHHHHHHHHHHHcCCCC-CCccEEEecCCChHHH
Q 012522 312 GLPILGVFRSFSAVGVDP--S-------------VMGI--------GPAVAIPAAVKSAGLQI-DDINLFEINEAFASQY 367 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~p--~-------------~~~~--------~~~~ai~~aL~~AGl~~-~DID~~eiheafa~~~ 367 (461)
..+.-.+...+....+. . .+.. ....+++++|+++|+++ +|| +|.+|+++..+.
T Consensus 233 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~ 310 (393)
T 3ov2_A 233 -EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAII 310 (393)
T ss_dssp -CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHH
T ss_pred -cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHH
Confidence 11211333222111000 0 0011 12368899999999997 888 899999999999
Q ss_pred HHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHH-H-ccCCCC---CEEEEEecccCccee-EEEEEEc
Q 012522 368 VYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEM-K-RRGKDC---RFGVISMCIGSGMGA-AAVFERG 438 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L-~-~~~~~~---~~gl~~~~~g~G~g~-A~v~~~~ 438 (461)
....+.||++++++..+ --.--+||...+|-...+.+++.+. + ++++.+ ..+++.. .|.|+.+ +++|++.
T Consensus 311 ~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~-fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 311 DAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLG-FGPGLSIETVVLRSM 387 (393)
T ss_dssp HHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEE-ECccceeeeeeeEEc
Confidence 99999999999986321 0013478988888666666665541 1 222222 5555554 3666665 5555554
No 61
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.88 E-value=1.8e-21 Score=225.30 Aligned_cols=278 Identities=19% Similarity=0.223 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCC--------------------c---cchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS--------------------T---RAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~--------------------~---~~~~a~~ia~-~ 121 (461)
..|+.+++.+||+++|++ |.+ |+ ++++|+..++.. + ....+.+++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 468889999999999998 766 34 677777654310 0 1124567777 4
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++...+ +++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~----------------------~~f---- 1318 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS----------------------YEF---- 1318 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH----------------------HHH----
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH----------------------HHH----
Confidence 888 6899999999999999999999999999999999999999775211 000
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
...+..-+..++++ .| .++++ .+|| |+.
T Consensus 1319 --~~m~als~~~de~a------------~g-------------------------~~p~~------------~~RP-fd~ 1346 (1878)
T 2uv9_A 1319 --ANMGATSNAKEEFA------------RG-------------------------REPGE------------MSRP-TST 1346 (1878)
T ss_dssp --HHHTCBCCHHHHHT------------TT-------------------------CCTTS------------SCCS-SBT
T ss_pred --HHhhhhccchhhhh------------cC-------------------------CCccc------------CcCC-Ccc
Confidence 00010000001111 00 12233 3455 654
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC----CCcH-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM----GIGP------------------- 336 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~----~~~~------------------- 336 (461)
+|++ .+||++++||++.+.|.++|.++++.|.+++.+....... +.+.
T Consensus 1347 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~ 1419 (1878)
T 2uv9_A 1347 TRNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIK 1419 (1878)
T ss_dssp TCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHH
T ss_pred CCCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchH
Confidence 7888 8999999999999999999999999999998875321100 1110
Q ss_pred --------------------------------------------------------------------------------
Q 012522 337 -------------------------------------------------------------------------------- 336 (461)
Q Consensus 337 -------------------------------------------------------------------------------- 336 (461)
T Consensus 1420 ~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~ 1499 (1878)
T 2uv9_A 1420 YRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSR 1499 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTT
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChH
Confidence
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH----HHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQ----YVY----CIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLS 407 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~----~~~----~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~ 407 (461)
..+++++|+++||+++|||++|.|..++.. +.. ....++-.. .++..+.-+..+|||.||+|+.+++.++.
T Consensus 1500 ~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~ 1579 (1878)
T 2uv9_A 1500 IAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQ 1579 (1878)
T ss_dssp SCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHH
Confidence 168999999999999999999999998832 111 112333332 23333333445799999999999999999
Q ss_pred HHHcc--------------C---------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 408 EMKRR--------------G---------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 408 ~L~~~--------------~---------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+|+.+ + .+.+++++++++-||.+..+|++..+
T Consensus 1580 ~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1580 VLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp HHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 99975 0 13467888887777788888888664
No 62
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.88 E-value=3.1e-21 Score=218.76 Aligned_cols=256 Identities=12% Similarity=0.053 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC-CCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-VPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~-~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|+++++||.|+++++.+. . .+..+..++..+|++.. .++++++.+|+|++.||..|.++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGV-E-MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCC-C-CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 5569999999999999999999999999986543 3 57889999999999532 4579999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|.++++||+|+|.++....
T Consensus 767 sG~~~~vLvvg~e~~~~~~~------------------------------------------------------------ 786 (979)
T 3tsy_A 767 NNAGARVLVVCSEITVVTFR------------------------------------------------------------ 786 (979)
T ss_dssp TSTTCEEEEEEEECTTTTCC------------------------------------------------------------
T ss_pred hCCCCEEEEEEEEecchhee------------------------------------------------------------
Confidence 99999999999998765110
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
. +...+++.+. +++.+||||+|+||++.+.+...+
T Consensus 787 --~----------------------------~~~~~~~~~~---------------~~~lfGDGA~A~vL~~~~~~~~~~ 821 (979)
T 3tsy_A 787 --G----------------------------PSEDALDSLV---------------GQALFGDGSAAVIVGSDPDISIER 821 (979)
T ss_dssp --C----------------------------CCSSCHHHHH---------------HHHHBCCEEEEEEEESSCCSSSCC
T ss_pred --C----------------------------CCccCHHHHh---------------hhhhccCceEEEEEecCCCccccC
Confidence 0 0001111111 122379999999999876554344
Q ss_pred CCeeEEEEEeeeeccCCC-----CCCC----------------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH
Q 012522 313 LPILGVFRSFSAVGVDPS-----VMGI----------------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371 (461)
Q Consensus 313 ~~~~a~i~g~~~~~~~p~-----~~~~----------------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~ 371 (461)
........+......... .... ....+++++|+++|++++|||+|.+|+++........
T Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~ 901 (979)
T 3tsy_A 822 PLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVE 901 (979)
T ss_dssp CCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHH
T ss_pred cceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHH
Confidence 444333333332211100 0000 1457899999999999999999999999999999999
Q ss_pred HHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc--C-C--CCCEEEEEecccCcceeEEEEEE
Q 012522 372 KKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR--G-K--DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 372 e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~--~-~--~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.||++++++..+-- .--+||...||-...+.+++.+++.. + + +..++++.. .|+|+.++.++-+
T Consensus 902 ~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~-~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 902 AKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFG-FGPGLTIETVVLH 972 (979)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-ECGGGEEEEEEEE
T ss_pred HHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEE-eCCchHHHHHHHH
Confidence 999999998754200 13479999888877777777766543 1 0 112345544 3666665444443
No 63
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.4e-23 Score=229.38 Aligned_cols=276 Identities=19% Similarity=0.222 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCCc-----------------------cchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGST-----------------------RAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~~-----------------------~~~~a~~ia~-~ 121 (461)
..|+.+++++||+++|++ |.+ |+ ++++|+..++... ....+.+++. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 569999999999999998 665 33 5666655444210 1124556776 6
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++..++. .+..|+.+
T Consensus 1093 LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~-----------------~Fa~mgaL--- 1150 (1688)
T 2pff_A 1093 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-----------------EFGNMKAT--- 1150 (1688)
T ss_dssp CCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTT-----------------TTTTTSCS---
T ss_pred cCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHH-----------------HHHhcccc---
Confidence 888 68999999999999999999999999999999999999998763321 00000000
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
.. ...+-.. -.++++ .+|| |+.
T Consensus 1151 --------------------------------S~-------~~~e~a~------G~~Pd~------------~cRP-Fd~ 1172 (1688)
T 2pff_A 1151 --------------------------------SN-------TLEEFEH------GRTPAE------------MSRP-ATT 1172 (1688)
T ss_dssp --------------------------------CC-------TTTTTTS------SCCSSS------------SCCS-SSS
T ss_pred --------------------------------cc-------Chhhhhc------CCChhh------------ccCc-Ccc
Confidence 00 0000000 011222 3455 654
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----C-CCC-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----V-MGI------------------- 334 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~-~~~------------------- 334 (461)
+|++ ++|||+++||++.+.|.++|.++++.|.+++.+..... . .+.
T Consensus 1173 ~rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld 1245 (1688)
T 2pff_A 1173 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1245 (1688)
T ss_dssp SCCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSC
T ss_pred CCCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccC
Confidence 6777 89999999999999999999999999999887653211 0 010
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012522 335 ------------------------------------------------------------------------GPAVAIPA 342 (461)
Q Consensus 335 ------------------------------------------------------------------------~~~~ai~~ 342 (461)
+...++++
T Consensus 1246 ~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ 1325 (1688)
T 2pff_A 1246 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1325 (1688)
T ss_dssp TTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHH
Confidence 00357899
Q ss_pred HHHHcCCCCCCccEEEecCCChH----------HHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 343 AVKSAGLQIDDINLFEINEAFAS----------QYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~----------~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
+|+++||+++|||++|.|..++. ...+ ..++-.. .++....-+..+|||.||+|+.+++.++.+|+.
T Consensus 1326 ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af--~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~ 1403 (1688)
T 2pff_A 1326 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMM--KHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNS 1403 (1688)
T ss_dssp HTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGT--GGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTT
T ss_pred HHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHH--hhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHc
Confidence 99999999999999998877772 2221 1223321 233333334457999999999999999999997
Q ss_pred c-C----------------------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 412 R-G----------------------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 412 ~-~----------------------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ + ++.+++++++.+-||.+..+|++..+
T Consensus 1404 G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1404 GIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp CCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred CCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 6 1 13456777777667778888888764
No 64
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.87 E-value=9e-21 Score=193.44 Aligned_cols=254 Identities=13% Similarity=0.082 Sum_probs=178.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++...+ +++++.+|+|++.||..|+++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV-D-MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 3 5778999999999965453 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|..
T Consensus 174 i~~g~~~~vLvvg~e~~s~~------------------------------------------------------------ 193 (387)
T 3a5r_A 174 AENNKGARVLIVCSEMTTTC------------------------------------------------------------ 193 (387)
T ss_dssp HHHSTTCEEEEEEEECCTTT------------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEeccchh------------------------------------------------------------
Confidence 99999999999999998861
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|.+ | ++.- ++ ...++..+||||+|+||.+.+..
T Consensus 194 --~~~-----------~------------~d~~---------------~~-----~~~~~~lfGDGA~A~vl~~~~~~-- 226 (387)
T 3a5r_A 194 --FRG-----------P------------SETH---------------LD-----SMIGQAILGDGAAAVIVGADPDL-- 226 (387)
T ss_dssp --CCC-----------C------------CSSC---------------CS-----STTHHHHBCCEEEEEEEESSCCT--
T ss_pred --hcC-----------C------------Cccc---------------hh-----hccccceeccceeEEEEecCCCc--
Confidence 000 0 0000 00 00011228999999999875431
Q ss_pred cC-CCeeEEEEEeeeeccCCC----------------CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCh
Q 012522 311 KG-LPILGVFRSFSAVGVDPS----------------VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFA 364 (461)
Q Consensus 311 ~g-~~~~a~i~g~~~~~~~p~----------------~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa 364 (461)
+ ..+..++.+.+.... |. .++. ....+++++|+++|++ .+|| +|.+|+++.
T Consensus 227 -~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 303 (387)
T 3a5r_A 227 -TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGP 303 (387)
T ss_dssp -TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCH
T ss_pred -cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCH
Confidence 1 111123333322110 10 0111 1235788999999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~ 435 (461)
.......+.||++++++..+ --.--+||..+++-...+.+++.+-++. | ....++... |.|+.+ +++|
T Consensus 304 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~G~~~d~vll~~f-G~G~t~~~~ll 380 (387)
T 3a5r_A 304 AILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLEN--GQATTGEGLEWGVLFGF-GPGITVETVVL 380 (387)
T ss_dssp HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcccc--CCCCCCCCcceEEEEEe-cCcceeeehhh
Confidence 88888899999999886431 0023589999999888888877765422 3 145555443 555554 5566
Q ss_pred EEccc
Q 012522 436 ERGDC 440 (461)
Q Consensus 436 ~~~~~ 440 (461)
+..+.
T Consensus 381 ~~~~~ 385 (387)
T 3a5r_A 381 RSVPV 385 (387)
T ss_dssp EECBC
T ss_pred eeccc
Confidence 55443
No 65
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.86 E-value=1.5e-20 Score=191.85 Aligned_cols=253 Identities=14% Similarity=0.083 Sum_probs=176.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++...+ +++++.+|+|++.||..|+++
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~ 177 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD--MPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDL 177 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCC--CchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988743 5778999999999965455 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.++++||+|+|.+|..-..
T Consensus 178 i~~g~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 200 (389)
T 1i88_A 178 AENNKGARVLVVCSEVTAVTFRG--------------------------------------------------------- 200 (389)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEecccHhHcC---------------------------------------------------------
Confidence 99999999999999998861000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
| +| .+.++.. .+.+ +||||+|+||++.+.. .
T Consensus 201 ----------------~------------~d-----~~~~~~~--------~~~l-------fGDGA~A~vl~~~~~~-~ 231 (389)
T 1i88_A 201 ----------------P------------SD-----THLDSLV--------GQAL-------FGDGAAALIVGSDPVP-E 231 (389)
T ss_dssp ----------------C------------CT-----TCHHHHH--------HHHH-------BCCEEEEEEEESSCCT-T
T ss_pred ----------------c------------cc-----ccccccc--------ccce-------EecceEEEEEecCCCC-c
Confidence 0 00 0000000 0113 7999999999875431 1
Q ss_pred cCCCeeEEEEEeeeeccCC--C-------------CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHH
Q 012522 311 KGLPILGVFRSFSAVGVDP--S-------------VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFASQ 366 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~p--~-------------~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa~~ 366 (461)
. ..+..++...+...... . .++. ....+++++|+++|++ .+|| +|.+|+++...
T Consensus 232 ~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i 309 (389)
T 1i88_A 232 I-EKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHPGGPAI 309 (389)
T ss_dssp T-SCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHH
T ss_pred c-CCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHH
Confidence 0 11112333322211000 0 0111 1236788999999998 8899 99999999998
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEEEE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.....+.||++++++..+ --.--+||..++|-...+.+++.+-++. | ...++.... |.|+.+ +++|+.
T Consensus 310 ~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~g~~~d~vll~~f-G~G~t~~~~ll~~ 386 (389)
T 1i88_A 310 LDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQN--GLKTTGEGLEWGVLFGF-GPGLTIETVVLRS 386 (389)
T ss_dssp HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcccc--CCcccCCCCceEEEEEe-cCccEEEEEEEEe
Confidence 888999999999886431 1123589999999888787777665422 3 145555443 555565 445543
No 66
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.86 E-value=1.8e-20 Score=192.06 Aligned_cols=253 Identities=13% Similarity=0.094 Sum_probs=176.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.++.+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++ +++++.+|+|++.||..|+++
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGV-D-MPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDL 190 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-CChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998873 3 5778999999999975455 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|..-..
T Consensus 191 i~sg~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 213 (402)
T 3awk_A 191 AENNKGARVLVACSEVTAVTFRA--------------------------------------------------------- 213 (402)
T ss_dssp HHTSTTCEEEEEEEECTTTTCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchhhcC---------------------------------------------------------
Confidence 99999999999999998861000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++| .+.++.. .+.+ +||||+|+||.+.+.. .
T Consensus 214 ----------------------------~~d-----~~~~~~~--------~~~l-------fGDGA~A~vl~~~~~~-~ 244 (402)
T 3awk_A 214 ----------------------------PSE-----THLDGLV--------GSAL-------FGDGAAALIVGSDPVP-Q 244 (402)
T ss_dssp ----------------------------CCT-----TCHHHHH--------HHHH-------BCCEEEEEEEESSCCT-T
T ss_pred ----------------------------CCc-----cCHHHhh--------cccc-------ccCceEEEEEecCCCc-c
Confidence 000 0000000 0113 7999999999875421 1
Q ss_pred cCCCeeEEEEEeeeeccC-----------CC----CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHH
Q 012522 311 KGLPILGVFRSFSAVGVD-----------PS----VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFASQ 366 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~-----------p~----~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa~~ 366 (461)
. ..+..++.+.+....+ .. .++. ....+++++|+++|++ .+|| +|.+|+++...
T Consensus 245 ~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i 322 (402)
T 3awk_A 245 E-EKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDM-FWAVHPGGPAI 322 (402)
T ss_dssp T-CCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHHHHTTCCCGGGE-EEEECCSCHHH
T ss_pred c-cCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCcHHH
Confidence 0 1111233333221100 00 0111 1235778999999998 7888 89999999998
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEEEE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.....+.||++++++..+ --.--+||...++-...+.+++.+-++. | ...+++... |.|+.+ +++|+.
T Consensus 323 ~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~g~g~d~vll~~f-G~G~t~~~~ll~~ 399 (402)
T 3awk_A 323 LDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEEL--HLPTTGEGFEWGFVIGF-GPGLTVETLLLRS 399 (402)
T ss_dssp HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhcccc--CCCcCCCCcceEEEEEe-cccceeeeheeee
Confidence 888999999999986431 1123589999999887777777665422 3 145555443 555555 455554
No 67
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.86 E-value=6.7e-20 Score=187.72 Aligned_cols=257 Identities=12% Similarity=0.067 Sum_probs=177.1
Q ss_pred eeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CC
Q 012522 57 YRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NR 135 (461)
Q Consensus 57 ~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~ 135 (461)
.+|+|.+ +...+. .+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +.
T Consensus 122 ~rtgi~~-R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~-~P~~a~~v~~~LGl~~~~~~~~v~~~ 197 (413)
T 3v7i_A 122 ASQTVQE-RTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-A-LPGLDVALANRLPLRGDTMLLPATQW 197 (413)
T ss_dssp CCCCHHH-HHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-C-SSCHHHHHHHHTTCCTTCEEEEESSC
T ss_pred cCCCHHH-hCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-C-cCHHHHHHHHHhCCCCCceEEEeeCC
Confidence 4666655 222222 367899999999999999999999999999999874 3 57889999999999766788999 99
Q ss_pred CCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHH
Q 012522 136 QCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDL 215 (461)
Q Consensus 136 ~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~ 215 (461)
+|+++++||..|+.+|++|.+++|||+|+|.+|..
T Consensus 198 ~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~--------------------------------------------- 232 (413)
T 3v7i_A 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTT--------------------------------------------- 232 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG---------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc---------------------------------------------
Confidence 99999999999999999999999999999999871
Q ss_pred HHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccc
Q 012522 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295 (461)
Q Consensus 216 ~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~D 295 (461)
|+ ++| .+.+.+. .+..+||
T Consensus 233 -----------------~~------------------------~~d-----~~~~~lv---------------~~~LFGD 251 (413)
T 3v7i_A 233 -----------------YQ------------------------PAD-----DTLESLI---------------VRLLFAD 251 (413)
T ss_dssp -----------------CC------------------------SSC-----CSTTHHH---------------HHHHBCC
T ss_pred -----------------cC------------------------ccc-----cchhhhh---------------cceeecc
Confidence 10 000 0001110 1122799
Q ss_pred cceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC----------------CC-CC------cHHHHHHHHHH------H
Q 012522 296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----------------VM-GI------GPAVAIPAAVK------S 346 (461)
Q Consensus 296 GAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~----------------~~-~~------~~~~ai~~aL~------~ 346 (461)
||+|+||...+.. .+.-.+.+..... .|. .+ +. ....+++++|+ +
T Consensus 252 GAaAvvl~~~~~~-----~~~~~l~~~~~~~-~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~ 325 (413)
T 3v7i_A 252 TAVAAVVTGRPRP-----ESVLRLDAAWHHT-LPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDP 325 (413)
T ss_dssp EEEEEEEESSCCT-----TEEEEEEEEEEEE-CTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ccEEEEEEecCCC-----CCCEEEEccccEE-eCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999876421 1111333322111 010 00 00 12367889999 8
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcC--CCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 347 AGLQIDDINLFEINEAFASQYVYCIKKLG--LDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 347 AGl~~~DID~~eiheafa~~~~~~~e~LG--l~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
+|++ ||+|.+|+.+..+.....+.|| |+++++..+ --.- +||...+|-...+.+++ +++++.+..++...
T Consensus 326 ~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~---~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 326 SSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH---DAGQKTGSRAVLYA 398 (413)
T ss_dssp TTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH---HHCCCTTCEEEEEE
T ss_pred CCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH---hCCCCCCCEEEEEE
Confidence 9988 9999999999999999999999 999987210 0023 78877777554444443 23333445555544
Q ss_pred cccCcceeEEEEEE
Q 012522 424 CIGSGMGAAAVFER 437 (461)
Q Consensus 424 ~~g~G~g~A~v~~~ 437 (461)
.|.|+.+..++-+
T Consensus 399 -fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 399 -AAPGLTATALEGE 411 (413)
T ss_dssp -EETTTEEEEEEEE
T ss_pred -ECHHHhHhhhheE
Confidence 3666666554443
No 68
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.86 E-value=1.5e-20 Score=193.23 Aligned_cols=253 Identities=13% Similarity=0.065 Sum_probs=177.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.++.+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..+|++..++ +++++.+|+|++.||..|+++
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~ 195 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VN-MPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDL 195 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cc-cCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999887 33 5778999999999975455 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|..-..
T Consensus 196 i~sg~~~~vLvvg~E~~s~~~~~--------------------------------------------------------- 218 (413)
T 2p0u_A 196 AENNAGARVLAICSEVTAVTFRA--------------------------------------------------------- 218 (413)
T ss_dssp HHHSTTCEEEEEEEECSTTTCCC---------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEhhcchhccC---------------------------------------------------------
Confidence 99999999999999998861000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
+++ ...++.. .+.+ +||||+|+||++.+.. .
T Consensus 219 ----------------------------~~d-----~~~~~~~--------~~~l-------fGDGA~A~vl~~~~~~-~ 249 (413)
T 2p0u_A 219 ----------------------------PSE-----THIDGLV--------GSAL-------FGDGAAAVIVGSDPRP-G 249 (413)
T ss_dssp ----------------------------CCT-----TCHHHHH--------HHHH-------BCCEEEEEEEESSCCT-T
T ss_pred ----------------------------CCc-----cChhhhc--------ccce-------eecccEEEEEecCCCc-c
Confidence 000 0000000 0113 7999999999875431 1
Q ss_pred cCCCeeEEEEEeeeeccCC--C-------------CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHH
Q 012522 311 KGLPILGVFRSFSAVGVDP--S-------------VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFASQ 366 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~p--~-------------~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa~~ 366 (461)
. ..+...+.+.+...... . .++. ....+++++|+++|++ .+|| +|.+|+++...
T Consensus 250 ~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i 327 (413)
T 2p0u_A 250 I-ERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPAI 327 (413)
T ss_dssp T-CCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHHH
T ss_pred c-cCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHHHHHHcCCCCccce-EEEECCCCHHH
Confidence 0 11112333332211000 0 0111 1236788999999998 8888 89999999998
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEEEE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.....+.||++++++..+ --.--+||...+|-...+.+++.+-++. | ...+++... |.|+.+ +++|+.
T Consensus 328 ~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~g~~~d~vll~~f-G~G~t~~~~ll~~ 404 (413)
T 2p0u_A 328 LDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLES--NKSTFGEGSEWGFLIGF-GPGLTVETLLLRA 404 (413)
T ss_dssp HHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEEEE
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhcccc--CCcccCCCcceEEEEEe-CccceeeeeeEEE
Confidence 888999999999886431 0123589999999888887777765422 3 145555443 556555 455554
No 69
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.86 E-value=8.1e-21 Score=193.11 Aligned_cols=257 Identities=17% Similarity=0.107 Sum_probs=169.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|++++|||.|++++++ +.. .+..+..++..||++.....+++ +.+|+++++||..|.++|
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~-~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 157 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLC 157 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCC-CCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHH
Confidence 457999999999999999999999999999988 444 57889999999999654448999 799999999999999999
Q ss_pred Hc----CCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Q 012522 152 KA----GLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAA 227 (461)
Q Consensus 152 ~s----G~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a 227 (461)
++ |.++.+||+|+|.+|..-. .. .+. ...
T Consensus 158 ~a~~~~G~~~~vLvv~~E~~s~~~~------------------------~~--------------~~~---------~~~ 190 (379)
T 3euo_A 158 LGHTARGKPARILVLALEVSTTMVR------------------------SE--------------LES---------IDA 190 (379)
T ss_dssp HHHHHTTCCCEEEEEEEECCGGGHH------------------------HH--------------HHH---------HHH
T ss_pred HhccccCCCCEEEEEEEEeehhhhc------------------------Cc--------------ccc---------ccc
Confidence 97 9999999999999987110 00 000 000
Q ss_pred hhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhH
Q 012522 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 307 (461)
Q Consensus 228 ~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~ 307 (461)
+ . -+ +..++.+||||+|+||+..+.
T Consensus 191 ~----~---------------------------------------------~d------~~~~~LFGDGAaAvvl~~~~~ 215 (379)
T 3euo_A 191 L----Q---------------------------------------------ET------RIGIALFSDCASAVILSNGIG 215 (379)
T ss_dssp H----C---------------------------------------------CC------CCHHHHBCCEEEEEEEECCTT
T ss_pred c----H---------------------------------------------HH------hhcceeecCccEEEEEecCCC
Confidence 0 0 00 011223899999999997643
Q ss_pred HHhcCCCeeEEEEEeeeecc-----------CCC----CCCC--------cHHHHHHHHHHH-------cCCCCCCccEE
Q 012522 308 AVQKGLPILGVFRSFSAVGV-----------DPS----VMGI--------GPAVAIPAAVKS-------AGLQIDDINLF 357 (461)
Q Consensus 308 A~~~g~~~~a~i~g~~~~~~-----------~p~----~~~~--------~~~~ai~~aL~~-------AGl~~~DID~~ 357 (461)
.. ....+...++++..... ... ..+. ....+++++|++ +|++++|||++
T Consensus 216 ~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~ 294 (379)
T 3euo_A 216 EA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA 294 (379)
T ss_dssp CC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE
T ss_pred Cc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHeeEE
Confidence 11 01122224443322110 000 0011 124677888886 58999999988
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCc-ccccCchhhHHHHHHHHHHHHHHccCC-C---CCEEEEEecccCcceeE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGA-VALGHPLGATGARCVATLLSEMKRRGK-D---CRFGVISMCIGSGMGAA 432 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~-~~~Ghp~gatG~~~~~~~~~~L~~~~~-~---~~~gl~~~~~g~G~g~A 432 (461)
+|+++..+.....+.|||+++++..+=-. --+||...+|-...+.+++.+=+.+++ + ..+++... .|.|+.+.
T Consensus 295 -~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~l~~Gg~~~d~vll~~-fG~G~t~~ 372 (379)
T 3euo_A 295 -MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGINVE 372 (379)
T ss_dssp -ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSHHHHTTCGGGCCCSEEEEEE-EETTTEEE
T ss_pred -eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEEE-ECcccEeE
Confidence 99999999999999999999986432100 135888877755444444432100211 1 14555543 36666664
Q ss_pred EEEE
Q 012522 433 AVFE 436 (461)
Q Consensus 433 ~v~~ 436 (461)
.++-
T Consensus 373 ~~ll 376 (379)
T 3euo_A 373 MCML 376 (379)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 70
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.85 E-value=3.1e-20 Score=190.38 Aligned_cols=251 Identities=13% Similarity=0.092 Sum_probs=176.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++ +++++.+|+|++.||..|+++
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~ 182 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGV-D-MPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDL 182 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCC-E-ESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 3 5678999999999975453 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|..
T Consensus 183 i~~g~~~~vLvvg~E~~s~~------------------------------------------------------------ 202 (402)
T 1ee0_A 183 AENNKGSRVLIVCSEITAIL------------------------------------------------------------ 202 (402)
T ss_dssp HHHSTTCCEEEEEEECGGGG------------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchh------------------------------------------------------------
Confidence 99999999999999998861
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|.+ | ++ ...++ ...+..+||||+|+||.+.+..
T Consensus 203 --~~~-----------~------------~d-----~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~-- 235 (402)
T 1ee0_A 203 --FHG-----------P------------NE-----NHLDS---------------LVAQALFGDGAAALIVGSGPHL-- 235 (402)
T ss_dssp --CCC-----------C------------CT-----TCHHH---------------HHHTTTBCCEEEEEEEESSCCT--
T ss_pred --hcC-----------C------------cc-----cchhh---------------hccceeEecceEEEEEecCCCc--
Confidence 000 0 00 00000 0011228999999999875421
Q ss_pred cC-CCeeEEEEEeeeeccCCC----------------CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCh
Q 012522 311 KG-LPILGVFRSFSAVGVDPS----------------VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFA 364 (461)
Q Consensus 311 ~g-~~~~a~i~g~~~~~~~p~----------------~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa 364 (461)
+ ..+..++.+.+.... |. .++. ....+++++|+++|++ .+|| +|.+|+++.
T Consensus 236 -~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 312 (402)
T 1ee0_A 236 -AVERPIFEIVSTDQTIL-PDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGR 312 (402)
T ss_dssp -TTCCCCEEEEEEEEEEC-TTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSH
T ss_pred -cccCCceEEEeeeeEEc-CCchHhcCceeccCceEEEecchHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCCCH
Confidence 2 111123333322110 00 0111 1236788999999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~ 435 (461)
.......+.||++++++..+ --.--+||..+++-...+.+++.+-++. | ....++... |.|+.+ +++|
T Consensus 313 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~G~~~d~vll~~f-G~G~t~~~~ll 389 (402)
T 1ee0_A 313 AILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAE--GKSTTGEGLDCGVLFGF-GPGMTVETVVL 389 (402)
T ss_dssp HHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTBTTBSEEEEEEE-ETTTEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHHhcccc--CCCCCCCCcceEEEEEe-cCCcEEEEEEE
Confidence 88888999999999886431 1124589999999888887777665422 3 144444443 555555 4455
Q ss_pred EE
Q 012522 436 ER 437 (461)
Q Consensus 436 ~~ 437 (461)
+.
T Consensus 390 ~~ 391 (402)
T 1ee0_A 390 RS 391 (402)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 71
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.85 E-value=2e-20 Score=192.42 Aligned_cols=250 Identities=14% Similarity=0.119 Sum_probs=176.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP-D-LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998873 3 5778899999999965453 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.++++||+|+|.+|..
T Consensus 202 ~~G~~~~vLvvg~E~~s~~------------------------------------------------------------- 220 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVT------------------------------------------------------------- 220 (413)
T ss_dssp HTSTTCCEEEEEEECTTTT-------------------------------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhh-------------------------------------------------------------
Confidence 9999999999999998861
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|.+ +++ ...++.. .+.+ +||||+|+||++.+..
T Consensus 221 -~~~-----------------------~~d-----~~~~~~~--------~~~l-------fGDGA~A~vl~~~~~~--- 253 (413)
T 1xes_A 221 -FRG-----------------------PSE-----THLDSLV--------GQAL-------FGDGASALIVGADPIP--- 253 (413)
T ss_dssp -CCC-----------------------CCT-----TCHHHHH--------HHHH-------BCCEEEEEEEESSCCT---
T ss_pred -hcC-----------------------CCc-----cchhhcc--------ccee-------EecccEEEEEecCCCc---
Confidence 000 000 0000000 1123 7999999999875431
Q ss_pred CC-CeeEEEEEeeeeccCCC----------------CCC--------CcHHHHHHHHHHHcCCC-CCCccEEEecCCChH
Q 012522 312 GL-PILGVFRSFSAVGVDPS----------------VMG--------IGPAVAIPAAVKSAGLQ-IDDINLFEINEAFAS 365 (461)
Q Consensus 312 g~-~~~a~i~g~~~~~~~p~----------------~~~--------~~~~~ai~~aL~~AGl~-~~DID~~eiheafa~ 365 (461)
+. .+...+.+.+.... |. .++ .....+++++|+++|++ .+|| +|.+|+++..
T Consensus 254 ~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~ 331 (413)
T 1xes_A 254 QVEKACFEIVWTAQTVV-PNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRA 331 (413)
T ss_dssp TTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHH
T ss_pred cccCCceEEEeeeeEEc-CCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHH
Confidence 21 11123433322110 00 011 11235788999999998 8888 8999999998
Q ss_pred HHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEEE
Q 012522 366 QYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 366 ~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
......+.||++++++..+ --.--+||...++-...+.+++.+-++. | ....|+... |.|+.+ +++|+
T Consensus 332 i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~G~~~d~vll~~f-G~G~t~~~~ll~ 408 (413)
T 1xes_A 332 ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQN--GCSTTGEGLEMGVLFGF-GPGLTIETVVLK 408 (413)
T ss_dssp HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEEE
T ss_pred HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcccc--CCCCCCCCcceEEEEEe-cCCcEEeEEEEE
Confidence 8888999999999986321 0023589999999888888877765422 3 145555443 555555 44554
Q ss_pred E
Q 012522 437 R 437 (461)
Q Consensus 437 ~ 437 (461)
.
T Consensus 409 ~ 409 (413)
T 1xes_A 409 S 409 (413)
T ss_dssp E
T ss_pred e
Confidence 3
No 72
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.85 E-value=1.2e-20 Score=195.72 Aligned_cols=253 Identities=18% Similarity=0.161 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHHHc
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAIKA 153 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I~s 153 (461)
.+|+.+|+++||+++|++++|||.||+++++ +.. .+..+.+++..||++.....+++ +.+|+++++||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999987 444 67889999999999654448999 79999999999999999997
Q ss_pred ----CCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 154 ----GLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 154 ----G~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
|.++.|||+|+|.+|.... + . .+ + ..++
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~~~---------~-------------~----------------~~-----~----~~~~- 220 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTMVR---------S-------------E----------------LE-----S----IDAL- 220 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGGHH---------H-------------H----------------HH-----H----HHHH-
T ss_pred ccccCCCCEEEEEEEeecchhcC---------c-------------c----------------cc-----c----cccc-
Confidence 9999999999999987110 0 0 00 0 0000
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
.+ .+..+..+||||+|+||...+...
T Consensus 221 ---~~---------------------------------------------------d~~t~~LFGDGAaAvVl~~~~~~~ 246 (465)
T 3e1h_A 221 ---QE---------------------------------------------------TRIGIALFSDCASAVILSNGIGEA 246 (465)
T ss_dssp ---TC---------------------------------------------------CCCHHHHBCCEEEEEEEECCTTCC
T ss_pred ---cc---------------------------------------------------ccccccccccceeEEEEEccCCCc
Confidence 00 001122389999999998754211
Q ss_pred hcCCCeeEEEEEeeeeccC-----------CC----CCCC--------cHHHHHHHHHHH-------cCCCCCCccEEEe
Q 012522 310 QKGLPILGVFRSFSAVGVD-----------PS----VMGI--------GPAVAIPAAVKS-------AGLQIDDINLFEI 359 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~-----------p~----~~~~--------~~~~ai~~aL~~-------AGl~~~DID~~ei 359 (461)
....+...+.++...... .. ..+. ....+++++|++ +|++++|||+| +
T Consensus 247 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~ 324 (465)
T 3e1h_A 247 -PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M 324 (465)
T ss_dssp -TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E
T ss_pred -cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-e
Confidence 001122234443221100 00 0011 123577888887 68999999988 9
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc----CC-C---CCEEEEEecccCcce
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR----GK-D---CRFGVISMCIGSGMG 430 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~----~~-~---~~~gl~~~~~g~G~g 430 (461)
|+++..+.....+.|||+++++-.+=- .--+||...+|-. -++.+++++ ++ + ..+++... .|.|+.
T Consensus 325 Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip----~aL~~~~~~~~g~l~~Gg~~~d~vll~g-fG~Glt 399 (465)
T 3e1h_A 325 HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIF----SVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGIN 399 (465)
T ss_dssp CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHH----HHHHHHTSTTTTSCSSSSCCCSEEEEEE-EETTTE
T ss_pred cCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHH----HHHHHHHHhcccccCCCCCCCCEEEEEE-EhHHHh
Confidence 999999999999999999998632100 0124777777644 333444322 11 2 14555544 366666
Q ss_pred eEEEEEEc
Q 012522 431 AAAVFERG 438 (461)
Q Consensus 431 ~A~v~~~~ 438 (461)
+..++-+.
T Consensus 400 ~~~~llr~ 407 (465)
T 3e1h_A 400 VEMCMLKR 407 (465)
T ss_dssp EEEEEEEE
T ss_pred hhheeeEE
Confidence 64444443
No 73
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.84 E-value=9e-21 Score=193.92 Aligned_cols=243 Identities=14% Similarity=0.089 Sum_probs=174.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+.+..+|+.+|+++||++ ++|++||.|++|+.+++.. .+..+..++..+|++.++++++++++|+|++.||..|++
T Consensus 47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~ 123 (396)
T 1xpm_A 47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123 (396)
T ss_dssp TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 4678999999999999988 7899999999999888765 678899999999997568999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|. +...
T Consensus 124 ~I~sg~~~~vLvvg~e~-s~~~---------------------------------------------------------- 144 (396)
T 1xpm_A 124 YLATRPNEKVLVIATDT-ARYG---------------------------------------------------------- 144 (396)
T ss_dssp HHTTCTTCEEEEEEEEE-ECCC----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEeehh-hccc----------------------------------------------------------
Confidence 99999999999999996 4310
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC-CCCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~-~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ +++++ +||||+|+||++.+
T Consensus 145 -------------------------------------------------~~~~~~~~-------~GdGA~A~vl~~~~-- 166 (396)
T 1xpm_A 145 -------------------------------------------------LNSGGEPT-------QGAGAVAMVIAHNP-- 166 (396)
T ss_dssp -------------------------------------------------TTCSSGGG-------CEEEEEEEEEEESC--
T ss_pred -------------------------------------------------cCCCCCcc-------cccceEEEEeccCC--
Confidence 00 01223 79999999998642
Q ss_pred HhcCCCeeEEEEEeeeec------cCCCC------CCCc--------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 309 VQKGLPILGVFRSFSAVG------VDPSV------MGIG--------PAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~------~~p~~------~~~~--------~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|+++.....
T Consensus 167 -----~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~ 241 (396)
T 1xpm_A 167 -----SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGK 241 (396)
T ss_dssp -----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHH
T ss_pred -----ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHH
Confidence 1332222211111 11211 1111 457899999999999999999999999998888
Q ss_pred HHHHHc-----CCCCCCcC--C---CCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcce-eEEEEE
Q 012522 369 YCIKKL-----GLDPEKVN--V---NGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMG-AAAVFE 436 (461)
Q Consensus 369 ~~~e~L-----Gl~~~~vn--~---~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g-~A~v~~ 436 (461)
...+.| +++++++. . .--.--+||...+|-...+.+++.+ +++ +|.++.++++ |.|.. .+++++
T Consensus 242 ~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~--~~l~~Gd~ill~s~--GsG~~~~~~~~~ 317 (396)
T 1xpm_A 242 KALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN--RDLQAGETIGLFSY--GSGSVGEFYSAT 317 (396)
T ss_dssp HHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH--SCCCTTCEEEEEEE--ETTTEEEEEEEE
T ss_pred HHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--CcchhheEEEEE
Confidence 777877 66654431 1 0001348999988877666666554 322 3556666654 45544 345555
Q ss_pred Eccch
Q 012522 437 RGDCV 441 (461)
Q Consensus 437 ~~~~~ 441 (461)
..+.+
T Consensus 318 v~~~~ 322 (396)
T 1xpm_A 318 LVEGY 322 (396)
T ss_dssp ECTTG
T ss_pred EcccH
Confidence 55433
No 74
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.84 E-value=1.8e-20 Score=193.28 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=97.0
Q ss_pred EEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC--CCCCC
Q 012522 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF--PETVP 129 (461)
Q Consensus 52 ~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl--~~~~~ 129 (461)
+.+|.+++.+... -.+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++..||+ ..+++
T Consensus 36 ~~~Gig~r~~~va----~~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~-~ps~A~~v~~~LGl~g~~~~~ 110 (460)
T 2v4w_A 36 YTVGLGQTRMGFC----SVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp CCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCB
T ss_pred eeeeeeeEEEEEC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCCCCCCcE
Confidence 3456666664321 14678999999999999999999999999999999988876 67789999999998 34678
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCC--CEEEEEeecccc
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLY--DIGIAAGLESMT 168 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~--d~vLv~G~E~~s 168 (461)
+++++.+|++++.||..|.++|++|.+ +.+||+|+|.++
T Consensus 111 a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC
T ss_pred EEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc
Confidence 999999999999999999999999985 999999999976
No 75
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.83 E-value=9.7e-20 Score=189.14 Aligned_cols=98 Identities=12% Similarity=0.156 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC--CCCCCeEEeCCCCchHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF--PETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl--~~~~~~~~v~~~CaSgl~Al~~A 147 (461)
+++++.+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++..+|+ +..+++++++.+|+|++.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 4788999999999999999999999999999999887765 67889999999998 45789999999999999999999
Q ss_pred HHHHHcCCC--CEEEEEeecccc
Q 012522 148 ATAIKAGLY--DIGIAAGLESMT 168 (461)
Q Consensus 148 ~~~I~sG~~--d~vLv~G~E~~s 168 (461)
.++|++|.+ +.+||+|+|.++
T Consensus 127 ~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 127 VNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp HHHHHSTTCCSCEEEEEEEEEEC
T ss_pred HHHHHcCCCcCCeEEEEEeeecc
Confidence 999999997 999999999875
No 76
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.82 E-value=1.7e-19 Score=219.07 Aligned_cols=264 Identities=20% Similarity=0.232 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------------ccchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------------~~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.+++.+||++||+++++++ +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 46899999999999999987765 688887654321 012367889999999 799999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||++|++.|++|++|++|++|++.+..... ..++
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~---------------------~~~~--------------- 200 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS---------------------SLQF--------------- 200 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH---------------------HHHH---------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH---------------------HHHH---------------
Confidence 9999999999999999999999999999999998765100 0000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
. +. -.+++|. .+|| ||. ||++
T Consensus 201 ---------~------~~------------------------~~ls~~g------------~c~~-Fd~~adG~~----- 223 (2512)
T 2vz8_A 201 ---------M------KL------------------------GMLSQDG------------TCRS-FDAEGTGYC----- 223 (2512)
T ss_dssp ---------H------HT------------------------TCBCTTC------------SCCS-SSTTCCCBC-----
T ss_pred ---------c------cC------------------------CCCCCCC------------CCCC-CCCCCCCcc-----
Confidence 0 00 1234443 3455 876 8998
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC------CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS------VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~------~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
.|||++++||.+.+.|. ++++.|.|++.+..... ..+.+...+++++|++||++++||||+|.|-.-+
T Consensus 224 --~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT 297 (2512)
T 2vz8_A 224 --RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT 297 (2512)
T ss_dssp --BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred --eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence 89999999999998875 58999999988764321 1233567899999999999999999999997765
Q ss_pred H----HHHH-HHHHcCCC-CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-------------C----------
Q 012522 365 S----QYVY-CIKKLGLD-PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------K---------- 414 (461)
Q Consensus 365 ~----~~~~-~~e~LGl~-~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------~---------- 414 (461)
. .+.. ..+.+|-. ..++.++.-+..+||..+|+|+..++.++..|+.+ + +
T Consensus 298 ~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 377 (2512)
T 2vz8_A 298 KVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVV 377 (2512)
T ss_dssp TTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEec
Confidence 4 2222 23344432 23455566677899999999999999999999876 1 0
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
..+++.+++++-||.+.++||+...
T Consensus 378 ~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 378 DRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp CSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 1135667777778889999998653
No 77
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.81 E-value=1.6e-19 Score=183.83 Aligned_cols=233 Identities=13% Similarity=0.086 Sum_probs=165.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|+++||++++ +++||.|++++.+++.. .+..+..++..||++..+++++++.+|++++.||..|..
T Consensus 52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 128 (388)
T 3v4n_A 52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN 128 (388)
T ss_dssp TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHH
Confidence 468999999999999999987 89999999999988775 678899999999997558999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+||+|+|.++...
T Consensus 129 ~i~sg~~~~vLVvg~e~~s~~~---------------------------------------------------------- 150 (388)
T 3v4n_A 129 HVALHPDKKVLVVAADIAKYGL---------------------------------------------------------- 150 (388)
T ss_dssp HHHHCTTCEEEEEEEEEECCCT----------------------------------------------------------
T ss_pred HHhcCCCCEEEEEEehhhcccC----------------------------------------------------------
Confidence 9999999999999999987610
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
. . ++.++ +||||+|+||...+.
T Consensus 151 ----~--------------------------------------------~-~~~~l-------fGDGA~A~ll~~~~~-- 172 (388)
T 3v4n_A 151 ----N--------------------------------------------S-GGEPT-------QGAGAVAMLVSSEPR-- 172 (388)
T ss_dssp ----T--------------------------------------------C-TTGGG-------CEEEEEEEEEEESCS--
T ss_pred ----C--------------------------------------------C-CCCCc-------cccceeEEEeecCCC--
Confidence 0 0 00012 799999999987531
Q ss_pred hcCCCeeEEEEEeeee--c----cCCCC--C----C--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH--
Q 012522 310 QKGLPILGVFRSFSAV--G----VDPSV--M----G--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY-- 367 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~--~----~~p~~--~----~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~-- 367 (461)
++......... . ..|.. + + .....+++++|+++|++++|||+|.+|++|..+.
T Consensus 173 -----il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~k 247 (388)
T 3v4n_A 173 -----ILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKK 247 (388)
T ss_dssp -----SEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHH
T ss_pred -----ceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHH
Confidence 11110000000 0 01111 0 0 1123678899999999999999999999886432
Q ss_pred ----------HHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CCCCCEEEEEecccCccee
Q 012522 368 ----------VYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GKDCRFGVISMCIGSGMGA 431 (461)
Q Consensus 368 ----------~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~~~~gl~~~~~g~G~g~ 431 (461)
....+.|+++.+++..+ .--+||...+|-...+.+++.+- ++ .+|.++.++++ |.|..+
T Consensus 248 a~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~-g~~~~Gd~ill~s~--GsG~~a 317 (388)
T 3v4n_A 248 ALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENA-TTLTAGNQIGLFSY--GSGAVA 317 (388)
T ss_dssp HHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHC-SSCCTTCEEEEEEE--ETTTEE
T ss_pred HHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhc-CcCCCCCEEEEEEe--cCccee
Confidence 23456677776654322 24579999888666565555541 11 23556666655 555444
No 78
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.80 E-value=2.7e-19 Score=183.75 Aligned_cols=97 Identities=6% Similarity=-0.039 Sum_probs=89.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|+++||++++ +++||.|++++.+++.. .+..+.+++..||++..+++++++.+|++++.||..|..
T Consensus 81 ~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 157 (425)
T 3sqz_A 81 ITDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQ-SKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKL 157 (425)
T ss_dssp TTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCS-SSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccc-cchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHH
Confidence 467899999999999999997 99999999999988766 677899999999997558999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
+|++|.++.+||+|+|.++.
T Consensus 158 ~i~sg~~~~vLVvgae~~s~ 177 (425)
T 3sqz_A 158 HVEKHPDTRVLVLASDIAKY 177 (425)
T ss_dssp HHHHSTTCEEEEEEEEEECC
T ss_pred HHHcCCCCeEEEEEEehhcc
Confidence 99999999999999999886
No 79
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.76 E-value=7.5e-18 Score=175.81 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=94.4
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHH---HcCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF---YAGFPE 126 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~---~lGl~~ 126 (461)
..++.+.+.+.+... ..+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+.+++. .+|+ .
T Consensus 53 ~~~~~~~Gi~~r~~~----~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~-~ 126 (478)
T 2p8u_A 53 GKYTIGLGQAKMGFC----TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGN-T 126 (478)
T ss_dssp TCCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTC-C
T ss_pred hHhecccCceEEEeC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCC-C
Confidence 345667777776532 24678999999999999999999999999999999988765 5778888884 4555 4
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES 166 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~--~d~vLv~G~E~ 166 (461)
.+++++++.+|++++.||..|.++|++|. .+.|||+|+|.
T Consensus 127 ~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 127 DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 68999999999999999999999999999 99999999994
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.65 E-value=4.9e-16 Score=161.78 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC--CCCCeEEeCCCCchHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~CaSgl~Al~~A 147 (461)
++++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|++ .++.+++++.+|+++..||..|
T Consensus 50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A 128 (460)
T 2wya_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA 128 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence 5789999999999999999999999999999999998877 678888898888752 3578899999999999999999
Q ss_pred HHHHHcCCCCEEEEEee
Q 012522 148 ATAIKAGLYDIGIAAGL 164 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G~ 164 (461)
.++|++|..+.++++.+
T Consensus 129 ~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 129 ANWMESSSWDGRYAMVV 145 (460)
T ss_dssp HHHHTSTTCCSCEEEEE
T ss_pred HHHHHhccccceEEEEE
Confidence 99999998876655543
No 81
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=91.73 E-value=0.39 Score=47.11 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC--------------eEEeCCCCc-hHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP--------------LRTVNRQCS-SGL 141 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~--------------~~~v~~~Ca-Sgl 141 (461)
.+.+.+++.|+++|++|+|+|.|+.|....- +..+...+..++|+|.+.. ++.=..+|+ |..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~---g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSGV---GSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHHH---HHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHHH---HHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 4456668999999999999999997542111 3345566777888864221 111224555 344
Q ss_pred HHHHHHHHHHHcCCCCEEEEEeeccc
Q 012522 142 QAVADVATAIKAGLYDIGIAAGLESM 167 (461)
Q Consensus 142 ~Al~~A~~~I~sG~~d~vLv~G~E~~ 167 (461)
..-......++.|+.+.+|++++-..
T Consensus 285 v~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 285 VTFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCcccEEEEEecccc
Confidence 44577788899999999999997653
No 82
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=91.07 E-value=0.99 Score=44.14 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||++... ..++....+..+.||+..... .-+ ..||+|...-+.+..++-+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a------~di--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPA------YDV--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCE------EEE--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceE------EEe--ecchhhHHHHHHHhhhhhh
Confidence 589999999999999999988643 234556667788999975431 112 2366665554444444443
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
.. ..+.+|+.
T Consensus 139 ~g-~~~~~Lvv 148 (350)
T 4ewp_A 139 SG-TARHVLVV 148 (350)
T ss_dssp TT-SCSEEEEE
T ss_pred CC-CccceeEe
Confidence 31 34444543
No 83
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=88.36 E-value=0.83 Score=44.71 Aligned_cols=82 Identities=15% Similarity=0.055 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHH--
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATA-- 150 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~-- 150 (461)
...++++++|+++|++++|||.++. +.. +...-..++..+|+|.+....++ |..++|-..+|..+...
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~----Hq~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 320 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVI----HQV--SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEE----CCS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe----CCC--CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence 4457778999999999999998886 221 23345667888999754432222 45555666666655544
Q ss_pred HHcCCCCEEEEEeecc
Q 012522 151 IKAGLYDIGIAAGLES 166 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~ 166 (461)
++.| |.+|++|+..
T Consensus 321 ~~~G--d~vll~~~G~ 334 (345)
T 3s21_A 321 LKKG--DRIALLGIGS 334 (345)
T ss_dssp CCTT--CEEEEEEEET
T ss_pred CCCC--CEEEEEEECh
Confidence 4444 6888877644
No 84
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=87.48 E-value=0.75 Score=45.42 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++ |..++|-..+|..+...+
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~H----q~--n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l 327 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICH----QP--NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDI 327 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEC----CS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC----CC--CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhC
Confidence 345578899999999999999988752 21 23445667888999754433332 455666677777666655
Q ss_pred HcCCCCEEEEEeec
Q 012522 152 KAGLYDIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~d~vLv~G~E 165 (461)
+.| |.+|++|+-
T Consensus 328 ~~G--d~vll~~fG 339 (359)
T 3h78_A 328 QPG--QRVLVLTYG 339 (359)
T ss_dssp CTT--CEEEEEEEE
T ss_pred CCC--CEEEEEEEc
Confidence 555 677777643
No 85
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=86.97 E-value=1.3 Score=42.49 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I~ 152 (461)
-..++++++|+++|++++|||.++.-.. +......+...+|++......+. +..++|+..+|..+ ++
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~ 283 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA------NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LK 283 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HH
Confidence 5667889999999999999998875211 22333456778898643222222 35556666666554 44
Q ss_pred cCC---CCEEEEEeec
Q 012522 153 AGL---YDIGIAAGLE 165 (461)
Q Consensus 153 sG~---~d~vLv~G~E 165 (461)
.|+ -|.+|+.++-
T Consensus 284 ~~~~~~g~~vl~~~~G 299 (313)
T 1zow_A 284 NGKLKDDDTIVLVGFG 299 (313)
T ss_dssp TTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEc
Confidence 454 3788887754
No 86
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=86.85 E-value=1.5 Score=43.22 Aligned_cols=81 Identities=10% Similarity=-0.031 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC----CCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN----RQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~----~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++. ..++|-..+|. ..+
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~H----q~--n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~---~~~ 336 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLH----QA--NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALE---TMR 336 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC----CC--CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc----CC--CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHH---HHH
Confidence 445678899999999999999988752 21 234556788899997654444443 22333333333 345
Q ss_pred HcCCC---CEEEEEeec
Q 012522 152 KAGLY---DIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~---d~vLv~G~E 165 (461)
+.|.. |.+|++|+-
T Consensus 337 ~~g~~~~Gd~vll~~fG 353 (365)
T 3gwa_A 337 ANGTLARGMRLMLLGFG 353 (365)
T ss_dssp HTTCCCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEe
Confidence 55543 678887753
No 87
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=86.84 E-value=1.2 Score=43.18 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.-. . +...-..+...+|++......++ |..++|...+|..+ +
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~----~--~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ----A--NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC----C--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC----C--CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4567889999999999999999887621 1 23344457788999643322222 34455555555544 4
Q ss_pred HcCC---CCEEEEEeecc
Q 012522 152 KAGL---YDIGIAAGLES 166 (461)
Q Consensus 152 ~sG~---~d~vLv~G~E~ 166 (461)
+.|. -|.+|++|+..
T Consensus 295 ~~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 295 RQGILRDGGNMVLTGFGA 312 (331)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEeH
Confidence 5553 36888887654
No 88
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=86.22 E-value=1.4 Score=42.60 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-Ee----CCCCchHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TV----NRQCSSGLQAVADVATA 150 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~CaSgl~Al~~A~~~ 150 (461)
+...++++++|+++|++++|||.++.-. . +......+...+|++...... ++ |..++|...+|..+...
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~----~--~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~ 305 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ----A--NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT 305 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC----S--CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----C--CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHc
Confidence 3566789999999999999999887522 1 233444577789996542221 11 34445555455444332
Q ss_pred HHcCCCCEEEEEeec
Q 012522 151 IKAGLYDIGIAAGLE 165 (461)
Q Consensus 151 I~sG~~d~vLv~G~E 165 (461)
-+...-|.+|+.++-
T Consensus 306 ~~~~~g~~~l~~~~G 320 (335)
T 1u6e_A 306 GAAKPGDLALLIGYG 320 (335)
T ss_dssp TSSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEe
Confidence 111124788887753
No 89
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=85.60 E-value=1.6 Score=42.42 Aligned_cols=82 Identities=16% Similarity=0.192 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-E---e-CCCCchHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-T---V-NRQCSSGLQAVADVATA 150 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~---v-~~~CaSgl~Al~~A~~~ 150 (461)
+...++++++|+++|++++|||.++.-. . +......+...+|++...... + + |..++|...+|..+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~---~---~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQ---A---NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECC---S---CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC---C---CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 4566789999999999999999887622 1 223344577889996541221 1 1 34455556665544
Q ss_pred HHcCC---CCEEEEEeecc
Q 012522 151 IKAGL---YDIGIAAGLES 166 (461)
Q Consensus 151 I~sG~---~d~vLv~G~E~ 166 (461)
++.|. -|.+|++++-.
T Consensus 302 ~~~g~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIGFGA 320 (339)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEch
Confidence 44443 36888877653
No 90
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=85.46 E-value=2.4 Score=41.00 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=44.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||.+.+-.. .+.......+.||+...+. ..+. -..++|+..+..+...++.
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v~-~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFA------FDIS-AACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEE------EEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceE------EEeC-cccHHHHHHHHHHHHHHHC
Confidence 47999999999999999999875432 2344566778899975321 2222 2223445555566666665
Q ss_pred c
Q 012522 412 R 412 (461)
Q Consensus 412 ~ 412 (461)
.
T Consensus 130 g 130 (321)
T 3il6_A 130 G 130 (321)
T ss_dssp S
T ss_pred C
Confidence 4
No 91
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=84.42 E-value=2.6 Score=41.83 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+.-+ ++.......+.||+....
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 47899999999999999999875432 345566778899997643
No 92
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=84.34 E-value=2 Score=40.91 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I~ 152 (461)
...++++++|+++|++++|||.++.-. . +......+...+|++......+. +..++|+..+|..+ ++
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~----~--~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~ 281 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQ----A--NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IK 281 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECC----S--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcC----C--CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HH
Confidence 456889999999999999999877522 1 22233457778998632211111 45566777666555 44
Q ss_pred cCCC---CEEEEEeec
Q 012522 153 AGLY---DIGIAAGLE 165 (461)
Q Consensus 153 sG~~---d~vLv~G~E 165 (461)
.|+. |.+|+.++-
T Consensus 282 ~g~~~~G~~~l~~~~G 297 (309)
T 2ebd_A 282 EGKVKRGDLILMTAMG 297 (309)
T ss_dssp TTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEc
Confidence 4543 788887753
No 93
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=83.26 E-value=3.4 Score=41.58 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDP 378 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~ 378 (461)
..|++++|+++|++++|||.+.+-- ..+.......+.||+..
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~ 187 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRG 187 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCC
Confidence 4799999999999999999987533 23445567788999986
No 94
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=83.22 E-value=2.5 Score=40.95 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++. +.. +...-..++..+|+|......++ |..++|-..+|..+ +
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~----Hq~--~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~ 304 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIP----HQA--NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---V 304 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE----CCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE----cCC--CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---H
Confidence 55667889999999999999998875 221 23445667888999754333333 33444444455443 4
Q ss_pred HcCCC---CEEEEEee
Q 012522 152 KAGLY---DIGIAAGL 164 (461)
Q Consensus 152 ~sG~~---d~vLv~G~ 164 (461)
+.|.. |.+|++|+
T Consensus 305 ~~g~~~~Gd~vll~~~ 320 (333)
T 4dfe_A 305 RDGRIKRGQNVLIEGV 320 (333)
T ss_dssp HTTCSCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 44442 67887764
No 95
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=82.87 E-value=2.7 Score=40.70 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|.+.-..++ |..++|-..+|..+ +
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~H----q~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~ 294 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPH----QA--NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---I 294 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEC----CS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc----CC--CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---H
Confidence 345577889999999999999988752 21 23445677889999755433333 33444444455443 4
Q ss_pred HcCCC---CEEEEEeec
Q 012522 152 KAGLY---DIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~---d~vLv~G~E 165 (461)
+.|.. |.+|.+|+-
T Consensus 295 ~~g~~~~Gd~vll~~~G 311 (323)
T 3il3_A 295 RDGRIQRGQLLLLEAFG 311 (323)
T ss_dssp HTTSSCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEe
Confidence 44432 678877653
No 96
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=82.63 E-value=1.8 Score=43.18 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE---Ee-CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR---TV-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~---~v-~~~CaSgl~Al~~A~~~I 151 (461)
+-..++++++|+++|++++|||.++.-. . +...-..+...+|++...... .+ ..|..++...+..-...+
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~H~----~--~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~ 360 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAIHP----G--GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV 360 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEECC----S--CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEECC----C--cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH
Confidence 4556788999999999999999887622 1 233445577789997543221 11 112222222222233455
Q ss_pred HcCCC----CEEEEEeecc
Q 012522 152 KAGLY----DIGIAAGLES 166 (461)
Q Consensus 152 ~sG~~----d~vLv~G~E~ 166 (461)
+.|.. |.+|++|+-.
T Consensus 361 ~~g~~~~~Gd~vll~~~G~ 379 (393)
T 1ted_A 361 QQAESAKAISTGVAFAFGP 379 (393)
T ss_dssp HSCSSSSSSEEEEEEEEET
T ss_pred hcCccCCCCCeEEEEEecc
Confidence 66654 7888877643
No 97
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=82.60 E-value=4.5 Score=38.61 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+.+-.. .+.......+.||+...+ ...+ +...++|+..+..+...++.
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~------~~~v-~~aCas~~~al~~A~~~i~~ 128 (317)
T 1hnj_A 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP------AFDV-AAACAGFTYALSVADQYVKS 128 (317)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC------EEEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe------EEee-CcccHHHHHHHHHHHHHHHC
Confidence 47899999999999999998654221 223445667788986433 1223 33345666667777777876
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..++.|+.
T Consensus 129 g--~~~~vlv~ 137 (317)
T 1hnj_A 129 G--AVKYALVV 137 (317)
T ss_dssp T--SCSEEEEE
T ss_pred C--CCCEEEEE
Confidence 6 45555544
No 98
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=82.32 E-value=3.1 Score=41.44 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+-- .++.......+.||+....
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~ 154 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTV 154 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCc
Confidence 4789999999999999999987532 2344556677899997643
No 99
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=82.27 E-value=2.4 Score=41.65 Aligned_cols=83 Identities=10% Similarity=0.055 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHH--
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVAT-- 149 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~-- 149 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++ |..++|-..+|..+..
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~H----q~--~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g 317 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLFH----QA--NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDR 317 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC----CC--CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeC----CC--CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhC
Confidence 455677889999999999999988762 21 23445668889999755433332 4555666667766543
Q ss_pred HHHcCCCCEEEEEeecc
Q 012522 150 AIKAGLYDIGIAAGLES 166 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~ 166 (461)
.++.| |.+|++|+-.
T Consensus 318 ~~~~G--d~vll~~fG~ 332 (354)
T 4efi_A 318 LKEET--LQLGMFGFGV 332 (354)
T ss_dssp HHHSC--EEEEEEEEET
T ss_pred CCCCC--CEEEEEEEch
Confidence 45666 6788777544
No 100
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=82.16 E-value=5 Score=39.88 Aligned_cols=78 Identities=13% Similarity=0.202 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-... ..........||++.. +. ..+ +...++++..+..+...++
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~------~~v-~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS------YTV-NKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE------EEc-cccchHHHHHHHHHHHHHh
Confidence 479999999999999999998754321 2234456677898642 21 111 3445677777888888888
Q ss_pred ccCCCCCEEEEEe
Q 012522 411 RRGKDCRFGVISM 423 (461)
Q Consensus 411 ~~~~~~~~gl~~~ 423 (461)
.. ..++.|+..
T Consensus 107 ~G--~~~~vlv~g 117 (395)
T 4e1l_A 107 SG--ENDVVIAGG 117 (395)
T ss_dssp TT--SCSEEEEEE
T ss_pred CC--CCCEEEEEE
Confidence 76 677777653
No 101
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=81.57 E-value=3.5 Score=40.92 Aligned_cols=76 Identities=14% Similarity=0.065 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+.. .++.......+.||+.... ... + +...++|+..+..+...++
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~~~~~al~~A~~~i~ 179 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM------Y-QQGAFAGGTVLRLAKDLAE 179 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCCchhhee------E-CCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999987532 2344556777889997531 111 1 1122344555656666666
Q ss_pred ccCCCCCEEEE
Q 012522 411 RRGKDCRFGVI 421 (461)
Q Consensus 411 ~~~~~~~~gl~ 421 (461)
.. ..+++|+
T Consensus 180 ~g--~~~~vLv 188 (389)
T 1i88_A 180 NN--KGARVLV 188 (389)
T ss_dssp TS--TTCEEEE
T ss_pred cC--CCCEEEE
Confidence 55 3444443
No 102
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=81.01 E-value=4 Score=41.71 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+.-+ ++.......+.||+....
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~ 162 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 162 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCe
Confidence 47899999999999999999975432 445566778899997643
No 103
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=80.94 E-value=4.5 Score=40.36 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=44.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+.. .++.......+.||+.... ... + +-..++|+..+..+...++
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 192 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPTVKRVML------Y-QQGAYAGATVLRVAKDLAE 192 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEE------E-SCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCccceeeE------E-CCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999886532 2344556677889997631 111 1 1122345555556666666
Q ss_pred cc
Q 012522 411 RR 412 (461)
Q Consensus 411 ~~ 412 (461)
..
T Consensus 193 sg 194 (402)
T 3awk_A 193 NN 194 (402)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 104
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=80.80 E-value=3.6 Score=40.84 Aligned_cols=76 Identities=17% Similarity=0.056 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+... ++.......+.||+...- ... + +...++|+..+..+...++
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMF------Y-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeee------E-ccccHHHHHHHHHHHHHHH
Confidence 47899999999999999998875422 333456677889997531 111 1 1112344555555556666
Q ss_pred ccCCCCCEEEE
Q 012522 411 RRGKDCRFGVI 421 (461)
Q Consensus 411 ~~~~~~~~gl~ 421 (461)
.. ..+++|+
T Consensus 176 ~g--~~~~vLv 184 (387)
T 3a5r_A 176 NN--KGARVLI 184 (387)
T ss_dssp HS--TTCEEEE
T ss_pred hC--CCCEEEE
Confidence 54 3444443
No 105
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=80.61 E-value=3.6 Score=41.27 Aligned_cols=43 Identities=23% Similarity=0.244 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++.+.. .++.......+.||++..
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 4789999999999999999987543 234455677788999753
No 106
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=80.52 E-value=3.4 Score=41.24 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC--CcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPE--KVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~--~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++..... ++.......+.||+... +... + +...++|+..+..+...++
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aCss~~~al~~A~~~i~ 184 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYML------Y-QQGAAAGGTVLRLAKDLAE 184 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTTCEEEEE------C-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCCcceeeE------E-CchhHHHHHHHHHHHHHHH
Confidence 47899999999999999999875432 33345667788999753 1111 1 1122344555555556666
Q ss_pred cc
Q 012522 411 RR 412 (461)
Q Consensus 411 ~~ 412 (461)
..
T Consensus 185 ~g 186 (402)
T 1ee0_A 185 NN 186 (402)
T ss_dssp HS
T ss_pred cC
Confidence 54
No 107
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=79.93 E-value=4.5 Score=40.19 Aligned_cols=43 Identities=23% Similarity=0.252 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++.+-.. ++.......+.||+...
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~ 147 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPS 147 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCC
Confidence 47899999999999999999875422 33445667788999764
No 108
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=79.83 E-value=6.5 Score=39.07 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-... ..........||++. .+. ..+ +...++++..+..+...++
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~------~~v-~~aCss~~~al~~A~~~I~ 108 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPA------MTI-NIVCGSGLRSVSMASQLIA 108 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceE------EEe-ccccHHHHHHHHHHHHHHh
Confidence 589999999999999999998764321 223445667889974 221 112 3345667777888888888
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 109 ~G--~~~~vLv~ 118 (396)
T 4dd5_A 109 LG--DADIMLVG 118 (396)
T ss_dssp HT--SCSEEEEE
T ss_pred cC--CCCEEEEE
Confidence 76 67777764
No 109
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=79.75 E-value=5.7 Score=39.18 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+..... ++.......+.||+... +. ..+.....++|+..+..+...++.
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~------~~v~~~aCss~~~Al~~A~~~i~~ 162 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQ------IPIAQLGCAAGGAAINRAHDFCTA 162 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEE------EEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcce------EEccCCcCHHHHHHHHHHHHHHHc
Confidence 47899999999999999999875322 33345567788998752 21 111122234555566666677776
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..+++|+.
T Consensus 163 g--~~~~vLv~ 171 (382)
T 1u0m_A 163 Y--PEANALIV 171 (382)
T ss_dssp S--TTCEEEEE
T ss_pred C--CCCEEEEE
Confidence 5 44554443
No 110
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=79.56 E-value=3.5 Score=41.13 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHH-HHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE-----AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATG-ARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe-----afa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG-~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+-. .++.......+.||+. .+ ++.--.+|+| +..+..+...++
T Consensus 122 ~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~--------~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 122 VTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GF--------AFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SE--------EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-Ce--------EEEECCccHHHHHHHHHHHHHHH
Confidence 5799999999999999999987532 2334455667889983 11 2222234444 444555555555
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..+++|+.
T Consensus 193 ~g--~~~~vLvv 202 (392)
T 3led_A 193 GG--SVDAVLMV 202 (392)
T ss_dssp TT--SCSEEEEE
T ss_pred CC--CCCEEEEE
Confidence 54 34554443
No 111
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=79.55 E-value=1.6 Score=40.35 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCC
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR 135 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 135 (461)
...+....+++++|+++|++++|||.|.++.--+.+. +-.++...+..+.+..+.|.+.|++
T Consensus 33 ~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsft-glRig~~~ak~la~~~~~Pl~~V~~ 94 (231)
T 2gel_A 33 EHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFT-GVRIGIGIAQGLALGANLPMIGVST 94 (231)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHH-HHHHHHHHHHHHHHTTTCCEEEECH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhH-hHHHHHHHHHHHHHHcCCCEEEecc
Confidence 3356677899999999999999999999976433222 3222222222222222467777754
No 112
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=78.97 E-value=3.8 Score=41.13 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=43.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+-.. ++.......+.||+...- .. .+ +...++|+..+..+...++
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~------~v-~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVG------VF-QHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEE------EE-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhc------ee-cCccHHHHHHHHHHHHHHH
Confidence 47899999999999999998874322 333455677889997531 11 11 1122344555555656666
Q ss_pred cc
Q 012522 411 RR 412 (461)
Q Consensus 411 ~~ 412 (461)
..
T Consensus 203 ~G 204 (413)
T 1xes_A 203 NN 204 (413)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 113
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=78.74 E-value=6 Score=38.78 Aligned_cols=68 Identities=13% Similarity=0.050 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhH-HHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA------FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT-GARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea------fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gat-G~~~~~~~~~~L 409 (461)
..|++++|+++|++++|||++.+-.. +........+.||+...+. ..+ ..+|+ |+..+..+...+
T Consensus 59 ~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~------~~v--~~aC~~~~~al~~A~~~i 130 (357)
T 3s3l_A 59 ARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPA------FGL--AQRCNGGMGAIELAGAYL 130 (357)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSCE------EEE--ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCcE------EEE--cCccHHHHHHHHHHHHHH
Confidence 57999999999999999999975432 1123455667889853321 112 23444 444455555556
Q ss_pred Hcc
Q 012522 410 KRR 412 (461)
Q Consensus 410 ~~~ 412 (461)
+..
T Consensus 131 ~sg 133 (357)
T 3s3l_A 131 GSG 133 (357)
T ss_dssp HTT
T ss_pred HcC
Confidence 554
No 114
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=78.53 E-value=4.5 Score=40.41 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++..... ++.......+.||+.... .. .+ +...++|+..+..+...++
T Consensus 120 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~------~v-~~aC~s~~~al~~A~~~i~ 192 (406)
T 2d3m_A 120 TEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYC------IY-MQGAYAGGTVMRYAKDLAE 192 (406)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEE------EE-SCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCCcceee------eE-cCccHHHHHHHHHHHHHHH
Confidence 47899999999999999999875432 333456677889997531 11 11 1122345555555666666
Q ss_pred cc
Q 012522 411 RR 412 (461)
Q Consensus 411 ~~ 412 (461)
..
T Consensus 193 ~g 194 (406)
T 2d3m_A 193 NN 194 (406)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 115
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=77.79 E-value=6.3 Score=39.13 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-... ..........+|++. .+. .. =+...++++..+..+...++
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~------~~-v~~aCss~~~al~~A~~~I~ 106 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTG------YT-IQRQCSSGMQAIMSAAMQIQ 106 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEE------EE-EECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceE------EE-ecCcchHHHHHHHHHHHHHh
Confidence 479999999999999999998754322 123345567789874 221 11 13345667777778888888
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 107 ~G--~~~~vlv~ 116 (394)
T 3ss6_A 107 LG--VSEVVVAG 116 (394)
T ss_dssp HT--SCSEEEEE
T ss_pred CC--CCCEEEEE
Confidence 76 67777764
No 116
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=77.70 E-value=6.1 Score=38.73 Aligned_cols=78 Identities=21% Similarity=0.081 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+.+-. .++.......+.||+... +. ..+.....++|+..+..+...++.
T Consensus 100 ~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~------~~v~~~aCss~~~al~~A~~~i~~ 173 (374)
T 2h84_A 100 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVER------VSLNLMGCLAGLSSLRTAASLAKA 173 (374)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEE------EEEESCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCce------EEecCCcCHHHHHHHHHHHHHHHc
Confidence 4789999999999999999987432 233344566788998752 21 111112234455556666666665
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..+++|+.
T Consensus 174 g--~~~~vLv~ 182 (374)
T 2h84_A 174 S--PRNRILVV 182 (374)
T ss_dssp C--TTCEEEEE
T ss_pred C--CCCEEEEE
Confidence 5 44555443
No 117
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=77.54 E-value=1.6 Score=39.76 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccch----HHHHHHHHcCCCCCCCeEEeCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAM----ECRMAAFYAGFPETVPLRTVNR 135 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~----~a~~ia~~lGl~~~~~~~~v~~ 135 (461)
..+.....++++|+++|++++|||.|.++.-.+.+. +-. .++-++..++ .|.+.|++
T Consensus 35 Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfT-glRig~~~AkgLa~~~~----iPl~gVst 95 (213)
T 3r6m_A 35 HTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFT-GVRIGIGIAQGLAFGAE----LPMIGVST 95 (213)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHH-HHHHHHHHHHHHHHHTT----CCEEEEEH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchh-hHHHHHHHHHHHHHHhC----CCEEEEcC
Confidence 345666899999999999999999999987543332 322 3444454444 56777743
No 118
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=77.20 E-value=8.5 Score=39.01 Aligned_cols=77 Identities=10% Similarity=0.143 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCC---CCCCcCCCCCcccccCchhhHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE-----AFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSE 408 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe-----afa~~~~~~~e~LGl---~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~ 408 (461)
..|++++|+++|++++|||++.+.- .+........+.||+ ...+ ...+. -.-++|+..+..+...
T Consensus 57 ~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~------~~~v~-~aC~gg~~AL~~A~~~ 129 (450)
T 2f82_A 57 FNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVE------GVDST-NACYGGTAALLNCVNW 129 (450)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCB------CCEEC-SGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCce------EEEhh-hhhHHHHHHHHHHHHH
Confidence 5789999999999999999998532 234455566777887 2221 12222 1223455556666666
Q ss_pred HHccCCCC--CEEEEE
Q 012522 409 MKRRGKDC--RFGVIS 422 (461)
Q Consensus 409 L~~~~~~~--~~gl~~ 422 (461)
++.. .. +++|+.
T Consensus 130 I~sg--~~~~~~vLVv 143 (450)
T 2f82_A 130 VESN--SWDGRYGLVI 143 (450)
T ss_dssp HHST--TCCSCEEEEE
T ss_pred HHcC--CCcCCeEEEE
Confidence 6654 22 555544
No 119
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=77.14 E-value=7.2 Score=37.21 Aligned_cols=76 Identities=8% Similarity=0.006 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+.+-.. ++.......+.||+ ..+. ..+ +...++|+..+..+...++.
T Consensus 55 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~~------~~v-~~aCas~~~al~~A~~~i~~ 126 (322)
T 1ub7_A 55 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFA------YDL-LAGCPGWIYALAQAHALVEA 126 (322)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEE------EEE-ECSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCEE------Eee-CccchHHHHHHHHHHHHHHc
Confidence 47899999999999999997654321 22244566778898 3331 222 12235566667777777876
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..++.|+.
T Consensus 127 g--~~~~vlv~ 135 (322)
T 1ub7_A 127 G--LAQKVLAV 135 (322)
T ss_dssp T--SCSEEEEE
T ss_pred C--CCCEEEEE
Confidence 6 45665554
No 120
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=76.90 E-value=4.9 Score=44.90 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEE-------eCCCCchHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-------VNRQCSSGLQAVADVA 148 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-------v~~~CaSgl~Al~~A~ 148 (461)
+.+.++++++|+++|++++|||.++. +.. +...-..+...+|+|...-..+ =|..++|-..+|..+.
T Consensus 864 ~~~~~~~~~al~~agl~~~did~~~~----Hq~--~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 864 ENVEKCLTQAFDPLGISDWNSLFWIA----HPG--GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEE----CCS--CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCcccceEEE----CCC--ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 34667889999999999999998764 221 2334556778899976543322 2566777788888888
Q ss_pred HHHHcCCC-------CEEEEEee
Q 012522 149 TAIKAGLY-------DIGIAAGL 164 (461)
Q Consensus 149 ~~I~sG~~-------d~vLv~G~ 164 (461)
..++.|+. |.+|.+|+
T Consensus 938 ~~~~~G~~v~~g~~~~~~ll~~~ 960 (979)
T 3tsy_A 938 KKSLKGERATTGEGLDWGVLFGF 960 (979)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEE
T ss_pred hhhcccccccCCCCcceeEEEEe
Confidence 88887753 55576664
No 121
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=75.79 E-value=1.6 Score=39.89 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccch----HHHHHHHHcCCCCCCCeEEeCC
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAM----ECRMAAFYAGFPETVPLRTVNR 135 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~----~a~~ia~~lGl~~~~~~~~v~~ 135 (461)
.-.+.+...++++|+++|++++|||.|.++.--+.+. +-- .++-++..+ +.|.+.|++
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfT-GlRiG~~~Ak~La~~~----~iPl~gVs~ 105 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLT-GLRVGIATVVGLVSPY----DIPVAPLNS 105 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHH-HHHHHHHHHHHHHGGG----TCCEEEECH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchH-hHHHHHHHHHHHHHHc----CCCEEEeCc
Confidence 3456777889999999999999999999977533322 322 333344334 457777743
No 122
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=75.16 E-value=13 Score=38.37 Aligned_cols=81 Identities=6% Similarity=0.048 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeC--------CCCchHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVN--------RQCSSGLQAVADV 147 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~--------~~CaSgl~Al~~A 147 (461)
-...+++++|+++|++++|||.+=+= +.+ +.........||++...+ -..++ ...++|+..|..+
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~----dAF--~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~ 391 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLY----SCF--PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEA 391 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEC----CSS--SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEe----CCc--HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHH
Confidence 35678999999999999999977652 322 333445566788843211 11221 3467899999999
Q ss_pred HHHHHcCCCCEEEEEe
Q 012522 148 ATAIKAGLYDIGIAAG 163 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G 163 (461)
...++.+..+..|+.+
T Consensus 392 v~~lr~~~~~~~L~~~ 407 (520)
T 4egv_A 392 VNEMRDKPGQFALVGA 407 (520)
T ss_dssp HHHHHHSTTCEEEEEE
T ss_pred HHHHhcCCCCceEEeC
Confidence 9999998889999864
No 123
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=74.05 E-value=9.1 Score=39.18 Aligned_cols=24 Identities=17% Similarity=0.277 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih 360 (461)
..|++++|+++|++++|||++.+.
T Consensus 78 ~~Aa~~aL~~agi~~~dId~li~~ 101 (478)
T 2p8u_A 78 MTVVQNLMERNNLSYDCIGRLEVG 101 (478)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE
Confidence 589999999999999999999754
No 124
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=72.69 E-value=13 Score=36.67 Aligned_cols=77 Identities=6% Similarity=-0.014 Sum_probs=51.1
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCC------ChHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSA-GLQIDDINLFEINEA------FASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSE 408 (461)
Q Consensus 337 ~~ai~~aL~~A-Gl~~~DID~~eihea------fa~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~ 408 (461)
..+++++|+++ |++++|||.+.+-.. ...........+|++. .+. ..+ +...++++..+..+...
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~------~~v-~~aCss~l~Al~~A~~~ 104 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPA------VTV-NRLCGSSMQALHDAARM 104 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCC------EEE-ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcE------eEe-cCcchHHHHHHHHHHHH
Confidence 47899999999 999999998865321 1223334556788863 221 111 33446777778888888
Q ss_pred HHccCCCCCEEEEE
Q 012522 409 MKRRGKDCRFGVIS 422 (461)
Q Consensus 409 L~~~~~~~~~gl~~ 422 (461)
++.. ..++.|+.
T Consensus 105 I~sG--~~d~vLv~ 116 (387)
T 3goa_A 105 IMTG--DAQVCLVG 116 (387)
T ss_dssp HHTT--SCSEEEEE
T ss_pred HhCC--CCCEEEEE
Confidence 8876 67777764
No 125
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=70.75 E-value=7 Score=39.85 Aligned_cols=41 Identities=7% Similarity=0.096 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLD 377 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~ 377 (461)
..|++++|+++|++++|||++.+- +.++....+..+.||+.
T Consensus 59 ~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~ 104 (460)
T 2v4w_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDS 104 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCC
Confidence 579999999999999999999753 23445566677889883
No 126
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=70.60 E-value=7.8 Score=38.73 Aligned_cols=75 Identities=11% Similarity=0.116 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCC--------CCchHHHHHHHHHHH
Q 012522 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR--------QCSSGLQAVADVATA 150 (461)
Q Consensus 79 ~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~--------~CaSgl~Al~~A~~~ 150 (461)
..+++++|+++|++++|||.+-+ .+.+ ..........+|++.. + +.++. ..++|+..+..+...
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~----hdaf--~~~~l~~~~~lg~~~~-~-vn~~Gg~~~~GHp~gasG~~~~~~~~~~ 379 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFEL----NEAF--ASVVLKFQKDLNIPDE-K-LNVNGGAIAMGHPLGATGAMITGTMVDE 379 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEE----CCSB--HHHHHHHHHHHTCCGG-G-BSTTCCHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE----eChh--HHHHHHHHHHhCCCCC-C-CCCCCcHhheeCcHHHHHHHHHHHHHHH
Confidence 47899999999999999998875 2322 1222334567888432 2 22222 246778888888888
Q ss_pred HHcCCCCEEEE
Q 012522 151 IKAGLYDIGIA 161 (461)
Q Consensus 151 I~sG~~d~vLv 161 (461)
++....++.|+
T Consensus 380 L~~~~~~~gl~ 390 (407)
T 3svk_A 380 LERRNARRALI 390 (407)
T ss_dssp HHHHTCCEEEE
T ss_pred HHhcCCCEEEE
Confidence 87655666665
No 127
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=69.26 E-value=14 Score=36.66 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------ChHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA------FASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea------fa~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++|++++|||.+.+-.. ...........||++. .+. ..+ +...++|+..+..+...+
T Consensus 31 ~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~------~~v-~~aCas~~~Al~~A~~~I 103 (401)
T 1ulq_A 31 AHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG------CTV-NRLCGSGLEAVAQAARAI 103 (401)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE------EEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccE------eec-cccchHHHHHHHHHHHHH
Confidence 47899999999999999998765321 2334455667889863 221 112 334567777788888888
Q ss_pred HccCCCCCEEEEE
Q 012522 410 KRRGKDCRFGVIS 422 (461)
Q Consensus 410 ~~~~~~~~~gl~~ 422 (461)
+.. ..++.|+.
T Consensus 104 ~~G--~~d~vLv~ 114 (401)
T 1ulq_A 104 WAG--EGKVYIGS 114 (401)
T ss_dssp HTT--SCSEEEEE
T ss_pred HCC--CCCEEEEE
Confidence 876 56766654
No 128
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=66.29 E-value=18 Score=36.07 Aligned_cols=77 Identities=10% Similarity=0.157 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-..+ ..........+|++. .+ ...+ +...++|+..+..+...++
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p------~~~v-~~aCss~~~Al~~A~~~I~ 132 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP------LSTV-NRQCSSGLQAVASIAGGIR 132 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC------EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce------EEEe-CCCCHHHHHHHHHHHHHHH
Confidence 478999999999999999977654322 122333446788852 22 1222 3345677878888888888
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 133 ~G--~~d~vLv~ 142 (418)
T 2iik_A 133 NG--SYDIGMAC 142 (418)
T ss_dssp TT--SCSEEEEE
T ss_pred CC--CCCEEEEe
Confidence 77 66776664
No 129
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=65.39 E-value=19 Score=36.38 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh------HHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFA------SQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa------~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++|++++|||.+.+-..+. .........||++. .+. ..+ +...++|+..+..+...+
T Consensus 60 ~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~------~~v-~~aCaSg~~Al~~A~~~I 132 (442)
T 2wu9_A 60 APVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAV------RTV-NRQCSSGLQAVADVAAAI 132 (442)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCE------EEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceE------EEe-CCcCHHHHHHHHHHHHHH
Confidence 4789999999999999999776543322 22334556788853 221 112 333467788888888888
Q ss_pred HccCCCCCEEEEE
Q 012522 410 KRRGKDCRFGVIS 422 (461)
Q Consensus 410 ~~~~~~~~~gl~~ 422 (461)
+.. ..++.|+.
T Consensus 133 ~sG--~~d~vLvg 143 (442)
T 2wu9_A 133 KAG--FYDIGIGA 143 (442)
T ss_dssp HTT--SCSEEEEE
T ss_pred HCC--CCCEEEEE
Confidence 876 66776664
No 130
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=64.97 E-value=22 Score=35.06 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=52.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-..+ ..........+|++. .+ ...+ ....+||+..+..+...++
T Consensus 35 ~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p------~~~v-~~aCaSg~~Ai~~A~~~I~ 107 (397)
T 1wl4_A 35 STVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP------AWSC-QMICGSGLKAVCLAVQSIG 107 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC------EEEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc------EEEe-cCcChhHHHHHHHHHHHHH
Confidence 478999999999999999987653222 123334566788852 22 1222 2345788888889999998
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 108 ~G--~~d~vlag 117 (397)
T 1wl4_A 108 IG--DSSIVVAG 117 (397)
T ss_dssp TT--SCSEEEEE
T ss_pred CC--CCCEEEEE
Confidence 77 67776664
No 131
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=63.22 E-value=16 Score=36.59 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCCCCCeEEeC--------CCCchHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN--------RQCSSGLQAVAD 146 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~--------~~CaSgl~Al~~ 146 (461)
+-...++++||+++|++|+|||.+.. |+.+ . . .......+...+|.+. .++ .++ ..+++|+..+..
T Consensus 293 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~-~-d~~e~~al~~~~g~~~-~~~-~v~s~k~~~GH~~gAsG~~~~i~ 367 (428)
T 3kzu_A 293 EGAQRCMVAALKRAGIVPDEIDYINAHGTST-M-A-DTIELGAVERVVGEAA-AKI-SMSSTKSSIGHLLGAAGAAEAVF 367 (428)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-T-T-HHHHHHHHHHHHGGGG-GGC-EEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-h-h-hHHHHHHHHHHhccCC-Cce-eeCCchhhhCCCchhhHHHHHHH
Confidence 34568899999999999999998863 2222 1 1 1122233444455531 121 222 336789999999
Q ss_pred HHHHHHcCC
Q 012522 147 VATAIKAGL 155 (461)
Q Consensus 147 A~~~I~sG~ 155 (461)
+...++.|.
T Consensus 368 ~~~~l~~~~ 376 (428)
T 3kzu_A 368 STLAIRDNI 376 (428)
T ss_dssp HHHHHHHTE
T ss_pred HHHHhccCc
Confidence 999998874
No 132
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=62.18 E-value=18 Score=35.70 Aligned_cols=77 Identities=19% Similarity=0.272 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-..+ ..........+|+.. .+. ..+ +...+||+..+..+...++
T Consensus 32 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~------~~v-~~aCaSgl~Al~~A~~~I~ 104 (392)
T 2vu1_A 32 ATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA------WGM-NQLCGSGLRAVALGMQQIA 104 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceE------EEe-cccchHHHHHHHHHHHHHH
Confidence 478999999999999999987653221 123345567788864 221 111 3345678888888888898
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 105 ~G--~~d~vlvg 114 (392)
T 2vu1_A 105 TG--DASIIVAG 114 (392)
T ss_dssp TT--SCSCEEEE
T ss_pred CC--CCCEEEEE
Confidence 77 56666654
No 133
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=62.18 E-value=18 Score=36.74 Aligned_cols=41 Identities=7% Similarity=0.096 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLD 377 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~ 377 (461)
..|++++|+++|++++|||++.+- +.+........+.||+.
T Consensus 59 ~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~ 104 (460)
T 2wya_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDS 104 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhcc
Confidence 589999999999999999998742 45555666666777653
No 134
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=61.95 E-value=7.1 Score=39.19 Aligned_cols=78 Identities=14% Similarity=0.157 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCCC-CCeEE----e-CCCCchHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPET-VPLRT----V-NRQCSSGLQAVADVA 148 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~~-~~~~~----v-~~~CaSgl~Al~~A~ 148 (461)
+-...++++||+++|++++|||.|.. |+.++... ......+...+|.+.. .++.. + ...++||+..+..+.
T Consensus 292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d--~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~ 369 (427)
T 3ho9_A 292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD--KAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSI 369 (427)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH--HHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcC--HHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHH
Confidence 34568899999999999999998874 22221110 1223334445554211 11111 1 244689999999999
Q ss_pred HHHHcCC
Q 012522 149 TAIKAGL 155 (461)
Q Consensus 149 ~~I~sG~ 155 (461)
..++.|.
T Consensus 370 ~~l~~~~ 376 (427)
T 3ho9_A 370 LALRDQA 376 (427)
T ss_dssp HHHHHTE
T ss_pred HHHhcCC
Confidence 9999875
No 135
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=58.72 E-value=8.9 Score=38.13 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCc-c-chHHHHHHHHcCCCC-CCCeEE----e-CCCCchHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-R-AMECRMAAFYAGFPE-TVPLRT----V-NRQCSSGLQAVADV 147 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~-~-~~~a~~ia~~lGl~~-~~~~~~----v-~~~CaSgl~Al~~A 147 (461)
+-...++++||+++|++|+|||.+..= +.+.. + +.....+...+|.+. ..+... + ...+++|...+..+
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~H---gtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~ 351 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAH---GTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIAT 351 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECC---CCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe---CCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHH
Confidence 445678999999999999999987641 11110 0 111233444455421 122111 1 24467899999999
Q ss_pred HHHHHcCC
Q 012522 148 ATAIKAGL 155 (461)
Q Consensus 148 ~~~I~sG~ 155 (461)
...++.|.
T Consensus 352 ~l~l~~~~ 359 (408)
T 1j3n_A 352 VQALYHGV 359 (408)
T ss_dssp HHHHHHTE
T ss_pred HHHHhcCC
Confidence 99999873
No 136
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=58.31 E-value=7.8 Score=37.50 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc----chHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR----AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~----~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+.+..+++++|+++|++++|||.|.++.- |....+ ...++.++..++ .|.+.|+. +.+...++..
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~G-PG~~~~lrvg~~~ak~la~~~~----~pl~~v~h-----~~aHa~~a~~- 117 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQG-PGLGPALRVVATAARALAVKYR----KPIVGVNH-----CIAHVEITKM- 117 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEE-SSCHHHHHHHHHHHHHHHHHTT----CCEEEEEH-----HHHHHHGGGG-
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECC-CCchHHHHHHHHHHHHHHHHcC----CCEEeeCc-----HHHHHHHHhh-
Confidence 56678999999999999999999987643 222101 123444444443 46666654 3333333323
Q ss_pred HcCC-CCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHH
Q 012522 152 KAGL-YDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ 211 (461)
Q Consensus 152 ~sG~-~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre 211 (461)
++. .-.+|++..- -+..-......+ . ..+......+|..-+.++...|+...
T Consensus 118 -~~~~~~~~l~v~GG-~t~~i~~~~~~~----~--~lg~t~dds~Gr~fD~vA~~LGl~~~ 170 (330)
T 2ivn_A 118 -FGVKDPVGLYVSGG-NTQVLALEGGRY----R--VFGETLDIGIGNAIDVFARELGLGFP 170 (330)
T ss_dssp -GTCCSCEEEEECSS-CEEEEEEETTEE----E--EEEEBSSSCHHHHHHHHHHHHTCCSC
T ss_pred -cCCCCCeEEEEcCC-CceEEEEcCCeE----E--EEEeecCchhHHHHHHHHHHhCCCCC
Confidence 442 2244444321 111100000000 0 00111223678888888888888754
No 137
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=58.23 E-value=30 Score=34.01 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-... ....-.....+|++. .+. ..+ +...++|+..+..+...++
T Consensus 37 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~------~~v-~~aCaS~~~Al~~A~~~I~ 109 (395)
T 2ib8_A 37 SIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPC------TTI-NKVCASGMKAIMMASQSLM 109 (395)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceE------EEe-cccccHHHHHHHHHHHHHH
Confidence 478999999999999999987643211 112334456688852 221 112 2345678888888888998
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 110 ~G--~~d~vlvg 119 (395)
T 2ib8_A 110 CG--HQDVMVAG 119 (395)
T ss_dssp TT--SCSEEEEE
T ss_pred CC--CCCEEEEE
Confidence 77 67776664
No 138
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=56.51 E-value=29 Score=34.19 Aligned_cols=78 Identities=8% Similarity=-0.033 Sum_probs=51.2
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCCC------hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSA-GLQIDDINLFEINEAF------ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~A-Gl~~~DID~~eiheaf------a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++ |++++|||.+.+-... ..........+|++.... ...+ ....+||+..+..+...+
T Consensus 35 ~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p-----~~~v-~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 35 AHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-----AQTV-SRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-----EEEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCcc-----EEEE-cccchhHHHHHHHHHHHH
Confidence 47899999999 9999999877653221 123334555677753211 1222 344577888888888889
Q ss_pred HccCCCCCEEEEE
Q 012522 410 KRRGKDCRFGVIS 422 (461)
Q Consensus 410 ~~~~~~~~~gl~~ 422 (461)
+.. ..++.|+.
T Consensus 109 ~~G--~~d~vlvg 119 (390)
T 1wdk_C 109 MTG--NGDVFVVG 119 (390)
T ss_dssp HTT--SCSEEEEE
T ss_pred HcC--CCCEEEEe
Confidence 877 66776664
No 139
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=55.80 E-value=40 Score=33.24 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=51.2
Q ss_pred HHHHHHHHHHcC----CCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAG----LQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLL 406 (461)
Q Consensus 337 ~~ai~~aL~~AG----l~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~ 406 (461)
..+++++|+++| ++++|||.+.+-... ..........||++. .+. ..+ +...++|+..+..+.
T Consensus 40 ~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~------~~v-~~aCasg~~Al~~A~ 112 (393)
T 1afw_A 40 YNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPF------VAL-NRQCSSGLTAVNDIA 112 (393)
T ss_dssp HHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCE------EEE-ECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceE------EEE-cCcCHHHHHHHHHHH
Confidence 478999999999 999999977653221 223345566789853 231 112 233467787888888
Q ss_pred HHHHccCCCCCEEEEE
Q 012522 407 SEMKRRGKDCRFGVIS 422 (461)
Q Consensus 407 ~~L~~~~~~~~~gl~~ 422 (461)
..++.. ..++.|+.
T Consensus 113 ~~I~~G--~~d~vLv~ 126 (393)
T 1afw_A 113 NKIKVG--QIDIGLAL 126 (393)
T ss_dssp HHHHTT--SCSEEEEE
T ss_pred HHHHCC--CCCEEEEE
Confidence 888876 66776664
No 140
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=54.22 E-value=6.6 Score=38.19 Aligned_cols=55 Identities=18% Similarity=0.293 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc----chHHHHHHHHcCCCCCCCeEEeC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR----AMECRMAAFYAGFPETVPLRTVN 134 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~----~~~a~~ia~~lGl~~~~~~~~v~ 134 (461)
.+....+++++|+++|++++|||.|.++.- |....+ ...++.++..++ .|.+.|+
T Consensus 53 ~~~l~~~i~~~L~~ag~~~~did~Iav~~g-PG~~t~lrvg~~~ak~La~~~~----~Pl~~v~ 111 (334)
T 3eno_A 53 SEVIDTVISRALEKAKISIHDIDLIGFSMG-PGLAPSLRVTATAARTISVLTG----KPIIGVN 111 (334)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECS-SSCHHHHHHHHHHHHHHHHHHT----CCCEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcC-CCCcchHHHHHHHHHHHhhccC----CCeEEec
Confidence 456789999999999999999999998653 222211 123444454554 4666664
No 141
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=51.79 E-value=14 Score=36.69 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=55.8
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
..|.|.+.+--++. +...+ .+-..+++++||+++|++++|||.|.. |+.++.. .......+...+|- ..+
T Consensus 259 a~i~g~~~~~dg~~----~~~p~-~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~--D~~E~~al~~~~~~--~~~ 329 (412)
T 4ewg_A 259 AEIVGFGCNSDGAH----MTQPT-ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG--DVAESQATARTFGE--RMP 329 (412)
T ss_dssp EEEEEEEEEECSSC----SSSCC-HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH--HHHHHHHHHHHHCT--TCE
T ss_pred EEEEEEEEcCCCCC----CCCCC-HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc--cHHHHHHHHHHcCC--CCe
Confidence 45677665543321 11222 456778999999999999999998764 2211110 01222333344442 223
Q ss_pred eEEe-----CCCCchHHHHHHHHHHHHHcCC
Q 012522 130 LRTV-----NRQCSSGLQAVADVATAIKAGL 155 (461)
Q Consensus 130 ~~~v-----~~~CaSgl~Al~~A~~~I~sG~ 155 (461)
+..+ ....++|...+..+...++.|.
T Consensus 330 v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ 360 (412)
T 4ewg_A 330 ISSLKSYVGHTLGACGALEAWWTIEMMKRNW 360 (412)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eeCccccccccHHHHHHHHHHHHHHHHhcCC
Confidence 2221 1346788888888999998774
No 142
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=50.63 E-value=41 Score=28.31 Aligned_cols=61 Identities=13% Similarity=0.093 Sum_probs=39.8
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~ 125 (461)
+.+++|.|- | ++.+.. ...++++++|++.|+++..|+.+..-..--+ .+ .-..++..+|+|
T Consensus 10 ~~lvvGIGc----r------rg~~~~-~i~~ai~~aL~~~~l~~~~v~~latid~K~d---E~-gL~~~A~~lg~p 70 (145)
T 2w6k_A 10 SLLIAGIGC----R------RGCSAE-HLRALLERTLGEHGRSLAELDALASIDGKRD---EP-GLRQLATLLERP 70 (145)
T ss_dssp CCEEEEEEE----C------TTCCHH-HHHHHHHHHHHHTTCCGGGCCEEEEECSSSC---CH-HHHHHHHHHTSC
T ss_pred CeEEEEEee----C------CCCCHH-HHHHHHHHHHHHcCCCHHHcceEechHHhCC---CH-HHHHHHHHhCCC
Confidence 347888872 2 244444 4668999999999999999998875433211 11 223466788874
No 143
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=47.97 E-value=88 Score=31.14 Aligned_cols=77 Identities=22% Similarity=0.138 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCCCCcc----EEEecCCCh-------------------------------HHHHHHHHHcCCCCCCc
Q 012522 337 AVAIPAAVKSAGLQIDDIN----LFEINEAFA-------------------------------SQYVYCIKKLGLDPEKV 381 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID----~~eiheafa-------------------------------~~~~~~~e~LGl~~~~v 381 (461)
..+++++|+++|++++||| -+.+.-... ...-.....||+.. +
T Consensus 103 l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g-p- 180 (437)
T 2gqd_A 103 IVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKG-P- 180 (437)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS-S-
T ss_pred HHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCC-c-
Confidence 4788999999999999988 444322211 11223344566643 2
Q ss_pred CCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 382 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 382 n~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
...+ ....++|+..+..+...|+.. ..++.|+..
T Consensus 181 -----~~~v-~~aCsS~l~Al~~A~~~I~~G--~~d~aLvgG 214 (437)
T 2gqd_A 181 -----NGAT-VTACATGTNSIGEAFKIVQRG--DADAMITGG 214 (437)
T ss_dssp -----EECB-CCGGGHHHHHHHHHHHHHHTT--SCSEEEEEE
T ss_pred -----eEEe-cCCccHHHHHHHHHHHHHHcC--CCCEEEEee
Confidence 1222 234567777888888889877 566666543
No 144
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=47.44 E-value=95 Score=30.58 Aligned_cols=76 Identities=13% Similarity=0.084 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCCCCCcc-----EEEecCCC------------------------------hHHHHHHHHHcCCCCCCc
Q 012522 337 AVAIPAAVKSAGLQIDDIN-----LFEINEAF------------------------------ASQYVYCIKKLGLDPEKV 381 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID-----~~eiheaf------------------------------a~~~~~~~e~LGl~~~~v 381 (461)
..++.++|+++|++++||| +|.-.... ....-.....||+.. |
T Consensus 82 l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g-p- 159 (416)
T 1e5m_A 82 VCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKG-P- 159 (416)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS-C-
T ss_pred HHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCC-c-
Confidence 4788999999999999998 44321110 011223344566642 1
Q ss_pred CCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 382 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 382 n~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
...+ ....+||+..+..+...|+.. ..++.|+.
T Consensus 160 -----~~~v-~~aCsS~l~Al~~A~~~I~~G--~~d~~Lvg 192 (416)
T 1e5m_A 160 -----NNCT-VTACAAGSNAIGDAFRLVQNG--YAKAMICG 192 (416)
T ss_dssp -----EECC-CCGGGHHHHHHHHHHHHHHTT--SCSEEEEE
T ss_pred -----eeCc-cchhHHHHHHHHHHHHHHHcC--CCCEEEEe
Confidence 1222 334577788888888889877 56665554
No 145
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=47.16 E-value=32 Score=34.21 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC-CCCeEE----e-CCCCchHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE-TVPLRT----V-NRQCSSGLQAVADVAT 149 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~-~~~~~~----v-~~~CaSgl~Al~~A~~ 149 (461)
+-..+++++||+++|++|+|||.|..-. ++...-.+.....+...+|.+. ..++.. + ...+++|+..+..+..
T Consensus 283 ~~~~~ai~~al~~agl~~~dId~ve~Hg-tgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l 361 (424)
T 1tqy_A 283 REMAETIRVALDESRTDATDIDYINAHG-SGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVL 361 (424)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCC-CCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecC-ccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHH
Confidence 3457889999999999999999876411 1110000112223333444311 123221 1 2346789999999999
Q ss_pred HHHcCC
Q 012522 150 AIKAGL 155 (461)
Q Consensus 150 ~I~sG~ 155 (461)
.++.|.
T Consensus 362 ~l~~~~ 367 (424)
T 1tqy_A 362 ALEHGV 367 (424)
T ss_dssp HHHHCE
T ss_pred HHHcCC
Confidence 999874
No 146
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=46.29 E-value=26 Score=34.81 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCCCCCeEEe-----CCCCchHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-----NRQCSSGLQAVADVATA 150 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-----~~~CaSgl~Al~~A~~~ 150 (461)
-...++++||+++|++|+|||.|.. |+.++.. .......+...+|-. ..++..+ ....++|+..+..+...
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~--D~~E~~al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~ 356 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPEL--DAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMS 356 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHH--HHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCc--CHHHHHHHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHH
Confidence 4567899999999999999998764 2211100 011222333334431 1222211 12457888999999999
Q ss_pred HHcCCC
Q 012522 151 IKAGLY 156 (461)
Q Consensus 151 I~sG~~ 156 (461)
++.|..
T Consensus 357 l~~~~i 362 (415)
T 1tqy_B 357 LREGVI 362 (415)
T ss_dssp HHHTSB
T ss_pred HhcCCc
Confidence 998863
No 147
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=45.97 E-value=9.6 Score=37.83 Aligned_cols=24 Identities=0% Similarity=0.086 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 78 LAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 78 ~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
+.++++++|+++|++++|||.+++
T Consensus 209 ~~~~~~~~L~~agl~~~did~~~~ 232 (396)
T 1xpm_A 209 FQQSWNEYAKRQGKSLADFASLCF 232 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEe
Confidence 668899999999999999999886
No 148
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=45.44 E-value=1.2e+02 Score=30.06 Aligned_cols=76 Identities=11% Similarity=0.103 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCCCCcc-----EEEecCCCh------------------------------HHHHHHHHHcCCCCCCc
Q 012522 337 AVAIPAAVKSAGLQIDDIN-----LFEINEAFA------------------------------SQYVYCIKKLGLDPEKV 381 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID-----~~eiheafa------------------------------~~~~~~~e~LGl~~~~v 381 (461)
..+++++|+++|++++||| +|.-..... ...-.....||+.. +
T Consensus 98 l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G-p- 175 (430)
T 1ox0_A 98 LYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANG-V- 175 (430)
T ss_dssp HHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS-C-
T ss_pred HHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCC-c-
Confidence 4788999999999999988 443211100 11112334455543 1
Q ss_pred CCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 382 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 382 n~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
...+ ...-++|+..+..+.+.|+.. ..++.|+.
T Consensus 176 -----~~~v-~~aCsS~l~Al~~A~~~I~~G--~~d~aLvg 208 (430)
T 1ox0_A 176 -----CKSI-NTACSSSNDAIGDAFRSIKFG--FQDVMLVG 208 (430)
T ss_dssp -----EECC-CCGGGHHHHHHHHHHHHHHTT--SCSEEEEE
T ss_pred -----eEee-cCchHHHHHHHHHHHHHHHcC--CCCEEEEe
Confidence 1222 334467777888888888876 56665554
No 149
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=40.90 E-value=1.5e+02 Score=29.14 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcCCCCCCcc----EEEecCCC------------------------hH-------HHHHHHHHcCCCCCCc
Q 012522 337 AVAIPAAVKSAGLQIDDIN----LFEINEAF------------------------AS-------QYVYCIKKLGLDPEKV 381 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID----~~eiheaf------------------------a~-------~~~~~~e~LGl~~~~v 381 (461)
..++.++|+.+|++++||| -+.+--.. .. ..-.....||+...-
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~- 157 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN- 157 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE-
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc-
Confidence 4788999999999999998 44332111 00 011234455654311
Q ss_pred CCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 382 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 382 n~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
..+ ....++|+..+..+...++.. ..++.|+.
T Consensus 158 ------~~v-~~aCss~~~Al~~A~~~I~~G--~~d~~lvg 189 (413)
T 3o04_A 158 ------STT-VTACATATNSIGDAFKVIERG--DADAMITG 189 (413)
T ss_dssp ------ECC-CCGGGHHHHHHHHHHHHHHTT--SCSEEEEE
T ss_pred ------eee-cchhHHHHHHHHHHHHHHHcC--CCCEEEEe
Confidence 111 234567788888888888877 66776664
No 150
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=40.09 E-value=1.1e+02 Score=33.88 Aligned_cols=100 Identities=20% Similarity=0.275 Sum_probs=59.1
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCC--C
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPE--T 127 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~--~ 127 (461)
.+|.|.+..--++. ..+.. ...+-...++++||+++|++|+|||.|.. |+.++-. .+.....+...+|... .
T Consensus 264 a~I~G~~~~~dg~~--~~~~~-p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~g--D~~E~~al~~~f~~~~~~~ 338 (915)
T 2qo3_A 264 AVVRGSALNQDGAS--NGLSA-PSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALG--DPIEANALLDTYGRDRDAD 338 (915)
T ss_dssp EEEEEEEEEECCSC--SSTTC-CCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTT--HHHHHHHHHHHTSSSCCTT
T ss_pred EEEEEEEEecCCCc--cCCCC-CCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccC--CHHHHHHHHHHhccccCCC
Confidence 46666665443321 11111 22455678999999999999999998864 3322221 1233444555666421 1
Q ss_pred CCeEE------eC-CCCchHHHHHHHHHHHHHcCC
Q 012522 128 VPLRT------VN-RQCSSGLQAVADVATAIKAGL 155 (461)
Q Consensus 128 ~~~~~------v~-~~CaSgl~Al~~A~~~I~sG~ 155 (461)
.++.. +. ...++|+..+..+...++.|.
T Consensus 339 ~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ 373 (915)
T 2qo3_A 339 RPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGE 373 (915)
T ss_dssp SCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred CcccccCcccceeCCccccchHHHHHHHHHHhcCC
Confidence 23221 11 235789999999999999875
No 151
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=39.04 E-value=16 Score=36.93 Aligned_cols=78 Identities=13% Similarity=0.079 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEE----e-CCCCchHHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT----V-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v-~~~CaSgl~Al~~A~~~I 151 (461)
-..+++++||+++|++++|||.+..= .++...........+...+|-....++.. + ...+++|+..+..+...+
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l 387 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAH-ATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILAL 387 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECC-CCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEec-CCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHH
Confidence 45688999999999999999987641 11110000111222333444311122111 1 234678899999999999
Q ss_pred HcCC
Q 012522 152 KAGL 155 (461)
Q Consensus 152 ~sG~ 155 (461)
+.|.
T Consensus 388 ~~~~ 391 (451)
T 4ddo_A 388 RDGV 391 (451)
T ss_dssp HHTE
T ss_pred hcCC
Confidence 9874
No 152
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=38.76 E-value=85 Score=34.97 Aligned_cols=101 Identities=20% Similarity=0.208 Sum_probs=58.7
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
.+|.|.+..--+... .++.. ...+-...++++||+++|++|+|||.|-. |+.++-+. +.....+...++-....+
T Consensus 246 a~I~g~~~n~dg~~~-~~~t~-P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD--~~E~~Al~~~f~~~~~~~ 321 (965)
T 3hhd_A 246 ATILNAGTNTDGFKE-QGVTF-PSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGD--PQELNGITRALCATRQEP 321 (965)
T ss_dssp EEEEEEEEEECCCCT-TCTTS-CCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHH--HHHHHHHHHHHCSSCSSC
T ss_pred EEEEeeeccCCCCCC-CCCcC-CCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCC--HHHHHHHHHHhcccCCCc
Confidence 567777655433211 11111 22445668999999999999999998763 33332211 223333444444321222
Q ss_pred eEE------e-CCCCchHHHHHHHHHHHHHcCC
Q 012522 130 LRT------V-NRQCSSGLQAVADVATAIKAGL 155 (461)
Q Consensus 130 ~~~------v-~~~CaSgl~Al~~A~~~I~sG~ 155 (461)
... + -..+++|+..+..+...++.|.
T Consensus 322 ~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ 354 (965)
T 3hhd_A 322 LLIGSTKSNMGHPEPASGLAALAKVLLSLEHGL 354 (965)
T ss_dssp EEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eeeeccccccccchhhhhHHHHHHHHHHHhcCC
Confidence 221 1 1346899999999999999875
No 153
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=31.33 E-value=1.4e+02 Score=32.90 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=57.4
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEE-EeecCCCCccchHHHHHHHHcCCC--CC
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFP--ET 127 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~-g~~~~~~~~~~~~a~~ia~~lGl~--~~ 127 (461)
++|.|.+..--++.. + +.. ...+-...++++||+++|++|+|||.|.. |+.++-. .+.....+...+|.. ..
T Consensus 286 a~I~G~~~~~dg~~~-~-~~~-P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g--D~~E~~al~~~fg~~~~~~ 360 (917)
T 2hg4_A 286 AVLRGSAVNQDGASN-G-LTA-PSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG--DPIEVHALLSTYGAERDPD 360 (917)
T ss_dssp EEEEEEEEEECCSCS-S-SSC-CCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH--HHHHHHHHHTTTTTSSCTT
T ss_pred EEEEEEEEecCCCcc-C-CCC-CCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC--cHHHHHHHHHHhccccCCC
Confidence 567777765444321 1 111 12455668899999999999999998764 2222111 111222333344431 11
Q ss_pred CCeEE------eC-CCCchHHHHHHHHHHHHHcCC
Q 012522 128 VPLRT------VN-RQCSSGLQAVADVATAIKAGL 155 (461)
Q Consensus 128 ~~~~~------v~-~~CaSgl~Al~~A~~~I~sG~ 155 (461)
.++.. +. ...++|+..+..+...++.|.
T Consensus 361 ~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ 395 (917)
T 2hg4_A 361 DPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGE 395 (917)
T ss_dssp SCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTE
T ss_pred CceeccCcccceecchhhhHHHHHHHHHHHHhcCC
Confidence 23221 11 235788999999999999875
No 154
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=30.94 E-value=1.6e+02 Score=25.05 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHHHcC-CCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEKTR-LNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~ag-l~~~~Id~vi~ 101 (461)
...+-+.+.+.+.|++.| +..++||-+-+
T Consensus 25 ~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~V 54 (156)
T 3nq4_A 25 FINDSLLDGAVDALTRIGQVKDDNITVVWV 54 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceEEEEc
Confidence 455677788888999999 98888885544
No 155
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=30.17 E-value=91 Score=26.60 Aligned_cols=29 Identities=14% Similarity=-0.046 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
...+.+.+.+.+.|++.|++.++||-+-+
T Consensus 24 ~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~V 52 (157)
T 2obx_A 24 DIVDQCVSAFEAEMADIGGDRFAVDVFDV 52 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 44567778888889999987766665544
No 156
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=29.86 E-value=28 Score=34.87 Aligned_cols=94 Identities=9% Similarity=0.129 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++| ++|||++.+- +.+........+.||+.. .+. .-+.+ .-++|+..+..+...++
T Consensus 90 ~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~------~dv~~-aC~gg~~AL~~A~~~i~ 160 (425)
T 3sqz_A 90 AGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARS------FEMKE-AAYSATAALNYAKLHVE 160 (425)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEE------EEECC-C-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeE------EEEcC-HhHHHHHHHHHHHHHHH
Confidence 478899999998 9999999753 234455667788999875 221 11211 11334444555555555
Q ss_pred ccCCCCCEEEEEec-------------ccCcceeEEEEEEccch
Q 012522 411 RRGKDCRFGVISMC-------------IGSGMGAAAVFERGDCV 441 (461)
Q Consensus 411 ~~~~~~~~gl~~~~-------------~g~G~g~A~v~~~~~~~ 441 (461)
.. ..+.+|+... ..|....|+||.+.+.+
T Consensus 161 sg--~~~~vLVvgae~~s~~~~~~~~~lfGDGA~A~ll~~~~~i 202 (425)
T 3sqz_A 161 KH--PDTRVLVLASDIAKYGIGTPGESTQGAGSIAMLVKKDPRI 202 (425)
T ss_dssp HS--TTCEEEEEEEEEECCCTTSGGGGGCEEEEEEEEEEESCSS
T ss_pred cC--CCCeEEEEEEehhcccCCCCCCCcccceeeEEEeecCCce
Confidence 54 3455444321 11223467888776543
No 157
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=29.50 E-value=1.5e+02 Score=25.26 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHHH-cCCCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEK-TRLNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~-agl~~~~Id~vi~ 101 (461)
...+.+.+.+.+.|++ .|++.++||-+-+
T Consensus 30 ~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~V 59 (159)
T 1kz1_A 30 QAIEPLVKGAVETMIEKHDVKLENIDIESV 59 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 4556777888888999 8988777775543
No 158
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=29.48 E-value=21 Score=37.32 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 335 GPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 335 ~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
-|..+++.+|+++|++++|||.+-.++.
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 3678999999999999999999998765
No 159
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=28.82 E-value=2e+02 Score=28.32 Aligned_cols=77 Identities=17% Similarity=0.071 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCC-CCCCcc-----EEEecCC-----------------------C-------hHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGL-QIDDIN-----LFEINEA-----------------------F-------ASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl-~~~DID-----~~eihea-----------------------f-------a~~~~~~~e~LGl~~~~ 380 (461)
..++.++|+.+|+ ++++|| +|.-... + ....-.....||+.. +
T Consensus 93 l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g-p 171 (431)
T 2ix4_A 93 VCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQG-P 171 (431)
T ss_dssp HHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCS-C
T ss_pred HHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHCCCC-c
Confidence 4788999999999 888776 5542211 0 012223445566643 2
Q ss_pred cCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 381 VNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 381 vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
...+ ....++|+..+..+...|+.. ..++.|+..
T Consensus 172 ------~~~v-~taCsS~l~Al~~A~~~I~~G--~~d~aLvgG 205 (431)
T 2ix4_A 172 ------NHAA-VTACATGAHSIGDATRMIQFG--DADVMVAGG 205 (431)
T ss_dssp ------EECB-CCGGGHHHHHHHHHHHHHHHT--SCSEEEEEE
T ss_pred ------eeCc-cChhHHHHHHHHHHHHHHHcC--CCCEEEEee
Confidence 1222 334567777888888888877 566666543
No 160
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=27.86 E-value=1e+02 Score=26.37 Aligned_cols=29 Identities=17% Similarity=-0.075 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
...+-+.+.+.+.|++.|++.++|+-+-+
T Consensus 23 ~I~~~Ll~gA~~~l~~~gv~~~~i~v~~V 51 (158)
T 1di0_A 23 DIVDEARKSFVAELAAKTGGSVEVEIFDV 51 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 44566778888889999987766665544
No 161
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=27.29 E-value=1.4e+02 Score=24.98 Aligned_cols=49 Identities=27% Similarity=0.304 Sum_probs=31.1
Q ss_pred HHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC
Q 012522 82 LKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN 134 (461)
Q Consensus 82 ~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~ 134 (461)
..+.+++.+|+++||=.|++ +++++.. ..++|..+ ..+|+. .+|.+...
T Consensus 57 l~eii~~N~l~~eDIvSv~F-TvT~DL~-A~FPA~aa-R~~Gw~-~VPLmc~q 105 (148)
T 1xho_A 57 LKEMAEKNGLEEDDIISIIF-TVTKDLD-AAFPAIAA-RNMGWT-STALMCMN 105 (148)
T ss_dssp HHHHHHHTTCCGGGEEEEEE-EECTTCC-SSCTHHHH-HHTTCT-TSEEEEEE
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCccC-ccChHHHH-HHcCCC-ccchhhcc
Confidence 34556678999999999988 4556654 33344333 345883 57766553
No 162
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=26.35 E-value=62 Score=32.29 Aligned_cols=78 Identities=10% Similarity=0.079 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc-chHHHHHHHHcCCCCCCCeE----Ee-CCCCchHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR-AMECRMAAFYAGFPETVPLR----TV-NRQCSSGLQAVADVAT 149 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~-~~~a~~ia~~lGl~~~~~~~----~v-~~~CaSgl~Al~~A~~ 149 (461)
+-..+++++||+++|++++|||.+..= .++... + ......+...+|-. ..++. .+ ...+++|+..+..+..
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~-~D~~E~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~ 378 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAH-ATGTQV-GDLAEGRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVL 378 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECC-CCSCHH-HHHHHHHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe-CCcCcc-chHHHHHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHH
Confidence 356788999999999999999977642 211110 0 11111222233321 11111 11 1335678888888888
Q ss_pred HHHcCCC
Q 012522 150 AIKAGLY 156 (461)
Q Consensus 150 ~I~sG~~ 156 (461)
.++.|..
T Consensus 379 ~l~~~~i 385 (434)
T 2gp6_A 379 ALRDQVI 385 (434)
T ss_dssp HHHHSCC
T ss_pred HHhcCcc
Confidence 8887753
No 163
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=26.05 E-value=1.9e+02 Score=24.55 Aligned_cols=29 Identities=7% Similarity=0.102 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
...+-+.+.+.+.|++.|++.++|+-+-+
T Consensus 25 ~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1rvv_A 25 FITSKLLSGAEDALLRHGVDTNDIDVAWV 53 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 44567778888999999988777776654
No 164
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=25.96 E-value=2.2e+02 Score=28.20 Aligned_cols=77 Identities=16% Similarity=0.039 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCC-CCcc-----EEEecCCC------------------------------hHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQI-DDIN-----LFEINEAF------------------------------ASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~-~DID-----~~eiheaf------------------------------a~~~~~~~e~LGl~~~~ 380 (461)
..+++++|+++|+++ ++|| +|.-.... ....-.....||+.. |
T Consensus 102 l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g-p 180 (438)
T 2iwz_A 102 IGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKG-P 180 (438)
T ss_dssp HHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTCCS-C
T ss_pred HHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCCCC-c
Confidence 468899999999998 7776 55321100 012223344566643 2
Q ss_pred cCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 381 VNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 381 vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
...+ ....+||+..+..+...|+.. ..++.|+..
T Consensus 181 ------~~~v-~taCsS~l~Al~~A~~~I~~G--~~d~aLvgG 214 (438)
T 2iwz_A 181 ------NHAV-STACTTGAHAVGDSFRFIAHG--DADVMVAGG 214 (438)
T ss_dssp ------EECB-CCGGGHHHHHHHHHHHHHHHT--SCSEEEEEE
T ss_pred ------eeee-cCchhHHHHHHHHHHHHHHcC--CCCEEEEEe
Confidence 1122 334567788888888889877 566655543
No 165
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=25.47 E-value=2e+02 Score=28.40 Aligned_cols=77 Identities=10% Similarity=0.106 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcCCCCCCcc-----EEEecCCC--h----------------------------HHHHHHHHHcCCCCCCc
Q 012522 337 AVAIPAAVKSAGLQIDDIN-----LFEINEAF--A----------------------------SQYVYCIKKLGLDPEKV 381 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID-----~~eiheaf--a----------------------------~~~~~~~e~LGl~~~~v 381 (461)
..+++++|+++|+++++|| +|.-.... . ...-.....+|+.. |
T Consensus 97 ~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g-p- 174 (428)
T 3mqd_A 97 HIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKG-I- 174 (428)
T ss_dssp HHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCS-C-
T ss_pred HHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCC-c-
Confidence 4688899999999988887 44321100 0 11122334456533 1
Q ss_pred CCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 382 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 382 n~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
...+ ...-+||+..+..+.+.|+.. ..++.|+..
T Consensus 175 -----~~tv-~~aCsSgl~Ai~~A~~~I~~G--~~d~alvgG 208 (428)
T 3mqd_A 175 -----NYSI-SSACATSNHCIGNAYEMIQYG--KQDRMFAGG 208 (428)
T ss_dssp -----EECC-CCGGGHHHHHHHHHHHHHHTT--SCSEEEEEE
T ss_pred -----eeee-cCccHHHHHHHHHHHHHHHcC--CCCEEEEEe
Confidence 1222 334577888899999999987 677777654
No 166
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=23.74 E-value=1.8e+02 Score=24.61 Aligned_cols=29 Identities=14% Similarity=-0.018 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
...+-+.+.+.+.|++.|++.++||-+-+
T Consensus 25 ~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1hqk_A 25 ALVDRLVEGAIDCIVRHGGREEDITLVRV 53 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 44567778888899999988777776654
No 167
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=22.56 E-value=1.3e+02 Score=25.60 Aligned_cols=63 Identities=11% Similarity=0.002 Sum_probs=34.3
Q ss_pred CCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC
Q 012522 45 PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (461)
Q Consensus 45 ~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl 124 (461)
++.+...+++|.|- | ++.+.. ...++++++|++.|+. |+.+.. ..--. ....-..++..+|+
T Consensus 4 ~~~~~~~lvvGIGc----r------rg~~~~-~i~~ai~~aL~~~gl~---v~~lAT--id~K~--dE~gL~e~A~~lgv 65 (155)
T 3by5_A 4 ELGQAMVTVAGIGC----R------KGAASD-AIIAAVRAAERAFGVT---VDYLAT--APLKA--DEAGLAEAAKGLSL 65 (155)
T ss_dssp ------CEEEEEEE----C------SSCCHH-HHHHHHHHHHHHHTCC---CCEEEE--SSCCS--CCHHHHHHHHHTTC
T ss_pred ccCCCCEEEEEEcc----C------CCCCHH-HHHHHHHHHHHHCCCC---eEEEEc--hhhhC--CCHHHHHHHHHhCC
Confidence 34455678898873 2 244444 4668999999999986 665543 21111 11122346677887
Q ss_pred C
Q 012522 125 P 125 (461)
Q Consensus 125 ~ 125 (461)
|
T Consensus 66 P 66 (155)
T 3by5_A 66 S 66 (155)
T ss_dssp C
T ss_pred C
Confidence 4
No 168
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=22.41 E-value=34 Score=35.57 Aligned_cols=33 Identities=33% Similarity=0.453 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 335 ~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
+...+++++++++|++.+|+|++-+||+-+...
T Consensus 49 g~~~~l~~~~~~~~~~~~~~~lir~nea~pvig 81 (610)
T 2d0o_A 49 GIQEALALVARGAGIAVSDISLIRINEATPVIG 81 (610)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEEECCSEEE
T ss_pred HHHHHHHHHHHHcCCChhhceeeeecccCcccc
Confidence 557899999999999999999999999988643
No 169
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=21.65 E-value=44 Score=33.19 Aligned_cols=26 Identities=12% Similarity=0.252 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEE
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVV 101 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~ 101 (461)
+-...+++++|+++|++++|||.+..
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~ 310 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNA 310 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 34668899999999999999998764
No 170
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=21.12 E-value=51 Score=34.41 Aligned_cols=47 Identities=11% Similarity=0.165 Sum_probs=31.1
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEe
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGT 103 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~ 103 (461)
-.|..+-.=.|.|-... +. .+=..|++.+|+.+|++++|||.|.+..
T Consensus 31 ~ivaA~eEERftR~Kh~--~~----~fP~~AI~~cL~~AGi~~~DID~Va~~~ 77 (576)
T 3ven_A 31 RIAAFAEEERLTRKKHG--YN----TAPVQAAAFCLAQAGLTVDDLDAVAFGW 77 (576)
T ss_dssp EEEEEEEHHHHHCCTTC--TT----SCCHHHHHHHHHHHTCCGGGCSEEEESS
T ss_pred EEEEEEEEEEeeeeccc--CC----CCCHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 34555666677763211 11 1233578899999999999999999743
No 171
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=20.66 E-value=2.4e+02 Score=22.91 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=32.7
Q ss_pred HHHHHHHcCCCc-CCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCC
Q 012522 82 LKAVIEKTRLNP-SEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR 135 (461)
Q Consensus 82 ~~~AL~~agl~~-~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 135 (461)
..+.+++.+|++ +||=.+++ +++++.. ..++|..+- .+|+. .+|.+....
T Consensus 27 l~~i~~~N~l~~~~divSv~F-T~T~DL~-a~FPA~aaR-~~g~~-~VpL~c~qE 77 (122)
T 1ufy_A 27 LLKMLEANGIQSYEELAAVIF-TVTEDLT-SAFPAEAAR-QIGMH-RVPLLSARE 77 (122)
T ss_dssp HHHHHHHHTCCCGGGEEEEEE-EECTTCC-SCCHHHHHH-HTTGG-GSCEEEEEC
T ss_pred HHHHHHhcCCCChHhEEEEEE-EeCCccC-ccChHHHHH-HcCCC-ccchhhccc
Confidence 344556789999 99999988 4556654 344554333 55884 677776543
No 172
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=20.37 E-value=2e+02 Score=23.48 Aligned_cols=50 Identities=16% Similarity=0.329 Sum_probs=32.0
Q ss_pred HHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHc-CCCCCCCeEEeCC
Q 012522 82 LKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA-GFPETVPLRTVNR 135 (461)
Q Consensus 82 ~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~l-Gl~~~~~~~~v~~ 135 (461)
..+.+++.+|+++||=.+++ +++++.. ..++|..+ ..+ |+. .+|.+....
T Consensus 28 l~~i~~~N~l~~~dIvSv~F-T~T~DL~-a~FPA~aa-R~~~gw~-~VpL~c~qE 78 (127)
T 1dbf_A 28 LEKIIEENHTKPEDVVQMLL-SATPDLH-AVFPAKAV-RELSGWQ-YVPVTCMQE 78 (127)
T ss_dssp HHHHHHHHCCCGGGEEEEEE-EECTTCC-SSCTHHHH-HTSTTCT-TSCEEEEEC
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCccC-ccChHHHH-hccCCCC-ccchhhccc
Confidence 34456678999999999988 4556654 33444433 345 784 677776543
Done!