Your job contains 1 sequence.
>012525
MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ
ERYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICP
NCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYG
GELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGG
SSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHAN
LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATT
LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGV
QQALLKMLEGTETKTFAAVSKVSRDNLYIKTSGLDSKTLWP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012525
(461 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 732 2.6e-94 2
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 649 4.0e-83 2
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 722 2.3e-71 1
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 516 9.9e-52 2
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 533 2.4e-51 1
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 528 8.3e-51 1
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 527 1.1e-50 1
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 527 1.1e-50 1
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 507 1.1e-50 2
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 498 3.7e-50 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 520 5.8e-50 1
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 497 7.7e-50 2
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 518 9.5e-50 1
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 514 2.5e-49 1
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 385 3.2e-49 2
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 385 4.9e-49 2
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 385 6.4e-49 2
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 385 8.4e-49 2
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 385 8.4e-49 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 508 1.1e-48 1
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 386 1.6e-48 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 505 2.3e-48 1
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 505 2.3e-48 1
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 377 1.4e-47 2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 487 1.8e-46 1
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 365 1.8e-46 2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 482 6.2e-46 1
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 349 6.9e-44 2
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 353 1.4e-43 2
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 319 7.7e-39 2
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 387 2.3e-35 1
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 387 2.3e-35 1
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 369 3.0e-33 1
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 327 9.2e-29 1
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 159 1.9e-21 3
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 159 1.9e-21 3
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 153 8.1e-20 3
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 138 6.2e-19 3
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 144 3.5e-14 2
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 150 9.5e-14 2
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 157 2.9e-13 2
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 152 3.9e-13 2
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 155 6.2e-13 2
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 153 7.1e-12 2
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 150 9.8e-12 2
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 148 1.6e-11 2
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 142 4.2e-11 2
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 139 2.1e-10 2
TIGR_CMR|CHY_2164 - symbol:CHY_2164 "ATPase, AAA family" ... 160 8.4e-09 1
UNIPROTKB|H0YM48 - symbol:CLPX "ATP-dependent Clp proteas... 151 2.6e-08 1
UNIPROTKB|I3LI39 - symbol:I3LI39 "Uncharacterized protein... 121 7.6e-07 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 141 1.1e-06 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 136 4.2e-06 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 136 4.2e-06 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 136 4.9e-06 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 134 6.1e-06 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 134 6.5e-06 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 131 1.4e-05 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 131 1.4e-05 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 131 1.4e-05 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 131 1.4e-05 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 131 1.4e-05 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 131 1.4e-05 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 131 1.4e-05 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 131 1.5e-05 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 131 1.5e-05 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 131 1.5e-05 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 131 1.6e-05 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 130 1.9e-05 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 131 2.3e-05 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 129 2.4e-05 1
SGD|S000005643 - symbol:RPT5 "ATPase of the 19S regulator... 129 2.7e-05 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 129 2.7e-05 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 129 2.7e-05 1
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 131 3.5e-05 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 126 4.3e-05 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 127 4.3e-05 1
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G... 119 4.7e-05 3
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 126 5.1e-05 1
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 126 5.3e-05 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 126 5.5e-05 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 128 5.6e-05 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 126 5.8e-05 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 126 5.9e-05 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 126 5.9e-05 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 126 5.9e-05 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 126 5.9e-05 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 126 5.9e-05 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 126 5.9e-05 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 126 5.9e-05 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 126 5.9e-05 1
UNIPROTKB|A2VDN5 - symbol:SPAST "Spastin" species:9913 "B... 119 5.9e-05 3
RGD|1308494 - symbol:Spast "spastin" species:10116 "Rattu... 119 6.0e-05 3
UNIPROTKB|F1M9D2 - symbol:Spast "Spastin" species:10116 "... 119 6.0e-05 3
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 125 6.4e-05 1
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 125 6.6e-05 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 129 6.7e-05 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 125 7.6e-05 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 125 7.8e-05 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 125 7.8e-05 1
WARNING: Descriptions of 154 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 732 (262.7 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 147/172 (85%), Positives = 159/172 (92%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D PTPKEICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P +D+DD
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDD 302
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
NVEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL
Sbjct: 303 NVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLL 362
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGT
Sbjct: 363 TVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGT 414
Score = 226 (84.6 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 73/210 (34%), Positives = 97/210 (46%)
Query: 1 MSGIWRWKRQLSDIA--SSSMLPSSRTRFTPLVAGPVNYLSNN-SIGRAAGGHRRQPFFI 57
MSG+WR R L +A + S+ P S L + P + + GG F +
Sbjct: 1 MSGLWRL-RNLKSLALHARSISPVSNLYSLELGSCPRRRIQERFKSEQGGGGGGGDDFPV 59
Query: 58 GIQERYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSN---PSN--LSPPVPAPAVDGSG- 111
+ T RK+RAE NCPRCSK MDLLFSN PS+ L P + + G+G
Sbjct: 60 PV-----------TRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSDS-SGAGD 107
Query: 112 --GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-------SISAXXXXXXXXXKRXXXX 162
+Q+VN CP CK+AY F P ++PLQG+F+EI + + K+
Sbjct: 108 KTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKSTRKQQQHS 167
Query: 163 XX-------XXXXXXXFWDTLRSYGGELPP 185
FWDTLRSYG E PP
Sbjct: 168 KDPNQGFNYRNKLRSSFWDTLRSYGAE-PP 196
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 649 (233.5 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 133/172 (77%), Positives = 148/172 (86%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD-NDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E D N D
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 316
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGT 368
Score = 203 (76.5 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 68 GGDTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAY 126
GGD + IR++ NCPRCS M ++FSN P +L+ P G YQAVN C CK+A+
Sbjct: 70 GGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAF 122
Query: 127 YFRPHRIAPLQGSFVEI 143
YFRP +++PLQGSF+E+
Sbjct: 123 YFRPFKLSPLQGSFIEL 139
Score = 37 (18.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGM 393
GE V+ L KLL +V ++G+
Sbjct: 354 GEGVQQSLLKLLEGTVVSVPIPEKGL 379
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 152/198 (76%), Positives = 165/198 (83%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPKTAAAVDND 318
D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G TAA +D
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADD 216
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKL
Sbjct: 217 DMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKL 276
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FA 437
L A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 277 LTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 336
Query: 438 AVSKVSR-DNLYIKTSGL 454
K R DN+ I T +
Sbjct: 337 GARKHPRGDNIQIDTKDI 354
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 516 (186.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 110/168 (65%), Positives = 136/168 (80%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
P+EI + LD++VIGQE +KKVLSVAVYNHYKR+ + SG + VE+
Sbjct: 60 PREIKEVLDEYVIGQEHSKKVLSVAVYNHYKRL------RNSGVISE----------VEI 103
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
KSNVLL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL A
Sbjct: 104 SKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQAAN 163
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
FNVEAAQ+G++YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 164 FNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEGVQQALLKVIEGT 211
Score = 38 (18.4 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 30 LVAGPVNYLSNNSIGRAAG 48
L+AGP Y+ N + G
Sbjct: 24 LIAGPEAYICNECVELCGG 42
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 110/173 (63%), Positives = 140/173 (80%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ +PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 63 DGVPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 168 LQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGT 220
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 111/173 (64%), Positives = 140/173 (80%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR LK S PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKR-----LKNSS---PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 108/173 (62%), Positives = 142/173 (82%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ +PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ N+
Sbjct: 61 DGVPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS---------------KNN 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 D-VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 165 LQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 217
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 111/173 (64%), Positives = 141/173 (81%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E+LP P+EI LD++VIGQE+AKKVL+VAVYNHYKRI NL G +
Sbjct: 55 EELPKPQEIKAYLDQYVIGQEEAKKVLAVAVYNHYKRI---NL----GGKI--------- 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct: 99 DDVELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT
Sbjct: 159 IQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGT 211
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 507 (183.5 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 106/173 (61%), Positives = 139/173 (80%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P EI + LD++VIGQ+ AKK L+VAVYNHYKRI ++N K
Sbjct: 59 KDVPKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRI-NSNSKI--------------- 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+ L+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 DDVELAKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ A+++VE A++G++YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGT
Sbjct: 163 IQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGT 215
Score = 37 (18.1 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 18 SMLPSSRTRFTPLVAGPVNYLSNNSI 43
S ++T+ LVAGP Y+ + I
Sbjct: 14 SFCGKTQTQVRKLVAGPGVYICDECI 39
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 498 (180.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 104/171 (60%), Positives = 136/171 (79%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++VIGQ++AKKVL+VAVYNHYKRI S +P +
Sbjct: 63 LPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRIE-------SMGKPS---------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE++KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADAT LT+AGYVGEDVE+I+ LL
Sbjct: 107 VEMQKSNILLLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A+++VE AQ+G++YIDE+DKI +K++S +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 AADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGT 217
Score = 41 (19.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 12 SDIASSSMLPSSRTRFTPLVAGPVNYLSNNSI 43
SD + S S+ L+AGP Y+ + I
Sbjct: 8 SDNLTCSFCGKSQDEVKKLIAGPTVYICDECI 39
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 112/168 (66%), Positives = 136/168 (80%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
PKEI K LD++VIGQE +KKVLSVAVYNHYKR+ +NL S VE+
Sbjct: 61 PKEIKKVLDEYVIGQEHSKKVLSVAVYNHYKRL--SNLSVIS--------------EVEI 104
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
KSNVLL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+IL KLL A
Sbjct: 105 SKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQAAN 164
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
FNV+AAQ+G++YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 165 FNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLKVIEGT 212
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 497 (180.0 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 102/174 (58%), Positives = 134/174 (77%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP P EI + L+ +VIGQ+ AK+ L+VAVYNHYKRI + S EP
Sbjct: 59 DELPKPAEIREFLEGYVIGQDTAKRTLAVAVYNHYKRIQAGEKGRDSRCEP--------- 109
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+L++GPTG GKT LA+TLA+ +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct: 110 --VELTKSNILMLGPTGCGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
+ A+++V+ A+ G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 168 IQAADYDVKRAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQ 221
Score = 39 (18.8 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 13 DIASSSMLPSSRTRFTPLVAGPVNYLSNNSI 43
D+ S S+ + L+AGP Y+ + I
Sbjct: 9 DLLKCSFCGKSQKQVKKLIAGPGVYICDECI 39
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 107/173 (61%), Positives = 141/173 (81%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP+P EI + LD++VIGQ+ AKKVL+VAVYNHYKR L+ G DN
Sbjct: 63 EALPSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKR-----LRNG-----------DNH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NGIELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 107/171 (62%), Positives = 138/171 (80%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 218
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 385 (140.6 bits), Expect = 3.2e-49, Sum P(2) = 3.2e-49
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 269 EKRGGEVLDSSQDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 328
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 329 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 387
Query: 427 MLEGT 431
+LEGT
Sbjct: 388 LLEGT 392
Score = 155 (59.6 bits), Expect = 3.2e-49, Sum P(2) = 3.2e-49
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + AE +T+
Sbjct: 168 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTS 221
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 385 (140.6 bits), Expect = 4.9e-49, Sum P(2) = 4.9e-49
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 242 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 301
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 302 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 360
Query: 427 MLEGT 431
+LEGT
Sbjct: 361 LLEGT 365
Score = 151 (58.2 bits), Expect = 4.9e-49, Sum P(2) = 4.9e-49
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 141 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 194
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 385 (140.6 bits), Expect = 6.4e-49, Sum P(2) = 6.4e-49
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 254 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 313
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 314 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 372
Query: 427 MLEGT 431
+LEGT
Sbjct: 373 LLEGT 377
Score = 151 (58.2 bits), Expect = 6.4e-49, Sum P(2) = 6.4e-49
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 385 (140.6 bits), Expect = 8.4e-49, Sum P(2) = 8.4e-49
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 268 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 327
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 328 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 386
Query: 427 MLEGT 431
+LEGT
Sbjct: 387 LLEGT 391
Score = 151 (58.2 bits), Expect = 8.4e-49, Sum P(2) = 8.4e-49
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 385 (140.6 bits), Expect = 8.4e-49, Sum P(2) = 8.4e-49
Identities = 77/125 (61%), Positives = 99/125 (79%)
Query: 308 EPKTAAAVDND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 268 EKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 327
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 328 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 386
Query: 427 MLEGT 431
+LEGT
Sbjct: 387 LLEGT 391
Score = 151 (58.2 bits), Expect = 8.4e-49, Sum P(2) = 8.4e-49
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 106/171 (61%), Positives = 136/171 (79%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+ G + K D+
Sbjct: 60 LPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRL---------GNQTKK-------DS 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENIIQKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGT
Sbjct: 164 KCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGT 214
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 386 (140.9 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 77/125 (61%), Positives = 100/125 (80%)
Query: 308 EPKTAAAVDN-DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
E + +D+ +D+++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D TTLTQAGY
Sbjct: 265 EKRGGEVLDSPNDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGY 324
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LLK
Sbjct: 325 VGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLLK 383
Query: 427 MLEGT 431
+LEGT
Sbjct: 384 LLEGT 388
Score = 147 (56.8 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 217
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 105/171 (61%), Positives = 137/171 (80%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR L+ G +
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKR-----LRNGD----------TTSEG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +++V A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGT 220
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 105/171 (61%), Positives = 137/171 (80%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR L+ G +
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKR-----LRNGD----------TTSEG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +++V A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGT 220
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 377 (137.8 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 77/126 (61%), Positives = 100/126 (79%)
Query: 308 EPKTAAAVDN-DDNVELEKSNVLLMGPTGS-GKTLLAKTLARHVNVPFVIADATTLTQAG 365
E + +D+ +D+++LEKSN+LL+GPTGS GKTLLA+TLA+ ++VPF I D TTLTQAG
Sbjct: 251 EKRGGEVLDSPNDDIKLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCTTLTQAG 310
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGED+ES++ KLL A +NVE AQQG+V++DEVDKI ++ RDV GEGVQQ LL
Sbjct: 311 YVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEGVQQGLL 369
Query: 426 KMLEGT 431
K+LEGT
Sbjct: 370 KLLEGT 375
Score = 147 (56.8 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 217
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 101/169 (59%), Positives = 128/169 (75%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
TPK+I K D F+ QE AKK+LSVAVYNHYK L N +VE
Sbjct: 59 TPKDIKKYFDSFITAQEDAKKILSVAVYNHYKCFVGNRL---------------NSKDVE 103
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
+ KSN+L++GPTG GKTL AKTLAR +NVPF I DAT++T+AGYVG+DVE+IL LL A
Sbjct: 104 ITKSNILIIGPTGCGKTLFAKTLARFLNVPFAICDATSITEAGYVGDDVENILRMLLQSA 163
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
++NVEAAQ+G+VYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT
Sbjct: 164 DYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIMEGT 212
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 365 (133.5 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 74/132 (56%), Positives = 100/132 (75%)
Query: 301 LKKGSGAEPKTAAAVDNDD-NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADAT 359
L + + E + +D+ +++LEKSN++L+GPTGSGKTLLA+TLA+ ++VPF I D T
Sbjct: 237 LNQQTPPEKRGGEVLDSTHTDIKLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCT 296
Query: 360 TLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG 419
TLTQAGYVGED+ES++ KLL A + +E AQQG+V++DEVDKI ++ RDV GEG
Sbjct: 297 TLTQAGYVGEDIESVIAKLLQDANYVIEKAQQGIVFLDEVDKIGS-VPGIHQLRDVGGEG 355
Query: 420 VQQALLKMLEGT 431
VQQ LLK+LEGT
Sbjct: 356 VQQGLLKLLEGT 367
Score = 149 (57.5 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
P PK+I LDK+V+GQ+ AKKVLSVAVYNHYKRIY+ N+ GS
Sbjct: 156 PPPKKIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYN-NMPAGS 198
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 99/169 (58%), Positives = 133/169 (78%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
TPKE+ LD++VIGQ++AKKV SV VYNHYKR++ A L+ DD+ E
Sbjct: 62 TPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQ---------------DDDTE 106
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
L KSN+LL+GPTGSGKTLLA+TLA+ ++VP I DAT+LT+AGYVGEDVE+IL +LL A
Sbjct: 107 LFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAA 166
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +V+ AQ+G+V+IDE+DKI + +E+ +I+RDVSGEGVQQALLK++EG+
Sbjct: 167 DGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGS 215
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 349 (127.9 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 67/113 (59%), Positives = 92/113 (81%)
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+++EL KSNVL++GP+GSGKTLLA TLA+ +NVP I D T LTQAGY+GEDVE + +
Sbjct: 126 DEDLELSKSNVLVVGPSGSGKTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIER 185
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
LL AEF+V A++G++ +DE+DK+ K A S+ ++DVSGEGVQQ+LLK++EG
Sbjct: 186 LLVNAEFDVARAEKGIIVLDEIDKLAKPAASIG-TKDVSGEGVQQSLLKIIEG 237
Score = 133 (51.9 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
++PTPK + K LD++++GQE KKVLSVAVYNHY RI + KKG
Sbjct: 35 NIPTPKALKKFLDEYIVGQEIGKKVLSVAVYNHYLRI-NDKQKKG 78
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 353 (129.3 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 73/126 (57%), Positives = 94/126 (74%)
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
A P A + + +V LEKSNVLL+GP+G GKT L +TLAR ++VP + D T++TQAGY
Sbjct: 239 AAPTFRALPEKEQSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGY 298
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS-RDVSGEGVQQALL 425
VGEDVES++ KL+ A NVE AQQG+V++DEVDKI E + + RDVSGEGVQ ALL
Sbjct: 299 VGEDVESVIQKLVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHALL 358
Query: 426 KMLEGT 431
K++EGT
Sbjct: 359 KLVEGT 364
Score = 133 (51.9 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
P P +I + LDKFV+GQ+KAKK L+V VY HY+R+ H N++ G+ + +T A
Sbjct: 128 PYPTQIAEYLDKFVVGQKKAKKTLAVGVYQHYRRLEH-NIETGASSIYQTHA 178
Score = 46 (21.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGM 393
GE V+ L KL+ NV++ ++GM
Sbjct: 350 GEGVQHALLKLVEGTVVNVKSGKKGM 375
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 319 (117.4 bits), Expect = 7.7e-39, Sum P(2) = 7.7e-39
Identities = 69/138 (50%), Positives = 100/138 (72%)
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
L+KSN++L+G +G+GKT + + LA ++VP VI D TTLTQAGYVG+DV++++ KLLA+A
Sbjct: 192 LDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQKLLAEA 251
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNIS--RDVSGEGVQQALLKMLEGTETKT---FA 437
++E Q+G+V++DE DKI ++ L+ S RDVSG+GVQQALLK++EG+ K A
Sbjct: 252 MGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQALLKLVEGSLVKVRDPLA 311
Query: 438 AVSKVSRD--NLYIKTSG 453
SKV+ D N+ SG
Sbjct: 312 PNSKVTIDTSNILFIASG 329
Score = 120 (47.3 bits), Expect = 7.7e-39, Sum P(2) = 7.7e-39
Identities = 23/39 (58%), Positives = 33/39 (84%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK 302
PKEI + L+K+V+GQE+AKK L+VAVY HY+R+ + NL+
Sbjct: 101 PKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVEN-NLR 138
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 387 (141.3 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 83/154 (53%), Positives = 113/154 (73%)
Query: 283 KVLSVAVYNHYKRIYHANLKK-GSGAEPKT---AAAVDND-DNVELEKSNVLLMGPTGSG 337
K+L +A + + A++++ GS P+ +D+ D+++LEKSN+LL+GPTGSG
Sbjct: 239 KLLQIAGISPHGNALGASMQQQGSQQMPQEKRGGEVLDSPHDDIKLEKSNILLLGPTGSG 298
Query: 338 KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYID 397
KTLLA+TLA+ ++VPF I D TTLTQAGYVGED+ES++ KLL A +NVE AQQG+V++D
Sbjct: 299 KTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLD 358
Query: 398 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
EVDKI ++ RDV GEGVQQ LLK+LEGT
Sbjct: 359 EVDKIGS-VPGIHQLRDVGGEGVQQGLLKLLEGT 391
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 387 (141.3 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 83/154 (53%), Positives = 113/154 (73%)
Query: 283 KVLSVAVYNHYKRIYHANLKK-GSGAEPKT---AAAVDND-DNVELEKSNVLLMGPTGSG 337
K+L +A + + A++++ GS P+ +D+ D+++LEKSN+LL+GPTGSG
Sbjct: 239 KLLQIAGISPHGNALGASMQQQGSQQMPQEKRGGEVLDSPHDDIKLEKSNILLLGPTGSG 298
Query: 338 KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYID 397
KTLLA+TLA+ ++VPF I D TTLTQAGYVGED+ES++ KLL A +NVE AQQG+V++D
Sbjct: 299 KTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLD 358
Query: 398 EVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
EVDKI ++ RDV GEGVQQ LLK+LEGT
Sbjct: 359 EVDKIGS-VPGIHQLRDVGGEGVQQGLLKLLEGT 391
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 369 (135.0 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 73/130 (56%), Positives = 98/130 (75%)
Query: 303 KGSGAEPKTAAAVDNDD-NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
+G G + +D +V+LEKSN++++GPTGSGKTL+A+T+A+ ++VPF I D TTL
Sbjct: 304 RGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTL 363
Query: 362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
TQAGYVGED+ES++ KLL A +NVE AQ G+V++DEVDKI ++ RDV GEGVQ
Sbjct: 364 TQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKIGA-VPGIHQLRDVGGEGVQ 422
Query: 422 QALLKMLEGT 431
Q +LKMLEGT
Sbjct: 423 QGMLKMLEGT 432
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANL----KKGSGAEPKTAAAVDN 317
P P++I + LDK V+GQ+ AKKVL+VAVYNHYKRI+H NL +G+GA +D
Sbjct: 190 PPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHH-NLPQLQNQGAGASNGAGGGLDG 248
Query: 318 DDNVELEKSNVLLMGPTGSGKTL 340
+ + ++L + TG G TL
Sbjct: 249 -----IPRPDLLHI--TGIGHTL 264
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 327 (120.2 bits), Expect = 9.2e-29, P = 9.2e-29
Identities = 62/125 (49%), Positives = 93/125 (74%)
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
A +D +++EKSNVLL+GP+G GKTL+ ++LAR ++VPF I+D T TQAGY+G+D E
Sbjct: 188 AEIDESSQLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGYIGDDAE 247
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
+++LLA A ++VE A++G++ +DE+DKI A ++ RDV G GVQ++LLK+LEGT
Sbjct: 248 VCVHRLLAAANYDVEQAERGIIVLDEIDKIA--AAKVSHGRDVGGSGVQESLLKLLEGTT 305
Query: 433 TKTFA 437
+ A
Sbjct: 306 VQVQA 310
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
TPK + + LD+FV+GQE+AKK+LSVAVYNHY+R+ ++ AE A + +D
Sbjct: 80 TPKSLKQYLDQFVVGQERAKKILSVAVYNHYQRVQELQ-RRQEEAEQLLAKRLRREDIQR 138
Query: 323 LEKSNVLLMGPTGS 336
++ L+G S
Sbjct: 139 RQEEREELLGKHAS 152
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 159 (61.0 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VE+ N+L++GPTG GKT +A+ LA+ NVPF+ +AT T+ GYVG++VESI+ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDL 103
Score = 116 (45.9 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTF 436
+L QA +NVE G+V+IDE+DKI K+ E DVS EGVQ+ LL ++EG+ T
Sbjct: 238 ELKEQAIYNVE--NNGIVFIDEIDKICKRGEVSG--PDVSREGVQRDLLPLIEGSTVSTK 293
Query: 437 AAVSKVSRDNLYIKTSG 453
+ V D++ SG
Sbjct: 294 HGM--VRTDHILFIASG 308
Score = 86 (35.3 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 14/34 (41%), Positives = 27/34 (79%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI L++ +IGQ+KAK+ +++A+ N ++R+
Sbjct: 5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRM 38
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 159 (61.0 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VE+ N+L++GPTG GKT +A+ LA+ NVPF+ +AT T+ GYVG++VESI+ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDL 103
Score = 116 (45.9 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTF 436
+L QA +NVE G+V+IDE+DKI K+ E DVS EGVQ+ LL ++EG+ T
Sbjct: 238 ELKEQAIYNVE--NNGIVFIDEIDKICKRGEVSG--PDVSREGVQRDLLPLIEGSTVSTK 293
Query: 437 AAVSKVSRDNLYIKTSG 453
+ V D++ SG
Sbjct: 294 HGM--VRTDHILFIASG 308
Score = 86 (35.3 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 14/34 (41%), Positives = 27/34 (79%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI L++ +IGQ+KAK+ +++A+ N ++R+
Sbjct: 5 TPREIVSELNRHIIGQDKAKRAVAIALRNRWRRM 38
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 153 (58.9 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D E+ N+L++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++VE I
Sbjct: 40 LDADFRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQI 99
Query: 375 LYKL 378
+ L
Sbjct: 100 IRDL 103
Score = 108 (43.1 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 371 VESILYKLLAQAEFNVEAA----QQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
+E KL+ Q + +A Q G+V++DE+DKI K+ E+ DVS EGVQ+ LL
Sbjct: 223 IEEEAAKLVNQEDLKEQAIELVEQNGIVFLDEIDKICKRGETSG--PDVSREGVQRDLLP 280
Query: 427 MLEGTETKTFAAVSKVSRDNLYIKTSG 453
++EG T + K D++ SG
Sbjct: 281 LVEGCTVTTKHGMVKT--DHILFIASG 305
Score = 85 (35.0 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI LD +IGQ+KAK+ ++VA+ N ++R+
Sbjct: 5 TPREIVHELDAHIIGQKKAKRSVAVALRNRWRRM 38
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 138 (53.6 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
E+ N+L++GPTG GKT +A+ L+ PF+ +AT T+ GYVG DVESI+ L+
Sbjct: 46 EIFPKNILMIGPTGVGKTEIARRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLV 103
Score = 110 (43.8 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 390 QQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSRDNLYI 449
Q G+V+IDE+DKI K+ + + DVS EGVQ+ LL ++EG+ F V D++
Sbjct: 253 QNGIVFIDEIDKIVKREGA--VGADVSREGVQRDLLPLVEGSTV--FTKYGMVKTDHILF 308
Query: 450 KTSG 453
SG
Sbjct: 309 IASG 312
Score = 92 (37.4 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI LDKF+IGQ AK+ +++A+ N ++R+
Sbjct: 4 TPREIVAELDKFIIGQNDAKRAVAIALRNRWRRM 37
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 144 (55.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 39/117 (33%), Positives = 65/117 (55%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
++ N+L++G TG GKT +A+ LA+ + PF+ +A+ T+ G+VG DVES++ + LA
Sbjct: 46 DIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMV-RDLAN 104
Query: 382 AEFNVEAAQQGMVYIDEVDKI--TKKAESL--NISRDVSGEGVQQALLKMLEGTETK 434
A N+ +Q D++D+ K E L + + +S E Q+ LE TK
Sbjct: 105 AALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEK-QEEYKNSLEKMRTK 160
Score = 111 (44.1 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TPKEI K LD +VIGQ+KAKK++++A+ N Y+R+
Sbjct: 4 TPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRM 37
Score = 104 (41.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 346 ARHVNVPFVIADATTL--TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKIT 403
++ V I DA +AG D ESI + L +AE +G+++IDE+DKI
Sbjct: 204 SKKVKKEMKIKDAKNALKNEAGEKILDQESIKSEALKRAE------NEGIIFIDEIDKIA 257
Query: 404 KKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSRDNLYIKTSG 453
+ + N +D S EGVQ+ LL ++EG+ +T + + D++ +G
Sbjct: 258 VSSGNSN-RQDPSKEGVQRDLLPIVEGSNVQT--KIGTLKTDHILFIAAG 304
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 150 (57.9 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++GPTG GKT +A+ LA+ + PFV +AT T+ GYVG DVE ++ L
Sbjct: 47 EIIPKNILMIGPTGVGKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDL--- 103
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISR 413
VE + + MV +++ + KA +L + R
Sbjct: 104 ----VETSLR-MVREEKIKMVEDKAYNLAVER 130
Score = 101 (40.6 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
E+L TP++I + LDK++IGQE AKK ++VA+ N Y+R
Sbjct: 2 ENL-TPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRR 37
Score = 82 (33.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVS 440
Q E A + G+V++DE+DKI + DVS GVQ+ +L ++EG+ T
Sbjct: 258 QREAIKRAEEDGIVFLDEIDKIASTGNTHG--PDVSRGGVQRDILPIVEGSTVLT--KYG 313
Query: 441 KVSRDNLYIKTSG 453
V D++ +G
Sbjct: 314 PVKTDHILFIAAG 326
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 157 (60.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 37/107 (34%), Positives = 63/107 (58%)
Query: 327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
N+L++GPTG GKT LA+ LA+ +N PFV +AT T+ G+ G DV++I+ L+ + N+
Sbjct: 316 NILMIGPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNI 375
Query: 387 EA--AQQGMVYID-EVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
+ A I+ +V+K + + + D+S +++ L K EG
Sbjct: 376 KTKIANSHKASIEADVEK-NVISSLIGLQNDLSAITIEELLKKYREG 421
Score = 108 (43.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 319 DNVELE-KSNVLLMGPTGSG-KTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D+VE+E + + G G +AK L+ P I T + +A + E LY
Sbjct: 424 DSVEIEIEVSSDSKGSLGQAYDENIAKLLSAIDKQPSKIKKVT-IAEAKEIFEKQYRDLY 482
Query: 377 KLLAQA-EFNVEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETK 434
+ + +++A+Q G+V++DE+DKI ES+ D S +GVQ+ LL ++EG
Sbjct: 483 TVSQDVTKLAIQSAEQNGIVFLDEIDKICTSRESIKNGGDASTDGVQRDLLPIVEGCMVS 542
Query: 435 T 435
T
Sbjct: 543 T 543
Score = 94 (38.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
ED P++I GLD++VIGQ AK+ +S+A+ N ++R
Sbjct: 265 EDNLLPRDIVSGLDEYVIGQSDAKRAISIALRNRWRR 301
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 152 (58.6 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++GPTG GKT +++ LA+ PF+ +AT T+ GYVG DVE I+ + LA
Sbjct: 47 EVYPKNILMIGPTGVGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQII-RDLAD 105
Query: 382 AEFNVEAAQQGMVYI-DEVDKITKKAESLNISRDVSGEGVQQALLKM 427
A A Q Y+ DEV KA + ++GE ++ +M
Sbjct: 106 A-----AIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDAREGTREM 147
Score = 116 (45.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 29/88 (32%), Positives = 51/88 (57%)
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
+GE+ + +L L + +EA +Q G+V++DE+DK+ ++++ DVS EGVQ+ LL
Sbjct: 218 IGEEADKLLDDELVN-KTALEAVEQNGIVFLDEIDKVCARSDARGA--DVSREGVQRDLL 274
Query: 426 KMLEGTETKTFAAVSKVSRDNLYIKTSG 453
++EGT T + D++ SG
Sbjct: 275 PLIEGTTVST--KYGPIKTDHILFIASG 300
Score = 92 (37.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
DL TP+EI LD+F+IGQ+ AK+ ++VA+ N ++R
Sbjct: 3 DL-TPREIVSELDRFIIGQKDAKRAVAVALRNRWRR 37
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 155 (59.6 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++V+SI+ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESL 409
+AA + MV + ++K +AE L
Sbjct: 104 ----TDAAVK-MVRVQAIEKNRYRAEEL 126
Score = 112 (44.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 386 VEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSR 444
++A +Q G+V+IDE+DKI K+ ES DVS EGVQ+ LL ++EG T + K
Sbjct: 244 IDAVEQHGIVFIDEIDKICKRGESSG--PDVSREGVQRDLLPLVEGCTVSTKHGMVKT-- 299
Query: 445 DNLYIKTSG 453
D++ SG
Sbjct: 300 DHILFIASG 308
Score = 87 (35.7 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI LDK +IGQ+ AK+ +++A+ N ++R+
Sbjct: 5 TPREIVSELDKHIIGQDNAKRSVAIALRNRWRRM 38
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 153 (58.9 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D E+ N+L++GPTG GKT +A+ LA+ + PF+ +AT T+ GYVG++VE+I
Sbjct: 40 LDKDLRNEVTPKNILMIGPTGVGKTEIARRLAKLAHAPFIKVEATKFTEVGYVGKEVETI 99
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAE 407
+ L A+ ++ MV E+D++ AE
Sbjct: 100 IRDL---ADMAIK-----MVKESEMDRVKHLAE 124
Score = 117 (46.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 386 VEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSR 444
++A +Q G+V+IDE+DKI K+A+S DVS EGVQ+ LL ++EG+ T + K
Sbjct: 243 IDAVEQNGIVFIDEIDKICKRADSSG-GGDVSREGVQRDLLPLVEGSTVSTKHGMIKT-- 299
Query: 445 DNLYIKTSG 453
D++ SG
Sbjct: 300 DHILFIASG 308
Score = 79 (32.9 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI LD ++GQ AK+ +++A+ N ++R+
Sbjct: 5 TPREIVHELDSHIVGQSDAKRAVAIALRNRWRRM 38
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 150 (57.9 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 39/104 (37%), Positives = 61/104 (58%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG++V+SI+ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
++A + +V E+ K +AE DV+ E + ALL
Sbjct: 104 ----TDSAMK-LVRQQEIAKNRARAE------DVAEERILDALL 136
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 386 VEAAQQ-GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSR 444
++A +Q G+V+IDE+DKI KK E DVS EGVQ+ LL ++EG+ T + K
Sbjct: 245 IDAVEQNGIVFIDEIDKICKKGEYSGA--DVSREGVQRDLLPLVEGSTVSTKHGMVKT-- 300
Query: 445 DNLYIKTSG 453
D++ SG
Sbjct: 301 DHILFIASG 309
Score = 81 (33.6 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
TP+EI LD+ +IGQ AK+ +++A+ N ++R+
Sbjct: 5 TPREIVSELDQHIIGQADAKRAVAIALRNRWRRM 38
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 148 (57.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++GPTG GKT +A+ +A+ PF+ +AT T+ GYVG DVESI+ L+
Sbjct: 70 EIIPKNILMIGPTGVGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLVDS 129
Query: 382 AEFNVEAAQQGMVYIDEVDKITKK 405
A V+ Q+ + E ++ K+
Sbjct: 130 AVAQVKD-QKRKQFSKEAEESAKE 152
Score = 104 (41.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSRDNLYIK 450
+GMV+IDE+DKI + E + +V+ EGVQ+ LL +LEGT T V K D++
Sbjct: 280 RGMVFIDEIDKICARTE---VRGEVNREGVQRDLLPLLEGTTVVTKYGVVKT--DHILFV 334
Query: 451 TSG 453
SG
Sbjct: 335 GSG 337
Score = 82 (33.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
PK + LD+FV+GQ+ AKK +++A+ N ++R
Sbjct: 29 PKALVSYLDRFVVGQKLAKKKIAIAIRNRWRR 60
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 142 (55.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 34/101 (33%), Positives = 58/101 (57%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++G TG GKT +A+ LA+ PF+ +AT T+ GYVG DV+SI+ L+
Sbjct: 98 EIIPKNILMIGHTGIGKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDV 157
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQ 422
A N+E ++ +++ K AE++ + V + Q+
Sbjct: 158 A-INLEK-EKSRKFVET--KAKSLAENIILEALVGADASQE 194
Score = 105 (42.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSRDNL 447
A+ G+V++DE+DKI + E I +V+ EGVQ+ LL +LEGT T ++ D++
Sbjct: 292 ASNDGIVFLDEIDKIAARTE---IRGEVNREGVQRDLLPLLEGTSVTT--KYGTITTDHI 346
Query: 448 YIKTSG 453
SG
Sbjct: 347 LFIASG 352
Score = 85 (35.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
TP++I + LD+F+IGQ AK+ +++A+ N ++R
Sbjct: 56 TPQQITQELDRFIIGQADAKRAVAIALRNRWRR 88
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 139 (54.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
E+ N+L++G TG GKT +A+ LA+ PF+ +AT T+ GYVG DV+SI+ L+ +
Sbjct: 47 EIIPKNILMIGHTGVGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLVDR 106
Query: 382 AEFNVEAAQQGMV 394
A V+ + +V
Sbjct: 107 AVLLVKEKYRKVV 119
Score = 112 (44.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/100 (32%), Positives = 59/100 (59%)
Query: 358 ATTLTQAGYV--GEDVESILY--KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISR 413
+TT+ +A + E+ E ++ K++ +A ++ A+ +G+V++DE+DKI + E +
Sbjct: 210 STTVKEAREILLDEETEKLIDEDKIVREA-LHI-ASNEGIVFLDEIDKIAARTE---VRG 264
Query: 414 DVSGEGVQQALLKMLEGTETKTFAAVSKVSRDNLYIKTSG 453
+V+ EGVQ+ LL +LEGT T V+ D++ SG
Sbjct: 265 EVNREGVQRDLLPLLEGTSVST--KYGTVTTDHVLFIASG 302
Score = 80 (33.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/36 (41%), Positives = 28/36 (77%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
DL +PK+I K LD+F++GQ +AK+ ++ A+ + ++R
Sbjct: 3 DL-SPKQITKELDRFIVGQTEAKRAVANALRSRWRR 37
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 160 (61.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 43/142 (30%), Positives = 74/142 (52%)
Query: 327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
N++L GP G+GKT A+T+A+ +PF + +A+ + +G + E L +L A N
Sbjct: 195 NIILYGPPGNGKTNFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFA----NA 250
Query: 387 EAAQQGMVYIDEVDKITKK--AESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVS 440
+A + +++ DE+D I KK AE+LN + D+ + LL ++G E AA +
Sbjct: 251 KALRPAIIFFDEIDAIAKKRRAETLNSASDI----LINILLTQMDGFEKVDDVLLIAATN 306
Query: 441 KVS-RDNLYIKTSGLDSKTLWP 461
++ D ++ D K L P
Sbjct: 307 RIDILDEAILRPGRFDQKILIP 328
>UNIPROTKB|H0YM48 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004487 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 EMBL:AC068213 PANTHER:PTHR11262:SF4 HGNC:HGNC:2088
EMBL:AC013553 ProteinModelPortal:H0YM48 SMR:H0YM48
Ensembl:ENST00000559152 Bgee:H0YM48 Uniprot:H0YM48
Length = 268
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH---ANLKKGSGAEPKTA 312
P PK+I LDK+V+GQ AKKVLSVAVYNHYKRIY+ ANL++ + E +T+
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTS 220
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 121 (47.7 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 50 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 103
Query: 388 AAQQGMVYIDEVDKITKK 405
Q +++IDEVD + ++
Sbjct: 104 ELQPSIIFIDEVDSLLRE 121
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ +LL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 178 QPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 235
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I + +++S S D + LL L+G E TK +
Sbjct: 236 ---EHAPS-IIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMA 291
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 292 TNRIDILDPALLRPGRIDRKIEFP 315
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 251
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAA 438
E A ++++DE+D I + + ES + + D + LL L+G E K A
Sbjct: 252 ---EHAPS-IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
Query: 439 VSKVS-RDNLYIKTSGLDSKTLWP 461
+++ D ++ +D K +P
Sbjct: 308 TNRIDILDQALLRPGRIDRKIEFP 331
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 251
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAA 438
E A ++++DE+D I + + ES + + D + LL L+G E K A
Sbjct: 252 ---EHAPS-IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
Query: 439 VSKVS-RDNLYIKTSGLDSKTLWP 461
+++ D ++ +D K +P
Sbjct: 308 TNRIDILDQALLRPGRIDRKIEFP 331
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 177 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 234
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I + E D + LL L+G E TK +
Sbjct: 235 ---EHAPS-IIFMDEIDSIGSRLEG-GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 289
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 290 NRIDILDSALLRPGRIDRKIEFP 312
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 134 (52.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 165 QPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 222
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I + + +S S D + LL L+G E TK +
Sbjct: 223 ---EHAPS-IIFMDEIDSIGSSRIDSAG-SGDSEVQRTMLELLNQLDGFEPTKNIKIIMA 277
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 278 TNRLDILDPALLRPGRIDRKIEFP 301
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 178 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFIMAR 235
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I + + ES + D + LL L+G E TK +
Sbjct: 236 ---EHAPS-IIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMC 291
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 292 TNRIDILDPALLRPGRIDRKIEFP 315
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 239
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 240 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 295
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 296 NRIDILDSALLRPGRIDRKIEFP 318
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 188 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 245
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 246 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 301
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 302 NRIDILDSALLRPGRIDRKIEFP 324
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 190 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 247
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 248 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 303
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 304 NRIDILDSALLRPGRIDRKIEFP 326
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 190 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 247
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK +
Sbjct: 248 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 303
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 304 NRIDILDSALLRPGRIDRKIEFP 326
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H F+ + L Q ++GE + +L A
Sbjct: 208 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 265
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I + D + LL L+G E TK +
Sbjct: 266 ---EHAPS-IIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 321
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D+ ++ +D K +P
Sbjct: 322 NRIDILDSALLRPGRIDRKIEFP 344
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H F+ + L Q ++GE + +L A
Sbjct: 192 QPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 249
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I + D + LL L+G E TK +
Sbjct: 250 ---EHAPS-IIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 305
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 306 NRIDILDPALLRPGRIDRKIEFP 328
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
V++ K VL++GP G GKTL+AK +A VPF ++ + YVG + + +L +
Sbjct: 182 VKMPKG-VLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEI-YVGMGAKRVR-ELFS 238
Query: 381 QAEFNVEAAQQGMVYIDEVDKITK-KAESLNISRDVSGEGVQQALLKMLEGTETKT---- 435
+A+ + +V+IDE+D + K + E N+ RD + + Q LL ++G E +
Sbjct: 239 KAKMMAPS----IVFIDEIDAVGKARGEMSNVERDST---LNQ-LLTQMDGFEDNSGVIV 290
Query: 436 FAAVSKVS-RDNLYIKTSGLDSK 457
AA +K+ D +++ D +
Sbjct: 291 IAATNKIELMDPALLRSGRFDRR 313
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H F+ + L Q ++GE ++ +L A
Sbjct: 181 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEG-SRMVRELFVMAR 238
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I + + ES D + LL L+G E TK +
Sbjct: 239 ---EHAPS-IIFMDEIDSIGSSRIES-GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 293
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 294 TNRIDILDPALLRPGRIDRKIEFP 317
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/159 (30%), Positives = 72/159 (45%)
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P A D + K L+ GP G+GKTLLA+ A N F+ A L Q Y+G
Sbjct: 200 PMKRADKFKDMGIRAPKG-ALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQM-YIG 257
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKM 427
E KL+ A + +++IDE+D I TK+ +S S D + LL
Sbjct: 258 EGA-----KLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK-SGDREVQRTMLELLNQ 311
Query: 428 LEGTET----KTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
L+G + K AA ++V D +++ LD K +P
Sbjct: 312 LDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFP 350
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 212 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 269
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I +++ E + +V + LL L+G E T+ +
Sbjct: 270 ---EHAPS-IIFMDEIDSIGSQRIEGEHGDSEV--QRTMMELLNQLDGFESTQNIKVIMC 323
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 324 TNRIDILDEALLRPGRIDRKIEFP 347
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q Y+GE ++ +L A
Sbjct: 212 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 269
Query: 384 FNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSK 441
E A ++++DE+D I +++ E + +V + LL L+G E T+ +
Sbjct: 270 ---EHAPS-IIFMDEIDSIGSQRIEGEHGDSEV--QRTMMELLNQLDGFESTQNIKVIMC 323
Query: 442 VSR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 324 TNRIDILDEALLRPGRIDRKIEFP 347
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 47/144 (32%), Positives = 70/144 (48%)
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P T V NV+ + VLL GP G GKT++A A + VPF+ A ++ +G G
Sbjct: 184 PMTRPQVYLASNVQPPRG-VLLHGPPGCGKTMIANAFAAELGVPFISISAPSIV-SGMSG 241
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM- 427
E E L + +A+ +++IDE+D IT K E N R++ V Q L M
Sbjct: 242 ES-EKALREHFEEAKRLAPC----LIFIDEIDAITPKRE--NSQREMEKRIVAQLLTCMD 294
Query: 428 ---LEGTETKTFAAVSKVSR-DNL 447
LE T+ K ++ +R D+L
Sbjct: 295 DLALEKTDGKPVIVLAATNRPDSL 318
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 149 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 203
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 204 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 261
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 262 ETLDPALIRPGRIDRKIEFP 281
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTLLAK +A + F+ + A+ + Y+GE ++ ++ A A+ +
Sbjct: 209 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDK-YIGESAR-LIREMFAYAKEH-- 264
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKVS 443
+ ++++DEVD I + S S D + LL ++G +T K A ++
Sbjct: 265 --EPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPD 322
Query: 444 R-DNLYIKTSGLDSK 457
D ++ LD K
Sbjct: 323 TLDPALLRAGRLDRK 337
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 119 (46.9 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 428
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 429 ELQPSIIFIDEVDSL 443
Score = 51 (23.0 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
++PS +P PAP +G A P+ ++ YYF
Sbjct: 25 ASPS--APSGPAPPAPPAGAAAAAAASPHKRNLYYF 58
Score = 41 (19.5 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N V G TG SG
Sbjct: 208 VYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSG 259
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ V+L GP G+GKTLLA+ +A H + F+ L Q Y+GE ++ +L A
Sbjct: 181 QPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQK-YIGEG-SRMVRELFVMAR 238
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVSKV 442
E A ++++DE+D I + D + LL L+G ET K +
Sbjct: 239 ---EHAPS-IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMAT 294
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 295 NRLDILDPALLRPGRIDRKIEFP 317
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 197 VLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 254
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG----TETKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G T K A ++
Sbjct: 255 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRAD 310
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 311 TLDPALLRPGRLDRKIEFP 329
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTL+A+ A N F+ L Q ++G+ KL+ A +
Sbjct: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGA-----KLVRDAFLLAK 260
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
+++IDE+D I TK+ +S +S D + LL L+G + K AA ++
Sbjct: 261 EKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 319
Query: 443 S-RDNLYIKTSGLDSKTLWP 461
D +++ LD K +P
Sbjct: 320 DILDPALMRSGRLDRKIEFP 339
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 128 (50.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D ++ K +L GP G+GKTLLAK A NVPF+ + + +VG +
Sbjct: 126 DLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-D 183
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
L A A N +++IDE+D + +K N E LL ++G T T
Sbjct: 184 LFALARKNAPC----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 237
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTLLAK +A + F+ + A+ + Y+GE I+ ++ A A+ +
Sbjct: 218 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDK-YIGESAR-IIREMFAYAKEH-- 273
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
+ ++++DEVD I + S S D + LL ++G + TK A ++
Sbjct: 274 --EPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 331
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K P
Sbjct: 332 TLDPALLRPGRLDRKVEIP 350
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 220 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 274
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 275 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 332
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 333 ETLDPALIRPGRIDRKIEFP 352
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 275
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 276 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 333
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 334 ETLDPALIRPGRIDRKIEFP 353
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 119 (46.9 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 429
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 430 ELQPSIIFIDEVDSL 444
Score = 51 (23.0 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N V+ GPTG SG
Sbjct: 209 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVMKTGPTGLSG 260
Score = 40 (19.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSNLSPPVPAP 105
P++ SPP P P
Sbjct: 97 PASASPPAPVP 107
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 119 (46.9 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 396
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 397 ELQPSIIFIDEVDSL 411
Score = 46 (21.3 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 265 KEICKGLDKFVIGQ----EKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+E+ KG+ V GQ E+A+++ + + N L + SGA PK + + N
Sbjct: 151 EELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLE-SGAVPKKKDPLTHASN 209
Query: 321 VELEKSNVLLMGPTG-SG 337
V+ G TG SG
Sbjct: 210 SLPRSKTVMKSGSTGLSG 227
Score = 44 (20.5 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
++P+ PP PA + G P+ ++ YYF
Sbjct: 16 ASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYF 51
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 95 PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
P+ SP PAP G GG +A ++ K A+ +
Sbjct: 95 PAPASPSTPAP---GPGG-EAESVRVFHKQAFEY 124
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 119 (46.9 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 396
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 397 ELQPSIIFIDEVDSL 411
Score = 46 (21.3 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 265 KEICKGLDKFVIGQ----EKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+E+ KG+ V GQ E+A+++ + + N L + SGA PK + + N
Sbjct: 151 EELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLE-SGAVPKKKDPLTHASN 209
Query: 321 VELEKSNVLLMGPTG-SG 337
V+ G TG SG
Sbjct: 210 SLPRSKTVMKSGSTGLSG 227
Score = 44 (20.5 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
++P+ PP PA + G P+ ++ YYF
Sbjct: 16 ASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYF 51
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 95 PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
P+ SP PAP G GG +A ++ K A+ +
Sbjct: 95 PAPASPSTPAP---GPGG-EAESVRVFHKQAFEY 124
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H F+ + L Q ++GE ++ +L A
Sbjct: 176 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEG-SRMVRELFVMAR 233
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I A + D + LL L+G E TK +
Sbjct: 234 ---EHAPS-IIFMDEIDSIGS-ARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 288
Query: 443 SR----DNLYIKTSGLDSKTLWP 461
+R D ++ +D K +P
Sbjct: 289 NRIDVLDQALLRPGRIDRKIEFP 311
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 41/141 (29%), Positives = 61/141 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI--LYKLLAQAEFN 385
VLL GP G GKT+LAK +A H F+ + Q Y+GE + L++L Q N
Sbjct: 189 VLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK-YLGEGPRMVRDLFRLAKQ---N 244
Query: 386 VEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG----TETKTFAAVSK 441
+++IDE+D I K D + + LL ++G T K A ++
Sbjct: 245 ----SPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNR 300
Query: 442 VSR-DNLYIKTSGLDSKTLWP 461
D ++ LD K P
Sbjct: 301 ADTLDPALLRPGRLDRKIELP 321
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 129 (50.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 259 VLLYGPPGTGKTLMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKNSP 316
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E N +V V Q LL +++G + ++ V + +R N
Sbjct: 317 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVMAATNRPN 369
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 44/140 (31%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 275
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D + TK+ +S N + + LL L+G ++ K A +++
Sbjct: 276 HAPS-IVFIDEIDAVGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 333
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 334 ETLDPALIRPGRIDRKIEFP 353
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 48/160 (30%), Positives = 81/160 (50%)
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P T + D ++ K V+L GP G+GKTLLAK +A + F+ + L Q Y+G
Sbjct: 212 PLTHPELYEDIGIKPPKG-VILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK-YLG 269
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNIS-RDVSGEGVQQALLK 426
D ++ ++ AE E A +V+IDE+D + TK+ E+ + R++ ++ LL
Sbjct: 270 -DGPKLVREMFKVAE---EHAPS-IVFIDEIDAVGTKRYEATSGGEREIQRTMLE--LLN 322
Query: 427 MLEGTET----KTFAAVSKV-SRDNLYIKTSGLDSKTLWP 461
L+G ++ K A +++ S D I+ +D K P
Sbjct: 323 QLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP 362
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 48/160 (30%), Positives = 81/160 (50%)
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P T + D ++ K V+L GP G+GKTLLAK +A + F+ + L Q Y+G
Sbjct: 212 PLTHPELYEDIGIKPPKG-VILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK-YLG 269
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNIS-RDVSGEGVQQALLK 426
D ++ ++ AE E A +V+IDE+D + TK+ E+ + R++ ++ LL
Sbjct: 270 -DGPKLVREMFKVAE---EHAPS-IVFIDEIDAVGTKRYEATSGGEREIQRTMLE--LLN 322
Query: 427 MLEGTET----KTFAAVSKV-SRDNLYIKTSGLDSKTLWP 461
L+G ++ K A +++ S D I+ +D K P
Sbjct: 323 QLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP 362
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 121 (47.7 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 292 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 345
Query: 388 AAQQGMVYIDEVDKITKK 405
Q +++IDEVD + ++
Sbjct: 346 ELQPSIIFIDEVDSLLRE 363
Score = 43 (20.2 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLM-GPTG-SG 337
VYN + N L+ SGA PK + + N L +S ++ G TG SG
Sbjct: 125 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHPSN-SLPRSKAIMKTGSTGLSG 176
Score = 41 (19.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 86 KHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNC 122
K D L ++PSN P A GS G + P+C
Sbjct: 148 KRKDPL-THPSNSLPRSKAIMKTGSTGLSGHHRAPSC 183
Score = 40 (19.1 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSNLSPPVPAP 105
P++ SPP P P
Sbjct: 13 PASASPPAPVP 23
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ V+L GP G+GKTLLA+ +A H F+ + L Q Y+GE ++ +L A
Sbjct: 177 QPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQK-YIGEG-SRMVRELFVMAR 234
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAV 439
E A ++++DE+D I + D + LL L+G E+ K A
Sbjct: 235 ---EHAPS-IIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMAT 290
Query: 440 SKVS-RDNLYIKTSGLDSKTLWP 461
+++ D ++ +D K +P
Sbjct: 291 NRLDILDPALLRPGRIDRKIEFP 313
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKT+LAK +A H + F+ + Q Y+GE ++ + A N
Sbjct: 187 VLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQK-YLGEGPR-LVRDVFRLARENSP 244
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 245 A----IIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQD 300
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 301 TLDPALLRPGRLDRKIEFP 319
>WB|WBGene00003818 [details] [associations]
symbol:nsf-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 128 (50.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 41/111 (36%), Positives = 58/111 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G+GKTL+A+ + + +N P ++ L + YVGE ES + KL A AE
Sbjct: 333 ILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-ESNVRKLFADAEEE 389
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
A G+ + DE+D I K+ S+ S V V Q L KM +G E
Sbjct: 390 WRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKM-DGVE 439
>UNIPROTKB|Q94392 [details] [associations]
symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 128 (50.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 41/111 (36%), Positives = 58/111 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G+GKTL+A+ + + +N P ++ L + YVGE ES + KL A AE
Sbjct: 333 ILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-ESNVRKLFADAEEE 389
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
A G+ + DE+D I K+ S+ S V V Q L KM +G E
Sbjct: 390 WRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKM-DGVE 439
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 120 (47.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 133 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 190
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE-TKTFAAVSKV 442
E A ++++DE+D I D + LL L+G E TK + +
Sbjct: 191 ---EHAPS-IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVMWHL 246
Query: 443 SRD 445
D
Sbjct: 247 RED 249
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + AT + +G GE E L +L QA N
Sbjct: 295 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV-SGVSGES-EQKLRELFEQAVSNAP 352
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q L M + T AA ++V
Sbjct: 353 C----VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNTTAATARV 398
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + AT + +G GE E L +L QA N
Sbjct: 295 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV-SGVSGES-EQKLRELFEQAVSNAP 352
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q L M + T AA ++V
Sbjct: 353 C----VLFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNTTAATARV 398
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G+GKTLLA+ A N F+ L Q ++G+ K++ A FN+
Sbjct: 223 VLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQM-FIGDGA-----KMVRDA-FNLA 275
Query: 388 AAQQ-GMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSK 441
+ +++IDE+D I TK+ +S +S D + LL L+G T K AA ++
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDS-ELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNR 334
Query: 442 VSR-DNLYIKTSGLDSKTLWP 461
D +++ LD K P
Sbjct: 335 PDTLDPALLRSGRLDRKIELP 355
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G+GKTLLA+ A N F+ L Q ++G+ K++ A FN+
Sbjct: 223 VLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQM-FIGDGA-----KMVRDA-FNLA 275
Query: 388 AAQQ-GMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSK 441
+ +++IDE+D I TK+ +S +S D + LL L+G T K AA ++
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDS-ELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNR 334
Query: 442 VSR-DNLYIKTSGLDSKTLWP 461
D +++ LD K P
Sbjct: 335 PDTLDPALLRSGRLDRKIELP 355
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 120 (47.3 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 17 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 74
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 75 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 104
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 159 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 212
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 213 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 271
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 272 VKVIAATNRVDILDPALLRSGRLDRKIEFP 301
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 163 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 216
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 217 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 275
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 276 VKVIAATNRVDILDPALLRSGRLDRKIEFP 305
>UNIPROTKB|B4DFA2 [details] [associations]
symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006813 "potassium ion transport"
evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
Length = 644
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 162 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 218
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 219 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 277
Query: 441 KVSRDNL 447
+R +L
Sbjct: 278 MTNRPDL 284
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 171 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 224
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 225 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 283
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 284 VKVIAATNRVDILDPALLRSGRLDRKIEFP 313
>UNIPROTKB|I3L0N3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
Length = 739
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 251 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 307
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 308 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 366
Query: 441 KVSRDNL 447
+R +L
Sbjct: 367 MTNRPDL 373
>UNIPROTKB|P46459 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
"positive regulation of receptor recycling" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
GermOnline:ENSG00000073969 Uniprot:P46459
Length = 744
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|P18708 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
EvolutionaryTrace:P18708 Uniprot:P18708
Length = 744
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>MGI|MGI:104560 [details] [associations]
symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] [GO:0017157 "regulation of
exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
GermOnline:ENSMUSG00000034187 Uniprot:P46460
Length = 744
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>RGD|621594 [details] [associations]
symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
"Rattus norvegicus" [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
[GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
density" evidence=IDA;TAS] [GO:0015031 "protein transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
[GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
"ATP-dependent protein binding" evidence=IPI] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
Length = 744
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|F1LQ81 [details] [associations]
symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
ArrayExpress:F1LQ81 Uniprot:F1LQ81
Length = 744
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|F1P6Z3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
"syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
Length = 745
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 257 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 313
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 314 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 372
Query: 441 KVSRDNL 447
+R +L
Sbjct: 373 MTNRPDL 379
>UNIPROTKB|F1MZU2 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
Length = 746
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 213 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 266
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 267 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 325
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 326 VKVIAATNRVDILDPALLRSGRLDRKIEFP 355
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 213 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 266
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 267 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 325
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 326 VKVIAATNRVDILDPALLRSGRLDRKIEFP 355
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 213 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 266
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 267 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 325
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 326 VKVIAATNRVDILDPALLRSGRLDRKIEFP 355
>ZFIN|ZDB-GENE-050808-1 [details] [associations]
symbol:nsfb "N-ethylmaleimide-sensitive factor b"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-050808-1 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
KO:K06027 HOVERGEN:HBG000324 EMBL:DQ022212 IPI:IPI00862410
RefSeq:NP_001019625.1 UniGene:Dr.94035 ProteinModelPortal:Q4U0S6
SMR:Q4U0S6 GeneID:554200 KEGG:dre:554200 CTD:554200
NextBio:20880726 Uniprot:Q4U0S6
Length = 747
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTL+A+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLFGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
+ A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QKRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|F1RRS3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:CU928092 Ensembl:ENSSSCT00000018852 Uniprot:F1RRS3
Length = 752
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 216 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 269
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 270 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 328
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 329 VKVIAATNRVDILDPALLRSGRLDRKIEFP 358
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 216 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 269
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 270 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 328
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 329 VKVIAATNRVDILDPALLRSGRLDRKIEFP 358
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 220 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 273
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 274 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 332
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 333 VKVIAATNRVDILDPALLRSGRLDRKIEFP 362
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKT+LA LA + VPF+ A ++ +G GE E + ++ +A+
Sbjct: 211 VLLHGPPGCGKTMLANALANELGVPFISISAPSIV-SGMSGES-EKKVREVFEEAK---- 264
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM----LEGTETKTFAAVSKVS 443
+ +++IDE+D +T K ES R++ V Q L M E T+ K + +
Sbjct: 265 SLAPCLMFIDEIDAVTPKRESAQ--REMERRIVAQFLTCMDELSFEKTDGKPVLVIGATN 322
Query: 444 R-DNL 447
R D+L
Sbjct: 323 RPDSL 327
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 230 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 283
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 284 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 342
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 343 VKVIAATNRVDILDPALLRSGRLDRKIEFP 372
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP GSGKTL+A+ +A F + + + GE ES L K +AE N
Sbjct: 244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 301
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
+ +++IDE+D I K E N +V V Q LL +++G +++ V +R N
Sbjct: 302 S----IIFIDEIDSIAPKREKTN--GEVERRIVSQ-LLTLMDGLKSRAHVIVMGATNRPN 354
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP GSGKTL+A+ +A F + + + GE ES L K +AE N
Sbjct: 244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 301
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
+ +++IDE+D I K E N +V V Q LL +++G +++ V +R N
Sbjct: 302 S----IIFIDEIDSIAPKREKTN--GEVERRIVSQ-LLTLMDGLKSRAHVIVMGATNRPN 354
>UNIPROTKB|E2RFV4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AAEX03006344 Ensembl:ENSCAFT00000021411
Uniprot:E2RFV4
Length = 811
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTLLA+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 315 ILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 371
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 372 QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 430
Query: 441 KVSRDNL 447
+R +L
Sbjct: 431 MTNRPDL 437
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+L+ GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 261 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKNSP 318
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E N +V V Q LL +++G + ++ V + +R N
Sbjct: 319 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVMAATNRPN 371
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 178 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 231
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG----TET 433
L+ A + +++IDE+D I K + D + LL L+G T+
Sbjct: 232 LVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQV 291
Query: 434 KTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 292 KVIAATNRVDILDPALLRSGRLDRKIEFP 320
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+L+ GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 262 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKNSP 319
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E N +V V Q LL +++G + ++ V + +R N
Sbjct: 320 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVMAATNRPN 372
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 192 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 249
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDEVD I D + + LL ++G + K A ++
Sbjct: 250 A----IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 306 TLDPALLRPGRLDRKIEFP 324
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 251 VLMYGPPGTGKTLMARAVANETGAFFFLINGPEV-MSKMAGES-ESNLRKAFEEAEKNAP 308
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FAAVSKVSRDN 446
A +++IDE+D I K + N +V V Q LL +++G + ++ ++ +R N
Sbjct: 309 A----IIFIDEIDSIAPKRDKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVIAATNRPN 361
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 39/108 (36%), Positives = 54/108 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL GP G+GKTLLAK +A V+ F+ L Y GE ES + + +A
Sbjct: 524 VLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY-GES-ESNIRDIFDKAR---- 577
Query: 388 AAQQGMVYIDEVDKITK-KAESLNISRDVSGEGVQQALLKMLEGTETK 434
AA +V++DE+D I K + SL + S V Q L +M +G K
Sbjct: 578 AAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEM-DGMNAK 624
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G+GKTLLA+ A N ++ L Q ++G+ KL+ A F +
Sbjct: 205 VLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQM-FIGDGA-----KLVRDA-FAL- 256
Query: 388 AAQQG--MVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVS 440
A ++G +++IDE+D I TK+ +S +S D + LL L+G + K AA +
Sbjct: 257 AKEKGPTIIFIDELDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATN 315
Query: 441 KVS-RDNLYIKTSGLDSKTLWP 461
++ D +++ LD K +P
Sbjct: 316 RIDILDPALLRSGRLDRKIEFP 337
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTL+A+ A N F+ L Q ++G+ KL+ A +
Sbjct: 208 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGA-----KLVRDAFQLAK 261
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
+++IDE+D I TK+ +S +S D + LL L+G + K AA ++
Sbjct: 262 EKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRA 320
Query: 443 S-RDNLYIKTSGLDSKTLWP 461
D +++ LD K +P
Sbjct: 321 DILDPALMRSGRLDRKIEFP 340
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL+GP GSGKT+LA+ +A NVP++ + YVG+ + I +L A A
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHAR---- 238
Query: 388 AAQQGMVYIDEVDKITKKAESLNIS 412
+ +V+IDE+D I K S +++
Sbjct: 239 SVAPSIVFIDEIDAIGGKRSSGSVN 263
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL+GP GSGKT+LA+ +A NVP++ + YVG+ + I +L A A
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHAR---- 238
Query: 388 AAQQGMVYIDEVDKITKKAESLNIS 412
+ +V+IDE+D I K S +++
Sbjct: 239 SVAPSIVFIDEIDAIGGKRSSGSVN 263
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L GP G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE +
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAEEHGP 279
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
+ +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 280 S----IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/111 (33%), Positives = 58/111 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAE-- 383
+LL GP G+GKTL+A+ + + +N P ++ L + YVG+ E++ KL A AE
Sbjct: 307 ILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNK--YVGQSEENVR-KLFADAERE 363
Query: 384 FNVEAAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
+ + G+ + DE+D I KK S V + V Q L KM +G +
Sbjct: 364 YRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKM-DGVD 413
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
N N K +LL GP G GKTLLAK +A F+ L + GE E+ +
Sbjct: 961 NKFNSNYNKG-ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWF-GES-EANVR 1017
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG-TETKT 435
L +A AA +++ DE+D + K+ S N + D S + Q L + ++G E KT
Sbjct: 1018 DLFDKAR----AASPCIIFFDEIDSLAKERNS-NTNNDASDRVINQILTE-IDGINEKKT 1071
Query: 436 FAAVSKVSRDNLYIK 450
++ +R ++ K
Sbjct: 1072 IFIIAATNRPDILDK 1086
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
N N K +LL GP G GKTLLAK +A F+ L + GE E+ +
Sbjct: 961 NKFNSNYNKG-ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWF-GES-EANVR 1017
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG-TETKT 435
L +A AA +++ DE+D + K+ S N + D S + Q L + ++G E KT
Sbjct: 1018 DLFDKAR----AASPCIIFFDEIDSLAKERNS-NTNNDASDRVINQILTE-IDGINEKKT 1071
Query: 436 FAAVSKVSRDNLYIK 450
++ +R ++ K
Sbjct: 1072 IFIIAATNRPDILDK 1086
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K A+ E N
Sbjct: 246 ILLFGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKMSGES-ESNLRKAFAECEKNSP 303
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G +T+ V + +R N
Sbjct: 304 A----ILFIDEIDAIAPKREKAH--GEVEKRIVSQ-LLTLMDGLKTRAHVVVIAATNRPN 356
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K A+ E N
Sbjct: 246 ILLFGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKMSGES-ESNLRKAFAECEKNSP 303
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G +T+ V + +R N
Sbjct: 304 A----ILFIDEIDAIAPKREKAH--GEVEKRIVSQ-LLTLMDGLKTRAHVVVIAATNRPN 356
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 201 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 258
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 259 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 314
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 315 TLDPALLRPGRLDRKIEFP 333
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 316 TLDPALLRPGRLDRKIEFP 334
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL+GP G+GKTLLAK +A VPF + + +VG + L QA+ N
Sbjct: 195 ILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGASRVR-DLFDQAKKNAP 252
Query: 388 AAQQGMVYIDEVDKITK-KAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV 439
+++IDE+D + + + L D + + Q L++M +G +T T V
Sbjct: 253 C----IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQILVEM-DGFDTDTSVIV 300
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
L+ GP G+GKTLLA+ A N F+ A L Q ++G+ KL+ A +
Sbjct: 223 LMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQM-FIGDGA-----KLVRDAFALAKE 276
Query: 389 AQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKVS 443
+++IDE+D I TK+ +S D + LL L+G + K AA ++V
Sbjct: 277 KSPAIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFSSDDRVKVIAATNRVD 335
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D +++ LD K +P
Sbjct: 336 TLDPALLRSGRLDRKLEFP 354
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTL+AK++A F + ++LT +VG D E ++ L A A
Sbjct: 286 VLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSK-WVG-DAEKLVKTLFAVAA---- 339
Query: 388 AAQQGMVYIDEVDKITKK 405
A Q +++IDEVD + K
Sbjct: 340 AHQPAIIFIDEVDSLLSK 357
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 121 (47.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 428
Query: 388 AAQQGMVYIDEVDKITKK 405
Q +++IDEVD + ++
Sbjct: 429 ELQPSIIFIDEVDSLLRE 446
Score = 43 (20.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLM-GPTG-SG 337
VYN + N L+ SGA PK + + N L +S ++ G TG SG
Sbjct: 208 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHPSN-SLPRSKAIMKTGSTGLSG 259
Score = 41 (19.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 86 KHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNC 122
K D L ++PSN P A GS G + P+C
Sbjct: 231 KRKDPL-THPSNSLPRSKAIMKTGSTGLSGHHRAPSC 266
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSNLSPPVPAP 105
P++ SPP P P
Sbjct: 96 PASASPPAPVP 106
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 132 (51.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 39/100 (39%), Positives = 54/100 (54%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP+G GKTLLAK +A + VP AT +T +G GE E+ + L + N
Sbjct: 253 ILLHGPSGCGKTLLAKAIAGELKVPLFAISATEIT-SGVSGES-EARVRTLFS----NAI 306
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
A +++IDE+D I K ES S+D+ V Q L M
Sbjct: 307 AQAPCIIFIDEIDAIAPKRESA--SKDMERRIVSQLLTCM 344
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 302 KKGSGAEPKTAAAVDNDDNVELEKSNVL 329
KK + + + +D + ++L +SN+L
Sbjct: 4 KKYTSGQNENEKLMDRIEKLDLSESNIL 31
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 41/115 (35%), Positives = 62/115 (53%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL+G G+GKTLLAK +A +VPF+ A+ + YVG + L A+A+ E
Sbjct: 365 VLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVEL-YVGMGASRVR-DLFARAK--KE 420
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
A +++IDE+D + K + R VS + +Q L ++L TE F + S V
Sbjct: 421 APS--IIFIDEIDAVAKSRDGK--FRMVSNDEREQTLNQLL--TEMDGFDSSSAV 469
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTL A+TLA+ +PFV A T + G + + ++ + A N
Sbjct: 529 VLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGA---AKINEMFSIARRNAP 585
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
A V++DE+D I + + +D +AL+ L+G + KT
Sbjct: 586 A----FVFVDEIDAIAGR----HARKDPRRRATFEALIAQLDGEKEKT 625
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A TLT YVGE E ++ L A A
Sbjct: 331 LLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSK-YVGEG-EKLVRALFAVAR---- 384
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDE+D +
Sbjct: 385 ELQPSIIFIDEIDSL 399
>UNIPROTKB|E1C646 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00821151
Ensembl:ENSGALT00000040844 ArrayExpress:E1C646 Uniprot:E1C646
Length = 744
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTL+A+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|E1BQU4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00589241
Ensembl:ENSGALT00000001581 ArrayExpress:E1BQU4 Uniprot:E1BQU4
Length = 745
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTL+A+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>UNIPROTKB|E1C649 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00823263
Ensembl:ENSGALT00000040841 ArrayExpress:E1C649 Uniprot:E1C649
Length = 747
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNV--PFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G GKTL+A+ + + +N P V+ L + YVGE E+ + KL A AE
Sbjct: 256 ILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNK--YVGES-EANIRKLFADAEEE 312
Query: 386 VE--AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET-KTFAAVS 440
A G+ + DE+D I K+ S+ S V V Q LL ++G E +
Sbjct: 313 QRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQ-LLSKIDGVEQLNNILVIG 371
Query: 441 KVSRDNL 447
+R +L
Sbjct: 372 MTNRPDL 378
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL+GP G+GKTLLA+ +A VPF A+ + +VG I L A N
Sbjct: 370 VLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEL-FVGRGAARIR-DLFNAARKN-- 425
Query: 388 AAQQGMVYIDEVDKIT-KKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + K+ S N RD + + Q L +M +G E+ T
Sbjct: 426 --SPSIIFIDELDAVGGKRGRSFNDERD---QTLNQLLTEM-DGFESDT 468
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L G G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE N
Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQK-YLG-DGPKMVRELFRVAEENAP 282
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
+ +V+IDE+D + TK+ +S N + + LL L+G ++ K A +++
Sbjct: 283 S----IVFIDEIDAVGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRI 337
Query: 443 -SRDNLYIKTSGLDSKTLWP 461
S D I+ +D K +P
Sbjct: 338 ESLDPALIRPGRIDRKIEFP 357
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 119 (46.9 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 386 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 439
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 440 ELQPSIIFIDEVDSL 454
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N V+ G TG SG
Sbjct: 219 VYNDSTNLTCRNGHLQSESGAVPKRKDPLTHTSNSLPRSKTVMKTGSTGLSG 270
Score = 40 (19.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSNLSPPVPAP 105
P++ SPP P P
Sbjct: 107 PASASPPAPVP 117
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
L +S +LL GP G+GKTLLAK +A ++ F+ L YVG+ E++ ++ A+A
Sbjct: 325 LRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEENVR-EVFARA 382
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSG--EGVQQALLKMLEGTE-TKTFAAV 439
AA +++ DE+D + A S S D G + V LL L+G T+ +
Sbjct: 383 R----AAAPCIIFFDELDSL---APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVI 435
Query: 440 SKVSRDNL 447
+R +L
Sbjct: 436 GATNRPDL 443
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR V E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRVKAE 332
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 121 (47.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + A + +G GE E L +L QA N
Sbjct: 195 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRELFEQAVSNAP 252
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q L M + AA ++V
Sbjct: 253 C----IIFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNNVAATARV 298
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 99 SPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
S P+ PA D GG+ ++ P+ K +F
Sbjct: 53 SIPLKTPAKDSEGGW-FIDKTPSVKKDSFF 81
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 120 (47.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 39/139 (28%), Positives = 64/139 (46%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAKT+A H+ F+ + Y+GE I++ + + N
Sbjct: 151 VLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHK-YLGEGPR-IIWDVFHLDKENAP 208
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVS-KV 442
A +++IDE+D I K D + + LL ++G + K A + K
Sbjct: 209 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKD 264
Query: 443 SRDNLYIKTSGLDSKTLWP 461
+ D ++ LD K +P
Sbjct: 265 TLDPTLLRPGHLDHKIEFP 283
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 265 KEICKGLDK-FVIGQEKAKKVLSV 287
K+ K L K F+ QEK K++ S+
Sbjct: 11 KDEQKNLKKEFLHAQEKVKQIQSI 34
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 208 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 261
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D TK+ +S D + LL L+G T+
Sbjct: 262 LVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 320
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 321 VKVIAATNRVDILDPALLRSGRLDQKIEFP 350
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 43/141 (30%), Positives = 73/141 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L G G+GKTLLAK +A + F+ + L Q Y+G D ++ +L A+ E
Sbjct: 221 VILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAD---E 275
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNIS-RDVSGEGVQQALLKMLEG----TETKTFAAVSK 441
A +V+IDE+D + TK+ +S + R++ ++ LL L+G T+ K A ++
Sbjct: 276 CAPS-IVFIDEIDAVGTKRYDSQSGGEREIQRTMLE--LLNQLDGFDARTDVKVIMATNR 332
Query: 442 VSR-DNLYIKTSGLDSKTLWP 461
+ D I+ +D K +P
Sbjct: 333 IETLDPALIRPGRIDRKIEFP 353
>UNIPROTKB|Q7QBW0 [details] [associations]
symbol:spas "Spastin" species:7165 "Anopheles gambiae"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005815 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 HSSP:O75351 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:AAAB01008859
RefSeq:XP_312634.5 GeneID:1273633 KEGG:aga:AgaP_AGAP002334
VectorBase:AGAP002334 CTD:1273633 KO:K13254 OrthoDB:EOG44XGXW
PhylomeDB:Q7QBW0 HAMAP:MF_03021 Uniprot:Q7QBW0
Length = 827
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTLLA+ +A + F A TLT YVG D E ++ L A A
Sbjct: 588 LLLFGPPGNGKTLLARAVATECSATFFSISAATLTSK-YVG-DGEKLVRALFAVAR---- 641
Query: 388 AAQQGMVYIDEVDKITKKAES 408
Q +++IDEVD + + S
Sbjct: 642 ELQPSIIFIDEVDSVLSERSS 662
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKT+L K +A F+ + + Q Y+GE + + A N
Sbjct: 192 VLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQK-YLGEGPRMVR-DVFRLARENSP 249
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG-TETKTFAAVSKVSR-D 445
A +++IDE+D I K D + + LL ++G +T T + +R D
Sbjct: 250 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRAD 305
Query: 446 NL---YIKTSGLDSKTLWP 461
L ++ LD K +P
Sbjct: 306 TLDPALLRPGRLDRKIEFP 324
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKT+L K +A F+ + + Q Y+GE + + A N
Sbjct: 192 VLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQK-YLGEGPRMVR-DVFRLARENSP 249
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG-TETKTFAAVSKVSR-D 445
A +++IDE+D I K D + + LL ++G +T T + +R D
Sbjct: 250 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRAD 305
Query: 446 NL---YIKTSGLDSKTLWP 461
L ++ LD K +P
Sbjct: 306 TLDPALLRPGRLDRKIEFP 324
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 43/115 (37%), Positives = 61/115 (53%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + AT + +G GE E L +L QA V
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIV-SGVSGES-EQKLRELFEQA---VS 354
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+A +++IDE+D IT K E S+D+ V Q L M + AA ++V
Sbjct: 355 SAPC-ILFIDEIDAITPKREIA--SKDMERRIVAQLLTCM---DDLNNVAATARV 403
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKT+L K +A F+ + + Q Y+GE + + A N
Sbjct: 203 VLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQK-YLGEGPRMVR-DVFRMARENSP 260
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G E K A ++
Sbjct: 261 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRAD 316
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D ++ LD K +P
Sbjct: 317 TLDPALLRPGRLDRKIEFP 335
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVN--VPFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
+LL GP G+GKTL+A+ + + +N P V++ + L + YVG+ E+I L AE
Sbjct: 260 MLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNK--YVGQSEENIRM-LFRDAEIE 316
Query: 386 VEAA--QQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTET 433
+A G+ + DE+D I K S V G+ V LL M++G E+
Sbjct: 317 QKAKGDDSGLHIIIFDELDAICKSRGSRQGDSGV-GDSVVNQLLAMIDGVES 367
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + A + +G GE E L +L QA N
Sbjct: 184 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRELFEQAVSNAP 241
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q L M + AA ++V
Sbjct: 242 C----IIFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNNVAATARV 287
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L G G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
V+L G G+GKTLLAK +A + F+ + L Q Y+G D ++ +L AE E
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 388 AAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEGTET----KTFAAVSKV 442
A +V+IDE+D I TK+ +S N + + LL L+G ++ K A +++
Sbjct: 277 HAPS-IVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
Query: 443 SR-DNLYIKTSGLDSKTLWP 461
D I+ +D K +P
Sbjct: 335 ETLDPALIRPGRIDRKIEFP 354
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 43/134 (32%), Positives = 64/134 (47%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
LL+GP G GKTLLAK +A VPF+ + + +G + + L +A+ A
Sbjct: 319 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEV--IGGLGAARVRSLFREAQ----A 372
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ--QALLKMLEGTETKTFAAV-SKVSR- 444
+VYIDE+D + KK S N+S + E Q LL ++G T V + +R
Sbjct: 373 RAPCIVYIDEIDAVGKK-RSTNVSGFANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRA 431
Query: 445 ---DNLYIKTSGLD 455
DN ++ LD
Sbjct: 432 DVLDNALMRPGRLD 445
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + + +VG + L A A N
Sbjct: 189 ILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM-FVGVGPARVR-DLFALARKNAPC 246
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 247 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 289
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV- 386
V+L G G+GKTLLAK +A + F+ + L Q Y+G+ +L+ Q FN
Sbjct: 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLGDGP-----RLVRQL-FNAA 280
Query: 387 EAAQQGMVYIDEVDKI-TKKAESLN-ISRDVSGEGVQQALLKMLEGTET-----KTFAAV 439
E +V+IDE+D I TK+ ++ + R++ ++ LL L+G +T K A
Sbjct: 281 EEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE--LLNQLDGFDTSQRDIKVIMAT 338
Query: 440 SKVSR-DNLYIKTSGLDSKTLW 460
+++S D I+ +D K L+
Sbjct: 339 NRISDLDPALIRPGRIDRKILF 360
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 119 (46.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 428
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 429 ELQPSIIFIDEVDSL 443
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 93 SNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
++P+ PP PA + G P+ ++ YYF
Sbjct: 16 ASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYF 51
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 157 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 210
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G T+
Sbjct: 211 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNTQ 269
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLD 455
K AA ++V D +++ LD
Sbjct: 270 VKVIAATNRVDILDPALLRSGRLD 293
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE + +L A
Sbjct: 163 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVR-ELFVMAR 220
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG-VQQALLKML 428
E A ++++DE+D I S + G+ VQ+ +L++L
Sbjct: 221 ---EHAPS-IIFMDEIDSIG----SSRLEGGSGGDSEVQRTMLELL 258
>UNIPROTKB|B7PXE3 [details] [associations]
symbol:spas "Spastin" species:6945 "Ixodes scapularis"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005815 Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0051013 GO:GO:0005874 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA EMBL:DS813618
RefSeq:XP_002400359.1 EnsemblMetazoa:ISCW020482-RA GeneID:8032764
KEGG:isc:IscW_ISCW020482 VectorBase:ISCW020482 CTD:8032764
PhylomeDB:B7PXE3 Uniprot:B7PXE3
Length = 648
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F+ A +LT YVGE E ++ L A A
Sbjct: 410 LLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSK-YVGEG-EKLVRALFAVAR---- 463
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 464 ELQPSIIFIDEVDSL 478
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP GSGKTL+A+ +A F + + + GE ES L K +AE N
Sbjct: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 302
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
+ +++IDE+D I K E + +V V Q LL +++G +++ V +R N
Sbjct: 303 S----IIFIDEIDSIAPKREKTH--GEVERRIVSQ-LLTLMDGLKSRAHVIVMGATNRPN 355
>UNIPROTKB|J3QRR3 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
Length = 127
Score = 95 (38.5 bits), Expect = 0.00050, P = 0.00050
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ VLL GP G+GKTLLA+ +A H + F+ + L Q ++GE
Sbjct: 37 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGE 81
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKT +A LA + VPF+ A ++ +G GE E L ++ +A+ +
Sbjct: 230 VLLYGPPGCGKTTIANALAGELKVPFINISAPSVV-SGMSGES-EKKLREIFEEAK---Q 284
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
A ++++DE+D IT K + R++ V Q L M E T KT
Sbjct: 285 IAPC-LIFMDEIDAITPKRDG-GAQREMEKRIVAQLLTLMDELTLEKT 330
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKT +A LA + VPF+ A ++ +G GE E L ++ +A+ +
Sbjct: 230 VLLYGPPGCGKTTIANALAGELKVPFINISAPSVV-SGMSGES-EKKLREIFEEAK---Q 284
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
A ++++DE+D IT K + R++ V Q L M E T KT
Sbjct: 285 IAPC-LIFMDEIDAITPKRDG-GAQREMEKRIVAQLLTLMDELTLEKT 330
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP GSGKT +A+ +A F + + + + GE E+ L + +AE N
Sbjct: 244 VLLYGPPGSGKTCIARAVANETGAFFFLINGPEV-MSKMAGE-AEANLRRAFEEAEKNSP 301
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETK-TFAAVSKVSRDN 446
A +++IDE+D I K E N +V V Q LL +++G +++ ++ +R N
Sbjct: 302 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDGIKSRGQVVVIAATNRQN 354
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP GSGKT +A+ +A F + + + + GE E+ L + +AE N
Sbjct: 244 VLLYGPPGSGKTCIARAVANETGAFFFLINGPEV-MSKMAGE-AEANLRRAFEEAEKNSP 301
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETK-TFAAVSKVSRDN 446
A +++IDE+D I K E N +V V Q LL +++G +++ ++ +R N
Sbjct: 302 A----IIFIDEIDSIAPKREKTN--GEVERRVVSQ-LLTLMDGIKSRGQVVVIAATNRQN 354
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 197 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 250
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G +
Sbjct: 251 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNMQ 309
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 310 VKVIAATNRVDILDPALLRSGRLDRKIEFP 339
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 42/115 (36%), Positives = 58/115 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + A + +G GE E L +L QA N
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRELFDQAVSNAP 357
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+V+IDE+D IT K E S+D+ V Q L M + AA ++V
Sbjct: 358 C----IVFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNNVAATARV 403
>ZFIN|ZDB-GENE-050522-514 [details] [associations]
symbol:katna1 "katanin p60 (ATPase-containing)
subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
"midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
UniGene:Dr.78566 ProteinModelPortal:Q5RII9
Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
Uniprot:Q5RII9
Length = 485
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 240 VLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYAP 297
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
++IDE+D I + +E SR V E
Sbjct: 298 TT----IFIDEIDSICSRRGTSEEHEASRRVKAE 327
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 246 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYAP 303
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
++IDE+D I + +E SR V E
Sbjct: 304 TT----IFIDEIDSICSRRGTSEEHEASRRVKAE 333
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 319 DNVELEK-SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+N+ ++ VL+ GP G+GKTLLA+ A F+ L Q ++G+ K
Sbjct: 201 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM-FIGDGA-----K 254
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG----TE 432
L+ A + +++IDE+D I TK+ +S D + LL L+G +
Sbjct: 255 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFQPNMQ 313
Query: 433 TKTFAAVSKVS-RDNLYIKTSGLDSKTLWP 461
K AA ++V D +++ LD K +P
Sbjct: 314 VKVIAATNRVDILDPALLRSGRLDRKIEFP 343
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
L +S +LL GP G+GKTLLAK +A ++ F+ L YVG+ E++ ++ A+A
Sbjct: 724 LRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEENVR-EVFARA 781
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSG--EGVQQALLKMLEGTE-TKTFAAV 439
AA +++ DE+D + A S S D G + V LL L+G T+ +
Sbjct: 782 R----AAAPCIIFFDELDSL---APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVI 834
Query: 440 SKVSRDNL 447
+R +L
Sbjct: 835 GATNRPDL 842
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTLLA+ +A ++N F+ + + Y+GE I+ ++ A+ +
Sbjct: 174 VLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDK-YIGESAR-IIREMFNYAKEH-- 229
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
Q ++++DE+D I + S S D + LL L+G E
Sbjct: 230 --QPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFE 272
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G+GKTLLA+ +A ++N F+ + + Y+GE I+ ++ A+ +
Sbjct: 174 VLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDK-YIGESAR-IIREMFNYAKEH-- 229
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE 432
Q ++++DE+D I + S S D + LL L+G E
Sbjct: 230 --QPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFE 272
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + + +VG + L A A N
Sbjct: 345 ILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM-FVGVGPARVR-DLFALARKNAPC 402
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 403 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 445
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 243 ILLYGPPGTGKTLVARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 300
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 301 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVVVMAATNRPN 353
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 298
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 299 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 351
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K + E N
Sbjct: 247 ILLFGPPGTGKTLIARAVANETGSFFFLINGPEV-MSKMSGES-ESNLRKAFEECEKN-- 302
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FAAVSKVSRDN 446
Q +++IDE+D I K E N +V V Q LL +++G + ++ ++ +R N
Sbjct: 303 --QPAILFIDEIDAIAPKREKTN--GEVERRIVSQ-LLTLMDGVKGRSNLVVIAATNRPN 357
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K + E N
Sbjct: 247 ILLFGPPGTGKTLIARAVANETGSFFFLINGPEV-MSKMSGES-ESNLRKAFEECEKN-- 302
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FAAVSKVSRDN 446
Q +++IDE+D I K E N +V V Q LL +++G + ++ ++ +R N
Sbjct: 303 --QPAILFIDEIDAIAPKREKTN--GEVERRIVSQ-LLTLMDGVKGRSNLVVIAATNRPN 357
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTL+A+ +A F + + + + GE ES L K +AE N
Sbjct: 257 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEAEKNAP 314
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAV-SKVSRDN 446
A +++IDE+D I K E + +V V Q LL +++G + + V + +R N
Sbjct: 315 A----IIFIDELDAIAPKREKTH--GEVERRIVSQ-LLTLMDGLKQRAHVIVMAATNRPN 367
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+L+ GP G+GKT++A+ +A F + + + + GE ES L K +AE N
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKN-- 307
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FAAVSKVSRDN 446
+++IDE+D I K + N +V V Q LL +++G + ++ ++ +R N
Sbjct: 308 --SPSIIFIDEIDSIAPKRDKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVIAATNRPN 362
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+L+ GP G+GKT++A+ +A F + + + + GE ES L K +AE N
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFLINGPEI-MSKMAGES-ESNLRKAFEEAEKN-- 307
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT-FAAVSKVSRDN 446
+++IDE+D I K + N +V V Q LL +++G + ++ ++ +R N
Sbjct: 308 --SPSIIFIDEIDSIAPKRDKTN--GEVERRVVSQ-LLTLMDGMKARSNVVVIAATNRPN 362
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 38/108 (35%), Positives = 53/108 (49%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKT +A LA + VPF+ A ++ +G GE E + L +A
Sbjct: 242 VLLHGPPGCGKTSIANALAGELQVPFISISAPSVV-SGMSGES-EKKIRDLFDEAR---- 295
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+ +V+ DE+D IT K + R++ V Q L M E T KT
Sbjct: 296 SLAPCLVFFDEIDAITPKRDG-GAQREMERRIVAQLLTSMDELTMEKT 342
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 118 (46.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 34/103 (33%), Positives = 53/103 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKT+LAK +A F ++TLT Y GE E ++ L A F
Sbjct: 243 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYAP 300
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
A ++IDE+D I + + + + S V+ LL ++G
Sbjct: 301 AT----IFIDEIDSICSRRGTSD-EHEASRR-VKSELLVQMDG 337
Score = 41 (19.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 70 DTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPA 104
DT + + + D F +P+ PPVPA
Sbjct: 71 DTLESFKMDRPADIPVSYQDEPFRDPAVWPPPVPA 105
>UNIPROTKB|Q9PUL2 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8355 "Xenopus laevis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AF177942
UniGene:Xl.6322 ProteinModelPortal:Q9PUL2 IntAct:Q9PUL2
Xenbase:XB-GENE-995725 Uniprot:Q9PUL2
Length = 486
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 242 VLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSK-YRGES-EKLVRLLFEMARFYAP 299
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
++IDE+D I + +E SR V E
Sbjct: 300 TT----IFIDEIDSICSRRGTSEEHEASRRVKAE 329
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 43/119 (36%), Positives = 56/119 (47%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + A + +G GE E L L QA N
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRDLFDQAVSNAP 357
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKVSRDN 446
+V+IDE+D IT K E S+D+ V Q L M + A V V N
Sbjct: 358 C----IVFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATARVLVVGATN 410
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGES-EKLVRLLFEMARFYSP 302
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
A ++IDE+D I + +E SR + E
Sbjct: 303 AT----IFIDEIDSICSRRGTSEEHEASRRMKAE 332
>UNIPROTKB|Q0IIR9 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 CTD:11104 EMBL:BC121679
RefSeq:NP_001072433.1 UniGene:Str.53362 ProteinModelPortal:Q0IIR9
GeneID:779887 KEGG:xtr:779887 Xenbase:XB-GENE-995720 Uniprot:Q0IIR9
Length = 492
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL++GP G+GKTLLAK +A F ++TLT Y GE E ++ L A F
Sbjct: 246 VLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSK-YRGES-EKLVRLLFEMARFYAP 303
Query: 388 AAQQGMVYIDEVDKITKK---AESLNISRDVSGE 418
++IDE+D I + +E SR V E
Sbjct: 304 TT----IFIDEIDSICSRRGTSEEHEASRRVKAE 333
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VL+ GP G GKT+LAK +A H F+ + Q Y+GE + + A+ N
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGEGPRMVR-DVFRLAKENAP 259
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTE----TKTFAAVSKVS 443
A +++IDE+D I K D + + LL ++G + K A ++
Sbjct: 260 A----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 444 R-DNLYIKTSGLDSKTLWP 461
D + LD K +P
Sbjct: 316 TLDPALLCPGRLDRKIEFP 334
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 124 (48.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 42/114 (36%), Positives = 60/114 (52%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
LL GP G GKTLLA+ +A + +P + AT + +G GE E L +L QA N
Sbjct: 297 LLHGPPGCGKTLLAQAIAGELELPMLKVAATEMV-SGVSGES-EQKLRELFDQAVLNAPC 354
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q LL L+ + AA ++V
Sbjct: 355 ----VLFIDEIDAITPKREVA--SKDMERRIVAQ-LLTCLD--DLNNVAATAQV 399
Score = 40 (19.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 275 VIGQEKAKKVLSVAVYNHY-KRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNV 328
+I EK K+ L+ H KR H + K+ T + D+D +L +++
Sbjct: 65 IISNEKKKEDLTALEAEHLAKRARHEH-KRNETTGSSTEDSEDDDYPEDLSTNHM 118
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + +VG + L A A N
Sbjct: 345 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFALARKNAPC 402
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 403 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 445
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + +VG + L A A N
Sbjct: 344 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFALARKNAPC 401
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 402 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 444
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + +VG + L A A N
Sbjct: 344 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFALARKNAPC 401
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 402 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 444
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + +VG + L A A N
Sbjct: 346 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFALARKNAPC 403
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 404 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 446
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 329 LLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEA 388
+L GP G+GKTLLAK A NVPF+ + + +VG + L A A N
Sbjct: 346 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFALARKNAPC 403
Query: 389 AQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKT 435
+++IDE+D + +K N E LL ++G T T
Sbjct: 404 ----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT 446
>WB|WBGene00010557 [details] [associations]
symbol:mspn-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0040007 GO:GO:0002119
GO:GO:0005741 GO:GO:0010171 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 EMBL:Z69664
PIR:T23311 RefSeq:NP_501860.1 RefSeq:NP_501861.1 UniGene:Cel.22858
ProteinModelPortal:P54815 SMR:P54815 IntAct:P54815
MINT:MINT-1100399 STRING:P54815 PaxDb:P54815 PRIDE:P54815
EnsemblMetazoa:K04D7.2a.1 EnsemblMetazoa:K04D7.2a.2 GeneID:177896
KEGG:cel:CELE_K04D7.2 UCSC:K04D7.2a CTD:177896 WormBase:K04D7.2a
WormBase:K04D7.2b InParanoid:P54815 OMA:GDQIIVM NextBio:898840
Uniprot:P54815
Length = 342
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV- 386
+LL GP G GKTLLAK +AR F+ + LT Y GE + LA A F+V
Sbjct: 120 ILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWY-GESQK------LAAAVFSVA 172
Query: 387 EAAQQGMVYIDEVDKITKKAES 408
+ Q +++IDE+D + +S
Sbjct: 173 QKFQPTIIFIDEIDSFLRDRQS 194
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 121 (47.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 41/115 (35%), Positives = 58/115 (50%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
VLL GP G GKTLLA +A +++P + A + +G GE E L +L QA N
Sbjct: 301 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV-SGVSGES-EQKLRELFEQAVSNAP 358
Query: 388 AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTETKTFAAVSKV 442
+++IDE+D IT K E S+D+ V Q L M + AA ++V
Sbjct: 359 C----IIFIDEIDAITPKREVA--SKDMERRIVAQLLTCM---DDLNNVAATARV 404
Score = 43 (20.2 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 99 SPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
S P+ PA D GG+ ++ P+ K +F
Sbjct: 159 SIPLKTPAKDSEGGW-FIDKTPSVKKDSFF 187
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 119 (46.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 354 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 407
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 408 ELQPSIIFIDEVDSL 422
Score = 41 (19.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N V G TG SG
Sbjct: 187 VYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSG 238
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 119 (46.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 362 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 415
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 416 ELQPSIIFIDEVDSL 430
Score = 41 (19.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N V G TG SG
Sbjct: 195 VYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSG 246
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 119 (46.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGEG-EKLVRALFAVAR---- 429
Query: 388 AAQQGMVYIDEVDKI 402
Q +++IDEVD +
Sbjct: 430 ELQPSIIFIDEVDSL 444
Score = 41 (19.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 289 VYNHYKRIYHAN--LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTG-SG 337
VYN + N L+ SGA PK + + N VL G G SG
Sbjct: 209 VYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSG 260
>FB|FBgn0039141 [details] [associations]
symbol:spas "spastin" species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0031117 "positive regulation of
microtubule depolymerization" evidence=IDA;IMP] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IMP]
[GO:0048167 "regulation of synaptic plasticity" evidence=TAS]
[GO:0019226 "transmission of nerve impulse" evidence=TAS]
[GO:0051013 "microtubule severing" evidence=IDA;IMP] [GO:0000070
"mitotic sister chromatid segregation" evidence=IMP] [GO:0008568
"microtubule-severing ATPase activity" evidence=IMP] [GO:0005813
"centrosome" evidence=IDA] [GO:0005694 "chromosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0035099
"hemocyte migration" evidence=IMP] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE014297
GO:GO:0016021 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0005694 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0043195 GO:GO:0007626 GO:GO:0000070 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0035099
GeneTree:ENSGT00570000078874 GO:GO:0036078 GO:GO:0000091
GO:GO:0031117 KO:K13254 OrthoDB:EOG44XGXW HAMAP:MF_03021
OMA:FLNISAA EMBL:AY069522 EMBL:BT001254 EMBL:BT001351 EMBL:BT044258
RefSeq:NP_651206.3 RefSeq:NP_732941.2 UniGene:Dm.7035 PDB:3B9P
PDBsum:3B9P ProteinModelPortal:Q8I0P1 SMR:Q8I0P1 DIP:DIP-59834N
MINT:MINT-825923 STRING:Q8I0P1 PaxDb:Q8I0P1
EnsemblMetazoa:FBtr0084533 EnsemblMetazoa:FBtr0084534 GeneID:42846
KEGG:dme:Dmel_CG5977 CTD:42846 FlyBase:FBgn0039141
InParanoid:Q8T066 PhylomeDB:Q8I0P1 EvolutionaryTrace:Q8I0P1
GenomeRNAi:42846 NextBio:830886 Bgee:Q8I0P1 Uniprot:Q8I0P1
Length = 758
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTLLA+ +A + F+ A +LT YVG D E ++ L A A
Sbjct: 519 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVARH--- 573
Query: 388 AAQQGMVYIDEVDKITKKAES 408
Q +++IDEVD + + S
Sbjct: 574 -MQPSIIFIDEVDSLLSERSS 593
>UNIPROTKB|B3P8A3 [details] [associations]
symbol:spas "Spastin" species:7220 "Drosophila erecta"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH954182 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001982057.1
EnsemblMetazoa:FBtr0131301 GeneID:6555002 KEGG:der:Dere_GG11247
FlyBase:FBgn0103548 Uniprot:B3P8A3
Length = 758
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTLLA+ +A + F+ A +LT YVG D E ++ L A A
Sbjct: 519 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVARH--- 573
Query: 388 AAQQGMVYIDEVDKITKKAES 408
Q +++IDEVD + + S
Sbjct: 574 -MQPSIIFIDEVDSLLSERSS 593
>UNIPROTKB|B4HGG6 [details] [associations]
symbol:spas "Spastin" species:7238 "Drosophila sechellia"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH480815 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002032433.1
EnsemblMetazoa:FBtr0209536 GeneID:6607668 KEGG:dse:Dsec_GM26551
FlyBase:FBgn0181404 Uniprot:B4HGG6
Length = 758
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 328 VLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVE 387
+LL GP G+GKTLLA+ +A + F+ A +LT YVG D E ++ L A A
Sbjct: 519 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVARH--- 573
Query: 388 AAQQGMVYIDEVDKITKKAES 408
Q +++IDEVD + + S
Sbjct: 574 -MQPSIIFIDEVDSLLSERSS 593
WARNING: HSPs involving 4 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 461 394 0.00095 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 254
No. of states in DFA: 614 (65 KB)
Total size of DFA: 241 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.72u 0.11s 33.83t Elapsed: 00:00:02
Total cpu time: 33.75u 0.11s 33.86t Elapsed: 00:00:02
Start: Mon May 20 22:07:07 2013 End: Mon May 20 22:07:09 2013
WARNINGS ISSUED: 2