BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012525
(461 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0JL96|CLPX_MICAN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Microcystis
aeruginosa (strain NIES-843) GN=clpX PE=3 SV=1
Length = 444
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 141/173 (81%), Gaps = 8/173 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGT 238
>sp|Q2JW64|CLPX_SYNJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpX PE=3 SV=1
Length = 448
Score = 225 bits (573), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 143/171 (83%), Gaps = 8/171 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + A + D+
Sbjct: 79 LPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPNSLGAAELDE- 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGT 241
>sp|B7KBH7|CLPX_CYAP7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 7424) GN=clpX PE=3 SV=1
Length = 447
Score = 224 bits (572), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 146/177 (82%), Gaps = 11/177 (6%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAA 314
+LG+ +P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+GA
Sbjct: 76 SLGQ-IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKRTGTGA------- 127
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 128 --TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENI 185
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 186 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGT 242
>sp|Q8XYP6|CLPX_RALSO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ralstonia
solanacearum (strain GMI1000) GN=clpX PE=3 SV=1
Length = 424
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 143/182 (78%), Gaps = 16/182 (8%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GT 431
GT
Sbjct: 220 GT 221
>sp|B2UFQ3|CLPX_RALPJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ralstonia
pickettii (strain 12J) GN=clpX PE=3 SV=1
Length = 424
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 143/182 (78%), Gaps = 16/182 (8%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVE 219
Query: 430 GT 431
GT
Sbjct: 220 GT 221
>sp|A5WC69|CLPX_PSYWF ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Psychrobacter sp. (strain PRwf-1) GN=clpX PE=3 SV=1
Length = 425
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 144/176 (81%), Gaps = 5/176 (2%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LPTPKEI + LD +VIGQE AKK LSVAVYNHYKR+ A AE K A +
Sbjct: 61 LTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVA----AKLAEDKKQAKLG 116
Query: 317 NDD-NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
DD VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 117 ADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDVENIV 176
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
KLL A+++VE A+QG++Y+DE+DKI+KK E+++I+RDVSGEGVQQALLK++EGT
Sbjct: 177 QKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEGT 232
>sp|Q472D2|CLPX_CUPPJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=clpX PE=3
SV=1
Length = 425
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|Q21KA8|CLPX_SACD2 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=clpX PE=3 SV=1
Length = 431
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 144/174 (82%), Gaps = 13/174 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI + LD++VIGQ++AKKVL+VAVYNHYKR+ + KK
Sbjct: 63 GDKLPTPQEISETLDEYVIGQKQAKKVLAVAVYNHYKRLRVGDKKKSK------------ 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 -DDVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 223
>sp|Q47FB7|CLPX_DECAR ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dechloromonas aromatica (strain RCB) GN=clpX PE=3
SV=1
Length = 420
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 15/172 (8%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 216
>sp|Q63V40|CLPX_BURPS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain K96243) GN=clpX PE=3 SV=2
Length = 423
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A3NAI4|CLPX_BURP6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain 668) GN=clpX PE=3 SV=1
Length = 423
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A3NWA5|CLPX_BURP0 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain 1106a) GN=clpX PE=3 SV=1
Length = 423
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q0KBK3|CLPX_CUPNH ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cupriavidus
necator (strain ATCC 17699 / H16 / DSM 428 / Stanier
337) GN=clpX PE=3 SV=1
Length = 425
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|B3R4W2|CLPX_CUPTR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=clpX PE=3 SV=1
Length = 425
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|Q6A7F1|CLPX_PROAC ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Propionibacterium acnes (strain KPA171202 / DSM
16379) GN=clpX PE=3 SV=1
Length = 429
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 141/174 (81%), Gaps = 10/174 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY-HANLKKGSGAEPKTAAAVDN 317
EDLP P+E+C+ LD +VIGQE+AK+ LSVAVYNHYKRI AN+ + AE
Sbjct: 60 EDLPRPRELCEFLDAWVIGQEEAKRTLSVAVYNHYKRIQSEANVPRARRAE--------- 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
DD VEL KSN+L++GPTG GKT LA+T+AR +NVPF +ADAT LT+AGYVGEDVE+IL K
Sbjct: 111 DDGVELGKSNILMLGPTGCGKTYLAQTMARQLNVPFAMADATALTEAGYVGEDVENILLK 170
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
LL A+F+V+ A++G+VYIDE+DK+ +KAE+ +I+RDVSGEGVQQALLK+LEGT
Sbjct: 171 LLQAADFDVKRAERGIVYIDEIDKVARKAENPSITRDVSGEGVQQALLKILEGT 224
>sp|Q2JLU2|CLPX_SYNJB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=clpX
PE=3 SV=1
Length = 448
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 141/171 (82%), Gaps = 8/171 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + V D
Sbjct: 79 LPKPQEIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPGSVG-VSELDE 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILIIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGT 241
>sp|A4G5X0|CLPX_HERAR ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Herminiimonas arsenicoxydans GN=clpX PE=3 SV=1
Length = 422
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNSAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
>sp|B9MQ33|CLPX_CALBD ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 /
DSM 6725 / Z-1320) GN=clpX PE=3 SV=1
Length = 433
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 142/171 (83%), Gaps = 15/171 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ N KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHNTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGT
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGT 216
>sp|B2JGL6|CLPX_BURP8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 144/187 (77%), Gaps = 18/187 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGLETGLSK--SDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGT 431
LK++EGT
Sbjct: 214 LKLVEGT 220
>sp|A4JF04|CLPX_BURVG ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q1LM63|CLPX_RALME ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=clpX PE=3 SV=1
Length = 425
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ++AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQDQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|A6SY75|CLPX_JANMA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Janthinobacterium sp. (strain Marseille) GN=clpX PE=3
SV=1
Length = 422
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNPAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
>sp|Q39FE9|CLPX_BURS3 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
sp. (strain 383) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|B4EBM2|CLPX_BURCJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
cepacia (strain J2315 / LMG 16656) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A0K846|CLPX_BURCH ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
cenocepacia (strain HI2424) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|B1JTU9|CLPX_BURCC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
cenocepacia (strain MC0-3) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q1BH84|CLPX_BURCA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
cenocepacia (strain AU 1054) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q2SWQ5|CLPX_BURTA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q0BEF7|CLPX_BURCM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
ambifaria (strain ATCC BAA-244 / AMMD) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|B1YRZ4|CLPX_BURA4 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
ambifaria (strain MC40-6) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A1K782|CLPX_AZOSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Azoarcus sp.
(strain BH72) GN=clpX PE=3 SV=1
Length = 422
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 141/171 (82%), Gaps = 15/171 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQ +AK+ LSVAVYNHYKR+ H SG + D
Sbjct: 64 LPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHL-----SGRQ----------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
>sp|A9AJR1|CLPX_BURM1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
multivorans (strain ATCC 17616 / 249) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q13Z14|CLPX_BURXL ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
xenovorans (strain LB400) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 144/187 (77%), Gaps = 18/187 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGT 431
LK++EGT
Sbjct: 214 LKLVEGT 220
>sp|B2T404|CLPX_BURPP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=clpX PE=3 SV=1
Length = 423
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 144/187 (77%), Gaps = 18/187 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGT 431
LK++EGT
Sbjct: 214 LKLVEGT 220
>sp|A1V4X0|CLPX_BURMS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain SAVP1) GN=clpX PE=3 SV=1
Length = 423
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q62JK8|CLPX_BURMA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain ATCC 23344) GN=clpX PE=3 SV=1
Length = 423
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A2SBG4|CLPX_BURM9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain NCTC 10229) GN=clpX PE=3 SV=1
Length = 423
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|A3MKJ7|CLPX_BURM7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain NCTC 10247) GN=clpX PE=3 SV=1
Length = 423
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 139/172 (80%), Gaps = 16/172 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGT 220
>sp|Q0AJI3|CLPX_NITEC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrosomonas
eutropha (strain C91) GN=clpX PE=3 SV=1
Length = 427
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 141/171 (82%), Gaps = 12/171 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQE AKK+LSVAVYNHYKR+ NL K + D+
Sbjct: 63 LPTPHEICETLDQYVIGQESAKKILSVAVYNHYKRLR--NLSKVNAG----------SDD 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 IELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 171 ASNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|Q82Y56|CLPX_NITEU ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=clpX PE=3
SV=1
Length = 426
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 141/171 (82%), Gaps = 13/171 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD++VIGQE AKK+LSVAVYNHYKR+ K + V+N D+
Sbjct: 63 LPTPHEIRETLDQYVIGQESAKKILSVAVYNHYKRL-------------KNLSKVNNGDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 KCNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 220
>sp|Q7NUZ0|CLPX_CHRVO ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=clpX PE=3 SV=1
Length = 426
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 146/186 (78%), Gaps = 16/186 (8%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G GG GG++ LPTP+EI LD+++IGQ+ AKK LSVAVYNHYKR+Y+ K
Sbjct: 53 GTGGEVIGGASADHPLPTPQEIRADLDQYIIGQDFAKKTLSVAVYNHYKRLYNKGGK--- 109
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
D+VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AG
Sbjct: 110 -------------DDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAG 156
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE I+ KLL + +++V+ AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALL
Sbjct: 157 YVGEDVEHIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALL 216
Query: 426 KMLEGT 431
K++EGT
Sbjct: 217 KLIEGT 222
>sp|Q1GGF7|CLPX_RUEST ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria sp.
(strain TM1040) GN=clpX PE=3 SV=1
Length = 421
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 144/182 (79%), Gaps = 15/182 (8%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GT 431
GT
Sbjct: 217 GT 218
>sp|Q215J1|CLPX_RHOPB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisB18) GN=clpX
PE=3 SV=1
Length = 424
Score = 221 bits (563), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 138/171 (80%), Gaps = 16/171 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 217
>sp|Q07NN5|CLPX_RHOP5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisA53) GN=clpX
PE=3 SV=1
Length = 424
Score = 221 bits (563), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 138/171 (80%), Gaps = 16/171 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 217
>sp|Q5LUP9|CLPX_RUEPO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=clpX PE=3 SV=1
Length = 424
Score = 221 bits (563), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 139/171 (81%), Gaps = 15/171 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGT 220
>sp|B8GNT9|CLPX_THISH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=clpX PE=3
SV=1
Length = 425
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 142/178 (79%), Gaps = 16/178 (8%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ +G+ LP P EI K LD++VIGQ++AKK+L+VAVYNHYKR+ N K
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 107 -----DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGT 219
>sp|Q5NH46|CLPX_FRATT ATP-dependent Clp protease ATP-binding subunit ClpX OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=clpX PE=3 SV=1
Length = 417
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 146/205 (71%), Gaps = 20/205 (9%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGT 431
ES +I+RDVSGEGVQQALLK++EGT
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGT 211
>sp|C5CJT5|CLPX_VARPS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Variovorax
paradoxus (strain S110) GN=clpX PE=3 SV=1
Length = 421
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 137/172 (79%), Gaps = 14/172 (8%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 221
>sp|B3Q7P4|CLPX_RHOPT ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX
PE=3 SV=1
Length = 424
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 138/171 (80%), Gaps = 16/171 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 217
>sp|Q6N5L4|CLPX_RHOPA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=clpX PE=3 SV=1
Length = 424
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 138/171 (80%), Gaps = 16/171 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,370,020
Number of Sequences: 539616
Number of extensions: 9952959
Number of successful extensions: 178855
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2989
Number of HSP's successfully gapped in prelim test: 1581
Number of HSP's that attempted gapping in prelim test: 93381
Number of HSP's gapped (non-prelim): 35423
length of query: 461
length of database: 191,569,459
effective HSP length: 121
effective length of query: 340
effective length of database: 126,275,923
effective search space: 42933813820
effective search space used: 42933813820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)